BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038249
(281 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/266 (67%), Positives = 216/266 (81%), Gaps = 3/266 (1%)
Query: 10 KKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
K++WTL DFDIG+PLG+GKFG+VYLARE++S I+ALKVLFK+QL+++ VEHQLRREVEI
Sbjct: 6 KRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARAL 129
QSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA AL
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVESV 188
YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR T+CGTLDYLPPEM+E
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
HD VD+WSLGVLCYEFL G+PPFEA + +TYRRI +V+ FP V+ A+DLIS+
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP--DFVTEGARDLISR 243
Query: 249 MLVKDSSQRLPLHKLLEHPWIIQNAD 274
+L ++SQRL L ++LEHPWI N+
Sbjct: 244 LLKHNASQRLTLAEVLEHPWIKANSS 269
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/265 (67%), Positives = 216/265 (81%), Gaps = 3/265 (1%)
Query: 10 KKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
K++WTL DFDIG+PLG+GKFG+VYLARE++S I+ALKVLFK+QL+++ VEHQLRREVEI
Sbjct: 6 KRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARAL 129
QSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA AL
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVESV 188
YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR T+CGTLDYLPPEM+E
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGR 185
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
HD VD+WSLGVLCYEFL G+PPFEA + +TYRRI +V+ FP V+ A+DLIS+
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP--DFVTEGARDLISR 243
Query: 249 MLVKDSSQRLPLHKLLEHPWIIQNA 273
+L ++SQRL L ++LEHPWI N+
Sbjct: 244 LLKHNASQRLTLAEVLEHPWIKANS 268
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/267 (66%), Positives = 215/267 (80%), Gaps = 3/267 (1%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
+K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
IQSHLRHPNILRLYGYF+D RVYLILEYA +GE+YKELQK F E+R ATY+ LA A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANA 125
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVES 187
L YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR T+CGTLDYLPPEM+E
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 185
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLIS 243
Query: 248 QMLVKDSSQRLPLHKLLEHPWIIQNAD 274
++L + SQR L ++LEHPWI N+
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANSS 270
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 174/272 (63%), Positives = 222/272 (81%), Gaps = 3/272 (1%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQ 62
+ ++ K+++T++DFDIG+PLG+GKFG+VYLAREK++ I+ALKVLFKSQL++ VEHQ
Sbjct: 2 TALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 61
Query: 63 LRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYV 122
LRRE+EIQSHLRHPNILR+Y YF+D+KR+YL+LE+A +GELYKELQK F E+R+AT++
Sbjct: 62 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 121
Query: 123 ASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFN-RRRTMCGTLDYLP 181
LA AL YCH + VIHRDIKPENLL+G +GELKIADFGWSVH + RRR MCGTLDYLP
Sbjct: 122 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLP 181
Query: 182 PEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA 241
PEM+E HD VD+W GVLCYEFL G+PPF++ H++T+RRIV VDLKFP P +S
Sbjct: 182 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP--PFLSDG 239
Query: 242 AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
+KDLIS++L QRLPL ++EHPW+ N+
Sbjct: 240 SKDLISKLLRYHPPQRLPLKGVMEHPWVKANS 271
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/266 (66%), Positives = 213/266 (80%), Gaps = 3/266 (1%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
+K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVE
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 77
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
IQSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA A
Sbjct: 78 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 137
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVES 187
L YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR T+CGTLDYLPPEM+E
Sbjct: 138 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 197
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS
Sbjct: 198 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLIS 255
Query: 248 QMLVKDSSQRLPLHKLLEHPWIIQNA 273
++L + SQR L ++LEHPWI N+
Sbjct: 256 RLLKHNPSQRPMLREVLEHPWITANS 281
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/267 (65%), Positives = 213/267 (79%), Gaps = 3/267 (1%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
+K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVE
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
IQSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA A
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 146
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVES 187
L YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR T+CGTLDYLPPEM+E
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 206
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLIS 264
Query: 248 QMLVKDSSQRLPLHKLLEHPWIIQNAD 274
++L + SQR L ++LEHPWI N+
Sbjct: 265 RLLKHNPSQRPMLREVLEHPWITANSS 291
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 174/272 (63%), Positives = 222/272 (81%), Gaps = 3/272 (1%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQ 62
+ ++ K+++T++DFDIG+PLG+GKFG+VYLAREK++ I+ALKVLFKSQL++ VEHQ
Sbjct: 1 TALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 60
Query: 63 LRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYV 122
LRRE+EIQSHLRHPNILR+Y YF+D+KR+YL+LE+A +GELYKELQK F E+R+AT++
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 120
Query: 123 ASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFN-RRRTMCGTLDYLP 181
LA AL YCH + VIHRDIKPENLL+G +GELKIADFGWSVH + RRR MCGTLDYLP
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLP 180
Query: 182 PEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA 241
PEM+E HD VD+W GVLCYEFL G+PPF++ H++T+RRIV VDLKFP P +S
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP--PFLSDG 238
Query: 242 AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
+KDLIS++L QRLPL ++EHPW+ N+
Sbjct: 239 SKDLISKLLRYHPPQRLPLKGVMEHPWVKANS 270
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/267 (65%), Positives = 213/267 (79%), Gaps = 3/267 (1%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
+K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
IQSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVES 187
L YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR T+CGTLDYLPPEM+E
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 185
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLIS 243
Query: 248 QMLVKDSSQRLPLHKLLEHPWIIQNAD 274
++L + SQR L ++LEHPWI N+
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANSS 270
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/267 (65%), Positives = 213/267 (79%), Gaps = 3/267 (1%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
+K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
IQSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVES 187
L YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR T+CGTLDYLPPEM+E
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLIS 241
Query: 248 QMLVKDSSQRLPLHKLLEHPWIIQNAD 274
++L + SQR L ++LEHPWI N+
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSS 268
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 370 bits (951), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/266 (66%), Positives = 213/266 (80%), Gaps = 3/266 (1%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
+K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
IQSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVES 187
L YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR T+CGTLDYLPPEM+E
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEG 181
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLIS 239
Query: 248 QMLVKDSSQRLPLHKLLEHPWIIQNA 273
++L + SQR L ++LEHPWI N+
Sbjct: 240 RLLKHNPSQRPMLREVLEHPWITANS 265
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 370 bits (950), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/266 (66%), Positives = 212/266 (79%), Gaps = 3/266 (1%)
Query: 10 KKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVEI
Sbjct: 6 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 65
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARAL 129
QSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA AL
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 125
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVESV 188
YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR T+CGTLDYLPPEM+E
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS+
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLISR 243
Query: 249 MLVKDSSQRLPLHKLLEHPWIIQNAD 274
+L + SQR L ++LEHPWI N+
Sbjct: 244 LLKHNPSQRPMLREVLEHPWITANSS 269
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 370 bits (950), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/266 (66%), Positives = 213/266 (80%), Gaps = 3/266 (1%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
+K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
IQSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVES 187
L YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH + RRT +CGTLDYLPPEM+E
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEG 181
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLIS 239
Query: 248 QMLVKDSSQRLPLHKLLEHPWIIQNA 273
++L + SQR L ++LEHPWI N+
Sbjct: 240 RLLKHNPSQRPMLREVLEHPWITANS 265
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 370 bits (949), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/265 (66%), Positives = 212/265 (80%), Gaps = 3/265 (1%)
Query: 10 KKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVEI
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARAL 129
QSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA AL
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVESV 188
YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH + RRT +CGTLDYLPPEM+E
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLISR 239
Query: 249 MLVKDSSQRLPLHKLLEHPWIIQNA 273
+L + SQR L ++LEHPWI N+
Sbjct: 240 LLKHNPSQRPMLREVLEHPWITANS 264
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 370 bits (949), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/266 (66%), Positives = 213/266 (80%), Gaps = 3/266 (1%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
+K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
IQSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVES 187
L YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH + RRT +CGTLDYLPPEM+E
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEG 185
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLIS 243
Query: 248 QMLVKDSSQRLPLHKLLEHPWIIQNA 273
++L + SQR L ++LEHPWI N+
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANS 269
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 370 bits (949), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/267 (65%), Positives = 213/267 (79%), Gaps = 3/267 (1%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
+K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
IQSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVES 187
L YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR T+CGTLDYLPPEM+E
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLIS 241
Query: 248 QMLVKDSSQRLPLHKLLEHPWIIQNAD 274
++L + SQR L ++LEHPWI N+
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSS 268
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 370 bits (949), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/266 (66%), Positives = 212/266 (79%), Gaps = 3/266 (1%)
Query: 10 KKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVEI
Sbjct: 1 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 60
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARAL 129
QSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA AL
Sbjct: 61 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 120
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVESV 188
YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR T+CGTLDYLPPEM+E
Sbjct: 121 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 180
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS+
Sbjct: 181 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLISR 238
Query: 249 MLVKDSSQRLPLHKLLEHPWIIQNAD 274
+L + SQR L ++LEHPWI N+
Sbjct: 239 LLKHNPSQRPMLREVLEHPWITANSS 264
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 369 bits (948), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/267 (65%), Positives = 213/267 (79%), Gaps = 3/267 (1%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
+K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
IQSHLRHPNILRLYGYF+D RVYLILEYA +GE+YKELQK F E+R ATY+ LA A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANA 125
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVES 187
L YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR + GTLDYLPPEM+E
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEG 185
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLIS 243
Query: 248 QMLVKDSSQRLPLHKLLEHPWIIQNAD 274
++L + SQR L ++LEHPWI N+
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANSS 270
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 369 bits (948), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/266 (66%), Positives = 213/266 (80%), Gaps = 3/266 (1%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
+K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVE
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
IQSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVES 187
L YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH + RRT +CGTLDYLPPEM+E
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEG 180
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLIS 238
Query: 248 QMLVKDSSQRLPLHKLLEHPWIIQNA 273
++L + SQR L ++LEHPWI N+
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANS 264
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/267 (65%), Positives = 213/267 (79%), Gaps = 3/267 (1%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
+K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVE
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
IQSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVES 187
L YCH K VIHRDIKPENLL+G+ GELKIA+FGWSVH +RR T+CGTLDYLPPEM+E
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 182
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLIS 240
Query: 248 QMLVKDSSQRLPLHKLLEHPWIIQNAD 274
++L + SQR L ++LEHPWI N+
Sbjct: 241 RLLKHNPSQRPMLREVLEHPWITANSS 267
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/266 (66%), Positives = 212/266 (79%), Gaps = 3/266 (1%)
Query: 10 KKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVEI
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARAL 129
QSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA AL
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVESV 188
YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH + RRT +CGTLDYLPPEM+E
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGR 181
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLISR 239
Query: 249 MLVKDSSQRLPLHKLLEHPWIIQNAD 274
+L + SQR L ++LEHPWI N+
Sbjct: 240 LLKHNPSQRPMLREVLEHPWITANSS 265
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/265 (66%), Positives = 210/265 (79%), Gaps = 3/265 (1%)
Query: 10 KKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
K++W L DF+IG+PLG+GKFG+VYLAREK S I+ALKVLFK+QL+++ VEHQLRREVEI
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARAL 129
QSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA AL
Sbjct: 62 QSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVESV 188
YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR +CGTLDYLPPEM+E
Sbjct: 122 SYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
HD VD+WSLGVLCYEFL G PPFEA + DTY+RI +V+ FP V+ A+DLIS+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFP--DFVTEGARDLISR 239
Query: 249 MLVKDSSQRLPLHKLLEHPWIIQNA 273
+L + SQR L ++LEHPWI N+
Sbjct: 240 LLKHNPSQRPMLREVLEHPWITANS 264
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/267 (65%), Positives = 213/267 (79%), Gaps = 3/267 (1%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
+K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
IQSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVES 187
L YCH K VIHRDIKPENLL+G+ GELKIA+FGWSVH +RR T+CGTLDYLPPEM+E
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLIS 241
Query: 248 QMLVKDSSQRLPLHKLLEHPWIIQNAD 274
++L + SQR L ++LEHPWI N+
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSS 268
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/266 (65%), Positives = 212/266 (79%), Gaps = 3/266 (1%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
+K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVE
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
IQSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA A
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 146
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVES 187
L YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR +CGTLDYLPPEM+E
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEG 206
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLIS 264
Query: 248 QMLVKDSSQRLPLHKLLEHPWIIQNA 273
++L + SQR L ++LEHPWI N+
Sbjct: 265 RLLKHNPSQRPMLREVLEHPWITANS 290
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/265 (66%), Positives = 211/265 (79%), Gaps = 3/265 (1%)
Query: 11 KRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVEIQ
Sbjct: 3 RQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
SHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA AL
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 131 YCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVESVE 189
YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR T+CGTLDYLPPEM+E
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 182
Query: 190 HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQM 249
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS++
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLISRL 240
Query: 250 LVKDSSQRLPLHKLLEHPWIIQNAD 274
L + SQR L ++LEHPWI N+
Sbjct: 241 LKHNPSQRPMLREVLEHPWITANSS 265
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/267 (65%), Positives = 212/267 (79%), Gaps = 3/267 (1%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
+K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
IQSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVES 187
L YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR T+CGTLDYLPPE +E
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEG 185
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS
Sbjct: 186 RXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLIS 243
Query: 248 QMLVKDSSQRLPLHKLLEHPWIIQNAD 274
++L + SQR L ++LEHPWI N+
Sbjct: 244 RLLKHNPSQRPXLREVLEHPWITANSS 270
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/267 (65%), Positives = 212/267 (79%), Gaps = 3/267 (1%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
+K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVE
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
IQSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVES 187
L YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR +CGTLDYLPPEM+E
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEG 182
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLIS 240
Query: 248 QMLVKDSSQRLPLHKLLEHPWIIQNAD 274
++L + SQR L ++LEHPWI N+
Sbjct: 241 RLLKHNPSQRPMLREVLEHPWITANSS 267
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 173/272 (63%), Positives = 221/272 (81%), Gaps = 3/272 (1%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQ 62
+ ++ K+++T++DFDI +PLG+GKFG+VYLAREK++ I+ALKVLFKSQL++ VEHQ
Sbjct: 1 TALAEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 60
Query: 63 LRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYV 122
LRRE+EIQSHLRHPNILR+Y YF+D+KR+YL+LE+A +GELYKELQK F E+R+AT++
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 120
Query: 123 ASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFN-RRRTMCGTLDYLP 181
LA AL YCH + VIHRDIKPENLL+G +GELKIADFGWSVH + RRR MCGTLDYLP
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLP 180
Query: 182 PEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA 241
PEM+E HD VD+W GVLCYEFL G+PPF++ H++T+RRIV VDLKFP P +S
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP--PFLSDG 238
Query: 242 AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
+KDLIS++L QRLPL ++EHPW+ N+
Sbjct: 239 SKDLISKLLRYHPPQRLPLKGVMEHPWVKANS 270
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/265 (66%), Positives = 211/265 (79%), Gaps = 3/265 (1%)
Query: 11 KRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVEIQ
Sbjct: 3 RQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
SHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA AL
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 131 YCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVESVE 189
YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH + RRT +CGTLDYLPPEM+E
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRM 182
Query: 190 HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQM 249
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS++
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLISRL 240
Query: 250 LVKDSSQRLPLHKLLEHPWIIQNAD 274
L + SQR L ++LEHPWI N+
Sbjct: 241 LKHNPSQRPMLREVLEHPWITANSS 265
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/267 (65%), Positives = 212/267 (79%), Gaps = 3/267 (1%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
+K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
IQSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVES 187
L YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR +CGTLDYLPPEM+E
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEG 183
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLIS 241
Query: 248 QMLVKDSSQRLPLHKLLEHPWIIQNAD 274
++L + SQR L ++LEHPWI N+
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSS 268
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 367 bits (943), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/266 (65%), Positives = 211/266 (79%), Gaps = 3/266 (1%)
Query: 10 KKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVEI
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARAL 129
QSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA AL
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVESV 188
YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR +CGTLDYLPPEM+E
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLISR 239
Query: 249 MLVKDSSQRLPLHKLLEHPWIIQNAD 274
+L + SQR L ++LEHPWI N+
Sbjct: 240 LLKHNPSQRPMLREVLEHPWITANSS 265
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 367 bits (943), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/266 (65%), Positives = 211/266 (79%), Gaps = 3/266 (1%)
Query: 10 KKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVEI
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARAL 129
QSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA AL
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVESV 188
YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR +CGTLDYLPPEM+E
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGR 181
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS+
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLISR 239
Query: 249 MLVKDSSQRLPLHKLLEHPWIIQNAD 274
+L + SQR L ++LEHPWI N+
Sbjct: 240 LLKHNPSQRPMLREVLEHPWITANSS 265
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 367 bits (942), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/270 (64%), Positives = 211/270 (78%), Gaps = 3/270 (1%)
Query: 6 SAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRR 65
A ++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRR
Sbjct: 1 GAMGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 66 EVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASL 125
EVEIQSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 126 ARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEM 184
A AL YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR +CGTLDYLPPEM
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEM 180
Query: 185 VESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKD 244
+E HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+D
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARD 238
Query: 245 LISQMLVKDSSQRLPLHKLLEHPWIIQNAD 274
LIS++L + SQR L ++LEHPWI N+
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWITANSS 268
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/267 (65%), Positives = 211/267 (79%), Gaps = 3/267 (1%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
+K++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
IQSHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVES 187
L YCH K VIHRDIKPENLL+G+ GELKIADFGWS H +RR T+ GTLDYLPPEM+E
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEG 181
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLIS 239
Query: 248 QMLVKDSSQRLPLHKLLEHPWIIQNAD 274
++L + SQR L ++LEHPWI N+
Sbjct: 240 RLLKHNPSQRPMLREVLEHPWITANSS 266
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/264 (65%), Positives = 209/264 (79%), Gaps = 3/264 (1%)
Query: 12 RWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
+W L DF+IG+PLG+GKFG+VYLAREK+ I+ALKVLFK+QL+++ VEHQLRREVEIQS
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 72 HLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIY 131
HLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA AL Y
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 120
Query: 132 CHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVESVEH 190
CH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR T+CGTLDYLPPEM+E H
Sbjct: 121 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 180
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQML 250
D VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS++L
Sbjct: 181 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLISRLL 238
Query: 251 VKDSSQRLPLHKLLEHPWIIQNAD 274
+ SQR L ++LEHPWI N+
Sbjct: 239 KHNPSQRPMLREVLEHPWITANSS 262
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/264 (65%), Positives = 210/264 (79%), Gaps = 3/264 (1%)
Query: 11 KRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
++W L DF+IG+PLG+GKFG+VYLAREK+S I+ALKVLFK+QL+++ VEHQLRREVEIQ
Sbjct: 6 RQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
SHLRHPNILRLYGYF+D RVYLILEYA G +Y+ELQK F E+R ATY+ LA AL
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 131 YCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FNRRRTMCGTLDYLPPEMVESVE 189
YCH K VIHRDIKPENLL+G+ GELKIADFGWSVH +RR +CGTLDYLPPEM+E
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRM 185
Query: 190 HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQM 249
HD VD+WSLGVLCYEFL G PPFEA + +TY+RI +V+ FP V+ A+DLIS++
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLISRL 243
Query: 250 LVKDSSQRLPLHKLLEHPWIIQNA 273
L + SQR L ++LEHPWI N+
Sbjct: 244 LKHNPSQRPMLREVLEHPWITANS 267
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 353 bits (906), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 174/264 (65%), Positives = 218/264 (82%), Gaps = 3/264 (1%)
Query: 11 KRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
+ +T++DF+IG+PLG+GKFG+VYLAREK+S+ IVALKVLFKSQ+++ VEHQLRRE+EIQ
Sbjct: 18 RHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQ 77
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
+HL HPNILRLY YFYD++R+YLILEYA +GELYKELQK F E+R AT + LA AL+
Sbjct: 78 AHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALM 137
Query: 131 YCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFN-RRRTMCGTLDYLPPEMVESVE 189
YCHGK VIHRDIKPENLL+G +GELKIADFGWSVH + RR+TMCGTLDYLPPEM+E
Sbjct: 138 YCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRM 197
Query: 190 HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQM 249
H+ VD+W +GVLCYE L G PPFE+ H++TYRRIV+VDLKFP V + A+DLIS++
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPAS--VPTGAQDLISKL 255
Query: 250 LVKDSSQRLPLHKLLEHPWIIQNA 273
L + S+RLPL ++ HPW+ N+
Sbjct: 256 LRHNPSERLPLAQVSAHPWVRANS 279
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 154/264 (58%), Gaps = 9/264 (3%)
Query: 12 RWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKS-QLQQSQVEHQLRREVEIQ 70
+++L DF I + LG G FG V+L R + + A+KVL K ++ QVEH E +
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHT-NDERLML 60
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
S + HP I+R++G F D +++++I++Y GEL+ L+K + F A Y A + AL
Sbjct: 61 SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALE 120
Query: 131 YCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEH 190
Y H K +I+RD+KPEN+L+ G +KI DFG++ + + +CGT DY+ PE+V + +
Sbjct: 121 YLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPY 180
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQML 250
+ ++D WS G+L YE L G PF TY +I+ +L+FP P + KDL+S+++
Sbjct: 181 NKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP--PFFNEDVKDLLSRLI 238
Query: 251 VKDSSQRL-----PLHKLLEHPWI 269
+D SQRL + HPW
Sbjct: 239 TRDLSQRLGNLQNGTEDVKNHPWF 262
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 148/263 (56%), Gaps = 6/263 (2%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ DF +G LG+G F VY A + VA+K++ K + ++ + +++ EV+I L+
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQ-KCKYFSERRAATYVASLARALIYCH 133
HP+IL LY YF D VYL+LE GE+ + L+ + K FSE A ++ + ++Y H
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH 129
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHT---FNRRRTMCGTLDYLPPEMVESVEH 190
++HRD+ NLL+ +KIADFG + + T+CGT +Y+ PE+ H
Sbjct: 130 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAH 189
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQML 250
D+WSLG + Y L G PPF+ +T ++V D + P +S AKDLI Q+L
Sbjct: 190 GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMP--SFLSIEAKDLIHQLL 247
Query: 251 VKDSSQRLPLHKLLEHPWIIQNA 273
++ + RL L +L+HP++ +N+
Sbjct: 248 RRNPADRLSLSSVLDHPFMSRNS 270
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 145/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ + LG G FG V L + K + + A+K+L K ++ + Q+EH L E IQ +
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRIQQAV 99
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y++LEYA GE++ L++ FSE A Y A + Y H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +K+ADFG++ R +CGT +YL PE++ S ++
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 277
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 167 bits (423), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 145/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ FD K LG G FG V L + K S + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY A GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A E Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 167 bits (422), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 138/254 (54%), Gaps = 10/254 (3%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V L ++K + A+KV+ K Q++Q + L REV++ L HPNI++LY
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+F D+ YL+ E GEL+ E+ K FSE AA + + + Y H ++HRD+K
Sbjct: 94 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLK 153
Query: 144 PENLLIGAQ---GELKIADFGWSVHTFNRRRTM---CGTLDYLPPEMVESVEHDANVDIW 197
PENLL+ ++ ++I DFG S H F + M GT Y+ PE++ +D D+W
Sbjct: 154 PENLLLESKSKDANIRIIDFGLSTH-FEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVW 211
Query: 198 SLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF--PPKPIVSSAAKDLISQMLVKDSS 255
S GV+ Y L G PPF D +++ + F P VS +AKDLI +ML S
Sbjct: 212 STGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPS 271
Query: 256 QRLPLHKLLEHPWI 269
R+ L+H WI
Sbjct: 272 MRISARDALDHEWI 285
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 167 bits (422), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 138/254 (54%), Gaps = 10/254 (3%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V L ++K + A+KV+ K Q++Q + L REV++ L HPNI++LY
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 117
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+F D+ YL+ E GEL+ E+ K FSE AA + + + Y H ++HRD+K
Sbjct: 118 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLK 177
Query: 144 PENLLIGAQ---GELKIADFGWSVHTFNRRRTM---CGTLDYLPPEMVESVEHDANVDIW 197
PENLL+ ++ ++I DFG S H F + M GT Y+ PE++ +D D+W
Sbjct: 178 PENLLLESKSKDANIRIIDFGLSTH-FEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVW 235
Query: 198 SLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF--PPKPIVSSAAKDLISQMLVKDSS 255
S GV+ Y L G PPF D +++ + F P VS +AKDLI +ML S
Sbjct: 236 STGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPS 295
Query: 256 QRLPLHKLLEHPWI 269
R+ L+H WI
Sbjct: 296 MRISARDALDHEWI 309
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 147/261 (56%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ FD K LG G FG V L + K S + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY A GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQR---LP--LHKLLEHPWI 269
++R LP ++ + H W
Sbjct: 277 LTKRFGNLPNGVNDIKNHKWF 297
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 138/254 (54%), Gaps = 10/254 (3%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V L ++K + A+KV+ K Q++Q + L REV++ L HPNI++LY
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 116
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+F D+ YL+ E GEL+ E+ K FSE AA + + + Y H ++HRD+K
Sbjct: 117 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLK 176
Query: 144 PENLLIGAQ---GELKIADFGWSVHTFNRRRTM---CGTLDYLPPEMVESVEHDANVDIW 197
PENLL+ ++ ++I DFG S H F + M GT Y+ PE++ +D D+W
Sbjct: 177 PENLLLESKSKDANIRIIDFGLSTH-FEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVW 234
Query: 198 SLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF--PPKPIVSSAAKDLISQMLVKDSS 255
S GV+ Y L G PPF D +++ + F P VS +AKDLI +ML S
Sbjct: 235 STGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPS 294
Query: 256 QRLPLHKLLEHPWI 269
R+ L+H WI
Sbjct: 295 MRISARDALDHEWI 308
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 145/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ FD K LG G FG V L + K S + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 99
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY A GE++ L++ FSE A Y A + Y H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 277
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 145/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ FD K LG G FG V L + K S + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY A GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 145/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ FD K LG G FG V L + K S + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY A GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 140/245 (57%), Gaps = 4/245 (1%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ FD K LG G FG V L + K S + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 85
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY A GE++ L++ FSE A Y A + Y H
Sbjct: 86 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 145
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 146 SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 205
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 206 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 263
Query: 254 SSQRL 258
++R
Sbjct: 264 LTKRF 268
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 145/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ FD K LG G FG V L + K S + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 119
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY A GE++ L++ FSE A Y A + Y H
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 179
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ T+CGT +YL PE++ S ++
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKA 239
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 297
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 298 LTKRFGNLKNGVNDIKNHKWF 318
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 139/254 (54%), Gaps = 10/254 (3%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V L ++K + A+KV+ K Q++Q + L REV++ L HPNI++LY
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+F D+ YL+ E GEL+ E+ K FSE AA + + + Y H ++HRD+K
Sbjct: 100 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLK 159
Query: 144 PENLLIGAQGE---LKIADFGWSVHTFNRRRTM---CGTLDYLPPEMVESVEHDANVDIW 197
PENLL+ ++ + ++I DFG S H F + M GT Y+ PE++ +D D+W
Sbjct: 160 PENLLLESKSKDANIRIIDFGLSTH-FEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVW 217
Query: 198 SLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF--PPKPIVSSAAKDLISQMLVKDSS 255
S GV+ Y L G PPF D +++ + F P VS +AKDLI +ML S
Sbjct: 218 STGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPS 277
Query: 256 QRLPLHKLLEHPWI 269
R+ L+H WI
Sbjct: 278 MRISARDALDHEWI 291
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 145/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ FD K LG G FG V L + K S + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY A GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENL+I QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 164 bits (416), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 145/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ FD K LG G FG V L + K S + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY A GE++ L++ F+E A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 146/247 (59%), Gaps = 6/247 (2%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQ-LQQSQVEHQLRREVEIQSHLR 74
+DF K +G+G FG V LAR K A+KVL K L++ + +H + + +++
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HP ++ L+ F ++Y +L+Y GEL+ LQ+ + F E RA Y A +A AL Y H
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHS 157
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW---SVHTFNRRRTMCGTLDYLPPEMVESVEHD 191
++++RD+KPEN+L+ +QG + + DFG ++ + T CGT +YL PE++ +D
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYD 217
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
VD W LG + YE LYG+PPF ++ ++ Y I+ L+ KP ++++A+ L+ +L
Sbjct: 218 RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL--KPNITNSARHLLEGLLQ 275
Query: 252 KDSSQRL 258
KD ++RL
Sbjct: 276 KDRTKRL 282
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 145/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ FD K LG G FG V L + K S + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY A GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL Y+ G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 164 bits (415), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 142/253 (56%), Gaps = 7/253 (2%)
Query: 10 KKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQL-QQSQVEHQLRREVE 68
+ + T+NDFD K LG+G FG V L REK + A+K+L K + + +V H + E
Sbjct: 2 RAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESR 60
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
+ + RHP + L F R+ ++EYA GEL+ L + + F+E RA Y A + A
Sbjct: 61 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 120
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGW---SVHTFNRRRTMCGTLDYLPPEMV 185
L Y H + V++RDIK ENL++ G +KI DFG + +T CGT +YL PE++
Sbjct: 121 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL 180
Query: 186 ESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDL 245
E ++ VD W LGV+ YE + G PF ++H + I+ +++FP +S AK L
Sbjct: 181 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP--RTLSPEAKSL 238
Query: 246 ISQMLVKDSSQRL 258
++ +L KD QRL
Sbjct: 239 LAGLLKKDPKQRL 251
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 164 bits (415), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ FD K LG G FG V L + K S + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY A GE++ L++ F E A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 164 bits (415), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ FD K LG G FG V L + K S + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY A GE++ L++ F E A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 164 bits (415), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ FD K LG G FG V L + K S + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 119
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY A GE++ L++ F E A Y A + Y H
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 179
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 239
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 297
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 298 LTKRFGNLKNGVNDIKNHKWF 318
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 164 bits (414), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ FD K LG G FG V L + K S + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY A GE++ L++ F E A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 164 bits (414), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 140/249 (56%), Gaps = 7/249 (2%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQL-QQSQVEHQLRREVEIQSH 72
T+NDFD K LG+G FG V L REK + A+K+L K + + +V H + E + +
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQN 61
Query: 73 LRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYC 132
RHP + L F R+ ++EYA GEL+ L + + F+E RA Y A + AL Y
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGW---SVHTFNRRRTMCGTLDYLPPEMVESVE 189
H + V++RDIK ENL++ G +KI DFG + +T CGT +YL PE++E +
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 190 HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQM 249
+ VD W LGV+ YE + G PF ++H + I+ +++FP +S AK L++ +
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP--RTLSPEAKSLLAGL 239
Query: 250 LVKDSSQRL 258
L KD QRL
Sbjct: 240 LKKDPKQRL 248
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 164 bits (414), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 140/249 (56%), Gaps = 7/249 (2%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQL-QQSQVEHQLRREVEIQSH 72
T+NDFD K LG+G FG V L REK + A+K+L K + + +V H + E + +
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQN 61
Query: 73 LRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYC 132
RHP + L F R+ ++EYA GEL+ L + + F+E RA Y A + AL Y
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGW---SVHTFNRRRTMCGTLDYLPPEMVESVE 189
H + V++RDIK ENL++ G +KI DFG + +T CGT +YL PE++E +
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 190 HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQM 249
+ VD W LGV+ YE + G PF ++H + I+ +++FP +S AK L++ +
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP--RTLSPEAKSLLAGL 239
Query: 250 LVKDSSQRL 258
L KD QRL
Sbjct: 240 LKKDPKQRL 248
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 164 bits (414), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ FD K LG G FG V L + K S + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 93
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY A GE++ L++ F E A Y A + Y H
Sbjct: 94 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 153
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 154 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 213
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 214 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 271
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 272 LTKRFGNLKNGVNDIKNHKWF 292
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 164 bits (414), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 140/249 (56%), Gaps = 7/249 (2%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQL-QQSQVEHQLRREVEIQSH 72
T+NDFD K LG+G FG V L REK + A+K+L K + + +V H + E + +
Sbjct: 8 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQN 66
Query: 73 LRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYC 132
RHP + L F R+ ++EYA GEL+ L + + F+E RA Y A + AL Y
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 126
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLPPEMVESVE 189
H + V++RDIK ENL++ G +KI DFG + TM CGT +YL PE++E +
Sbjct: 127 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 186
Query: 190 HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQM 249
+ VD W LGV+ YE + G PF ++H + I+ +++FP +S AK L++ +
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP--RTLSPEAKSLLAGL 244
Query: 250 LVKDSSQRL 258
L KD QRL
Sbjct: 245 LKKDPKQRL 253
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 164 bits (414), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 140/249 (56%), Gaps = 7/249 (2%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQL-QQSQVEHQLRREVEIQSH 72
T+NDFD K LG+G FG V L REK + A+K+L K + + +V H + E + +
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQN 61
Query: 73 LRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYC 132
RHP + L F R+ ++EYA GEL+ L + + F+E RA Y A + AL Y
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLPPEMVESVE 189
H + V++RDIK ENL++ G +KI DFG + TM CGT +YL PE++E +
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 190 HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQM 249
+ VD W LGV+ YE + G PF ++H + I+ +++FP +S AK L++ +
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP--RTLSPEAKSLLAGL 239
Query: 250 LVKDSSQRL 258
L KD QRL
Sbjct: 240 LKKDPKQRL 248
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 163 bits (413), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 140/249 (56%), Gaps = 7/249 (2%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQL-QQSQVEHQLRREVEIQSH 72
T+NDFD K LG+G FG V L REK + A+K+L K + + +V H + E + +
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQN 61
Query: 73 LRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYC 132
RHP + L F R+ ++EYA GEL+ L + + F+E RA Y A + AL Y
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLPPEMVESVE 189
H + V++RDIK ENL++ G +KI DFG + TM CGT +YL PE++E +
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 190 HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQM 249
+ VD W LGV+ YE + G PF ++H + I+ +++FP +S AK L++ +
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP--RTLSPEAKSLLAGL 239
Query: 250 LVKDSSQRL 258
L KD QRL
Sbjct: 240 LKKDPKQRL 248
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 163 bits (413), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ FD K LG G FG V L + K S + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY A GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL P ++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 163 bits (413), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 140/249 (56%), Gaps = 7/249 (2%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQL-QQSQVEHQLRREVEIQSH 72
T+NDFD K LG+G FG V L REK + A+K+L K + + +V H + E + +
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQN 61
Query: 73 LRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYC 132
RHP + L F R+ ++EYA GEL+ L + + F+E RA Y A + AL Y
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLPPEMVESVE 189
H + V++RDIK ENL++ G +KI DFG + TM CGT +YL PE++E +
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 190 HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQM 249
+ VD W LGV+ YE + G PF ++H + I+ +++FP +S AK L++ +
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP--RTLSPEAKSLLAGL 239
Query: 250 LVKDSSQRL 258
L KD QRL
Sbjct: 240 LKKDPKQRL 248
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 163 bits (413), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ FD K LG G FG V L + K S + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY A GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++ ++ + H W
Sbjct: 277 LTKAFGNLKNGVNDIKNHKWF 297
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 163 bits (413), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 145/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + K + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 99
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EYA GE++ L++ FSE A Y A + Y H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENL+I QG +K+ DFG++ R +CGT +YL PE++ S ++
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 277
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 145/256 (56%), Gaps = 11/256 (4%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K LG G +G V L R+K ++ A+K++ K+ + S +L EV + L HPNI++L
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSS-NSKLLEEVAVLKLLDHPNIMKL 101
Query: 82 YGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
Y +F D++ YL++E GEL+ E+ F+E AA + + + Y H +++HRD
Sbjct: 102 YDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRD 161
Query: 142 IKPENLLIGAQGE---LKIADFGWSVHTFNRRRTM---CGTLDYLPPEMVESVEHDANVD 195
+KPENLL+ ++ + +KI DFG S F ++ M GT Y+ PE++ ++D D
Sbjct: 162 LKPENLLLESKEKDALIKIVDFGLSA-VFENQKKMKERLGTAYYIAPEVLRK-KYDEKCD 219
Query: 196 IWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF--PPKPIVSSAAKDLISQMLVKD 253
+WS+GV+ + L G PPF + + R++ + F P VS AKDLI QML D
Sbjct: 220 VWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFD 279
Query: 254 SSQRLPLHKLLEHPWI 269
S +R+ + LEHPWI
Sbjct: 280 SQRRISAQQALEHPWI 295
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ FD K LG G FG V L + K S + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY A GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT + L PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ FD K LG G FG V L + K S + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY A GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R + GT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 135/253 (53%), Gaps = 8/253 (3%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V L ++K + A+KV+ K Q++Q + L REV++ L HPNI +LY
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+F D+ YL+ E GEL+ E+ K FSE AA + + + Y H ++HRD+K
Sbjct: 94 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLK 153
Query: 144 PENLLIGAQ---GELKIADFGWSVH--TFNRRRTMCGTLDYLPPEMVESVEHDANVDIWS 198
PENLL+ ++ ++I DFG S H + + GT Y+ PE++ +D D+WS
Sbjct: 154 PENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWS 212
Query: 199 LGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF--PPKPIVSSAAKDLISQMLVKDSSQ 256
GV+ Y L G PPF D +++ + F P VS +AKDLI + L S
Sbjct: 213 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSX 272
Query: 257 RLPLHKLLEHPWI 269
R+ L+H WI
Sbjct: 273 RISARDALDHEWI 285
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 145/248 (58%), Gaps = 9/248 (3%)
Query: 18 FDIGKPLGRGKFGHVYLARE---KRSNHIVALKVLFKSQL-QQSQVEHQLRREVEIQSHL 73
F++ + LG+G +G V+ R+ + I A+KVL K+ + + ++ + E I +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
+HP I+ L F ++YLILEY + GEL+ +L++ F E A Y+A ++ AL + H
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGW---SVHTFNRRRTMCGTLDYLPPEMVESVEH 190
K +I+RD+KPEN+++ QG +K+ DFG S+H T CGT++Y+ PE++ H
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGH 198
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQML 250
+ VD WSLG L Y+ L G PPF + T +I++ L P P ++ A+DL+ ++L
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP--PYLTQEARDLLKKLL 256
Query: 251 VKDSSQRL 258
++++ RL
Sbjct: 257 KRNAASRL 264
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 161 bits (408), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + K + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 99
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY GE++ L++ FSE A Y A + Y H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 277
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 278 LTKRFGNLKNGVNDIXNHKWF 298
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 161 bits (408), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 152/258 (58%), Gaps = 6/258 (2%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ ++ + K +G+G F V LAR + VA+K++ K+QL S ++ +L REV I L
Sbjct: 6 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ-KLFREVRIMKVLN 64
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPNI++L+ +K +YL++EYA+ GE++ L + E+ A + A+ YCH
Sbjct: 65 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWSVH-TF-NRRRTMCGTLDYLPPEMVESVEHDA 192
K ++HRD+K ENLL+ A +KIADFG+S TF N+ T CG+ Y PE+ + ++D
Sbjct: 125 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 184
Query: 193 -NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
VD+WSLGV+ Y + G PF+ + + R+++ + P +S+ ++L+ + L+
Sbjct: 185 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP--FYMSTDCENLLKKFLI 242
Query: 252 KDSSQRLPLHKLLEHPWI 269
+ S+R L ++++ W+
Sbjct: 243 LNPSKRGTLEQIMKDRWM 260
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 161 bits (408), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ FD K LG G FG V L + K S + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY A GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R + GT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 161 bits (408), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 99
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY GE++ L++ FSE A Y A + Y H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R T+CGT +YL PE++ S ++
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKA 219
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 277
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 161 bits (407), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + K + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 99
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY GE++ L++ FSE A Y A + Y H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 277
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 161 bits (407), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + K + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 161 bits (407), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EYA GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENL+I QG +K+ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 161 bits (407), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + K + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWF 297
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 161 bits (407), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 139/245 (56%), Gaps = 4/245 (1%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + K + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 119
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY GE++ L++ FSE A Y A + Y H
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 179
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 239
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 297
Query: 254 SSQRL 258
++R
Sbjct: 298 LTKRF 302
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 161 bits (407), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + K + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 99
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY GE++ L++ FSE A Y A + Y H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 277
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 161 bits (407), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + K + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWF 297
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 161 bits (407), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY A GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWF 297
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 160 bits (406), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/261 (38%), Positives = 147/261 (56%), Gaps = 9/261 (3%)
Query: 4 EVS-AKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQL-QQSQVEH 61
EVS AK K R T+N+F+ K LG+G FG V L +EK + A+K+L K + + +V H
Sbjct: 138 EVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAH 197
Query: 62 QLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATY 121
L +Q+ RHP + L F R+ ++EYA GEL+ L + + FSE RA Y
Sbjct: 198 TLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 256
Query: 122 VASLARALIYCHG-KHVIHRDIKPENLLIGAQGELKIADFGW---SVHTFNRRRTMCGTL 177
A + AL Y H K+V++RD+K ENL++ G +KI DFG + +T CGT
Sbjct: 257 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP 316
Query: 178 DYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI 237
+YL PE++E ++ VD W LGV+ YE + G PF ++H + I+ +++FP
Sbjct: 317 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP--RT 374
Query: 238 VSSAAKDLISQMLVKDSSQRL 258
+ AK L+S +L KD QRL
Sbjct: 375 LGPEAKSLLSGLLKKDPKQRL 395
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 160 bits (406), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 156/270 (57%), Gaps = 8/270 (2%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQ 62
S SA E+ + ++ + K +G+G F V LAR + VA+K++ K+QL S ++ +
Sbjct: 3 SATSADEQPH--IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ-K 59
Query: 63 LRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYV 122
L REV I L HPNI++L+ +K +YL++EYA+ GE++ L E+ A
Sbjct: 60 LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 123 ASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVH-TF-NRRRTMCGTLDYL 180
+ A+ YCH K ++HRD+K ENLL+ A +KIADFG+S TF N+ T CG+ Y
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYA 179
Query: 181 PPEMVESVEHDA-NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVS 239
PE+ + ++D VD+WSLGV+ Y + G PF+ + + R+++ + P +S
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP--FYMS 237
Query: 240 SAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ ++L+ + L+ + S+R L ++++ W+
Sbjct: 238 TDCENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 160 bits (406), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 139/245 (56%), Gaps = 4/245 (1%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + K + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 91
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY GE++ L++ FSE A Y A + Y H
Sbjct: 92 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 151
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 211
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 212 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 269
Query: 254 SSQRL 258
++R
Sbjct: 270 LTKRF 274
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 160 bits (406), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/261 (38%), Positives = 147/261 (56%), Gaps = 9/261 (3%)
Query: 4 EVS-AKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQL-QQSQVEH 61
EVS AK K R T+N+F+ K LG+G FG V L +EK + A+K+L K + + +V H
Sbjct: 135 EVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAH 194
Query: 62 QLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATY 121
L +Q+ RHP + L F R+ ++EYA GEL+ L + + FSE RA Y
Sbjct: 195 TLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 253
Query: 122 VASLARALIYCHG-KHVIHRDIKPENLLIGAQGELKIADFGW---SVHTFNRRRTMCGTL 177
A + AL Y H K+V++RD+K ENL++ G +KI DFG + +T CGT
Sbjct: 254 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP 313
Query: 178 DYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI 237
+YL PE++E ++ VD W LGV+ YE + G PF ++H + I+ +++FP
Sbjct: 314 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP--RT 371
Query: 238 VSSAAKDLISQMLVKDSSQRL 258
+ AK L+S +L KD QRL
Sbjct: 372 LGPEAKSLLSGLLKKDPKQRL 392
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 160 bits (406), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 139/245 (56%), Gaps = 4/245 (1%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 84
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY GE++ L++ FSE A Y A + Y H
Sbjct: 85 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 144
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R T+CGT +YL PE++ S ++
Sbjct: 145 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKA 204
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 205 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 262
Query: 254 SSQRL 258
++R
Sbjct: 263 LTKRF 267
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 160 bits (406), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 156/270 (57%), Gaps = 8/270 (2%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQ 62
S SA E+ + ++ + K +G+G F V LAR + VA+K++ K+QL S ++ +
Sbjct: 3 SATSADEQPH--IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ-K 59
Query: 63 LRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYV 122
L REV I L HPNI++L+ +K +YL++EYA+ GE++ L E+ A
Sbjct: 60 LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 123 ASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVH-TF-NRRRTMCGTLDYL 180
+ A+ YCH K ++HRD+K ENLL+ A +KIADFG+S TF N+ T CG+ Y
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYA 179
Query: 181 PPEMVESVEHDA-NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVS 239
PE+ + ++D VD+WSLGV+ Y + G PF+ + + R+++ + P +S
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP--FYMS 237
Query: 240 SAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ ++L+ + L+ + S+R L ++++ W+
Sbjct: 238 TDCENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 160 bits (406), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K +G G FG V L + + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +K+ADFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 160 bits (405), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 143/261 (54%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 99
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P + +L F D +Y+++EYA GE++ L++ FSE A Y A + Y H
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENL+I QG +K+ DFG++ R +CGT +YL PE++ S ++
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 277
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 160 bits (405), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 143/261 (54%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 99
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P + +L F D +Y+++EYA GE++ L++ FSE A Y A + Y H
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENL+I QG +K+ DFG++ R +CGT +YL PE++ S ++
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 277
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 160 bits (404), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 139/257 (54%), Gaps = 8/257 (3%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K LG G +G V L ++K + A+K++ KS + + L EV + L HPNI++L
Sbjct: 10 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 69
Query: 82 YGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
Y +F D++ YL++E GEL+ E+ + FSE AA + + Y H +++HRD
Sbjct: 70 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRD 129
Query: 142 IKPENLLIGAQGE---LKIADFGWSVH--TFNRRRTMCGTLDYLPPEMVESVEHDANVDI 196
+KPENLL+ ++ +KI DFG S H + + GT Y+ PE++ ++D D+
Sbjct: 130 LKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK-KYDEKCDV 188
Query: 197 WSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPK--PIVSSAAKDLISQMLVKDS 254
WS GV+ Y L G PPF + + +R+ + F P VS AK L+ ML +
Sbjct: 189 WSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEP 248
Query: 255 SQRLPLHKLLEHPWIIQ 271
S+R+ + L HPWI++
Sbjct: 249 SKRISAEEALNHPWIVK 265
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 134/247 (54%), Gaps = 7/247 (2%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF GK LG G F V LARE ++ A+K+L K + + + RE ++ S L HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
++LY F D +++Y L YA GEL K ++K F E Y A + AL Y HGK
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+IHRD+KPEN+L+ ++I DFG + R GT Y+ PE++
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAX 212
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
+ D+W+LG + Y+ + G+PPF A + +I++++ FP K A+DL+ ++LV
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEK--FFPKARDLVEKLLV 270
Query: 252 KDSSQRL 258
D+++RL
Sbjct: 271 LDATKRL 277
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 156/270 (57%), Gaps = 8/270 (2%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQ 62
S SA E+ + ++ + K +G+G F V LAR + VA++++ K+QL S ++ +
Sbjct: 3 SATSADEQPH--IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQ-K 59
Query: 63 LRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYV 122
L REV I L HPNI++L+ +K +YL++EYA+ GE++ L E+ A
Sbjct: 60 LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 123 ASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVH-TF-NRRRTMCGTLDYL 180
+ A+ YCH K ++HRD+K ENLL+ A +KIADFG+S TF N+ T CG+ Y
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYA 179
Query: 181 PPEMVESVEHDA-NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVS 239
PE+ + ++D VD+WSLGV+ Y + G PF+ + + R+++ + P +S
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP--FYMS 237
Query: 240 SAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ ++L+ + L+ + S+R L ++++ W+
Sbjct: 238 TDCENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 136/247 (55%), Gaps = 7/247 (2%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF GK LG G F V LARE ++ A+K+L K + + + RE ++ S L HP
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
++LY F D +++Y L YA GEL K ++K F E Y A + AL Y HGK
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+IHRD+KPEN+L+ ++I DFG + R + GT Y+ PE++
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 213
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
+ D+W+LG + Y+ + G+PPF A +++I++++ FP K A+DL+ ++LV
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK--FFPKARDLVEKLLV 271
Query: 252 KDSSQRL 258
D+++RL
Sbjct: 272 LDATKRL 278
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EYA GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENL+I QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 136/247 (55%), Gaps = 7/247 (2%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF GK LG G F V LARE ++ A+K+L K + + + RE ++ S L HP
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
++LY F D +++Y L YA GEL K ++K F E Y A + AL Y HGK
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+IHRD+KPEN+L+ ++I DFG + R + GT Y+ PE++
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 209
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
+ D+W+LG + Y+ + G+PPF A +++I++++ FP K A+DL+ ++LV
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK--FFPKARDLVEKLLV 267
Query: 252 KDSSQRL 258
D+++RL
Sbjct: 268 LDATKRL 274
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 144/248 (58%), Gaps = 9/248 (3%)
Query: 18 FDIGKPLGRGKFGHVYLARE---KRSNHIVALKVLFKSQL-QQSQVEHQLRREVEIQSHL 73
F++ + LG+G +G V+ R+ + I A+KVL K+ + + ++ + E I +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
+HP I+ L F ++YLILEY + GEL+ +L++ F E A Y+A ++ AL + H
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGW---SVHTFNRRRTMCGTLDYLPPEMVESVEH 190
K +I+RD+KPEN+++ QG +K+ DFG S+H CGT++Y+ PE++ H
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGH 198
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQML 250
+ VD WSLG L Y+ L G PPF + T +I++ L P P ++ A+DL+ ++L
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP--PYLTQEARDLLKKLL 256
Query: 251 VKDSSQRL 258
++++ RL
Sbjct: 257 KRNAASRL 264
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 139/257 (54%), Gaps = 8/257 (3%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K LG G +G V L ++K + A+K++ KS + + L EV + L HPNI++L
Sbjct: 27 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 86
Query: 82 YGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
Y +F D++ YL++E GEL+ E+ + FSE AA + + Y H +++HRD
Sbjct: 87 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRD 146
Query: 142 IKPENLLIGAQGE---LKIADFGWSVH--TFNRRRTMCGTLDYLPPEMVESVEHDANVDI 196
+KPENLL+ ++ +KI DFG S H + + GT Y+ PE++ ++D D+
Sbjct: 147 LKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK-KYDEKCDV 205
Query: 197 WSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPK--PIVSSAAKDLISQMLVKDS 254
WS GV+ Y L G PPF + + +R+ + F P VS AK L+ ML +
Sbjct: 206 WSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEP 265
Query: 255 SQRLPLHKLLEHPWIIQ 271
S+R+ + L HPWI++
Sbjct: 266 SKRISAEEALNHPWIVK 282
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 138/245 (56%), Gaps = 4/245 (1%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + K + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 91
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY GE++ L++ F E A Y A + Y H
Sbjct: 92 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 151
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 211
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 212 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 269
Query: 254 SSQRL 258
++R
Sbjct: 270 LTKRF 274
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 143/261 (54%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EYA GE++ L++ F E A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENL+I QG +K+ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 135/247 (54%), Gaps = 7/247 (2%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF GK LG G F V LARE ++ A+K+L K + + + RE ++ S L HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
++LY F D +++Y L YA GEL K ++K F E Y A + AL Y HGK
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+IHRD+KPEN+L+ ++I DFG + R GT Y+ PE++
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
+ D+W+LG + Y+ + G+PPF A +++I++++ FP K A+DL+ ++LV
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK--FFPKARDLVEKLLV 270
Query: 252 KDSSQRL 258
D+++RL
Sbjct: 271 LDATKRL 277
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K +G G FG V L + + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY G+++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +K+ADFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 135/247 (54%), Gaps = 7/247 (2%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF GK LG G F V LARE ++ A+K+L K + + + RE ++ S L HP
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
++LY F D +++Y L YA GEL K ++K F E Y A + AL Y HGK
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+IHRD+KPEN+L+ ++I DFG + R GT Y+ PE++
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSAC 210
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
+ D+W+LG + Y+ + G+PPF A +++I++++ FP K A+DL+ ++LV
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK--FFPKARDLVEKLLV 268
Query: 252 KDSSQRL 258
D+++RL
Sbjct: 269 LDATKRL 275
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 144/261 (55%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K +G G FG V L + + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY G+++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +K+ADFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 135/247 (54%), Gaps = 7/247 (2%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF GK LG G F V LARE ++ A+K+L K + + + RE ++ S L HP
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
++LY F D +++Y L YA GEL K ++K F E Y A + AL Y HGK
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+IHRD+KPEN+L+ ++I DFG + R GT Y+ PE++
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
+ D+W+LG + Y+ + G+PPF A +++I++++ FP K A+DL+ ++LV
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK--FFPKARDLVEKLLV 268
Query: 252 KDSSQRL 258
D+++RL
Sbjct: 269 LDATKRL 275
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 134/247 (54%), Gaps = 7/247 (2%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF GK LG G F V LARE ++ A+K+L K + + + RE ++ S L HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
++LY F D +++Y L YA GEL K ++K F E Y A + AL Y HGK
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+IHRD+KPEN+L+ ++I DFG + R GT Y+ PE++
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
+ D+W+LG + Y+ + G+PPF A + +I++++ FP K A+DL+ ++LV
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEK--FFPKARDLVEKLLV 270
Query: 252 KDSSQRL 258
D+++RL
Sbjct: 271 LDATKRL 277
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 135/247 (54%), Gaps = 7/247 (2%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF GK LG G F V LARE ++ A+K+L K + + + RE ++ S L HP
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
++LY F D +++Y L YA GEL K ++K F E Y A + AL Y HGK
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+IHRD+KPEN+L+ ++I DFG + R GT Y+ PE++
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
+ D+W+LG + Y+ + G+PPF A +++I++++ FP K A+DL+ ++LV
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK--FFPKARDLVEKLLV 268
Query: 252 KDSSQRL 258
D+++RL
Sbjct: 269 LDATKRL 275
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 135/247 (54%), Gaps = 7/247 (2%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF GK LG G F V LARE ++ A+K+L K + + + RE ++ S L HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
++LY F D +++Y L YA GEL K ++K F E Y A + AL Y HGK
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+IHRD+KPEN+L+ ++I DFG + R GT Y+ PE++
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
+ D+W+LG + Y+ + G+PPF A +++I++++ FP K A+DL+ ++LV
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK--FFPKARDLVEKLLV 270
Query: 252 KDSSQRL 258
D+++RL
Sbjct: 271 LDATKRL 277
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 135/247 (54%), Gaps = 7/247 (2%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF GK LG G F V LARE ++ A+K+L K + + + RE ++ S L HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
++LY F D +++Y L YA GEL K ++K F E Y A + AL Y HGK
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+IHRD+KPEN+L+ ++I DFG + R GT Y+ PE++
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
+ D+W+LG + Y+ + G+PPF A +++I++++ FP K A+DL+ ++LV
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK--FFPKARDLVEKLLV 270
Query: 252 KDSSQRL 258
D+++RL
Sbjct: 271 LDATKRL 277
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 135/247 (54%), Gaps = 7/247 (2%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF GK LG G F V LARE ++ A+K+L K + + + RE ++ S L HP
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
++LY F D +++Y L YA GEL K ++K F E Y A + AL Y HGK
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+IHRD+KPEN+L+ ++I DFG + R GT Y+ PE++
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 213
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
+ D+W+LG + Y+ + G+PPF A +++I++++ FP K A+DL+ ++LV
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK--FFPKARDLVEKLLV 271
Query: 252 KDSSQRL 258
D+++RL
Sbjct: 272 LDATKRL 278
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 143/261 (54%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 135/247 (54%), Gaps = 7/247 (2%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF GK LG G F V LARE ++ A+K+L K + + + RE ++ S L HP
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
++LY F D +++Y L YA GEL K ++K F E Y A + AL Y HGK
Sbjct: 70 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 129
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+IHRD+KPEN+L+ ++I DFG + R GT Y+ PE++
Sbjct: 130 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 189
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
+ D+W+LG + Y+ + G+PPF A +++I++++ FP K A+DL+ ++LV
Sbjct: 190 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK--FFPKARDLVEKLLV 247
Query: 252 KDSSQRL 258
D+++RL
Sbjct: 248 LDATKRL 254
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 135/247 (54%), Gaps = 7/247 (2%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF GK LG G F V LARE ++ A+K+L K + + + RE ++ S L HP
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
++LY F D +++Y L YA GEL K ++K F E Y A + AL Y HGK
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 134
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+IHRD+KPEN+L+ ++I DFG + R GT Y+ PE++
Sbjct: 135 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 194
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
+ D+W+LG + Y+ + G+PPF A +++I++++ FP K A+DL+ ++LV
Sbjct: 195 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK--FFPKARDLVEKLLV 252
Query: 252 KDSSQRL 258
D+++RL
Sbjct: 253 LDATKRL 259
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 135/247 (54%), Gaps = 7/247 (2%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF GK LG G F V LARE ++ A+K+L K + + + RE ++ S L HP
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
++LY F D +++Y L YA GEL K ++K F E Y A + AL Y HGK
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 127
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+IHRD+KPEN+L+ ++I DFG + R GT Y+ PE++
Sbjct: 128 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 187
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
+ D+W+LG + Y+ + G+PPF A +++I++++ FP K A+DL+ ++LV
Sbjct: 188 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK--FFPKARDLVEKLLV 245
Query: 252 KDSSQRL 258
D+++RL
Sbjct: 246 LDATKRL 252
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 135/247 (54%), Gaps = 7/247 (2%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF GK LG G F V LARE ++ A+K+L K + + + RE ++ S L HP
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
++LY F D +++Y L YA GEL K ++K F E Y A + AL Y HGK
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 128
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+IHRD+KPEN+L+ ++I DFG + R GT Y+ PE++
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 188
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
+ D+W+LG + Y+ + G+PPF A +++I++++ FP K A+DL+ ++LV
Sbjct: 189 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK--FFPKARDLVEKLLV 246
Query: 252 KDSSQRL 258
D+++RL
Sbjct: 247 LDATKRL 253
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 143/261 (54%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 143/261 (54%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWF 297
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 135/247 (54%), Gaps = 7/247 (2%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF GK LG G F V LARE ++ A+K+L K + + + RE ++ S L HP
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
++LY F D +++Y L YA GEL K ++K F E Y A + AL Y HGK
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+IHRD+KPEN+L+ ++I DFG + R GT Y+ PE++
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 209
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
+ D+W+LG + Y+ + G+PPF A +++I++++ FP K A+DL+ ++LV
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK--FFPKARDLVEKLLV 267
Query: 252 KDSSQRL 258
D+++RL
Sbjct: 268 LDATKRL 274
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 158 bits (400), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 143/261 (54%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + + + A+K+L K ++ + ++EH L + +Q+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EYA GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENL+I QG +K+ DFG + R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 158 bits (400), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 135/247 (54%), Gaps = 7/247 (2%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF GK LG G F V LARE ++ A+K+L K + + + RE ++ S L HP
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
++LY F D +++Y L YA GEL K ++K F E Y A + AL Y HGK
Sbjct: 98 FFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 157
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+IHRD+KPEN+L+ ++I DFG + R GT Y+ PE++
Sbjct: 158 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 217
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
+ D+W+LG + Y+ + G+PPF A +++I++++ FP K A+DL+ ++LV
Sbjct: 218 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK--FFPKARDLVEKLLV 275
Query: 252 KDSSQRL 258
D+++RL
Sbjct: 276 LDATKRL 282
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 158 bits (400), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 143/261 (54%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 99
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY GE++ L++ FSE A Y A + Y H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 277
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 142/261 (54%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 99
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P + +L F D +Y+++EYA GE++ L++ F E A Y A + Y H
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENL+I QG +K+ DFG++ R +CGT +YL PE++ S ++
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 277
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 135/247 (54%), Gaps = 7/247 (2%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF GK LG G F V LARE ++ A+K+L K + + + RE ++ S L HP
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
++LY F D +++Y L YA GEL K ++K F E Y A + AL Y HGK
Sbjct: 71 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 130
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+IHRD+KPEN+L+ ++I DFG + R GT Y+ PE++
Sbjct: 131 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 190
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
+ D+W+LG + Y+ + G+PPF A +++I++++ FP K A+DL+ ++LV
Sbjct: 191 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK--FFPKARDLVEKLLV 248
Query: 252 KDSSQRL 258
D+++RL
Sbjct: 249 LDATKRL 255
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 154/270 (57%), Gaps = 8/270 (2%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQ 62
S SA E+ + ++ + K +G+G F V LAR + VA+K++ K+QL S ++ +
Sbjct: 3 SATSADEQPH--IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ-K 59
Query: 63 LRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYV 122
L REV I L HPNI++L+ +K +YL++EYA+ GE++ L E+ A
Sbjct: 60 LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 123 ASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVH-TF-NRRRTMCGTLDYL 180
+ A+ YCH K ++HRD+K ENLL+ A +KIADFG+S TF N+ CG Y
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYA 179
Query: 181 PPEMVESVEHDA-NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVS 239
PE+ + ++D VD+WSLGV+ Y + G PF+ + + R+++ + P +S
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP--FYMS 237
Query: 240 SAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ ++L+ + L+ + S+R L ++++ W+
Sbjct: 238 TDCENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 157 bits (398), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 135/247 (54%), Gaps = 7/247 (2%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF GK LG G F V LARE ++ A+K+L K + + + RE ++ S L HP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
++LY F D +++Y L YA G L K ++K F E Y A + AL Y HGK
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+IHRD+KPEN+L+ ++I DFG + R + GT Y+ PE++
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAS 212
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
+ D+W+LG + Y+ + G+PPF A +++I++++ FP K A+DL+ ++LV
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK--FFPKARDLVEKLLV 270
Query: 252 KDSSQRL 258
D+++RL
Sbjct: 271 LDATKRL 277
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 134/247 (54%), Gaps = 7/247 (2%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF GK LG G F LARE ++ A+K+L K + + + RE ++ S L HP
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
++LY F D +++Y L YA GEL K ++K F E Y A + AL Y HGK
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+IHRD+KPEN+L+ ++I DFG + R GT Y+ PE++
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
+ D+W+LG + Y+ + G+PPF A +++I++++ FP K A+DL+ ++LV
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK--FFPKARDLVEKLLV 268
Query: 252 KDSSQRL 258
D+++RL
Sbjct: 269 LDATKRL 275
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 155/270 (57%), Gaps = 8/270 (2%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQ 62
S SA E+ + ++ + K +G+G F V LAR + VA++++ K+QL S ++ +
Sbjct: 3 SATSADEQPH--IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQ-K 59
Query: 63 LRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYV 122
L REV I L HPNI++L+ +K +YL++EYA+ GE++ L E+ A
Sbjct: 60 LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 123 ASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVH-TF-NRRRTMCGTLDYL 180
+ A+ YCH K ++HRD+K ENLL+ A +KIADFG+S TF N+ CG+ Y
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYA 179
Query: 181 PPEMVESVEHDA-NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVS 239
PE+ + ++D VD+WSLGV+ Y + G PF+ + + R+++ + P +S
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP--FYMS 237
Query: 240 SAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ ++L+ + L+ + S+R L ++++ W+
Sbjct: 238 TDCENLLKKFLILNPSKRGTLEQIMKDRWM 267
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 143/261 (54%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + + + A+K+L K ++ + ++EH L + +Q+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EYA GE++ L++ FSE A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENL+I QG +++ DFG + R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 134/247 (54%), Gaps = 7/247 (2%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF GK LG G F V LARE ++ A+K+L K + + + RE ++ S L HP
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
++LY F D +++Y L YA GEL K ++K F E Y A + AL Y HGK
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 155
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+IHRD+KPEN+L+ ++I DFG + R GT Y+ PE++
Sbjct: 156 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 215
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
+ D+W+LG + Y+ + G+PPF A +++I++++ FP A+DL+ ++LV
Sbjct: 216 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAA--FFPKARDLVEKLLV 273
Query: 252 KDSSQRL 258
D+++RL
Sbjct: 274 LDATKRL 280
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 142/261 (54%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY GE++ L++ F E A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 157 bits (396), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 142/261 (54%), Gaps = 9/261 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 99
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY GE++ L++ F E A Y A + Y H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 277
Query: 254 SSQRL-----PLHKLLEHPWI 269
++R ++ + H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 157 bits (396), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 140/252 (55%), Gaps = 8/252 (3%)
Query: 12 RWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQL-QQSQVEHQLRREVEIQ 70
R T+N+F+ K LG+G FG V L +EK + A+K+L K + + +V H L +Q
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
+ RHP + L F R+ ++EYA GEL+ L + + FSE RA Y A + AL
Sbjct: 64 NS-RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD 122
Query: 131 YCHG-KHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLPPEMVE 186
Y H K+V++RD+K ENL++ G +KI DFG TM CGT +YL PE++E
Sbjct: 123 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 182
Query: 187 SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
++ VD W LGV+ YE + G PF ++H + I+ +++FP + AK L+
Sbjct: 183 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP--RTLGPEAKSLL 240
Query: 247 SQMLVKDSSQRL 258
S +L KD QRL
Sbjct: 241 SGLLKKDPKQRL 252
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 156 bits (395), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 137/245 (55%), Gaps = 4/245 (1%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHL 73
L+ F+ K LG G FG V L + + + A+K+L K ++ + Q+EH L + +Q+ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-V 98
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
P +++L F D +Y+++EY GE++ L++ F E A Y A + Y H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+I+RD+KPENLLI QG +++ DFG++ R +CGT +YL PE++ S ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKD 253
VD W+LGVL YE G PPF A + Y +IV ++FP SS KDL+ +L D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVD 276
Query: 254 SSQRL 258
++R
Sbjct: 277 LTKRF 281
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 140/252 (55%), Gaps = 8/252 (3%)
Query: 12 RWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQL-QQSQVEHQLRREVEIQ 70
R T+N+F+ K LG+G FG V L +EK + A+K+L K + + +V H L +Q
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 64
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
+ RHP + L F R+ ++EYA GEL+ L + + FSE RA Y A + AL
Sbjct: 65 NS-RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD 123
Query: 131 YCHG-KHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLPPEMVE 186
Y H K+V++RD+K ENL++ G +KI DFG TM CGT +YL PE++E
Sbjct: 124 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 183
Query: 187 SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
++ VD W LGV+ YE + G PF ++H + I+ +++FP + AK L+
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP--RTLGPEAKSLL 241
Query: 247 SQMLVKDSSQRL 258
S +L KD QRL
Sbjct: 242 SGLLKKDPKQRL 253
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 140/252 (55%), Gaps = 8/252 (3%)
Query: 12 RWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQL-QQSQVEHQLRREVEIQ 70
R T+N+F+ K LG+G FG V L +EK + A+K+L K + + +V H L +Q
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
+ RHP + L F R+ ++EYA GEL+ L + + FSE RA Y A + AL
Sbjct: 66 NS-RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD 124
Query: 131 YCHG-KHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLPPEMVE 186
Y H K+V++RD+K ENL++ G +KI DFG TM CGT +YL PE++E
Sbjct: 125 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 184
Query: 187 SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
++ VD W LGV+ YE + G PF ++H + I+ +++FP + AK L+
Sbjct: 185 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP--RTLGPEAKSLL 242
Query: 247 SQMLVKDSSQRL 258
S +L KD QRL
Sbjct: 243 SGLLKKDPKQRL 254
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 148/258 (57%), Gaps = 6/258 (2%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ ++ + K +G+G F V LAR + VA+K++ K+QL + ++ +L REV I L
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ-KLFREVRIMKILN 69
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPNI++L+ +K +YLI+EYA+ GE++ L E+ A + + A+ YCH
Sbjct: 70 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 129
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESVEHDA 192
K ++HRD+K ENLL+ A +KIADFG+S + T CG+ Y PE+ + ++D
Sbjct: 130 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDG 189
Query: 193 -NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
VD+WSLGV+ Y + G PF+ + + R+++ + P +S+ ++L+ + LV
Sbjct: 190 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP--FYMSTDCENLLKRFLV 247
Query: 252 KDSSQRLPLHKLLEHPWI 269
+ +R L ++++ WI
Sbjct: 248 LNPIKRGTLEQIMKDRWI 265
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 154 bits (388), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 134/254 (52%), Gaps = 11/254 (4%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V +++ + A+KV+ K+ + LR EVE+ L HPNI++L+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKLFE 88
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
D Y++ E GEL+ E+ K K FSE AA + + + Y H +++HRD+K
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLK 148
Query: 144 PENLLIGAQG---ELKIADFGWSVHTFNRRRTM---CGTLDYLPPEMVESVEHDANVDIW 197
PEN+L+ ++ ++KI DFG S F + M GT Y+ PE++ +D D+W
Sbjct: 149 PENILLESKEKDCDIKIIDFGLST-CFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVW 206
Query: 198 SLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF--PPKPIVSSAAKDLISQMLVKDSS 255
S GV+ Y L G PPF K D +R+ F P +S AKDLI +ML S
Sbjct: 207 SAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPS 266
Query: 256 QRLPLHKLLEHPWI 269
R+ + LEHPWI
Sbjct: 267 LRITATQCLEHPWI 280
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 154 bits (388), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 146/258 (56%), Gaps = 6/258 (2%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ ++ + K +G+G F V LAR + VA+K++ K+QL + ++ +L REV I L
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ-KLFREVRIMKILN 72
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPNI++L+ +K +YLI+EYA+ GE++ L E+ A + + A+ YCH
Sbjct: 73 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 132
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESVEHDA 192
K ++HRD+K ENLL+ A +KIADFG+S + CG Y PE+ + ++D
Sbjct: 133 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDG 192
Query: 193 -NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
VD+WSLGV+ Y + G PF+ + + R+++ + P +S+ ++L+ + LV
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP--FYMSTDCENLLKRFLV 250
Query: 252 KDSSQRLPLHKLLEHPWI 269
+ +R L ++++ WI
Sbjct: 251 LNPIKRGTLEQIMKDRWI 268
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 153 bits (387), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 137/260 (52%), Gaps = 11/260 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
++I LG+G FG V +++ + A+KV+ K+ + LR EVE+ L HPN
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPN 82
Query: 78 ILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHV 137
I++L+ D Y++ E GEL+ E+ K K FSE AA + + + Y H ++
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 138 IHRDIKPENLLIGAQ---GELKIADFGWSVHTFNRRRTM---CGTLDYLPPEMVESVEHD 191
+HRD+KPEN+L+ ++ ++KI DFG S F + M GT Y+ PE++ +D
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLST-CFQQNTKMKDRIGTAYYIAPEVLRGT-YD 200
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF--PPKPIVSSAAKDLISQM 249
D+WS GV+ Y L G PPF K D +R+ F P +S AKDLI +M
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKM 260
Query: 250 LVKDSSQRLPLHKLLEHPWI 269
L S R+ + LEHPWI
Sbjct: 261 LTFHPSLRITATQCLEHPWI 280
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 153 bits (387), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 137/260 (52%), Gaps = 11/260 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
++I LG+G FG V +++ + A+KV+ K+ + LR EVE+ L HPN
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPN 82
Query: 78 ILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHV 137
I++L+ D Y++ E GEL+ E+ K K FSE AA + + + Y H ++
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 138 IHRDIKPENLLIGAQ---GELKIADFGWSVHTFNRRRTM---CGTLDYLPPEMVESVEHD 191
+HRD+KPEN+L+ ++ ++KI DFG S F + M GT Y+ PE++ +D
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLST-CFQQNTKMKDRIGTAYYIAPEVLRGT-YD 200
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF--PPKPIVSSAAKDLISQM 249
D+WS GV+ Y L G PPF K D +R+ F P +S AKDLI +M
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKM 260
Query: 250 LVKDSSQRLPLHKLLEHPWI 269
L S R+ + LEHPWI
Sbjct: 261 LTFHPSLRITATQCLEHPWI 280
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 153 bits (387), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 150/269 (55%), Gaps = 8/269 (2%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQ 62
S SA E+ + ++ + K +G+G F V LAR + VA+K++ K+QL S ++ +
Sbjct: 3 SATSADEQPH--IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ-K 59
Query: 63 LRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYV 122
L REV I L HPNI++L+ +K +YL+ EYA+ GE++ L E+ A
Sbjct: 60 LFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF 119
Query: 123 ASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVH-TF-NRRRTMCGTLDYL 180
+ A+ YCH K ++HRD+K ENLL+ A +KIADFG+S TF N+ CG Y
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYA 179
Query: 181 PPEMVESVEHDA-NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVS 239
PE+ + ++D VD+WSLGV+ Y + G PF+ + + R+++ + P S
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP--FYXS 237
Query: 240 SAAKDLISQMLVKDSSQRLPLHKLLEHPW 268
+ ++L+ + L+ + S+R L ++ + W
Sbjct: 238 TDCENLLKKFLILNPSKRGTLEQIXKDRW 266
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 144/272 (52%), Gaps = 14/272 (5%)
Query: 11 KRWTLNDF-DIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
R L+DF ++ LGRG VY ++K + ALKVL K+ ++ +R E+ +
Sbjct: 47 NRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI-----VRTEIGV 101
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARAL 129
L HPNI++L F + L+LE GEL+ + + Y+SER AA V + A+
Sbjct: 102 LLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAV 161
Query: 130 IYCHGKHVIHRDIKPENLLIGA---QGELKIADFGWS--VHTFNRRRTMCGTLDYLPPEM 184
Y H ++HRD+KPENLL LKIADFG S V +T+CGT Y PE+
Sbjct: 162 AYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEI 221
Query: 185 VESVEHDANVDIWSLGVLCYEFLYGVPPF-EAKEHSDTYRRIVQVDLKF--PPKPIVSSA 241
+ + VD+WS+G++ Y L G PF + + +RRI+ + F P VS
Sbjct: 222 LRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLN 281
Query: 242 AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
AKDL+ +++V D +RL + L+HPW+ A
Sbjct: 282 AKDLVRKLIVLDPKKRLTTFQALQHPWVTGKA 313
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 144/275 (52%), Gaps = 12/275 (4%)
Query: 5 VSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQ-LQQSQVEHQL 63
+ R +++F+ + LG+G FG V LAR K + + A+KVL K LQ VE +
Sbjct: 12 IGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTM 71
Query: 64 RREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA 123
+ + HP + +L+ F R++ ++E+ G+L +QK + F E RA Y A
Sbjct: 72 TEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAA 131
Query: 124 SLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGW---SVHTFNRRRTMCGTLDYL 180
+ AL++ H K +I+RD+K +N+L+ +G K+ADFG + T CGT DY+
Sbjct: 132 EIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYI 191
Query: 181 PPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSS 240
PE+++ + + VD W++GVL YE L G PFEA+ D + I+ ++ +P +
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP--TWLHE 249
Query: 241 AAKDLISQMLVKDSSQRLPL------HKLLEHPWI 269
A ++ + K+ + RL H +L HP+
Sbjct: 250 DATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFF 284
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 146/277 (52%), Gaps = 14/277 (5%)
Query: 5 VSAKEKKRWTLND-----FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQV 59
+ A E RW + +D LG G F V LA +KR+ +VA+K + K L+
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK-- 59
Query: 60 EHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAA 119
E + E+ + ++HPNI+ L + +YLI++ + GEL+ + + +++ER A+
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS 119
Query: 120 TYVASLARALIYCHGKHVIHRDIKPENLL---IGAQGELKIADFGWS--VHTFNRRRTMC 174
+ + A+ Y H ++HRD+KPENLL + ++ I+DFG S + T C
Sbjct: 120 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC 179
Query: 175 GTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF-- 232
GT Y+ PE++ + VD WS+GV+ Y L G PPF + + + +I++ + +F
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
Query: 233 PPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
P +S +AKD I ++ KD +R + L+HPWI
Sbjct: 240 PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 146/277 (52%), Gaps = 14/277 (5%)
Query: 5 VSAKEKKRWTLND-----FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQV 59
+ A E RW + +D LG G F V LA +KR+ +VA+K + K L+
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK-- 59
Query: 60 EHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAA 119
E + E+ + ++HPNI+ L + +YLI++ + GEL+ + + +++ER A+
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS 119
Query: 120 TYVASLARALIYCHGKHVIHRDIKPENLL---IGAQGELKIADFGWS--VHTFNRRRTMC 174
+ + A+ Y H ++HRD+KPENLL + ++ I+DFG S + T C
Sbjct: 120 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC 179
Query: 175 GTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF-- 232
GT Y+ PE++ + VD WS+GV+ Y L G PPF + + + +I++ + +F
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
Query: 233 PPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
P +S +AKD I ++ KD +R + L+HPWI
Sbjct: 240 PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 144/248 (58%), Gaps = 11/248 (4%)
Query: 18 FDIGKPLGRGKFGHVYLARE---KRSNHIVALKVLFKSQLQ-QSQVEHQLRREVEIQSHL 73
F++ K LG+G FG V+L R+ S H+ A+KVL K+ L+ + +V ++ R+ I + +
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERD--ILADV 87
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
HP +++L+ F + ++YLIL++ G+L+ L K F+E Y+A LA L + H
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLH 147
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRR---TMCGTLDYLPPEMVESVEH 190
+I+RD+KPEN+L+ +G +K+ DFG S + + + CGT++Y+ PE+V H
Sbjct: 148 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGH 207
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQML 250
+ D WS GVL +E L G PF+ K+ +T I++ L P +S+ A+ L+ +
Sbjct: 208 SHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMP--QFLSTEAQSLLRALF 265
Query: 251 VKDSSQRL 258
++ + RL
Sbjct: 266 KRNPANRL 273
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 146/277 (52%), Gaps = 14/277 (5%)
Query: 5 VSAKEKKRWTLND-----FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQV 59
+ A E RW + +D LG G F V LA +KR+ +VA+K + K L+
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK-- 59
Query: 60 EHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAA 119
E + E+ + ++HPNI+ L + +YLI++ + GEL+ + + +++ER A+
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS 119
Query: 120 TYVASLARALIYCHGKHVIHRDIKPENLL---IGAQGELKIADFGWS--VHTFNRRRTMC 174
+ + A+ Y H ++HRD+KPENLL + ++ I+DFG S + T C
Sbjct: 120 RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC 179
Query: 175 GTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF-- 232
GT Y+ PE++ + VD WS+GV+ Y L G PPF + + + +I++ + +F
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
Query: 233 PPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
P +S +AKD I ++ KD +R + L+HPWI
Sbjct: 240 PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 146/250 (58%), Gaps = 11/250 (4%)
Query: 16 NDFDIGKPLGRGKFGHVYLARE---KRSNHIVALKVLFKSQLQ-QSQVEHQLRREVEIQS 71
+ F++ K LG+G FG V+L ++ + + A+KVL K+ L+ + +V ++ R++ ++
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE- 82
Query: 72 HLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIY 131
+ HP I++L+ F + ++YLIL++ G+L+ L K F+E Y+A LA AL +
Sbjct: 83 -VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDH 141
Query: 132 CHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRR---TMCGTLDYLPPEMVESV 188
H +I+RD+KPEN+L+ +G +K+ DFG S + + + + CGT++Y+ PE+V
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
H + D WS GVL +E L G PF+ K+ +T I++ L P +S A+ L+
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP--QFLSPEAQSLLRM 259
Query: 249 MLVKDSSQRL 258
+ ++ + RL
Sbjct: 260 LFKRNPANRL 269
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 146/250 (58%), Gaps = 11/250 (4%)
Query: 16 NDFDIGKPLGRGKFGHVYLARE---KRSNHIVALKVLFKSQLQ-QSQVEHQLRREVEIQS 71
+ F++ K LG+G FG V+L ++ + + A+KVL K+ L+ + +V ++ R++ ++
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE- 83
Query: 72 HLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIY 131
+ HP I++L+ F + ++YLIL++ G+L+ L K F+E Y+A LA AL +
Sbjct: 84 -VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDH 142
Query: 132 CHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRR---TMCGTLDYLPPEMVESV 188
H +I+RD+KPEN+L+ +G +K+ DFG S + + + + CGT++Y+ PE+V
Sbjct: 143 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 202
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
H + D WS GVL +E L G PF+ K+ +T I++ L P +S A+ L+
Sbjct: 203 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP--QFLSPEAQSLLRM 260
Query: 249 MLVKDSSQRL 258
+ ++ + RL
Sbjct: 261 LFKRNPANRL 270
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 146/250 (58%), Gaps = 11/250 (4%)
Query: 16 NDFDIGKPLGRGKFGHVYLARE---KRSNHIVALKVLFKSQLQ-QSQVEHQLRREVEIQS 71
+ F++ K LG+G FG V+L ++ + + A+KVL K+ L+ + +V ++ R++ ++
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE- 82
Query: 72 HLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIY 131
+ HP I++L+ F + ++YLIL++ G+L+ L K F+E Y+A LA AL +
Sbjct: 83 -VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDH 141
Query: 132 CHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRR---TMCGTLDYLPPEMVESV 188
H +I+RD+KPEN+L+ +G +K+ DFG S + + + + CGT++Y+ PE+V
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
H + D WS GVL +E L G PF+ K+ +T I++ L P +S A+ L+
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP--QFLSPEAQSLLRM 259
Query: 249 MLVKDSSQRL 258
+ ++ + RL
Sbjct: 260 LFKRNPANRL 269
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 151 bits (382), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 145/276 (52%), Gaps = 14/276 (5%)
Query: 6 SAKEKKRWTLND-----FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVE 60
A E RW + +D LG G F V LA +KR+ +VA+K + K L+ E
Sbjct: 3 GAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGK--E 60
Query: 61 HQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT 120
+ E+ + ++HPNI+ L + +YLI++ + GEL+ + + +++ER A+
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR 120
Query: 121 YVASLARALIYCHGKHVIHRDIKPENLL---IGAQGELKIADFGWSV--HTFNRRRTMCG 175
+ + A+ Y H ++HRD+KPENLL + ++ I+DFG S + T CG
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Query: 176 TLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF--P 233
T Y+ PE++ + VD WS+GV+ Y L G PPF + + + +I++ + +F P
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP 240
Query: 234 PKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+S +AKD I ++ KD +R + L+HPWI
Sbjct: 241 YWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 150 bits (380), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 141/264 (53%), Gaps = 13/264 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
+++ K +G G FG L R+K+SN +VA+K + + + +++ ++RE+ LRHPN
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----KIDENVKREIINHRSLRHPN 75
Query: 78 ILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHV 137
I+R + +++EYA+ GEL++ + FSE A + L + YCH V
Sbjct: 76 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 135
Query: 138 IHRDIKPENLLIGAQ--GELKIADFGWSVHTF--NRRRTMCGTLDYLPPEMVESVEHDAN 193
HRD+K EN L+ LKI DFG+S + ++ ++ GT Y+ PE++ E+D
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK 195
Query: 194 V-DIWSLGVLCYEFLYGVPPFEAKEHSDTYR----RIVQVDLKFPPKPIVSSAAKDLISQ 248
V D+WS GV Y L G PFE E +R RI+ V P +S + LIS+
Sbjct: 196 VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISR 255
Query: 249 MLVKDSSQRLPLHKLLEHPWIIQN 272
+ V D ++R+ + ++ H W ++N
Sbjct: 256 IFVADPAKRISIPEIRNHEWFLKN 279
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 140/264 (53%), Gaps = 13/264 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
+++ K +G G FG L R+K+SN +VA+K + + + ++ ++RE+ LRHPN
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----KIAANVKREIINHRSLRHPN 76
Query: 78 ILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHV 137
I+R + +++EYA+ GEL++ + FSE A + L + YCH V
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 138 IHRDIKPENLLIGAQ--GELKIADFGWSVHTF--NRRRTMCGTLDYLPPEMVESVEHDAN 193
HRD+K EN L+ LKI DFG+S + ++ ++ GT Y+ PE++ E+D
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK 196
Query: 194 V-DIWSLGVLCYEFLYGVPPFEAKEHSDTYR----RIVQVDLKFPPKPIVSSAAKDLISQ 248
V D+WS GV Y L G PFE E +R RI+ V P +S + LIS+
Sbjct: 197 VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISR 256
Query: 249 MLVKDSSQRLPLHKLLEHPWIIQN 272
+ V D ++R+ + ++ H W ++N
Sbjct: 257 IFVADPAKRISIPEIRNHEWFLKN 280
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 148/260 (56%), Gaps = 19/260 (7%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNH----IVALKVLFKSQL-QQSQVEHQLRREVEI 69
+ +F++ K LG G +G V+L R K S H + A+KVL K+ + Q+++ R E ++
Sbjct: 53 IENFELLKVLGTGAYGKVFLVR-KISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQV 111
Query: 70 QSHLRH-PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
H+R P ++ L+ F + +++LIL+Y GEL+ L + + F+E YV + A
Sbjct: 112 LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLA 171
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS----VHTFNRRRTMCGTLDYLPPEM 184
L + H +I+RDIK EN+L+ + G + + DFG S R CGT++Y+ P++
Sbjct: 172 LEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDI 231
Query: 185 VESVE--HDANVDIWSLGVLCYEFLYGVPPF----EAKEHSDTYRRIVQVDLKFPPKPIV 238
V + HD VD WSLGVL YE L G PF E ++ RRI++ + +P + +
Sbjct: 232 VRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE--M 289
Query: 239 SSAAKDLISQMLVKDSSQRL 258
S+ AKDLI ++L+KD +RL
Sbjct: 290 SALAKDLIQRLLMKDPKKRL 309
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 134/234 (57%), Gaps = 4/234 (1%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQ 62
+ +++ ++ + ++ + K +G+G F V LAR + VA+K++ K+QL + ++ +
Sbjct: 2 NSITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQ-K 60
Query: 63 LRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYV 122
L REV I L HPNI++L+ +K +YL++EYA+ GE++ L E+ A
Sbjct: 61 LFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 120
Query: 123 ASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS--VHTFNRRRTMCGTLDYL 180
+ A+ YCH K+++HRD+K ENLL+ +KIADFG+S N+ T CG+ Y
Sbjct: 121 RQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYA 180
Query: 181 PPEMVESVEHDA-NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
PE+ + ++D VD+WSLGV+ Y + G PF+ + + R+++ + P
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 234
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 147 bits (372), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 139/259 (53%), Gaps = 9/259 (3%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
F+ + LG G F V LA EK + + A+K + K L+ E + E+ + ++H N
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGK--ESSIENEIAVLRKIKHEN 81
Query: 78 ILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHV 137
I+ L + +YL+++ + GEL+ + + +++E+ A+T + + A+ Y H +
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGI 141
Query: 138 IHRDIKPENLLIGAQGE---LKIADFGWSVH--TFNRRRTMCGTLDYLPPEMVESVEHDA 192
+HRD+KPENLL +Q E + I+DFG S + T CGT Y+ PE++ +
Sbjct: 142 VHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSK 201
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF--PPKPIVSSAAKDLISQML 250
VD WS+GV+ Y L G PPF + S + +I++ + +F P +S +AKD I ++
Sbjct: 202 AVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLM 261
Query: 251 VKDSSQRLPLHKLLEHPWI 269
KD ++R + HPWI
Sbjct: 262 EKDPNKRYTCEQAARHPWI 280
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 147 bits (372), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 140/264 (53%), Gaps = 13/264 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
+++ K +G G FG L R+K+SN +VA+K + + + +++ ++RE+ LRHPN
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----KIDENVKREIINHRSLRHPN 76
Query: 78 ILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHV 137
I+R + +++EYA+ GEL++ + FSE A + L + YCH V
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 138 IHRDIKPENLLIGAQ--GELKIADFGWSVHTF--NRRRTMCGTLDYLPPEMVESVEHDAN 193
HRD+K EN L+ LKI FG+S + ++ ++ GT Y+ PE++ E+D
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK 196
Query: 194 V-DIWSLGVLCYEFLYGVPPFEAKEHSDTYR----RIVQVDLKFPPKPIVSSAAKDLISQ 248
V D+WS GV Y L G PFE E +R RI+ V P +S + LIS+
Sbjct: 197 VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISR 256
Query: 249 MLVKDSSQRLPLHKLLEHPWIIQN 272
+ V D ++R+ + ++ H W ++N
Sbjct: 257 IFVADPAKRISIPEIRNHEWFLKN 280
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 147 bits (371), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 148/267 (55%), Gaps = 11/267 (4%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQ-LRREVEIQSHLR 74
+++ + + +G+G F V + + H A K++ +L S +HQ L RE I L+
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKL--SARDHQKLEREARICRLLK 61
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H NI+RL+ ++ YL+ + GEL++++ +Y+SE A+ + + A+++CH
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 121
Query: 135 KHVIHRDIKPENLLIGAQ---GELKIADFGWSVHTFNRRRT---MCGTLDYLPPEMVESV 188
V+HRD+KPENLL+ ++ +K+ADFG ++ ++ GT YL PE++
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKE 181
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKP--IVSSAAKDLI 246
+ VDIW+ GV+ Y L G PPF ++ Y++I FP V+ AK+LI
Sbjct: 182 AYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLI 241
Query: 247 SQMLVKDSSQRLPLHKLLEHPWIIQNA 273
+QML + ++R+ H+ L+HPW+ Q +
Sbjct: 242 NQMLTINPAKRITAHEALKHPWVCQRS 268
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 147 bits (370), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 139/258 (53%), Gaps = 7/258 (2%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQ-LQQSQVEHQLRREVEIQSHL 73
+ DF++ K LG+G FG V+LA K++N A+K L K L VE + + +
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
HP + ++ F ++ ++ ++EY G+L +Q C F RA Y A + L + H
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 136
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTF---NRRRTMCGTLDYLPPEMVESVEH 190
K +++RD+K +N+L+ G +KIADFG + CGT DY+ PE++ ++
Sbjct: 137 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKY 196
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQML 250
+ +VD WS GVL YE L G PF ++ + + I ++D F P+ + AKDL+ ++
Sbjct: 197 NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI-RMDNPFYPR-WLEKEAKDLLVKLF 254
Query: 251 VKDSSQRLPLH-KLLEHP 267
V++ +RL + + +HP
Sbjct: 255 VREPEKRLGVRGDIRQHP 272
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 141/264 (53%), Gaps = 13/264 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
+++ K +G G FG L R+K++N +VA+K + + + +++ ++RE+ LRHPN
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIERGE----KIDENVKREIINHRSLRHPN 76
Query: 78 ILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHV 137
I+R + +++EYA+ GEL++ + FSE A + L + Y H V
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQV 136
Query: 138 IHRDIKPENLLIGAQ--GELKIADFGWSVHTF--NRRRTMCGTLDYLPPEMVESVEHDAN 193
HRD+K EN L+ LKIADFG+S + ++ ++ GT Y+ PE++ E+D
Sbjct: 137 AHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGK 196
Query: 194 V-DIWSLGVLCYEFLYGVPPFEAKEHSDTYR----RIVQVDLKFPPKPIVSSAAKDLISQ 248
V D+WS GV Y L G PFE E +R RI+ V P +S + LIS+
Sbjct: 197 VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISR 256
Query: 249 MLVKDSSQRLPLHKLLEHPWIIQN 272
+ V D ++R+ + ++ H W ++N
Sbjct: 257 IFVADPAKRISIPEIRNHEWFLKN 280
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 139/264 (52%), Gaps = 13/264 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
+++ K +G G FG L R+K+SN +VA+K + + + +++ ++RE+ LRHPN
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----KIDENVKREIINHRSLRHPN 76
Query: 78 ILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHV 137
I+R + +++EYA+ GEL++ + FSE A + L + YCH V
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 138 IHRDIKPENLLIGAQ--GELKIADFGWSVHTF--NRRRTMCGTLDYLPPEMVESVEHDAN 193
HRD+K EN L+ LKI FG+S + ++ + GT Y+ PE++ E+D
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGK 196
Query: 194 V-DIWSLGVLCYEFLYGVPPFEAKEHSDTYR----RIVQVDLKFPPKPIVSSAAKDLISQ 248
V D+WS GV Y L G PFE E +R RI+ V P +S + LIS+
Sbjct: 197 VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISR 256
Query: 249 MLVKDSSQRLPLHKLLEHPWIIQN 272
+ V D ++R+ + ++ H W ++N
Sbjct: 257 IFVADPAKRISIPEIRNHEWFLKN 280
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 138/258 (53%), Gaps = 7/258 (2%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQ-LQQSQVEHQLRREVEIQSHL 73
+ DF + K LG+G FG V+LA K++N A+K L K L VE + + +
Sbjct: 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 75
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
HP + ++ F ++ ++ ++EY G+L +Q C F RA Y A + L + H
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 135
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTF---NRRRTMCGTLDYLPPEMVESVEH 190
K +++RD+K +N+L+ G +KIADFG + CGT DY+ PE++ ++
Sbjct: 136 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKY 195
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQML 250
+ +VD WS GVL YE L G PF ++ + + I ++D F P+ + AKDL+ ++
Sbjct: 196 NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI-RMDNPFYPR-WLEKEAKDLLVKLF 253
Query: 251 VKDSSQRLPLH-KLLEHP 267
V++ +RL + + +HP
Sbjct: 254 VREPEKRLGVRGDIRQHP 271
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 135/264 (51%), Gaps = 13/264 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
+D K +G G FG L R+K + +VA+K + + + ++ ++RE+ LRHPN
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG----AAIDENVQREIINHRSLRHPN 77
Query: 78 ILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHV 137
I+R + +I+EYA+ GELY+ + FSE A + L + YCH +
Sbjct: 78 IVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQI 137
Query: 138 IHRDIKPENLLIGAQ--GELKIADFGWSVHTF--NRRRTMCGTLDYLPPEMVESVEHDAN 193
HRD+K EN L+ LKI DFG+S + ++ ++ GT Y+ PE++ E+D
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGK 197
Query: 194 V-DIWSLGVLCYEFLYGVPPFEAKEHSDTYR----RIVQVDLKFPPKPIVSSAAKDLISQ 248
+ D+WS GV Y L G PFE E YR RI+ V P +S LIS+
Sbjct: 198 IADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISR 257
Query: 249 MLVKDSSQRLPLHKLLEHPWIIQN 272
+ V D + R+ + ++ H W ++N
Sbjct: 258 IFVADPATRISIPEIKTHSWFLKN 281
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 137/269 (50%), Gaps = 10/269 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
L+ +DI + LG G FG V+ E+ + + A K + + +R+E++ S LR
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET---VRKEIQTMSVLR 212
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKEL-QKCKYFSERRAATYVASLARALIYCH 133
HP ++ L+ F D + +I E+ + GEL++++ + SE A Y+ + + L + H
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 272
Query: 134 GKHVIHRDIKPENLLIGAQ--GELKIADFGWSVHTFNRR--RTMCGTLDYLPPEMVESVE 189
+ +H D+KPEN++ + ELK+ DFG + H ++ + GT ++ PE+ E
Sbjct: 273 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKP 332
Query: 190 HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAKDLIS 247
D+WS+GVL Y L G+ PF + +T R + D +S KD I
Sbjct: 333 VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR 392
Query: 248 QMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
++L+ D + R+ +H+ LEHPW+ P
Sbjct: 393 KLLLADPNTRMTIHQALEHPWLTPGNAPG 421
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 144 bits (364), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 137/269 (50%), Gaps = 10/269 (3%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
L+ +DI + LG G FG V+ E+ + + A K + + +R+E++ S LR
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET---VRKEIQTMSVLR 106
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKEL-QKCKYFSERRAATYVASLARALIYCH 133
HP ++ L+ F D + +I E+ + GEL++++ + SE A Y+ + + L + H
Sbjct: 107 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 166
Query: 134 GKHVIHRDIKPENLLIGAQ--GELKIADFGWSVHTFNRR--RTMCGTLDYLPPEMVESVE 189
+ +H D+KPEN++ + ELK+ DFG + H ++ + GT ++ PE+ E
Sbjct: 167 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKP 226
Query: 190 HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAKDLIS 247
D+WS+GVL Y L G+ PF + +T R + D +S KD I
Sbjct: 227 VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR 286
Query: 248 QMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
++L+ D + R+ +H+ LEHPW+ P
Sbjct: 287 KLLLADPNTRMTIHQALEHPWLTPGNAPG 315
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 144 bits (363), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 140/270 (51%), Gaps = 5/270 (1%)
Query: 6 SAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRR 65
+K R + + +G LG G FG V + + + H VA+K+L + +++ V +++R
Sbjct: 1 GSKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKR 60
Query: 66 EVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASL 125
E++ RHP+I++LY ++++EY + GEL+ + K E A +
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI 120
Query: 126 ARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRR--RTMCGTLDYLPPE 183
A+ YCH V+HRD+KPEN+L+ A KIADFG S + RT CG+ +Y PE
Sbjct: 121 LSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPE 180
Query: 184 MVES-VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAA 242
++ + VDIWS GV+ Y L G PF+ EH T + ++ + + P+ + S A
Sbjct: 181 VISGRLYAGPEVDIWSCGVILYALLCGTLPFD-DEHVPTLFKKIRGGVFYIPEYLNRSVA 239
Query: 243 KDLISQMLVKDSSQRLPLHKLLEHPWIIQN 272
L+ ML D +R + + EH W Q+
Sbjct: 240 T-LLMHMLQVDPLKRATIKDIREHEWFKQD 268
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 137/256 (53%), Gaps = 6/256 (2%)
Query: 20 IGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
I + LG G FG V LA ++ VALK + + L++S + ++ RE+ LRHP+I+
Sbjct: 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 80 RLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIH 139
+LY + +++EYA GEL+ + + K +E + + A+ YCH ++H
Sbjct: 73 KLYDVITTPTDIVMVIEYAG-GELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVH 131
Query: 140 RDIKPENLLIGAQGELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVES-VEHDANVDI 196
RD+KPENLL+ +KIADFG S + N +T CG+ +Y PE++ + VD+
Sbjct: 132 RDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDV 191
Query: 197 WSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQ 256
WS G++ Y L G PF+ + + ++++ P +S A+ LI +M+V D Q
Sbjct: 192 WSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMP--DFLSPGAQSLIRRMIVADPMQ 249
Query: 257 RLPLHKLLEHPWIIQN 272
R+ + ++ PW N
Sbjct: 250 RITIQEIRRDPWFNVN 265
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 143 bits (361), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 143/261 (54%), Gaps = 11/261 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQ-LRREVEIQSHLRHP 76
+ + + LG+G F V + + A K++ +L S +HQ L RE I L+HP
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKL--SARDHQKLEREARICRLLKHP 81
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
NI+RL+ ++ YLI + GEL++++ +Y+SE A+ + + A+++CH
Sbjct: 82 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 141
Query: 137 VIHRDIKPENLLIGAQ---GELKIADFGWSVHTFNRRRT---MCGTLDYLPPEMVESVEH 190
V+HRD+KPENLL+ ++ +K+ADFG ++ ++ GT YL PE++ +
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 201
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKP--IVSSAAKDLISQ 248
VD+W+ GV+ Y L G PPF ++ Y++I FP V+ AKDLI++
Sbjct: 202 GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 261
Query: 249 MLVKDSSQRLPLHKLLEHPWI 269
ML + S+R+ + L+HPWI
Sbjct: 262 MLTINPSKRITAAEALKHPWI 282
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 137/257 (53%), Gaps = 6/257 (2%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ ++ I K LG G FG V LA + VALK++ K L +S ++ ++ RE+ LR
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 71
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HP+I++LY + + +++EYA EL+ + + SE+ A + + A+ YCH
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 130
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVES-VEHD 191
++HRD+KPENLL+ +KIADFG S + N +T CG+ +Y PE++ +
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 190
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
VD+WS GV+ Y L PF+ + ++ I P +S A LI +ML+
Sbjct: 191 PEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP--KFLSPGAAGLIKRMLI 248
Query: 252 KDSSQRLPLHKLLEHPW 268
+ R+ +H++++ W
Sbjct: 249 VNPLNRISIHEIMQDDW 265
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 137/257 (53%), Gaps = 6/257 (2%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ ++ I K LG G FG V LA + VALK++ K L +S ++ ++ RE+ LR
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 72
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HP+I++LY + + +++EYA EL+ + + SE+ A + + A+ YCH
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 131
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVES-VEHD 191
++HRD+KPENLL+ +KIADFG S + N +T CG+ +Y PE++ +
Sbjct: 132 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 191
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
VD+WS GV+ Y L PF+ + ++ I P +S A LI +ML+
Sbjct: 192 PEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP--KFLSPGAAGLIKRMLI 249
Query: 252 KDSSQRLPLHKLLEHPW 268
+ R+ +H++++ W
Sbjct: 250 VNPLNRISIHEIMQDDW 266
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 137/257 (53%), Gaps = 6/257 (2%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ ++ I K LG G FG V LA + VALK++ K L +S ++ ++ RE+ LR
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 66
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HP+I++LY + + +++EYA EL+ + + SE+ A + + A+ YCH
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 125
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVES-VEHD 191
++HRD+KPENLL+ +KIADFG S + N +T CG+ +Y PE++ +
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 185
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
VD+WS GV+ Y L PF+ + ++ I P +S A LI +ML+
Sbjct: 186 PEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP--KFLSPGAAGLIKRMLI 243
Query: 252 KDSSQRLPLHKLLEHPW 268
+ R+ +H++++ W
Sbjct: 244 VNPLNRISIHEIMQDDW 260
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 137/257 (53%), Gaps = 6/257 (2%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ ++ I K LG G FG V LA + VALK++ K L +S ++ ++ RE+ LR
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 62
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HP+I++LY + + +++EYA EL+ + + SE+ A + + A+ YCH
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 121
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVES-VEHD 191
++HRD+KPENLL+ +KIADFG S + N +T CG+ +Y PE++ +
Sbjct: 122 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 181
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLV 251
VD+WS GV+ Y L PF+ + ++ I P +S A LI +ML+
Sbjct: 182 PEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP--KFLSPGAAGLIKRMLI 239
Query: 252 KDSSQRLPLHKLLEHPW 268
+ R+ +H++++ W
Sbjct: 240 VNPLNRISIHEIMQDDW 256
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 139/270 (51%), Gaps = 5/270 (1%)
Query: 6 SAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRR 65
+K R + + +G LG G FG V + + + H VA+K+L + +++ V +++R
Sbjct: 1 GSKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKR 60
Query: 66 EVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASL 125
E++ RHP+I++LY ++++EY + GEL+ + K E A +
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI 120
Query: 126 ARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRR--RTMCGTLDYLPPE 183
A+ YCH V+HRD+KPEN+L+ A KIADFG S + R CG+ +Y PE
Sbjct: 121 LSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPE 180
Query: 184 MVES-VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAA 242
++ + VDIWS GV+ Y L G PF+ EH T + ++ + + P+ + S A
Sbjct: 181 VISGRLYAGPEVDIWSCGVILYALLCGTLPFD-DEHVPTLFKKIRGGVFYIPEYLNRSVA 239
Query: 243 KDLISQMLVKDSSQRLPLHKLLEHPWIIQN 272
L+ ML D +R + + EH W Q+
Sbjct: 240 T-LLMHMLQVDPLKRATIKDIREHEWFKQD 268
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 145/267 (54%), Gaps = 11/267 (4%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQ-LRREVEIQSHLR 74
+D+ + + LG+G F V +K A K++ +L S +HQ L RE I L+
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKL--SARDHQKLEREARICRLLK 88
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPNI+RL+ ++ YL+ + GEL++++ +Y+SE A+ + + ++ + H
Sbjct: 89 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQ 148
Query: 135 KHVIHRDIKPENLLIGAQ---GELKIADFGWSVHTFNRRRT---MCGTLDYLPPEMVESV 188
++HRD+KPENLL+ ++ +K+ADFG ++ ++ GT YL PE++
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKD 208
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPK--PIVSSAAKDLI 246
+ VDIW+ GV+ Y L G PPF ++ Y++I FP V+ AK+LI
Sbjct: 209 PYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLI 268
Query: 247 SQMLVKDSSQRLPLHKLLEHPWIIQNA 273
+QML + ++R+ + L+HPW+ Q +
Sbjct: 269 NQMLTINPAKRITADQALKHPWVCQRS 295
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 147/267 (55%), Gaps = 11/267 (4%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQ-LRREVEIQSHLR 74
+++ + + LG+G F V + + A K++ +L S +HQ L RE I L+
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL--SARDHQKLEREARICRLLK 61
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPNI+RL+ ++ YL+ + GEL++++ +Y+SE A+ + + ++ +CH
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 135 KHVIHRDIKPENLLIGAQGE---LKIADFGWSVHTFNRRRT---MCGTLDYLPPEMVESV 188
++HRD+KPENLL+ ++ + +K+ADFG ++ ++ GT YL PE++
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKD 181
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPK--PIVSSAAKDLI 246
+ VD+W+ GV+ Y L G PPF ++ Y++I FP V+ AKDLI
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLI 241
Query: 247 SQMLVKDSSQRLPLHKLLEHPWIIQNA 273
++ML + ++R+ + L+HPWI Q +
Sbjct: 242 NKMLTINPAKRITASEALKHPWICQRS 268
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 140/269 (52%), Gaps = 21/269 (7%)
Query: 17 DFDI-GKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
D D+ KPLG G F K+SN A+K++ K +Q E + E H
Sbjct: 11 DLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCE-----GH 65
Query: 76 PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
PNI++L+ F+DQ +L++E GEL++ ++K K+FSE A+ + L A+ + H
Sbjct: 66 PNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDV 125
Query: 136 HVIHRDIKPENLLIGAQG---ELKIADFGWS---VHTFNRRRTMCGTLDYLPPEMVESVE 189
V+HRD+KPENLL + E+KI DFG++ +T C TL Y PE++
Sbjct: 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNG 185
Query: 190 HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-------DLKFPPKP--IVSS 240
+D + D+WSLGV+ Y L G PF++ + S T V++ D F + VS
Sbjct: 186 YDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQ 245
Query: 241 AAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
AKDLI +L D ++RL + L + W+
Sbjct: 246 EAKDLIQGLLTVDPNKRLKMSGLRYNEWL 274
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 138/263 (52%), Gaps = 11/263 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRREVEIQSHLR 74
+++G+ LG G+F V R+K + A K + K +L S+ ++ REV I +R
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPNI+ L+ F ++ V LILE + GEL+ L + + +E A ++ + + Y H
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 126
Query: 135 KHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESV 188
K + H D+KPEN+++ + +K+ DFG + + N + + GT +++ PE+V
Sbjct: 127 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYE 186
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPK--PIVSSAAKDLI 246
D+WS+GV+ Y L G PF + +T I V+ F + S AKD I
Sbjct: 187 PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFI 246
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
++LVKD +R+ + + LEH WI
Sbjct: 247 RRLLVKDPKRRMTIAQSLEHSWI 269
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 147/267 (55%), Gaps = 11/267 (4%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQ-LRREVEIQSHLR 74
+++ + + LG+G F V + + A K++ +L S +HQ L RE I L+
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL--SARDHQKLEREARICRLLK 61
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPNI+RL+ ++ YL+ + GEL++++ +Y+SE A+ + + ++ +CH
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 135 KHVIHRDIKPENLLIGAQGE---LKIADFGWSVHTFNRRRT---MCGTLDYLPPEMVESV 188
++HRD+KPENLL+ ++ + +K+ADFG ++ ++ GT YL PE++
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKD 181
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPK--PIVSSAAKDLI 246
+ VD+W+ GV+ Y L G PPF ++ Y++I FP V+ AKDLI
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLI 241
Query: 247 SQMLVKDSSQRLPLHKLLEHPWIIQNA 273
++ML + ++R+ + L+HPWI Q +
Sbjct: 242 NKMLTINPAKRITASEALKHPWICQRS 268
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 11/263 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRREVEIQSHLR 74
+D G+ LG GKF V REK + A K + K + + S+ + REV I ++
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPN++ L+ + ++ V LILE A GEL+ L + + +E A ++ + + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 135 KHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESV 188
+ H D+KPEN+++ + +KI DFG + + N + + GT +++ PE+V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAKDLI 246
D+WS+GV+ Y L G PF +T + V+ +F + S+ AKD I
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 252
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
++LVKD +R+ + L+HPWI
Sbjct: 253 RRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 140/271 (51%), Gaps = 12/271 (4%)
Query: 11 KRWTLNDF-DIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRRE 66
K+ + DF DIG+ LG G+F V REK + A K + K Q + S+ ++ RE
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIERE 65
Query: 67 VEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLA 126
V I + HPNI+ L+ + ++ V LILE + GEL+ L + + SE A +++ +
Sbjct: 66 VSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYL 180
+ Y H K + H D+KPEN+++ + +K+ DFG + + + + GT +++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 181 PPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--V 238
PE+V D+WS+GV+ Y L G PF +T I V F +
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
Query: 239 SSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
S AKD I ++LVK++ +RL + + L HPWI
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 145/275 (52%), Gaps = 18/275 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQL-----QQSQVEHQLRREVEIQ 70
+++ + K LG G G V LA E+++ VA+K++ K + +++ + E+EI
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
L HP I+++ +F D + Y++LE GEL+ ++ K E Y + A+
Sbjct: 70 KKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 131 YCHGKHVIHRDIKPENLLIGAQGE---LKIADFGWS--VHTFNRRRTMCGTLDYLPPEMV 185
Y H +IHRD+KPEN+L+ +Q E +KI DFG S + + RT+CGT YL PE++
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 188
Query: 186 ESV---EHDANVDIWSLGVLCYEFLYGVPPF-EAKEHSDTYRRIVQVDLKFPPK--PIVS 239
SV ++ VD WSLGV+ + L G PPF E + +I F P+ VS
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 248
Query: 240 SAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNAD 274
A DL+ ++LV D R + L HPW +Q+ D
Sbjct: 249 EKALDLVKKLLVVDPKARFTTEEALRHPW-LQDED 282
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 136/268 (50%), Gaps = 5/268 (1%)
Query: 8 KEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREV 67
K R + + +G LG G FG V + + + + H VA+K+L + +++ V ++RRE+
Sbjct: 8 KHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREI 67
Query: 68 EIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
+ RHP+I++LY +++++EY + GEL+ + K E+ + +
Sbjct: 68 QNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILS 127
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRR--RTMCGTLDYLPPEMV 185
+ YCH V+HRD+KPEN+L+ A KIADFG S + R CG+ +Y PE++
Sbjct: 128 GVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVI 187
Query: 186 ES-VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKD 244
+ VDIWS GV+ Y L G PF+ +++I D F ++ +
Sbjct: 188 SGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKI--CDGIFYTPQYLNPSVIS 245
Query: 245 LISQMLVKDSSQRLPLHKLLEHPWIIQN 272
L+ ML D +R + + EH W Q+
Sbjct: 246 LLKHMLQVDPMKRATIKDIREHEWFKQD 273
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 145/275 (52%), Gaps = 18/275 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQL-----QQSQVEHQLRREVEIQ 70
+++ + K LG G G V LA E+++ VA+K++ K + +++ + E+EI
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
L HP I+++ +F D + Y++LE GEL+ ++ K E Y + A+
Sbjct: 69 KKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 127
Query: 131 YCHGKHVIHRDIKPENLLIGAQGE---LKIADFGWS--VHTFNRRRTMCGTLDYLPPEMV 185
Y H +IHRD+KPEN+L+ +Q E +KI DFG S + + RT+CGT YL PE++
Sbjct: 128 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 187
Query: 186 ESV---EHDANVDIWSLGVLCYEFLYGVPPF-EAKEHSDTYRRIVQVDLKFPPK--PIVS 239
SV ++ VD WSLGV+ + L G PPF E + +I F P+ VS
Sbjct: 188 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 247
Query: 240 SAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNAD 274
A DL+ ++LV D R + L HPW +Q+ D
Sbjct: 248 EKALDLVKKLLVVDPKARFTTEEALRHPW-LQDED 281
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 145/275 (52%), Gaps = 18/275 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQL-----QQSQVEHQLRREVEIQ 70
+++ + K LG G G V LA E+++ VA+K++ K + +++ + E+EI
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
L HP I+++ +F D + Y++LE GEL+ ++ K E Y + A+
Sbjct: 70 KKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 131 YCHGKHVIHRDIKPENLLIGAQGE---LKIADFGWS--VHTFNRRRTMCGTLDYLPPEMV 185
Y H +IHRD+KPEN+L+ +Q E +KI DFG S + + RT+CGT YL PE++
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 188
Query: 186 ESV---EHDANVDIWSLGVLCYEFLYGVPPF-EAKEHSDTYRRIVQVDLKFPPK--PIVS 239
SV ++ VD WSLGV+ + L G PPF E + +I F P+ VS
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 248
Query: 240 SAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNAD 274
A DL+ ++LV D R + L HPW +Q+ D
Sbjct: 249 EKALDLVKKLLVVDPKARFTTEEALRHPW-LQDED 282
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 145/275 (52%), Gaps = 18/275 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQL-----QQSQVEHQLRREVEIQ 70
+++ + K LG G G V LA E+++ VA+K++ K + +++ + E+EI
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
L HP I+++ +F D + Y++LE GEL+ ++ K E Y + A+
Sbjct: 70 KKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 131 YCHGKHVIHRDIKPENLLIGAQGE---LKIADFGWS--VHTFNRRRTMCGTLDYLPPEMV 185
Y H +IHRD+KPEN+L+ +Q E +KI DFG S + + RT+CGT YL PE++
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 188
Query: 186 ESV---EHDANVDIWSLGVLCYEFLYGVPPF-EAKEHSDTYRRIVQVDLKFPPK--PIVS 239
SV ++ VD WSLGV+ + L G PPF E + +I F P+ VS
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 248
Query: 240 SAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNAD 274
A DL+ ++LV D R + L HPW +Q+ D
Sbjct: 249 EKALDLVKKLLVVDPKARFTTEEALRHPW-LQDED 282
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 138/263 (52%), Gaps = 11/263 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRREVEIQSHLR 74
+++G+ LG G+F V R+K + A K + K +L S+ ++ REV I +R
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPNI+ L+ F ++ V LILE + GEL+ L + + +E A ++ + + Y H
Sbjct: 74 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 133
Query: 135 KHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESV 188
K + H D+KPEN+++ + +K+ DFG + + N + + GT +++ PE+V
Sbjct: 134 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYE 193
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPK--PIVSSAAKDLI 246
D+WS+GV+ Y L G PF + +T I V+ F + S AKD I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFI 253
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
++LVKD +R+ + + LEH WI
Sbjct: 254 RRLLVKDPKRRMXIAQSLEHSWI 276
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 141 bits (355), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 138/263 (52%), Gaps = 11/263 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRREVEIQSHLR 74
+++G+ LG G+F V R+K + A K + K +L S+ ++ REV I +R
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPNI+ L+ F ++ V LILE + GEL+ L + + +E A ++ + + Y H
Sbjct: 88 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 147
Query: 135 KHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESV 188
K + H D+KPEN+++ + +K+ DFG + + N + + GT +++ PE+V
Sbjct: 148 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYE 207
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPK--PIVSSAAKDLI 246
D+WS+GV+ Y L G PF + +T I V+ F + S AKD I
Sbjct: 208 PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFI 267
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
++LVKD +R+ + + LEH WI
Sbjct: 268 RRLLVKDPKRRMXIAQSLEHSWI 290
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 145/275 (52%), Gaps = 18/275 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQL-----QQSQVEHQLRREVEIQ 70
+++ + K LG G G V LA E+++ VA+K++ K + +++ + E+EI
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
L HP I+++ +F D + Y++LE GEL+ ++ K E Y + A+
Sbjct: 76 KKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 134
Query: 131 YCHGKHVIHRDIKPENLLIGAQGE---LKIADFGWS--VHTFNRRRTMCGTLDYLPPEMV 185
Y H +IHRD+KPEN+L+ +Q E +KI DFG S + + RT+CGT YL PE++
Sbjct: 135 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 194
Query: 186 ESV---EHDANVDIWSLGVLCYEFLYGVPPF-EAKEHSDTYRRIVQVDLKFPPK--PIVS 239
SV ++ VD WSLGV+ + L G PPF E + +I F P+ VS
Sbjct: 195 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 254
Query: 240 SAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNAD 274
A DL+ ++LV D R + L HPW +Q+ D
Sbjct: 255 EKALDLVKKLLVVDPKARFTTEEALRHPW-LQDED 288
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 140 bits (353), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 145/267 (54%), Gaps = 21/267 (7%)
Query: 17 DFDIGKPLGRGKFGHV-----YLAREKRSNHIVALKVLFKSQLQQSQVEHQ-LRREVEIQ 70
++ + + LG+G F V LA ++ + I+ K L S +HQ L RE I
Sbjct: 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-------SARDHQKLEREARIC 64
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
L+HPNI+RL+ ++ YLI + GEL++++ +Y+SE A+ + + A++
Sbjct: 65 RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL 124
Query: 131 YCHGKHVIHRDIKPENLLIGAQ---GELKIADFGWSVHTFNRRRT---MCGTLDYLPPEM 184
+CH V+HR++KPENLL+ ++ +K+ADFG ++ ++ GT YL PE+
Sbjct: 125 HCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEV 184
Query: 185 VESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKP--IVSSAA 242
+ + VD+W+ GV+ Y L G PPF ++ Y++I FP V+ A
Sbjct: 185 LRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 244
Query: 243 KDLISQMLVKDSSQRLPLHKLLEHPWI 269
KDLI++ML + S+R+ + L+HPWI
Sbjct: 245 KDLINKMLTINPSKRITAAEALKHPWI 271
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 140 bits (353), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 136/263 (51%), Gaps = 11/263 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRREVEIQSHLR 74
+D G+ LG G+F V REK + A K + K + + S+ + REV I ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPN++ L+ + ++ V LILE A GEL+ L + + +E A ++ + + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 135 KHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESV 188
+ H D+KPEN+++ + +KI DFG + + N + + GT +++ PE+V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPK--PIVSSAAKDLI 246
D+WS+GV+ Y L G PF +T + V+ +F + S+ AKD I
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 252
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
++LVKD +R+ + L+HPWI
Sbjct: 253 RRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 140 bits (353), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 136/263 (51%), Gaps = 11/263 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRREVEIQSHLR 74
+D G+ LG G+F V REK + A K + K + + S+ + REV I ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPN++ L+ + ++ V LILE A GEL+ L + + +E A ++ + + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 135 KHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESV 188
+ H D+KPEN+++ + +KI DFG + + N + + GT +++ PE+V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAKDLI 246
D+WS+GV+ Y L G PF +T + V+ +F + S+ AKD I
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 252
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
++LVKD +R+ + L+HPWI
Sbjct: 253 RRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 140 bits (353), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 136/263 (51%), Gaps = 11/263 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRREVEIQSHLR 74
+D G+ LG G+F V REK + A K + K + + S+ + REV I ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPN++ L+ + ++ V LILE A GEL+ L + + +E A ++ + + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 135 KHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESV 188
+ H D+KPEN+++ + +KI DFG + + N + + GT +++ PE+V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPK--PIVSSAAKDLI 246
D+WS+GV+ Y L G PF +T + V+ +F + S+ AKD I
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 252
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
++LVKD +R+ + L+HPWI
Sbjct: 253 RRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 140 bits (353), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 136/263 (51%), Gaps = 11/263 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRREVEIQSHLR 74
+D G+ LG G+F V REK + A K + K + + S+ + REV I ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPN++ L+ + ++ V LILE A GEL+ L + + +E A ++ + + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 135 KHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESV 188
+ H D+KPEN+++ + +KI DFG + + N + + GT +++ PE+V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAKDLI 246
D+WS+GV+ Y L G PF +T + V+ +F + S+ AKD I
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 252
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
++LVKD +R+ + L+HPWI
Sbjct: 253 RRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 140 bits (353), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 136/263 (51%), Gaps = 11/263 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRREVEIQSHLR 74
+D G+ LG G+F V REK + A K + K + + S+ + REV I ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPN++ L+ + ++ V LILE A GEL+ L + + +E A ++ + + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 135 KHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESV 188
+ H D+KPEN+++ + +KI DFG + + N + + GT +++ PE+V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAKDLI 246
D+WS+GV+ Y L G PF +T + V+ +F + S+ AKD I
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 252
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
++LVKD +R+ + L+HPWI
Sbjct: 253 RRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 140 bits (352), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 136/263 (51%), Gaps = 11/263 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRREVEIQSHLR 74
+D G+ LG G+F V REK + A K + K + + S+ + REV I ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPN++ L+ + ++ V LILE A GEL+ L + + +E A ++ + + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 135 KHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESV 188
+ H D+KPEN+++ + +KI DFG + + N + + GT +++ PE+V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAKDLI 246
D+WS+GV+ Y L G PF +T + V+ +F + S+ AKD I
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 252
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
++LVKD +R+ + L+HPWI
Sbjct: 253 RRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 140 bits (352), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 136/263 (51%), Gaps = 11/263 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRREVEIQSHLR 74
+D G+ LG G+F V REK + A K + K + + S+ + REV I ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPN++ L+ + ++ V LILE A GEL+ L + + +E A ++ + + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 135 KHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESV 188
+ H D+KPEN+++ + +KI DFG + + N + + GT +++ PE+V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAKDLI 246
D+WS+GV+ Y L G PF +T + V+ +F + S+ AKD I
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 252
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
++LVKD +R+ + L+HPWI
Sbjct: 253 RRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 140 bits (352), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 136/263 (51%), Gaps = 11/263 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRREVEIQSHLR 74
+D G+ LG G+F V REK + A K + K + + S+ + REV I ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPN++ L+ + ++ V LILE A GEL+ L + + +E A ++ + + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 135 KHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESV 188
+ H D+KPEN+++ + +KI DFG + + N + + GT +++ PE+V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAKDLI 246
D+WS+GV+ Y L G PF +T + V+ +F + S+ AKD I
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 252
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
++LVKD +R+ + L+HPWI
Sbjct: 253 RRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 140 bits (352), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 137/251 (54%), Gaps = 6/251 (2%)
Query: 12 RWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQ-LQQSQVEHQLRREVEIQ 70
R L DF+ LG+G FG V LA K + + A+K+L K +Q VE + + +
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLA 74
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
+ P + +L+ F R+Y ++EY G+L +Q+ F E +A Y A ++ L
Sbjct: 75 LLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLF 134
Query: 131 YCHGKHVIHRDIKPENLLIGAQGELKIADFGWSV-HTFN--RRRTMCGTLDYLPPEMVES 187
+ H + +I+RD+K +N+++ ++G +KIADFG H + R CGT DY+ PE++
Sbjct: 135 FLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAY 194
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
+ +VD W+ GVL YE L G PPF+ ++ + ++ I++ ++ +P +S A +
Sbjct: 195 QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKS--LSKEAVSICK 252
Query: 248 QMLVKDSSQRL 258
++ K ++RL
Sbjct: 253 GLMTKHPAKRL 263
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 136/263 (51%), Gaps = 11/263 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRREVEIQSHLR 74
+D G+ LG G+F V REK + A K + K + + S+ + REV I ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPN++ L+ + ++ V LILE A GEL+ L + + +E A ++ + + Y H
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 135 KHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESV 188
+ H D+KPEN+++ + +KI DFG + + N + + GT +++ PE+V
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 191
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAKDLI 246
D+WS+GV+ Y L G PF +T + V+ +F + S+ AKD I
Sbjct: 192 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 251
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
++LVKD +R+ + L+HPWI
Sbjct: 252 RRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 136/263 (51%), Gaps = 11/263 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRREVEIQSHLR 74
+D G+ LG G+F V REK + A K + K + + S+ + REV I ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPN++ L+ + ++ V LILE A GEL+ L + + +E A ++ + + Y H
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 135 KHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESV 188
+ H D+KPEN+++ + +KI DFG + + N + + GT +++ PE+V
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 191
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAKDLI 246
D+WS+GV+ Y L G PF +T + V+ +F + S+ AKD I
Sbjct: 192 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 251
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
++LVKD +R+ + L+HPWI
Sbjct: 252 RRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 145/275 (52%), Gaps = 18/275 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQL-----QQSQVEHQLRREVEIQ 70
+++ + K LG G G V LA E+++ VA++++ K + +++ + E+EI
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
L HP I+++ +F D + Y++LE GEL+ ++ K E Y + A+
Sbjct: 209 KKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 267
Query: 131 YCHGKHVIHRDIKPENLLIGAQGE---LKIADFGWS--VHTFNRRRTMCGTLDYLPPEMV 185
Y H +IHRD+KPEN+L+ +Q E +KI DFG S + + RT+CGT YL PE++
Sbjct: 268 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 327
Query: 186 ESV---EHDANVDIWSLGVLCYEFLYGVPPF-EAKEHSDTYRRIVQVDLKFPPK--PIVS 239
SV ++ VD WSLGV+ + L G PPF E + +I F P+ VS
Sbjct: 328 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 387
Query: 240 SAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNAD 274
A DL+ ++LV D R + L HPW +Q+ D
Sbjct: 388 EKALDLVKKLLVVDPKARFTTEEALRHPW-LQDED 421
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 145/275 (52%), Gaps = 18/275 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQL-----QQSQVEHQLRREVEIQ 70
+++ + K LG G G V LA E+++ VA++++ K + +++ + E+EI
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
L HP I+++ +F D + Y++LE GEL+ ++ K E Y + A+
Sbjct: 195 KKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 253
Query: 131 YCHGKHVIHRDIKPENLLIGAQGE---LKIADFGWS--VHTFNRRRTMCGTLDYLPPEMV 185
Y H +IHRD+KPEN+L+ +Q E +KI DFG S + + RT+CGT YL PE++
Sbjct: 254 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 313
Query: 186 ESV---EHDANVDIWSLGVLCYEFLYGVPPF-EAKEHSDTYRRIVQVDLKFPPK--PIVS 239
SV ++ VD WSLGV+ + L G PPF E + +I F P+ VS
Sbjct: 314 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 373
Query: 240 SAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNAD 274
A DL+ ++LV D R + L HPW +Q+ D
Sbjct: 374 EKALDLVKKLLVVDPKARFTTEEALRHPW-LQDED 407
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 135/263 (51%), Gaps = 11/263 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRREVEIQSHLR 74
+D G+ LG G+F V REK + A K + K + + S+ + REV I ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPN++ L+ + ++ V LILE A GEL+ L + + +E A ++ + + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 135 KHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESV 188
+ H D+KPEN+++ + +KI DFG + + N + + GT ++ PE+V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYE 192
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPK--PIVSSAAKDLI 246
D+WS+GV+ Y L G PF +T + V+ +F + S+ AKD I
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 252
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
++LVKD +R+ + L+HPWI
Sbjct: 253 RRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 131/259 (50%), Gaps = 11/259 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
+ + +GRG +G V +A +K + A K + K ++ + ++E+EI L HPN
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVD---RFKQEIEIMKSLDHPN 84
Query: 78 ILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHV 137
I+RLY F D +YL++E GEL++ + + F E AA + + A+ YCH +V
Sbjct: 85 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 144
Query: 138 IHRDIKPENLLI---GAQGELKIADFGWSVH--TFNRRRTMCGTLDYLPPEMVESVEHDA 192
HRD+KPEN L LK+ DFG + RT GT Y+ P+++E + +
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGP 203
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAKDLISQML 250
D WS GV+ Y L G PPF A + +I + FP K VS A+ LI ++L
Sbjct: 204 ECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLL 263
Query: 251 VKDSSQRLPLHKLLEHPWI 269
K QR+ + LEH W
Sbjct: 264 TKSPKQRITSLQALEHEWF 282
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 138/261 (52%), Gaps = 8/261 (3%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+++D+ + LG+G F V K + A K++ +L + +L RE I L+H
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQH 87
Query: 76 PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
PNI+RL+ ++ YL+ + GEL++++ +++SE A+ + + ++ YCH
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 147
Query: 136 HVIHRDIKPENLLIGAQGE---LKIADFGWSVHTFNRR--RTMCGTLDYLPPEMVESVEH 190
++HR++KPENLL+ ++ + +K+ADFG ++ + GT YL PE+++ +
Sbjct: 148 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY 207
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV--QVDLKFPPKPIVSSAAKDLISQ 248
VDIW+ GV+ Y L G PPF ++ Y +I D P V+ AK LI
Sbjct: 208 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS 267
Query: 249 MLVKDSSQRLPLHKLLEHPWI 269
ML + +R+ + L+ PWI
Sbjct: 268 MLTVNPKKRITADQALKVPWI 288
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 138/261 (52%), Gaps = 8/261 (3%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+++D+ + LG+G F V K + A K++ +L + +L RE I L+H
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQH 63
Query: 76 PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
PNI+RL+ ++ YL+ + GEL++++ +++SE A+ + + ++ YCH
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 123
Query: 136 HVIHRDIKPENLLIGAQGE---LKIADFGWSVHTFNRR--RTMCGTLDYLPPEMVESVEH 190
++HR++KPENLL+ ++ + +K+ADFG ++ + GT YL PE+++ +
Sbjct: 124 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY 183
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV--QVDLKFPPKPIVSSAAKDLISQ 248
VDIW+ GV+ Y L G PPF ++ Y +I D P V+ AK LI
Sbjct: 184 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS 243
Query: 249 MLVKDSSQRLPLHKLLEHPWI 269
ML + +R+ + L+ PWI
Sbjct: 244 MLTVNPKKRITADQALKVPWI 264
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 138/261 (52%), Gaps = 8/261 (3%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+++D+ + LG+G F V K + A K++ +L + +L RE I L+H
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQH 64
Query: 76 PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
PNI+RL+ ++ YL+ + GEL++++ +++SE A+ + + ++ YCH
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 136 HVIHRDIKPENLLIGAQGE---LKIADFGWSVHTFNRR--RTMCGTLDYLPPEMVESVEH 190
++HR++KPENLL+ ++ + +K+ADFG ++ + GT YL PE+++ +
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY 184
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV--QVDLKFPPKPIVSSAAKDLISQ 248
VDIW+ GV+ Y L G PPF ++ Y +I D P V+ AK LI
Sbjct: 185 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS 244
Query: 249 MLVKDSSQRLPLHKLLEHPWI 269
ML + +R+ + L+ PWI
Sbjct: 245 MLTVNPKKRITADQALKVPWI 265
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 131/259 (50%), Gaps = 11/259 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
+ + +GRG +G V +A +K + A K + K ++ + ++E+EI L HPN
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVD---RFKQEIEIMKSLDHPN 67
Query: 78 ILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHV 137
I+RLY F D +YL++E GEL++ + + F E AA + + A+ YCH +V
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 127
Query: 138 IHRDIKPENLLI---GAQGELKIADFGWSVH--TFNRRRTMCGTLDYLPPEMVESVEHDA 192
HRD+KPEN L LK+ DFG + RT GT Y+ P+++E + +
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGP 186
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAKDLISQML 250
D WS GV+ Y L G PPF A + +I + FP K VS A+ LI ++L
Sbjct: 187 ECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLL 246
Query: 251 VKDSSQRLPLHKLLEHPWI 269
K QR+ + LEH W
Sbjct: 247 TKSPKQRITSLQALEHEWF 265
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 138/261 (52%), Gaps = 8/261 (3%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+++D+ + LG+G F V K + A K++ +L + +L RE I L+H
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQH 64
Query: 76 PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
PNI+RL+ ++ YL+ + GEL++++ +++SE A+ + + ++ YCH
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 136 HVIHRDIKPENLLIGAQGE---LKIADFGWSVHTFNRR--RTMCGTLDYLPPEMVESVEH 190
++HR++KPENLL+ ++ + +K+ADFG ++ + GT YL PE+++ +
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY 184
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV--QVDLKFPPKPIVSSAAKDLISQ 248
VDIW+ GV+ Y L G PPF ++ Y +I D P V+ AK LI
Sbjct: 185 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS 244
Query: 249 MLVKDSSQRLPLHKLLEHPWI 269
ML + +R+ + L+ PWI
Sbjct: 245 MLTVNPKKRITADQALKVPWI 265
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 135/263 (51%), Gaps = 11/263 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRREVEIQSHLR 74
+D G+ LG G F V REK + A K + K + + S+ + REV I ++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPN++ L+ + ++ V LILE A GEL+ L + + +E A ++ + + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 135 KHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESV 188
+ H D+KPEN+++ + +KI DFG + + N + + GT +++ PE+V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAKDLI 246
D+WS+GV+ Y L G PF +T + V+ +F + S+ AKD I
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 252
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
++LVKD +R+ + L+HPWI
Sbjct: 253 RRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 131/256 (51%), Gaps = 9/256 (3%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG G F V+L +++ + + ALK + KS + + L E+ + ++H NI+ L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR---DSSLENEIAVLKKIKHENIVTLED 73
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ YL+++ + GEL+ + + ++E+ A+ + + A+ Y H ++HRD+K
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLK 133
Query: 144 PENLLIGAQGE---LKIADFGWSVHTFNR-RRTMCGTLDYLPPEMVESVEHDANVDIWSL 199
PENLL E + I DFG S N T CGT Y+ PE++ + VD WS+
Sbjct: 134 PENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSI 193
Query: 200 GVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF--PPKPIVSSAAKDLISQMLVKDSSQR 257
GV+ Y L G PPF + S + +I + +F P +S +AKD I +L KD ++R
Sbjct: 194 GVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNER 253
Query: 258 LPLHKLLEHPWIIQNA 273
K L HPWI N
Sbjct: 254 YTCEKALSHPWIDGNT 269
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 139/271 (51%), Gaps = 20/271 (7%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQS----------QVEHQLRREVEIQS 71
+ LG G +G V L +EK + A+KV+ KSQ + + ++ E+ +
Sbjct: 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 72 HLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIY 131
L HPNI++L+ F D+K YL+ E+ GEL++++ F E AA + + + Y
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICY 161
Query: 132 CHGKHVIHRDIKPENLLIGAQGEL---KIADFGWSVHTFNRR---RTMCGTLDYLPPEMV 185
H +++HRDIKPEN+L+ + L KI DFG S F++ R GT Y+ PE++
Sbjct: 162 LHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF-FSKDYKLRDRLGTAYYIAPEVL 220
Query: 186 ESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVD--LKFPPKPIVSSAAK 243
+ +++ D+WS GV+ Y L G PPF + D +++ + F +S AK
Sbjct: 221 KK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAK 279
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPWIIQNAD 274
+LI ML D ++R + L WI + A+
Sbjct: 280 ELIKLMLTYDYNKRCTAEEALNSRWIKKYAN 310
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 138 bits (347), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 135/256 (52%), Gaps = 12/256 (4%)
Query: 10 KKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQ-LQQSQVEHQLRREVE 68
+ R L DF+ LG+G FG V L+ K ++ + A+K+L K +Q VE + +
Sbjct: 14 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRV 73
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
+ + P + +L+ F R+Y ++EY G+L +Q+ F E A Y A +A
Sbjct: 74 LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG 133
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFG------WSVHTFNRRRTMCGTLDYLPP 182
L + K +I+RD+K +N+++ ++G +KIADFG W T + CGT DY+ P
Sbjct: 134 LFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT---TKXFCGTPDYIAP 190
Query: 183 EMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAA 242
E++ + +VD W+ GVL YE L G PFE ++ + ++ I++ ++ +P +S A
Sbjct: 191 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS--MSKEA 248
Query: 243 KDLISQMLVKDSSQRL 258
+ ++ K +RL
Sbjct: 249 VAICKGLMTKHPGKRL 264
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 142/270 (52%), Gaps = 22/270 (8%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ-SHLR 74
+ + + + +G G + K +N A+KV+ KS+ S+ E+EI + +
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE-------EIEILLRYGQ 79
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPNI+ L + D K VYL+ E GEL ++ + K+FSER A+ + ++ + + Y H
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 135 KHVIHRDIKPENLL-IGAQGE---LKIADFGWSVHTFNRR---RTMCGTLDYLPPEMVES 187
+ V+HRD+KP N+L + G L+I DFG++ T C T +++ PE+++
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKR 199
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV------QVDLKFPPKPIVSSA 241
+D DIWSLG+L Y L G PF A SDT I+ + L VS
Sbjct: 200 QGYDEGCDIWSLGILLYTMLAGYTPF-ANGPSDTPEEILTRIGSGKFTLSGGNWNTVSET 258
Query: 242 AKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
AKDL+S+ML D QRL ++L+HPW+ Q
Sbjct: 259 AKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 142/270 (52%), Gaps = 22/270 (8%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ-SHLR 74
+ + + + +G G + K +N A+KV+ KS+ S+ E+EI + +
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE-------EIEILLRYGQ 79
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPNI+ L + D K VYL+ E GEL ++ + K+FSER A+ + ++ + + Y H
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 135 KHVIHRDIKPENLL-IGAQGE---LKIADFGWSVHTFNRR---RTMCGTLDYLPPEMVES 187
+ V+HRD+KP N+L + G L+I DFG++ T C T +++ PE+++
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKR 199
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV------QVDLKFPPKPIVSSA 241
+D DIWSLG+L Y L G PF A SDT I+ + L VS
Sbjct: 200 QGYDEGCDIWSLGILLYTMLAGYTPF-ANGPSDTPEEILTRIGSGKFTLSGGNWNTVSET 258
Query: 242 AKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
AKDL+S+ML D QRL ++L+HPW+ Q
Sbjct: 259 AKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 144/290 (49%), Gaps = 39/290 (13%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR-HPNILRLY 82
LG G + V A ++ A+K++ K Q ++ REVE + + NIL L
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEK---QAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 83 GYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDI 142
+F D R YL+ E G + +QK K+F+ER A+ V +A AL + H K + HRD+
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDL 137
Query: 143 KPENLLIGAQ---GELKIADF----GWSVH------TFNRRRTMCGTLDYLPPEMVE--- 186
KPEN+L + +KI DF G ++ T T CG+ +Y+ PE+VE
Sbjct: 138 KPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFT 197
Query: 187 --SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDT---------------YRRIVQVD 229
+ +D D+WSLGV+ Y L G PPF +D + I +
Sbjct: 198 DQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGK 257
Query: 230 LKFPPKPI--VSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPSG 277
+FP K +SS AKDLIS++LV+D+ QRL ++L+HPW+ A G
Sbjct: 258 YEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQAPEKG 307
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 135/256 (52%), Gaps = 12/256 (4%)
Query: 10 KKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQ-LQQSQVEHQLRREVE 68
+ R L DF+ LG+G FG V L+ K ++ + A+K+L K +Q VE + +
Sbjct: 335 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRV 394
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
+ + P + +L+ F R+Y ++EY G+L +Q+ F E A Y A +A
Sbjct: 395 LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG 454
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFG------WSVHTFNRRRTMCGTLDYLPP 182
L + K +I+RD+K +N+++ ++G +KIADFG W T + CGT DY+ P
Sbjct: 455 LFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT---TKXFCGTPDYIAP 511
Query: 183 EMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAA 242
E++ + +VD W+ GVL YE L G PFE ++ + ++ I++ ++ +P +S A
Sbjct: 512 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS--MSKEA 569
Query: 243 KDLISQMLVKDSSQRL 258
+ ++ K +RL
Sbjct: 570 VAICKGLMTKHPGKRL 585
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 135/263 (51%), Gaps = 11/263 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRREVEIQSHLR 74
+D G+ LG G+F V REK + A K + K + + S+ + REV I ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPN++ L+ + ++ V LI E A GEL+ L + + +E A ++ + + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 135 KHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESV 188
+ H D+KPEN+++ + +KI DFG + + N + + GT +++ PE+V
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAKDLI 246
D+WS+GV+ Y L G PF +T + V+ +F + S+ AKD I
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 252
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
++LVKD +R+ + L+HPWI
Sbjct: 253 RRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 137 bits (344), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 139/271 (51%), Gaps = 12/271 (4%)
Query: 11 KRWTLNDF-DIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRRE 66
K+ + DF DIG+ LG G+F V REK + A K + K Q + S+ ++ RE
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 67 VEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLA 126
V I + H N++ L+ + ++ V LILE + GEL+ L + + SE A +++ +
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYL 180
+ Y H K + H D+KPEN+++ + +K+ DFG + + + + GT +++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 181 PPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--V 238
PE+V D+WS+GV+ Y L G PF +T I V F +
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
Query: 239 SSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
S AKD I ++LVK++ +RL + + L HPWI
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 137 bits (344), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 139/271 (51%), Gaps = 12/271 (4%)
Query: 11 KRWTLNDF-DIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRRE 66
K+ + DF DIG+ LG G+F V REK + A K + K Q + S+ ++ RE
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 67 VEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLA 126
V I + H N++ L+ + ++ V LILE + GEL+ L + + SE A +++ +
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYL 180
+ Y H K + H D+KPEN+++ + +K+ DFG + + + + GT +++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 181 PPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--V 238
PE+V D+WS+GV+ Y L G PF +T I V F +
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
Query: 239 SSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
S AKD I ++LVK++ +RL + + L HPWI
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 139/271 (51%), Gaps = 12/271 (4%)
Query: 11 KRWTLNDF-DIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRRE 66
K+ + DF DIG+ LG G+F V REK + A K + K Q + S+ ++ RE
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 67 VEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLA 126
V I + H N++ L+ + ++ V LILE + GEL+ L + + SE A +++ +
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYL 180
+ Y H K + H D+KPEN+++ + +K+ DFG + + + + GT +++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 181 PPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--V 238
PE+V D+WS+GV+ Y L G PF +T I V F +
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
Query: 239 SSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
S AKD I ++LVK++ +RL + + L HPWI
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 139/271 (51%), Gaps = 12/271 (4%)
Query: 11 KRWTLNDF-DIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRRE 66
K+ + DF DIG+ LG G+F V REK + A K + K Q + S+ ++ RE
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 67 VEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLA 126
V I + H N++ L+ + ++ V LILE + GEL+ L + + SE A +++ +
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYL 180
+ Y H K + H D+KPEN+++ + +K+ DFG + + + + GT +++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 181 PPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--V 238
PE+V D+WS+GV+ Y L G PF +T I V F +
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
Query: 239 SSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
S AKD I ++LVK++ +RL + + L HPWI
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 136/265 (51%), Gaps = 5/265 (1%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
T+ + G+ LG+G F Y + + + A KV+ KS L + + ++ E+ I L
Sbjct: 40 TMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL 99
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
+P+++ +G+F D VY++LE + L + ++ K +E A ++ + + Y H
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 159
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FN--RRRTMCGTLDYLPPEMVESVEH 190
VIHRD+K NL + ++KI DFG + F+ R++T+CGT +Y+ PE++ H
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGH 219
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQML 250
VDIWSLG + Y L G PPFE +TY RI + + P ++ A LI +ML
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH--INPVASALIRRML 277
Query: 251 VKDSSQRLPLHKLLEHPWIIQNADP 275
D + R + +LL + P
Sbjct: 278 HADPTLRPSVAELLTDEFFTSGYAP 302
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 139/271 (51%), Gaps = 12/271 (4%)
Query: 11 KRWTLNDF-DIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ---VEHQLRRE 66
K+ + DF DIG+ LG G+F V REK + A K + K Q + S+ ++ RE
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 67 VEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLA 126
V I + H N++ L+ + ++ V LILE + GEL+ L + + SE A +++ +
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQG----ELKIADFGWS--VHTFNRRRTMCGTLDYL 180
+ Y H K + H D+KPEN+++ + +K+ DFG + + + + GT +++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 181 PPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--V 238
PE+V D+WS+GV+ Y L G PF +T I V F +
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
Query: 239 SSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
S AKD I ++LVK++ +RL + + L HPWI
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 129/256 (50%), Gaps = 5/256 (1%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G F + + + + A K++ KS L + ++ E+ I L H +++ +G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+F D V+++LE + L + ++ K +E A Y+ + Y H VIHRD+K
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 144 PENLLIGAQGELKIADFGWSV---HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
NL + E+KI DFG + + R++T+CGT +Y+ PE++ H VD+WS+G
Sbjct: 145 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIG 204
Query: 201 VLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPL 260
+ Y L G PPFE +TY RI + + P ++ A LI +ML D + R +
Sbjct: 205 CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH--INPVAASLIQKMLQTDPTARPTI 262
Query: 261 HKLLEHPWIIQNADPS 276
++LL + P+
Sbjct: 263 NELLNDEFFTSGYIPA 278
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 140/269 (52%), Gaps = 22/269 (8%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ-SHLR 74
+ +++ + +G G + K +N A+K++ KS+ ++ E+EI + +
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTE-------EIEILLRYGQ 74
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPNI+ L + D K VY++ E GEL ++ + K+FSER A+ + ++ + + Y H
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 135 KHVIHRDIKPENLLI----GAQGELKIADFGWSVHTFNRR---RTMCGTLDYLPPEMVES 187
+ V+HRD+KP N+L G ++I DFG++ T C T +++ PE++E
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLER 194
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV------QVDLKFPPKPIVSSA 241
+DA DIWSLGVL Y L G PF A DT I+ + L VS
Sbjct: 195 QGYDAACDIWSLGVLLYTMLTGYTPF-ANGPDDTPEEILARIGSGKFSLSGGYWNSVSDT 253
Query: 242 AKDLISQMLVKDSSQRLPLHKLLEHPWII 270
AKDL+S+ML D QRL +L HPWI+
Sbjct: 254 AKDLVSKMLHVDPHQRLTAALVLRHPWIV 282
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 134/266 (50%), Gaps = 15/266 (5%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
D+D+ K +GRG FG V L R K S + A+K+L K ++ + E +I + P
Sbjct: 76 DYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 135
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
+++L+ F D K +Y+++EY G+L L E+ A Y A + AL H
Sbjct: 136 WVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSMG 194
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMC----GTLDYLPPEMVESVEHDA 192
+IHRD+KP+N+L+ G LK+ADFG + C GT DY+ PE+++S D
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDG 254
Query: 193 ----NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV--QVDLKFPPKPIVSSAAKDLI 246
D WS+GV +E L G PF A TY +I+ + L FP +S AK+LI
Sbjct: 255 YYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLI 314
Query: 247 SQMLVKDSSQRL---PLHKLLEHPWI 269
L D RL + ++ +HP+
Sbjct: 315 CAFLT-DREVRLGRNGVEEIKQHPFF 339
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 129/256 (50%), Gaps = 5/256 (1%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G F + + + + A K++ KS L + ++ E+ I L H +++ +G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+F D V+++LE + L + ++ K +E A Y+ + Y H VIHRD+K
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 144 PENLLIGAQGELKIADFGWSV---HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
NL + E+KI DFG + + R++T+CGT +Y+ PE++ H VD+WS+G
Sbjct: 145 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIG 204
Query: 201 VLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPL 260
+ Y L G PPFE +TY RI + + P ++ A LI +ML D + R +
Sbjct: 205 CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH--INPVAASLIQKMLQTDPTARPTI 262
Query: 261 HKLLEHPWIIQNADPS 276
++LL + P+
Sbjct: 263 NELLNDEFFTSGYIPA 278
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 129/256 (50%), Gaps = 5/256 (1%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G F + + + + A K++ KS L + ++ E+ I L H +++ +G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+F D V+++LE + L + ++ K +E A Y+ + Y H VIHRD+K
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 148
Query: 144 PENLLIGAQGELKIADFGWSV---HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
NL + E+KI DFG + + R++T+CGT +Y+ PE++ H VD+WS+G
Sbjct: 149 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIG 208
Query: 201 VLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPL 260
+ Y L G PPFE +TY RI + + P ++ A LI +ML D + R +
Sbjct: 209 CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH--INPVAASLIQKMLQTDPTARPTI 266
Query: 261 HKLLEHPWIIQNADPS 276
++LL + P+
Sbjct: 267 NELLNDEFFTSGYIPA 282
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 134/260 (51%), Gaps = 9/260 (3%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
+++ + +G G F V LA + +VA+K++ K+ L +++ E+E +LRH +
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLP--RIKTEIEALKNLRHQH 69
Query: 78 ILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHV 137
I +LY +++++LEY GEL+ + SE + A+ Y H +
Sbjct: 70 ICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGY 129
Query: 138 IHRDIKPENLLIGAQGELKIADFGWSVHTFNRR----RTMCGTLDYLPPEMVESVEH-DA 192
HRD+KPENLL +LK+ DFG + +T CG+L Y PE+++ + +
Sbjct: 130 AHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGS 189
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVK 252
D+WS+G+L Y + G PF+ Y++I++ P +S ++ L+ QML
Sbjct: 190 EADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVP--KWLSPSSILLLQQMLQV 247
Query: 253 DSSQRLPLHKLLEHPWIIQN 272
D +R+ + LL HPWI+Q+
Sbjct: 248 DPKKRISMKNLLNHPWIMQD 267
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 135/265 (50%), Gaps = 5/265 (1%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
T+ + G+ LG+G F Y + + + A KV+ KS L + + ++ E+ I L
Sbjct: 40 TMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL 99
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
+P+++ +G+F D VY++LE + L + ++ K +E A ++ + + Y H
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 159
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FN--RRRTMCGTLDYLPPEMVESVEH 190
VIHRD+K NL + ++KI DFG + F+ R++ +CGT +Y+ PE++ H
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 219
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQML 250
VDIWSLG + Y L G PPFE +TY RI + + P ++ A LI +ML
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH--INPVASALIRRML 277
Query: 251 VKDSSQRLPLHKLLEHPWIIQNADP 275
D + R + +LL + P
Sbjct: 278 HADPTLRPSVAELLTDEFFTSGYAP 302
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 135/265 (50%), Gaps = 5/265 (1%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
T+ + G+ LG+G F Y + + + A KV+ KS L + + ++ E+ I L
Sbjct: 40 TMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL 99
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
+P+++ +G+F D VY++LE + L + ++ K +E A ++ + + Y H
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 159
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FN--RRRTMCGTLDYLPPEMVESVEH 190
VIHRD+K NL + ++KI DFG + F+ R++ +CGT +Y+ PE++ H
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGH 219
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQML 250
VDIWSLG + Y L G PPFE +TY RI + + P ++ A LI +ML
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH--INPVASALIRRML 277
Query: 251 VKDSSQRLPLHKLLEHPWIIQNADP 275
D + R + +LL + P
Sbjct: 278 HADPTLRPSVAELLTDEFFTSGYAP 302
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 135/261 (51%), Gaps = 18/261 (6%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALK-VLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
FD+ + LG G +G VY A K + IVA+K V +S LQ+ + +E+ I P
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQE------IIKEISIMQQCDSP 84
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQ-KCKYFSERRAATYVASLARALIYCHGK 135
++++ YG ++ +++++EY G + ++ + K +E AT + S + L Y H
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWS---VHTFNRRRTMCGTLDYLPPEMVESVEHDA 192
IHRDIK N+L+ +G K+ADFG + +R + GT ++ PE+++ + ++
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNC 204
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPP---KP-IVSSAAKDLISQ 248
DIWSLG+ E G PP+ A H R I + PP KP + S D + Q
Sbjct: 205 VADIWSLGITAIEMAEGKPPY-ADIHP--MRAIFMIPTNPPPTFRKPELWSDNFTDFVKQ 261
Query: 249 MLVKDSSQRLPLHKLLEHPWI 269
LVK QR +LL+HP++
Sbjct: 262 CLVKSPEQRATATQLLQHPFV 282
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 135/265 (50%), Gaps = 5/265 (1%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
T+ + G+ LG+G F Y + + + A KV+ KS L + + ++ E+ I L
Sbjct: 24 TMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL 83
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
+P+++ +G+F D VY++LE + L + ++ K +E A ++ + + Y H
Sbjct: 84 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 143
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHT-FN--RRRTMCGTLDYLPPEMVESVEH 190
VIHRD+K NL + ++KI DFG + F+ R++ +CGT +Y+ PE++ H
Sbjct: 144 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 203
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQML 250
VDIWSLG + Y L G PPFE +TY RI + + P ++ A LI +ML
Sbjct: 204 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH--INPVASALIRRML 261
Query: 251 VKDSSQRLPLHKLLEHPWIIQNADP 275
D + R + +LL + P
Sbjct: 262 HADPTLRPSVAELLTDEFFTSGYAP 286
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 134 bits (336), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 17/265 (6%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ D+D+ + LG G +G V LA + + VA+K++ + +++E+ I L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEIXINKMLN 62
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H N+++ YG+ + YL LEY + GEL+ ++ E A + L ++Y HG
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW-SVHTFNRR----RTMCGTLDYLPPEMVESVE 189
+ HRDIKPENLL+ + LKI+DFG +V +N R MCGTL Y+ PE+++ E
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 190 -HDANVDIWSLGVLCYEFLYGVPPFE-----AKEHSDTYRRIVQVDLKFPPKPIVSSAAK 243
H VD+WS G++ L G P++ +E+SD + ++ P + SA
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----PWKKIDSAPL 238
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPW 268
L+ ++LV++ S R+ + + + W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 133 bits (335), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 128/256 (50%), Gaps = 5/256 (1%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G F + + + + A K++ KS L + ++ E+ I L H +++ +G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+F D V+++LE + L + ++ K +E A Y+ + Y H VIHRD+K
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 142
Query: 144 PENLLIGAQGELKIADFGWSV---HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
NL + E+KI DFG + + R++ +CGT +Y+ PE++ H VD+WS+G
Sbjct: 143 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIG 202
Query: 201 VLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPL 260
+ Y L G PPFE +TY RI + + P ++ A LI +ML D + R +
Sbjct: 203 CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH--INPVAASLIQKMLQTDPTARPTI 260
Query: 261 HKLLEHPWIIQNADPS 276
++LL + P+
Sbjct: 261 NELLNDEFFTSGYIPA 276
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 133 bits (335), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 128/256 (50%), Gaps = 5/256 (1%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G F + + + + A K++ KS L + ++ E+ I L H +++ +G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+F D V+++LE + L + ++ K +E A Y+ + Y H VIHRD+K
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 166
Query: 144 PENLLIGAQGELKIADFGWSV---HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
NL + E+KI DFG + + R++ +CGT +Y+ PE++ H VD+WS+G
Sbjct: 167 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIG 226
Query: 201 VLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPL 260
+ Y L G PPFE +TY RI + + P ++ A LI +ML D + R +
Sbjct: 227 CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH--INPVAASLIQKMLQTDPTARPTI 284
Query: 261 HKLLEHPWIIQNADPS 276
++LL + P+
Sbjct: 285 NELLNDEFFTSGYIPA 300
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 140/265 (52%), Gaps = 17/265 (6%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ D+D+ + LG G +G V LA + + VA+K++ + +++E+ I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINAMLN 63
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H N+++ YG+ + YL LEY + GEL+ ++ E A + L ++Y HG
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW-SVHTFNRR----RTMCGTLDYLPPEMVESVE 189
+ HRDIKPENLL+ + LKI+DFG +V +N R MCGTL Y+ PE+++ E
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 190 -HDANVDIWSLGVLCYEFLYGVPPFE-----AKEHSDTYRRIVQVDLKFPPKPIVSSAAK 243
H VD+WS G++ L G P++ +E+SD + ++ P + SA
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----PWKKIDSAPL 239
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPW 268
L+ ++LV++ S R+ + + + W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRW 264
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 125/250 (50%), Gaps = 11/250 (4%)
Query: 12 RWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
R D+++ K +GRG FG V L R K + + A+K+L K ++ + E +I +
Sbjct: 65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 124
Query: 72 HLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIY 131
P +++L+ F D + +Y+++EY G+L + E+ A Y A + AL
Sbjct: 125 FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDA 183
Query: 132 CHGKHVIHRDIKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVES 187
H IHRD+KP+N+L+ G LK+ADFG + R T GT DY+ PE+++S
Sbjct: 184 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 243
Query: 188 VEHDA----NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV--QVDLKFPPKPIVSSA 241
D D WS+GV YE L G PF A TY +I+ + L FP +S
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKE 303
Query: 242 AKDLISQMLV 251
AK+LI L
Sbjct: 304 AKNLICAFLT 313
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 125/250 (50%), Gaps = 11/250 (4%)
Query: 12 RWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
R D+++ K +GRG FG V L R K + + A+K+L K ++ + E +I +
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 129
Query: 72 HLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIY 131
P +++L+ F D + +Y+++EY G+L + E+ A Y A + AL
Sbjct: 130 FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDA 188
Query: 132 CHGKHVIHRDIKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVES 187
H IHRD+KP+N+L+ G LK+ADFG + R T GT DY+ PE+++S
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 188 VEHDA----NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV--QVDLKFPPKPIVSSA 241
D D WS+GV YE L G PF A TY +I+ + L FP +S
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKE 308
Query: 242 AKDLISQMLV 251
AK+LI L
Sbjct: 309 AKNLICAFLT 318
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 125/250 (50%), Gaps = 11/250 (4%)
Query: 12 RWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
R D+++ K +GRG FG V L R K + + A+K+L K ++ + E +I +
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 129
Query: 72 HLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIY 131
P +++L+ F D + +Y+++EY G+L + E+ A Y A + AL
Sbjct: 130 FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDA 188
Query: 132 CHGKHVIHRDIKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVES 187
H IHRD+KP+N+L+ G LK+ADFG + R T GT DY+ PE+++S
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 188 VEHDA----NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV--QVDLKFPPKPIVSSA 241
D D WS+GV YE L G PF A TY +I+ + L FP +S
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKE 308
Query: 242 AKDLISQMLV 251
AK+LI L
Sbjct: 309 AKNLICAFLT 318
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 128/256 (50%), Gaps = 5/256 (1%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G F + + + + A K++ KS L + ++ E+ I L H +++ +G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+F D V+++LE + L + ++ K +E A Y+ + Y H VIHRD+K
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 168
Query: 144 PENLLIGAQGELKIADFGWSV---HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
NL + E+KI DFG + + R++ +CGT +Y+ PE++ H VD+WS+G
Sbjct: 169 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIG 228
Query: 201 VLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPL 260
+ Y L G PPFE +TY RI + + P ++ A LI +ML D + R +
Sbjct: 229 CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH--INPVAASLIQKMLQTDPTARPTI 286
Query: 261 HKLLEHPWIIQNADPS 276
++LL + P+
Sbjct: 287 NELLNDEFFTSGYIPA 302
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 139/261 (53%), Gaps = 18/261 (6%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G G G V LAREK S VA+K++ L++ Q L EV I +H N++ +Y
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMM---DLRKQQRRELLFNEVVIMRDYQHFNVVEMYK 109
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ + +++++E+ G L + + + +E + AT ++ +AL Y H + VIHRDIK
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIVSQVR-LNEEQIATVCEAVLQALAYLHAQGVIHRDIK 168
Query: 144 PENLLIGAQGELKIADFGWSVHT---FNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
+++L+ G +K++DFG+ +R+ + GT ++ PE++ + VDIWSLG
Sbjct: 169 SDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLG 228
Query: 201 VLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKP------IVSSAAKDLISQMLVKDS 254
++ E + G PP+ + +R L+ P P VS +D + +MLV+D
Sbjct: 229 IMVIEMVDGEPPYFSDSPVQAMKR-----LRDSPPPKLKNSHKVSPVLRDFLERMLVRDP 283
Query: 255 SQRLPLHKLLEHPWIIQNADP 275
+R +LL+HP+++Q P
Sbjct: 284 QERATAQELLDHPFLLQTGLP 304
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 17/265 (6%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ D+D+ + LG G +G V LA + + VA+K++ + +++E+ I L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLN 63
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H N+++ YG+ + YL LEY + GEL+ ++ E A + L ++Y HG
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW-SVHTFNRR----RTMCGTLDYLPPEMVESVE 189
+ HRDIKPENLL+ + LKI+DFG +V +N R MCGTL Y+ PE+++ E
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 190 -HDANVDIWSLGVLCYEFLYGVPPFE-----AKEHSDTYRRIVQVDLKFPPKPIVSSAAK 243
H VD+WS G++ L G P++ +E+SD + ++ P + SA
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----PWKKIDSAPL 239
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPW 268
L+ ++LV++ S R+ + + + W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRW 264
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 17/265 (6%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ D+D+ + LG G +G V LA + + VA+K++ + +++E+ I L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLN 62
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H N+++ YG+ + YL LEY + GEL+ ++ E A + L ++Y HG
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW-SVHTFNRR----RTMCGTLDYLPPEMVESVE 189
+ HRDIKPENLL+ + LKI+DFG +V +N R MCGTL Y+ PE+++ E
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 190 -HDANVDIWSLGVLCYEFLYGVPPFE-----AKEHSDTYRRIVQVDLKFPPKPIVSSAAK 243
H VD+WS G++ L G P++ +E+SD + ++ P + SA
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----PWKKIDSAPL 238
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPW 268
L+ ++LV++ S R+ + + + W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 17/265 (6%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ D+D+ + LG G +G V LA + + VA+K++ + +++E+ I L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLN 63
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H N+++ YG+ + YL LEY + GEL+ ++ E A + L ++Y HG
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW-SVHTFNRR----RTMCGTLDYLPPEMVESVE 189
+ HRDIKPENLL+ + LKI+DFG +V +N R MCGTL Y+ PE+++ E
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 190 -HDANVDIWSLGVLCYEFLYGVPPFE-----AKEHSDTYRRIVQVDLKFPPKPIVSSAAK 243
H VD+WS G++ L G P++ +E+SD + ++ P + SA
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----PWKKIDSAPL 239
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPW 268
L+ ++LV++ S R+ + + + W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRW 264
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 17/265 (6%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ D+D+ + LG G +G V LA + + VA+K++ + +++E+ I L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLN 63
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H N+++ YG+ + YL LEY + GEL+ ++ E A + L ++Y HG
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW-SVHTFNRR----RTMCGTLDYLPPEMVESVE 189
+ HRDIKPENLL+ + LKI+DFG +V +N R MCGTL Y+ PE+++ E
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 190 -HDANVDIWSLGVLCYEFLYGVPPFE-----AKEHSDTYRRIVQVDLKFPPKPIVSSAAK 243
H VD+WS G++ L G P++ +E+SD + ++ P + SA
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----PWKKIDSAPL 239
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPW 268
L+ ++LV++ S R+ + + + W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRW 264
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 17/265 (6%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ D+D+ + LG G +G V LA + + VA+K++ + +++E+ I L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLN 63
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H N+++ YG+ + YL LEY + GEL+ ++ E A + L ++Y HG
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW-SVHTFNRR----RTMCGTLDYLPPEMVESVE 189
+ HRDIKPENLL+ + LKI+DFG +V +N R MCGTL Y+ PE+++ E
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 190 -HDANVDIWSLGVLCYEFLYGVPPFE-----AKEHSDTYRRIVQVDLKFPPKPIVSSAAK 243
H VD+WS G++ L G P++ +E+SD + ++ P + SA
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----PWKKIDSAPL 239
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPW 268
L+ ++LV++ S R+ + + + W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRW 264
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 17/265 (6%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ D+D+ + LG G +G V LA + + VA+K++ + +++E+ I L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLN 63
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H N+++ YG+ + YL LEY + GEL+ ++ E A + L ++Y HG
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW-SVHTFNRR----RTMCGTLDYLPPEMVESVE 189
+ HRDIKPENLL+ + LKI+DFG +V +N R MCGTL Y+ PE+++ E
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 190 -HDANVDIWSLGVLCYEFLYGVPPFE-----AKEHSDTYRRIVQVDLKFPPKPIVSSAAK 243
H VD+WS G++ L G P++ +E+SD + ++ P + SA
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----PWKKIDSAPL 239
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPW 268
L+ ++LV++ S R+ + + + W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRW 264
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 17/265 (6%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ D+D+ + LG G +G V LA + + VA+K++ + +++E+ I L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLN 62
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H N+++ YG+ + YL LEY + GEL+ ++ E A + L ++Y HG
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW-SVHTFNRR----RTMCGTLDYLPPEMVESVE 189
+ HRDIKPENLL+ + LKI+DFG +V +N R MCGTL Y+ PE+++ E
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 190 -HDANVDIWSLGVLCYEFLYGVPPFE-----AKEHSDTYRRIVQVDLKFPPKPIVSSAAK 243
H VD+WS G++ L G P++ +E+SD + ++ P + SA
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----PWKKIDSAPL 238
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPW 268
L+ ++LV++ S R+ + + + W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 17/265 (6%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ D+D+ + LG G +G V LA + + VA+K++ + +++E+ I L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLN 62
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H N+++ YG+ + YL LEY + GEL+ ++ E A + L ++Y HG
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW-SVHTFNRR----RTMCGTLDYLPPEMVESVE 189
+ HRDIKPENLL+ + LKI+DFG +V +N R MCGTL Y+ PE+++ E
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 190 -HDANVDIWSLGVLCYEFLYGVPPFE-----AKEHSDTYRRIVQVDLKFPPKPIVSSAAK 243
H VD+WS G++ L G P++ +E+SD + ++ P + SA
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----PWKKIDSAPL 238
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPW 268
L+ ++LV++ S R+ + + + W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 17/265 (6%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ D+D+ + LG G +G V LA + + VA+K++ + +++E+ I L
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLN 61
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H N+++ YG+ + YL LEY + GEL+ ++ E A + L ++Y HG
Sbjct: 62 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 121
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW-SVHTFNRR----RTMCGTLDYLPPEMVESVE 189
+ HRDIKPENLL+ + LKI+DFG +V +N R MCGTL Y+ PE+++ E
Sbjct: 122 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 190 -HDANVDIWSLGVLCYEFLYGVPPFE-----AKEHSDTYRRIVQVDLKFPPKPIVSSAAK 243
H VD+WS G++ L G P++ +E+SD + ++ P + SA
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----PWKKIDSAPL 237
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPW 268
L+ ++LV++ S R+ + + + W
Sbjct: 238 ALLHKILVENPSARITIPDIKKDRW 262
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 17/265 (6%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ D+D+ + LG G +G V LA + + VA+K++ + +++E+ I L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLN 62
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H N+++ YG+ + YL LEY + GEL+ ++ E A + L ++Y HG
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW-SVHTFNRR----RTMCGTLDYLPPEMVESVE 189
+ HRDIKPENLL+ + LKI+DFG +V +N R MCGTL Y+ PE+++ E
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 190 -HDANVDIWSLGVLCYEFLYGVPPFE-----AKEHSDTYRRIVQVDLKFPPKPIVSSAAK 243
H VD+WS G++ L G P++ +E+SD + ++ P + SA
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----PWKKIDSAPL 238
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPW 268
L+ ++LV++ S R+ + + + W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 17/265 (6%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ D+D+ + LG G +G V LA + + VA+K++ + +++E+ I L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLN 63
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H N+++ YG+ + YL LEY + GEL+ ++ E A + L ++Y HG
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW-SVHTFNRR----RTMCGTLDYLPPEMVESVE 189
+ HRDIKPENLL+ + LKI+DFG +V +N R MCGTL Y+ PE+++ E
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 190 -HDANVDIWSLGVLCYEFLYGVPPFE-----AKEHSDTYRRIVQVDLKFPPKPIVSSAAK 243
H VD+WS G++ L G P++ +E+SD + ++ P + SA
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----PWKKIDSAPL 239
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPW 268
L+ ++LV++ S R+ + + + W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRW 264
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 17/265 (6%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ D+D+ + LG G +G V LA + + VA+K++ + +++E+ I L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLN 62
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H N+++ YG+ + YL LEY + GEL+ ++ E A + L ++Y HG
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW-SVHTFNRR----RTMCGTLDYLPPEMVESVE 189
+ HRDIKPENLL+ + LKI+DFG +V +N R MCGTL Y+ PE+++ E
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 190 -HDANVDIWSLGVLCYEFLYGVPPFE-----AKEHSDTYRRIVQVDLKFPPKPIVSSAAK 243
H VD+WS G++ L G P++ +E+SD + ++ P + SA
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----PWKKIDSAPL 238
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPW 268
L+ ++LV++ S R+ + + + W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 139/269 (51%), Gaps = 22/269 (8%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ-SHLR 74
+ +++ + +G G + K +N A+K++ KS+ ++ E+EI + +
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTE-------EIEILLRYGQ 74
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
HPNI+ L + D K VY++ E GEL ++ + K+FSER A+ + ++ + + Y H
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 135 KHVIHRDIKPENLLI----GAQGELKIADFGWSVHTFNRR---RTMCGTLDYLPPEMVES 187
+ V+HRD+KP N+L G ++I DFG++ T C T +++ PE++E
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLER 194
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV------QVDLKFPPKPIVSSA 241
+DA DIWSLGVL Y L G PF A DT I+ + L VS
Sbjct: 195 QGYDAACDIWSLGVLLYTXLTGYTPF-ANGPDDTPEEILARIGSGKFSLSGGYWNSVSDT 253
Query: 242 AKDLISQMLVKDSSQRLPLHKLLEHPWII 270
AKDL+S+ L D QRL +L HPWI+
Sbjct: 254 AKDLVSKXLHVDPHQRLTAALVLRHPWIV 282
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 17/265 (6%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ D+D+ + LG G +G V LA + + VA+K++ + +++E+ I L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLN 62
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H N+++ YG+ + YL LEY + GEL+ ++ E A + L ++Y HG
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW-SVHTFNRR----RTMCGTLDYLPPEMVESVE 189
+ HRDIKPENLL+ + LKI+DFG +V +N R MCGTL Y+ PE+++ E
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 190 -HDANVDIWSLGVLCYEFLYGVPPFE-----AKEHSDTYRRIVQVDLKFPPKPIVSSAAK 243
H VD+WS G++ L G P++ +E+SD + ++ P + SA
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----PWKKIDSAPL 238
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPW 268
L+ ++LV++ S R+ + + + W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 141/269 (52%), Gaps = 15/269 (5%)
Query: 6 SAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRR 65
S K L DFD+ + +GRG + V L R K+++ I A++V+ K + + ++
Sbjct: 42 SGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQT 101
Query: 66 EVEI-QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVAS 124
E + + HP ++ L+ F + R++ ++EY G+L +Q+ + E A Y A
Sbjct: 102 EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAE 161
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGW---SVHTFNRRRTMCGTLDYLP 181
++ AL Y H + +I+RD+K +N+L+ ++G +K+ D+G + + T CGT +Y+
Sbjct: 162 ISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIA 221
Query: 182 PEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDT---------YRRIVQVDLKF 232
PE++ ++ +VD W+LGVL +E + G PF+ SD ++ I++ ++
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 281
Query: 233 PPKPIVSSAAKDLISQMLVKDSSQRLPLH 261
P +S A ++ L KD +RL H
Sbjct: 282 PRS--LSVKAASVLKSFLNKDPKERLGCH 308
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 138/265 (52%), Gaps = 17/265 (6%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ D+D+ + LG G G V LA + + VA+K++ + +++E+ I L
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLN 62
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H N+++ YG+ + YL LEY + GEL+ ++ E A + L ++Y HG
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW-SVHTFNRR----RTMCGTLDYLPPEMVESVE 189
+ HRDIKPENLL+ + LKI+DFG +V +N R MCGTL Y+ PE+++ E
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 190 -HDANVDIWSLGVLCYEFLYGVPPFE-----AKEHSDTYRRIVQVDLKFPPKPIVSSAAK 243
H VD+WS G++ L G P++ +E+SD + ++ P + SA
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----PWKKIDSAPL 238
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPW 268
L+ ++LV++ S R+ + + + W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 140/287 (48%), Gaps = 34/287 (11%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQL-------------------- 54
LN + + +G+G +G V LA + N A+KVL K +L
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 55 ---QQSQVEHQLRREVEIQSHLRHPNILRLYGYFYD--QKRVYLILEYAAKGELYKELQK 109
Q Q+ +E+ I L HPN+++L D + +Y++ E +G + E+
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVM-EVPT 130
Query: 110 CKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNR 169
K SE +A Y L + + Y H + +IHRDIKP NLL+G G +KIADFG S + F
Sbjct: 131 LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVS-NEFKG 189
Query: 170 RRTM----CGTLDYLPPEMVESVE---HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTY 222
+ GT ++ PE + +D+W++GV Y F++G PF + +
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLH 249
Query: 223 RRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+I L+FP +P ++ KDLI++ML K+ R+ + ++ HPW+
Sbjct: 250 SKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 135/262 (51%), Gaps = 14/262 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G G G V +A EK + VA+K K L++ Q L EV I H N++ +Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVK---KMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYS 109
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ +++++E+ G L + + +E + AT S+ RAL Y H + VIHRDIK
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIATVCLSVLRALSYLHNQGVIHRDIK 168
Query: 144 PENLLIGAQGELKIADFGWSVHT---FNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
+++L+ + G +K++DFG+ +R+ + GT ++ PE++ + + VDIWSLG
Sbjct: 169 SDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLG 228
Query: 201 VLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKP----IVSSAAKDLISQMLVKDSSQ 256
++ E + G PP+ + RRI PP+ VSS + + MLV++ SQ
Sbjct: 229 IMVIEMIDGEPPYFNEPPLQAMRRIRD---SLPPRVKDLHKVSSVLRGFLDLMLVREPSQ 285
Query: 257 RLPLHKLLEHPWIIQNADPSGV 278
R +LL HP++ PS +
Sbjct: 286 RATAQELLGHPFLKLAGPPSCI 307
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 132/247 (53%), Gaps = 13/247 (5%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF+I K +GRG FG V + + K ++ + A+K+L K ++ + R E ++ +
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHGK 135
I L+ F D +YL+++Y G+L L K + E A Y+A + A+ H
Sbjct: 135 WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL 194
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWSVHTFN----RRRTMCGTLDYLPPEMVESVE-- 189
H +HRDIKP+N+L+ G +++ADFG + + GT DY+ PE+++++E
Sbjct: 195 HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGG 254
Query: 190 ---HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV--QVDLKFPPKPI-VSSAAK 243
+ D WSLGV YE LYG PF A+ +TY +I+ + +FP + VS AK
Sbjct: 255 KGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAK 314
Query: 244 DLISQML 250
DLI +++
Sbjct: 315 DLIRRLI 321
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 132/248 (53%), Gaps = 15/248 (6%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF+I K +GRG FG V + + K + I A+K+L K ++ + R E ++ +
Sbjct: 91 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 150
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHGK 135
I L+ F D+ +YL+++Y G+L L K + E A Y+ + A+ H
Sbjct: 151 WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQL 210
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM-----CGTLDYLPPEMVESVE- 189
H +HRDIKP+N+L+ G +++ADFG S N T+ GT DY+ PE+++++E
Sbjct: 211 HYVHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 269
Query: 190 ----HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVD--LKFPPKPI-VSSAA 242
+ D WSLGV YE LYG PF A+ +TY +I+ + +FP VS A
Sbjct: 270 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEA 329
Query: 243 KDLISQML 250
KDLI +++
Sbjct: 330 KDLIQRLI 337
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 132/248 (53%), Gaps = 15/248 (6%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
DF+I K +GRG FG V + + K + I A+K+L K ++ + R E ++ +
Sbjct: 75 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 134
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHGK 135
I L+ F D+ +YL+++Y G+L L K + E A Y+ + A+ H
Sbjct: 135 WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQL 194
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM-----CGTLDYLPPEMVESVE- 189
H +HRDIKP+N+L+ G +++ADFG S N T+ GT DY+ PE+++++E
Sbjct: 195 HYVHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 253
Query: 190 ----HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVD--LKFPPKPI-VSSAA 242
+ D WSLGV YE LYG PF A+ +TY +I+ + +FP VS A
Sbjct: 254 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEA 313
Query: 243 KDLISQML 250
KDLI +++
Sbjct: 314 KDLIQRLI 321
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 140/266 (52%), Gaps = 15/266 (5%)
Query: 6 SAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRR 65
S K L DFD+ + +GRG + V L R K+++ I A+KV+ K + + ++
Sbjct: 10 SGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQT 69
Query: 66 EVEI-QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVAS 124
E + + HP ++ L+ F + R++ ++EY G+L +Q+ + E A Y A
Sbjct: 70 EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAE 129
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGW---SVHTFNRRRTMCGTLDYLP 181
++ AL Y H + +I+RD+K +N+L+ ++G +K+ D+G + + CGT +Y+
Sbjct: 130 ISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 189
Query: 182 PEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDT---------YRRIVQVDLKF 232
PE++ ++ +VD W+LGVL +E + G PF+ SD ++ I++ ++
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 249
Query: 233 PPKPIVSSAAKDLISQMLVKDSSQRL 258
P V +A+ ++ L KD +RL
Sbjct: 250 PRSMSVKAAS--VLKSFLNKDPKERL 273
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 138/265 (52%), Gaps = 17/265 (6%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ D+D+ + LG G +G V LA + + VA+K++ + +++E+ I L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEIXINKMLN 63
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H N+++ YG+ + YL LEY + GEL+ ++ E A + L ++Y HG
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW-SVHTFNRR----RTMCGTLDYLPPEMVESVE 189
+ HRDIKPENLL+ + LKI+DFG +V +N R M GTL Y+ PE+++ E
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 190 -HDANVDIWSLGVLCYEFLYGVPPFE-----AKEHSDTYRRIVQVDLKFPPKPIVSSAAK 243
H VD+WS G++ L G P++ +E+SD + ++ P + SA
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----PWKKIDSAPL 239
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPW 268
L+ ++LV++ S R+ + + + W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRW 264
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 138/265 (52%), Gaps = 17/265 (6%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ D+D+ + LG G +G V LA + + VA+K++ + +++E+ I L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEIXINKMLN 62
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H N+++ YG+ + YL LEY + GEL+ ++ E A + L ++Y HG
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW-SVHTFNRR----RTMCGTLDYLPPEMVESVE 189
+ HRDIKPENLL+ + LKI+DFG +V +N R M GTL Y+ PE+++ E
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 190 -HDANVDIWSLGVLCYEFLYGVPPFE-----AKEHSDTYRRIVQVDLKFPPKPIVSSAAK 243
H VD+WS G++ L G P++ +E+SD + ++ P + SA
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----PWKKIDSAPL 238
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPW 268
L+ ++LV++ S R+ + + + W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 138/260 (53%), Gaps = 15/260 (5%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI-QSHL 73
L DFD+ + +GRG + V L R K+++ I A+KV+ K + + ++ E + +
Sbjct: 4 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
HP ++ L+ F + R++ ++EY G+L +Q+ + E A Y A ++ AL Y H
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGW---SVHTFNRRRTMCGTLDYLPPEMVESVEH 190
+ +I+RD+K +N+L+ ++G +K+ D+G + + CGT +Y+ PE++ ++
Sbjct: 124 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 183
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDT---------YRRIVQVDLKFPPKPIVSSA 241
+VD W+LGVL +E + G PF+ SD ++ I++ ++ P +S
Sbjct: 184 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS--LSVK 241
Query: 242 AKDLISQMLVKDSSQRLPLH 261
A ++ L KD +RL H
Sbjct: 242 AASVLKSFLNKDPKERLGCH 261
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 138/260 (53%), Gaps = 15/260 (5%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI-QSHL 73
L DFD+ + +GRG + V L R K+++ I A+KV+ K + + ++ E + +
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
HP ++ L+ F + R++ ++EY G+L +Q+ + E A Y A ++ AL Y H
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGW---SVHTFNRRRTMCGTLDYLPPEMVESVEH 190
+ +I+RD+K +N+L+ ++G +K+ D+G + + CGT +Y+ PE++ ++
Sbjct: 128 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 187
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDT---------YRRIVQVDLKFPPKPIVSSA 241
+VD W+LGVL +E + G PF+ SD ++ I++ ++ P +S
Sbjct: 188 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS--LSVK 245
Query: 242 AKDLISQMLVKDSSQRLPLH 261
A ++ L KD +RL H
Sbjct: 246 AASVLKSFLNKDPKERLGCH 265
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 138/265 (52%), Gaps = 17/265 (6%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ D+D+ + LG G +G V LA + + VA+K++ + +++E+ I L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLN 62
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H N+++ YG+ + YL LEY + GEL+ ++ E A + L ++Y HG
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW-SVHTFNRR----RTMCGTLDYLPPEMVESVE 189
+ HRDIKPENLL+ + LKI+DFG +V +N R M GTL Y+ PE+++ E
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 190 -HDANVDIWSLGVLCYEFLYGVPPFE-----AKEHSDTYRRIVQVDLKFPPKPIVSSAAK 243
H VD+WS G++ L G P++ +E+SD + ++ P + SA
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----PWKKIDSAPL 238
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPW 268
L+ ++LV++ S R+ + + + W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 138/265 (52%), Gaps = 17/265 (6%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ D+D+ + LG G +G V LA + + VA+K++ + +++E+ I L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLN 62
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H N+++ YG+ + YL LEY + GEL+ ++ E A + L ++Y HG
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW-SVHTFNRR----RTMCGTLDYLPPEMVESVE 189
+ HRDIKPENLL+ + LKI+DFG +V +N R M GTL Y+ PE+++ E
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 190 -HDANVDIWSLGVLCYEFLYGVPPFE-----AKEHSDTYRRIVQVDLKFPPKPIVSSAAK 243
H VD+WS G++ L G P++ +E+SD + ++ P + SA
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN----PWKKIDSAPL 238
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPW 268
L+ ++LV++ S R+ + + + W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 138/265 (52%), Gaps = 17/265 (6%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ D+D+ + LG G +G V LA + + VA+K++ + +++E+ I L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLN 62
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
H N+++ YG+ + YL LEY + GEL+ ++ E A + L ++Y HG
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW-SVHTFNRR----RTMCGTLDYLPPEMVESVE 189
+ HRDIKPENLL+ + LKI+DFG +V +N R M GTL Y+ PE+++ E
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 190 -HDANVDIWSLGVLCYEFLYGVPPFE-----AKEHSDTYRRIVQVDLKFPPKPIVSSAAK 243
H VD+WS G++ L G P++ +E+SD + ++ P + SA
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLN----PWKKIDSAPL 238
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPW 268
L+ ++LV++ S R+ + + + W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 127 bits (319), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 128/259 (49%), Gaps = 10/259 (3%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
+DI + LG G FG V+ EK + + K + ++ ++ E+ I + L HP
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFI---NTPYPLDKYTVKNEISIMNQLHHPK 109
Query: 78 ILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARALIYCHGKH 136
++ L+ F D+ + LILE+ + GEL+ + Y SE Y+ L + H
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS 169
Query: 137 VIHRDIKPENLLIGAQ--GELKIADFGWSVHTFNRR--RTMCGTLDYLPPEMVESVEHDA 192
++H DIKPEN++ + +KI DFG + + T ++ PE+V+
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGF 229
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAKDLISQML 250
D+W++GVL Y L G+ PF ++ +T + + + D +F VS AKD I +L
Sbjct: 230 YTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLL 289
Query: 251 VKDSSQRLPLHKLLEHPWI 269
K+ +RL +H LEHPW+
Sbjct: 290 QKEPRKRLTVHDALEHPWL 308
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 143/282 (50%), Gaps = 39/282 (13%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR-HPNILRLY 82
LG G V ++ A+K++ K Q + ++ REVE+ + H N+L L
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEK---QPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 83 GYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDI 142
+F ++ R YL+ E G + + K ++F+E A+ V +A AL + H K + HRD+
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 143 KPENLLIGAQGE---LKIADFG----------WSVHTFNRRRTMCGTLDYLPPEMVESVE 189
KPEN+L + +KI DFG S + T CG+ +Y+ PE+VE+
Sbjct: 138 KPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 190 HDANV-----DIWSLGVLCYEFLYGVPPFEAKEHSDT---------------YRRIVQVD 229
+A++ D+WSLGV+ Y L G PPF + SD + I +
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGK 257
Query: 230 LKFPPKPI--VSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+FP K +S AAKDLIS++LV+D+ QRL ++L+HPW+
Sbjct: 258 YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 135/257 (52%), Gaps = 15/257 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G+G FG V+ + R+ +VA+K++ + + + Q +E+ + S + + YG
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSSYVTKYYG 88
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ ++++I+EY G +L + F E + AT + + + L Y H + IHRDIK
Sbjct: 89 SYLKGSKLWIIMEYLGGGSAL-DLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIK 147
Query: 144 PENLLIGAQGELKIADFGWS---VHTFNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
N+L+ QG++K+ADFG + T +R T GT ++ PE+++ +D+ DIWSLG
Sbjct: 148 AANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLG 207
Query: 201 VLCYEFLYGVPPFEAKEHSDTY--RRIVQVDLKFPPKPI--VSSAAKDLISQMLVKDSSQ 256
+ E G PP +SD + R + + PP + + + K+ I L KD S
Sbjct: 208 ITAIELAKGEPP-----NSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDACLNKDPSF 262
Query: 257 RLPLHKLLEHPWIIQNA 273
R +LL+H +I++N+
Sbjct: 263 RPTAKELLKHKFIVKNS 279
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 135/268 (50%), Gaps = 16/268 (5%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFK-----SQLQQSQVEHQLRREVEIQSH 72
+D +GRG V + + H A+K++ S Q +V RRE I
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 73 LR-HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIY 131
+ HP+I+ L + ++L+ + KGEL+ L + SE+ + + SL A+ +
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSF 215
Query: 132 CHGKHVIHRDIKPENLLIGAQGELKIADFGWSVH--TFNRRRTMCGTLDYLPPEMVESVE 189
H +++HRD+KPEN+L+ +++++DFG+S H + R +CGT YL PE+++
Sbjct: 216 LHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSM 275
Query: 190 HDAN------VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF--PPKPIVSSA 241
+ + VD+W+ GV+ + L G PPF + R I++ +F P SS
Sbjct: 276 DETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSST 335
Query: 242 AKDLISQMLVKDSSQRLPLHKLLEHPWI 269
KDLIS++L D RL + L+HP+
Sbjct: 336 VKDLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 145/277 (52%), Gaps = 18/277 (6%)
Query: 10 KKRWTLNDFDIGKP-LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
KK +D+ + K LG G G V +R+ ALK+L+ S + +V+H +
Sbjct: 22 KKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHW--QAS 79
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLI-LEYAAKGELYKELQK--CKYFSERRAATYVASL 125
H+ IL +Y + KR LI +E GEL+ +Q+ + F+ER AA + +
Sbjct: 80 GGPHIV--CILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDI 137
Query: 126 ARALIYCHGKHVIHRDIKPENLLIGAQGE---LKIADFGWSVHTF-NRRRTMCGTLDYLP 181
A+ + H ++ HRD+KPENLL ++ + LK+ DFG++ T N +T C T Y+
Sbjct: 138 GTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVA 197
Query: 182 PEMVESVEHDANVDIWSLGVLCYEFLYGVPPF---EAKEHSDTYRRIVQVDLKFPPKP-- 236
PE++ ++D + D+WSLGV+ Y L G PPF + S +R +++ P P
Sbjct: 198 PEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEW 257
Query: 237 -IVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQN 272
VS AK LI +L D ++RL + + + HPWI Q+
Sbjct: 258 SEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 145/277 (52%), Gaps = 18/277 (6%)
Query: 10 KKRWTLNDFDIGKP-LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
KK +D+ + K LG G G V +R+ ALK+L+ S + +V+H +
Sbjct: 3 KKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHW--QAS 60
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLI-LEYAAKGELYKELQK--CKYFSERRAATYVASL 125
H+ IL +Y + KR LI +E GEL+ +Q+ + F+ER AA + +
Sbjct: 61 GGPHIV--CILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDI 118
Query: 126 ARALIYCHGKHVIHRDIKPENLLIGAQGE---LKIADFGWSVHTF-NRRRTMCGTLDYLP 181
A+ + H ++ HRD+KPENLL ++ + LK+ DFG++ T N +T C T Y+
Sbjct: 119 GTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVA 178
Query: 182 PEMVESVEHDANVDIWSLGVLCYEFLYGVPPF---EAKEHSDTYRRIVQVDLKFPPKP-- 236
PE++ ++D + D+WSLGV+ Y L G PPF + S +R +++ P P
Sbjct: 179 PEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEW 238
Query: 237 -IVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQN 272
VS AK LI +L D ++RL + + + HPWI Q+
Sbjct: 239 SEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 275
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 123 bits (309), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 145/285 (50%), Gaps = 31/285 (10%)
Query: 10 KKRWTLNDFDI-GKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
KK ++D+ + + LG G G V KR+ ALK+L Q + RREVE
Sbjct: 17 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVE 68
Query: 69 IQSHLRH---PNILRL---YGYFYDQKRVYLI-LEYAAKGELYKELQK--CKYFSERRAA 119
+ H R P+I+R+ Y Y ++ LI +E GEL+ +Q + F+ER A+
Sbjct: 69 L--HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 126
Query: 120 TYVASLARALIYCHGKHVIHRDIKPENLLIGAQ---GELKIADFGWSVHTF--NRRRTMC 174
+ S+ A+ Y H ++ HRD+KPENLL ++ LK+ DFG++ T N T C
Sbjct: 127 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 186
Query: 175 GTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKE------HSDTYRRIVQV 228
T Y+ PE++ ++D + D+WSLGV+ Y L G PPF + T R+ Q
Sbjct: 187 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 246
Query: 229 DLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
+ P VS K LI +L + +QR+ + + + HPWI+Q+
Sbjct: 247 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 291
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 123 bits (309), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 145/285 (50%), Gaps = 31/285 (10%)
Query: 10 KKRWTLNDFDI-GKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
KK ++D+ + + LG G G V KR+ ALK+L Q + RREVE
Sbjct: 25 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVE 76
Query: 69 IQSHLRH---PNILRL---YGYFYDQKRVYLI-LEYAAKGELYKELQK--CKYFSERRAA 119
+ H R P+I+R+ Y Y ++ LI +E GEL+ +Q + F+ER A+
Sbjct: 77 L--HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 134
Query: 120 TYVASLARALIYCHGKHVIHRDIKPENLLIGAQ---GELKIADFGWSVHTF--NRRRTMC 174
+ S+ A+ Y H ++ HRD+KPENLL ++ LK+ DFG++ T N T C
Sbjct: 135 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 194
Query: 175 GTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKE------HSDTYRRIVQV 228
T Y+ PE++ ++D + D+WSLGV+ Y L G PPF + T R+ Q
Sbjct: 195 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 254
Query: 229 DLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
+ P VS K LI +L + +QR+ + + + HPWI+Q+
Sbjct: 255 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 299
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 145/285 (50%), Gaps = 31/285 (10%)
Query: 10 KKRWTLNDFDI-GKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
KK ++D+ + + LG G G V KR+ ALK+L Q + RREVE
Sbjct: 16 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVE 67
Query: 69 IQSHLRH---PNILRL---YGYFYDQKRVYLI-LEYAAKGELYKELQK--CKYFSERRAA 119
+ H R P+I+R+ Y Y ++ LI +E GEL+ +Q + F+ER A+
Sbjct: 68 L--HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 125
Query: 120 TYVASLARALIYCHGKHVIHRDIKPENLLIGAQ---GELKIADFGWSVHTF--NRRRTMC 174
+ S+ A+ Y H ++ HRD+KPENLL ++ LK+ DFG++ T N T C
Sbjct: 126 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 185
Query: 175 GTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKE------HSDTYRRIVQV 228
T Y+ PE++ ++D + D+WSLGV+ Y L G PPF + T R+ Q
Sbjct: 186 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 245
Query: 229 DLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
+ P VS K LI +L + +QR+ + + + HPWI+Q+
Sbjct: 246 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 290
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 145/285 (50%), Gaps = 31/285 (10%)
Query: 10 KKRWTLNDFDI-GKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
KK ++D+ + + LG G G V KR+ ALK+L Q + RREVE
Sbjct: 61 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVE 112
Query: 69 IQSHLRH---PNILRL---YGYFYDQKRVYLI-LEYAAKGELYKELQK--CKYFSERRAA 119
+ H R P+I+R+ Y Y ++ LI +E GEL+ +Q + F+ER A+
Sbjct: 113 L--HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 170
Query: 120 TYVASLARALIYCHGKHVIHRDIKPENLLIGAQ---GELKIADFGWSVHTF--NRRRTMC 174
+ S+ A+ Y H ++ HRD+KPENLL ++ LK+ DFG++ T N T C
Sbjct: 171 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 230
Query: 175 GTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKE------HSDTYRRIVQV 228
T Y+ PE++ ++D + D+WSLGV+ Y L G PPF + T R+ Q
Sbjct: 231 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 290
Query: 229 DLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
+ P VS K LI +L + +QR+ + + + HPWI+Q+
Sbjct: 291 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 335
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 142/282 (50%), Gaps = 39/282 (13%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR-HPNILRLY 82
LG G V ++ A+K++ K Q + ++ REVE+ + H N+L L
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEK---QPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 83 GYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDI 142
+F ++ R YL+ E G + + K ++F+E A+ V +A AL + H K + HRD+
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 143 KPENLLIGAQGE---LKIADF----------GWSVHTFNRRRTMCGTLDYLPPEMVESVE 189
KPEN+L + +KI DF S + T CG+ +Y+ PE+VE+
Sbjct: 138 KPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 190 HDANV-----DIWSLGVLCYEFLYGVPPFEAKEHSDT---------------YRRIVQVD 229
+A++ D+WSLGV+ Y L G PPF + SD + I +
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGK 257
Query: 230 LKFPPKPI--VSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+FP K +S AAKDLIS++LV+D+ QRL ++L+HPW+
Sbjct: 258 YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 145/285 (50%), Gaps = 31/285 (10%)
Query: 10 KKRWTLNDFDI-GKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
KK ++D+ + + LG G G V KR+ ALK+L Q + RREVE
Sbjct: 11 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVE 62
Query: 69 IQSHLRH---PNILRL---YGYFYDQKRVYLI-LEYAAKGELYKELQK--CKYFSERRAA 119
+ H R P+I+R+ Y Y ++ LI +E GEL+ +Q + F+ER A+
Sbjct: 63 L--HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 120
Query: 120 TYVASLARALIYCHGKHVIHRDIKPENLLIGAQ---GELKIADFGWSVHTF--NRRRTMC 174
+ S+ A+ Y H ++ HRD+KPENLL ++ LK+ DFG++ T N T C
Sbjct: 121 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 180
Query: 175 GTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKE------HSDTYRRIVQV 228
T Y+ PE++ ++D + D+WSLGV+ Y L G PPF + T R+ Q
Sbjct: 181 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 240
Query: 229 DLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
+ P VS K LI +L + +QR+ + + + HPWI+Q+
Sbjct: 241 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 285
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 145/285 (50%), Gaps = 31/285 (10%)
Query: 10 KKRWTLNDFDI-GKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
KK ++D+ + + LG G G V KR+ ALK+L Q + RREVE
Sbjct: 15 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVE 66
Query: 69 IQSHLRH---PNILRL---YGYFYDQKRVYLI-LEYAAKGELYKELQK--CKYFSERRAA 119
+ H R P+I+R+ Y Y ++ LI +E GEL+ +Q + F+ER A+
Sbjct: 67 L--HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 124
Query: 120 TYVASLARALIYCHGKHVIHRDIKPENLLIGAQ---GELKIADFGWSVHTF--NRRRTMC 174
+ S+ A+ Y H ++ HRD+KPENLL ++ LK+ DFG++ T N T C
Sbjct: 125 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 184
Query: 175 GTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKE------HSDTYRRIVQV 228
T Y+ PE++ ++D + D+WSLGV+ Y L G PPF + T R+ Q
Sbjct: 185 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 244
Query: 229 DLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
+ P VS K LI +L + +QR+ + + + HPWI+Q+
Sbjct: 245 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 289
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 145/285 (50%), Gaps = 31/285 (10%)
Query: 10 KKRWTLNDFDI-GKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
KK ++D+ + + LG G G V KR+ ALK+L Q + RREVE
Sbjct: 55 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVE 106
Query: 69 IQSHLRH---PNILRL---YGYFYDQKRVYLI-LEYAAKGELYKELQK--CKYFSERRAA 119
+ H R P+I+R+ Y Y ++ LI +E GEL+ +Q + F+ER A+
Sbjct: 107 L--HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 164
Query: 120 TYVASLARALIYCHGKHVIHRDIKPENLLIGAQ---GELKIADFGWSVHTF--NRRRTMC 174
+ S+ A+ Y H ++ HRD+KPENLL ++ LK+ DFG++ T N T C
Sbjct: 165 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 224
Query: 175 GTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKE------HSDTYRRIVQV 228
T Y+ PE++ ++D + D+WSLGV+ Y L G PPF + T R+ Q
Sbjct: 225 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 284
Query: 229 DLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
+ P VS K LI +L + +QR+ + + + HPWI+Q+
Sbjct: 285 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 329
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 145/285 (50%), Gaps = 31/285 (10%)
Query: 10 KKRWTLNDFDI-GKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
KK ++D+ + + LG G G V KR+ ALK+L Q + RREVE
Sbjct: 10 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVE 61
Query: 69 IQSHLRH---PNILRL---YGYFYDQKRVYLI-LEYAAKGELYKELQK--CKYFSERRAA 119
+ H R P+I+R+ Y Y ++ LI +E GEL+ +Q + F+ER A+
Sbjct: 62 L--HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 119
Query: 120 TYVASLARALIYCHGKHVIHRDIKPENLLIGAQ---GELKIADFGWSVHTF--NRRRTMC 174
+ S+ A+ Y H ++ HRD+KPENLL ++ LK+ DFG++ T N T C
Sbjct: 120 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 179
Query: 175 GTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKE------HSDTYRRIVQV 228
T Y+ PE++ ++D + D+WSLGV+ Y L G PPF + T R+ Q
Sbjct: 180 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 239
Query: 229 DLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
+ P VS K LI +L + +QR+ + + + HPWI+Q+
Sbjct: 240 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 284
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 145/285 (50%), Gaps = 31/285 (10%)
Query: 10 KKRWTLNDFDI-GKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
KK ++D+ + + LG G G V KR+ ALK+L Q + RREVE
Sbjct: 9 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVE 60
Query: 69 IQSHLRH---PNILRL---YGYFYDQKRVYLI-LEYAAKGELYKELQK--CKYFSERRAA 119
+ H R P+I+R+ Y Y ++ LI +E GEL+ +Q + F+ER A+
Sbjct: 61 L--HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 118
Query: 120 TYVASLARALIYCHGKHVIHRDIKPENLLIGAQ---GELKIADFGWSVHTF--NRRRTMC 174
+ S+ A+ Y H ++ HRD+KPENLL ++ LK+ DFG++ T N T C
Sbjct: 119 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 178
Query: 175 GTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKE------HSDTYRRIVQV 228
T Y+ PE++ ++D + D+WSLGV+ Y L G PPF + T R+ Q
Sbjct: 179 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 238
Query: 229 DLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
+ P VS K LI +L + +QR+ + + + HPWI+Q+
Sbjct: 239 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 283
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 136/262 (51%), Gaps = 14/262 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G G G V +A + S +VA+K K L++ Q L EV I +H N++ +Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 88
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ +++++E+ G L + + E+ AA +A L +AL H + VIHRDIK
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL-QALSVLHAQGVIHRDIK 147
Query: 144 PENLLIGAQGELKIADFGWSVHT---FNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
+++L+ G +K++DFG+ RR+ + GT ++ PE++ + + VDIWSLG
Sbjct: 148 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 207
Query: 201 VLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKP----IVSSAAKDLISQMLVKDSSQ 256
++ E + G PP+ + + I PP+ VS + K + ++LV+D +Q
Sbjct: 208 IMVIEMVDGEPPYFNEPPLKAMKMIRD---NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 264
Query: 257 RLPLHKLLEHPWIIQNADPSGV 278
R +LL+HP++ + P+ +
Sbjct: 265 RATAAELLKHPFLAKAGPPASI 286
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 145/285 (50%), Gaps = 31/285 (10%)
Query: 10 KKRWTLNDFDI-GKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
KK ++D+ + + LG G G V KR+ ALK+L Q + RREVE
Sbjct: 11 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVE 62
Query: 69 IQSHLRH---PNILRL---YGYFYDQKRVYLI-LEYAAKGELYKELQK--CKYFSERRAA 119
+ H R P+I+R+ Y Y ++ LI +E GEL+ +Q + F+ER A+
Sbjct: 63 L--HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 120
Query: 120 TYVASLARALIYCHGKHVIHRDIKPENLLIGAQ---GELKIADFGWSVHTF--NRRRTMC 174
+ S+ A+ Y H ++ HRD+KPENLL ++ LK+ DFG++ T N T C
Sbjct: 121 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 180
Query: 175 GTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKE------HSDTYRRIVQV 228
T Y+ PE++ ++D + D+WSLGV+ Y L G PPF + T R+ Q
Sbjct: 181 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 240
Query: 229 DLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
+ P VS K LI +L + +QR+ + + + HPWI+Q+
Sbjct: 241 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 285
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 136/262 (51%), Gaps = 14/262 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G G G V +A + S +VA+K K L++ Q L EV I +H N++ +Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 84
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ +++++E+ G L + + E+ AA +A L +AL H + VIHRDIK
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL-QALSVLHAQGVIHRDIK 143
Query: 144 PENLLIGAQGELKIADFGWSVHT---FNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
+++L+ G +K++DFG+ RR+ + GT ++ PE++ + + VDIWSLG
Sbjct: 144 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 203
Query: 201 VLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKP----IVSSAAKDLISQMLVKDSSQ 256
++ E + G PP+ + + I PP+ VS + K + ++LV+D +Q
Sbjct: 204 IMVIEMVDGEPPYFNEPPLKAMKMIRD---NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 260
Query: 257 RLPLHKLLEHPWIIQNADPSGV 278
R +LL+HP++ + P+ +
Sbjct: 261 RATAAELLKHPFLAKAGPPASI 282
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 136/262 (51%), Gaps = 14/262 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G G G V +A + S +VA+K K L++ Q L EV I +H N++ +Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 95
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ +++++E+ G L + + E+ AA +A L +AL H + VIHRDIK
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL-QALSVLHAQGVIHRDIK 154
Query: 144 PENLLIGAQGELKIADFGWSVHT---FNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
+++L+ G +K++DFG+ RR+ + GT ++ PE++ + + VDIWSLG
Sbjct: 155 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 214
Query: 201 VLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKP----IVSSAAKDLISQMLVKDSSQ 256
++ E + G PP+ + + I PP+ VS + K + ++LV+D +Q
Sbjct: 215 IMVIEMVDGEPPYFNEPPLKAMKMIRD---NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 271
Query: 257 RLPLHKLLEHPWIIQNADPSGV 278
R +LL+HP++ + P+ +
Sbjct: 272 RATAAELLKHPFLAKAGPPASI 293
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 136/262 (51%), Gaps = 14/262 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G G G V +A + S +VA+K K L++ Q L EV I +H N++ +Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 93
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ +++++E+ G L + + E+ AA +A L +AL H + VIHRDIK
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL-QALSVLHAQGVIHRDIK 152
Query: 144 PENLLIGAQGELKIADFGWSVHT---FNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
+++L+ G +K++DFG+ RR+ + GT ++ PE++ + + VDIWSLG
Sbjct: 153 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 212
Query: 201 VLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKP----IVSSAAKDLISQMLVKDSSQ 256
++ E + G PP+ + + I PP+ VS + K + ++LV+D +Q
Sbjct: 213 IMVIEMVDGEPPYFNEPPLKAMKMIRD---NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 269
Query: 257 RLPLHKLLEHPWIIQNADPSGV 278
R +LL+HP++ + P+ +
Sbjct: 270 RATAAELLKHPFLAKAGPPASI 291
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 130/270 (48%), Gaps = 16/270 (5%)
Query: 14 TLND-FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSH 72
T++D F + LG G FG V+L E+ S +K + K + Q Q+ E+E+
Sbjct: 19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPM--EQIEAEIEVLKS 76
Query: 73 LRHPNILRLYGYFYDQKRVYLILEYAAKGELYKEL----QKCKYFSERRAATYVASLARA 128
L HPNI++++ F D +Y+++E GEL + + + K SE A + + A
Sbjct: 77 LDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA 136
Query: 129 LIYCHGKHVIHRDIKPENLLI---GAQGELKIADFGWS--VHTFNRRRTMCGTLDYLPPE 183
L Y H +HV+H+D+KPEN+L +KI DFG + + GT Y+ PE
Sbjct: 137 LAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPE 196
Query: 184 MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV--QVDLKFPPKPIVSSA 241
+ + + DIWS GV+ Y L G PF + ++ + + +P+ A
Sbjct: 197 VFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQA 255
Query: 242 AKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
DL+ QML KD +R ++L H W Q
Sbjct: 256 V-DLLKQMLTKDPERRPSAAQVLHHEWFKQ 284
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 136/262 (51%), Gaps = 14/262 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G G G V +A + S +VA+K K L++ Q L EV I +H N++ +Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 138
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ +++++E+ G L + + E+ AA +A L +AL H + VIHRDIK
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL-QALSVLHAQGVIHRDIK 197
Query: 144 PENLLIGAQGELKIADFGWSVHT---FNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
+++L+ G +K++DFG+ RR+ + GT ++ PE++ + + VDIWSLG
Sbjct: 198 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 257
Query: 201 VLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKP----IVSSAAKDLISQMLVKDSSQ 256
++ E + G PP+ + + I PP+ VS + K + ++LV+D +Q
Sbjct: 258 IMVIEMVDGEPPYFNEPPLKAMKMIRD---NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 314
Query: 257 RLPLHKLLEHPWIIQNADPSGV 278
R +LL+HP++ + P+ +
Sbjct: 315 RATAAELLKHPFLAKAGPPASI 336
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 137/262 (52%), Gaps = 14/262 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G G G V +A + S +VA+K K L++ Q L EV I +H N++ +Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 215
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ +++++E+ G L + + E+ AA +A L +AL H + VIHRDIK
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL-QALSVLHAQGVIHRDIK 274
Query: 144 PENLLIGAQGELKIADFGWSVHT---FNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
+++L+ G +K++DFG+ RR+ + GT ++ PE++ + + VDIWSLG
Sbjct: 275 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 334
Query: 201 VLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKP----IVSSAAKDLISQMLVKDSSQ 256
++ E + G PP+ + + + + PP+ VS + K + ++LV+D +Q
Sbjct: 335 IMVIEMVDGEPPY---FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 391
Query: 257 RLPLHKLLEHPWIIQNADPSGV 278
R +LL+HP++ + P+ +
Sbjct: 392 RATAAELLKHPFLAKAGPPASI 413
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 132/253 (52%), Gaps = 10/253 (3%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG G+FG V+ E + +A K++ ++ + +++ E+ + + L H N+++LY
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKE---EVKNEISVMNQLDHANLIQLYD 153
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARALIYCHGKHVIHRDI 142
F + + L++EY GEL+ + Y +E ++ + + + H +++H D+
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDL 213
Query: 143 KPENLLIGAQG--ELKIADFGWSVHTFNRRRTMC--GTLDYLPPEMVESVEHDANVDIWS 198
KPEN+L + ++KI DFG + R + GT ++L PE+V D+WS
Sbjct: 214 KPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWS 273
Query: 199 LGVLCYEFLYGVPPFEAKEHSDTYRRIVQV--DLKFPPKPIVSSAAKDLISQMLVKDSSQ 256
+GV+ Y L G+ PF ++T I+ DL+ +S AK+ IS++L+K+ S
Sbjct: 274 VGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSW 333
Query: 257 RLPLHKLLEHPWI 269
R+ + L+HPW+
Sbjct: 334 RISASEALKHPWL 346
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 120 bits (302), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 144/285 (50%), Gaps = 31/285 (10%)
Query: 10 KKRWTLNDFDI-GKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
KK ++D+ + + LG G G V KR+ ALK+L Q + RREVE
Sbjct: 9 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVE 60
Query: 69 IQSHLRH---PNILRL---YGYFYDQKRVYLI-LEYAAKGELYKELQK--CKYFSERRAA 119
+ H R P+I+R+ Y Y ++ LI +E GEL+ +Q + F+ER A+
Sbjct: 61 L--HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 118
Query: 120 TYVASLARALIYCHGKHVIHRDIKPENLLIGAQ---GELKIADFGWSVHTF--NRRRTMC 174
+ S+ A+ Y H ++ HRD+KPENLL ++ LK+ DFG++ T N C
Sbjct: 119 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPC 178
Query: 175 GTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKE------HSDTYRRIVQV 228
T Y+ PE++ ++D + D+WSLGV+ Y L G PPF + T R+ Q
Sbjct: 179 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 238
Query: 229 DLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
+ P VS K LI +L + +QR+ + + + HPWI+Q+
Sbjct: 239 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 283
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 120 bits (301), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 137/266 (51%), Gaps = 15/266 (5%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ--VEHQLRREVEIQSHLRH 75
+++ + +G+G F V + + A+K++ ++ S L+RE I L+H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 76 PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK----YFSERRAATYVASLARALIY 131
P+I+ L + +Y++ E+ +L E+ K +SE A+ Y+ + AL Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 132 CHGKHVIHRDIKPENLLIGAQ---GELKIADFGWSVHTFNRRRTM---CGTLDYLPPEMV 185
CH ++IHRD+KPEN+L+ ++ +K+ DFG ++ GT ++ PE+V
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 186 ESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAK 243
+ + VD+W GV+ + L G PF + + I++ K P+ +S +AK
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQWSHISESAK 264
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPWI 269
DL+ +ML+ D ++R+ +++ L HPW+
Sbjct: 265 DLVRRMLMLDPAERITVYEALNHPWL 290
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 132/257 (51%), Gaps = 15/257 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G+G FG V+ + R+ +VA+K++ + + + Q +E+ + S P + + YG
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYVTKYYG 92
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ ++++I+EY G L+ E + AT + + + L Y H + IHRDIK
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKKIHRDIK 151
Query: 144 PENLLIGAQGELKIADFGWS---VHTFNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
N+L+ GE+K+ADFG + T +R T GT ++ PE+++ +D+ DIWSLG
Sbjct: 152 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLG 211
Query: 201 VLCYEFLYGVPPFEAKEHSDTY--RRIVQVDLKFPP--KPIVSSAAKDLISQMLVKDSSQ 256
+ E G PP HS+ + + + + PP + S K+ + L K+ S
Sbjct: 212 ITAIELARGEPP-----HSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSF 266
Query: 257 RLPLHKLLEHPWIIQNA 273
R +LL+H +I++NA
Sbjct: 267 RPTAKELLKHKFILRNA 283
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 132/257 (51%), Gaps = 15/257 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G+G FG V+ + R+ +VA+K++ + + + Q +E+ + S P + + YG
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYVTKYYG 72
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ ++++I+EY G L+ E + AT + + + L Y H + IHRDIK
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 144 PENLLIGAQGELKIADFGWS---VHTFNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
N+L+ GE+K+ADFG + T +R T GT ++ PE+++ +D+ DIWSLG
Sbjct: 132 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLG 191
Query: 201 VLCYEFLYGVPPFEAKEHSDTY--RRIVQVDLKFPP--KPIVSSAAKDLISQMLVKDSSQ 256
+ E G PP HS+ + + + + PP + S K+ + L K+ S
Sbjct: 192 ITAIELARGEPP-----HSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSF 246
Query: 257 RLPLHKLLEHPWIIQNA 273
R +LL+H +I++NA
Sbjct: 247 RPTAKELLKHKFILRNA 263
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 137/268 (51%), Gaps = 18/268 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQ-QSQVEHQLRREVEIQSHLR 74
+DF+ LG G G V+ K S ++A K++ L+ + + +Q+ RE+++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI---HLEIKPAIRNQIIRELQVLHECN 62
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
P I+ YG FY + + +E+ G L + L+K E+ ++ + L Y
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 135 KH-VIHRDIKPENLLIGAQGELKIADFGWSVHTFNRR-RTMCGTLDYLPPEMVESVEHDA 192
KH ++HRD+KP N+L+ ++GE+K+ DFG S + + GT Y+ PE ++ +
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 182
Query: 193 NVDIWSLGVLCYEFLYG---VPPFEAKEHSDTYRRIVQVDLKF-----PPK---PIVSSA 241
DIWS+G+ E G +PP +AKE S I ++ L + PPK + S
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFEL-LDYIVNEPPPKLPSGVFSLE 241
Query: 242 AKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+D +++ L+K+ ++R L +L+ H +I
Sbjct: 242 FQDFVNKCLIKNPAERADLKQLMVHAFI 269
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 128/270 (47%), Gaps = 13/270 (4%)
Query: 14 TLNDFDI--GKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
N+F I K LGRGKF V K + A K L K + Q L ++
Sbjct: 25 NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLEL 84
Query: 72 HLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARAL 129
P ++ L+ + + + LILEYAA GE++ + + SE + + +
Sbjct: 85 AKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGV 144
Query: 130 IYCHGKHVIHRDIKPENLLIGA---QGELKIADFGWS---VHTFNRRRTMCGTLDYLPPE 183
Y H +++H D+KP+N+L+ + G++KI DFG S H R M GT +YL PE
Sbjct: 145 YYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIM-GTPEYLAPE 203
Query: 184 MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSA 241
++ D+W++G++ Y L PF +++ +TY I QV++ + + VS
Sbjct: 204 ILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQL 263
Query: 242 AKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
A D I +LVK+ +R L H W+ Q
Sbjct: 264 ATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 140/306 (45%), Gaps = 55/306 (17%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVE--HQLRREVEIQSHLRHPNILRL 81
+G+G +G V +A E ++ I A+K++ K++++Q + +++ EV + L HPNI RL
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 82 YGYFYDQKRVYLILEYAAKGELYKELQ--------KCKY--------------------- 112
Y + D++ + L++E G L +L KC
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 113 ---------FSERRA--ATYVASLARALIYCHGKHVIHRDIKPENLLIGAQG--ELKIAD 159
F +R + + + AL Y H + + HRDIKPEN L E+K+ D
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVD 213
Query: 160 FGWSVHTFNRRR-------TMCGTLDYLPPEMVESVE--HDANVDIWSLGVLCYEFLYGV 210
FG S + T GT ++ PE++ + + D WS GVL + L G
Sbjct: 214 FGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGA 273
Query: 211 PPFEAKEHSDTYRRIVQVDLKF--PPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPW 268
PF +DT +++ L F P ++S A+DL+S +L ++ +R + L+HPW
Sbjct: 274 VPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPW 333
Query: 269 IIQNAD 274
I Q +D
Sbjct: 334 ISQFSD 339
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 131/257 (50%), Gaps = 15/257 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G+G FG V+ + R+ +VA+K++ + + + Q +E+ + S P + + YG
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYVTKYYG 72
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ ++++I+EY G L+ E + AT + + + L Y H + IHRDIK
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 144 PENLLIGAQGELKIADFGWS---VHTFNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
N+L+ GE+K+ADFG + T +R GT ++ PE+++ +D+ DIWSLG
Sbjct: 132 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLG 191
Query: 201 VLCYEFLYGVPPFEAKEHSDTY--RRIVQVDLKFPP--KPIVSSAAKDLISQMLVKDSSQ 256
+ E G PP HS+ + + + + PP + S K+ + L K+ S
Sbjct: 192 ITAIELARGEPP-----HSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSF 246
Query: 257 RLPLHKLLEHPWIIQNA 273
R +LL+H +I++NA
Sbjct: 247 RPTAKELLKHKFILRNA 263
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 131/257 (50%), Gaps = 15/257 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G+G FG V+ + R+ +VA+K++ + + + Q +E+ + S P + + YG
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYVTKYYG 87
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ ++++I+EY G L+ E + AT + + + L Y H + IHRDIK
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSEKKIHRDIK 146
Query: 144 PENLLIGAQGELKIADFGWS---VHTFNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
N+L+ GE+K+ADFG + T +R GT ++ PE+++ +D+ DIWSLG
Sbjct: 147 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLG 206
Query: 201 VLCYEFLYGVPPFEAKEHSDTY--RRIVQVDLKFPP--KPIVSSAAKDLISQMLVKDSSQ 256
+ E G PP HS+ + + + + PP + S K+ + L K+ S
Sbjct: 207 ITAIELARGEPP-----HSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSF 261
Query: 257 RLPLHKLLEHPWIIQNA 273
R +LL+H +I++NA
Sbjct: 262 RPTAKELLKHKFILRNA 278
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 9/252 (3%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G G FG L + +K + S++ + E RREV + ++++HPNI++
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREES-RREVAVLANMKHPNIVQYRE 90
Query: 84 YFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
F + +Y++++Y G+L+K + QK F E + + + AL + H + ++HRD
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRD 150
Query: 142 IKPENLLIGAQGELKIADFGWS---VHTFNRRRTMCGTLDYLPPEMVESVEHDANVDIWS 198
IK +N+ + G +++ DFG + T R GT YL PE+ E+ ++ DIW+
Sbjct: 151 IKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWA 210
Query: 199 LGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI-VSSAAKDLISQMLVKDSSQR 257
LG + YE FEA + +I+ FPP + S + L+SQ+ ++ R
Sbjct: 211 LGCVLYELCTLKHAFEAGSMKNLVLKIISGS--FPPVSLHYSYDLRSLVSQLFKRNPRDR 268
Query: 258 LPLHKLLEHPWI 269
++ +LE +I
Sbjct: 269 PSVNSILEKGFI 280
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 138/285 (48%), Gaps = 31/285 (10%)
Query: 10 KKRWTLNDFDI-GKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
KK ++D+ + + LG G G V KR+ ALK L Q + RREVE
Sbjct: 55 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXL--------QDCPKARREVE 106
Query: 69 IQSHLRH---PNILRL---YGYFYDQKRVYLIL-EYAAKGELYKELQK--CKYFSERRAA 119
+ H R P+I+R+ Y Y ++ LI+ E GEL+ +Q + F+ER A+
Sbjct: 107 L--HWRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREAS 164
Query: 120 TYVASLARALIYCHGKHVIHRDIKPENLLIGAQ---GELKIADFGWSVHTF--NRRRTMC 174
S+ A+ Y H ++ HRD+KPENLL ++ LK+ DFG++ T N T C
Sbjct: 165 EIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 224
Query: 175 GTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKE------HSDTYRRIVQV 228
T Y+ PE++ ++D + D WSLGV+ Y L G PPF + T R Q
Sbjct: 225 YTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQY 284
Query: 229 DLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
+ P VS K LI +L + +QR + + HPWI Q+
Sbjct: 285 EFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQST 329
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 19/266 (7%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVL-------FKSQLQQSQVEHQLRREVEIQSHLR-H 75
LGRG V K + A+K++ F ++ Q E L+ EV+I + H
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK-EVDILRKVSGH 83
Query: 76 PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
PNI++L + +L+ + KGEL+ L + SE+ + +L + H
Sbjct: 84 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 143
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+++HRD+KPEN+L+ +K+ DFG+S + + R++CGT YL PE++E +D +
Sbjct: 144 NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNH 203
Query: 194 ------VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF--PPKPIVSSAAKDL 245
VD+WS GV+ Y L G PPF ++ R I+ + +F P S KDL
Sbjct: 204 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDL 263
Query: 246 ISQMLVKDSSQRLPLHKLLEHPWIIQ 271
+S+ LV +R + L HP+ Q
Sbjct: 264 VSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 130/266 (48%), Gaps = 19/266 (7%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVL-------FKSQLQQSQVEHQLRREVEIQSHLR-H 75
LGRG V K + A+K++ F ++ Q E L+ EV+I + H
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK-EVDILRKVSGH 70
Query: 76 PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
PNI++L + +L+ + KGEL+ L + SE+ + +L + H
Sbjct: 71 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 130
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+++HRD+KPEN+L+ +K+ DFG+S + + R +CGT YL PE++E +D +
Sbjct: 131 NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNH 190
Query: 194 ------VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF--PPKPIVSSAAKDL 245
VD+WS GV+ Y L G PPF ++ R I+ + +F P S KDL
Sbjct: 191 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDL 250
Query: 246 ISQMLVKDSSQRLPLHKLLEHPWIIQ 271
+S+ LV +R + L HP+ Q
Sbjct: 251 VSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 125/253 (49%), Gaps = 21/253 (8%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+DF+I K +GRG F V + + K++ + A+K++ K + + R E ++ +
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 76 PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT----YVASLARALIY 131
I +L+ F D+ +YL++EY G+L L K F ER A Y+A + A+
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSK---FGERIPAEMARFYLAEIVMAIDS 177
Query: 132 CHGKHVIHRDIKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVES 187
H +HRDIKP+N+L+ G +++ADFG + R GT DYL PE++++
Sbjct: 178 VHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQA 237
Query: 188 VEHDA-------NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVD--LKFP-PKPI 237
V D W+LGV YE YG PF A ++TY +IV L P
Sbjct: 238 VGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEG 297
Query: 238 VSSAAKDLISQML 250
V A+D I ++L
Sbjct: 298 VPEEARDFIQRLL 310
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 112/218 (51%), Gaps = 5/218 (2%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
E + + F+I + +G+G FG V + ++ + + A+K + K + + + +E++
Sbjct: 8 ENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQ 67
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
I L HP ++ L+ F D++ ++++++ G+L LQ+ +F E ++ L A
Sbjct: 68 IMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMA 127
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRR--TMCGTLDYLPPEMVE 186
L Y + +IHRD+KP+N+L+ G + I DF + + TM GT Y+ PEM
Sbjct: 128 LDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFS 187
Query: 187 S---VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDT 221
S + VD WSLGV YE L G P+ + + +
Sbjct: 188 SRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS 225
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 129/269 (47%), Gaps = 16/269 (5%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
D+++ +G G +G R K I+ K L + +++ + L EV + L+HP
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAE-KQMLVSEVNLLRELKHP 65
Query: 77 NILRLYGYFYDQKR--VYLILEYAAKGELYKELQKC----KYFSERRAATYVASLARALI 130
NI+R Y D+ +Y+++EY G+L + K +Y E + L AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 131 YCH-----GKHVIHRDIKPENLLIGAQGELKIADFGWS---VHTFNRRRTMCGTLDYLPP 182
CH G V+HRD+KP N+ + + +K+ DFG + H + +T GT Y+ P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSP 185
Query: 183 EMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAA 242
E + + ++ DIWSLG L YE +PPF A + +I + + P S
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYR-YSDEL 244
Query: 243 KDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
++I++ML R + ++LE+P I++
Sbjct: 245 NEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 123/256 (48%), Gaps = 15/256 (5%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
TL +F I K +GRG+F VY A VALK + L ++ +E+++ L
Sbjct: 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL 89
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK----YFSERRAATYVASLARAL 129
HPN+++ Y F + + ++LE A G+L + ++ K ER Y L AL
Sbjct: 90 NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT----MCGTLDYLPPEMV 185
+ H + V+HRDIKP N+ I A G +K+ D G F+ + T + GT Y+ PE +
Sbjct: 150 EHMHSRRVMHRDIKPANVFITATGVVKLGDLGLG-RFFSSKTTAAHSLVGTPYYMSPERI 208
Query: 186 ESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHS--DTYRRIVQVDLKFPPKPI--VSSA 241
++ DIWSLG L YE PF + + ++I Q D +PP P S
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--YPPLPSDHYSEE 266
Query: 242 AKDLISQMLVKDSSQR 257
+ L++ + D +R
Sbjct: 267 LRQLVNMCINPDPEKR 282
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 130/266 (48%), Gaps = 19/266 (7%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVL-------FKSQLQQSQVEHQLRREVEIQSHLR-H 75
LGRG V K + A+K++ F ++ Q E L+ EV+I + H
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK-EVDILRKVSGH 83
Query: 76 PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
PNI++L + +L+ + KGEL+ L + SE+ + +L + H
Sbjct: 84 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 143
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+++HRD+KPEN+L+ +K+ DFG+S + + R +CGT YL PE++E +D +
Sbjct: 144 NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNH 203
Query: 194 ------VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF--PPKPIVSSAAKDL 245
VD+WS GV+ Y L G PPF ++ R I+ + +F P S KDL
Sbjct: 204 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDL 263
Query: 246 ISQMLVKDSSQRLPLHKLLEHPWIIQ 271
+S+ LV +R + L HP+ Q
Sbjct: 264 VSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 137/282 (48%), Gaps = 37/282 (13%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G G +G VY A+ K+ + + + + RE+ I L+H NI++LY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI--RLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSER-RAATYVASLARALIYCHGKHVIHRDI 142
+ +KR+ L+ E+ + +L K L C+ E A +++ L + YCH + V+HRD+
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL 126
Query: 143 KPENLLIGAQGELKIADFGWSVHTFN---RRRT-MCGTLDYLPPE-MVESVEHDANVDIW 197
KP+NLLI +GELKIADFG + F R+ T TL Y P+ ++ S ++ +DIW
Sbjct: 127 KPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 198 SLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV------------------DLKFP---PKP 236
S+G + E + G P F +D RI ++ D F P P
Sbjct: 186 SVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLP 245
Query: 237 IVS------SAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQN 272
S + DL+S+ML D +QR+ + LEH + +N
Sbjct: 246 WESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 137/282 (48%), Gaps = 37/282 (13%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G G +G VY A+ K+ + + + + RE+ I L+H NI++LY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI--RLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSER-RAATYVASLARALIYCHGKHVIHRDI 142
+ +KR+ L+ E+ + +L K L C+ E A +++ L + YCH + V+HRD+
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL 126
Query: 143 KPENLLIGAQGELKIADFGWSVHTFN---RRRT-MCGTLDYLPPE-MVESVEHDANVDIW 197
KP+NLLI +GELKIADFG + F R+ T TL Y P+ ++ S ++ +DIW
Sbjct: 127 KPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 198 SLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV------------------DLKFP---PKP 236
S+G + E + G P F +D RI ++ D F P P
Sbjct: 186 SVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLP 245
Query: 237 IVS------SAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQN 272
S + DL+S+ML D +QR+ + LEH + +N
Sbjct: 246 WESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 137/282 (48%), Gaps = 37/282 (13%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G G +G VY A+ K+ + + + + RE+ I L+H NI++LY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI--RLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSER-RAATYVASLARALIYCHGKHVIHRDI 142
+ +KR+ L+ E+ + +L K L C+ E A +++ L + YCH + V+HRD+
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL 126
Query: 143 KPENLLIGAQGELKIADFGWSVHTFN---RRRT-MCGTLDYLPPE-MVESVEHDANVDIW 197
KP+NLLI +GELKIADFG + F R+ T TL Y P+ ++ S ++ +DIW
Sbjct: 127 KPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 198 SLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV------------------DLKFP---PKP 236
S+G + E + G P F +D RI ++ D F P P
Sbjct: 186 SVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLP 245
Query: 237 IVS------SAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQN 272
S + DL+S+ML D +QR+ + LEH + +N
Sbjct: 246 WESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 129/261 (49%), Gaps = 10/261 (3%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQ-QSQVEHQLRREVEIQSHLR 74
+DF+ LG G G V+ K S ++A K++ L+ + + +Q+ RE+++
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI---HLEIKPAIRNQIIRELQVLHECN 81
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
P I+ YG FY + + +E+ G L + L+K E+ ++ + L Y
Sbjct: 82 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 141
Query: 135 KH-VIHRDIKPENLLIGAQGELKIADFGWSVHTFNRR-RTMCGTLDYLPPEMVESVEHDA 192
KH ++HRD+KP N+L+ ++GE+K+ DFG S + + GT Y+ PE ++ +
Sbjct: 142 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 201
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFP----PKPIVSSAAKDLISQ 248
DIWS+G+ E G P + S ++ + P P + S +D +++
Sbjct: 202 QSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNK 261
Query: 249 MLVKDSSQRLPLHKLLEHPWI 269
L+K+ ++R L +L+ H +I
Sbjct: 262 CLIKNPAERADLKQLMVHAFI 282
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 16/269 (5%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
D+++ +G G +G R K I+ K L + +++ + L EV + L+HP
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAE-KQMLVSEVNLLRELKHP 65
Query: 77 NILRLYGYFYDQKR--VYLILEYAAKGELYKELQKC----KYFSERRAATYVASLARALI 130
NI+R Y D+ +Y+++EY G+L + K +Y E + L AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 131 YCH-----GKHVIHRDIKPENLLIGAQGELKIADFGWS---VHTFNRRRTMCGTLDYLPP 182
CH G V+HRD+KP N+ + + +K+ DFG + H + + GT Y+ P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSP 185
Query: 183 EMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAA 242
E + + ++ DIWSLG L YE +PPF A + +I + + P S
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYR-YSDEL 244
Query: 243 KDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
++I++ML R + ++LE+P I++
Sbjct: 245 NEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 10/206 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
+++G+ LG G V+LAR+ R + VA+KVL + + RRE + + L HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 78 ILRLYGYFYDQKRV----YLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
I+ +Y + Y+++EY L + + +RA +A +AL + H
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGW------SVHTFNRRRTMCGTLDYLPPEMVES 187
+IHRD+KP N+LI A +K+ DFG S ++ + + GT YL PE
Sbjct: 134 QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARG 193
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPF 213
DA D++SLG + YE L G PPF
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 16/269 (5%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
D+++ +G G +G R K I+ K L + +++ + L EV + L+HP
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAE-KQMLVSEVNLLRELKHP 65
Query: 77 NILRLYGYFYDQKR--VYLILEYAAKGELYKELQKC----KYFSERRAATYVASLARALI 130
NI+R Y D+ +Y+++EY G+L + K +Y E + L AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 131 YCH-----GKHVIHRDIKPENLLIGAQGELKIADFGWS---VHTFNRRRTMCGTLDYLPP 182
CH G V+HRD+KP N+ + + +K+ DFG + H + + GT Y+ P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSP 185
Query: 183 EMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAA 242
E + + ++ DIWSLG L YE +PPF A + +I + + P S
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYR-YSDEL 244
Query: 243 KDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
++I++ML R + ++LE+P I++
Sbjct: 245 NEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 133/274 (48%), Gaps = 27/274 (9%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRR---EVEIQSHLR 74
++I LG G FG VY A+ K ++ + A KV+ ++ E +L E++I +
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVI------DTKSEEELEDYMVEIDILASCD 92
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYK-ELQKCKYFSERRAATYVASLARALIYCH 133
HPNI++L FY + +++++E+ A G + L+ + +E + AL Y H
Sbjct: 93 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWS---VHTFNRRRTMCGTLDYLPPEMV----- 185
+IHRD+K N+L G++K+ADFG S T RR + GT ++ PE+V
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 186 ESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIV-----SS 240
+ +D D+WSLG+ E PP H R++ K P + SS
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPP----HHELNPMRVLLKIAKSEPPTLAQPSRWSS 268
Query: 241 AAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNAD 274
KD + + L K+ R +LL+HP++ +++
Sbjct: 269 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 302
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 10/206 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
+++G+ LG G V+LAR+ R + VA+KVL + + RRE + + L HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 78 ILRLYGYFYDQKRV----YLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
I+ +Y + Y+++EY L + + +RA +A +AL + H
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGW------SVHTFNRRRTMCGTLDYLPPEMVES 187
+IHRD+KP N++I A +K+ DFG S ++ + + GT YL PE
Sbjct: 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPF 213
DA D++SLG + YE L G PPF
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 10/206 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
+++G+ LG G V+LAR+ R + VA+KVL + + RRE + + L HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 78 ILRLYGYFYDQKRV----YLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
I+ +Y + Y+++EY L + + +RA +A +AL + H
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGW------SVHTFNRRRTMCGTLDYLPPEMVES 187
+IHRD+KP N++I A +K+ DFG S ++ + + GT YL PE
Sbjct: 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPF 213
DA D++SLG + YE L G PPF
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 134/266 (50%), Gaps = 15/266 (5%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ--VEHQLRREVEIQSHLRH 75
+++ + +G+G F V + + A+K++ ++ S L+RE I L+H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 76 PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK----YFSERRAATYVASLARALIY 131
P+I+ L + +Y++ E+ +L E+ K +SE A+ Y+ + AL Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 132 CHGKHVIHRDIKPENLLIGAQ---GELKIADFGWSVHTFNRRRTM---CGTLDYLPPEMV 185
CH ++IHRD+KP +L+ ++ +K+ FG ++ GT ++ PE+V
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 207
Query: 186 ESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAK 243
+ + VD+W GV+ + L G PF + + I++ K P+ +S +AK
Sbjct: 208 KREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQWSHISESAK 266
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPWI 269
DL+ +ML+ D ++R+ +++ L HPW+
Sbjct: 267 DLVRRMLMLDPAERITVYEALNHPWL 292
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 134/266 (50%), Gaps = 15/266 (5%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ--VEHQLRREVEIQSHLRH 75
+++ + +G+G F V + + A+K++ ++ S L+RE I L+H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 76 PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK----YFSERRAATYVASLARALIY 131
P+I+ L + +Y++ E+ +L E+ K +SE A+ Y+ + AL Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 132 CHGKHVIHRDIKPENLLIGAQ---GELKIADFGWSVHTFNRRRTM---CGTLDYLPPEMV 185
CH ++IHRD+KP +L+ ++ +K+ FG ++ GT ++ PE+V
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 186 ESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAK 243
+ + VD+W GV+ + L G PF + + I++ K P+ +S +AK
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQWSHISESAK 264
Query: 244 DLISQMLVKDSSQRLPLHKLLEHPWI 269
DL+ +ML+ D ++R+ +++ L HPW+
Sbjct: 265 DLVRRMLMLDPAERITVYEALNHPWL 290
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 10/206 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
+++G+ LG G V+LAR+ R + VA+KVL + + RRE + + L HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 78 ILRLYGYFYDQKRV----YLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
I+ +Y + Y+++EY L + + +RA +A +AL + H
Sbjct: 74 IVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGW------SVHTFNRRRTMCGTLDYLPPEMVES 187
+IHRD+KP N++I A +K+ DFG S ++ + + GT YL PE
Sbjct: 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPF 213
DA D++SLG + YE L G PPF
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 132/268 (49%), Gaps = 25/268 (9%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRR---EVEIQSHLR 74
++I LG G FG VY A+ K + + A KV+ +++ E +L E+EI +
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVI------ETKSEEELEDYIVEIEILATCD 66
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYK-ELQKCKYFSERRAATYVASLARALIYCH 133
HP I++L G +Y ++++++E+ G + L+ + +E + + AL + H
Sbjct: 67 HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH 126
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWS---VHTFNRRRTMCGTLDYLPPEMV----- 185
K +IHRD+K N+L+ +G++++ADFG S + T +R + GT ++ PE+V
Sbjct: 127 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETM 186
Query: 186 ESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSS----A 241
+ +D DIWSLG+ E PP +I + D PP + S
Sbjct: 187 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD---PPTLLTPSKWSVE 243
Query: 242 AKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+D + L K+ R +LLEHP++
Sbjct: 244 FRDFLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 6/257 (2%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQ-QSQVEHQLRREVEIQSHLR 74
+DF+ LG G G V+ K S ++A K++ L+ + + +Q+ RE+++
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI---HLEIKPAIRNQIIRELQVLHECN 65
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
P I+ YG FY + + +E+ G L + L+K E+ ++ + L Y
Sbjct: 66 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 125
Query: 135 KH-VIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVESVEHDA 192
KH ++HRD+KP N+L+ ++GE+K+ DFG S + GT Y+ PE ++ +
Sbjct: 126 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSV 185
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVK 252
DIWS+G+ E G P + IV P + S +D +++ L+K
Sbjct: 186 QSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIK 245
Query: 253 DSSQRLPLHKLLEHPWI 269
+ ++R L +L+ H +I
Sbjct: 246 NPAERADLKQLMVHAFI 262
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 132/268 (49%), Gaps = 25/268 (9%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRR---EVEIQSHLR 74
++I LG G FG VY A+ K + + A KV+ +++ E +L E+EI +
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVI------ETKSEEELEDYIVEIEILATCD 74
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYK-ELQKCKYFSERRAATYVASLARALIYCH 133
HP I++L G +Y ++++++E+ G + L+ + +E + + AL + H
Sbjct: 75 HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH 134
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWS---VHTFNRRRTMCGTLDYLPPEMV----- 185
K +IHRD+K N+L+ +G++++ADFG S + T +R + GT ++ PE+V
Sbjct: 135 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETM 194
Query: 186 ESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSS----A 241
+ +D DIWSLG+ E PP +I + D PP + S
Sbjct: 195 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD---PPTLLTPSKWSVE 251
Query: 242 AKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+D + L K+ R +LLEHP++
Sbjct: 252 FRDFLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 10/206 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
+++G+ LG G V+LAR+ R + VA+KVL + + RRE + + L HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 78 ILRLYGYFYDQKRV----YLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
I+ +Y + Y+++EY L + + +RA +A +AL + H
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGW------SVHTFNRRRTMCGTLDYLPPEMVES 187
+IHRD+KP N++I A +K+ DFG S ++ + + GT YL PE
Sbjct: 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPF 213
DA D++SLG + YE L G PPF
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 127/255 (49%), Gaps = 15/255 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G+G FG VY + + +VA+K++ + + + Q +E+ + S P I R +G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYITRYFG 84
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ ++++I+EY G +L K E AT + + + L Y H + IHRDIK
Sbjct: 85 SYLKSTKLWIIMEYLGGGSAL-DLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIK 143
Query: 144 PENLLIGAQGELKIADFGWS---VHTFNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
N+L+ QG++K+ADFG + T +R GT ++ PE+++ +D DIWSLG
Sbjct: 144 AANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLG 203
Query: 201 VLCYEFLYGVPPFEAKEHSDTY-RRIVQVDLKFPPKPIV---SSAAKDLISQMLVKDSSQ 256
+ E G PP +SD + R++ + K P + S K+ + L KD
Sbjct: 204 ITAIELAKGEPP-----NSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVEACLNKDPRF 258
Query: 257 RLPLHKLLEHPWIIQ 271
R +LL+H +I +
Sbjct: 259 RPTAKELLKHKFITR 273
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 126/252 (50%), Gaps = 12/252 (4%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G+G G VY A + + VA++ + LQQ + + E+ + ++PNI+
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ +++++EY A G L + + E + A +AL + H VIHRDIK
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 144 PENLLIGAQGELKIADFGWSVHTF---NRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
+N+L+G G +K+ DFG+ ++R TM GT ++ PE+V + VDIWSLG
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG 203
Query: 201 VLCYEFLYGVPPFEAKEHSDTYRRIV---QVDLKFPPKPIVSSAAKDLISQMLVKDSSQR 257
++ E + G PP+ + I +L+ P K +S+ +D +++ L D +R
Sbjct: 204 IMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEK--LSAIFRDFLNRCLDMDVEKR 261
Query: 258 LPLHKLLEHPWI 269
+LL+H ++
Sbjct: 262 GSAKELLQHQFL 273
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 127/262 (48%), Gaps = 11/262 (4%)
Query: 20 IGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
I + LGRG+FG V+ E S K + Q V ++E+ I + RH NIL
Sbjct: 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLV----KKEISILNIARHRNIL 64
Query: 80 RLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARALIYCHGKHVI 138
L+ F + + +I E+ + ++++ + + +ER +YV + AL + H ++
Sbjct: 65 HLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIG 124
Query: 139 HRDIKPENLLIGAQ--GELKIADFGWS--VHTFNRRRTMCGTLDYLPPEMVESVEHDANV 194
H DI+PEN++ + +KI +FG + + + R + +Y PE+ +
Sbjct: 125 HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTAT 184
Query: 195 DIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAKDLISQMLVK 252
D+WSLG L Y L G+ PF A+ + I+ + F + +S A D + ++LVK
Sbjct: 185 DMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVK 244
Query: 253 DSSQRLPLHKLLEHPWIIQNAD 274
+ R+ + L+HPW+ Q +
Sbjct: 245 ERKSRMTASEALQHPWLKQKIE 266
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 10/206 (4%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
+++G+ LG G V+LAR+ R + VA+KVL + + RRE + + L HP
Sbjct: 31 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 90
Query: 78 ILRLYGYFYDQKRV----YLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
I+ +Y + Y+++EY L + + +RA +A +AL + H
Sbjct: 91 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 150
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGW------SVHTFNRRRTMCGTLDYLPPEMVES 187
+IHRD+KP N++I A +K+ DFG S ++ + + GT YL PE
Sbjct: 151 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 210
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPF 213
DA D++SLG + YE L G PPF
Sbjct: 211 DSVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 132/274 (48%), Gaps = 27/274 (9%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRR---EVEIQSHLR 74
++I LG G FG VY A+ K ++ + A KV+ ++ E +L E++I +
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVI------DTKSEEELEDYMVEIDILASCD 92
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYK-ELQKCKYFSERRAATYVASLARALIYCH 133
HPNI++L FY + +++++E+ A G + L+ + +E + AL Y H
Sbjct: 93 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHT---FNRRRTMCGTLDYLPPEMV----- 185
+IHRD+K N+L G++K+ADFG S RR + GT ++ PE+V
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 186 ESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIV-----SS 240
+ +D D+WSLG+ E PP H R++ K P + SS
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPP----HHELNPMRVLLKIAKSEPPTLAQPSRWSS 268
Query: 241 AAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNAD 274
KD + + L K+ R +LL+HP++ +++
Sbjct: 269 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 302
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 139/302 (46%), Gaps = 49/302 (16%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 60
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVAS 124
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQ 112
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLP 181
L + L +CH V+HRD+KPENLLI +G +K+ADFG + RT TL Y
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 182 PEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP-- 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 234 ----------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
PK P + + L+SQML D ++R+ L HP+
Sbjct: 233 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
Query: 274 DP 275
P
Sbjct: 293 KP 294
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 139/302 (46%), Gaps = 49/302 (16%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 61
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVAS 124
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQ 113
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLP 181
L + L +CH V+HRD+KPENLLI +G +K+ADFG + RT TL Y
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 182 PEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP-- 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 234 ----------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
PK P + + L+SQML D ++R+ L HP+
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
Query: 274 DP 275
P
Sbjct: 294 KP 295
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 125/259 (48%), Gaps = 19/259 (7%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVLFKSQ-LQQSQVEH----QLRREVEIQSHLRHPN 77
PLG G FG V+ A +K N V +K + K + L+ +E ++ E+ I S + H N
Sbjct: 31 PLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHAN 90
Query: 78 ILRLYGYFYDQKRVYLILEYAAKG-ELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
I+++ F +Q L++E G +L+ + + E A+ L A+ Y K
Sbjct: 91 IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD 150
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRR---TMCGTLDYLPPEMVESVEHDA- 192
+IHRDIK EN++I +K+ DFG S R + T CGT++Y PE++ +
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFG-SAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGP 209
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVK 252
+++WSLGV Y ++ PF E + V+ P +VS L+S +L
Sbjct: 210 ELEMWSLGVTLYTLVFEENPFCELEET--------VEAAIHPPYLVSKELMSLVSGLLQP 261
Query: 253 DSSQRLPLHKLLEHPWIIQ 271
+R L KL+ PW+ Q
Sbjct: 262 VPERRTTLEKLVTDPWVTQ 280
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 27/274 (9%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRR---EVEIQSHLR 74
++I LG G FG VY A+ K ++ + A KV+ ++ E +L E++I +
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVI------DTKSEEELEDYMVEIDILASCD 92
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYK-ELQKCKYFSERRAATYVASLARALIYCH 133
HPNI++L FY + +++++E+ A G + L+ + +E + AL Y H
Sbjct: 93 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHT---FNRRRTMCGTLDYLPPEMV----- 185
+IHRD+K N+L G++K+ADFG S RR GT ++ PE+V
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETS 212
Query: 186 ESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIV-----SS 240
+ +D D+WSLG+ E PP H R++ K P + SS
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPP----HHELNPMRVLLKIAKSEPPTLAQPSRWSS 268
Query: 241 AAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNAD 274
KD + + L K+ R +LL+HP++ +++
Sbjct: 269 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 302
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 140/305 (45%), Gaps = 55/305 (18%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 60
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVAS 124
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQ 112
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLD 178
L + L +CH V+HRD+KP+NLLI +G +K+ADFG + V T+ TL
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLW 169
Query: 179 YLPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKF 232
Y PE++ + + VDIWSLG + E + F D RI + ++ +
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
Query: 233 P------------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWII 270
P PK P + + L+SQML D ++R+ L HP+
Sbjct: 230 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
Query: 271 QNADP 275
P
Sbjct: 290 DVTKP 294
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 128/292 (43%), Gaps = 43/292 (14%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLR--REVEIQSHLRHPNIL 79
+P+G G +G V A + R VA+K L S+ QS + H R RE+ + HL+H N++
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKL--SRPFQSLI-HARRTYRELRLLKHLKHENVI 90
Query: 80 RLYGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F D VYL+ G + KC+ S+ V L R L Y H
Sbjct: 91 GLLDVFTPATSIEDFSEVYLVT--TLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 148
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP N+ + EL+I DFG + T Y PE M+ + ++
Sbjct: 149 SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV--------------------DLKF 232
VDIWS+G + E L G F ++ D +RI++V
Sbjct: 209 TVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSL 268
Query: 233 PPKP------IVSSA---AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADP 275
PP P I A A DL+ +MLV DS QR+ + L H + Q DP
Sbjct: 269 PPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDP 320
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 129/256 (50%), Gaps = 20/256 (7%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G+G G VY A + + VA++ + LQQ + + E+ + ++PNI+
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIR---QMNLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 84 YFYDQKRVYLILEYAAKGELYKEL-QKCKYFSERRAATYVASLARALIYCHGKHVIHRDI 142
+ +++++EY A G L + + C E + A +AL + H VIHRDI
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQVIHRDI 142
Query: 143 KPENLLIGAQGELKIADFGWSVHTF---NRRRTMCGTLDYLPPEMVESVEHDANVDIWSL 199
K +N+L+G G +K+ DFG+ ++R M GT ++ PE+V + VDIWSL
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 200 GVLCYEFLYGVPPFEAKEHSDTYRRIVQV------DLKFPPKPIVSSAAKDLISQMLVKD 253
G++ E + G PP+ + + R + + +L+ P K +S+ +D +++ L D
Sbjct: 203 GIMAIEMIEGEPPY---LNENPLRALYLIATNGTPELQNPEK--LSAIFRDFLNRCLEMD 257
Query: 254 SSQRLPLHKLLEHPWI 269
+R +LL+H ++
Sbjct: 258 VEKRGSAKELLQHQFL 273
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 139/302 (46%), Gaps = 49/302 (16%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 59
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVAS 124
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQ 111
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLP 181
L + L +CH V+HRD+KP+NLLI +G +K+ADFG + RT TL Y
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 182 PEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP-- 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 234 ----------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
PK P + + L+SQML D ++R+ L HP+
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
Query: 274 DP 275
P
Sbjct: 292 KP 293
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 131/294 (44%), Gaps = 47/294 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ H VA+K L F+S + + RE+ + H++H N++
Sbjct: 49 PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 104
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 105 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQ 222
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPP----KPIVSSAAK----- 243
VDIWS+G + E L G F +H D + I+++ + P K I S +A+
Sbjct: 223 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKISSESARNYIQS 281
Query: 244 ---------------------DLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 282 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 335
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 139/302 (46%), Gaps = 49/302 (16%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 59
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVAS 124
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQ 111
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLP 181
L + L +CH V+HRD+KP+NLLI +G +K+ADFG + RT TL Y
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 182 PEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP-- 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 234 ----------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
PK P + + L+SQML D ++R+ L HP+
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
Query: 274 DP 275
P
Sbjct: 292 KP 293
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 139/302 (46%), Gaps = 49/302 (16%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 59
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVAS 124
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQ 111
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLP 181
L + L +CH V+HRD+KP+NLLI +G +K+ADFG + RT TL Y
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 182 PEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP-- 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 234 ----------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
PK P + + L+SQML D ++R+ L HP+
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
Query: 274 DP 275
P
Sbjct: 292 KP 293
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 129/293 (44%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ H VA+K L F+S + + RE+ + H++H N++
Sbjct: 29 PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 84
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQ 202
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 131/294 (44%), Gaps = 47/294 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ H VA+K L F+S + + RE+ + H++H N++
Sbjct: 29 PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 84
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQ 202
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPP----KPIVSSAAK----- 243
VDIWS+G + E L G F +H D + I+++ + P K I S +A+
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKISSESARNYIQS 261
Query: 244 ---------------------DLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 262 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 55/304 (18%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 60
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVASL 125
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQL 112
Query: 126 ARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDY 179
+ L +CH V+HRD+KP+NLLI +G +K+ADFG + V T+ TL Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWY 169
Query: 180 LPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 234 ------------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
PK P + + L+SQML D ++R+ L HP+
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 272 NADP 275
P
Sbjct: 290 VTKP 293
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 4/203 (1%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
+ I LG G VYLA + N VA+K +F ++ + + REV S L H N
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 78 ILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHV 137
I+ + + YL++EY L + ++ S A + + + + H +
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRI 132
Query: 138 IHRDIKPENLLIGAQGELKIADFG----WSVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+HRDIKP+N+LI + LKI DFG S + + + GT+ Y PE + D
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDEC 192
Query: 194 VDIWSLGVLCYEFLYGVPPFEAK 216
DI+S+G++ YE L G PPF +
Sbjct: 193 TDIYSIGIVLYEMLVGEPPFNGE 215
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 55/304 (18%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 59
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVASL 125
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+ L
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQL 111
Query: 126 ARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDY 179
+ L +CH V+HRD+KP+NLLI +G +K+ADFG + V T+ TL Y
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWY 168
Query: 180 LPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 234 ------------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
PK P + + L+SQML D ++R+ L HP+
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 272 NADP 275
P
Sbjct: 289 VTKP 292
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 139/302 (46%), Gaps = 49/302 (16%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 61
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVAS 124
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQ 113
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLP 181
L + L +CH V+HRD+KP+NLLI +G +K+ADFG + RT TL Y
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 182 PEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP-- 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 234 ----------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
PK P + + L+SQML D ++R+ L HP+
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
Query: 274 DP 275
P
Sbjct: 294 KP 295
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 49/296 (16%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 59
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVAS 124
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQ 111
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLP 181
L + L +CH V+HRD+KP+NLLI +G +K+ADFG + RT TL Y
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 182 PEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP-- 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 234 ----------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
PK P + + L+SQML D ++R+ L HP+
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 139/302 (46%), Gaps = 49/302 (16%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 63
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVAS 124
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQ 115
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLP 181
L + L +CH V+HRD+KP+NLLI +G +K+ADFG + RT TL Y
Sbjct: 116 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 175
Query: 182 PEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP-- 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 235
Query: 234 ----------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
PK P + + L+SQML D ++R+ L HP+
Sbjct: 236 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 295
Query: 274 DP 275
P
Sbjct: 296 KP 297
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 139/302 (46%), Gaps = 49/302 (16%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 62
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVAS 124
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQ 114
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLP 181
L + L +CH V+HRD+KP+NLLI +G +K+ADFG + RT TL Y
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 182 PEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP-- 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 234 ----------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
PK P + + L+SQML D ++R+ L HP+
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
Query: 274 DP 275
P
Sbjct: 295 KP 296
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 55/304 (18%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 60
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVASL 125
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQL 112
Query: 126 ARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDY 179
+ L +CH V+HRD+KP+NLLI +G +K+ADFG + V T+ TL Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWY 169
Query: 180 LPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 234 ------------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
PK P + + L+SQML D ++R+ L HP+
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 272 NADP 275
P
Sbjct: 290 VTKP 293
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 139/302 (46%), Gaps = 49/302 (16%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 60
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVAS 124
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQ 112
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLP 181
L + L +CH V+HRD+KP+NLLI +G +K+ADFG + RT TL Y
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 182 PEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP-- 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 234 ----------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
PK P + + L+SQML D ++R+ L HP+
Sbjct: 233 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
Query: 274 DP 275
P
Sbjct: 293 KP 294
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 131/294 (44%), Gaps = 47/294 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ H VA+K L F+S + + RE+ + H++H N++
Sbjct: 25 PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 80
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQ 198
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPP----KPIVSSAAK----- 243
VDIWS+G + E L G F +H D + I+++ + P K I S +A+
Sbjct: 199 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKISSESARNYIQS 257
Query: 244 ---------------------DLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 258 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 29/273 (10%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
F++ + +G G +G VY R ++ + A+KV+ + ++ +++ ++ ++ + H N
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINM---LKKYSHHRN 82
Query: 78 ILRLYGYFYDQK------RVYLILEYAAKGELYKELQKCK--YFSERRAATYVASLARAL 129
I YG F + +++L++E+ G + ++ K E A + R L
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL 142
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVH---TFNRRRTMCGTLDYLPPEMVE 186
+ H VIHRDIK +N+L+ E+K+ DFG S T RR T GT ++ PE++
Sbjct: 143 SHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIA 202
Query: 187 SVE-----HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA 241
E +D D+WSLG+ E G PP D + + P P + S
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMAEGAPPL-----CDMHPMRALFLIPRNPAPRLKSK 257
Query: 242 A-----KDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ I LVK+ SQR +L++HP+I
Sbjct: 258 KWSKKFQSFIESCLVKNHSQRPATEQLMKHPFI 290
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 125/277 (45%), Gaps = 27/277 (9%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG G F +V L H ALK + + QQ + E Q RE ++ HPNILRL
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHE-QQDREEAQ--READMHRLFNHPNILRLVA 93
Query: 84 YFYDQK----RVYLILEYAAKGELYKELQKCK----YFSERRAATYVASLARALIYCHGK 135
Y ++ +L+L + +G L+ E+++ K + +E + + + R L H K
Sbjct: 94 YCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK 153
Query: 136 HVIHRDIKPENLLIGAQGELKIADFG----WSVHTFNRRRTMC--------GTLDYLPPE 183
HRD+KP N+L+G +G+ + D G +H R+ + T+ Y PE
Sbjct: 154 GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPE 213
Query: 184 MVESVEH---DANVDIWSLGVLCYEFLYGVPPFEAK-EHSDTYRRIVQVDLKFPPKPIVS 239
+ H D D+WSLG + Y ++G P++ + D+ VQ L P P S
Sbjct: 214 LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHS 273
Query: 240 SAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
SA L++ M+ D QR + LL +Q P
Sbjct: 274 SALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 135/283 (47%), Gaps = 48/283 (16%)
Query: 10 KKRWTLNDFDI-GKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
KK ++D+ + + LG G G V KR+ ALK+L Q + RREVE
Sbjct: 11 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVE 62
Query: 69 IQSHLRH---PNILRL---YGYFYDQKRVYLI-LEYAAKGELYKELQK--CKYFSERRAA 119
+ H R P+I+R+ Y Y ++ LI +E GEL+ +Q + F+ER A+
Sbjct: 63 L--HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 120
Query: 120 TYVASLARALIYCHGKHVIHRDIKPENLLIGAQ---GELKIADFGWSVHTFNRRRTMCGT 176
+ S+ A+ Y H ++ HRD+KPENLL ++ LK+ DFG++ T +
Sbjct: 121 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEK------ 174
Query: 177 LDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKE------HSDTYRRIVQVDL 230
+D + D+WSLGV+ Y L G PPF + T R+ Q +
Sbjct: 175 -------------YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF 221
Query: 231 KFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
P VS K LI +L + +QR+ + + + HPWI+Q+
Sbjct: 222 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 139/302 (46%), Gaps = 49/302 (16%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 62
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVAS 124
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQ 114
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLP 181
L + L +CH V+HRD+KP+NLLI +G +K+ADFG + RT TL Y
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 182 PEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP-- 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 234 ----------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
PK P + + L+SQML D ++R+ L HP+
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
Query: 274 DP 275
P
Sbjct: 295 KP 296
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 139/302 (46%), Gaps = 49/302 (16%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 61
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVAS 124
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQ 113
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLP 181
L + L +CH V+HRD+KP+NLLI +G +K+ADFG + RT TL Y
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 182 PEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP-- 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 234 ----------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
PK P + + L+SQML D ++R+ L HP+
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
Query: 274 DP 275
P
Sbjct: 294 KP 295
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 129/256 (50%), Gaps = 20/256 (7%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G+G G VY A + + VA++ + LQQ + + E+ + ++PNI+
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 84 YFYDQKRVYLILEYAAKGELYKEL-QKCKYFSERRAATYVASLARALIYCHGKHVIHRDI 142
+ +++++EY A G L + + C E + A +AL + H VIHRDI
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQVIHRDI 142
Query: 143 KPENLLIGAQGELKIADFGWSVHTF---NRRRTMCGTLDYLPPEMVESVEHDANVDIWSL 199
K +N+L+G G +K+ DFG+ ++R M GT ++ PE+V + VDIWSL
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 200 GVLCYEFLYGVPPFEAKEHSDTYRRIVQV------DLKFPPKPIVSSAAKDLISQMLVKD 253
G++ E + G PP+ + + R + + +L+ P K +S+ +D +++ L D
Sbjct: 203 GIMAIEMIEGEPPY---LNENPLRALYLIATNGTPELQNPEK--LSAIFRDFLNRCLDMD 257
Query: 254 SSQRLPLHKLLEHPWI 269
+R +LL+H ++
Sbjct: 258 VEKRGSAKELLQHQFL 273
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 134/302 (44%), Gaps = 49/302 (16%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 59
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVAS 124
HPNI++L + + ++YL+ E+ Q K F + A T Y+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLH--------QDLKDFMDASALTGIPLPLIKSYLFQ 111
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLP 181
L + L +CH V+HRD+KPENLLI +G +K+ADFG + RT TL Y
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 182 PEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP-- 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231
Query: 234 ----------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
PK P + + L+SQML D ++R+ L HP+
Sbjct: 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
Query: 274 DP 275
P
Sbjct: 292 KP 293
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 55/304 (18%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 60
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVASL 125
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQL 112
Query: 126 ARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDY 179
+ L +CH V+HRD+KP+NLLI +G +K+ADFG + V T+ TL Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE---VVTLWY 169
Query: 180 LPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 170 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 234 ------------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
PK P + + L+SQML D ++R+ L HP+
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 272 NADP 275
P
Sbjct: 290 VTKP 293
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 55/304 (18%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 67
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVASL 125
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+ L
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQL 119
Query: 126 ARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDY 179
+ L +CH V+HRD+KP+NLLI +G +K+ADFG + V T+ TL Y
Sbjct: 120 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWY 176
Query: 180 LPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 177 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 236
Query: 234 ------------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
PK P + + L+SQML D ++R+ L HP+
Sbjct: 237 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
Query: 272 NADP 275
P
Sbjct: 297 VTKP 300
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 131/294 (44%), Gaps = 47/294 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ H VA+K L F+S + + RE+ + H++H N++
Sbjct: 49 PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 104
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 105 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 222
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPP----KPIVSSAAK----- 243
VDIWS+G + E L G F +H D + I+++ + P K I S +A+
Sbjct: 223 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKISSESARNYIQS 281
Query: 244 ---------------------DLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 282 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 335
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 129/255 (50%), Gaps = 18/255 (7%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G+G G VY A + + VA++ + LQQ + + E+ + ++PNI+
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIR---QMNLQQQPKKELIINEILVMRENKNPNIVNYLD 85
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ +++++EY A G L + + E + A +AL + H VIHR+IK
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRNIK 144
Query: 144 PENLLIGAQGELKIADFGWSVHTF---NRRRTMCGTLDYLPPEMVESVEHDANVDIWSLG 200
+N+L+G G +K+ DFG+ ++R TM GT ++ PE+V + VDIWSLG
Sbjct: 145 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG 204
Query: 201 VLCYEFLYGVPPFEAKEHSDTYRRIVQV------DLKFPPKPIVSSAAKDLISQMLVKDS 254
++ E + G PP+ + + R + + +L+ P K +S+ +D +++ L D
Sbjct: 205 IMAIEMIEGEPPY---LNENPLRALYLIATNGTPELQNPEK--LSAIFRDFLNRCLEMDV 259
Query: 255 SQRLPLHKLLEHPWI 269
+R +L++H ++
Sbjct: 260 EKRGSAKELIQHQFL 274
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 55/304 (18%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 64
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVASL 125
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+ L
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQL 116
Query: 126 ARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDY 179
+ L +CH V+HRD+KP+NLLI +G +K+ADFG + V T+ TL Y
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWY 173
Query: 180 LPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 233
Query: 234 ------------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
PK P + + L+SQML D ++R+ L HP+
Sbjct: 234 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
Query: 272 NADP 275
P
Sbjct: 294 VTKP 297
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 137/302 (45%), Gaps = 49/302 (16%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 60
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVAS 124
HPNI++L + + ++YL+ E+ L +L+K F + A T Y+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEF-----LSMDLKK---FMDASALTGIPLPLIKSYLFQ 112
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLP 181
L + L +CH V+HRD+KPENLLI +G +K+ADFG + RT TL Y
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 182 PEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP-- 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 232
Query: 234 ----------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
PK P + + L+SQML D ++R+ L HP+
Sbjct: 233 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
Query: 274 DP 275
P
Sbjct: 293 KP 294
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 131/294 (44%), Gaps = 47/294 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ H VA+K L F+S + + RE+ + H++H N++
Sbjct: 35 PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 90
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPP----KPIVSSAAK----- 243
VDIWS+G + E L G F +H D + I+++ + P K I S +A+
Sbjct: 209 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKISSESARNYIQS 267
Query: 244 ---------------------DLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 268 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 321
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 131/294 (44%), Gaps = 47/294 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ H VA+K L F+S + + RE+ + H++H N++
Sbjct: 48 PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 103
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 104 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 161
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 162 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 221
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPP----KPIVSSAAK----- 243
VDIWS+G + E L G F +H D + I+++ + P K I S +A+
Sbjct: 222 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKISSESARNYIQS 280
Query: 244 ---------------------DLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 281 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 334
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 55/304 (18%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 67
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVASL 125
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+ L
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQL 119
Query: 126 ARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDY 179
+ L +CH V+HRD+KP+NLLI +G +K+ADFG + V T+ TL Y
Sbjct: 120 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWY 176
Query: 180 LPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 177 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 236
Query: 234 ------------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
PK P + + L+SQML D ++R+ L HP+
Sbjct: 237 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
Query: 272 NADP 275
P
Sbjct: 297 VTKP 300
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 131/294 (44%), Gaps = 47/294 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ H VA+K L F+S + + RE+ + H++H N++
Sbjct: 25 PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 80
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPP----KPIVSSAAK----- 243
VDIWS+G + E L G F +H D + I+++ + P K I S +A+
Sbjct: 199 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKISSESARNYIQS 257
Query: 244 ---------------------DLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 258 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 131/294 (44%), Gaps = 47/294 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ H VA+K L F+S + + RE+ + H++H N++
Sbjct: 29 PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 84
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPP----KPIVSSAAK----- 243
VDIWS+G + E L G F +H D + I+++ + P K I S +A+
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKISSESARNYIQS 261
Query: 244 ---------------------DLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 262 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 138/301 (45%), Gaps = 49/301 (16%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 59
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVASL 125
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+ L
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQL 111
Query: 126 ARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLPP 182
+ L +CH V+HRD+KP+NLLI +G +K+ADFG + RT TL Y P
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 171
Query: 183 EMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP--- 233
E++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 234 ---------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNAD 274
PK P + + L+SQML D ++R+ L HP+
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
Query: 275 P 275
P
Sbjct: 292 P 292
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 137/302 (45%), Gaps = 49/302 (16%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 62
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVAS 124
HPNI++L + + ++YL+ E+ L +L+K F + A T Y+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEF-----LSMDLKK---FMDASALTGIPLPLIKSYLFQ 114
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLP 181
L + L +CH V+HRD+KPENLLI +G +K+ADFG + RT TL Y
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 182 PEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP-- 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 234 ----------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
PK P + + L+SQML D ++R+ L HP+
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
Query: 274 DP 275
P
Sbjct: 295 KP 296
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 138/301 (45%), Gaps = 49/301 (16%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 59
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVASL 125
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+ L
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQL 111
Query: 126 ARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLPP 182
+ L +CH V+HRD+KP+NLLI +G +K+ADFG + RT TL Y P
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 171
Query: 183 EMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP--- 233
E++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 234 ---------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNAD 274
PK P + + L+SQML D ++R+ L HP+
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
Query: 275 P 275
P
Sbjct: 292 P 292
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 138/301 (45%), Gaps = 49/301 (16%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 61
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVASL 125
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQL 113
Query: 126 ARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLPP 182
+ L +CH V+HRD+KP+NLLI +G +K+ADFG + RT TL Y P
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 183 EMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP--- 233
E++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 234 ---------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNAD 274
PK P + + L+SQML D ++R+ L HP+
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
Query: 275 P 275
P
Sbjct: 294 P 294
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 131/294 (44%), Gaps = 47/294 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ H VA+K L F+S + + RE+ + H++H N++
Sbjct: 39 PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 94
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 95 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 152
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 153 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 212
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPP----KPIVSSAAK----- 243
VDIWS+G + E L G F +H D + I+++ + P K I S +A+
Sbjct: 213 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKISSESARNYIQS 271
Query: 244 ---------------------DLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 272 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 325
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 55/304 (18%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 60
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVASL 125
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQL 112
Query: 126 ARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDY 179
+ L +CH V+HRD+KP+NLLI +G +K+ADFG + V T+ TL Y
Sbjct: 113 LQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWY 169
Query: 180 LPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 234 ------------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
PK P + + L+SQML D ++R+ L HP+
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 272 NADP 275
P
Sbjct: 290 VTKP 293
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 128/292 (43%), Gaps = 43/292 (14%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLR--REVEIQSHLRHPNIL 79
+P+G G +G V A + R VA+K L S+ QS + H R RE+ + HL+H N++
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKL--SRPFQSLI-HARRTYRELRLLKHLKHENVI 82
Query: 80 RLYGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F D VYL+ G + KC+ S+ V L R L Y H
Sbjct: 83 GLLDVFTPATSIEDFSEVYLVT--TLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 140
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP N+ + EL+I DFG + T Y PE M+ + ++
Sbjct: 141 SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQ 200
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV--------------------DLKF 232
VDIWS+G + E L G F ++ D +RI++V
Sbjct: 201 TVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSL 260
Query: 233 PPKP------IVSSA---AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADP 275
PP P I A A DL+ +MLV DS QR+ + L H + Q DP
Sbjct: 261 PPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDP 312
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 135/290 (46%), Gaps = 56/290 (19%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQ------LRREVEIQSHLRHPN 77
LG G + VY + K ++++VALK + ++EH+ REV + L+H N
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALK--------EIRLEHEEGAPCTAIREVSLLKDLKHAN 61
Query: 78 ILRLYGYFYDQKRVYLILEYAAKGELYKELQKC-KYFSERRAATYVASLARALIYCHGKH 136
I+ L+ + +K + L+ EY K +L + L C + ++ L R L YCH +
Sbjct: 62 IVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPE-MVESVE 189
V+HRD+KP+NLLI +GELK+ADFG + T++ TL Y PP+ ++ S +
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV---TLWYRPPDILLGSTD 177
Query: 190 HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFP---------------- 233
+ +D+W +G + YE G P F + I ++ L P
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRI-LGTPTEETWPGILSNEEFKT 236
Query: 234 ---PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWII 270
PK P + S DL++++L + R+ ++HP+ +
Sbjct: 237 YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFL 286
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 135/295 (45%), Gaps = 55/295 (18%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G G +G VY AR K + +VALK + + + V RE+ + L HPNI++L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVASLARALIYCHG 134
+ + ++YL+ E+ L+++L+K F + A T Y+ L + L +CH
Sbjct: 69 VIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVESV 188
V+HRD+KP+NLLI +G +K+ADFG + V T+ TL Y PE++
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWYRAPEILLGC 177
Query: 189 E-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP--------- 233
+ + VDIWSLG + E + F D RI + ++ +P
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 234 ---PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADP 275
PK P + + L+SQML D ++R+ L HP+ P
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 129/256 (50%), Gaps = 20/256 (7%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G+G G VY A + + VA++ + LQQ + + E+ + ++PNI+
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIR---QMNLQQQPKKELIINEILVMRENKNPNIVNYLD 85
Query: 84 YFYDQKRVYLILEYAAKGELYKEL-QKCKYFSERRAATYVASLARALIYCHGKHVIHRDI 142
+ +++++EY A G L + + C E + A +AL + H VIHRDI
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQVIHRDI 143
Query: 143 KPENLLIGAQGELKIADFGWSVHTF---NRRRTMCGTLDYLPPEMVESVEHDANVDIWSL 199
K +N+L+G G +K+ DFG+ ++R M GT ++ PE+V + VDIWSL
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 200 GVLCYEFLYGVPPFEAKEHSDTYRRIVQV------DLKFPPKPIVSSAAKDLISQMLVKD 253
G++ E + G PP+ + + R + + +L+ P K +S+ +D +++ L D
Sbjct: 204 GIMAIEMIEGEPPY---LNENPLRALYLIATNGTPELQNPEK--LSAIFRDFLNRCLEMD 258
Query: 254 SSQRLPLHKLLEHPWI 269
+R +L++H ++
Sbjct: 259 VEKRGSAKELIQHQFL 274
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 134/302 (44%), Gaps = 49/302 (16%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 62
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVAS 124
HPNI++L + + ++YL+ E+ Q K F + A T Y+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLH--------QDLKTFMDASALTGIPLPLIKSYLFQ 114
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLP 181
L + L +CH V+HRD+KP+NLLI +G +K+ADFG + RT TL Y
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 182 PEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP-- 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 234 ----------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
PK P + + L+SQML D ++R+ L HP+
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
Query: 274 DP 275
P
Sbjct: 295 KP 296
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 130/294 (44%), Gaps = 47/294 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ H VA+K L F+S + + RE+ + H++H N++
Sbjct: 25 PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 80
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC ++ + + R L Y H
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQFLIYQILRGLKYIH 138
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPP----KPIVSSAAK----- 243
VDIWS+G + E L G F +H D + I+++ + P K I S +A+
Sbjct: 199 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKISSESARNYIQS 257
Query: 244 ---------------------DLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 258 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 134/304 (44%), Gaps = 55/304 (18%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELN 59
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVASL 125
HPNI++L + + ++YL+ E+ Q K F + A T Y+ L
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEHVH--------QDLKTFMDASALTGIPLPLIKSYLFQL 111
Query: 126 ARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDY 179
+ L +CH V+HRD+KP+NLLI +G +K+ADFG + V T+ TL Y
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWY 168
Query: 180 LPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 234 ------------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
PK P + + L+SQML D ++R+ L HP+
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 272 NADP 275
P
Sbjct: 289 VTKP 292
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 133/254 (52%), Gaps = 12/254 (4%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRRE---VEIQ 70
T+NDF + + +GRG FG VY R+ + + A+K L K +++ Q E E + +
Sbjct: 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 246
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
S P I+ + F+ ++ IL+ G+L+ L + FSE Y A + L
Sbjct: 247 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 131 YCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRR--TMCGTLDYLPPEMVE-S 187
+ H + V++RD+KP N+L+ G ++I+D G + F++++ GT Y+ PE+++
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC-DFSKKKPHASVGTHGYMAPEVLQKG 365
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPF---EAKEHSDTYRRIVQVDLKFPPKPIVSSAAKD 244
V +D++ D +SLG + ++ L G PF + K+ + R + + ++ P S +
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS--FSPELRS 423
Query: 245 LISQMLVKDSSQRL 258
L+ +L +D ++RL
Sbjct: 424 LLEGLLQRDVNRRL 437
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 133/254 (52%), Gaps = 12/254 (4%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRRE---VEIQ 70
T+NDF + + +GRG FG VY R+ + + A+K L K +++ Q E E + +
Sbjct: 186 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 245
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
S P I+ + F+ ++ IL+ G+L+ L + FSE Y A + L
Sbjct: 246 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 305
Query: 131 YCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRR--TMCGTLDYLPPEMVE-S 187
+ H + V++RD+KP N+L+ G ++I+D G + F++++ GT Y+ PE+++
Sbjct: 306 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC-DFSKKKPHASVGTHGYMAPEVLQKG 364
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPF---EAKEHSDTYRRIVQVDLKFPPKPIVSSAAKD 244
V +D++ D +SLG + ++ L G PF + K+ + R + + ++ P S +
Sbjct: 365 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS--FSPELRS 422
Query: 245 LISQMLVKDSSQRL 258
L+ +L +D ++RL
Sbjct: 423 LLEGLLQRDVNRRL 436
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 133/254 (52%), Gaps = 12/254 (4%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRRE---VEIQ 70
T+NDF + + +GRG FG VY R+ + + A+K L K +++ Q E E + +
Sbjct: 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 246
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
S P I+ + F+ ++ IL+ G+L+ L + FSE Y A + L
Sbjct: 247 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 131 YCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRR--TMCGTLDYLPPEMVE-S 187
+ H + V++RD+KP N+L+ G ++I+D G + F++++ GT Y+ PE+++
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC-DFSKKKPHASVGTHGYMAPEVLQKG 365
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPF---EAKEHSDTYRRIVQVDLKFPPKPIVSSAAKD 244
V +D++ D +SLG + ++ L G PF + K+ + R + + ++ P S +
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS--FSPELRS 423
Query: 245 LISQMLVKDSSQRL 258
L+ +L +D ++RL
Sbjct: 424 LLEGLLQRDVNRRL 437
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 133/254 (52%), Gaps = 12/254 (4%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRRE---VEIQ 70
T+NDF + + +GRG FG VY R+ + + A+K L K +++ Q E E + +
Sbjct: 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 246
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
S P I+ + F+ ++ IL+ G+L+ L + FSE Y A + L
Sbjct: 247 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 131 YCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRR--TMCGTLDYLPPEMVE-S 187
+ H + V++RD+KP N+L+ G ++I+D G + F++++ GT Y+ PE+++
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC-DFSKKKPHASVGTHGYMAPEVLQKG 365
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPF---EAKEHSDTYRRIVQVDLKFPPKPIVSSAAKD 244
V +D++ D +SLG + ++ L G PF + K+ + R + + ++ P S +
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS--FSPELRS 423
Query: 245 LISQMLVKDSSQRL 258
L+ +L +D ++RL
Sbjct: 424 LLEGLLQRDVNRRL 437
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 134/302 (44%), Gaps = 49/302 (16%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 62
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVAS 124
HPNI++L + + ++YL+ E+ Q K F + A T Y+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVD--------QDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLP 181
L + L +CH V+HRD+KP+NLLI +G +K+ADFG + RT TL Y
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 182 PEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP-- 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 234 ----------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
PK P + + L+SQML D ++R+ L HP+
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
Query: 274 DP 275
P
Sbjct: 295 KP 296
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 138/299 (46%), Gaps = 48/299 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQ-QSQVEHQLRREVEIQSHLR 74
+DF+ LG G G V+ K S ++A K++ L+ + + +Q+ RE+++
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI---HLEIKPAIRNQIIRELQVLHECN 124
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
P I+ YG FY + + +E+ G L + L+K E+ ++ + L Y
Sbjct: 125 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 184
Query: 135 KH-VIHRDIKPENLLIGAQGELKIADFGWSVHTFNRR-RTMCGTLDYLPPEMVESVEHDA 192
KH ++HRD+KP N+L+ ++GE+K+ DFG S + + GT Y+ PE ++ +
Sbjct: 185 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 244
Query: 193 NVDIWSLGVLCYEFLYG---VPPFEAKEHSDTYRRIVQ---------------------V 228
DIWS+G+ E G +PP +AKE + V+ +
Sbjct: 245 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGM 304
Query: 229 DLKFP-------------PKPIVSSAA-----KDLISQMLVKDSSQRLPLHKLLEHPWI 269
D + P P P + SA +D +++ L+K+ ++R L +L+ H +I
Sbjct: 305 DSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 363
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 110/217 (50%), Gaps = 9/217 (4%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQ-QSQVEHQLRREVEIQSHLR 74
+DF+ LG G G V + + S I+A K++ L+ + + +Q+ RE+++
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLI---HLEIKPAIRNQIIRELQVLHECN 72
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
P I+ YG FY + + +E+ G L + L++ K E ++ R L Y
Sbjct: 73 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLRE 132
Query: 135 KH-VIHRDIKPENLLIGAQGELKIADFGWSVHTFNRR-RTMCGTLDYLPPEMVESVEHDA 192
KH ++HRD+KP N+L+ ++GE+K+ DFG S + + GT Y+ PE ++ +
Sbjct: 133 KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSV 192
Query: 193 NVDIWSLGVLCYEFLYG---VPPFEAKEHSDTYRRIV 226
DIWS+G+ E G +PP +AKE + R V
Sbjct: 193 QSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPV 229
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 137/299 (45%), Gaps = 48/299 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQ-QSQVEHQLRREVEIQSHLR 74
+DF+ LG G G V+ K S ++A K++ L+ + + +Q+ RE+++
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI---HLEIKPAIRNQIIRELQVLHECN 89
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
P I+ YG FY + + +E+ G L + L+K E+ ++ + L Y
Sbjct: 90 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 149
Query: 135 KH-VIHRDIKPENLLIGAQGELKIADFGWSVHTFNRR-RTMCGTLDYLPPEMVESVEHDA 192
KH ++HRD+KP N+L+ ++GE+K+ DFG S + + GT Y+ PE ++ +
Sbjct: 150 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 209
Query: 193 NVDIWSLGVLCYEFLYG---VPPFEAKEHSDTYRRIVQVDL---------------KF-- 232
DIWS+G+ E G +PP +AKE + V+ D KF
Sbjct: 210 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGM 269
Query: 233 -------------------PPK---PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
PPK + S +D +++ L+K+ ++R L +L+ H +I
Sbjct: 270 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 328
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 133/279 (47%), Gaps = 29/279 (10%)
Query: 15 LNDFDIGKPLGR-GKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRR---EVEIQ 70
LN D + +G G FG VY A+ K ++ + A KV+ ++ E +L E++I
Sbjct: 8 LNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVI------DTKSEEELEDYMVEIDIL 61
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYK-ELQKCKYFSERRAATYVASLARAL 129
+ HPNI++L FY + +++++E+ A G + L+ + +E + AL
Sbjct: 62 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 121
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT----FNRRRTMCGTLDYLPPEMV 185
Y H +IHRD+K N+L G++K+ADFG S RR + GT ++ PE+V
Sbjct: 122 NYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVV 181
Query: 186 -----ESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIV-- 238
+ +D D+WSLG+ E PP H R++ K P +
Sbjct: 182 MCETSKDRPYDYKADVWSLGITLIEMAEIEPP----HHELNPMRVLLKIAKSEPPTLAQP 237
Query: 239 ---SSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNAD 274
SS KD + + L K+ R +LL+HP++ +++
Sbjct: 238 SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 276
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 138/304 (45%), Gaps = 55/304 (18%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ +F + +G G +G VY AR K + +VAL + + + V RE+ + L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKI-RLDTETEGVPSTAIREISLLKELN 60
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVASL 125
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQL 112
Query: 126 ARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDY 179
+ L +CH V+HRD+KP+NLLI +G +K+ADFG + V T+ TL Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWY 169
Query: 180 LPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 234 ------------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
PK P + + L+SQML D ++R+ L HP+
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 272 NADP 275
P
Sbjct: 290 VTKP 293
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 138/304 (45%), Gaps = 55/304 (18%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ +F + +G G +G VY AR K + +VAL + + + V RE+ + L
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKI-RLDTETEGVPSTAIREISLLKELN 59
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVASL 125
HPNI++L + + ++YL+ E+ L+++L+K F + A T Y+ L
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKK---FMDASALTGIPLPLIKSYLFQL 111
Query: 126 ARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDY 179
+ L +CH V+HRD+KP+NLLI +G +K+ADFG + V T+ TL Y
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---TLWY 168
Query: 180 LPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 234 ------------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
PK P + + L+SQML D ++R+ L HP+
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 272 NADP 275
P
Sbjct: 289 VTKP 292
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 134/302 (44%), Gaps = 49/302 (16%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 62
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVAS 124
HPNI++L + + ++YL+ E+ + K F + A T Y+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLS--------MDLKDFMDASALTGIPLPLIKSYLFQ 114
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLP 181
L + L +CH V+HRD+KP+NLLI +G +K+ADFG + RT TL Y
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 182 PEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP-- 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 234 ----------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
PK P + + L+SQML D ++R+ L HP+
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
Query: 274 DP 275
P
Sbjct: 295 KP 296
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 134/302 (44%), Gaps = 49/302 (16%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++ +F + +G G +G VY AR K + +VALK + + + V RE+ + L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 61
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---------YVAS 124
HPNI++L + + ++YL+ E+ + K F + A T Y+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLS--------MDLKDFMDASALTGIPLPLIKSYLFQ 113
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM---CGTLDYLP 181
L + L +CH V+HRD+KP+NLLI +G +K+ADFG + RT TL Y
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 182 PEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----DLKFP-- 233
PE++ + + VDIWSLG + E + F D RI + ++ +P
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 234 ----------PK----------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
PK P + + L+SQML D ++R+ L HP+
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
Query: 274 DP 275
P
Sbjct: 294 KP 295
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 130/293 (44%), Gaps = 47/293 (16%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V + + +S +A+K L F+S + + RE+ + H++H N++
Sbjct: 58 PVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 113
Query: 80 RLYGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 114 GLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 171
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 172 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNM 231
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA----------- 241
VDIWS+G + E L G F +H + ++I+++ PP ++S
Sbjct: 232 TVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRL-TGTPPASVISRMPSHEARNYINS 290
Query: 242 -------------------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADP 275
A DL+ +MLV D+ +R+ + L HP+ Q DP
Sbjct: 291 LPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHDP 343
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 119/259 (45%), Gaps = 6/259 (2%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
+ +G G FG VY AR+ R++ +VA+K + S Q ++ + +EV LRHPN ++
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 82 YGYFYDQKRVYLILEYA-AKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHR 140
G + + +L++EY E+ K K E A + L Y H ++IHR
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHR 178
Query: 141 DIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVE---HDANVDIW 197
D+K N+L+ G +K+ DFG S GT ++ PE++ +++ +D VD+W
Sbjct: 179 DVKAGNILLSEPGLVKLGDFG-SASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVW 237
Query: 198 SLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQR 257
SLG+ C E PP I Q + S ++ + L K R
Sbjct: 238 SLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR 297
Query: 258 LPLHKLLEHPWIIQNADPS 276
LL+H ++++ P+
Sbjct: 298 PTSEVLLKHRFVLRERPPT 316
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 6/261 (2%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
+ +G G FG VY AR+ R++ +VA+K + S Q ++ + +EV LRHPN ++
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 82 YGYFYDQKRVYLILEYA-AKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHR 140
G + + +L++EY E+ K K E A + L Y H ++IHR
Sbjct: 81 RGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHR 139
Query: 141 DIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVE---HDANVDIW 197
D+K N+L+ G +K+ DFG S GT ++ PE++ +++ +D VD+W
Sbjct: 140 DVKAGNILLSEPGLVKLGDFG-SASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVW 198
Query: 198 SLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQR 257
SLG+ C E PP I Q + S ++ + L K R
Sbjct: 199 SLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR 258
Query: 258 LPLHKLLEHPWIIQNADPSGV 278
LL+H ++++ P+ +
Sbjct: 259 PTSEVLLKHRFVLRERPPTVI 279
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 9/208 (4%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQ-QSQVEHQLRREVEIQSHLR 74
+DF+ LG G G V+ K S ++A K++ L+ + + +Q+ RE+++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI---HLEIKPAIRNQIIRELQVLHECN 62
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
P I+ YG FY + + +E+ G L + L+K E+ ++ + L Y
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 135 KH-VIHRDIKPENLLIGAQGELKIADFGWSVHTFNRR-RTMCGTLDYLPPEMVESVEHDA 192
KH ++HRD+KP N+L+ ++GE+K+ DFG S + + GT Y+ PE ++ +
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 182
Query: 193 NVDIWSLGVLCYEFLYG---VPPFEAKE 217
DIWS+G+ E G +PP +AKE
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 129/293 (44%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 29 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 84
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ ++ ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQ 202
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 9/208 (4%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQ-QSQVEHQLRREVEIQSHLR 74
+DF+ LG G G V+ K S ++A K++ L+ + + +Q+ RE+++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI---HLEIKPAIRNQIIRELQVLHECN 62
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
P I+ YG FY + + +E+ G L + L+K E+ ++ + L Y
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 135 KH-VIHRDIKPENLLIGAQGELKIADFGWSVHTFNRR-RTMCGTLDYLPPEMVESVEHDA 192
KH ++HRD+KP N+L+ ++GE+K+ DFG S + + GT Y+ PE ++ +
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 182
Query: 193 NVDIWSLGVLCYEFLYG---VPPFEAKE 217
DIWS+G+ E G +PP +AKE
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 133/285 (46%), Gaps = 35/285 (12%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G G +G V+ A+ + ++ IVALK + + V RE+ + L+H NI+RL+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARALIYCHGKHVIHRDI 142
+ K++ L+ E+ + +L K C +++ L + L +CH ++V+HRD+
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDL 127
Query: 143 KPENLLIGAQGELKIADFGWSVHTFNRRRTMCG---TLDYLPPEMVESVE-HDANVDIWS 198
KP+NLLI GELK+ADFG + R TL Y PP+++ + + ++D+WS
Sbjct: 128 KPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS 187
Query: 199 LGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV----------------DLKFPPK------ 235
G + E P F + D +RI ++ D K P
Sbjct: 188 AGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTS 247
Query: 236 -----PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADP 275
P +++ +DL+ +L + QR+ + L+HP+ P
Sbjct: 248 LVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 9/208 (4%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQ-QSQVEHQLRREVEIQSHLR 74
+DF+ LG G G V+ K S ++A K++ L+ + + +Q+ RE+++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI---HLEIKPAIRNQIIRELQVLHECN 62
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
P I+ YG FY + + +E+ G L + L+K E+ ++ + L Y
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 135 KH-VIHRDIKPENLLIGAQGELKIADFGWSVHTFNRR-RTMCGTLDYLPPEMVESVEHDA 192
KH ++HRD+KP N+L+ ++GE+K+ DFG S + + GT Y+ PE ++ +
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 182
Query: 193 NVDIWSLGVLCYEFLYG---VPPFEAKE 217
DIWS+G+ E G +PP +AKE
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 9/208 (4%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQ-QSQVEHQLRREVEIQSHLR 74
+DF+ LG G G V+ K S ++A K++ L+ + + +Q+ RE+++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI---HLEIKPAIRNQIIRELQVLHECN 62
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
P I+ YG FY + + +E+ G L + L+K E+ ++ + L Y
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 135 KH-VIHRDIKPENLLIGAQGELKIADFGWSVHTFNRR-RTMCGTLDYLPPEMVESVEHDA 192
KH ++HRD+KP N+L+ ++GE+K+ DFG S + + GT Y+ PE ++ +
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 182
Query: 193 NVDIWSLGVLCYEFLYG---VPPFEAKE 217
DIWS+G+ E G +PP +AKE
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 126/289 (43%), Gaps = 39/289 (13%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLY 82
P+G G +G V A + ++ VA+K L K Q + RE+ + H++H N++ L
Sbjct: 41 PVGSGAYGSVCAAFDTKTGLRVAVKKLSKP-FQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 83 GYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH 136
F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 157
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDANVD 195
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++ VD
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 217
Query: 196 IWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DLKFP 233
IWS+G + E L G F +H D + I+++ L
Sbjct: 218 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 277
Query: 234 PKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADP 275
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 278 PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 326
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 35/285 (12%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G G +G V+ A+ + ++ IVALK + + V RE+ + L+H NI+RL+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARALIYCHGKHVIHRDI 142
+ K++ L+ E+ + +L K C +++ L + L +CH ++V+HRD+
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDL 127
Query: 143 KPENLLIGAQGELKIADFGWSVHTFNRRRTMCG---TLDYLPPEMVESVE-HDANVDIWS 198
KP+NLLI GELK+A+FG + R TL Y PP+++ + + ++D+WS
Sbjct: 128 KPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS 187
Query: 199 LGVLCYEFL-YGVPPFEAKEHSDTYRRIVQV----------------DLKFPPK------ 235
G + E G P F + D +RI ++ D K P
Sbjct: 188 AGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTS 247
Query: 236 -----PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADP 275
P +++ +DL+ +L + QR+ + L+HP+ P
Sbjct: 248 LVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 128/292 (43%), Gaps = 45/292 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 35 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 90
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 149 SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 209 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 268
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADP 275
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 269 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 320
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 128/292 (43%), Gaps = 45/292 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 31 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 86
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 145 SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 205 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 264
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADP 275
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 265 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 316
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 36 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 91
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 210 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 269
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 270 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 322
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 127/292 (43%), Gaps = 43/292 (14%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLR--REVEIQSHLRHPNIL 79
+P+G G +G V A + R VA+K L S+ QS + H R RE+ + HL+H N++
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKL--SRPFQSLI-HARRTYRELRLLKHLKHENVI 90
Query: 80 RLYGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F D VYL+ G + K + S+ V L R L Y H
Sbjct: 91 GLLDVFTPATSIEDFSEVYLVT--TLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH 148
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP N+ + EL+I DFG + T Y PE M+ + ++
Sbjct: 149 SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV--------------------DLKF 232
VDIWS+G + E L G F ++ D +RI++V
Sbjct: 209 TVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSL 268
Query: 233 PPKP------IVSSA---AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADP 275
PP P I A A DL+ +MLV DS QR+ + L H + Q DP
Sbjct: 269 PPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDP 320
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 36 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 91
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 210 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 269
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 270 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 322
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 128/292 (43%), Gaps = 45/292 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 36 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 91
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 210 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 269
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADP 275
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 270 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 321
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 34 PIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 89
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 208 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 267
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 268 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 320
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 29 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 84
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYNQ 202
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 130/294 (44%), Gaps = 47/294 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 40 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 95
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 96 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 153
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 154 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 213
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPP----KPIVSSAAK----- 243
VDIWS+G + E L G F +H D + I+++ + P K I S +A+
Sbjct: 214 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKISSESARNYIQS 272
Query: 244 ---------------------DLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 273 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 326
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 40 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 95
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 96 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 153
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 154 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 213
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 214 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 273
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 274 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 326
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 49 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 104
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 105 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 222
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 223 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 282
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 283 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 335
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 130/293 (44%), Gaps = 47/293 (16%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 41 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 96
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 97 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPP----KPIVSSAAK----- 243
VDIWS+G + E L G F +H D + I+++ + P K I S +A+
Sbjct: 215 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKISSESARNYIQS 273
Query: 244 ---------------------DLISQMLVKDSSQRLPLHKLLEHPWIIQNADP 275
DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 274 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 326
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 130/293 (44%), Gaps = 47/293 (16%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 41 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 96
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 97 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPP----KPIVSSAAK----- 243
VDIWS+G + E L G F +H D + I+++ + P K I S +A+
Sbjct: 215 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKISSESARNYIQS 273
Query: 244 ---------------------DLISQMLVKDSSQRLPLHKLLEHPWIIQNADP 275
DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 274 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 326
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 34 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 89
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 148 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 208 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 267
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 268 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 320
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 128/292 (43%), Gaps = 45/292 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 52 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 107
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 108 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 165
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 166 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQ 225
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 226 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 285
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADP 275
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 286 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 337
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 29 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 84
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 36 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 91
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 210 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 269
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 270 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 322
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 34 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 89
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 208 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 267
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 268 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 320
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 29 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 84
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 29 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 84
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 31 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 86
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 205 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 264
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 265 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 317
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 35 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 90
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 209 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 268
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 269 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 321
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ H VA+K L F+S + + RE+ + H++H N++
Sbjct: 29 PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 84
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DF + HT + T Y PE M+ + ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 26 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 81
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 82 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 139
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 140 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 199
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 200 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 259
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 260 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 312
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 29 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 84
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 48 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 103
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 104 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 161
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 162 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 221
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 222 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 281
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 282 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 334
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 34 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 89
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 148 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 208 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 267
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 268 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 320
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 28 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 83
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 84 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 141
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 142 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 201
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 202 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 261
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 262 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 314
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 29 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 84
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 52 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 107
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 108 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 165
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 166 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 225
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 226 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 285
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 286 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 338
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 29 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 84
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 29 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 84
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 31 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 86
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 205 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 264
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 265 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 317
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 26 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 81
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 82 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 139
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 140 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 199
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 200 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 259
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 260 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 312
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 27 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 82
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 83 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 140
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 141 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 200
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 201 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 260
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 261 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 313
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 25 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 80
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 199 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 258
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 259 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 35 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 90
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 209 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 268
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 269 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 321
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 31 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 86
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 205 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 264
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 265 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 317
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 105/198 (53%), Gaps = 11/198 (5%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
D +I + +G G FG V+ A S+ VA+K+L + +V ++ REV I LRHP
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSD--VAVKILMEQDFHAERV-NEFLREVAIMKRLRHP 94
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKC---KYFSERRAATYVASLARALIYCH 133
NI+ G + ++ EY ++G LY+ L K + ERR + +A+ + Y H
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 134 GKH--VIHRDIKPENLLIGAQGELKIADFGWS---VHTFNRRRTMCGTLDYLPPEMVESV 188
++ ++HR++K NLL+ + +K+ DFG S TF ++ GT +++ PE++
Sbjct: 155 NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 189 EHDANVDIWSLGVLCYEF 206
+ D++S GV+ +E
Sbjct: 215 PSNEKSDVYSFGVILWEL 232
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 125/285 (43%), Gaps = 41/285 (14%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
+P+G G +G V A + R+ VA+K L++ Q + RE+ + H+RH N++ L
Sbjct: 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRP-FQSELFAKRAYRELRLLKHMRHENVIGL 89
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F D YL++ + G +L K + E R V + + L Y H
Sbjct: 90 LDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA 147
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVES-VEHDANV 194
+IHRD+KP NL + ELKI DFG + + T Y PE++ + + + V
Sbjct: 148 GIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQTV 207
Query: 195 DIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIV---------------- 238
DIWS+G + E + G F+ +H D + I++V PP V
Sbjct: 208 DIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKV-TGTPPAEFVQRLQSDEAKNYMKGLP 266
Query: 239 --------------SSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
S A +L+ +MLV D+ QR+ + L HP+
Sbjct: 267 ELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 103 bits (258), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 130/293 (44%), Gaps = 55/293 (18%)
Query: 20 IGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
IGK +G G +G V+ R + + IVA+K +S+ ++ RE+ + L+HPN++
Sbjct: 8 IGK-IGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLKHPNLV 65
Query: 80 RLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIH 139
L F ++R++L+ EY L++ + + E + +A+ +CH + IH
Sbjct: 66 NLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIH 125
Query: 140 RDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYL-----------PPEMVESV 188
RD+KPEN+LI +K+ DFG++ R + G DY P +V
Sbjct: 126 RDVKPENILITKHSVIKLCDFGFA-------RLLTGPSDYYDDEVATRWYRSPELLVGDT 178
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ--------------------- 227
++ VD+W++G + E L GVP + K D I +
Sbjct: 179 QYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238
Query: 228 -----------VDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
++LKFP +S A L+ L D ++RL +LL HP+
Sbjct: 239 VKIPDPEDMEPLELKFPN---ISYPALGLLKGCLHMDPTERLTCEQLLHHPYF 288
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 135/288 (46%), Gaps = 43/288 (14%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G G +G VY A++ + IVALK + + + + RE+ + L HPNI+ L
Sbjct: 29 VGEGTYGVVYKAKDSQG-RIVALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARALIYCHGKHVIHRDI 142
+ ++ + L+ E+ K +L K L + K + + Y+ L R + +CH ++HRD+
Sbjct: 87 VIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDL 145
Query: 143 KPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPE-MVESVEHDANVD 195
KP+NLLI + G LK+ADFG + V ++ TL Y P+ ++ S ++ +VD
Sbjct: 146 KPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV---TLWYRAPDVLMGSKKYSTSVD 202
Query: 196 IWSLGVLCYEFLYGVPPFEAKEHSDTY-------------------------RRIVQVDL 230
IWS+G + E + G P F D +R QV
Sbjct: 203 IWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFE 262
Query: 231 KFPPKPIVSSAAK---DLISQMLVKDSSQRLPLHKLLEHPWIIQNADP 275
K P I+ + DL+S ML D ++R+ + HP+ ++ DP
Sbjct: 263 KKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY-FKDLDP 309
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 135/288 (46%), Gaps = 43/288 (14%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G G +G VY A++ + IVALK + + + + RE+ + L HPNI+ L
Sbjct: 29 VGEGTYGVVYKAKDSQG-RIVALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARALIYCHGKHVIHRDI 142
+ ++ + L+ E+ K +L K L + K + + Y+ L R + +CH ++HRD+
Sbjct: 87 VIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDL 145
Query: 143 KPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPE-MVESVEHDANVD 195
KP+NLLI + G LK+ADFG + V ++ TL Y P+ ++ S ++ +VD
Sbjct: 146 KPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV---TLWYRAPDVLMGSKKYSTSVD 202
Query: 196 IWSLGVLCYEFLYGVPPFEAKEHSDTY-------------------------RRIVQVDL 230
IWS+G + E + G P F D +R QV
Sbjct: 203 IWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFE 262
Query: 231 KFPPKPIVSSAAK---DLISQMLVKDSSQRLPLHKLLEHPWIIQNADP 275
K P I+ + DL+S ML D ++R+ + HP+ ++ DP
Sbjct: 263 KKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY-FKDLDP 309
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 29 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 84
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI D+G + HT + T Y PE M+ + ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
D +I + +G G FG V+ A S+ VA+K+L + +V ++ REV I LRHP
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSD--VAVKILMEQDFHAERV-NEFLREVAIMKRLRHP 94
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKC---KYFSERRAATYVASLARALIYCH 133
NI+ G + ++ EY ++G LY+ L K + ERR + +A+ + Y H
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 134 GKH--VIHRDIKPENLLIGAQGELKIADFGWS---VHTFNRRRTMCGTLDYLPPEMVESV 188
++ ++HRD+K NLL+ + +K+ DFG S F + GT +++ PE++
Sbjct: 155 NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 189 EHDANVDIWSLGVLCYEF 206
+ D++S GV+ +E
Sbjct: 215 PSNEKSDVYSFGVILWEL 232
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 127/290 (43%), Gaps = 44/290 (15%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G G +G V A +KRS VA+K L + Q + RE+ + H++H N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRP-FQSEIFAKRAYRELLLLKHMQHENVIGLLD 108
Query: 84 YFYDQKRV------YLILEYAAKGELYKELQKCK--YFSERRAATYVASLARALIYCHGK 135
F + YL++ + + +LQK FSE + V + + L Y H
Sbjct: 109 VFTPASSLRNFYDFYLVMPF-----MQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA 163
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEH-DANV 194
V+HRD+KP NL + ELKI DFG + H T Y PE++ S H + V
Sbjct: 164 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTV 223
Query: 195 DIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DLKF 232
DIWS+G + E L G F+ K++ D +I++V L
Sbjct: 224 DIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQ 283
Query: 233 PPK-------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADP 275
P+ P S A DL+ +ML D +RL + L HP+ DP
Sbjct: 284 TPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDP 333
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 127/290 (43%), Gaps = 44/290 (15%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G G +G V A +KRS VA+K L + Q + RE+ + H++H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRP-FQSEIFAKRAYRELLLLKHMQHENVIGLLD 90
Query: 84 YFYDQKRV------YLILEYAAKGELYKELQKCK--YFSERRAATYVASLARALIYCHGK 135
F + YL++ + + +LQK FSE + V + + L Y H
Sbjct: 91 VFTPASSLRNFYDFYLVMPF-----MQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA 145
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEH-DANV 194
V+HRD+KP NL + ELKI DFG + H T Y PE++ S H + V
Sbjct: 146 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTV 205
Query: 195 DIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DLKF 232
DIWS+G + E L G F+ K++ D +I++V L
Sbjct: 206 DIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQ 265
Query: 233 PPK-------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADP 275
P+ P S A DL+ +ML D +RL + L HP+ DP
Sbjct: 266 TPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDP 315
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 127/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 29 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 84
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI FG + HT + T Y PE M+ + ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 130/267 (48%), Gaps = 15/267 (5%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
+ND + +G G G V+ R +++ H++A+K + +S ++ + +V ++SH
Sbjct: 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSH-D 82
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKG--ELYKELQKCKYFSERRAATYVASLARALIYC 132
P I++ +G F V++ +E +L K +Q ER ++ +AL Y
Sbjct: 83 CPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQG--PIPERILGKMTVAIVKALYYL 140
Query: 133 HGKH-VIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT--MCGTLDYLPPEMVE--- 186
KH VIHRD+KP N+L+ +G++K+ DFG S + + G Y+ PE ++
Sbjct: 141 KEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPD 200
Query: 187 --SVEHDANVDIWSLGVLCYEFLYGVPPFE-AKEHSDTYRRIVQVDLKFPPKPI-VSSAA 242
++D D+WSLG+ E G P++ K + +++Q + P + S
Sbjct: 201 PTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDF 260
Query: 243 KDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ + L KD +R +KLLEH +I
Sbjct: 261 QSFVKDCLTKDHRKRPKYNKLLEHSFI 287
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 116/260 (44%), Gaps = 12/260 (4%)
Query: 7 AKEKKRWTLN--DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLR 64
A K +W LN D +G+ +GRG FG V+ R + N +VA+K ++ ++ +
Sbjct: 103 AVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFL 160
Query: 65 REVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQ-KCKYFSERRAATYVA 123
+E I HPNI+RL G ++ +Y+++E G+ L+ + + V
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVG 220
Query: 124 SLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLP-- 181
A + Y K IHRD+ N L+ + LKI+DFG S + G L +P
Sbjct: 221 DAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVK 280
Query: 182 ---PEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI 237
PE + + + D+WS G+L +E F G P+ + T R V+ + P +
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT-REFVEKGGRLPCPEL 339
Query: 238 VSSAAKDLISQMLVKDSSQR 257
A L+ Q + QR
Sbjct: 340 CPDAVFRLMEQCWAYEPGQR 359
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 127/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 29 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 84
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI D G + HT + T Y PE M+ + ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 116/260 (44%), Gaps = 12/260 (4%)
Query: 7 AKEKKRWTLN--DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLR 64
A K +W LN D +G+ +GRG FG V+ R + N +VA+K ++ ++ +
Sbjct: 103 AVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFL 160
Query: 65 REVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQ-KCKYFSERRAATYVA 123
+E I HPNI+RL G ++ +Y+++E G+ L+ + + V
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVG 220
Query: 124 SLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLP-- 181
A + Y K IHRD+ N L+ + LKI+DFG S + G L +P
Sbjct: 221 DAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVK 280
Query: 182 ---PEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI 237
PE + + + D+WS G+L +E F G P+ + T R V+ + P +
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT-REFVEKGGRLPCPEL 339
Query: 238 VSSAAKDLISQMLVKDSSQR 257
A L+ Q + QR
Sbjct: 340 CPDAVFRLMEQCWAYEPGQR 359
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 127/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 29 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 84
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI D G + HT + T Y PE M+ + ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 127/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 29 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 84
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + KC+ ++ + + R L Y H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI D G + HT + T Y PE M+ + ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 129/286 (45%), Gaps = 39/286 (13%)
Query: 13 WTLN--DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W++N D+++ + +G G V A VA+K + + Q S E L +E++
Sbjct: 10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDE--LLKEIQAM 67
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELY--------KELQKCKYFSERRAATYV 122
S HPNI+ Y F + ++L+++ + G + K K E AT +
Sbjct: 68 SQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATIL 127
Query: 123 ASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVH-------TFNR-RRTMC 174
+ L Y H IHRD+K N+L+G G ++IADFG S T N+ R+T
Sbjct: 128 REVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 187
Query: 175 GTLDYLPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
GT ++ PE++E V +D DIWS G+ E G P+ H +++ + L+
Sbjct: 188 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY----HKYPPMKVLMLTLQND 243
Query: 234 PKPIVSSAAKD-------------LISQMLVKDSSQRLPLHKLLEH 266
P P + + +D +IS L KD +R +LL H
Sbjct: 244 P-PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 126/292 (43%), Gaps = 45/292 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 29 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 84
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + K + ++ + + R L Y H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH 142
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG HT + T Y PE M+ + ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADP 275
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 129/286 (45%), Gaps = 39/286 (13%)
Query: 13 WTLN--DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W++N D+++ + +G G V A VA+K + + Q S E L +E++
Sbjct: 5 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDE--LLKEIQAM 62
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELY--------KELQKCKYFSERRAATYV 122
S HPNI+ Y F + ++L+++ + G + K K E AT +
Sbjct: 63 SQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATIL 122
Query: 123 ASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVH-------TFNR-RRTMC 174
+ L Y H IHRD+K N+L+G G ++IADFG S T N+ R+T
Sbjct: 123 REVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 182
Query: 175 GTLDYLPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
GT ++ PE++E V +D DIWS G+ E G P+ H +++ + L+
Sbjct: 183 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY----HKYPPMKVLMLTLQND 238
Query: 234 PKPIVSSAAKD-------------LISQMLVKDSSQRLPLHKLLEH 266
P P + + +D +IS L KD +R +LL H
Sbjct: 239 P-PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 283
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 130/275 (47%), Gaps = 17/275 (6%)
Query: 15 LNDFDIGKPLGRGKFGHV--YLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSH 72
+ + +G LG G +G V L E V + K + + E +++E+++
Sbjct: 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNG-EANVKKEIQLLRR 62
Query: 73 LRHPNILRLYGYFYDQ--KRVYLILEYAAKG--ELYKELQKCKYFSERRAATYVASLARA 128
LRH N+++L Y++ +++Y+++EY G E+ + + K F +A Y L
Sbjct: 63 LRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPE-KRFPVCQAHGYFCQLIDG 121
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGW--SVHTF---NRRRTMCGTLDYLPPE 183
L Y H + ++H+DIKP NLL+ G LKI+ G ++H F + RT G+ + PPE
Sbjct: 122 LEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE 181
Query: 184 MVESVEHDAN--VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA 241
+ ++ + VDIWS GV Y G+ PFE + I + P
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGD--CGPP 239
Query: 242 AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
DL+ ML + ++R + ++ +H W + P+
Sbjct: 240 LSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPA 274
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 127/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 29 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 84
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + K + ++ + + R L Y H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH 142
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 127/293 (43%), Gaps = 45/293 (15%)
Query: 23 PLGRGKFGHVYLAREKRSNHIVALKVL---FKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
P+G G +G V A + ++ VA+K L F+S + + RE+ + H++H N++
Sbjct: 29 PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT----YRELRLLKHMKHENVI 84
Query: 80 RLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
L F + VYL+ G + K + ++ + + R L Y H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH 142
Query: 134 GKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPE-MVESVEHDA 192
+IHRD+KP NL + ELKI DFG + HT + T Y PE M+ + ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV----------------------DL 230
VDIWS+G + E L G F +H D + I+++ L
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 231 KFPPKPIVSSA-------AKDLISQMLVKDSSQRLPLHKLLEHPWIIQNADPS 276
PK ++ A DL+ +MLV DS +R+ + L H + Q DP
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 17/217 (7%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG G +G VY A + +N VA+K + + + ++ V REV + L+H NI+ L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRI-RLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ R++LI EYA + +L K + K S R +++ L + +CH + +HRD+K
Sbjct: 101 VIHHNHRLHLIFEYA-ENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLK 159
Query: 144 PENLLIGAQGE-----LKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVESVEH-D 191
P+NLL+ LKI DFG + + F TL Y PPE++ H
Sbjct: 160 PQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHE---IITLWYRPPEILLGSRHYS 216
Query: 192 ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV 228
+VDIWS+ + E L P F D +I +V
Sbjct: 217 TSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEV 253
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 139/308 (45%), Gaps = 49/308 (15%)
Query: 7 AKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ-------- 58
KEK ++ +ND+ I + L +GKF + L ++ N ALK KS L++ +
Sbjct: 23 VKEKDKY-INDYRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNND 79
Query: 59 ------VEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY 112
+ E++I + +++ L G + VY+I EY + K + +
Sbjct: 80 KISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILK-FDEYFF 138
Query: 113 FSERRAATYV---------ASLARALIYCHG-KHVIHRDIKPENLLIGAQGELKIADFGW 162
++ ++ S+ + Y H K++ HRD+KP N+L+ G +K++DFG
Sbjct: 139 VLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGE 198
Query: 163 SVHTFNRR-RTMCGTLDYLPPEMV--ESVEHDANVDIWSLGVLCYEFLYGVPPFEAK-EH 218
S + +++ + GT +++PPE ES + A VDIWSLG+ Y Y V PF K
Sbjct: 199 SEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL 258
Query: 219 SDTYRRIVQVDLKFP-----------------PKPIVSSAAKDLISQMLVKDSSQRLPLH 261
+ + I ++++P +S+ D + L K+ ++R+
Sbjct: 259 VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSE 318
Query: 262 KLLEHPWI 269
L+H W+
Sbjct: 319 DALKHEWL 326
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 131/257 (50%), Gaps = 17/257 (6%)
Query: 13 WTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSH 72
W L DF + LGRG FG V+ + K + + A K L K +L++ + E +I +
Sbjct: 186 WFL-DFRV---LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 73 LRHPNILRLYGYFYDQKRVYLILEYAAKGEL----YKELQKCKYFSERRAATYVASLARA 128
+ I+ L F + + L++ G++ Y + F E RA Y A +
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVH---TFNRRRTMCGTLDYLPPEMV 185
L + H +++I+RD+KPEN+L+ G ++I+D G +V + + GT ++ PE++
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 186 ESVEHDANVDIWSLGVLCYEFLYGVPPFEAK----EHSDTYRRIVQVDLKFPPKPIVSSA 241
E+D +VD ++LGV YE + PF A+ E+ + +R+++ + +P K S A
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK--FSPA 419
Query: 242 AKDLISQMLVKDSSQRL 258
+KD +L KD +RL
Sbjct: 420 SKDFCEALLQKDPEKRL 436
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 131/257 (50%), Gaps = 17/257 (6%)
Query: 13 WTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSH 72
W L DF + LGRG FG V+ + K + + A K L K +L++ + E +I +
Sbjct: 186 WFL-DFRV---LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 73 LRHPNILRLYGYFYDQKRVYLILEYAAKGEL----YKELQKCKYFSERRAATYVASLARA 128
+ I+ L F + + L++ G++ Y + F E RA Y A +
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVH---TFNRRRTMCGTLDYLPPEMV 185
L + H +++I+RD+KPEN+L+ G ++I+D G +V + + GT ++ PE++
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 186 ESVEHDANVDIWSLGVLCYEFLYGVPPFEAK----EHSDTYRRIVQVDLKFPPKPIVSSA 241
E+D +VD ++LGV YE + PF A+ E+ + +R+++ + +P K S A
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK--FSPA 419
Query: 242 AKDLISQMLVKDSSQRL 258
+KD +L KD +RL
Sbjct: 420 SKDFCEALLQKDPEKRL 436
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 131/257 (50%), Gaps = 17/257 (6%)
Query: 13 WTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSH 72
W L DF + LGRG FG V+ + K + + A K L K +L++ + E +I +
Sbjct: 186 WFL-DFRV---LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 73 LRHPNILRLYGYFYDQKRVYLILEYAAKGEL----YKELQKCKYFSERRAATYVASLARA 128
+ I+ L F + + L++ G++ Y + F E RA Y A +
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVH---TFNRRRTMCGTLDYLPPEMV 185
L + H +++I+RD+KPEN+L+ G ++I+D G +V + + GT ++ PE++
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 186 ESVEHDANVDIWSLGVLCYEFLYGVPPFEAK----EHSDTYRRIVQVDLKFPPKPIVSSA 241
E+D +VD ++LGV YE + PF A+ E+ + +R+++ + +P K S A
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK--FSPA 419
Query: 242 AKDLISQMLVKDSSQRL 258
+KD +L KD +RL
Sbjct: 420 SKDFCEALLQKDPEKRL 436
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 131/257 (50%), Gaps = 17/257 (6%)
Query: 13 WTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSH 72
W L DF + LGRG FG V+ + K + + A K L K +L++ + E +I +
Sbjct: 186 WFL-DFRV---LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 73 LRHPNILRLYGYFYDQKRVYLILEYAAKGEL----YKELQKCKYFSERRAATYVASLARA 128
+ I+ L F + + L++ G++ Y + F E RA Y A +
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVH---TFNRRRTMCGTLDYLPPEMV 185
L + H +++I+RD+KPEN+L+ G ++I+D G +V + + GT ++ PE++
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 186 ESVEHDANVDIWSLGVLCYEFLYGVPPFEAK----EHSDTYRRIVQVDLKFPPKPIVSSA 241
E+D +VD ++LGV YE + PF A+ E+ + +R+++ + +P K S A
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK--FSPA 419
Query: 242 AKDLISQMLVKDSSQRL 258
+KD +L KD +RL
Sbjct: 420 SKDFCEALLQKDPEKRL 436
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 127/269 (47%), Gaps = 19/269 (7%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQ-LQQSQVEHQLRREVEIQSHLR- 74
++ +G LG+G FG V+ VA+KV+ +++ L S + + +E+ +
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 75 -----HPNILRLYGYFYDQKRVYLILEYAAKG-ELYKELQKCKYFSERRAATYVASLARA 128
HP ++RL +F Q+ L+LE +L+ + + E + + + A
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA 151
Query: 129 LIYCHGKHVIHRDIKPENLLIGA-QGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVE 186
+ +CH + V+HRDIK EN+LI +G K+ DFG + T GT Y PPE +
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWIS 211
Query: 187 SVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDL 245
+ H +WSLG+L Y+ + G PFE + I++ +L FP VS L
Sbjct: 212 RHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFPAH--VSPDCCAL 263
Query: 246 ISQMLVKDSSQRLPLHKLLEHPWIIQNAD 274
I + L S R L ++L PW+ A+
Sbjct: 264 IRRCLAPKPSSRPSLEEILLDPWMQTPAE 292
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 118/252 (46%), Gaps = 15/252 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G +G VY R+ + +A+K + + + SQ H+ E+ + HL+H NI++ G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHE---EIALHKHLKHKNIVQYLG 72
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYF----SERRAATYVASLARALIYCHGKHVIH 139
F + + + +E G L L + K+ +E+ Y + L Y H ++H
Sbjct: 73 SFSENGFIKIFMEQVPGGSL-SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 131
Query: 140 RDIKPENLLIGA-QGELKIADFGWS--VHTFNR-RRTMCGTLDYLPPEMVESVE--HDAN 193
RDIK +N+LI G LKI+DFG S + N T GTL Y+ PE+++ +
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKA 191
Query: 194 VDIWSLGVLCYEFLYGVPPF-EAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVK 252
DIWSLG E G PPF E E ++ + +S+ AK I +
Sbjct: 192 ADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEP 251
Query: 253 DSSQRLPLHKLL 264
D +R + LL
Sbjct: 252 DPDKRACANDLL 263
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 14/200 (7%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G +G VY R+ + +A+K + + + SQ H+ E+ + HL+H NI++ G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHE---EIALHKHLKHKNIVQYLG 86
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYF----SERRAATYVASLARALIYCHGKHVIH 139
F + + + +E G L L + K+ +E+ Y + L Y H ++H
Sbjct: 87 SFSENGFIKIFMEQVPGGSL-SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 140 RDIKPENLLIGA-QGELKIADFGWS--VHTFNR-RRTMCGTLDYLPPEMVESVE--HDAN 193
RDIK +N+LI G LKI+DFG S + N T GTL Y+ PE+++ +
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKA 205
Query: 194 VDIWSLGVLCYEFLYGVPPF 213
DIWSLG E G PPF
Sbjct: 206 ADIWSLGCTIIEMATGKPPF 225
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 138/315 (43%), Gaps = 53/315 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+DF + LG G +G V A K + IVA+K + + + RE++I H +H
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKHFKH 68
Query: 76 PNILRLYGY-----FYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
NI+ ++ F + VY+I E + +L++ + + S+ ++ RA+
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVIS-TQMLSDDHIQYFIYQTLRAVK 126
Query: 131 YCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-----VHTFNRRRT--MCGTLDYL--- 180
HG +VIHRD+KP NLLI + +LK+ DFG + N T G +Y+
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATR 186
Query: 181 ----PPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKE---------------HSDT 221
P M+ S ++ +D+WS G + E P F ++ HSD
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246
Query: 222 YRRIVQVDLK---------FPPKPI------VSSAAKDLISQMLVKDSSQRLPLHKLLEH 266
R ++ +P P+ V+ DL+ +MLV D ++R+ + LEH
Sbjct: 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306
Query: 267 PWIIQNADPSGVYRG 281
P++ DP+ G
Sbjct: 307 PYLQTYHDPNDEPEG 321
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 135/305 (44%), Gaps = 49/305 (16%)
Query: 18 FDIGKP------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILL 80
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L KC++ S ++ + R
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKCQHLSNDHICYFLYQILR 139
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 272 NADPS 276
DPS
Sbjct: 320 YYDPS 324
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 139/315 (44%), Gaps = 53/315 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+DF + LG G +G V A K + IVA+K + + + RE++I H +H
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKHFKH 68
Query: 76 PNILRLYGY-----FYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
NI+ ++ F + VY+I E + +L++ + + S+ ++ RA+
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVIS-TQMLSDDHIQYFIYQTLRAVK 126
Query: 131 YCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-----VHTFNRRRT--MCGTLDYL--- 180
HG +VIHRD+KP NLLI + +LK+ DFG + N T G ++++
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATR 186
Query: 181 ----PPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKE---------------HSDT 221
P M+ S ++ +D+WS G + E P F ++ HSD
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246
Query: 222 YRRIVQVDLK---------FPPKPI------VSSAAKDLISQMLVKDSSQRLPLHKLLEH 266
R ++ +P P+ V+ DL+ +MLV D ++R+ + LEH
Sbjct: 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306
Query: 267 PWIIQNADPSGVYRG 281
P++ DP+ G
Sbjct: 307 PYLQTYHDPNDEPEG 321
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 29/263 (11%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
+ ++ + +GRG FG V A+ + + VA+K Q++ E+ S + HP
Sbjct: 10 EIEVEEVVGRGAFGVVCKAKWRAKD--VAIK-----QIESESERKAFIVELRQLSRVNHP 62
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK---YFSERRAATYVASLARALIYCH 133
NI++LYG + V L++EYA G LY L + Y++ A ++ ++ + Y H
Sbjct: 63 NIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 120
Query: 134 G---KHVIHRDIKPENLLIGAQGE-LKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVE 189
K +IHRD+KP NLL+ A G LKI DFG + G+ ++ PE+ E
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSN 180
Query: 190 HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVD-------LKFPPKPIVSSAA 242
+ D++S G++ +E + PF+ + +R + V +K PKPI S
Sbjct: 181 YSEKCDVFSWGIILWEVITRRKPFD-EIGGPAFRIMWAVHNGTRPPLIKNLPKPIES--- 236
Query: 243 KDLISQMLVKDSSQRLPLHKLLE 265
L+++ KD SQR + ++++
Sbjct: 237 --LMTRCWSKDPSQRPSMEEIVK 257
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 137/315 (43%), Gaps = 53/315 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+DF + LG G +G V A K + IVA+K + + + RE++I H +H
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKHFKH 68
Query: 76 PNILRLYGY-----FYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
NI+ ++ F + VY+I E + +L++ + + S+ ++ RA+
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVIS-TQMLSDDHIQYFIYQTLRAVK 126
Query: 131 YCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-----VHTFNRRRT--------MCGTL 177
HG +VIHRD+KP NLLI + +LK+ DFG + N T T
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATR 186
Query: 178 DYLPPE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKE---------------HSDT 221
Y PE M+ S ++ +D+WS G + E P F ++ HSD
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246
Query: 222 YRRIVQVDLK---------FPPKPI------VSSAAKDLISQMLVKDSSQRLPLHKLLEH 266
R ++ +P P+ V+ DL+ +MLV D ++R+ + LEH
Sbjct: 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306
Query: 267 PWIIQNADPSGVYRG 281
P++ DP+ G
Sbjct: 307 PYLQTYHDPNDEPEG 321
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 133/303 (43%), Gaps = 52/303 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 30 KPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VY+++E L + +Q R + + + + + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME--LDHERMSYLLYQMLVGIKHLHSA 145
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+GV+ E + G F +H D + ++++
Sbjct: 206 VDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPK 265
Query: 228 ----------VDLKFPP----KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
D+ FP + +S A+DL+S+MLV D+S+R+ + + L+HP+I
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 274 DPS 276
DPS
Sbjct: 326 DPS 328
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 131/260 (50%), Gaps = 14/260 (5%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
E++ T N F + LG+G FG V + + + + A K L K ++++ + E E +
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGEL----YKELQKCKYFSERRAATYVAS 124
I + ++ L + + + L+L G+L Y Q F E RA Y A
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA--GFPEARAVFYAAE 294
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRR--RTMCGTLDYLPP 182
+ L H + +++RD+KPEN+L+ G ++I+D G +VH + + GT+ Y+ P
Sbjct: 295 ICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAP 354
Query: 183 EMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAK----EHSDTYRRIVQVDLKFPPKPIV 238
E+V++ + + D W+LG L YE + G PF+ + + + R + +V ++ +
Sbjct: 355 EVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSER--F 412
Query: 239 SSAAKDLISQMLVKDSSQRL 258
S A+ L SQ+L KD ++RL
Sbjct: 413 SPQARSLCSQLLCKDPAERL 432
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 29/263 (11%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
+ ++ + +GRG FG V A+ + + VA+K Q++ E+ S + HP
Sbjct: 9 EIEVEEVVGRGAFGVVCKAKWRAKD--VAIK-----QIESESERKAFIVELRQLSRVNHP 61
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK---YFSERRAATYVASLARALIYCH 133
NI++LYG + V L++EYA G LY L + Y++ A ++ ++ + Y H
Sbjct: 62 NIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119
Query: 134 G---KHVIHRDIKPENLLIGAQGE-LKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVE 189
K +IHRD+KP NLL+ A G LKI DFG + G+ ++ PE+ E
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSN 179
Query: 190 HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVD-------LKFPPKPIVSSAA 242
+ D++S G++ +E + PF+ + +R + V +K PKPI S
Sbjct: 180 YSEKCDVFSWGIILWEVITRRKPFD-EIGGPAFRIMWAVHNGTRPPLIKNLPKPIES--- 235
Query: 243 KDLISQMLVKDSSQRLPLHKLLE 265
L+++ KD SQR + ++++
Sbjct: 236 --LMTRCWSKDPSQRPSMEEIVK 256
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 113/223 (50%), Gaps = 13/223 (5%)
Query: 13 WTLN--DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W ++ D K LG G+FG V + R + VA+K++ + S E + E ++
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMI----KEGSMSEDEFIEEAKVM 73
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARAL 129
+L H +++LYG Q+ +++I EY A G L L++ ++ F ++ + A+
Sbjct: 74 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAM 133
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT-MCGT---LDYLPPEMV 185
Y K +HRD+ N L+ QG +K++DFG S + + T G+ + + PPE++
Sbjct: 134 EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVL 193
Query: 186 ESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQ 227
+ + DIW+ GVL +E + G P+E +S+T I Q
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 236
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 130/258 (50%), Gaps = 10/258 (3%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVE 68
E++ T N F + LG+G FG V + + + + A K L K ++++ + E E +
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY--FSERRAATYVASLA 126
I + ++ L + + + L+L G+L + F E RA Y A +
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEIC 296
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRR--RTMCGTLDYLPPEM 184
L H + +++RD+KPEN+L+ G ++I+D G +VH + + GT+ Y+ PE+
Sbjct: 297 CGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV 356
Query: 185 VESVEHDANVDIWSLGVLCYEFLYGVPPFEAK----EHSDTYRRIVQVDLKFPPKPIVSS 240
V++ + + D W+LG L YE + G PF+ + + + R + +V ++ + S
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSER--FSP 414
Query: 241 AAKDLISQMLVKDSSQRL 258
A+ L SQ+L KD ++RL
Sbjct: 415 QARSLCSQLLCKDPAERL 432
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 133/303 (43%), Gaps = 52/303 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VY+++E L + +Q R + + + + + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELDHERMSYLLYQMLVGIKHLHSA 145
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+GV+ E + G F +H D + ++++
Sbjct: 206 VDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPK 265
Query: 228 ----------VDLKFPP----KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
D+ FP + +S A+DL+S+MLV D+S+R+ + + L+HP+I
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 274 DPS 276
DPS
Sbjct: 326 DPS 328
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 113/223 (50%), Gaps = 13/223 (5%)
Query: 13 WTLN--DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W ++ D K LG G+FG V + R + VA+K++ + S E + E ++
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMI----KEGSMSEDEFIEEAKVM 57
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARAL 129
+L H +++LYG Q+ +++I EY A G L L++ ++ F ++ + A+
Sbjct: 58 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAM 117
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT-MCGT---LDYLPPEMV 185
Y K +HRD+ N L+ QG +K++DFG S + + T G+ + + PPE++
Sbjct: 118 EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL 177
Query: 186 ESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQ 227
+ + DIW+ GVL +E + G P+E +S+T I Q
Sbjct: 178 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 220
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 113/223 (50%), Gaps = 13/223 (5%)
Query: 13 WTLN--DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W ++ D K LG G+FG V + R + VA+K++ + S E + E ++
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMI----KEGSMSEDEFIEEAKVM 73
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARAL 129
+L H +++LYG Q+ +++I EY A G L L++ ++ F ++ + A+
Sbjct: 74 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAM 133
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT-MCGT---LDYLPPEMV 185
Y K +HRD+ N L+ QG +K++DFG S + + T G+ + + PPE++
Sbjct: 134 EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL 193
Query: 186 ESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQ 227
+ + DIW+ GVL +E + G P+E +S+T I Q
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 236
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 11/217 (5%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
D K LG G+FG V + R + VA+K++ + S E + E ++ +L H
Sbjct: 10 DLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMI----KEGSMSEDEFIEEAKVMMNLSHE 64
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARALIYCHGK 135
+++LYG Q+ +++I EY A G L L++ ++ F ++ + A+ Y K
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 124
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT-MCGT---LDYLPPEMVESVEHD 191
+HRD+ N L+ QG +K++DFG S + + T G+ + + PPE++ +
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 184
Query: 192 ANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQ 227
+ DIW+ GVL +E + G P+E +S+T I Q
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 221
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 11/217 (5%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
D K LG G+FG V + R + VA+K++ + S E + E ++ +L H
Sbjct: 5 DLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMI----KEGSMSEDEFIEEAKVMMNLSHE 59
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARALIYCHGK 135
+++LYG Q+ +++I EY A G L L++ ++ F ++ + A+ Y K
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 119
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT-MCGT---LDYLPPEMVESVEHD 191
+HRD+ N L+ QG +K++DFG S + + T G+ + + PPE++ +
Sbjct: 120 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 179
Query: 192 ANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQ 227
+ DIW+ GVL +E + G P+E +S+T I Q
Sbjct: 180 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 216
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 113/223 (50%), Gaps = 13/223 (5%)
Query: 13 WTLN--DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W ++ D K LG G+FG V + R + VA+K++ + S E + E ++
Sbjct: 10 WEIDPKDLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMI----KEGSMSEDEFIEEAKVM 64
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARAL 129
+L H +++LYG Q+ +++I EY A G L L++ ++ F ++ + A+
Sbjct: 65 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAM 124
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT-MCGT---LDYLPPEMV 185
Y K +HRD+ N L+ QG +K++DFG S + + T G+ + + PPE++
Sbjct: 125 EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL 184
Query: 186 ESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQ 227
+ + DIW+ GVL +E + G P+E +S+T I Q
Sbjct: 185 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 227
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 113/223 (50%), Gaps = 13/223 (5%)
Query: 13 WTLN--DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W ++ D K LG G+FG V + R + VA+K++ + S E + E ++
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGK-WRGQYDVAIKMI----KEGSMSEDEFIEEAKVM 58
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARAL 129
+L H +++LYG Q+ +++I EY A G L L++ ++ F ++ + A+
Sbjct: 59 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAM 118
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMC-GT---LDYLPPEMV 185
Y K +HRD+ N L+ QG +K++DFG S + + T G+ + + PPE++
Sbjct: 119 EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVL 178
Query: 186 ESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQ 227
+ + DIW+ GVL +E + G P+E +S+T I Q
Sbjct: 179 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 221
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 18 FDIG------KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 21 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILL 78
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L K ++ S ++ + R
Sbjct: 79 AFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLSNDHICYFLYQILR 137
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCG 257
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQ 317
Query: 272 NADPS 276
DPS
Sbjct: 318 YYDPS 322
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 132/313 (42%), Gaps = 72/313 (23%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + VA+K L + Q+ + R V ++ + H NI+ L
Sbjct: 30 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKC-VNHKNIISL 88
Query: 82 YGYFYDQKR------VYLILEYAAKG---ELYKELQKCKYFSERRAATYVASLARALIYC 132
F QK VYL++E ++ EL R + + + + +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMEL------DHERMSYLLYQMLCGIKHL 142
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLP---------PE 183
H +IHRD+KP N+++ + LKI DFG + RT C P PE
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-------RTACTNFMMTPYVVTRYYRAPE 195
Query: 184 MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ---------------- 227
++ + + ANVDIWS+G + E + G F+ +H D + ++++
Sbjct: 196 VILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPT 255
Query: 228 --------------------VDLKFPPKP----IVSSAAKDLISQMLVKDSSQRLPLHKL 263
D FP + I +S A+DL+S+MLV D +R+ + +
Sbjct: 256 VRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEA 315
Query: 264 LEHPWIIQNADPS 276
L HP+I DP+
Sbjct: 316 LRHPYITVWYDPA 328
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 18 FDIGKP------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYXQRTLREIKILL 80
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L K ++ S ++ + R
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLSNDHICYFLYQILR 139
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 272 NADPS 276
DPS
Sbjct: 320 YYDPS 324
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 132/303 (43%), Gaps = 52/303 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VY+++E L + +Q R + + + + + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELDHERMSYLLYQMLVGIKHLHSA 145
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + G F +H D + ++++
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPK 265
Query: 228 ----------VDLKFPP----KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
D+ FP + +S A+DL+S+MLV D+S+R+ + + L+HP+I
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 274 DPS 276
DPS
Sbjct: 326 DPS 328
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 18 FDIG------KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 21 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILL 78
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L K ++ S ++ + R
Sbjct: 79 AFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLSNDHICYFLYQILR 137
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 257
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQ 317
Query: 272 NADPS 276
DPS
Sbjct: 318 YYDPS 322
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 18 FDIGKP------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILL 80
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L K ++ S ++ + R
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLSNDHICYFLYQILR 139
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 199
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 272 NADPS 276
DPS
Sbjct: 320 YYDPS 324
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 18 FDIGKP------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 24 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILL 81
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L K ++ S ++ + R
Sbjct: 82 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLSNDHICYFLYQILR 140
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 141 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 200
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 260
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 261 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
Query: 272 NADPS 276
DPS
Sbjct: 321 YYDPS 325
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 132/303 (43%), Gaps = 52/303 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VY+++E L + +Q R + + + + + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 145
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + G F +H D + ++++
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPK 265
Query: 228 ----------VDLKFPP----KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
D+ FP + +S A+DL+S+MLV D+S+R+ + + L+HP+I
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 274 DPS 276
DPS
Sbjct: 326 DPS 328
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 133/306 (43%), Gaps = 51/306 (16%)
Query: 18 FDIGKP------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 39 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILL 96
Query: 72 HLRHPNILRLYGYFY-----DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLA 126
RH NI+ + K VYL+ + +LYK L K ++ S ++ +
Sbjct: 97 RFRHENIIGINDIIRAPTIEQMKDVYLV-THLMGADLYK-LLKTQHLSNDHICYFLYQIL 154
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYL 180
R L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 181 PPE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 274
Query: 232 ------------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWII 270
P K P S A DL+ +ML + +R+ + + L HP++
Sbjct: 275 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 334
Query: 271 QNADPS 276
Q DPS
Sbjct: 335 QYYDPS 340
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 18 FDIG------KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILL 80
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L K ++ S ++ + R
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLSNDHICYFLYQILR 139
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 272 NADPS 276
DPS
Sbjct: 320 YYDPS 324
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 132/303 (43%), Gaps = 52/303 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VY+++E L + +Q R + + + + + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 145
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + G F +H D + ++++
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPK 265
Query: 228 ----------VDLKFPP----KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
D+ FP + +S A+DL+S+MLV D+S+R+ + + L+HP+I
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 274 DPS 276
DPS
Sbjct: 326 DPS 328
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 18 FDIGKP------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 24 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILL 81
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L K ++ S ++ + R
Sbjct: 82 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLSNDHICYFLYQILR 140
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 141 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 200
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 260
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 261 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
Query: 272 NADPS 276
DPS
Sbjct: 321 YYDPS 325
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 32/267 (11%)
Query: 12 RWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
R L +++ K LG+G +G V+ + ++R+ +VA+K +F + Q S + RE+ I +
Sbjct: 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQNSTDAQRTFREIMILT 63
Query: 72 HLR-HPNILRLYGYFY--DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
L H NI+ L + + VYL+ +Y + +L+ + + V L +
Sbjct: 64 ELSGHENIVNLLNVLRADNDRDVYLVFDYM-ETDLHAVI-RANILEPVHKQYVVYQLIKV 121
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT------------ 176
+ Y H ++HRD+KP N+L+ A+ +K+ADFG S N RR
Sbjct: 122 IKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD 181
Query: 177 ------LDYL-------PPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYR 223
DY+ P ++ S ++ +D+WSLG + E L G P F +
Sbjct: 182 DDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLE 241
Query: 224 RIVQVDLKFPPKPIVSSAAKDLISQML 250
RI+ V + FP V S M+
Sbjct: 242 RIIGV-IDFPSNEDVESIQSPFAKTMI 267
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 18 FDIGKP------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 25 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILL 82
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L K ++ S ++ + R
Sbjct: 83 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLSNDHICYFLYQILR 141
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 142 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 201
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 202 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 261
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 262 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 321
Query: 272 NADPS 276
DPS
Sbjct: 322 YYDPS 326
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 18 FDIGKP------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 16 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILL 73
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L K ++ S ++ + R
Sbjct: 74 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLSNDHICYFLYQILR 132
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 133 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 192
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 193 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 252
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 253 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 312
Query: 272 NADPS 276
DPS
Sbjct: 313 YYDPS 317
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 18 FDIGKP------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILL 80
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L K ++ S ++ + R
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLSNDHICYFLYQILR 139
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 272 NADPS 276
DPS
Sbjct: 320 YYDPS 324
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 18 FDIGKP------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 17 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILL 74
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L K ++ S ++ + R
Sbjct: 75 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLSNDHICYFLYQILR 133
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 134 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCI 253
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 254 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
Query: 272 NADPS 276
DPS
Sbjct: 314 YYDPS 318
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 18 FDIGKP------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 17 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILL 74
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L K ++ S ++ + R
Sbjct: 75 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLSNDHICYFLYQILR 133
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 134 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 253
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 254 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
Query: 272 NADPS 276
DPS
Sbjct: 314 YYDPS 318
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 18 FDIG------KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 27 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILL 84
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L K ++ S ++ + R
Sbjct: 85 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLSNDHICYFLYQILR 143
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 144 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 203
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 204 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 263
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 264 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 323
Query: 272 NADPS 276
DPS
Sbjct: 324 YYDPS 328
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 18 FDIG------KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 19 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILL 76
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L K ++ S ++ + R
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLSNDHICYFLYQILR 135
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 272 NADPS 276
DPS
Sbjct: 316 YYDPS 320
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 18 FDIGKP------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 19 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILL 76
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L K ++ S ++ + R
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLSNDHICYFLYQILR 135
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 272 NADPS 276
DPS
Sbjct: 316 YYDPS 320
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 18 FDIGKP------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 39 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILL 96
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L K ++ S ++ + R
Sbjct: 97 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLSNDHICYFLYQILR 155
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 276 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335
Query: 272 NADPS 276
DPS
Sbjct: 336 YYDPS 340
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 18 FDIG------KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 19 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILL 76
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L K ++ S ++ + R
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLSNDHICYFLYQILR 135
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 272 NADPS 276
DPS
Sbjct: 316 YYDPS 320
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 19/214 (8%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G G +G V R K + IVA+K +S V+ RE+++ LRH N++ L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+KR YL+ E+ L + Y+ + + +CH ++IHRDIK
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIK 151
Query: 144 PENLLIGAQGELKIADFGWSVHTFNRRRTMC----------GTLDYLPPE-MVESVEHDA 192
PEN+L+ G +K+ DFG++ RT+ T Y PE +V V++
Sbjct: 152 PENILVSQSGVVKLCDFGFA-------RTLAAPGEVYDDEVATRWYRAPELLVGDVKYGK 204
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV 226
VD+W++G L E G P F D I+
Sbjct: 205 AVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIM 238
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 18 FDIG------KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 21 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILL 78
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L K ++ S ++ + R
Sbjct: 79 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLSNDHICYFLYQILR 137
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 257
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 317
Query: 272 NADPS 276
DPS
Sbjct: 318 YYDPS 322
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 18 FDIGKP------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 19 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILL 76
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L K ++ S ++ + R
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLSNDHICYFLYQILR 135
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXI 255
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 272 NADPS 276
DPS
Sbjct: 316 YYDPS 320
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 35/226 (15%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG G + VY K + VALK + K ++ +R E+ + L+H NI+RLY
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEV-KLDSEEGTPSTAIR-EISLMKELKHENIVRLYD 70
Query: 84 YFYDQKRVYLILEYAAKGELYK--------------ELQKCKYFSERRAATYVASLARAL 129
+ + ++ L+ E+ +L K EL KYF + L + L
Sbjct: 71 VIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ--------LLQGL 121
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPE 183
+CH ++HRD+KP+NLLI +G+LK+ DFG + V+TF+ TL Y P+
Sbjct: 122 AFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV---TLWYRAPD 178
Query: 184 -MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV 228
++ S + ++DIWS G + E + G P F + + I +
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDI 224
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 132/303 (43%), Gaps = 52/303 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VY+++E L + +Q R + + + + + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 145
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + G F +H D + ++++
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPK 265
Query: 228 ----------VDLKFPP----KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
D+ FP + +S A+DL+S+MLV D+S+R+ + + L+HP+I
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 274 DPS 276
DPS
Sbjct: 326 DPS 328
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 132/303 (43%), Gaps = 52/303 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 89
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VY+++E L + +Q R + + + + + H
Sbjct: 90 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 146
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 147 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 206
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + G F +H D + ++++
Sbjct: 207 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPK 266
Query: 228 ----------VDLKFPP----KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
D+ FP + +S A+DL+S+MLV D+S+R+ + + L+HP+I
Sbjct: 267 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 326
Query: 274 DPS 276
DPS
Sbjct: 327 DPS 329
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 132/303 (43%), Gaps = 52/303 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 32 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 90
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VY+++E L + +Q R + + + + + H
Sbjct: 91 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 147
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 148 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKEN 207
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + G F +H D + ++++
Sbjct: 208 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPK 267
Query: 228 ----------VDLKFPP----KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
D+ FP + +S A+DL+S+MLV D+S+R+ + + L+HP+I
Sbjct: 268 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 327
Query: 274 DPS 276
DPS
Sbjct: 328 DPS 330
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 132/303 (43%), Gaps = 52/303 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VY+++E L + +Q R + + + + + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 145
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYKEN 205
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + G F +H D + ++++
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPK 265
Query: 228 ----------VDLKFPP----KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
D+ FP + +S A+DL+S+MLV D+S+R+ + + L+HP+I
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 274 DPS 276
DPS
Sbjct: 326 DPS 328
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 132/303 (43%), Gaps = 52/303 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VY+++E L + +Q R + + + + + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 145
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + G F +H D + ++++
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPK 265
Query: 228 ----------VDLKFPP----KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
D+ FP + +S A+DL+S+MLV D+S+R+ + + L+HP+I
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 274 DPS 276
DPS
Sbjct: 326 DPS 328
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 132/303 (43%), Gaps = 52/303 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VY+++E L + +Q R + + + + + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 145
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + G F +H D + ++++
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPK 265
Query: 228 ----------VDLKFPP----KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
D+ FP + +S A+DL+S+MLV D+S+R+ + + L+HP+I
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 274 DPS 276
DPS
Sbjct: 326 DPS 328
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 18 FDIGKP------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA+K + S + + RE++I
Sbjct: 19 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILL 76
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L K ++ S ++ + R
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLSNDHICYFLYQILR 135
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXI 255
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 272 NADPS 276
DPS
Sbjct: 316 YYDPS 320
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 18 FDIGKP------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G +G G +G V A + + VA++ + S + + RE++I
Sbjct: 23 FDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKI--SPFEHQTYCQRTLREIKILL 80
Query: 72 HLRHPNILRLYGYF----YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH NI+ + +Q + I++ + +LYK L K ++ S ++ + R
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLSNDHICYFLYQILR 139
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-----MCGTLDYLP 181
L Y H +V+HRD+KP NLL+ +LKI DFG + V + T T Y
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 182 PE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
PE M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + +R+ + + L HP++ Q
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 272 NADPS 276
DPS
Sbjct: 320 YYDPS 324
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 130/305 (42%), Gaps = 49/305 (16%)
Query: 18 FDIG------KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
FD+G + +G G +G V A + VA+K + S + + RE++I
Sbjct: 39 FDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKI--SPFEHQTYCQRTLREIQILL 96
Query: 72 HLRHPNILR----LYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
RH N++ L + R I++ + +LYK L K + S ++ + R
Sbjct: 97 RFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYK-LLKSQQLSNDHICYFLYQILR 155
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSV-------HTFNRRRTMCGTLDYL 180
L Y H +V+HRD+KP NLLI +LKI DFG + HT +
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRA 215
Query: 181 PPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV-------QVDLK-- 231
P M+ S + ++DIWS+G + E L P F K + D I+ Q DL
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 232 -----------FPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
P K P S A DL+ +ML + ++R+ + + L HP++ Q
Sbjct: 276 INMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQ 335
Query: 272 NADPS 276
DP+
Sbjct: 336 YYDPT 340
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 110/244 (45%), Gaps = 32/244 (13%)
Query: 1 ACSEVSAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAR-----EKRSNHIVALKV-LFKS 52
SE E RW L + +GKPLG G FG V LA + + N + + V + KS
Sbjct: 11 GVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS 70
Query: 53 QLQQSQVEHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK 111
+ + L E+E+ + +H NI+ L G +Y+I+EYA+KG L + LQ +
Sbjct: 71 DATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 129
Query: 112 ----------------YFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGEL 155
S + + +AR + Y K IHRD+ N+L+ +
Sbjct: 130 PPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVM 189
Query: 156 KIADFGWSV---HTFNRRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-FLYG 209
KIADFG + H ++T G L ++ PE + + D+WS GVL +E F G
Sbjct: 190 KIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 210 VPPF 213
P+
Sbjct: 250 GSPY 253
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 11/224 (4%)
Query: 11 KRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ--VEHQLRREVE 68
KR+ DF LG G+F VY AR+K +N IVA+K + +++ + RE++
Sbjct: 10 KRYEKLDF-----LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK 64
Query: 69 IQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARA 128
+ L HPNI+ L F + + L+ ++ + Y+ +
Sbjct: 65 LLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQG 124
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT---MCGTLDYLPPEMV 185
L Y H ++HRD+KP NLL+ G LK+ADFG + + R T Y PE++
Sbjct: 125 LEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELL 184
Query: 186 ESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV 228
+ VD+W++G + E L VP D RI +
Sbjct: 185 FGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFET 228
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 131/292 (44%), Gaps = 58/292 (19%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG V+ A+ S+ + KVL + + RE++I ++HPN++ L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKN--------RELQIMRIVKHPNVVDL 97
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAAT-------YVASLARA 128
+FY D+ + L+LEY + +Y+ +++++ + Y+ L R+
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPE-TVYR---ASRHYAKLKQTMPMLLIKLYMYQLLRS 153
Query: 129 LIYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWS---VHTFNRRRTMCGTLDYLPPEM 184
L Y H + HRDIKP+NLL+ G LK+ DFG + + +C Y PE+
Sbjct: 154 LAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-YRAPEL 212
Query: 185 V-ESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV--------------- 228
+ + + N+DIWS G + E + G P F + D I++V
Sbjct: 213 IFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPN 272
Query: 229 --DLKFPP----------KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPW 268
+ KFP +P A DLIS++L S RL + L HP+
Sbjct: 273 YMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 129/284 (45%), Gaps = 40/284 (14%)
Query: 24 LGRGKFGHVYLARE-KRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR---HPNIL 79
+G G +G V+ AR+ K VALK + + Q + + REV + HL HPN++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 80 RLYGYFY-----DQKRVYLILEYAAKGELYKELQKCKY--FSERRAATYVASLARALIYC 132
RL+ + ++ L+ E+ + +L L K + L R L +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-MCGTLDYLPPEMVESVEH 190
H V+HRD+KP+N+L+ + G++K+ADFG + +++F T + TL Y PE++ +
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSY 196
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----------DLKFP------ 233
VD+WS+G + E P F D +I+ V D+ P
Sbjct: 197 ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHS 256
Query: 234 --PKPI------VSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+PI + KDL+ + L + ++R+ + L HP+
Sbjct: 257 KSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 129/284 (45%), Gaps = 40/284 (14%)
Query: 24 LGRGKFGHVYLARE-KRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR---HPNIL 79
+G G +G V+ AR+ K VALK + + Q + + REV + HL HPN++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 80 RLYGYFY-----DQKRVYLILEYAAKGELYKELQKCKY--FSERRAATYVASLARALIYC 132
RL+ + ++ L+ E+ + +L L K + L R L +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-MCGTLDYLPPEMVESVEH 190
H V+HRD+KP+N+L+ + G++K+ADFG + +++F T + TL Y PE++ +
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSY 196
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----------DLKFP------ 233
VD+WS+G + E P F D +I+ V D+ P
Sbjct: 197 ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHS 256
Query: 234 --PKPI------VSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+PI + KDL+ + L + ++R+ + L HP+
Sbjct: 257 KSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 129/284 (45%), Gaps = 40/284 (14%)
Query: 24 LGRGKFGHVYLARE-KRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR---HPNIL 79
+G G +G V+ AR+ K VALK + + Q + + REV + HL HPN++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 80 RLYGYFY-----DQKRVYLILEYAAKGELYKELQKCKY--FSERRAATYVASLARALIYC 132
RL+ + ++ L+ E+ + +L L K + L R L +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-MCGTLDYLPPEMVESVEH 190
H V+HRD+KP+N+L+ + G++K+ADFG + +++F T + TL Y PE++ +
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSY 196
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----------DLKFP------ 233
VD+WS+G + E P F D +I+ V D+ P
Sbjct: 197 ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHS 256
Query: 234 --PKPI------VSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+PI + KDL+ + L + ++R+ + L HP+
Sbjct: 257 KSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 113/244 (46%), Gaps = 32/244 (13%)
Query: 1 ACSEVSAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAR-----EKRSNHIVALKV-LFKS 52
SE E RW L + +GKPLG G FG V LA + + N + + V + KS
Sbjct: 11 GVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS 70
Query: 53 QLQQSQVEHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK-- 109
+ + L E+E+ + +H NI+ L G +Y+I+EYA+KG L + LQ
Sbjct: 71 DATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 129
Query: 110 ------C--------KYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGEL 155
C + S + + +AR + Y K IHRD+ N+L+ +
Sbjct: 130 PPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVM 189
Query: 156 KIADFGWS--VHTFN-RRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-FLYG 209
KIADFG + +H + ++T G L ++ PE + + D+WS GVL +E F G
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 210 VPPF 213
P+
Sbjct: 250 GSPY 253
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 15/250 (6%)
Query: 18 FDIGKPLGRGKFGHV----YLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++G+ +G G+FG V Y++ E N +A+ + V + +E
Sbjct: 12 IELGRCIGEGQFGDVHQGIYMSPE---NPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 68
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT-YVASLARALIYC 132
HP+I++L G + V++I+E GEL LQ KY + + Y L+ AL Y
Sbjct: 69 DHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 127
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWSVH----TFNRRRTMCGTLDYLPPEMVESV 188
K +HRDI N+L+ + +K+ DFG S + T+ + + ++ PE +
Sbjct: 128 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 187
Query: 189 EHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
+ D+W GV +E L +GV PF+ +++D RI + + P P L++
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPPNCPPTLYSLMT 246
Query: 248 QMLVKDSSQR 257
+ D S+R
Sbjct: 247 KCWAYDPSRR 256
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 15/250 (6%)
Query: 18 FDIGKPLGRGKFGHV----YLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++G+ +G G+FG V Y++ E N +A+ + V + +E
Sbjct: 17 IELGRCIGEGQFGDVHQGIYMSPE---NPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 73
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT-YVASLARALIYC 132
HP+I++L G + V++I+E GEL LQ KY + + Y L+ AL Y
Sbjct: 74 DHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 132
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWSVH----TFNRRRTMCGTLDYLPPEMVESV 188
K +HRDI N+L+ + +K+ DFG S + T+ + + ++ PE +
Sbjct: 133 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 192
Query: 189 EHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
+ D+W GV +E L +GV PF+ +++D RI + + P P L++
Sbjct: 193 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPPNCPPTLYSLMT 251
Query: 248 QMLVKDSSQR 257
+ D S+R
Sbjct: 252 KCWAYDPSRR 261
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 15/250 (6%)
Query: 18 FDIGKPLGRGKFGHV----YLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++G+ +G G+FG V Y++ E N +A+ + V + +E
Sbjct: 9 IELGRCIGEGQFGDVHQGIYMSPE---NPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 65
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT-YVASLARALIYC 132
HP+I++L G + V++I+E GEL LQ KY + + Y L+ AL Y
Sbjct: 66 DHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 124
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWSVH----TFNRRRTMCGTLDYLPPEMVESV 188
K +HRDI N+L+ + +K+ DFG S + T+ + + ++ PE +
Sbjct: 125 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 184
Query: 189 EHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
+ D+W GV +E L +GV PF+ +++D RI + + P P L++
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPPNCPPTLYSLMT 243
Query: 248 QMLVKDSSQR 257
+ D S+R
Sbjct: 244 KCWAYDPSRR 253
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 112/244 (45%), Gaps = 32/244 (13%)
Query: 1 ACSEVSAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAR-----EKRSNHIVALKV-LFKS 52
SE E RW L + +GKPLG G FG V LA + + N + + V + KS
Sbjct: 4 GVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS 63
Query: 53 QLQQSQVEHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK 111
+ + L E+E+ + +H NI+ L G +Y+I+EYA+KG L + LQ +
Sbjct: 64 DATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 122
Query: 112 ----------------YFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGEL 155
S + + +AR + Y K IHRD+ N+L+ +
Sbjct: 123 PPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVM 182
Query: 156 KIADFGWS--VHTFN-RRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-FLYG 209
KIADFG + +H + ++T G L ++ PE + + D+WS GVL +E F G
Sbjct: 183 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 242
Query: 210 VPPF 213
P+
Sbjct: 243 GSPY 246
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 15/250 (6%)
Query: 18 FDIGKPLGRGKFGHV----YLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++G+ +G G+FG V Y++ E N +A+ + V + +E
Sbjct: 12 IELGRCIGEGQFGDVHQGIYMSPE---NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF 68
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT-YVASLARALIYC 132
HP+I++L G + V++I+E GEL LQ KY + + Y L+ AL Y
Sbjct: 69 DHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 127
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWSVH----TFNRRRTMCGTLDYLPPEMVESV 188
K +HRDI N+L+ + +K+ DFG S + T+ + + ++ PE +
Sbjct: 128 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 187
Query: 189 EHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
+ D+W GV +E L +GV PF+ +++D RI + + P P L++
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPPNCPPTLYSLMT 246
Query: 248 QMLVKDSSQR 257
+ D S+R
Sbjct: 247 KCWAYDPSRR 256
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 15/250 (6%)
Query: 18 FDIGKPLGRGKFGHV----YLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++G+ +G G+FG V Y++ E N +A+ + V + +E
Sbjct: 15 IELGRCIGEGQFGDVHQGIYMSPE---NPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 71
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT-YVASLARALIYC 132
HP+I++L G + V++I+E GEL LQ KY + + Y L+ AL Y
Sbjct: 72 DHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 130
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWSVH----TFNRRRTMCGTLDYLPPEMVESV 188
K +HRDI N+L+ + +K+ DFG S + T+ + + ++ PE +
Sbjct: 131 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 190
Query: 189 EHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
+ D+W GV +E L +GV PF+ +++D RI + + P P L++
Sbjct: 191 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPPNCPPTLYSLMT 249
Query: 248 QMLVKDSSQR 257
+ D S+R
Sbjct: 250 KCWAYDPSRR 259
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 148/325 (45%), Gaps = 60/325 (18%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQ 62
+ +A E+ R ++ F + + G+G FG V L +EK + VA+K + + +++ E Q
Sbjct: 10 AAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNR-ELQ 68
Query: 63 LRREVEIQSHLRHPNILRLYGYFY-----DQKRVYL--ILEYAAKGELYKELQKCKYFSE 115
+ +++ + L HPNI++L YFY D++ +YL ++EY L++ C+ +
Sbjct: 69 IMQDLAV---LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHR---CCRNYYR 121
Query: 116 RRAA-------TYVASLARALIYCH--GKHVIHRDIKPENLLIG-AQGELKIADFGWSVH 165
R+ A ++ L R++ H +V HRDIKP N+L+ A G LK+ DFG +
Sbjct: 122 RQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKK 181
Query: 166 TFNRRRTMCGTLD--YLPPEMVESVEH-DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTY 222
+ Y PE++ +H VDIWS+G + E + G P F +
Sbjct: 182 LSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQL 241
Query: 223 RRIVQVDLKFPPKPIV-------------------------------SSAAKDLISQMLV 251
IV+V L P + ++ + A DL+S +L
Sbjct: 242 HEIVRV-LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQ 300
Query: 252 KDSSQRLPLHKLLEHPWIIQNADPS 276
+R+ ++ L HP+ + DP+
Sbjct: 301 YLPEERMKPYEALCHPYFDELHDPA 325
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 112/244 (45%), Gaps = 32/244 (13%)
Query: 1 ACSEVSAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAR-----EKRSNHIVALKV-LFKS 52
SE E RW L + +GKPLG G FG V LA + + N + + V + KS
Sbjct: 11 GVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS 70
Query: 53 QLQQSQVEHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK 111
+ + L E+E+ + +H NI+ L G +Y+I+EYA+KG L + LQ +
Sbjct: 71 DATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 129
Query: 112 ----------------YFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGEL 155
S + + +AR + Y K IHRD+ N+L+ +
Sbjct: 130 PPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVM 189
Query: 156 KIADFGWS--VHTFN-RRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-FLYG 209
KIADFG + +H + ++T G L ++ PE + + D+WS GVL +E F G
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 210 VPPF 213
P+
Sbjct: 250 GSPY 253
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 15/221 (6%)
Query: 12 RWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W + D + LG G+FG VY K+ + VA+K L + ++ VE L+ E +
Sbjct: 5 KWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLK-EAAV 60
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVAS-LA 126
++HPN+++L G + Y+I E+ G L L++C E A Y+A+ ++
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQIS 119
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT---LDYLPP 182
A+ Y K+ IHRD+ N L+G +K+ADFG S + T + G + + P
Sbjct: 120 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAP 179
Query: 183 EMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTY 222
E + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVY 220
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 15/250 (6%)
Query: 18 FDIGKPLGRGKFGHV----YLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++G+ +G G+FG V Y++ E N +A+ + V + +E
Sbjct: 40 IELGRCIGEGQFGDVHQGIYMSPE---NPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 96
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT-YVASLARALIYC 132
HP+I++L G + V++I+E GEL LQ KY + + Y L+ AL Y
Sbjct: 97 DHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 155
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWSVH----TFNRRRTMCGTLDYLPPEMVESV 188
K +HRDI N+L+ + +K+ DFG S + T+ + + ++ PE +
Sbjct: 156 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 215
Query: 189 EHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
+ D+W GV +E L +GV PF+ +++D RI + + P P L++
Sbjct: 216 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPPNCPPTLYSLMT 274
Query: 248 QMLVKDSSQR 257
+ D S+R
Sbjct: 275 KCWAYDPSRR 284
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 15/250 (6%)
Query: 18 FDIGKPLGRGKFGHV----YLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++G+ +G G+FG V Y++ E N +A+ + V + +E
Sbjct: 14 IELGRCIGEGQFGDVHQGIYMSPE---NPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 70
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT-YVASLARALIYC 132
HP+I++L G + V++I+E GEL LQ KY + + Y L+ AL Y
Sbjct: 71 DHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 129
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWSVH----TFNRRRTMCGTLDYLPPEMVESV 188
K +HRDI N+L+ + +K+ DFG S + T+ + + ++ PE +
Sbjct: 130 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 189
Query: 189 EHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
+ D+W GV +E L +GV PF+ +++D RI + + P P L++
Sbjct: 190 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPPNCPPTLYSLMT 248
Query: 248 QMLVKDSSQR 257
+ D S+R
Sbjct: 249 KCWAYDPSRR 258
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 112/244 (45%), Gaps = 32/244 (13%)
Query: 1 ACSEVSAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAR-----EKRSNHIVALKV-LFKS 52
SE E RW L + +GKPLG G FG V LA + + N + + V + KS
Sbjct: 3 GVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS 62
Query: 53 QLQQSQVEHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK 111
+ + L E+E+ + +H NI+ L G +Y+I+EYA+KG L + LQ +
Sbjct: 63 DATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 121
Query: 112 ----------------YFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGEL 155
S + + +AR + Y K IHRD+ N+L+ +
Sbjct: 122 PPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVM 181
Query: 156 KIADFGWS--VHTFN-RRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-FLYG 209
KIADFG + +H + ++T G L ++ PE + + D+WS GVL +E F G
Sbjct: 182 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 241
Query: 210 VPPF 213
P+
Sbjct: 242 GSPY 245
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 129/307 (42%), Gaps = 60/307 (19%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + VA+K L + Q+ + R V ++ + H NI+ L
Sbjct: 28 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKC-VNHKNIISL 86
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKY----FSERRAATYVASLARALIY 131
F QK VYL++E + C+ R + + + + +
Sbjct: 87 LNVFTPQKTLEEFQDVYLVMELM-------DANLCQVIHMELDHERMSYLLYQMLCGIKH 139
Query: 132 CHGKHVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVE 189
H +IHRD+KP N+++ + LKI DFG + T T Y PE++ +
Sbjct: 140 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMG 199
Query: 190 HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ---------------------- 227
+ NVDIWS+G + E + G F+ +H D + ++++
Sbjct: 200 YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVE 259
Query: 228 --------------VDLKFPPKP----IVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
D FP + I +S A+DL+S+MLV D +R+ + + L HP+I
Sbjct: 260 NRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 319
Query: 270 IQNADPS 276
DP+
Sbjct: 320 TVWYDPA 326
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 112/242 (46%), Gaps = 32/242 (13%)
Query: 3 SEVSAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAR-----EKRSNHIVALKV-LFKSQL 54
SE E RW L + +GKPLG G FG V LA + + N + + V + KS
Sbjct: 2 SEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA 61
Query: 55 QQSQVEHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-- 111
+ + L E+E+ + +H NI+ L G +Y+I+EYA+KG L + LQ +
Sbjct: 62 TEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 120
Query: 112 --------------YFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKI 157
S + + +AR + Y K IHRD+ N+L+ +KI
Sbjct: 121 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKI 180
Query: 158 ADFGWS--VHTFN-RRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVP 211
ADFG + +H + ++T G L ++ PE + + D+WS GVL +E F G
Sbjct: 181 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 240
Query: 212 PF 213
P+
Sbjct: 241 PY 242
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 112/244 (45%), Gaps = 32/244 (13%)
Query: 1 ACSEVSAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAR-----EKRSNHIVALKV-LFKS 52
SE E RW L + +GKPLG G FG V LA + + N + + V + KS
Sbjct: 52 GVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS 111
Query: 53 QLQQSQVEHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK 111
+ + L E+E+ + +H NI+ L G +Y+I+EYA+KG L + LQ +
Sbjct: 112 DATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 170
Query: 112 ----------------YFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGEL 155
S + + +AR + Y K IHRD+ N+L+ +
Sbjct: 171 PPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVM 230
Query: 156 KIADFGWS--VHTFN-RRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-FLYG 209
KIADFG + +H + ++T G L ++ PE + + D+WS GVL +E F G
Sbjct: 231 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 290
Query: 210 VPPF 213
P+
Sbjct: 291 GSPY 294
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 17/251 (6%)
Query: 18 FDIGKPLGRGKFGHV----YLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++G+ +G G+FG V Y++ E N +A+ + V + +E
Sbjct: 12 IELGRCIGEGQFGDVHQGIYMSPE---NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF 68
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVASLARALIY 131
HP+I++L G + V++I+E GEL LQ + FS A+ Y L+ AL Y
Sbjct: 69 DHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAY 126
Query: 132 CHGKHVIHRDIKPENLLIGAQGELKIADFGWSVH----TFNRRRTMCGTLDYLPPEMVES 187
K +HRDI N+L+ A +K+ DFG S + T+ + + ++ PE +
Sbjct: 127 LESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 188 VEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ D+W GV +E L +GV PF+ +++D RI + + P P L+
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPPNCPPTLYSLM 245
Query: 247 SQMLVKDSSQR 257
++ D S+R
Sbjct: 246 TKCWAYDPSRR 256
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 15/222 (6%)
Query: 12 RWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W + D + LG G++G VY K+ + VA+K L + ++ VE L+ E +
Sbjct: 5 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLK-EAAV 60
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVAS-LA 126
++HPN+++L G + Y+I+E+ G L L++C E A Y+A+ ++
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQIS 119
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT---LDYLPP 182
A+ Y K+ IHRD+ N L+G +K+ADFG S + T + G + + P
Sbjct: 120 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAP 179
Query: 183 EMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTYR 223
E + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE 221
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 112/244 (45%), Gaps = 32/244 (13%)
Query: 1 ACSEVSAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAR-----EKRSNHIVALKV-LFKS 52
SE E RW L + +GKPLG G FG V LA + + N + + V + KS
Sbjct: 11 GVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS 70
Query: 53 QLQQSQVEHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK-- 109
+ + L E+E+ + +H NI+ L G +Y+I+EYA+KG L + LQ
Sbjct: 71 DATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARE 129
Query: 110 --------------CKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGEL 155
+ S + + +AR + Y K IHRD+ N+L+ +
Sbjct: 130 PPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVM 189
Query: 156 KIADFGWS--VHTFN-RRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-FLYG 209
KIADFG + +H + ++T G L ++ PE + + D+WS GVL +E F G
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 210 VPPF 213
P+
Sbjct: 250 GSPY 253
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 15/222 (6%)
Query: 12 RWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W + D + LG G++G VY K+ + VA+K L + ++ VE L+ E +
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLK-EAAV 63
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVAS-LA 126
++HPN+++L G + Y+I+E+ G L L++C E A Y+A+ ++
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 122
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT---LDYLPP 182
A+ Y K+ IHRD+ N L+G +K+ADFG S + T + G + + P
Sbjct: 123 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAP 182
Query: 183 EMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTYR 223
E + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 183 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 224
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 112/228 (49%), Gaps = 15/228 (6%)
Query: 6 SAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQL 63
S+ +W + D + LG G++G VY K+ + VA+K L + ++ VE L
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL 62
Query: 64 RREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--Y 121
+ E + ++HPN+++L G + Y+I+E+ G L L++C E A Y
Sbjct: 63 K-EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVNAVVLLY 120
Query: 122 VAS-LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT--- 176
+A+ ++ A+ Y K+ IHRD+ N L+G +K+ADFG S + T + G
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 177 LDYLPPEMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTYR 223
+ + PE + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 128/276 (46%), Gaps = 17/276 (6%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEH 61
++++ ++K + + +G LG G FG VY N VA+K + K ++ ++ +
Sbjct: 11 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 70
Query: 62 QLRREVEI----QSHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSER 116
R +E+ + ++RL +F LILE +L+ + + E
Sbjct: 71 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEE 130
Query: 117 RAATYVASLARALIYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MC 174
A ++ + A+ +CH V+HRDIK EN+LI +GELK+ DFG + T
Sbjct: 131 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 190
Query: 175 GTLDYLPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
GT Y PPE + H + +WSLG+L Y+ + G PFE E I++ + F
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFR 244
Query: 234 PKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ VSS + LI L S R ++ HPW+
Sbjct: 245 QR--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 278
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 128/276 (46%), Gaps = 17/276 (6%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEH 61
++++ ++K + + +G LG G FG VY N VA+K + K ++ ++ +
Sbjct: 30 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 89
Query: 62 QLRREVEI----QSHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSER 116
R +E+ + ++RL +F LILE +L+ + + E
Sbjct: 90 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEE 149
Query: 117 RAATYVASLARALIYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MC 174
A ++ + A+ +CH V+HRDIK EN+LI +GELK+ DFG + T
Sbjct: 150 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 209
Query: 175 GTLDYLPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
GT Y PPE + H + +WSLG+L Y+ + G PFE E I++ + F
Sbjct: 210 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFR 263
Query: 234 PKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ VSS + LI L S R ++ HPW+
Sbjct: 264 QR--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 297
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 17/222 (7%)
Query: 12 RWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W + D + LG G++G VY+ K+ + VA+K L + ++ VE L+ E +
Sbjct: 26 KWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME---VEEFLK-EAAV 81
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT---YVAS-L 125
++HPN+++L G + Y++ EY G L L++C E A Y+A+ +
Sbjct: 82 MKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECN--REEVTAVVLLYMATQI 139
Query: 126 ARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT---LDYLP 181
+ A+ Y K+ IHRD+ N L+G +K+ADFG S + T + G + +
Sbjct: 140 SSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 199
Query: 182 PEMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTY 222
PE + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 200 PESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 241
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 128/276 (46%), Gaps = 17/276 (6%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEH 61
++++ ++K + + +G LG G FG VY N VA+K + K ++ ++ +
Sbjct: 10 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 69
Query: 62 QLRREVEI----QSHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSER 116
R +E+ + ++RL +F LILE +L+ + + E
Sbjct: 70 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEE 129
Query: 117 RAATYVASLARALIYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MC 174
A ++ + A+ +CH V+HRDIK EN+LI +GELK+ DFG + T
Sbjct: 130 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 189
Query: 175 GTLDYLPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
GT Y PPE + H + +WSLG+L Y+ + G PFE E I++ + F
Sbjct: 190 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFR 243
Query: 234 PKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ VSS + LI L S R ++ HPW+
Sbjct: 244 QR--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 277
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 128/277 (46%), Gaps = 17/277 (6%)
Query: 2 CSEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVE 60
++++ ++K + + +G LG G FG VY N VA+K + K ++ ++
Sbjct: 37 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 96
Query: 61 HQLRREVEI----QSHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSE 115
+ R +E+ + ++RL +F LILE +L+ + + E
Sbjct: 97 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE 156
Query: 116 RRAATYVASLARALIYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-M 173
A ++ + A+ +CH V+HRDIK EN+LI +GELK+ DFG + T
Sbjct: 157 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 216
Query: 174 CGTLDYLPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF 232
GT Y PPE + H + +WSLG+L Y+ + G PFE E I++ + F
Sbjct: 217 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFF 270
Query: 233 PPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ VSS + LI L S R ++ HPW+
Sbjct: 271 RQR--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 17/263 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEI----Q 70
+ + +G LG G FG VY N VA+K + K ++ ++ + R +E+ +
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILE-YAAKGELYKELQKCKYFSERRAATYVASLARAL 129
++RL +F LILE +L+ + + E A ++ + A+
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAV 127
Query: 130 IYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVES 187
+CH V+HRDIK EN+LI +GELK+ DFG + T GT Y PPE +
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 187
Query: 188 VE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
H + +WSLG+L Y+ + G PFE E I++ + F + VSS + LI
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQR--VSSECQHLI 239
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
L S R ++ HPW+
Sbjct: 240 RWCLALRPSDRPTFEEIQNHPWM 262
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 17/263 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEI----Q 70
+ + +G LG G FG VY N VA+K + K ++ ++ + R +E+ +
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 66
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSERRAATYVASLARAL 129
++RL +F LILE +L+ + + E A ++ + A+
Sbjct: 67 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 126
Query: 130 IYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVES 187
+CH V+HRDIK EN+LI +GELK+ DFG + T GT Y PPE +
Sbjct: 127 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 186
Query: 188 VE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
H + +WSLG+L Y+ + G PFE E I++ + F + VSS + LI
Sbjct: 187 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQR--VSSECQHLI 238
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
L S R ++ HPW+
Sbjct: 239 RWCLALRPSDRPTFEEIQNHPWM 261
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 17/263 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEI----Q 70
+ + +G LG G FG VY N VA+K + K ++ ++ + R +E+ +
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSERRAATYVASLARAL 129
++RL +F LILE +L+ + + E A ++ + A+
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 128
Query: 130 IYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVES 187
+CH V+HRDIK EN+LI +GELK+ DFG + T GT Y PPE +
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 188
Query: 188 VE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
H + +WSLG+L Y+ + G PFE E I++ + F + VSS + LI
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQR--VSSECQHLI 240
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
L S R ++ HPW+
Sbjct: 241 RWCLALRPSDRPTFEEIQNHPWM 263
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 17/263 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEI----Q 70
+ + +G LG G FG VY N VA+K + K ++ ++ + R +E+ +
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSERRAATYVASLARAL 129
++RL +F LILE +L+ + + E A ++ + A+
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 130 IYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVES 187
+CH V+HRDIK EN+LI +GELK+ DFG + T GT Y PPE +
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 215
Query: 188 VE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
H + +WSLG+L Y+ + G PFE E I++ + F + VSS + LI
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQR--VSSECQHLI 267
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
L S R ++ HPW+
Sbjct: 268 RWCLALRPSDRPTFEEIQNHPWM 290
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 17/263 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEI----Q 70
+ + +G LG G FG VY N VA+K + K ++ ++ + R +E+ +
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSERRAATYVASLARAL 129
++RL +F LILE +L+ + + E A ++ + A+
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 128
Query: 130 IYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVES 187
+CH V+HRDIK EN+LI +GELK+ DFG + T GT Y PPE +
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 188
Query: 188 VE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
H + +WSLG+L Y+ + G PFE E I++ + F + VSS + LI
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQR--VSSECQHLI 240
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
L S R ++ HPW+
Sbjct: 241 RWCLALRPSDRPTFEEIQNHPWM 263
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 17/263 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEI----Q 70
+ + +G LG G FG VY N VA+K + K ++ ++ + R +E+ +
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSERRAATYVASLARAL 129
++RL +F LILE +L+ + + E A ++ + A+
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 127
Query: 130 IYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVES 187
+CH V+HRDIK EN+LI +GELK+ DFG + T GT Y PPE +
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 187
Query: 188 VE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
H + +WSLG+L Y+ + G PFE E I++ + F + VSS + LI
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQR--VSSECQHLI 239
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
L S R ++ HPW+
Sbjct: 240 RWCLALRPSDRPTFEEIQNHPWM 262
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 17/263 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEI----Q 70
+ + +G LG G FG VY N VA+K + K ++ ++ + R +E+ +
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSERRAATYVASLARAL 129
++RL +F LILE +L+ + + E A ++ + A+
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 128
Query: 130 IYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVES 187
+CH V+HRDIK EN+LI +GELK+ DFG + T GT Y PPE +
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 188
Query: 188 VE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
H + +WSLG+L Y+ + G PFE E I++ + F + VSS + LI
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQR--VSSECQHLI 240
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
L S R ++ HPW+
Sbjct: 241 RWCLALRPSDRPTFEEIQNHPWM 263
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 17/263 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEI----Q 70
+ + +G LG G FG VY N VA+K + K ++ ++ + R +E+ +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSERRAATYVASLARAL 129
++RL +F LILE +L+ + + E A ++ + A+
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123
Query: 130 IYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVES 187
+CH V+HRDIK EN+LI +GELK+ DFG + T GT Y PPE +
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 183
Query: 188 VE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
H + +WSLG+L Y+ + G PFE E I++ + F + VSS + LI
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQR--VSSECQHLI 235
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
L S R ++ HPW+
Sbjct: 236 RWCLALRPSDRPTFEEIQNHPWM 258
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 108/213 (50%), Gaps = 16/213 (7%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALK--VLFKSQLQQSQVE--HQLRREVEIQS 71
N+ + K +G+G FG V+ R + +VA+K +L S+ + +E + +REV I S
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 72 HLRHPNILRLYGYFYDQKRVYLILEYAAKGELY-KELQKCKYFSERRAATYVASLARALI 130
+L HPNI++LYG ++ R +++E+ G+LY + L K + +A +
Sbjct: 79 NLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 131 YCHGKH--VIHRDIKPENLLIGAQGE-----LKIADFGWSVHTFNRRRTMCGTLDYLPPE 183
Y ++ ++HRD++ N+ + + E K+ADFG S + + + G ++ PE
Sbjct: 137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPE 196
Query: 184 MVESVE--HDANVDIWSLGVLCYEFLYGVPPFE 214
+ + E + D +S ++ Y L G PF+
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 15/221 (6%)
Query: 12 RWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W + D + LG G++G VY K+ + VA+K L + ++ VE L+ E +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLK-EAAV 62
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVAS-LA 126
++HPN+++L G + Y+I+E+ G L L++C E A Y+A+ ++
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQIS 121
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT---LDYLPP 182
A+ Y K+ IHRD+ N L+G +K+ADFG S + T + G + + P
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 183 EMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTY 222
E + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 222
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 111/228 (48%), Gaps = 15/228 (6%)
Query: 6 SAKEKKRWTLNDFDIGKP--LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQL 63
S+ +W + DI LG G++G VY K+ + VA+K L + ++ VE L
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL 62
Query: 64 RREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--Y 121
+ E + ++HPN+++L G + Y+I E+ G L L++C E A Y
Sbjct: 63 K-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLY 120
Query: 122 VAS-LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT--- 176
+A+ ++ A+ Y K+ IHRD+ N L+G +K+ADFG S + T + G
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 180
Query: 177 LDYLPPEMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTYR 223
+ + PE + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 15/222 (6%)
Query: 12 RWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W + D + LG G++G VY K+ + VA+K L + ++ VE L+ E +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLK-EAAV 62
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVAS-LA 126
++HPN+++L G + Y+I+E+ G L L++C E A Y+A+ ++
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQIS 121
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT---LDYLPP 182
A+ Y K+ IHRD+ N L+G +K+ADFG S + T + G + + P
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 183 EMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTYR 223
E + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 15/221 (6%)
Query: 12 RWTLNDFDIGKP--LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W + DI LG G++G VY K+ + VA+K L + ++ VE L+ E +
Sbjct: 5 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLK-EAAV 60
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVAS-LA 126
++HPN+++L G + Y+I E+ G L L++C E A Y+A+ ++
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQIS 119
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS----VHTFNRRRTMCGTLDYLPP 182
A+ Y K+ IHRD+ N L+G +K+ADFG S TF + + P
Sbjct: 120 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAP 179
Query: 183 EMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTY 222
E + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVY 220
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 17/251 (6%)
Query: 18 FDIGKPLGRGKFGHV----YLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++G+ +G G+FG V Y++ E N +A+ + V + +E
Sbjct: 392 IELGRCIGEGQFGDVHQGIYMSPE---NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF 448
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVASLARALIY 131
HP+I++L G + V++I+E GEL LQ + FS A+ Y L+ AL Y
Sbjct: 449 DHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAY 506
Query: 132 CHGKHVIHRDIKPENLLIGAQGELKIADFGWSVH----TFNRRRTMCGTLDYLPPEMVES 187
K +HRDI N+L+ A +K+ DFG S + T+ + + ++ PE +
Sbjct: 507 LESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 566
Query: 188 VEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ D+W GV +E L +GV PF+ +++D RI + + P P L+
Sbjct: 567 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPPNCPPTLYSLM 625
Query: 247 SQMLVKDSSQR 257
++ D S+R
Sbjct: 626 TKCWAYDPSRR 636
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 107/213 (50%), Gaps = 16/213 (7%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALK--VLFKSQLQQSQVE--HQLRREVEIQS 71
N+ + K +G+G FG V+ R + +VA+K +L S+ + +E + +REV I S
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 72 HLRHPNILRLYGYFYDQKRVYLILEYAAKGELY-KELQKCKYFSERRAATYVASLARALI 130
+L HPNI++LYG ++ R +++E+ G+LY + L K + +A +
Sbjct: 79 NLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 131 YCHGKH--VIHRDIKPENLLIGAQGE-----LKIADFGWSVHTFNRRRTMCGTLDYLPPE 183
Y ++ ++HRD++ N+ + + E K+ADFG S + + + G ++ PE
Sbjct: 137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPE 196
Query: 184 MV--ESVEHDANVDIWSLGVLCYEFLYGVPPFE 214
+ E + D +S ++ Y L G PF+
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 124/274 (45%), Gaps = 31/274 (11%)
Query: 17 DFDIGKPLGRGKFGHVYLAR-----EKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
D + + LG G FG V+LA + +VA+K L L + +RE E+ +
Sbjct: 16 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARK---DFQREAELLT 72
Query: 72 HLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQ---------------KCKYFSER 116
+L+H +I++ YG D + ++ EY G+L K L+ + K
Sbjct: 73 NLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGL 132
Query: 117 RAATYVAS-LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCG 175
++AS +A ++Y +H +HRD+ N L+GA +KI DFG S ++ G
Sbjct: 133 SQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVG 192
Query: 176 T-----LDYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVD 229
+ ++PPE + + D+WS GV+ +E F YG P+ +++ I Q
Sbjct: 193 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGR 252
Query: 230 LKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKL 263
+ P+ + D++ ++ QRL + ++
Sbjct: 253 VLERPR-VCPKEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 111/228 (48%), Gaps = 15/228 (6%)
Query: 6 SAKEKKRWTLNDFDIGKP--LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQL 63
S+ +W + DI LG G++G VY K+ + VA+K L + ++ VE L
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL 62
Query: 64 RREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--Y 121
+ E + ++HPN+++L G + Y+I E+ G L L++C E A Y
Sbjct: 63 K-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLY 120
Query: 122 VAS-LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT--- 176
+A+ ++ A+ Y K+ IHRD+ N L+G +K+ADFG S + T + G
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 177 LDYLPPEMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTYR 223
+ + PE + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 132/305 (43%), Gaps = 52/305 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISL 88
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VYL++E L + +Q R + + + + + H
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQM--ELDHERMSYLLYQMLXGIKHLHSA 145
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 146 GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + F +++ D + ++++
Sbjct: 206 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 265
Query: 228 -VDLKFP---PKPIV----------SSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
L FP P + +S A+DL+S+MLV D ++R+ + L+HP+I
Sbjct: 266 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 325
Query: 274 DPSGV 278
DP+ V
Sbjct: 326 DPAEV 330
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 111/236 (47%), Gaps = 32/236 (13%)
Query: 9 EKKRWTL--NDFDIGKPLGRGKFGHVYLAR-----EKRSNHIVALKV-LFKSQLQQSQVE 60
E RW L + +GKPLG G FG V LA + + N + + V + KS + +
Sbjct: 4 EDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS 63
Query: 61 HQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK--------C- 110
L E+E+ + +H NI+ L G +Y+I+EYA+KG L + LQ C
Sbjct: 64 -DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCY 122
Query: 111 -------KYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS 163
+ S + + +AR + Y K IHRD+ N+L+ +KIADFG +
Sbjct: 123 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 182
Query: 164 --VHTFN-RRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPF 213
+H + ++T G L ++ PE + + D+WS GVL +E F G P+
Sbjct: 183 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 238
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 127/276 (46%), Gaps = 17/276 (6%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEH 61
++++ ++K + + +G LG G FG VY N VA+K + K ++ ++ +
Sbjct: 24 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 83
Query: 62 QLRREVEI----QSHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSER 116
R +E+ + ++RL +F LILE +L+ + + E
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEE 143
Query: 117 RAATYVASLARALIYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MC 174
A ++ + A+ +CH V+HRDIK EN+LI +GELK+ DFG + T
Sbjct: 144 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 203
Query: 175 GTLDYLPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
GT Y PPE + H + +WSLG+L Y+ + G PFE E I+ + F
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFR 257
Query: 234 PKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ VSS + LI L S R ++ HPW+
Sbjct: 258 QR--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 17/251 (6%)
Query: 18 FDIGKPLGRGKFGHV----YLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++G+ +G G+FG V Y++ E N +A+ + V + +E
Sbjct: 12 IELGRCIGEGQFGDVHQGIYMSPE---NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF 68
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVASLARALIY 131
HP+I++L G + V++I+E GEL LQ + FS A+ Y L+ AL Y
Sbjct: 69 DHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAY 126
Query: 132 CHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT----LDYLPPEMVES 187
K +HRDI N+L+ + +K+ DFG S + + + ++ PE +
Sbjct: 127 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINF 186
Query: 188 VEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ D+W GV +E L +GV PF+ +++D RI + + P P L+
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPPNCPPTLYSLM 245
Query: 247 SQMLVKDSSQR 257
++ D S+R
Sbjct: 246 TKCWAYDPSRR 256
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 111/228 (48%), Gaps = 15/228 (6%)
Query: 6 SAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQL 63
S+ +W + D + LG G++G VY K+ + VA+K L + ++ VE L
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL 62
Query: 64 RREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--Y 121
+ E + ++HPN+++L G + Y+I E+ G L L++C E A Y
Sbjct: 63 K-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLY 120
Query: 122 VAS-LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT--- 176
+A+ ++ A+ Y K+ IHRD+ N L+G +K+ADFG S + T + G
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 177 LDYLPPEMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTYR 223
+ + PE + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 17/263 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEI----Q 70
+ + +G LG G FG VY N VA+K + K ++ ++ + R +E+ +
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSERRAATYVASLARAL 129
++RL +F LILE +L+ + + E A ++ + A+
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 130 IYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVES 187
+CH V+HRDIK EN+LI +GELK+ DFG + T GT Y PPE +
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 215
Query: 188 VE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
H + +WSLG+L Y+ + G PFE E I+ + F + VSS + LI
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQR--VSSECQHLI 267
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
L S R ++ HPW+
Sbjct: 268 RWCLALRPSDRPTFEEIQNHPWM 290
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 17/263 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEI----Q 70
+ + +G LG G FG VY N VA+K + K ++ ++ + R +E+ +
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSERRAATYVASLARAL 129
++RL +F LILE +L+ + + E A ++ + A+
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 130 IYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVES 187
+CH V+HRDIK EN+LI +GELK+ DFG + T GT Y PPE +
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 216
Query: 188 VE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
H + +WSLG+L Y+ + G PFE E I+ + F + VSS + LI
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQR--VSSECQHLI 268
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
L S R ++ HPW+
Sbjct: 269 RWCLALRPSDRPTFEEIQNHPWM 291
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 127/276 (46%), Gaps = 17/276 (6%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEH 61
++++ ++K + + +G LG G FG VY N VA+K + K ++ ++ +
Sbjct: 23 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 82
Query: 62 QLRREVEI----QSHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSER 116
R +E+ + ++RL +F LILE +L+ + + E
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEE 142
Query: 117 RAATYVASLARALIYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MC 174
A ++ + A+ +CH V+HRDIK EN+LI +GELK+ DFG + T
Sbjct: 143 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 202
Query: 175 GTLDYLPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
GT Y PPE + H + +WSLG+L Y+ + G PFE E I+ + F
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFR 256
Query: 234 PKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ VSS + LI L S R ++ HPW+
Sbjct: 257 QR--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 17/263 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEI----Q 70
+ + +G LG G FG VY N VA+K + K ++ ++ + R +E+ +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSERRAATYVASLARAL 129
++RL +F LILE +L+ + + E A ++ + A+
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123
Query: 130 IYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVES 187
+CH V+HRDIK EN+LI +GELK+ DFG + T GT Y PPE +
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 183
Query: 188 VE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
H + +WSLG+L Y+ + G PFE E I+ + F + VSS + LI
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQR--VSSECQHLI 235
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
L S R ++ HPW+
Sbjct: 236 RWCLALRPSDRPTFEEIQNHPWM 258
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 15/222 (6%)
Query: 12 RWTLNDFDIGKP--LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W + DI LG G++G VY K+ + VA+K L + ++ VE L+ E +
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLK-EAAV 63
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVAS-LA 126
++HPN+++L G + Y+I E+ G L L++C E A Y+A+ ++
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 122
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT---LDYLPP 182
A+ Y K+ IHRD+ N L+G +K+ADFG S + T + G + + P
Sbjct: 123 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAP 182
Query: 183 EMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTYR 223
E + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 183 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 224
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 135/303 (44%), Gaps = 52/303 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VY+++E L + +Q R + + + + + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 145
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKEN 205
Query: 194 VDIWSLG-----VLCYEFLY----------------GVP-PFEAKEHSDTYRRIVQ---- 227
VDIWS+G ++C++ L+ G P P K+ T R V+
Sbjct: 206 VDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVENRPK 265
Query: 228 ----------VDLKFPP----KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
D+ FP + +S A+DL+S+MLV D+S+R+ + + L+HP+I
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 274 DPS 276
DPS
Sbjct: 326 DPS 328
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 25/212 (11%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D G+ LG+G FG + + ++ +K L + + + +EV++ L H
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD---EETQRTFLKEVKVMRCLEH 66
Query: 76 PNILRLYGYFYDQKRVYLILEYAAKGEL---YKELQKCKYFSERRAATYVASLARALIYC 132
PN+L+ G Y KR+ I EY G L K + +S+R ++ +A + Y
Sbjct: 67 PNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQR--VSFAKDIASGMAYL 124
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFN-----------------RRRTMCG 175
H ++IHRD+ N L+ + +ADFG + + +R T+ G
Sbjct: 125 HSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG 184
Query: 176 TLDYLPPEMVESVEHDANVDIWSLGVLCYEFL 207
++ PEM+ +D VD++S G++ E +
Sbjct: 185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 111/228 (48%), Gaps = 15/228 (6%)
Query: 6 SAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQL 63
S+ +W + D + LG G++G VY K+ + VA+K L + ++ VE L
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL 62
Query: 64 RREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--Y 121
+ E + ++HPN+++L G + Y+I E+ G L L++C E A Y
Sbjct: 63 K-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLY 120
Query: 122 VAS-LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT--- 176
+A+ ++ A+ Y K+ IHRD+ N L+G +K+ADFG S + T + G
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 177 LDYLPPEMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTYR 223
+ + PE + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 118/242 (48%), Gaps = 18/242 (7%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP- 76
+++ K +G+G FG V A + + + VALK++ + + Q E+ I HLR
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMV----RNEKRFHRQAAEEIRILEHLRKQD 154
Query: 77 -----NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY--FSERRAATYVASLARAL 129
N++ + F + + + E + LY+ ++K K+ FS + S+ + L
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGE--LKIADFGWSVHTFNRRRTMCGTLDYLPPEMVES 187
H +IH D+KPEN+L+ QG +K+ DFG S + R T + Y PE++
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILG 273
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA--AKDL 245
+ +D+WSLG + E L G P ++ D ++++ L P + ++ ++ AK+
Sbjct: 274 ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL-LGMPSQKLLDASKRAKNF 332
Query: 246 IS 247
+S
Sbjct: 333 VS 334
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 15/222 (6%)
Query: 12 RWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W + D + LG G++G VY K+ + VA+K L + ++ VE L+ E +
Sbjct: 20 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLK-EAAV 75
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVAS-LA 126
++HPN+++L G + Y+I E+ G L L++C E A Y+A+ ++
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 134
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT---LDYLPP 182
A+ Y K+ IHRD+ N L+G +K+ADFG S + T + G + + P
Sbjct: 135 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 194
Query: 183 EMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTYR 223
E + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 195 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 236
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 15/222 (6%)
Query: 12 RWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W + D + LG G++G VY K+ + VA+K L + ++ VE L+ E +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLK-EAAV 62
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVAS-LA 126
++HPN+++L G + Y+I E+ G L L++C E A Y+A+ ++
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 121
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT---LDYLPP 182
A+ Y K+ IHRD+ N L+G +K+ADFG S + T + G + + P
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 183 EMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTYR 223
E + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 15/222 (6%)
Query: 12 RWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W + D + LG G++G VY K+ + VA+K L + ++ VE L+ E +
Sbjct: 11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLK-EAAV 66
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVAS-LA 126
++HPN+++L G + Y+I E+ G L L++C E A Y+A+ ++
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 125
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT---LDYLPP 182
A+ Y K+ IHRD+ N L+G +K+ADFG S + T + G + + P
Sbjct: 126 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 185
Query: 183 EMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTYR 223
E + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 186 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 227
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 15/222 (6%)
Query: 12 RWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W + D + LG G++G VY K+ + VA+K L + ++ VE L+ E +
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLK-EAAV 64
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVAS-LA 126
++HPN+++L G + Y+I E+ G L L++C E A Y+A+ ++
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 123
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT---LDYLPP 182
A+ Y K+ IHRD+ N L+G +K+ADFG S + T + G + + P
Sbjct: 124 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAP 183
Query: 183 EMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTYR 223
E + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 225
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 118/242 (48%), Gaps = 18/242 (7%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP- 76
+++ K +G+G FG V A + + + VALK++ + + Q E+ I HLR
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMV----RNEKRFHRQAAEEIRILEHLRKQD 154
Query: 77 -----NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY--FSERRAATYVASLARAL 129
N++ + F + + + E + LY+ ++K K+ FS + S+ + L
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGE--LKIADFGWSVHTFNRRRTMCGTLDYLPPEMVES 187
H +IH D+KPEN+L+ QG +K+ DFG S + R T + Y PE++
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILG 273
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA--AKDL 245
+ +D+WSLG + E L G P ++ D ++++ L P + ++ ++ AK+
Sbjct: 274 ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL-LGMPSQKLLDASKRAKNF 332
Query: 246 IS 247
+S
Sbjct: 333 VS 334
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 15/222 (6%)
Query: 12 RWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W + D + LG G++G VY K+ + VA+K L + ++ VE L+ E +
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLK-EAAV 64
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVAS-LA 126
++HPN+++L G + Y+I E+ G L L++C E A Y+A+ ++
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 123
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT---LDYLPP 182
A+ Y K+ IHRD+ N L+G +K+ADFG S + T + G + + P
Sbjct: 124 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 183
Query: 183 EMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTYR 223
E + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 225
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 109/221 (49%), Gaps = 15/221 (6%)
Query: 12 RWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W + D + LG G++G VY K+ + VA+K L + ++ VE L+ E +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLK-EAAV 62
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVAS-LA 126
++HPN+++L G + Y+I E+ G L L++C E A Y+A+ ++
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 121
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT---LDYLPP 182
A+ Y K+ IHRD+ N L+G +K+ADFG S + T + G + + P
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 183 EMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTY 222
E + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 222
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 131/305 (42%), Gaps = 52/305 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 88
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VYL++E L + +Q R + + + + + H
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQM--ELDHERMSYLLYQMLXGIKHLHSA 145
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 146 GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + F +++ D + ++++
Sbjct: 206 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 265
Query: 228 -VDLKFPP-------------KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
L FP + +S A+DL+S+MLV D ++R+ + L+HP+I
Sbjct: 266 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 325
Query: 274 DPSGV 278
DP+ V
Sbjct: 326 DPAEV 330
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 109/221 (49%), Gaps = 15/221 (6%)
Query: 12 RWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W + D + LG G++G VY K+ + VA+K L + ++ VE L+ E +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLK-EAAV 62
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVAS-LA 126
++HPN+++L G + Y+I E+ G L L++C E A Y+A+ ++
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQIS 121
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT---LDYLPP 182
A+ Y K+ IHRD+ N L+G +K+ADFG S + T + G + + P
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 183 EMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTY 222
E + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 222
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 15/222 (6%)
Query: 12 RWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W + D + LG G++G VY K+ + VA+K L + ++ VE L+ E +
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLK-EAAV 64
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVAS-LA 126
++HPN+++L G + Y+I E+ G L L++C E A Y+A+ ++
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 123
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT---LDYLPP 182
A+ Y K+ IHRD+ N L+G +K+ADFG S + T + G + + P
Sbjct: 124 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 183
Query: 183 EMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTYR 223
E + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 225
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 132/305 (43%), Gaps = 52/305 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 81
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VYL++E L + +Q R + + + + + H
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQM--ELDHERMSYLLYQMLXGIKHLHSA 138
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 139 GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 198
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + F +++ D + ++++
Sbjct: 199 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 258
Query: 228 -VDLKFP---PKPIV----------SSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
L FP P + +S A+DL+S+MLV D ++R+ + L+HP+I
Sbjct: 259 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 318
Query: 274 DPSGV 278
DP+ V
Sbjct: 319 DPAEV 323
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 17/251 (6%)
Query: 18 FDIGKPLGRGKFGHV----YLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
++G+ +G G+FG V Y++ E N +A+ + V + +E
Sbjct: 392 IELGRCIGEGQFGDVHQGIYMSPE---NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF 448
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVASLARALIY 131
HP+I++L G + V++I+E GEL LQ + FS A+ Y L+ AL Y
Sbjct: 449 DHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAY 506
Query: 132 CHGKHVIHRDIKPENLLIGAQGELKIADFGWSVH----TFNRRRTMCGTLDYLPPEMVES 187
K +HRDI N+L+ + +K+ DFG S + T+ + + ++ PE +
Sbjct: 507 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 566
Query: 188 VEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ D+W GV +E L +GV PF+ +++D RI + + P P L+
Sbjct: 567 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPPNCPPTLYSLM 625
Query: 247 SQMLVKDSSQR 257
++ D S+R
Sbjct: 626 TKCWAYDPSRR 636
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 120/263 (45%), Gaps = 17/263 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEI----Q 70
+ + +G LG G FG VY N VA+K + K ++ ++ + R +E+ +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSERRAATYVASLARAL 129
++RL +F LILE +L+ + + E A ++ + A+
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123
Query: 130 IYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVES 187
+CH V+HRDIK EN+LI +GELK+ DFG + T GT Y PPE +
Sbjct: 124 RHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 183
Query: 188 VE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
H + +WSLG+L Y+ + G PFE E I++ + F + VS + LI
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQR--VSXECQHLI 235
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
L S R ++ HPW+
Sbjct: 236 RWCLALRPSDRPTFEEIQNHPWM 258
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 15/222 (6%)
Query: 12 RWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W + D + LG G++G VY K+ + VA+K L + ++ VE L+ E +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLK-EAAV 62
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVAS-LA 126
++HPN+++L G + Y+I E+ G L L++C E A Y+A+ ++
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQIS 121
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT---LDYLPP 182
A+ Y K+ IHRD+ N L+G +K+ADFG S + T + G + + P
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 183 EMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTYR 223
E + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 38/251 (15%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
L DF+ + LGRG FG V+ A+ K + A+K + + ++ ++ REV+ + L
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR--EKVMREVKALAKLE 61
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFS--------------ERRAAT 120
HP I+R + + ++ + + K LY ++Q C+ + ER
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 121 YV-ASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGW---------------SV 164
++ +A A+ + H K ++HRD+KP N+ +K+ DFG +
Sbjct: 122 HIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 165 HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRR 224
+ R GT Y+ PE + + VDI+SLG++ +E LY PF + + R
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ--MERVRT 236
Query: 225 IVQV-DLKFPP 234
+ V +LKFPP
Sbjct: 237 LTDVRNLKFPP 247
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 132/305 (43%), Gaps = 52/305 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 126
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VYL++E L + +Q R + + + + + H
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 183
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 243
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + F +++ D + ++++
Sbjct: 244 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 303
Query: 228 -VDLKFP---PKPIV----------SSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
L FP P + +S A+DL+S+MLV D ++R+ + L+HP+I
Sbjct: 304 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 363
Query: 274 DPSGV 278
DP+ V
Sbjct: 364 DPAEV 368
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 127/276 (46%), Gaps = 17/276 (6%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEH 61
++++ ++K + + +G LG G FG VY N VA+K + K ++ ++ +
Sbjct: 10 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 69
Query: 62 QLRREVEI----QSHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSER 116
R +E+ + ++RL +F LILE +L+ + + E
Sbjct: 70 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEE 129
Query: 117 RAATYVASLARALIYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MC 174
A ++ + A+ +CH V+HRDIK EN+LI +GELK+ DFG + T
Sbjct: 130 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 189
Query: 175 GTLDYLPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
GT Y PPE + H + +WSLG+L Y+ + G PFE E I++ + F
Sbjct: 190 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFR 243
Query: 234 PKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ VS + LI L S R ++ HPW+
Sbjct: 244 QR--VSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 277
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 127/276 (46%), Gaps = 17/276 (6%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEH 61
++++ ++K + + +G LG G FG VY N VA+K + K ++ ++ +
Sbjct: 11 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 70
Query: 62 QLRREVEI----QSHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSER 116
R +E+ + ++RL +F LILE +L+ + + E
Sbjct: 71 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEE 130
Query: 117 RAATYVASLARALIYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MC 174
A ++ + A+ +CH V+HRDIK EN+LI +GELK+ DFG + T
Sbjct: 131 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 190
Query: 175 GTLDYLPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
GT Y PPE + H + +WSLG+L Y+ + G PFE E I++ + F
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFR 244
Query: 234 PKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ VS + LI L S R ++ HPW+
Sbjct: 245 QR--VSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 278
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 127/277 (45%), Gaps = 17/277 (6%)
Query: 2 CSEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVE 60
++++ ++K + + +G LG G FG VY N VA+K + K ++ ++
Sbjct: 42 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 101
Query: 61 HQLRREVEI----QSHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSE 115
+ R +E+ + ++RL +F LILE +L+ + + E
Sbjct: 102 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE 161
Query: 116 RRAATYVASLARALIYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-M 173
A ++ + A+ +CH V+HRDIK EN+LI +GELK+ DFG + T
Sbjct: 162 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 221
Query: 174 CGTLDYLPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF 232
GT Y PPE + H + +WSLG+L Y+ + G PFE E I++ + F
Sbjct: 222 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFF 275
Query: 233 PPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ VS + LI L S R ++ HPW+
Sbjct: 276 RQR--VSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 310
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 130/303 (42%), Gaps = 52/303 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISL 88
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VYL++E L + +Q R + + + + + H
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 145
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 146 GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + F +++ D + ++++
Sbjct: 206 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 265
Query: 228 -VDLKFPP-------------KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
L FP + +S A+DL+S+MLV D ++R+ + L+HP+I
Sbjct: 266 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 325
Query: 274 DPS 276
DP+
Sbjct: 326 DPA 328
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 127/276 (46%), Gaps = 17/276 (6%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEH 61
++++ ++K + + +G LG G FG VY N VA+K + K ++ ++ +
Sbjct: 38 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 97
Query: 62 QLRREVEI----QSHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSER 116
R +E+ + ++RL +F LILE +L+ + + E
Sbjct: 98 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEE 157
Query: 117 RAATYVASLARALIYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MC 174
A ++ + A+ +CH V+HRDIK EN+LI +GELK+ DFG + T
Sbjct: 158 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 217
Query: 175 GTLDYLPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
GT Y PPE + H + +WSLG+L Y+ + G PFE E I++ + F
Sbjct: 218 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFR 271
Query: 234 PKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ VS + LI L S R ++ HPW+
Sbjct: 272 QR--VSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 132/305 (43%), Gaps = 52/305 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + + VA+K L + Q+ + + RE+ + + H NI+ L
Sbjct: 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK-RAYRELVLMKCVNHKNIISL 126
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VYL++E L + +Q R + + + + + H
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 183
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 243
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + F +++ D + ++++
Sbjct: 244 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 303
Query: 228 -VDLKFPP-------------KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
L FP + +S A+DL+S+MLV D ++R+ + L+HP+I
Sbjct: 304 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 363
Query: 274 DPSGV 278
DP+ V
Sbjct: 364 DPAEV 368
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 131/305 (42%), Gaps = 52/305 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 31 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 89
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VYL++E L + +Q R + + + + + H
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 146
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 147 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 206
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + F +++ D + ++++
Sbjct: 207 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 266
Query: 228 -VDLKFPP-------------KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
L FP + +S A+DL+S+MLV D ++R+ + L+HP+I
Sbjct: 267 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 326
Query: 274 DPSGV 278
DP+ V
Sbjct: 327 DPAEV 331
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 131/305 (42%), Gaps = 52/305 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 88
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VYL++E L + +Q R + + + + + H
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 145
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + F +++ D + ++++
Sbjct: 206 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 265
Query: 228 -VDLKFPP-------------KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
L FP + +S A+DL+S+MLV D ++R+ + L+HP+I
Sbjct: 266 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 325
Query: 274 DPSGV 278
DP+ V
Sbjct: 326 DPAEV 330
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 131/305 (42%), Gaps = 52/305 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 31 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 89
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VYL++E L + +Q R + + + + + H
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 146
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 147 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 206
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + F +++ D + ++++
Sbjct: 207 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 266
Query: 228 -VDLKFPP-------------KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
L FP + +S A+DL+S+MLV D ++R+ + L+HP+I
Sbjct: 267 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 326
Query: 274 DPSGV 278
DP+ V
Sbjct: 327 DPAEV 331
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 131/305 (42%), Gaps = 52/305 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 88
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VYL++E L + +Q R + + + + + H
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 145
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + F +++ D + ++++
Sbjct: 206 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 265
Query: 228 -VDLKFPP-------------KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
L FP + +S A+DL+S+MLV D ++R+ + L+HP+I
Sbjct: 266 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 325
Query: 274 DPSGV 278
DP+ V
Sbjct: 326 DPAEV 330
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 131/305 (42%), Gaps = 52/305 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 81
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VYL++E L + +Q R + + + + + H
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 138
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 139 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 198
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + F +++ D + ++++
Sbjct: 199 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 258
Query: 228 -VDLKFPP-------------KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
L FP + +S A+DL+S+MLV D ++R+ + L+HP+I
Sbjct: 259 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 318
Query: 274 DPSGV 278
DP+ V
Sbjct: 319 DPAEV 323
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 120/263 (45%), Gaps = 17/263 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEI----Q 70
+ + +G LG G FG VY N VA+K + K ++ ++ + R +E+ +
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 90
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSERRAATYVASLARAL 129
++RL +F LILE +L+ + + E A ++ + A+
Sbjct: 91 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 150
Query: 130 IYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVES 187
+CH V+HRDIK EN+LI +GELK+ DFG + T GT Y PPE +
Sbjct: 151 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 210
Query: 188 VE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
H + +WSLG+L Y+ + G PFE E I++ + F + VS + LI
Sbjct: 211 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQR--VSXECQHLI 262
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
L S R ++ HPW+
Sbjct: 263 RWCLALRPSDRPTFEEIQNHPWM 285
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 131/305 (42%), Gaps = 52/305 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 29 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 87
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VYL++E L + +Q R + + + + + H
Sbjct: 88 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 144
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 145 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 204
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + F +++ D + ++++
Sbjct: 205 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 264
Query: 228 -VDLKFPP-------------KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
L FP + +S A+DL+S+MLV D ++R+ + L+HP+I
Sbjct: 265 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 324
Query: 274 DPSGV 278
DP+ V
Sbjct: 325 DPAEV 329
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 131/305 (42%), Gaps = 52/305 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 24 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 82
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VYL++E L + +Q R + + + + + H
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 139
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 140 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 199
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + F +++ D + ++++
Sbjct: 200 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 259
Query: 228 -VDLKFPP-------------KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
L FP + +S A+DL+S+MLV D ++R+ + L+HP+I
Sbjct: 260 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 319
Query: 274 DPSGV 278
DP+ V
Sbjct: 320 DPAEV 324
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 132/305 (43%), Gaps = 52/305 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 24 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 82
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VYL++E L + +Q R + + + + + H
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 139
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 140 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 199
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + F +++ D + ++++
Sbjct: 200 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 259
Query: 228 -VDLKFP---PKPIV----------SSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
L FP P + +S A+DL+S+MLV D ++R+ + L+HP+I
Sbjct: 260 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 319
Query: 274 DPSGV 278
DP+ V
Sbjct: 320 DPAEV 324
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 121/256 (47%), Gaps = 12/256 (4%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LGRG +G V R S I+A+K + + Q Q + ++ +++ + P + YG
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRT-VDCPFTVTFYG 117
Query: 84 YFYDQKRVYLILEY--AAKGELYKE-LQKCKYFSERRAATYVASLARALIYCHGK-HVIH 139
+ + V++ +E + + YK+ + K + E S+ +AL + H K VIH
Sbjct: 118 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIH 177
Query: 140 RDIKPENLLIGAQGELKIADFGWSVHTFNR--RRTMCGTLDYLPPEMV----ESVEHDAN 193
RD+KP N+LI A G++K+ DFG S + + + G Y+ PE + +
Sbjct: 178 RDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVK 237
Query: 194 VDIWSLGVLCYEFLYGVPPFEA-KEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVK 252
DIWSLG+ E P+++ +++V+ P S+ D SQ L K
Sbjct: 238 SDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKK 297
Query: 253 DSSQRLPLHKLLEHPW 268
+S +R +L++HP+
Sbjct: 298 NSKERPTYPELMQHPF 313
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 132/303 (43%), Gaps = 52/303 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 35 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 93
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VY+++E L + +Q R + + + + + H
Sbjct: 94 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 150
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 151 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 210
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VD+WS+G + E + F +++ D + ++++
Sbjct: 211 VDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPK 270
Query: 228 ----------VDLKFPP----KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
D+ FP + +S A+DL+S+MLV D+S+R+ + + L+HP+I
Sbjct: 271 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 330
Query: 274 DPS 276
DPS
Sbjct: 331 DPS 333
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRR---EVEIQ 70
T +++ + LG G FG+V + + VA+K Q +Q R E++I
Sbjct: 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIK-----QCRQELSPKNRERWCLEIQIM 66
Query: 71 SHLRHPNILRLYGYFYDQKRV------YLILEYAAKGELYK---ELQKCKYFSERRAATY 121
L HPN++ +++ L +EY G+L K + + C E T
Sbjct: 67 KKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 126
Query: 122 VASLARALIYCHGKHVIHRDIKPENLLI--GAQGEL-KIADFGWSVHTFNRRRTMC---- 174
++ ++ AL Y H +IHRD+KPEN+++ G Q + KI D G++ + +C
Sbjct: 127 LSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFV 184
Query: 175 GTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPF 213
GTL YL PE++E ++ VD WS G L +E + G PF
Sbjct: 185 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 14 TLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRR---EVEIQ 70
T +++ + LG G FG+V + + VA+K Q +Q R E++I
Sbjct: 13 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIK-----QCRQELSPKNRERWCLEIQIM 67
Query: 71 SHLRHPNILRLYGYFYDQKRV------YLILEYAAKGELYK---ELQKCKYFSERRAATY 121
L HPN++ +++ L +EY G+L K + + C E T
Sbjct: 68 KKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 127
Query: 122 VASLARALIYCHGKHVIHRDIKPENLLI--GAQGEL-KIADFGWSVHTFNRRRTMC---- 174
++ ++ AL Y H +IHRD+KPEN+++ G Q + KI D G++ + +C
Sbjct: 128 LSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFV 185
Query: 175 GTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPF 213
GTL YL PE++E ++ VD WS G L +E + G PF
Sbjct: 186 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 132/303 (43%), Gaps = 52/303 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 24 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 82
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VY+++E L + +Q R + + + + + H
Sbjct: 83 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 139
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 140 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 199
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VD+WS+G + E + F +++ D + ++++
Sbjct: 200 VDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPK 259
Query: 228 ----------VDLKFPP----KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
D+ FP + +S A+DL+S+MLV D+S+R+ + + L+HP+I
Sbjct: 260 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 319
Query: 274 DPS 276
DPS
Sbjct: 320 DPS 322
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 126/276 (45%), Gaps = 17/276 (6%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEH 61
++++ ++K + + +G LG G FG VY N VA+K + K ++ ++ +
Sbjct: 23 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 82
Query: 62 QLRREVEI----QSHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSER 116
R +E+ + ++RL +F LILE +L+ + + E
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEE 142
Query: 117 RAATYVASLARALIYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MC 174
A ++ + A+ +CH V+HRDIK EN+LI +GELK+ DFG + T
Sbjct: 143 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 202
Query: 175 GTLDYLPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
GT Y PPE + H + +WSLG+L Y+ + G PFE E I+ + F
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFR 256
Query: 234 PKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ VS + LI L S R ++ HPW+
Sbjct: 257 QR--VSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 35/262 (13%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG VY A+ S +VA+K + LQ + ++ RE++I L H NI+RL
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRL 112
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA----SLARALIY 131
+FY D+ + L+L+Y + +Y+ + + YV L R+L Y
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 132 CHGKHVIHRDIKPENLLIGAQGE-LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMV-E 186
H + HRDIKP+NLL+ LK+ DFG + V +C Y PE++
Sbjct: 172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFG 230
Query: 187 SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ ++ +++D+WS G + E L G P F D I++V + + ++ I
Sbjct: 231 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---------LGTPTREQI 281
Query: 247 SQMLVKDSSQRLPLHKLLEHPW 268
+M + + P ++ HPW
Sbjct: 282 REMNPNYTEFKFP--QIKAHPW 301
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 35/262 (13%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG VY A+ S +VA+K + LQ + ++ RE++I L H NI+RL
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRL 90
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA----SLARALIY 131
+FY D+ + L+L+Y + +Y+ + + YV L R+L Y
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 132 CHGKHVIHRDIKPENLLIGAQGE-LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMV-E 186
H + HRDIKP+NLL+ LK+ DFG + V +C Y PE++
Sbjct: 150 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFG 208
Query: 187 SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ ++ +++D+WS G + E L G P F D I++V + + ++ I
Sbjct: 209 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---------LGTPTREQI 259
Query: 247 SQMLVKDSSQRLPLHKLLEHPW 268
+M + + P ++ HPW
Sbjct: 260 REMNPNYTEFKFP--QIKAHPW 279
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 119/263 (45%), Gaps = 17/263 (6%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEI----Q 70
+ + +G LG G FG VY N VA+K + K ++ ++ + R +E+ +
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSERRAATYVASLARAL 129
++RL +F LILE +L+ + + E A ++ + A+
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 130 IYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVES 187
+CH V+HRDIK EN+LI +GELK+ DFG + T GT Y PPE +
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 216
Query: 188 VE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
H + +WSLG+L Y+ + G PFE E I+ + F + VS + LI
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQR--VSXECQHLI 268
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
L S R ++ HPW+
Sbjct: 269 RWCLALRPSDRPTFEEIQNHPWM 291
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALK--VLFKSQLQQSQVE--HQLRREVEIQS 71
N+ + K +G+G FG V+ R + +VA+K +L S+ + +E + +REV I S
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 72 HLRHPNILRLYGYFYDQKRVYLILEYAAKGELY-KELQKCKYFSERRAATYVASLARALI 130
+L HPNI++LYG ++ R +++E+ G+LY + L K + +A +
Sbjct: 79 NLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 131 YCHGKH--VIHRDIKPENLLIGAQGE-----LKIADFGWSVHTFNRRRTMCGTLDYLPPE 183
Y ++ ++HRD++ N+ + + E K+ADF S + + + G ++ PE
Sbjct: 137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPE 196
Query: 184 MV--ESVEHDANVDIWSLGVLCYEFLYGVPPFE 214
+ E + D +S ++ Y L G PF+
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 126/276 (45%), Gaps = 17/276 (6%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEH 61
++++ ++K + + +G LG G FG VY N VA+K + K ++ ++ +
Sbjct: 24 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 83
Query: 62 QLRREVEI----QSHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSER 116
R +E+ + ++RL +F LILE +L+ + + E
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEE 143
Query: 117 RAATYVASLARALIYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MC 174
A ++ + A+ +CH V+HRDIK EN+LI +GELK+ DFG + T
Sbjct: 144 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 203
Query: 175 GTLDYLPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
GT Y PPE + H + +WSLG+L Y+ + G PFE E I+ + F
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFR 257
Query: 234 PKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ VS + LI L S R ++ HPW+
Sbjct: 258 QR--VSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 132/303 (43%), Gaps = 52/303 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VY+++E L + +Q R + + + + + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 145
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKEN 205
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VD+WS+G + E + F +++ D + ++++
Sbjct: 206 VDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPK 265
Query: 228 ----------VDLKFPP----KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQNA 273
D+ FP + +S A+DL+S+MLV D+S+R+ + + L+HP+I
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 274 DPS 276
DPS
Sbjct: 326 DPS 328
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 35/262 (13%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG VY A+ S +VA+K + LQ + ++ RE++I L H NI+RL
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRL 86
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA----SLARALIY 131
+FY D+ + L+L+Y + +Y+ + + YV L R+L Y
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 132 CHGKHVIHRDIKPENLLIGAQGE-LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMV-E 186
H + HRDIKP+NLL+ LK+ DFG + V +C Y PE++
Sbjct: 146 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFG 204
Query: 187 SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ ++ +++D+WS G + E L G P F D I++V + + ++ I
Sbjct: 205 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---------LGTPTREQI 255
Query: 247 SQMLVKDSSQRLPLHKLLEHPW 268
+M + + P ++ HPW
Sbjct: 256 REMNPNYTEFKFP--QIKAHPW 275
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 35/262 (13%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG VY A+ S +VA+K + LQ + ++ RE++I L H NI+RL
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRL 90
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA----SLARALIY 131
+FY D+ + L+L+Y + +Y+ + + YV L R+L Y
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 132 CHGKHVIHRDIKPENLLIGAQGE-LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMV-E 186
H + HRDIKP+NLL+ LK+ DFG + V +C Y PE++
Sbjct: 150 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFG 208
Query: 187 SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ ++ +++D+WS G + E L G P F D I++V + + ++ I
Sbjct: 209 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---------LGTPTREQI 259
Query: 247 SQMLVKDSSQRLPLHKLLEHPW 268
+M + + P ++ HPW
Sbjct: 260 REMNPNYTEFKFP--QIKAHPW 279
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 35/262 (13%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG VY A+ S +VA+K + LQ + ++ RE++I L H NI+RL
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRL 82
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA----SLARALIY 131
+FY D+ + L+L+Y + +Y+ + + YV L R+L Y
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 132 CHGKHVIHRDIKPENLLIGAQGE-LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMV-E 186
H + HRDIKP+NLL+ LK+ DFG + V +C Y PE++
Sbjct: 142 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFG 200
Query: 187 SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ ++ +++D+WS G + E L G P F D I++V + + ++ I
Sbjct: 201 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---------LGTPTREQI 251
Query: 247 SQMLVKDSSQRLPLHKLLEHPW 268
+M + + P ++ HPW
Sbjct: 252 REMNPNYTEFKFP--QIKAHPW 271
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 35/262 (13%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG VY A+ S +VA+K + LQ + ++ RE++I L H NI+RL
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRL 97
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA----SLARALIY 131
+FY D+ + L+L+Y + +Y+ + + YV L R+L Y
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 132 CHGKHVIHRDIKPENLLIGAQGE-LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMV-E 186
H + HRDIKP+NLL+ LK+ DFG + V +C Y PE++
Sbjct: 157 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFG 215
Query: 187 SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ ++ +++D+WS G + E L G P F D I++V + + ++ I
Sbjct: 216 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---------LGTPTREQI 266
Query: 247 SQMLVKDSSQRLPLHKLLEHPW 268
+M + + P ++ HPW
Sbjct: 267 REMNPNYTEFKFP--QIKAHPW 286
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 35/262 (13%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG VY A+ S +VA+K + LQ + ++ RE++I L H NI+RL
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRL 79
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA----SLARALIY 131
+FY D+ + L+L+Y + +Y+ + + YV L R+L Y
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 132 CHGKHVIHRDIKPENLLIGAQGE-LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMV-E 186
H + HRDIKP+NLL+ LK+ DFG + V +C Y PE++
Sbjct: 139 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFG 197
Query: 187 SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ ++ +++D+WS G + E L G P F D I++V + + ++ I
Sbjct: 198 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---------LGTPTREQI 248
Query: 247 SQMLVKDSSQRLPLHKLLEHPW 268
+M + + P ++ HPW
Sbjct: 249 REMNPNYTEFKFP--QIKAHPW 268
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 33/261 (12%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG VY A+ S +VA+K + LQ + ++ RE++I L H NI+RL
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRL 78
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA----SLARALIY 131
+FY D+ + L+L+Y + +Y+ + + YV L R+L Y
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 132 CHGKHVIHRDIKPENLLIGAQGE-LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMVES 187
H + HRDIKP+NLL+ LK+ DFG + V +C P + +
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 197
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
++ +++D+WS G + E L G P F D I++V + + ++ I
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---------LGTPTREQIR 248
Query: 248 QMLVKDSSQRLPLHKLLEHPW 268
+M + + P ++ HPW
Sbjct: 249 EMNPNYTEFKFP--QIKAHPW 267
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 38/247 (15%)
Query: 1 ACSEVSAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAR-------EKRSNHIVALKVLFK 51
SE E +W + +GKPLG G FG V +A + + VA+K+L
Sbjct: 18 GVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 52 SQLQQSQVEHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKEL--- 107
++ + L E+E+ + +H NI+ L G +Y+I+EYA+KG L + L
Sbjct: 78 DATEKDLSD--LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
Query: 108 ---------------QKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQ 152
++ F + + TY LAR + Y + IHRD+ N+L+
Sbjct: 136 RPPGMEXSYDINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTEN 193
Query: 153 GELKIADFGWSVHTFN---RRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-F 206
+KIADFG + N ++T G L ++ PE + + D+WS GVL +E F
Sbjct: 194 NVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 207 LYGVPPF 213
G P+
Sbjct: 254 TLGGSPY 260
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 35/262 (13%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG VY A+ S +VA+K + LQ + ++ RE++I L H NI+RL
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRL 78
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA----SLARALIY 131
+FY D+ + L+L+Y + +Y+ + + YV L R+L Y
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 132 CHGKHVIHRDIKPENLLIGAQGE-LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMV-E 186
H + HRDIKP+NLL+ LK+ DFG + V +C Y PE++
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFG 196
Query: 187 SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ ++ +++D+WS G + E L G P F D I++V + + ++ I
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---------LGTPTREQI 247
Query: 247 SQMLVKDSSQRLPLHKLLEHPW 268
+M + + P ++ HPW
Sbjct: 248 REMNPNYTEFKFP--QIKAHPW 267
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 134/313 (42%), Gaps = 65/313 (20%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
++++I + +G G +G V AR + + VA+K + + + + LR E++I H +H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKH 112
Query: 76 PNILRL---------YGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLA 126
NI+ + YG F K VY++L+ + +L++ + + + ++ L
Sbjct: 113 DNIIAIKDILRPTVPYGEF---KSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLL 168
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMC------------ 174
R L Y H VIHRD+KP NLL+ ELKI DFG + R +C
Sbjct: 169 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMA-------RGLCTSPAEHQYFMTE 221
Query: 175 --GTLDYLPPEMVESV-EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV--- 228
T Y PE++ S+ E+ +D+WS+G + E L F K + + I+ V
Sbjct: 222 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGT 281
Query: 229 -----------------DLKFPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHK 262
PP+ P A L+ +ML + S R+
Sbjct: 282 PSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAA 341
Query: 263 LLEHPWIIQNADP 275
L HP++ + DP
Sbjct: 342 ALRHPFLAKYHDP 354
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 38/247 (15%)
Query: 1 ACSEVSAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAR-------EKRSNHIVALKVLFK 51
SE E +W + +GKPLG G FG V +A + + VA+K+L
Sbjct: 18 GVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 52 SQLQQSQVEHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKEL--- 107
++ + L E+E+ + +H NI+ L G +Y+I+EYA+KG L + L
Sbjct: 78 DATEKDLSD--LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
Query: 108 ---------------QKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQ 152
++ F + + TY LAR + Y + IHRD+ N+L+
Sbjct: 136 RPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTEN 193
Query: 153 GELKIADFGWSVHTFN---RRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-F 206
+KIADFG + N ++T G L ++ PE + + D+WS GVL +E F
Sbjct: 194 NVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 207 LYGVPPF 213
G P+
Sbjct: 254 TLGGSPY 260
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 35/262 (13%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG VY A+ S +VA+K + LQ + ++ RE++I L H NI+RL
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRL 106
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA----SLARALIY 131
+FY D+ + L+L+Y + +Y+ + + YV L R+L Y
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 132 CHGKHVIHRDIKPENLLIGAQGE-LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMV-E 186
H + HRDIKP+NLL+ LK+ DFG + V +C Y PE++
Sbjct: 166 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIFG 224
Query: 187 SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ ++ +++D+WS G + E L G P F D I++V + + ++ I
Sbjct: 225 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---------LGTPTREQI 275
Query: 247 SQMLVKDSSQRLPLHKLLEHPW 268
+M + + P ++ HPW
Sbjct: 276 REMNPNYTEFKFP--QIKAHPW 295
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 136/286 (47%), Gaps = 24/286 (8%)
Query: 4 EVSAKEKKRWTLNDF-DIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQ 62
++S ++ +T D D+G+ +GRG +G V K S I+A+K + + ++ Q +
Sbjct: 10 KISPEQHWDFTAEDLKDLGE-IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLL 68
Query: 63 LRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKG--ELYKELQKC--KYFSERRA 118
+ +V ++S P I++ YG + + ++ +E + + YK + E
Sbjct: 69 MDLDVVMRSS-DCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEIL 127
Query: 119 ATYVASLARALIYC-HGKHVIHRDIKPENLLIGAQGELKIADFGWS---VHTFNRRRTMC 174
+ +AL + +IHRDIKP N+L+ G +K+ DFG S V + + R
Sbjct: 128 GKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD-A 186
Query: 175 GTLDYLPPEMVESVE----HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDL 230
G Y+ PE ++ +D D+WSLG+ YE G P+ + + + ++ QV
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY--PKWNSVFDQLTQVVK 244
Query: 231 KFPPKPI------VSSAAKDLISQMLVKDSSQRLPLHKLLEHPWII 270
PP+ S + + ++ L KD S+R +LL+HP+I+
Sbjct: 245 GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFIL 290
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 121/256 (47%), Gaps = 12/256 (4%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LGRG +G V R S I+A+K + + Q Q + ++ +++ + P + YG
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRT-VDCPFTVTFYG 73
Query: 84 YFYDQKRVYLILEY--AAKGELYKE-LQKCKYFSERRAATYVASLARALIYCHGK-HVIH 139
+ + V++ +E + + YK+ + K + E S+ +AL + H K VIH
Sbjct: 74 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIH 133
Query: 140 RDIKPENLLIGAQGELKIADFGWSVHTFN--RRRTMCGTLDYLPPEMV----ESVEHDAN 193
RD+KP N+LI A G++K+ DFG S + + + G Y+ PE + +
Sbjct: 134 RDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVK 193
Query: 194 VDIWSLGVLCYEFLYGVPPFEA-KEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVK 252
DIWSLG+ E P+++ +++V+ P S+ D SQ L K
Sbjct: 194 SDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKK 253
Query: 253 DSSQRLPLHKLLEHPW 268
+S +R +L++HP+
Sbjct: 254 NSKERPTYPELMQHPF 269
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 119/261 (45%), Gaps = 33/261 (12%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG VY A+ S +VA+K + + + ++ RE++I L H NI+RL
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-------RELQIMRKLDHCNIVRL 78
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA----SLARALIY 131
+FY D+ + L+L+Y + +Y+ + + YV L R+L Y
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 132 CHGKHVIHRDIKPENLLIGAQGE-LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMVES 187
H + HRDIKP+NLL+ LK+ DFG + V +C P + +
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 197
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
++ +++D+WS G + E L G P F D I++V + + ++ I
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---------LGTPTREQIR 248
Query: 248 QMLVKDSSQRLPLHKLLEHPW 268
+M + + P ++ HPW
Sbjct: 249 EMNPNYTEFKFP--QIKAHPW 267
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 35/262 (13%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG VY A+ S +VA+K + LQ + ++ RE++I L H NI+RL
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRL 83
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA----SLARALIY 131
+FY D+ + L+L+Y + +Y+ + + YV L R+L Y
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 132 CHGKHVIHRDIKPENLLIGAQGE-LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMV-E 186
H + HRDIKP+NLL+ LK+ DFG + V +C Y PE++
Sbjct: 143 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIFG 201
Query: 187 SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ ++ +++D+WS G + E L G P F D I++V + + ++ I
Sbjct: 202 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---------LGTPTREQI 252
Query: 247 SQMLVKDSSQRLPLHKLLEHPW 268
+M + + P ++ HPW
Sbjct: 253 REMNPNYTEFKFP--QIKAHPW 272
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 109/221 (49%), Gaps = 15/221 (6%)
Query: 12 RWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W + D + LG G++G VY K+ + VA+K L + ++ VE L+ E +
Sbjct: 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLK-EAAV 269
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVAS-LA 126
++HPN+++L G + Y+I E+ G L L++C E A Y+A+ ++
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQIS 328
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT---LDYLPP 182
A+ Y K+ IHR++ N L+G +K+ADFG S + T + G + + P
Sbjct: 329 SAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 388
Query: 183 EMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTY 222
E + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 389 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 429
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 35/262 (13%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG VY A+ S +VA+K + LQ + ++ RE++I L H NI+RL
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRL 112
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA----SLARALIY 131
+FY D+ + L+L+Y + +Y+ + + YV L R+L Y
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 132 CHGKHVIHRDIKPENLLIGAQGE-LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMV-E 186
H + HRDIKP+NLL+ LK+ DFG + V +C Y PE++
Sbjct: 172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIFG 230
Query: 187 SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ ++ +++D+WS G + E L G P F D I++V + + ++ I
Sbjct: 231 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---------LGTPTREQI 281
Query: 247 SQMLVKDSSQRLPLHKLLEHPW 268
+M + + P ++ HPW
Sbjct: 282 REMNPNYTEFKFP--QIKAHPW 301
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 35/262 (13%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG VY A+ S +VA+K + LQ + ++ RE++I L H NI+RL
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRL 91
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA----SLARALIY 131
+FY D+ + L+L+Y + +Y+ + + YV L R+L Y
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 132 CHGKHVIHRDIKPENLLIGAQGE-LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMV-E 186
H + HRDIKP+NLL+ LK+ DFG + V +C Y PE++
Sbjct: 151 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIFG 209
Query: 187 SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ ++ +++D+WS G + E L G P F D I++V + + ++ I
Sbjct: 210 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---------LGTPTREQI 260
Query: 247 SQMLVKDSSQRLPLHKLLEHPW 268
+M + + P ++ HPW
Sbjct: 261 REMNPNYTEFKFP--QIKAHPW 280
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 38/247 (15%)
Query: 1 ACSEVSAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAR-------EKRSNHIVALKVLFK 51
SE E +W + +GKPLG G FG V +A + + VA+K+L
Sbjct: 18 GVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 52 SQLQQSQVEHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKEL--- 107
++ + L E+E+ + +H NI+ L G +Y+I+EYA+KG L + L
Sbjct: 78 DATEEDLSD--LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
Query: 108 ---------------QKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQ 152
++ F + + TY LAR + Y + IHRD+ N+L+
Sbjct: 136 RPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTEN 193
Query: 153 GELKIADFGWSVHTFN---RRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-F 206
+KIADFG + N ++T G L ++ PE + + D+WS GVL +E F
Sbjct: 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 207 LYGVPPF 213
G P+
Sbjct: 254 TLGGSPY 260
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 35/262 (13%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG VY A+ S +VA+K + LQ + ++ RE++I L H NI+RL
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRL 157
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA----SLARALIY 131
+FY D+ + L+L+Y + +Y+ + + YV L R+L Y
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 132 CHGKHVIHRDIKPENLLIGAQGE-LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMV-E 186
H + HRDIKP+NLL+ LK+ DFG + V +C Y PE++
Sbjct: 217 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIFG 275
Query: 187 SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ ++ +++D+WS G + E L G P F D I++V + + ++ I
Sbjct: 276 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---------LGTPTREQI 326
Query: 247 SQMLVKDSSQRLPLHKLLEHPW 268
+M + + P ++ HPW
Sbjct: 327 REMNPNYTEFKFP--QIKAHPW 346
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 109/221 (49%), Gaps = 15/221 (6%)
Query: 12 RWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W + D + LG G++G VY K+ + VA+K L + ++ VE L+ E +
Sbjct: 211 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLK-EAAV 266
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVAS-LA 126
++HPN+++L G + Y+I E+ G L L++C E A Y+A+ ++
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 325
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT---LDYLPP 182
A+ Y K+ IHR++ N L+G +K+ADFG S + T + G + + P
Sbjct: 326 SAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 385
Query: 183 EMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTY 222
E + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 386 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 426
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 35/262 (13%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG VY A+ S +VA+K + LQ + ++ RE++I L H NI+RL
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRL 114
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA----SLARALIY 131
+FY D+ + L+L+Y + +Y+ + + YV L R+L Y
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 132 CHGKHVIHRDIKPENLLIGAQGE-LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMV-E 186
H + HRDIKP+NLL+ LK+ DFG + V +C Y PE++
Sbjct: 174 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIFG 232
Query: 187 SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ ++ +++D+WS G + E L G P F D I++V + + ++ I
Sbjct: 233 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---------LGTPTREQI 283
Query: 247 SQMLVKDSSQRLPLHKLLEHPW 268
+M + + P ++ HPW
Sbjct: 284 REMNPNYTEFKFP--QIKAHPW 303
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 35/262 (13%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG VY A+ S +VA+K + LQ + ++ RE++I L H NI+RL
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRL 116
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA----SLARALIY 131
+FY D+ + L+L+Y + +Y+ + + YV L R+L Y
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 132 CHGKHVIHRDIKPENLLIGAQGE-LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMV-E 186
H + HRDIKP+NLL+ LK+ DFG + V +C Y PE++
Sbjct: 176 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIFG 234
Query: 187 SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ ++ +++D+WS G + E L G P F D I++V + + ++ I
Sbjct: 235 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---------LGTPTREQI 285
Query: 247 SQMLVKDSSQRLPLHKLLEHPW 268
+M + + P ++ HPW
Sbjct: 286 REMNPNYTEFKFP--QIKAHPW 305
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 35/262 (13%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG VY A+ S +VA+K + LQ + ++ RE++I L H NI+RL
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRL 78
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA----SLARALIY 131
+FY D+ + L+L+Y + +Y+ + + YV L R+L Y
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 132 CHGKHVIHRDIKPENLLIGAQGE-LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMV-E 186
H + HRDIKP+NLL+ LK+ DFG + V +C Y PE++
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIFG 196
Query: 187 SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ ++ +++D+WS G + E L G P F D I++V + + ++ I
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---------LGTPTREQI 247
Query: 247 SQMLVKDSSQRLPLHKLLEHPW 268
+M + + P ++ HPW
Sbjct: 248 REMNPNYTEFKFP--QIKAHPW 267
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 127/296 (42%), Gaps = 52/296 (17%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
KP+G G G V A + + VA+K L + Q+ + R E+ + + H NI+ L
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISL 88
Query: 82 YGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
F QK VYL++E L + +Q R + + + + + H
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 145
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDAN 193
+IHRD+KP N+++ + LKI DFG + T T Y PE++ + + N
Sbjct: 146 GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 194 VDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQ-------------------------- 227
VDIWS+G + E + F +++ D + ++++
Sbjct: 206 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 265
Query: 228 -VDLKFPP-------------KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
L FP + +S A+DL+S+MLV D ++R+ + L+HP+I
Sbjct: 266 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 126/276 (45%), Gaps = 17/276 (6%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEH 61
++++ ++K + + +G LG G FG VY N VA+K + K ++ ++ +
Sbjct: 11 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 70
Query: 62 QLRREVEI----QSHLRHPNILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSER 116
R +E+ + ++RL +F LILE +L+ + + E
Sbjct: 71 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEE 130
Query: 117 RAATYVASLARALIYCHGKHVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MC 174
A ++ + A+ +CH V+HRDIK EN+LI +GELK+ DFG + T
Sbjct: 131 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 190
Query: 175 GTLDYLPPEMVESVE-HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
GT Y PPE + H + +WSLG+L Y+ + G PFE E I++ + F
Sbjct: 191 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFR 244
Query: 234 PKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ VS + LI L R ++ HPW+
Sbjct: 245 QR--VSXECQHLIRWCLALRPXDRPTFEEIQNHPWM 278
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 109/221 (49%), Gaps = 15/221 (6%)
Query: 12 RWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W + D + LG G++G VY K+ + VA+K L + ++ VE L+ E +
Sbjct: 253 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLK-EAAV 308
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT--YVAS-LA 126
++HPN+++L G + Y+I E+ G L L++C E A Y+A+ ++
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQIS 367
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGT---LDYLPP 182
A+ Y K+ IHR++ N L+G +K+ADFG S + T + G + + P
Sbjct: 368 SAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 427
Query: 183 EMVESVEHDANVDIWSLGVLCYEF-LYGVPPFEAKEHSDTY 222
E + + D+W+ GVL +E YG+ P+ + S Y
Sbjct: 428 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 468
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 134/313 (42%), Gaps = 65/313 (20%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
++++I + +G G +G V AR + + VA+K + + + + LR E++I H +H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKH 113
Query: 76 PNILRL---------YGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLA 126
NI+ + YG F K VY++L+ + +L++ + + + ++ L
Sbjct: 114 DNIIAIKDILRPTVPYGEF---KSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLL 169
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMC------------ 174
R L Y H VIHRD+KP NLL+ ELKI DFG + R +C
Sbjct: 170 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMA-------RGLCTSPAEHQYFMTE 222
Query: 175 --GTLDYLPPEMVESV-EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV--- 228
T Y PE++ S+ E+ +D+WS+G + E L F K + + I+ V
Sbjct: 223 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGT 282
Query: 229 -----------------DLKFPPK---------PIVSSAAKDLISQMLVKDSSQRLPLHK 262
PP+ P A L+ +ML + S R+
Sbjct: 283 PSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAA 342
Query: 263 LLEHPWIIQNADP 275
L HP++ + DP
Sbjct: 343 ALRHPFLAKYHDP 355
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 117/242 (48%), Gaps = 18/242 (7%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP- 76
+++ K +G+G FG V A + + + VALK++ + + Q E+ I HLR
Sbjct: 99 YEVLKVIGKGXFGQVVKAYDHKVHQHVALKMV----RNEKRFHRQAAEEIRILEHLRKQD 154
Query: 77 -----NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY--FSERRAATYVASLARAL 129
N++ + F + + + E + LY+ ++K K+ FS + S+ + L
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGE--LKIADFGWSVHTFNRRRTMCGTLDYLPPEMVES 187
H +IH D+KPEN+L+ QG +K+ DFG S + R + Y PE++
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILG 273
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA--AKDL 245
+ +D+WSLG + E L G P ++ D ++++ L P + ++ ++ AK+
Sbjct: 274 ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL-LGMPXQKLLDASKRAKNF 332
Query: 246 IS 247
+S
Sbjct: 333 VS 334
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 38/247 (15%)
Query: 1 ACSEVSAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAR-------EKRSNHIVALKVLFK 51
SE E +W + +GKPLG G FG V +A + + VA+K+L
Sbjct: 18 GVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 52 SQLQQSQVEHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKEL--- 107
++ + L E+E+ + +H NI+ L G +Y+I+EYA+KG L + L
Sbjct: 78 DATEKDLSD--LVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
Query: 108 ---------------QKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQ 152
++ F + + TY LAR + Y + IHRD+ N+L+
Sbjct: 136 RPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTEN 193
Query: 153 GELKIADFGWSVHTFN---RRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-F 206
+KIADFG + N ++T G L ++ PE + + D+WS GVL +E F
Sbjct: 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 207 LYGVPPF 213
G P+
Sbjct: 254 TLGGSPY 260
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 33/261 (12%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG VY A+ S +VA+K + + + ++ RE++I L H NI+RL
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-------RELQIMRKLDHCNIVRL 78
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA----SLARALIY 131
+FY D+ + L+L+Y +Y+ + + YV L R+L Y
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 132 CHGKHVIHRDIKPENLLIGAQGE-LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMVES 187
H + HRDIKP+NLL+ LK+ DFG + V +C P + +
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 197
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
++ +++D+WS G + E L G P F D I++V + + ++ I
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---------LGTPTREQIR 248
Query: 248 QMLVKDSSQRLPLHKLLEHPW 268
+M + P ++ HPW
Sbjct: 249 EMNPNYTEFAFP--QIKAHPW 267
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 38/247 (15%)
Query: 1 ACSEVSAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAR-------EKRSNHIVALKVLFK 51
SE E +W + +GKPLG G FG V +A + + VA+K+L
Sbjct: 18 GVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 52 SQLQQSQVEHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKEL--- 107
++ + L E+E+ + +H NI+ L G +Y+I+EYA+KG L + L
Sbjct: 78 DATEKDLSD--LVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
Query: 108 ---------------QKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQ 152
++ F + + TY LAR + Y + IHRD+ N+L+
Sbjct: 136 RPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTEN 193
Query: 153 GELKIADFGWSVHTFN---RRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-F 206
+KIADFG + N ++T G L ++ PE + + D+WS GVL +E F
Sbjct: 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 207 LYGVPPF 213
G P+
Sbjct: 254 TLGGSPY 260
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 122/262 (46%), Gaps = 35/262 (13%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG VY A+ S +VA+K + LQ + ++ RE++I L H NI+RL
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKN---RELQIMRKLDHCNIVRL 78
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA----SLARALIY 131
+FY D + L+L+Y + +Y+ + + YV L R+L Y
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 132 CHGKHVIHRDIKPENLLIGAQGE-LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMV-E 186
H + HRDIKP+NLL+ LK+ DFG + V +C Y PE++
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFG 196
Query: 187 SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ ++ +++D+WS G + E L G P F D I++V + + ++ I
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---------LGTPTREQI 247
Query: 247 SQMLVKDSSQRLPLHKLLEHPW 268
+M + + P ++ HPW
Sbjct: 248 REMNPNYTEFKFP--QIKAHPW 267
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 110/247 (44%), Gaps = 38/247 (15%)
Query: 1 ACSEVSAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAR-------EKRSNHIVALKVLFK 51
SE E +W + +GKPLG G FG V +A + + VA+K+L
Sbjct: 18 GVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 52 SQLQQSQVEHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKEL--- 107
++ + L E+E+ + +H NI+ L G +Y+I+EYA+KG L + L
Sbjct: 78 DATEKDLSD--LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
Query: 108 ---------------QKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQ 152
++ F + + TY LAR + Y + IHRD+ N+L+
Sbjct: 136 RPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTEN 193
Query: 153 GELKIADFGWSVHTFN---RRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-F 206
+KIADFG + N + T G L ++ PE + + D+WS GVL +E F
Sbjct: 194 NVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 207 LYGVPPF 213
G P+
Sbjct: 254 TLGGSPY 260
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 38/247 (15%)
Query: 1 ACSEVSAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAR-------EKRSNHIVALKVLFK 51
SE E +W + +GKPLG G FG V +A + + VA+K+L
Sbjct: 64 GVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 123
Query: 52 SQLQQSQVEHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKEL--- 107
++ + L E+E+ + +H NI+ L G +Y+I+EYA+KG L + L
Sbjct: 124 DATEKDLSD--LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 181
Query: 108 ---------------QKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQ 152
++ F + + TY LAR + Y + IHRD+ N+L+
Sbjct: 182 RPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTEN 239
Query: 153 GELKIADFGWSVHTFN---RRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-F 206
+KIADFG + N ++T G L ++ PE + + D+WS GVL +E F
Sbjct: 240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 299
Query: 207 LYGVPPF 213
G P+
Sbjct: 300 TLGGSPY 306
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 108/246 (43%), Gaps = 36/246 (14%)
Query: 1 ACSEVSAKEKKRWTL--NDFDIGKPLGRGKFGHVYLA------REKRSNHIVALKVLFKS 52
SE E +W + +GKPLG G FG V +A ++K + + K
Sbjct: 10 GVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 69
Query: 53 QLQQSQVEHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKEL---- 107
+ + L E+E+ + +H NI+ L G +Y+I+EYA+KG L + L
Sbjct: 70 DATEKDL-SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR 128
Query: 108 --------------QKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQG 153
++ F + + TY LAR + Y + IHRD+ N+L+
Sbjct: 129 PPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENN 186
Query: 154 ELKIADFGWSVHTFN---RRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-FL 207
+KIADFG + N ++T G L ++ PE + + D+WS GVL +E F
Sbjct: 187 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
Query: 208 YGVPPF 213
G P+
Sbjct: 247 LGGSPY 252
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 38/247 (15%)
Query: 1 ACSEVSAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAR-------EKRSNHIVALKVLFK 51
SE E +W + +GKPLG G FG V +A + + VA+K+L
Sbjct: 5 GVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 64
Query: 52 SQLQQSQVEHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKEL--- 107
++ + L E+E+ + +H NI+ L G +Y+I+EYA+KG L + L
Sbjct: 65 DATEKDLSD--LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 122
Query: 108 ---------------QKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQ 152
++ F + + TY LAR + Y + IHRD+ N+L+
Sbjct: 123 RPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLTARNVLVTEN 180
Query: 153 GELKIADFGWSVHTFN---RRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-F 206
+KIADFG + N ++T G L ++ PE + + D+WS GVL +E F
Sbjct: 181 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 240
Query: 207 LYGVPPF 213
G P+
Sbjct: 241 TLGGSPY 247
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 38/247 (15%)
Query: 1 ACSEVSAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAR-------EKRSNHIVALKVLFK 51
SE E +W + +GKPLG G FG V +A + + VA+K+L
Sbjct: 7 GVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 66
Query: 52 SQLQQSQVEHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKEL--- 107
++ + L E+E+ + +H NI+ L G +Y+I+EYA+KG L + L
Sbjct: 67 DATEKDLSD--LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 124
Query: 108 ---------------QKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQ 152
++ F + + TY LAR + Y + IHRD+ N+L+
Sbjct: 125 RPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTEN 182
Query: 153 GELKIADFGWSVHTFN---RRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-F 206
+KIADFG + N ++T G L ++ PE + + D+WS GVL +E F
Sbjct: 183 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 242
Query: 207 LYGVPPF 213
G P+
Sbjct: 243 TLGGSPY 249
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 33/261 (12%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K +G G FG VY A+ S +VA+K + + + ++ RE++I L H NI+RL
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-------RELQIMRKLDHCNIVRL 78
Query: 82 YGYFY------DQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVA----SLARALIY 131
+FY D+ + L+L+Y + +Y+ + + YV L R+L Y
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 132 CHGKHVIHRDIKPENLLIGAQGE-LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMVES 187
H + HRDIKP+NLL+ LK+ DFG + V +C P + +
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 197
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
++ +++D+WS G + E L G P F D I++V + + ++ I
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV---------LGTPTREQIR 248
Query: 248 QMLVKDSSQRLPLHKLLEHPW 268
+M + P ++ HPW
Sbjct: 249 EMNPNYTEFAFP--QIKAHPW 267
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 38/247 (15%)
Query: 1 ACSEVSAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAR-------EKRSNHIVALKVLFK 51
SE E +W + +GKPLG G FG V +A + + VA+K+L
Sbjct: 18 GVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 52 SQLQQSQVEHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKEL--- 107
++ + L E+E+ + +H NI+ L G +Y+I+EYA+KG L + L
Sbjct: 78 DATEKDLSD--LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
Query: 108 ---------------QKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQ 152
++ F + + TY LAR + Y + IHRD+ N+L+
Sbjct: 136 RPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTEN 193
Query: 153 GELKIADFGWSVHTFN---RRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-F 206
++IADFG + N ++T G L ++ PE + + D+WS GVL +E F
Sbjct: 194 NVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 207 LYGVPPF 213
G P+
Sbjct: 254 TLGGSPY 260
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 114/266 (42%), Gaps = 39/266 (14%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ-SQVEHQLRREVEIQSHLRHPNILRLY 82
+G G FG VY R VA+K + SQ +R+E ++ + L+HPNI+ L
Sbjct: 15 IGIGGFGKVY--RAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 83 GYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKH---VIH 139
G + + L++E+A G L + L K + +AR + Y H + +IH
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEAIVPIIH 131
Query: 140 RDIKPENLLIGAQGE--------LKIADFGWSVHTFNRRRTM--CGTLDYLPPEMVESVE 189
RD+K N+LI + E LKI DFG + ++R M G ++ PE++ +
Sbjct: 132 RDLKSSNILILQKVENGDLSNKILKITDFGLA-REWHRTTKMSAAGAYAWMAPEVIRASM 190
Query: 190 HDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQM 249
D+WS GVL +E L G PF + + L PI S+ +
Sbjct: 191 FSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLAL---PIPSTCPE------ 241
Query: 250 LVKDSSQRLPLHKLLEHPWIIQNADP 275
P KL+E W N DP
Sbjct: 242 ---------PFAKLMEDCW---NPDP 255
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 104/230 (45%), Gaps = 27/230 (11%)
Query: 22 KPLGRGKFGHVYLAR-----EKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
+ LG G FG V+LA ++ +VA+K L + RE E+ ++L+H
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQHE 75
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQ----KCKYFSERRAATYVAS-------- 124
+I++ YG + + ++ EY G+L K L+ +E T +
Sbjct: 76 HIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 125 -LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT-----LD 178
+A ++Y +H +HRD+ N L+G +KI DFG S ++ G +
Sbjct: 136 QIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 195
Query: 179 YLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQ 227
++PPE + + D+WSLGV+ +E F YG P+ +++ I Q
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ 245
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 21/250 (8%)
Query: 7 AKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLF--KSQLQQSQVEHQL- 63
K ++W ++ ++I +G+G FG V A ++ VA+K++ K+ L Q+Q+E +L
Sbjct: 46 VKNGEKW-MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLL 104
Query: 64 ----RREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY--FSERR 117
+ + E++ ++ H L +F + + L+ E + LY L+ + S
Sbjct: 105 ELMNKHDTEMKYYIVH-----LKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNL 158
Query: 118 AATYVASLARALIYCHGKH--VIHRDIKPENLLIG--AQGELKIADFGWSVHTFNRRRTM 173
+ + AL++ +IH D+KPEN+L+ + +KI DFG S R
Sbjct: 159 TRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQX 218
Query: 174 CGTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
+ Y PE++ + +D +D+WSLG + E G P F D +IV+V L P
Sbjct: 219 IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEV-LGIP 277
Query: 234 PKPIVSSAAK 243
P I+ A K
Sbjct: 278 PAHILDQAPK 287
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 21/250 (8%)
Query: 7 AKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLF--KSQLQQSQVEHQL- 63
K ++W ++ ++I +G+G FG V A ++ VA+K++ K+ L Q+Q+E +L
Sbjct: 27 VKNGEKW-MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLL 85
Query: 64 ----RREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY--FSERR 117
+ + E++ ++ H L +F + + L+ E + LY L+ + S
Sbjct: 86 ELMNKHDTEMKYYIVH-----LKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNL 139
Query: 118 AATYVASLARALIYCHGKH--VIHRDIKPENLLIG--AQGELKIADFGWSVHTFNRRRTM 173
+ + AL++ +IH D+KPEN+L+ + +KI DFG S R
Sbjct: 140 TRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQX 199
Query: 174 CGTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
+ Y PE++ + +D +D+WSLG + E G P F D +IV+V L P
Sbjct: 200 IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEV-LGIP 258
Query: 234 PKPIVSSAAK 243
P I+ A K
Sbjct: 259 PAHILDQAPK 268
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 11/210 (5%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
+ +G G+FG V+L + KV K+ + S E E E+ L HP +++L
Sbjct: 33 QEIGSGQFGLVHLGYWLNKD-----KVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQL 87
Query: 82 YGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHGKHVIHR 140
YG +Q + L+ E+ G L L+ + F+ + + Y VIHR
Sbjct: 88 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 147
Query: 141 DIKPENLLIGAQGELKIADFGWSVHTFNRRRT-MCGT---LDYLPPEMVESVEHDANVDI 196
D+ N L+G +K++DFG + + + T GT + + PE+ + + D+
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 197 WSLGVLCYE-FLYGVPPFEAKEHSDTYRRI 225
WS GVL +E F G P+E + +S+ I
Sbjct: 208 WSFGVLMWEVFSEGKIPYENRSNSEVVEDI 237
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 31/231 (13%)
Query: 24 LGRGKFGHVYLAR-----EKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNI 78
LG G FG V+LA ++ +VA+K L ++ Q +RE E+ + L+H +I
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ---DFQREAELLTMLQHQHI 82
Query: 79 LRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAA---------------TYVA 123
+R +G + + + ++ EY G+L + L+ ++ A +
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 124 SLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRR------RTMCGTL 177
+A ++Y G H +HRD+ N L+G +KI DFG S ++ RTM +
Sbjct: 143 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML-PI 201
Query: 178 DYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQ 227
++PPE + + D+WS GV+ +E F YG P+ +++ I Q
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ 252
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 11/210 (5%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
+ +G G+FG V+L + KV K+ + + E E E+ L HP +++L
Sbjct: 13 QEIGSGQFGLVHLGYWLNKD-----KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQL 67
Query: 82 YGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHGKHVIHR 140
YG +Q + L+ E+ G L L+ + F+ + + Y VIHR
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHR 127
Query: 141 DIKPENLLIGAQGELKIADFGWSVHTFNRRRT-MCGT---LDYLPPEMVESVEHDANVDI 196
D+ N L+G +K++DFG + + + T GT + + PE+ + + D+
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 197 WSLGVLCYE-FLYGVPPFEAKEHSDTYRRI 225
WS GVL +E F G P+E + +S+ I
Sbjct: 188 WSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 31/231 (13%)
Query: 24 LGRGKFGHVYLAR-----EKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNI 78
LG G FG V+LA ++ +VA+K L ++ Q +RE E+ + L+H +I
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ---DFQREAELLTMLQHQHI 105
Query: 79 LRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAA---------------TYVA 123
+R +G + + + ++ EY G+L + L+ ++ A +
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 124 SLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRR------RTMCGTL 177
+A ++Y G H +HRD+ N L+G +KI DFG S ++ RTM +
Sbjct: 166 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML-PI 224
Query: 178 DYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQ 227
++PPE + + D+WS GV+ +E F YG P+ +++ I Q
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ 275
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 122/284 (42%), Gaps = 38/284 (13%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLR--REVEIQSHLR---HPNI 78
+G G +G VY AR+ S H VALK + + REV + L HPN+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 79 LRLYGYFYDQK-----RVYLILEYAAKG-ELYKELQKCKYFSERRAATYVASLARALIYC 132
+RL + +V L+ E+ + Y + + R L +
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 136
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRT-MCGTLDYLPPEMVESVEH 190
H ++HRD+KPEN+L+ + G +K+ADFG + ++++ T + TL Y PE++ +
Sbjct: 137 HANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTY 196
Query: 191 DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----------DLKFP------ 233
VD+WS+G + E P F +D +I + D+ P
Sbjct: 197 ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPP 256
Query: 234 --PKPIVS------SAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
P+P+ S + L+ +ML + +R+ + L+H ++
Sbjct: 257 RGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 31/231 (13%)
Query: 24 LGRGKFGHVYLAR-----EKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNI 78
LG G FG V+LA ++ +VA+K L ++ Q +RE E+ + L+H +I
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ---DFQREAELLTMLQHQHI 76
Query: 79 LRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAA---------------TYVA 123
+R +G + + + ++ EY G+L + L+ ++ A +
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 124 SLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRR------RTMCGTL 177
+A ++Y G H +HRD+ N L+G +KI DFG S ++ RTM +
Sbjct: 137 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML-PI 195
Query: 178 DYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQ 227
++PPE + + D+WS GV+ +E F YG P+ +++ I Q
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ 246
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 110/247 (44%), Gaps = 38/247 (15%)
Query: 1 ACSEVSAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAR-------EKRSNHIVALKVLFK 51
SE E +W + +GKPLG G FG V +A + + VA+K+L
Sbjct: 18 GVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 52 SQLQQSQVEHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKEL--- 107
++ + L E+E+ + +H NI+ L G +Y+I+ YA+KG L + L
Sbjct: 78 DATEKDLSD--LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRAR 135
Query: 108 ---------------QKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQ 152
++ F + + TY LAR + Y + IHRD+ N+L+
Sbjct: 136 RPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTEN 193
Query: 153 GELKIADFGWSVHTFN---RRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-F 206
+KIADFG + N ++T G L ++ PE + + D+WS GVL +E F
Sbjct: 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 207 LYGVPPF 213
G P+
Sbjct: 254 TLGGSPY 260
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 13/222 (5%)
Query: 12 RWTLN--DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W ++ + + +G G+FG V+L + KV K+ + + E E E+
Sbjct: 4 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKD-----KVAIKTIREGAMSEEDFIEEAEV 58
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARA 128
L HP +++LYG +Q + L+ E+ G L L+ + F+ +
Sbjct: 59 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG 118
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT-MCGT---LDYLPPEM 184
+ Y VIHRD+ N L+G +K++DFG + + + T GT + + PE+
Sbjct: 119 MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 178
Query: 185 VESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRI 225
+ + D+WS GVL +E F G P+E + +S+ I
Sbjct: 179 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 220
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 103/243 (42%), Gaps = 37/243 (15%)
Query: 24 LGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEH--QLRREVEIQSHLRHPN 77
LG+G FG V + R + + +VA+K +LQ S EH RE+EI L+H N
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 78 ILRLYGYFYDQKR--VYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHG 134
I++ G Y R + LI+EY G L LQK K + Y + + + + Y
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVESV 188
K IHRD+ N+L+ + +KI DFG + F + + + PE +
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES 192
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
+ D+WS GV+ YE F E S K PP + D Q
Sbjct: 193 KFSVASDVWSFGVVLYEL------FTYIEKS-----------KSPPAEFMRMIGNDKQGQ 235
Query: 249 MLV 251
M+V
Sbjct: 236 MIV 238
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 125/274 (45%), Gaps = 29/274 (10%)
Query: 18 FDIGKPLGRGKFGHVY-LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH- 75
+ I K +G G V+ + EK+ I A+K + + +Q R E+ + L+
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQH 70
Query: 76 -PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
I+RLY Y + +Y+++E +L L+K K +Y ++ A+ H
Sbjct: 71 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 129
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWSVH-----TFNRRRTMCGTLDYLPPEMVESVE 189
++H D+KP N LI G LK+ DFG + T + + GT++Y+PPE ++ +
Sbjct: 130 HGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 188
Query: 190 HD-----------ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV---QVDLKFPPK 235
D+WSLG + Y YG PF+ + + + +++FP
Sbjct: 189 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 248
Query: 236 PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
P +D++ L +D QR+ + +LL HP++
Sbjct: 249 P--EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 280
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 12/213 (5%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K LG G+FG V++ S VA+K L + E + L+H ++RL
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSV----QAFLEEANLMKTLQHDKLVRL 73
Query: 82 YGYFYDQKRVYLILEYAAKGELYKELQ--KCKYFSERRAATYVASLARALIYCHGKHVIH 139
Y ++ +Y+I EY AKG L L+ + + + A +A + Y K+ IH
Sbjct: 74 YAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIH 133
Query: 140 RDIKPENLLIGAQGELKIADFGWS----VHTFNRRRTMCGTLDYLPPEMVESVEHDANVD 195
RD++ N+L+ KIADFG + + + R + + PE + D
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSD 193
Query: 196 IWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQ 227
+WS G+L YE + YG P+ + ++D + Q
Sbjct: 194 VWSFGILLYEIVTYGKIPYPGRTNADVMTALSQ 226
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 21/250 (8%)
Query: 7 AKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLF--KSQLQQSQVEHQL- 63
K ++W ++ ++I +G+G FG V A ++ VA+K++ K+ L Q+Q+E +L
Sbjct: 46 VKNGEKW-MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLL 104
Query: 64 ----RREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY--FSERR 117
+ + E++ ++ H L +F + + L+ E + LY L+ + S
Sbjct: 105 ELMNKHDTEMKYYIVH-----LKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNL 158
Query: 118 AATYVASLARALIYCHGKH--VIHRDIKPENLLIG--AQGELKIADFGWSVHTFNRRRTM 173
+ + AL++ +IH D+KPEN+L+ + +KI DFG S R
Sbjct: 159 TRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQX 218
Query: 174 CGTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
+ Y PE++ + +D +D+WSLG + E G P F D +IV+V L P
Sbjct: 219 IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEV-LGIP 277
Query: 234 PKPIVSSAAK 243
P I+ A K
Sbjct: 278 PAHILDQAPK 287
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 125/274 (45%), Gaps = 29/274 (10%)
Query: 18 FDIGKPLGRGKFGHVY-LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH- 75
+ I K +G G V+ + EK+ I A+K + + +Q R E+ + L+
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQH 67
Query: 76 -PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
I+RLY Y + +Y+++E +L L+K K +Y ++ A+ H
Sbjct: 68 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 126
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWSVH-----TFNRRRTMCGTLDYLPPEMVESVE 189
++H D+KP N LI G LK+ DFG + T + + GT++Y+PPE ++ +
Sbjct: 127 HGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 185
Query: 190 HD-----------ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV---QVDLKFPPK 235
D+WSLG + Y YG PF+ + + + +++FP
Sbjct: 186 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 245
Query: 236 PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
P +D++ L +D QR+ + +LL HP++
Sbjct: 246 P--EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 277
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 125/274 (45%), Gaps = 29/274 (10%)
Query: 18 FDIGKPLGRGKFGHVY-LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH- 75
+ I K +G G V+ + EK+ I A+K + + +Q R E+ + L+
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQH 86
Query: 76 -PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
I+RLY Y + +Y+++E +L L+K K +Y ++ A+ H
Sbjct: 87 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWSVH-----TFNRRRTMCGTLDYLPPEMVESVE 189
++H D+KP N LI G LK+ DFG + T + + GT++Y+PPE ++ +
Sbjct: 146 HGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 204
Query: 190 HD-----------ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV---QVDLKFPPK 235
D+WSLG + Y YG PF+ + + + +++FP
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 264
Query: 236 PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
P +D++ L +D QR+ + +LL HP++
Sbjct: 265 P--EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 125/274 (45%), Gaps = 29/274 (10%)
Query: 18 FDIGKPLGRGKFGHVY-LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH- 75
+ I K +G G V+ + EK+ I A+K + + +Q R E+ + L+
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQH 66
Query: 76 -PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
I+RLY Y + +Y+++E +L L+K K +Y ++ A+ H
Sbjct: 67 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 125
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWSVH-----TFNRRRTMCGTLDYLPPEMVESVE 189
++H D+KP N LI G LK+ DFG + T + + GT++Y+PPE ++ +
Sbjct: 126 HGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 184
Query: 190 HD-----------ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV---QVDLKFPPK 235
D+WSLG + Y YG PF+ + + + +++FP
Sbjct: 185 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 244
Query: 236 PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
P +D++ L +D QR+ + +LL HP++
Sbjct: 245 P--EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 276
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 125/274 (45%), Gaps = 29/274 (10%)
Query: 18 FDIGKPLGRGKFGHVY-LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH- 75
+ I K +G G V+ + EK+ I A+K + + +Q R E+ + L+
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQH 114
Query: 76 -PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
I+RLY Y + +Y+++E +L L+K K +Y ++ A+ H
Sbjct: 115 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWSVH-----TFNRRRTMCGTLDYLPPEMVESVE 189
++H D+KP N LI G LK+ DFG + T + + GT++Y+PPE ++ +
Sbjct: 174 HGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 190 HD-----------ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV---QVDLKFPPK 235
D+WSLG + Y YG PF+ + + + +++FP
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 292
Query: 236 PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
P +D++ L +D QR+ + +LL HP++
Sbjct: 293 P--EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 110/247 (44%), Gaps = 38/247 (15%)
Query: 1 ACSEVSAKEKKRWTL--NDFDIGKPLGRGKFGHVYLAR-------EKRSNHIVALKVLFK 51
SE E +W + +GKPLG G FG V +A + + VA+K+L
Sbjct: 18 GVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 77
Query: 52 SQLQQSQVEHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKEL--- 107
++ + L E+E+ + +H NI+ L G +Y+I+ YA+KG L + L
Sbjct: 78 DATEKDLSD--LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRAR 135
Query: 108 ---------------QKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQ 152
++ F + + TY LAR + Y + IHRD+ N+L+
Sbjct: 136 RPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTEN 193
Query: 153 GELKIADFGWSVHTFN---RRRTMCGTL--DYLPPEMVESVEHDANVDIWSLGVLCYE-F 206
+KIADFG + N ++T G L ++ PE + + D+WS GVL +E F
Sbjct: 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 207 LYGVPPF 213
G P+
Sbjct: 254 TLGGSPY 260
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 11/210 (5%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
+ +G G+FG V+L + KV K+ + + E E E+ L HP +++L
Sbjct: 11 QEIGSGQFGLVHLGYWLNKD-----KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQL 65
Query: 82 YGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHGKHVIHR 140
YG +Q + L+ E+ G L L+ + F+ + + Y VIHR
Sbjct: 66 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 125
Query: 141 DIKPENLLIGAQGELKIADFGWSVHTFNRRRT-MCGT---LDYLPPEMVESVEHDANVDI 196
D+ N L+G +K++DFG + + + T GT + + PE+ + + D+
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 185
Query: 197 WSLGVLCYE-FLYGVPPFEAKEHSDTYRRI 225
WS GVL +E F G P+E + +S+ I
Sbjct: 186 WSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 11/210 (5%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
+ +G G+FG V+L + KV K+ + + E E E+ L HP +++L
Sbjct: 13 QEIGSGQFGLVHLGYWLNKD-----KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQL 67
Query: 82 YGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHGKHVIHR 140
YG +Q + L+ E+ G L L+ + F+ + + Y VIHR
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 127
Query: 141 DIKPENLLIGAQGELKIADFGWSVHTFNRRRT-MCGT---LDYLPPEMVESVEHDANVDI 196
D+ N L+G +K++DFG + + + T GT + + PE+ + + D+
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 197 WSLGVLCYE-FLYGVPPFEAKEHSDTYRRI 225
WS GVL +E F G P+E + +S+ I
Sbjct: 188 WSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 37/282 (13%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR---HPNILR 80
+G G +G VY AR+ S H VALK + + + + REV + L HPN++R
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 81 LYGYFYDQK-----RVYLILEYAAKG-ELYKELQKCKYFSERRAATYVASLARALIYCHG 134
L + +V L+ E+ + Y + + R L + H
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRR-RTMCGTLDYLPPEMVESVEHDA 192
++HRD+KPEN+L+ + G +K+ADFG + ++++ + TL Y PE++ +
Sbjct: 131 NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYAT 190
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----------DLKFP-------- 233
VD+WS+G + E P F +D +I + D+ P
Sbjct: 191 PVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRG 250
Query: 234 PKPIVS------SAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
P+P+ S + L+ +ML + +R+ + L+H ++
Sbjct: 251 PRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 22/228 (9%)
Query: 13 WTLND--FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W + D +G+ +G G FG VY + + + VA+K+L + Q++ + EV +
Sbjct: 7 WEIPDGQITVGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVL 62
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARAL 129
RH NIL GY + ++ ++ ++ LY L + F ++ AR +
Sbjct: 63 RKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGM 121
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFG-------WS-VHTFNRRRTMCGTLDYLP 181
Y H K +IHRD+K N+ + +KI DFG WS H F + + G++ ++
Sbjct: 122 DYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQ---LSGSILWMA 178
Query: 182 PEMV---ESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV 226
PE++ +S + D+++ G++ YE + G P+ + D +V
Sbjct: 179 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 226
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 37/282 (13%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR---HPNILR 80
+G G +G VY AR+ S H VALK + + + + REV + L HPN++R
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 81 LYGYFYDQK-----RVYLILEYAAKG-ELYKELQKCKYFSERRAATYVASLARALIYCHG 134
L + +V L+ E+ + Y + + R L + H
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRR-RTMCGTLDYLPPEMVESVEHDA 192
++HRD+KPEN+L+ + G +K+ADFG + ++++ + TL Y PE++ +
Sbjct: 131 NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYAT 190
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----------DLKFP-------- 233
VD+WS+G + E P F +D +I + D+ P
Sbjct: 191 PVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRG 250
Query: 234 PKPIVS------SAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
P+P+ S + L+ +ML + +R+ + L+H ++
Sbjct: 251 PRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 131/289 (45%), Gaps = 42/289 (14%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+DF+ LG+G FG V AR + A+K + ++ + S + EV + + L H
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI----LSEVMLLASLNH 61
Query: 76 PNILRLYGYFYDQKR-------------VYLILEYAAKGELYKELQKCKYFSERRAATY- 121
++R Y + +++ +++ +EY G LY +L + +++R +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLY-DLIHSENLNQQRDEYWR 120
Query: 122 -VASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS--VH------------- 165
+ AL Y H + +IHRD+KP N+ I +KI DFG + VH
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 166 --TFNRRRTMCGTLDYLPPEMVESVEH-DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTY 222
+ + + GT Y+ E+++ H + +D++SLG++ +E +Y P E +
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERVNIL 238
Query: 223 RRIVQVDLKFPP--KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+++ V ++FPP K +I ++ D ++R LL W+
Sbjct: 239 KKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 13/222 (5%)
Query: 12 RWTLN--DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI 69
+W ++ + + +G G+FG V+L + KV K+ + + E E E+
Sbjct: 2 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKD-----KVAIKTIREGAMSEEDFIEEAEV 56
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARA 128
L HP +++LYG +Q + L+ E+ G L L+ + F+ +
Sbjct: 57 MMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG 116
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT-MCGT---LDYLPPEM 184
+ Y VIHRD+ N L+G +K++DFG + + + T GT + + PE+
Sbjct: 117 MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 176
Query: 185 VESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRI 225
+ + D+WS GVL +E F G P+E + +S+ I
Sbjct: 177 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 17/263 (6%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
FDI +GRG F VY + + VA L +L +S+ + + E E L+HPN
Sbjct: 30 FDI--EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSE-RQRFKEEAEXLKGLQHPN 86
Query: 78 ILRLYGYFYD----QKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
I+R Y + +K + L+ E G L L++ K + ++ + + L + H
Sbjct: 87 IVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLH 146
Query: 134 GKH--VIHRDIKPENLLI-GAQGELKIADFGWSVHTFNR---RRTMCGTLDYLPPEMVES 187
+ +IHRD+K +N+ I G G +KI D G + T R + + GT ++ PE E
Sbjct: 147 TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA--TLKRASFAKAVIGTPEFXAPEXYEE 204
Query: 188 VEHDANVDIWSLGVLCYEFLYGVPPF-EAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
++D +VD+++ G E P+ E + + YRR+ + K++I
Sbjct: 205 -KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEII 263
Query: 247 SQMLVKDSSQRLPLHKLLEHPWI 269
+ ++ +R + LL H +
Sbjct: 264 EGCIRQNKDERYSIKDLLNHAFF 286
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 125/274 (45%), Gaps = 29/274 (10%)
Query: 18 FDIGKPLGRGKFGHVY-LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH- 75
+ I K +G G V+ + EK+ I A+K + + +Q R E+ + L+
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQH 114
Query: 76 -PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
I+RLY Y + +Y+++E +L L+K K +Y ++ A+ H
Sbjct: 115 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWSVH-----TFNRRRTMCGTLDYLPPEMVESVE 189
++H D+KP N LI G LK+ DFG + T + + GT++Y+PPE ++ +
Sbjct: 174 HGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 190 HD-----------ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV---QVDLKFPPK 235
D+WSLG + Y YG PF+ + + + +++FP
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 292
Query: 236 PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
P +D++ L +D QR+ + +LL HP++
Sbjct: 293 P--EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 22/228 (9%)
Query: 13 WTLND--FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W + D +G+ +G G FG VY + + + VA+K+L + Q++ + EV +
Sbjct: 19 WEIPDGQITVGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVL 74
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARAL 129
RH NIL GY + ++ ++ ++ LY L + F ++ AR +
Sbjct: 75 RKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGM 133
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFG-------WS-VHTFNRRRTMCGTLDYLP 181
Y H K +IHRD+K N+ + +KI DFG WS H F + + G++ ++
Sbjct: 134 DYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ---LSGSILWMA 190
Query: 182 PEMV---ESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV 226
PE++ +S + D+++ G++ YE + G P+ + D +V
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 37/282 (13%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR---HPNILR 80
+G G +G VY AR+ S H VALK + + + + REV + L HPN++R
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 81 LYGYFYDQK-----RVYLILEYAAKG-ELYKELQKCKYFSERRAATYVASLARALIYCHG 134
L + +V L+ E+ + Y + + R L + H
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRR-TMCGTLDYLPPEMVESVEHDA 192
++HRD+KPEN+L+ + G +K+ADFG + ++++ + TL Y PE++ +
Sbjct: 131 NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYAT 190
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-----------DLKFP-------- 233
VD+WS+G + E P F +D +I + D+ P
Sbjct: 191 PVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRG 250
Query: 234 PKPIVS------SAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
P+P+ S + L+ +ML + +R+ + L+H ++
Sbjct: 251 PRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 27/268 (10%)
Query: 13 WTLN--DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W LN + + + +G+G+FG V L + R N VA+K + Q+ E +
Sbjct: 188 WALNMKELKLLQTIGKGEFGDVMLG-DYRGNK-VAVKCIKNDATAQA-----FLAEASVM 240
Query: 71 SHLRHPNILRLYGYFYDQKR-VYLILEYAAKGELYKELQKCKYFSERRAA-------TYV 122
+ LRH N+++L G ++K +Y++ EY AKG L L+ S R+ +
Sbjct: 241 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-----SRGRSVLGGDCLLKFS 295
Query: 123 ASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPP 182
+ A+ Y G + +HRD+ N+L+ K++DFG + + + T + + P
Sbjct: 296 LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP 355
Query: 183 EMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA 241
E + + D+WS G+L +E + +G P+ D R V+ K A
Sbjct: 356 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-VEKGYKMDAPDGCPPA 414
Query: 242 AKDLISQMLVKDSSQR---LPLHKLLEH 266
D++ D++ R L L + LEH
Sbjct: 415 VYDVMKNCWHLDAATRPTFLQLREQLEH 442
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 26/270 (9%)
Query: 13 WTLND--FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W + D +G+ +G G FG VY + + + VA+K+L + Q++ + EV +
Sbjct: 19 WEIPDGQITVGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVL 74
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARAL 129
RH NIL GY ++ ++ ++ LY L + F ++ AR +
Sbjct: 75 RKTRHVNILLFMGY-STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGM 133
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFG-------WS-VHTFNRRRTMCGTLDYLP 181
Y H K +IHRD+K N+ + +KI DFG WS H F + + G++ ++
Sbjct: 134 DYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ---LSGSILWMA 190
Query: 182 PEMV---ESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIV 238
PE++ +S + D+++ G++ YE + G P+ + D +V P V
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKV 250
Query: 239 SSAA----KDLISQMLVKDSSQRLPLHKLL 264
S K L+++ L K +R ++L
Sbjct: 251 RSNCPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 23/224 (10%)
Query: 13 WTLN--DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W LN + + + +G+G+FG V L + R N VA+K + Q+ E +
Sbjct: 7 WALNMKELKLLQTIGKGEFGDVMLG-DYRGNK-VAVKCIKNDATAQA-----FLAEASVM 59
Query: 71 SHLRHPNILRLYGYFYDQKR-VYLILEYAAKGELYKELQKCKYFSERRAA-------TYV 122
+ LRH N+++L G ++K +Y++ EY AKG L L+ S R+ +
Sbjct: 60 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-----SRGRSVLGGDCLLKFS 114
Query: 123 ASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPP 182
+ A+ Y G + +HRD+ N+L+ K++DFG + + + T + + P
Sbjct: 115 LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP 174
Query: 183 EMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRI 225
E + D+WS G+L +E + +G P+ D R+
Sbjct: 175 EALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV 218
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 12/213 (5%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K LG G+FG V++ S VA+K L + E + L+H ++RL
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSV----QAFLEEANLMKTLQHDKLVRL 72
Query: 82 YGYFYDQKRVYLILEYAAKGELYKELQ--KCKYFSERRAATYVASLARALIYCHGKHVIH 139
Y ++ +Y+I E+ AKG L L+ + + + A +A + Y K+ IH
Sbjct: 73 YAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIH 132
Query: 140 RDIKPENLLIGAQGELKIADFGWS----VHTFNRRRTMCGTLDYLPPEMVESVEHDANVD 195
RD++ N+L+ KIADFG + + + R + + PE + +
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSN 192
Query: 196 IWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQ 227
+WS G+L YE + YG P+ + ++D + Q
Sbjct: 193 VWSFGILLYEIVTYGKIPYPGRTNADVMSALSQ 225
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 23/224 (10%)
Query: 13 WTLN--DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W LN + + + +G+G+FG V L + R N VA+K + Q+ E +
Sbjct: 1 WALNMKELKLLQTIGKGEFGDVMLG-DYRGNK-VAVKCIKNDATAQA-----FLAEASVM 53
Query: 71 SHLRHPNILRLYGYFYDQKR-VYLILEYAAKGELYKELQKCKYFSERRAA-------TYV 122
+ LRH N+++L G ++K +Y++ EY AKG L L+ S R+ +
Sbjct: 54 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-----SRGRSVLGGDCLLKFS 108
Query: 123 ASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPP 182
+ A+ Y G + +HRD+ N+L+ K++DFG + + + T + + P
Sbjct: 109 LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP 168
Query: 183 EMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRI 225
E + + D+WS G+L +E + +G P+ D R+
Sbjct: 169 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV 212
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 23/224 (10%)
Query: 13 WTLN--DFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W LN + + + +G+G+FG V L + R N VA+K + Q+ E +
Sbjct: 16 WALNMKELKLLQTIGKGEFGDVMLG-DYRGNK-VAVKCIKNDATAQA-----FLAEASVM 68
Query: 71 SHLRHPNILRLYGYFYDQKR-VYLILEYAAKGELYKELQKCKYFSERRAA-------TYV 122
+ LRH N+++L G ++K +Y++ EY AKG L L+ S R+ +
Sbjct: 69 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-----SRGRSVLGGDCLLKFS 123
Query: 123 ASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPP 182
+ A+ Y G + +HRD+ N+L+ K++DFG + + + T + + P
Sbjct: 124 LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP 183
Query: 183 EMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRI 225
E + + D+WS G+L +E + +G P+ D R+
Sbjct: 184 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV 227
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 124/274 (45%), Gaps = 29/274 (10%)
Query: 18 FDIGKPLGRGKFGHVY-LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH- 75
+ I K +G G V+ + EK+ I A+K + + +Q R E+ + L+
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQH 86
Query: 76 -PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
I+RLY Y + +Y+++E +L L+K K +Y ++ A+ H
Sbjct: 87 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWSVHT-----FNRRRTMCGTLDYLPPEMVESVE 189
++H D+KP N LI G LK+ DFG + + + GT++Y+PPE ++ +
Sbjct: 146 HGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMS 204
Query: 190 HD-----------ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV---QVDLKFPPK 235
D+WSLG + Y YG PF+ + + + +++FP
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 264
Query: 236 PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
P +D++ L +D QR+ + +LL HP++
Sbjct: 265 P--EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 102/243 (41%), Gaps = 37/243 (15%)
Query: 24 LGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEH--QLRREVEIQSHLRHPN 77
LG+G FG V + R + + +VA+K +LQ S EH RE+EI L+H N
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 78 ILRLYGYFYDQKR--VYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHG 134
I++ G Y R + LI+EY G L LQK K + Y + + + + Y
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVESV 188
K IHRD+ N+L+ + +KI DFG + + + + PE +
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
+ D+WS GV+ YE F E S K PP + D Q
Sbjct: 193 KFSVASDVWSFGVVLYEL------FTYIEKS-----------KSPPAEFMRMIGNDKQGQ 235
Query: 249 MLV 251
M+V
Sbjct: 236 MIV 238
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 102/243 (41%), Gaps = 37/243 (15%)
Query: 24 LGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEH--QLRREVEIQSHLRHPN 77
LG+G FG V + R + + +VA+K +LQ S EH RE+EI L+H N
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 78 ILRLYGYFYDQKR--VYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHG 134
I++ G Y R + LI+EY G L LQK K + Y + + + + Y
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 130
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVESV 188
K IHRD+ N+L+ + +KI DFG + + + + PE +
Sbjct: 131 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 190
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
+ D+WS GV+ YE F E S K PP + D Q
Sbjct: 191 KFSVASDVWSFGVVLYEL------FTYIEKS-----------KSPPAEFMRMIGNDKQGQ 233
Query: 249 MLV 251
M+V
Sbjct: 234 MIV 236
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 102/243 (41%), Gaps = 37/243 (15%)
Query: 24 LGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEH--QLRREVEIQSHLRHPN 77
LG+G FG V + R + + +VA+K +LQ S EH RE+EI L+H N
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 78 ILRLYGYFYDQKR--VYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHG 134
I++ G Y R + LI+EY G L LQK K + Y + + + + Y
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 139
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVESV 188
K IHRD+ N+L+ + +KI DFG + + + + PE +
Sbjct: 140 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 199
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
+ D+WS GV+ YE F E S K PP + D Q
Sbjct: 200 KFSVASDVWSFGVVLYEL------FTYIEKS-----------KSPPAEFMRMIGNDKQGQ 242
Query: 249 MLV 251
M+V
Sbjct: 243 MIV 245
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 102/243 (41%), Gaps = 37/243 (15%)
Query: 24 LGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEH--QLRREVEIQSHLRHPN 77
LG+G FG V + R + + +VA+K +LQ S EH RE+EI L+H N
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 78 ILRLYGYFYDQKR--VYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHG 134
I++ G Y R + LI+EY G L LQK K + Y + + + + Y
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 137
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVESV 188
K IHRD+ N+L+ + +KI DFG + + + + PE +
Sbjct: 138 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 197
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
+ D+WS GV+ YE F E S K PP + D Q
Sbjct: 198 KFSVASDVWSFGVVLYEL------FTYIEKS-----------KSPPAEFMRMIGNDKQGQ 240
Query: 249 MLV 251
M+V
Sbjct: 241 MIV 243
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 102/243 (41%), Gaps = 37/243 (15%)
Query: 24 LGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEH--QLRREVEIQSHLRHPN 77
LG+G FG V + R + + +VA+K +LQ S EH RE+EI L+H N
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 78 ILRLYGYFYDQKR--VYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHG 134
I++ G Y R + LI+EY G L LQK K + Y + + + + Y
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVESV 188
K IHRD+ N+L+ + +KI DFG + + + + PE +
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
+ D+WS GV+ YE F E S K PP + D Q
Sbjct: 193 KFSVASDVWSFGVVLYEL------FTYIEKS-----------KSPPAEFMRMIGNDKQGQ 235
Query: 249 MLV 251
M+V
Sbjct: 236 MIV 238
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 102/243 (41%), Gaps = 37/243 (15%)
Query: 24 LGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEH--QLRREVEIQSHLRHPN 77
LG+G FG V + R + + +VA+K +LQ S EH RE+EI L+H N
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 78 ILRLYGYFYDQKR--VYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHG 134
I++ G Y R + LI+EY G L LQK K + Y + + + + Y
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 163
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVESV 188
K IHRD+ N+L+ + +KI DFG + + + + PE +
Sbjct: 164 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 223
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
+ D+WS GV+ YE F E S K PP + D Q
Sbjct: 224 KFSVASDVWSFGVVLYEL------FTYIEKS-----------KSPPAEFMRMIGNDKQGQ 266
Query: 249 MLV 251
M+V
Sbjct: 267 MIV 269
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 102/243 (41%), Gaps = 37/243 (15%)
Query: 24 LGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEH--QLRREVEIQSHLRHPN 77
LG+G FG V + R + + +VA+K +LQ S EH RE+EI L+H N
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 78 ILRLYGYFYDQKR--VYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHG 134
I++ G Y R + LI+EY G L LQK K + Y + + + + Y
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 138
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVESV 188
K IHRD+ N+L+ + +KI DFG + + + + PE +
Sbjct: 139 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 198
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
+ D+WS GV+ YE F E S K PP + D Q
Sbjct: 199 KFSVASDVWSFGVVLYEL------FTYIEKS-----------KSPPAEFMRMIGNDKQGQ 241
Query: 249 MLV 251
M+V
Sbjct: 242 MIV 244
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 102/243 (41%), Gaps = 37/243 (15%)
Query: 24 LGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEH--QLRREVEIQSHLRHPN 77
LG+G FG V + R + + +VA+K +LQ S EH RE+EI L+H N
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 78 ILRLYGYFYDQKR--VYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHG 134
I++ G Y R + LI+EY G L LQK K + Y + + + + Y
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVESV 188
K IHRD+ N+L+ + +KI DFG + + + + PE +
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
+ D+WS GV+ YE F E S K PP + D Q
Sbjct: 211 KFSVASDVWSFGVVLYEL------FTYIEKS-----------KSPPAEFMRMIGNDKQGQ 253
Query: 249 MLV 251
M+V
Sbjct: 254 MIV 256
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 102/243 (41%), Gaps = 37/243 (15%)
Query: 24 LGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEH--QLRREVEIQSHLRHPN 77
LG+G FG V + R + + +VA+K +LQ S EH RE+EI L+H N
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 78 ILRLYGYFYDQKR--VYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHG 134
I++ G Y R + LI+EY G L LQK K + Y + + + + Y
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVESV 188
K IHRD+ N+L+ + +KI DFG + + + + PE +
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
+ D+WS GV+ YE F E S K PP + D Q
Sbjct: 196 KFSVASDVWSFGVVLYEL------FTYIEKS-----------KSPPAEFMRMIGNDKQGQ 238
Query: 249 MLV 251
M+V
Sbjct: 239 MIV 241
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 102/243 (41%), Gaps = 37/243 (15%)
Query: 24 LGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEH--QLRREVEIQSHLRHPN 77
LG+G FG V + R + + +VA+K +LQ S EH RE+EI L+H N
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 78 ILRLYGYFYDQKR--VYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHG 134
I++ G Y R + LI+EY G L LQK K + Y + + + + Y
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 131
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVESV 188
K IHRD+ N+L+ + +KI DFG + + + + PE +
Sbjct: 132 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 191
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
+ D+WS GV+ YE F E S K PP + D Q
Sbjct: 192 KFSVASDVWSFGVVLYEL------FTYIEKS-----------KSPPAEFMRMIGNDKQGQ 234
Query: 249 MLV 251
M+V
Sbjct: 235 MIV 237
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 102/243 (41%), Gaps = 37/243 (15%)
Query: 24 LGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEH--QLRREVEIQSHLRHPN 77
LG+G FG V + R + + +VA+K +LQ S EH RE+EI L+H N
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 78 ILRLYGYFYDQKR--VYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHG 134
I++ G Y R + LI+EY G L LQK K + Y + + + + Y
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 136
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVESV 188
K IHRD+ N+L+ + +KI DFG + + + + PE +
Sbjct: 137 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 196
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
+ D+WS GV+ YE F E S K PP + D Q
Sbjct: 197 KFSVASDVWSFGVVLYEL------FTYIEKS-----------KSPPAEFMRMIGNDKQGQ 239
Query: 249 MLV 251
M+V
Sbjct: 240 MIV 242
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 102/243 (41%), Gaps = 37/243 (15%)
Query: 24 LGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEH--QLRREVEIQSHLRHPN 77
LG+G FG V + R + + +VA+K +LQ S EH RE+EI L+H N
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 78 ILRLYGYFYDQKR--VYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHG 134
I++ G Y R + LI+EY G L LQK K + Y + + + + Y
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVESV 188
K IHRD+ N+L+ + +KI DFG + + + + PE +
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
+ D+WS GV+ YE F E S K PP + D Q
Sbjct: 211 KFSVASDVWSFGVVLYEL------FTYIEKS-----------KSPPAEFMRMIGNDKQGQ 253
Query: 249 MLV 251
M+V
Sbjct: 254 MIV 256
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 124/274 (45%), Gaps = 29/274 (10%)
Query: 18 FDIGKPLGRGKFGHVY-LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH- 75
+ I K +G G V+ + EK+ I A+K + + +Q R E+ + L+
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQH 114
Query: 76 -PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHG 134
I+RLY Y + +Y+++E +L L+K K +Y ++ A+ H
Sbjct: 115 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWSVH-----TFNRRRTMCGTLDYLPPEMVESVE 189
++H D+KP N LI G LK+ DFG + T + + G ++Y+PPE ++ +
Sbjct: 174 HGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMS 232
Query: 190 HD-----------ANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV---QVDLKFPPK 235
D+WSLG + Y YG PF+ + + + +++FP
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 292
Query: 236 PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
P +D++ L +D QR+ + +LL HP++
Sbjct: 293 P--EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 20/232 (8%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL-R 74
ND +G G FG V AR K+ + + + E+E+ L
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYF----------------SERRA 118
HPNI+ L G + +YL +EYA G L L+K + S ++
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 119 ATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLD 178
+ A +AR + Y K IHRD+ N+L+G KIADFG S + G L
Sbjct: 145 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 204
Query: 179 --YLPPEMVESVEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQ 227
++ E + + N D+WS GVL +E + G P+ ++ Y ++ Q
Sbjct: 205 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 256
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 104/245 (42%), Gaps = 37/245 (15%)
Query: 22 KPLGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEH--QLRREVEIQSHLRH 75
+ LG+G FG V + R + + +VA+K +LQ S EH RE+EI L+H
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILKSLQH 73
Query: 76 PNILRLYGYFYDQKR--VYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYC 132
NI++ G Y R + LI+E+ G L + LQK K + Y + + + + Y
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVE 186
K IHRD+ N+L+ + +KI DFG + + + + PE +
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 187 SVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ D+WS GV+ YE F E S K PP + D
Sbjct: 194 ESKFSVASDVWSFGVVLYEL------FTYIEKS-----------KSPPAEFMRMIGNDKQ 236
Query: 247 SQMLV 251
QM+V
Sbjct: 237 GQMIV 241
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 122/274 (44%), Gaps = 14/274 (5%)
Query: 7 AKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRRE 66
A E +D + LGRG +G V R S I A+K + + SQ + +L +
Sbjct: 25 AXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATV--NSQEQKRLLXD 82
Query: 67 VEIQSH-LRHPNILRLYGYFYDQKRVYLILEY--AAKGELYKE-LQKCKYFSERRAATYV 122
++I + P + YG + + V++ E + + YK+ + K + E
Sbjct: 83 LDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIA 142
Query: 123 ASLARALIYCHGK-HVIHRDIKPENLLIGAQGELKIADFGWSVHTFNR--RRTMCGTLDY 179
S+ +AL + H K VIHRD+KP N+LI A G++K DFG S + + + G Y
Sbjct: 143 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPY 202
Query: 180 LPPEMV----ESVEHDANVDIWSLGVLCYEFLYGVPPFEA-KEHSDTYRRIVQVDLKFPP 234
PE + + DIWSLG+ E P+++ +++V+ P
Sbjct: 203 XAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLP 262
Query: 235 KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPW 268
S+ D SQ L K+S +R +L +HP+
Sbjct: 263 ADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPF 296
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 103/243 (42%), Gaps = 37/243 (15%)
Query: 24 LGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEH--QLRREVEIQSHLRHPN 77
LG+G FG V + R + + +VA+K +LQ S EH RE+EI L+H N
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 78 ILRLYGYFYDQKR--VYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHG 134
I++ G Y R + LI+EY G L LQK K + Y + + + + Y
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 133
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVESV 188
K IHR++ N+L+ + +KI DFG + + + + + PE +
Sbjct: 134 KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTES 193
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
+ D+WS GV+ YE F E S K PP + D Q
Sbjct: 194 KFSVASDVWSFGVVLYEL------FTYIEKS-----------KSPPAEFMRMIGNDKQGQ 236
Query: 249 MLV 251
M+V
Sbjct: 237 MIV 239
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 20/232 (8%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL-R 74
ND +G G FG V AR K+ + + + E+E+ L
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYF----------------SERRA 118
HPNI+ L G + +YL +EYA G L L+K + S ++
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 119 ATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLD 178
+ A +AR + Y K IHRD+ N+L+G KIADFG S + G L
Sbjct: 135 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 194
Query: 179 --YLPPEMVESVEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQ 227
++ E + + N D+WS GVL +E + G P+ ++ Y ++ Q
Sbjct: 195 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 246
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 54/257 (21%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
+ +GK LG G FG V + S ALK + LQ + ++ RE++I L H N
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKV----LQDPRYKN---RELDIMKVLDHVN 61
Query: 78 ILRLYGYFY--------------------------------------DQKRVYLILEYAA 99
I++L YFY K + +I+EY
Sbjct: 62 IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP 121
Query: 100 KGELYKELQK----CKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQ-GE 154
L+K L+ + + Y+ L RA+ + H + HRDIKP+NLL+ ++
Sbjct: 122 D-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNT 180
Query: 155 LKIADFGWS---VHTFNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVP 211
LK+ DFG + + + +C P M+ + E+ ++D+WS+G + E + G P
Sbjct: 181 LKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240
Query: 212 PFEAKEHSDTYRRIVQV 228
F + D RI+Q+
Sbjct: 241 LFSGETSIDQLVRIIQI 257
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 130/289 (44%), Gaps = 42/289 (14%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+DF+ LG+G FG V AR + A+K + ++ + S + EV + + L H
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI----LSEVMLLASLNH 61
Query: 76 PNILRLYGYFYDQKR-------------VYLILEYAAKGELYKELQKCKYFSERRAATY- 121
++R Y + +++ +++ +EY LY +L + +++R +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLY-DLIHSENLNQQRDEYWR 120
Query: 122 -VASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS--VH------------- 165
+ AL Y H + +IHRD+KP N+ I +KI DFG + VH
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 166 --TFNRRRTMCGTLDYLPPEMVESVEH-DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTY 222
+ + + GT Y+ E+++ H + +D++SLG++ +E +Y P E +
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERVNIL 238
Query: 223 RRIVQVDLKFPP--KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+++ V ++FPP K +I ++ D ++R LL W+
Sbjct: 239 KKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 106/241 (43%), Gaps = 14/241 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V++ + VA+K L + +E ++ LRH +++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 80
Query: 84 YFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
++ +Y+++EY +KG L L + KY + A +A + Y + +HRD
Sbjct: 81 VVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+G K+ADFG + + + R+ + + PE D+W
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 198 SLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQ 256
S G+L E G P+ + + + V+ + P P + DL+ Q KD +
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKDPEE 258
Query: 257 R 257
R
Sbjct: 259 R 259
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 116/251 (46%), Gaps = 25/251 (9%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LGRG FG V+ +K++ A+K K +L+ + E E+ + L P I+ LYG
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVK---KVRLEVFRAE-----ELMACAGLTSPRIVPLYG 152
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ V + +E G L + +++ E RA Y+ L Y H + ++H D+K
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVK 212
Query: 144 PENLLIGAQGE-LKIADFGWSV--------HTFNRRRTMCGTLDYLPPEMVESVEHDANV 194
+N+L+ + G + DFG +V + + GT ++ PE+V DA V
Sbjct: 213 ADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKV 272
Query: 195 DIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAKDLISQMLVK 252
D+WS + L G P+ + +R + + + P P+ + + L +Q ++
Sbjct: 273 DVWSSCCMMLHMLNGCHPW-----TQFFRGPLCLKIASEPPPVREIPPSCAPLTAQA-IQ 326
Query: 253 DSSQRLPLHKL 263
+ ++ P+H++
Sbjct: 327 EGLRKEPIHRV 337
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 134/297 (45%), Gaps = 52/297 (17%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+ + + LGRGK+ V+ A +N V +K+L + +++++RE++I +LR
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL------KPVKKNKIKREIKILENLRG 90
Query: 76 -PNILRLYGYFYD--QKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYC 132
PNI+ L D + L+ E+ + + Q + R Y+ + +AL YC
Sbjct: 91 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIR---FYMYEILKALDYC 147
Query: 133 HGKHVIHRDIKPENLLIGAQG-ELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESV 188
H ++HRD+KP N++I + +L++ D+G + H + + PE +V+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 189 EHDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPP 234
+D ++D+WSLG + ++ P F ++ D RI +V +++ P
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 235 K----------------------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ +VS A D + ++L D RL + +EHP+
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 101/243 (41%), Gaps = 37/243 (15%)
Query: 24 LGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEH--QLRREVEIQSHLRHPN 77
LG+G FG V + R + + +VA+K +LQ S EH RE+EI L+H N
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 78 ILRLYGYFYDQKR--VYLILEYAAKGELYKELQK-CKYFSERRAATYVASLARALIYCHG 134
I++ G Y R + LI+EY G L LQ + + Y + + + + Y
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGT 135
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVESV 188
K IHRD+ N+L+ + +KI DFG + + + + PE +
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 189 EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
+ D+WS GV+ YE F E S K PP + D Q
Sbjct: 196 KFSVASDVWSFGVVLYEL------FTYIEKS-----------KSPPAEFMRMIGNDKQGQ 238
Query: 249 MLV 251
M+V
Sbjct: 239 MIV 241
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 23/202 (11%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LGRG FG V+ ++K++ A+K K +L+ +VE E+ + L P I+ LYG
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVK---KVRLEVFRVE-----ELVACAGLSSPRIVPLYG 131
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ V + +E G L + +++ E RA Y+ L Y H + ++H D+K
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 191
Query: 144 PENLLIGAQGE-LKIADFGWSVHTFNRRRTMCG----TLDYLP-------PEMVESVEHD 191
+N+L+ + G + DFG H + G T DY+P PE+V D
Sbjct: 192 ADNVLLSSDGSRAALCDFG---HALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 248
Query: 192 ANVDIWSLGVLCYEFLYGVPPF 213
A VDIWS + L G P+
Sbjct: 249 AKVDIWSSCCMMLHMLNGCHPW 270
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 77 NILRLYGYFYDQKRVYLILEYAAK-GELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
++RL +F LILE +L+ + + E A ++ + A+ +CH
Sbjct: 117 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 176
Query: 136 HVIHRDIKPENLLIG-AQGELKIADFGWSVHTFNRRRT-MCGTLDYLPPEMVESVE-HDA 192
V+HRDIK EN+LI +GELK+ DFG + T GT Y PPE + H
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 236
Query: 193 NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVK 252
+ +WSLG+L Y+ + G PFE E I++ + F + VSS + LI L
Sbjct: 237 SAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQR--VSSECQHLIRWCLAL 288
Query: 253 DSSQRLPLHKLLEHPWI 269
S R ++ HPW+
Sbjct: 289 RPSDRPTFEEIQNHPWM 305
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 21 GKPLGRGKFGHVYLAREKRSNHIVALKVLFKS-QLQQSQVEHQLRREVEIQSHLRHPNIL 79
G +G G FG VY + +N VA+K L + +++ Q +E+++ + +H N++
Sbjct: 36 GNKMGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 80 RLYGYFYDQKRVYLILEYAAKGELYKELQ---KCKYFSERRAATYVASLARALIYCHGKH 136
L G+ D + L+ Y G L L S A + + H H
Sbjct: 94 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH 153
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT-----MCGTLDYLPPEMVESVEHD 191
IHRDIK N+L+ KI+DFG + + +T + GT Y+ PE + E
Sbjct: 154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG-EIT 212
Query: 192 ANVDIWSLGVLCYEFLYGVPPFE 214
DI+S GV+ E + G+P +
Sbjct: 213 PKSDIYSFGVVLLEIITGLPAVD 235
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 21 GKPLGRGKFGHVYLAREKRSNHIVALKVLFKS-QLQQSQVEHQLRREVEIQSHLRHPNIL 79
G +G G FG VY + +N VA+K L + +++ Q +E+++ + +H N++
Sbjct: 36 GNKMGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 80 RLYGYFYDQKRVYLILEYAAKGELYKELQ---KCKYFSERRAATYVASLARALIYCHGKH 136
L G+ D + L+ Y G L L S A + + H H
Sbjct: 94 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH 153
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT-----MCGTLDYLPPEMVESVEHD 191
IHRDIK N+L+ KI+DFG + + +T + GT Y+ PE + E
Sbjct: 154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG-EIT 212
Query: 192 ANVDIWSLGVLCYEFLYGVPPFE 214
DI+S GV+ E + G+P +
Sbjct: 213 PKSDIYSFGVVLLEIITGLPAVD 235
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 134/312 (42%), Gaps = 61/312 (19%)
Query: 14 TLNDFDIG------KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREV 67
++ FD+G KPLG G G V+ A + + VA+K + + Q V+H LR E+
Sbjct: 3 NIHGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQS--VKHALR-EI 59
Query: 68 EIQSHLRHPNILRLY--------------GYFYDQKRVYLILEYAAKGELYKELQKCKYF 113
+I L H NI++++ G + VY++ EY + +L L++
Sbjct: 60 KIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQGPLL 118
Query: 114 SERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQG-ELKIADFGWS----VHTFN 168
E A ++ L R L Y H +V+HRD+KP NL I + LKI DFG + H +
Sbjct: 119 -EEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH 177
Query: 169 RRRTMCGTLD--YLPPEMVESV-EHDANVDIWSLGVLCYEFLYGVPPFEAKE-------- 217
+ G + Y P ++ S + +D+W+ G + E L G F
Sbjct: 178 KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237
Query: 218 -------HSDTYRRIVQV-------DLKFPPKPI------VSSAAKDLISQMLVKDSSQR 257
H + + ++ V D+ P KP+ +S A D + Q+L R
Sbjct: 238 LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDR 297
Query: 258 LPLHKLLEHPWI 269
L + L HP++
Sbjct: 298 LTAEEALSHPYM 309
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 20/232 (8%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL-R 74
ND +G G FG V AR K+ + + + E+E+ L
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 75 HPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYF----------------SERRA 118
HPNI+ L G + +YL +EYA G L L+K + S ++
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 119 ATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLD 178
+ A +AR + Y K IHR++ N+L+G KIADFG S + G L
Sbjct: 142 LHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 201
Query: 179 --YLPPEMVESVEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQ 227
++ E + + N D+WS GVL +E + G P+ ++ Y ++ Q
Sbjct: 202 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 253
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 115/251 (45%), Gaps = 25/251 (9%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LGRG FG V+ +K++ A+K K +L+ + E E+ + L P I+ LYG
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVK---KVRLEVFRAE-----ELMACAGLTSPRIVPLYG 133
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ V + +E G L + +++ E RA Y+ L Y H + ++H D+K
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVK 193
Query: 144 PENLLIGAQGE-LKIADFGWSV--------HTFNRRRTMCGTLDYLPPEMVESVEHDANV 194
+N+L+ + G + DFG +V + GT ++ PE+V DA V
Sbjct: 194 ADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKV 253
Query: 195 DIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPI--VSSAAKDLISQMLVK 252
D+WS + L G P+ + +R + + + P P+ + + L +Q ++
Sbjct: 254 DVWSSCCMMLHMLNGCHPW-----TQFFRGPLCLKIASEPPPVREIPPSCAPLTAQA-IQ 307
Query: 253 DSSQRLPLHKL 263
+ ++ P+H++
Sbjct: 308 EGLRKEPIHRV 318
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 106/241 (43%), Gaps = 14/241 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V++ + VA+K L + +E ++ LRH +++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 84 YFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
++ +Y+++EY +KG L L + KY + A +A + Y + +HRD
Sbjct: 81 VVSEEP-IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+G K+ADFG + + + R+ + + PE D+W
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 198 SLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQ 256
S G+L E G P+ + + + V+ + P P + DL+ Q KD +
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKDPEE 258
Query: 257 R 257
R
Sbjct: 259 R 259
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 105/241 (43%), Gaps = 14/241 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V++ + VA+K L + +E ++ LRH +++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 84 YFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
++ +Y++ EY +KG L L + KY + A +A + Y + +HRD
Sbjct: 81 VVSEEP-IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+G K+ADFG + + + R+ + + PE D+W
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 198 SLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQ 256
S G+L E G P+ + + + V+ + P P + DL+ Q KD +
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKDPEE 258
Query: 257 R 257
R
Sbjct: 259 R 259
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 105/241 (43%), Gaps = 14/241 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V++ + VA+K L + +E ++ LRH +++LY
Sbjct: 15 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 69
Query: 84 YFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
++ +Y++ EY +KG L L + KY + A +A + Y + +HRD
Sbjct: 70 VVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 128
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+G K+ADFG + + + R+ + + PE D+W
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 188
Query: 198 SLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQ 256
S G+L E G P+ + + + V+ + P P + DL+ Q KD +
Sbjct: 189 SFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKDPEE 247
Query: 257 R 257
R
Sbjct: 248 R 248
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 105/241 (43%), Gaps = 14/241 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V++ + VA+K L + +E ++ LRH +++LY
Sbjct: 17 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 71
Query: 84 YFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
++ +Y++ EY +KG L L + KY + A +A + Y + +HRD
Sbjct: 72 VVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 130
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+G K+ADFG + + + R+ + + PE D+W
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 198 SLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQ 256
S G+L E G P+ + + + V+ + P P + DL+ Q KD +
Sbjct: 191 SFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKDPEE 249
Query: 257 R 257
R
Sbjct: 250 R 250
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 111/266 (41%), Gaps = 29/266 (10%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLARE---KRSNHIVALKVLFKSQLQQSQV 59
+++ EK + N+ GK LG G FG V A + + ++ + V +
Sbjct: 33 TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE 92
Query: 60 EHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRA 118
+ L E++I SHL +H NI+ L G V +I EY G+L L++ E
Sbjct: 93 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDP 152
Query: 119 ATYVAS--------------LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSV 164
A +A+ +A+ + + K+ IHRD+ N+L+ KI DFG +
Sbjct: 153 AFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
Query: 165 HTFNRRRTMCGTLDYLP-----PEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEH 218
N + LP PE + + D+WS G+L +E F G+ P+
Sbjct: 213 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 272
Query: 219 SDTYRRIVQ-----VDLKFPPKPIVS 239
+ + ++V+ F PK I S
Sbjct: 273 NSKFYKLVKDGYQMAQPAFAPKNIYS 298
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 111/266 (41%), Gaps = 29/266 (10%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLARE---KRSNHIVALKVLFKSQLQQSQV 59
+++ EK + N+ GK LG G FG V A + + ++ + V +
Sbjct: 33 TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE 92
Query: 60 EHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRA 118
+ L E++I SHL +H NI+ L G V +I EY G+L L++ E
Sbjct: 93 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDP 152
Query: 119 ATYVAS--------------LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSV 164
A +A+ +A+ + + K+ IHRD+ N+L+ KI DFG +
Sbjct: 153 AFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
Query: 165 HTFNRRRTMCGTLDYLP-----PEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEH 218
N + LP PE + + D+WS G+L +E F G+ P+
Sbjct: 213 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 272
Query: 219 SDTYRRIVQ-----VDLKFPPKPIVS 239
+ + ++V+ F PK I S
Sbjct: 273 NSKFYKLVKDGYQMAQPAFAPKNIYS 298
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 105/241 (43%), Gaps = 14/241 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V++ + VA+K L + +E ++ LRH +++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 80
Query: 84 YFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
++ +Y++ EY +KG L L + KY + A +A + Y + +HRD
Sbjct: 81 VVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+G K+ADFG + + + R+ + + PE D+W
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 198 SLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQ 256
S G+L E G P+ + + + V+ + P P + DL+ Q KD +
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKDPEE 258
Query: 257 R 257
R
Sbjct: 259 R 259
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 23/202 (11%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+GRG FG V+ ++K++ A+K K +L+ +VE E+ + L P I+ LYG
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVK---KVRLEVFRVE-----ELVACAGLSSPRIVPLYG 117
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ V + +E G L + +++ E RA Y+ L Y H + ++H D+K
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 177
Query: 144 PENLLIGAQGE-LKIADFGWSVHTFNRRRTMCG----TLDYLP-------PEMVESVEHD 191
+N+L+ + G + DFG H + G T DY+P PE+V D
Sbjct: 178 ADNVLLSSDGSRAALCDFG---HALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 234
Query: 192 ANVDIWSLGVLCYEFLYGVPPF 213
A VDIWS + L G P+
Sbjct: 235 AKVDIWSSCCMMLHMLNGCHPW 256
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 105/241 (43%), Gaps = 14/241 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V++ + VA+K L + +E ++ LRH +++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 80
Query: 84 YFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
++ +Y+++EY +KG L L + KY + A +A + Y + +HRD
Sbjct: 81 VVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+G K+ADFG + + R+ + + PE D+W
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 198 SLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQ 256
S G+L E G P+ + + + V+ + P P + DL+ Q KD +
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKDPEE 258
Query: 257 R 257
R
Sbjct: 259 R 259
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 23/202 (11%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+GRG FG V+ ++K++ A+K K +L+ +VE E+ + L P I+ LYG
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVK---KVRLEVFRVE-----ELVACAGLSSPRIVPLYG 133
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIK 143
+ V + +E G L + +++ E RA Y+ L Y H + ++H D+K
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 193
Query: 144 PENLLIGAQGE-LKIADFGWSVHTFNRRRTMCG----TLDYLP-------PEMVESVEHD 191
+N+L+ + G + DFG H + G T DY+P PE+V D
Sbjct: 194 ADNVLLSSDGSRAALCDFG---HALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 250
Query: 192 ANVDIWSLGVLCYEFLYGVPPF 213
A VDIWS + L G P+
Sbjct: 251 AKVDIWSSCCMMLHMLNGCHPW 272
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 14/241 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V++ + VA+K L + +E ++ LRH +++LY
Sbjct: 193 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGNMS----PEAFLQEAQVMKKLRHEKLVQLYA 247
Query: 84 YFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
++ +Y++ EY +KG L L + KY + A +A + Y + +HRD
Sbjct: 248 VVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 306
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+G K+ADFG + + R+ + + PE D+W
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 366
Query: 198 SLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQ 256
S G+L E G P+ + + + V+ + P P + DL+ Q KD +
Sbjct: 367 SFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKDPEE 425
Query: 257 R 257
R
Sbjct: 426 R 426
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 133/328 (40%), Gaps = 67/328 (20%)
Query: 2 CSEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALK-VLFKSQLQQSQVE 60
C EVS EK + K +G+G FG V+ AR +++ VALK VL +++ + +
Sbjct: 14 CDEVSKYEK---------LAK-IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT 63
Query: 61 HQLRREVEIQSHLRHPNILRLY--------GYFYDQKRVYLILEYAA---KGELYKELQK 109
RE++I L+H N++ L Y + +YL+ ++ G L L K
Sbjct: 64 AL--REIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK 121
Query: 110 CKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTF-- 167
F+ + L L Y H ++HRD+K N+LI G LK+ADFG + F
Sbjct: 122 ---FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA-RAFSL 177
Query: 168 ------NRRRTMCGTLDYLPPE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSD 220
NR TL Y PPE ++ ++ +D+W G + E P +
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH 237
Query: 221 TYRRIVQVDLKFPPK--PIVSS----------------------------AAKDLISQML 250
I Q+ P+ P V + A DLI ++L
Sbjct: 238 QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLL 297
Query: 251 VKDSSQRLPLHKLLEHPWIIQNADPSGV 278
V D +QR+ L H + + PS +
Sbjct: 298 VLDPAQRIDSDDALNHDFFWSDPMPSDL 325
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 105/241 (43%), Gaps = 14/241 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V++ + VA+K L + +E ++ +RH +++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP----EAFLQEAQVMKKIRHEKLVQLYA 80
Query: 84 YFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
++ +Y++ EY +KG L L + KY + A +A + Y + +HRD
Sbjct: 81 VVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+G K+ADFG + + + R+ + + PE D+W
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 198 SLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQ 256
S G+L E G P+ + + + V+ + P P + DL+ Q KD +
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKDPEE 258
Query: 257 R 257
R
Sbjct: 259 R 259
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 111/248 (44%), Gaps = 44/248 (17%)
Query: 21 GKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILR 80
G +GRG +GHVY A+ K + Q++ + + RE+ + L+HPN++
Sbjct: 26 GCKVGRGTYGHVYKAKRKDGKDDKDYAL---KQIEGTGISMSACREIALLRELKHPNVIS 82
Query: 81 LYGYF--YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI-------- 130
L F + ++V+L+ +YA + +L+ + K+ +A L R ++
Sbjct: 83 LQKVFLSHADRKVWLLFDYA-EHDLWHII---KFHRASKANKKPVQLPRGMVKSLLYQIL 138
Query: 131 ----YCHGKHVIHRDIKPENLLIGAQ----GELKIADFGWSVHTFNRRRTMCGTLD---- 178
Y H V+HRD+KP N+L+ + G +KIAD G++ FN LD
Sbjct: 139 DGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA-RLFNSPLKPLADLDPVVV 197
Query: 179 ---YLPPEMVESVEH-DANVDIWSLGVLCYEFLYGVPPFEAKE---------HSDTYRRI 225
Y PE++ H +DIW++G + E L P F ++ H D RI
Sbjct: 198 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 257
Query: 226 VQVDLKFP 233
V + FP
Sbjct: 258 FNV-MGFP 264
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 25/262 (9%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLARE---KRSNHIVALKVLFKSQLQQSQV 59
+++ EK + N+ GK LG G FG V A + + ++ + V +
Sbjct: 25 TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE 84
Query: 60 EHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK--------- 109
+ L E++I SHL +H NI+ L G V +I EY G+L L++
Sbjct: 85 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKE 144
Query: 110 -CKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFN 168
+ R + + +A+ + + K+ IHRD+ N+L+ KI DFG + N
Sbjct: 145 DGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 204
Query: 169 RRRTMCGTLDYLP-----PEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTY 222
+ LP PE + + D+WS G+L +E F G+ P+ + +
Sbjct: 205 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF 264
Query: 223 RRIVQ-----VDLKFPPKPIVS 239
++V+ F PK I S
Sbjct: 265 YKLVKDGYQMAQPAFAPKNIYS 286
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 133/328 (40%), Gaps = 67/328 (20%)
Query: 2 CSEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALK-VLFKSQLQQSQVE 60
C EVS EK + K +G+G FG V+ AR +++ VALK VL +++ + +
Sbjct: 14 CDEVSKYEK---------LAK-IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT 63
Query: 61 HQLRREVEIQSHLRHPNILRLY--------GYFYDQKRVYLILEYAA---KGELYKELQK 109
RE++I L+H N++ L Y + +YL+ ++ G L L K
Sbjct: 64 AL--REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK 121
Query: 110 CKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTF-- 167
F+ + L L Y H ++HRD+K N+LI G LK+ADFG + F
Sbjct: 122 ---FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA-RAFSL 177
Query: 168 ------NRRRTMCGTLDYLPPE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSD 220
NR TL Y PPE ++ ++ +D+W G + E P +
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH 237
Query: 221 TYRRIVQVDLKFPPK--PIVSS----------------------------AAKDLISQML 250
I Q+ P+ P V + A DLI ++L
Sbjct: 238 QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLL 297
Query: 251 VKDSSQRLPLHKLLEHPWIIQNADPSGV 278
V D +QR+ L H + + PS +
Sbjct: 298 VLDPAQRIDSDDALNHDFFWSDPMPSDL 325
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 31/268 (11%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLARE---KRSNHIVALKVLFKSQLQQSQV 59
+++ EK + N+ GK LG G FG V A + + ++ + V +
Sbjct: 33 TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE 92
Query: 60 EHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK------- 111
+ L E++I SHL +H NI+ L G V +I EY G+L L++ +
Sbjct: 93 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYS 152
Query: 112 ---------YFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGW 162
S R + + +A+ + + K+ IHRD+ N+L+ KI DFG
Sbjct: 153 YNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL 212
Query: 163 SVHTFNRRRTMCGTLDYLP-----PEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAK 216
+ N + LP PE + + D+WS G+L +E F G+ P+
Sbjct: 213 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 272
Query: 217 EHSDTYRRIVQ-----VDLKFPPKPIVS 239
+ + ++V+ F PK I S
Sbjct: 273 LVNSKFYKLVKDGYQMAQPAFAPKNIYS 300
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 105/241 (43%), Gaps = 14/241 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V++ + VA+K L + +E ++ LRH +++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 84 YFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
++ +Y++ EY +KG L L + KY + A +A + Y + +HRD
Sbjct: 81 VVSEEP-IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+G K+ADFG + + + R+ + + PE D+W
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 198 SLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQ 256
S G+L E G P+ + + + V+ + P P + DL+ Q KD +
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKDPEE 258
Query: 257 R 257
R
Sbjct: 259 R 259
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 128/289 (44%), Gaps = 42/289 (14%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+DF+ LG+G FG V AR + A+K + ++ + S + EV + + L H
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI----LSEVXLLASLNH 61
Query: 76 PNILRLYGYFYDQKR-------------VYLILEYAAKGELYKELQKCKYFSERRAATY- 121
++R Y + +++ +++ EY LY +L + +++R +
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLY-DLIHSENLNQQRDEYWR 120
Query: 122 -VASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS--VH------------- 165
+ AL Y H + +IHR++KP N+ I +KI DFG + VH
Sbjct: 121 LFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 166 --TFNRRRTMCGTLDYLPPEMVESVEH-DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTY 222
+ + + GT Y+ E+++ H + +D +SLG++ +E +Y P E +
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY--PFSTGXERVNIL 238
Query: 223 RRIVQVDLKFPP--KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+++ V ++FPP K +I ++ D ++R LL W+
Sbjct: 239 KKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 14/241 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V++ + VA+K L + +E ++ LRH +++LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 80
Query: 84 YFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
++ +Y++ EY +KG L L + KY + A +A + Y + +HRD
Sbjct: 81 VVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
+ N+L+G K+ADFG + + + R+ + + PE D+W
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 198 SLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQ 256
S G+L E G P+ + + + V+ + P P + DL+ Q KD +
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKDPEE 258
Query: 257 R 257
R
Sbjct: 259 R 259
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 20/235 (8%)
Query: 5 VSAKEKKRWTLNDFDIG-------KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQS 57
+S+K +K W + ++I K LG G+FG V++A + KV K+ S
Sbjct: 170 MSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHT-----KVAVKTMKPGS 224
Query: 58 QVEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSER- 116
E + L+H +++L+ ++ +Y+I E+ AKG L L+ + +
Sbjct: 225 MSVEAFLAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPL 283
Query: 117 -RAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSV----HTFNRRR 171
+ + A +A + + ++ IHRD++ N+L+ A KIADFG + + + R
Sbjct: 284 PKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE 343
Query: 172 TMCGTLDYLPPEMVESVEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRI 225
+ + PE + D+WS G+L E + YG P+ + + R +
Sbjct: 344 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 398
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 133/328 (40%), Gaps = 67/328 (20%)
Query: 2 CSEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALK-VLFKSQLQQSQVE 60
C EVS EK + K +G+G FG V+ AR +++ VALK VL +++ + +
Sbjct: 13 CDEVSKYEK---------LAK-IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT 62
Query: 61 HQLRREVEIQSHLRHPNILRLY--------GYFYDQKRVYLILEYAA---KGELYKELQK 109
RE++I L+H N++ L Y + +YL+ ++ G L L K
Sbjct: 63 AL--REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK 120
Query: 110 CKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTF-- 167
F+ + L L Y H ++HRD+K N+LI G LK+ADFG + F
Sbjct: 121 ---FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA-RAFSL 176
Query: 168 ------NRRRTMCGTLDYLPPE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSD 220
NR TL Y PPE ++ ++ +D+W G + E P +
Sbjct: 177 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH 236
Query: 221 TYRRIVQVDLKFPPK--PIVSS----------------------------AAKDLISQML 250
I Q+ P+ P V + A DLI ++L
Sbjct: 237 QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLL 296
Query: 251 VKDSSQRLPLHKLLEHPWIIQNADPSGV 278
V D +QR+ L H + + PS +
Sbjct: 297 VLDPAQRIDSDDALNHDFFWSDPMPSDL 324
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 133/328 (40%), Gaps = 67/328 (20%)
Query: 2 CSEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALK-VLFKSQLQQSQVE 60
C EVS EK + K +G+G FG V+ AR +++ VALK VL +++ + +
Sbjct: 14 CDEVSKYEK---------LAK-IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT 63
Query: 61 HQLRREVEIQSHLRHPNILRLY--------GYFYDQKRVYLILEYAA---KGELYKELQK 109
RE++I L+H N++ L Y + +YL+ ++ G L L K
Sbjct: 64 A--LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK 121
Query: 110 CKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTF-- 167
F+ + L L Y H ++HRD+K N+LI G LK+ADFG + F
Sbjct: 122 ---FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA-RAFSL 177
Query: 168 ------NRRRTMCGTLDYLPPE-MVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSD 220
NR TL Y PPE ++ ++ +D+W G + E P +
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH 237
Query: 221 TYRRIVQVDLKFPPK--PIVSS----------------------------AAKDLISQML 250
I Q+ P+ P V + A DLI ++L
Sbjct: 238 QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLL 297
Query: 251 VKDSSQRLPLHKLLEHPWIIQNADPSGV 278
V D +QR+ L H + + PS +
Sbjct: 298 VLDPAQRIDSDDALNHDFFWSDPMPSDL 325
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 25/262 (9%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLARE---KRSNHIVALKVLFKSQLQQSQV 59
+++ EK + N+ GK LG G FG V A + + ++ + V +
Sbjct: 33 TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE 92
Query: 60 EHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK--------- 109
+ L E++I SHL +H NI+ L G V +I EY G+L L++
Sbjct: 93 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKE 152
Query: 110 -CKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFN 168
+ R + + +A+ + + K+ IHRD+ N+L+ KI DFG + N
Sbjct: 153 DGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 212
Query: 169 RRRTMCGTLDYLP-----PEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTY 222
+ LP PE + + D+WS G+L +E F G+ P+ + +
Sbjct: 213 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF 272
Query: 223 RRIVQVDLK-----FPPKPIVS 239
++V+ + F PK I S
Sbjct: 273 YKLVKDGYQMAQPAFAPKNIYS 294
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 15/226 (6%)
Query: 9 EKKRWTL--NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRRE 66
EK W + + K LG G+FG V++A + KV K+ S E
Sbjct: 6 EKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHT-----KVAVKTMKPGSMSVEAFLAE 60
Query: 67 VEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSER--RAATYVAS 124
+ L+H +++L+ ++ +Y+I E+ AKG L L+ + + + + A
Sbjct: 61 ANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ 119
Query: 125 LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYL 180
+A + + ++ IHRD++ N+L+ A KIADFG + + + R + +
Sbjct: 120 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWT 179
Query: 181 PPEMVESVEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRI 225
PE + D+WS G+L E + YG P+ + + R +
Sbjct: 180 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 225
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 37/241 (15%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREK-----RSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
N+ + + +G G FG V+ AR +VA+K+L + Q + Q RE +
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQ--REAALM 104
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK------CKY-FSERRAATYVA 123
+ +PNI++L G K + L+ EY A G+L + L+ C S+ V+
Sbjct: 105 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 164
Query: 124 S-----------------LARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT 166
S +A + Y + +HRD+ N L+G +KIADFG S +
Sbjct: 165 SPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 224
Query: 167 FNRRRTMCGTLD-----YLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSD 220
++ D ++PPE + + D+W+ GV+ +E F YG+ P+ H +
Sbjct: 225 YSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE 284
Query: 221 T 221
Sbjct: 285 V 285
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 21 GKPLGRGKFGHVYLAREKRSNHIVALKVLFKS-QLQQSQVEHQLRREVEIQSHLRHPNIL 79
G +G G FG VY + +N VA+K L + +++ Q +E+++ + +H N++
Sbjct: 30 GNKMGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 87
Query: 80 RLYGYFYDQKRVYLILEYAAKGELYKELQ---KCKYFSERRAATYVASLARALIYCHGKH 136
L G+ D + L+ Y G L L S A + + H H
Sbjct: 88 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH 147
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT-----MCGTLDYLPPEMVESVEHD 191
IHRDIK N+L+ KI+DFG + + + + GT Y+ PE + E
Sbjct: 148 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG-EIT 206
Query: 192 ANVDIWSLGVLCYEFLYGVPPFE 214
DI+S GV+ E + G+P +
Sbjct: 207 PKSDIYSFGVVLLEIITGLPAVD 229
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 105/241 (43%), Gaps = 14/241 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V++ + VA+K L + +E ++ LRH +++LY
Sbjct: 19 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 73
Query: 84 YFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
++ +Y++ EY +KG L L + KY + A +A + Y + +HRD
Sbjct: 74 VVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 132
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+G K+ADFG + + + R+ + + PE D+W
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 192
Query: 198 SLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQ 256
S G+L E G P+ + + + V+ + P P + DL+ Q K+ +
Sbjct: 193 SFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKEPEE 251
Query: 257 R 257
R
Sbjct: 252 R 252
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 114/250 (45%), Gaps = 26/250 (10%)
Query: 13 WTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSH 72
W L+D LG+G +V+ R K++ + A+KV F + V+ Q+R E E+
Sbjct: 11 WLLSDI-----LGQGATANVFRGRHKKTGDLFAIKV-FNNISFLRPVDVQMR-EFEVLKK 63
Query: 73 LRHPNILRLYGYFYDQ--KRVYLILEYAAKGELYKELQKCKY---FSERRAATYVASLAR 127
L H NI++L+ + + LI+E+ G LY L++ E + +
Sbjct: 64 LNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG 123
Query: 128 ALIYCHGKHVIHRDIKPENLL--IGAQGE--LKIADFGWSVHTFNRRR--TMCGTLDYLP 181
+ + ++HR+IKP N++ IG G+ K+ DFG + + + ++ GT +YL
Sbjct: 124 GMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLH 183
Query: 182 PEMVESV--------EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
P+M E ++ A VD+WS+GV Y G PF E + ++ +
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243
Query: 234 PKPIVSSAAK 243
P +S K
Sbjct: 244 PSGAISGVQK 253
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 28/218 (12%)
Query: 11 KRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
KR+ + DF + +G G FG V+ A+ + +K + + + E REV+
Sbjct: 7 KRFGM-DFKEIELIGSGGFGQVFKAKHRIDGKTYVIK---RVKYNNEKAE----REVKAL 58
Query: 71 SHLRHPNILRLYG----YFYD------------QKRVYLILEYAAKGEL--YKELQKCKY 112
+ L H NI+ G + YD K +++ +E+ KG L + E ++ +
Sbjct: 59 AKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 118
Query: 113 FSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRR 170
+ A + + + Y H K +I+RD+KP N+ + ++KI DFG S+ +R
Sbjct: 119 LDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 178
Query: 171 RTMCGTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLY 208
GTL Y+ PE + S ++ VD+++LG++ E L+
Sbjct: 179 XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH 216
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 105/241 (43%), Gaps = 14/241 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V++ + VA+K L + +E ++ LRH +++LY
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 84 YFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
++ +Y++ EY +KG L L + KY + A +A + Y + +HRD
Sbjct: 247 VVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+G K+ADFG + + + R+ + + PE D+W
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 198 SLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQ 256
S G+L E G P+ + + + V+ + P P + DL+ Q K+ +
Sbjct: 366 SFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKEPEE 424
Query: 257 R 257
R
Sbjct: 425 R 425
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 105/241 (43%), Gaps = 14/241 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V++ + VA+K L + +E ++ LRH +++LY
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 84 YFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
++ +Y++ EY +KG L L + KY + A +A + Y + +HRD
Sbjct: 247 VVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+G K+ADFG + + + R+ + + PE D+W
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 198 SLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQ 256
S G+L E G P+ + + + V+ + P P + DL+ Q K+ +
Sbjct: 366 SFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKEPEE 424
Query: 257 R 257
R
Sbjct: 425 R 425
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 113/273 (41%), Gaps = 27/273 (9%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREK---RSNHIVALKVLFKSQLQQSQVEHQLRR---EVEI 69
+ I K +G G+FG V R K + VA+K L + E Q R E I
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-----KVGYTEKQRRDFLGEASI 70
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK-CKYFSERRAATYVASLARA 128
HPNI+RL G K V ++ EY G L L+K F+ + + +A
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT------LDYLPP 182
+ Y +HRD+ N+LI + K++DFG S + T + + P
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 183 EMVESVEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA 241
E + + + D+WS G++ +E + YG P+ + D + + + + PP +A
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE-GYRLPPPMDCPAA 249
Query: 242 AKDLISQMLVKDSSQRLP-------LHKLLEHP 267
L+ KD + R L KL+ +P
Sbjct: 250 LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 282
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 113/250 (45%), Gaps = 26/250 (10%)
Query: 13 WTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSH 72
W L+D LG+G +V+ R K++ + A+KV F + V+ Q+R E E+
Sbjct: 11 WLLSDI-----LGQGATANVFRGRHKKTGDLFAIKV-FNNISFLRPVDVQMR-EFEVLKK 63
Query: 73 LRHPNILRLYGYFYDQ--KRVYLILEYAAKGELYKELQKCKY---FSERRAATYVASLAR 127
L H NI++L+ + + LI+E+ G LY L++ E + +
Sbjct: 64 LNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG 123
Query: 128 ALIYCHGKHVIHRDIKPENLL--IGAQGE--LKIADFGWSVHTFNRRR--TMCGTLDYLP 181
+ + ++HR+IKP N++ IG G+ K+ DFG + + + + GT +YL
Sbjct: 124 GMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLH 183
Query: 182 PEMVESV--------EHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
P+M E ++ A VD+WS+GV Y G PF E + ++ +
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243
Query: 234 PKPIVSSAAK 243
P +S K
Sbjct: 244 PSGAISGVQK 253
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 113/273 (41%), Gaps = 27/273 (9%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREK---RSNHIVALKVLFKSQLQQSQVEHQLRR---EVEI 69
+ I K +G G+FG V R K + VA+K L + E Q R E I
Sbjct: 33 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-----KVGYTEKQRRDFLGEASI 87
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK-CKYFSERRAATYVASLARA 128
HPNI+RL G K V ++ EY G L L+K F+ + + +A
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 147
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT------LDYLPP 182
+ Y +HRD+ N+LI + K++DFG S + T + + P
Sbjct: 148 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 207
Query: 183 EMVESVEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA 241
E + + + D+WS G++ +E + YG P+ + D + + + + PP +A
Sbjct: 208 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE-GYRLPPPMDCPAA 266
Query: 242 AKDLISQMLVKDSSQRLP-------LHKLLEHP 267
L+ KD + R L KL+ +P
Sbjct: 267 LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 299
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 119/263 (45%), Gaps = 26/263 (9%)
Query: 13 WTLND--FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W + D +G+ +G G FG VY + + + VA+K+L + Q++ + EV +
Sbjct: 5 WEIPDGQITVGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVL 60
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARAL 129
RH NIL GY + ++ ++ ++ LY L + F + A+ +
Sbjct: 61 RKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 119
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFG-------WS-VHTFNRRRTMCGTLDYLP 181
Y H K +IHRD+K N+ + +KI DFG WS H F + + G++ ++
Sbjct: 120 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ---LSGSILWMA 176
Query: 182 PEMVESVEHDA---NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIV 238
PE++ + + D+++ G++ YE + G P+ + D +V P V
Sbjct: 177 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV 236
Query: 239 SS----AAKDLISQMLVKDSSQR 257
S A K L+++ L K +R
Sbjct: 237 RSNCPKAMKRLMAECLKKKRDER 259
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 20/263 (7%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREK---RSNHIVALKVLFKSQLQQSQVEHQLRR---EVEI 69
+ I K +G G+FG V R K + VA+K L + E Q R E I
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-----KVGYTEKQRRDFLGEASI 99
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK-CKYFSERRAATYVASLARA 128
HPNI+RL G K V ++ EY G L L+K F+ + + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT------LDYLPP 182
+ Y +HRD+ N+LI + K++DFG S + T + + P
Sbjct: 160 MKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 183 EMVESVEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA 241
E + + + D+WS G++ +E + YG P+ + D + + + + PP +A
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE-GYRLPPPMDCPAA 278
Query: 242 AKDLISQMLVKDSSQRLPLHKLL 264
L+ KD + R +++
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 119/263 (45%), Gaps = 26/263 (9%)
Query: 13 WTLND--FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W + D +G+ +G G FG VY + + + VA+K+L + Q++ + EV +
Sbjct: 23 WEIPDGQITVGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVL 78
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARAL 129
RH NIL GY + ++ ++ ++ LY L + F + A+ +
Sbjct: 79 RKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 137
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFG-------WS-VHTFNRRRTMCGTLDYLP 181
Y H K +IHRD+K N+ + +KI DFG WS H F + + G++ ++
Sbjct: 138 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ---LSGSILWMA 194
Query: 182 PEMVESVEHDA---NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIV 238
PE++ + + D+++ G++ YE + G P+ + D +V P V
Sbjct: 195 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV 254
Query: 239 SS----AAKDLISQMLVKDSSQR 257
S A K L+++ L K +R
Sbjct: 255 RSNCPKAMKRLMAECLKKKRDER 277
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 105/241 (43%), Gaps = 14/241 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V++ + VA+K L + +E ++ LRH +++LY
Sbjct: 275 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYA 329
Query: 84 YFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
++ +Y++ EY +KG L L + KY + A +A + Y + +HRD
Sbjct: 330 VVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 388
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+G K+ADFG + + + R+ + + PE D+W
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 448
Query: 198 SLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQ 256
S G+L E G P+ + + + V+ + P P + DL+ Q K+ +
Sbjct: 449 SFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKEPEE 507
Query: 257 R 257
R
Sbjct: 508 R 508
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 119/263 (45%), Gaps = 26/263 (9%)
Query: 13 WTLND--FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W + D +G+ +G G FG VY + + + VA+K+L + Q++ + EV +
Sbjct: 8 WEIPDGQITVGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVL 63
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARAL 129
RH NIL GY + ++ ++ ++ LY L + F + A+ +
Sbjct: 64 RKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 122
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFG-------WS-VHTFNRRRTMCGTLDYLP 181
Y H K +IHRD+K N+ + +KI DFG WS H F + + G++ ++
Sbjct: 123 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ---LSGSILWMA 179
Query: 182 PEMVESVEHDA---NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIV 238
PE++ + + D+++ G++ YE + G P+ + D +V P V
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV 239
Query: 239 SS----AAKDLISQMLVKDSSQR 257
S A K L+++ L K +R
Sbjct: 240 RSNCPKAMKRLMAECLKKKRDER 262
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 119/263 (45%), Gaps = 26/263 (9%)
Query: 13 WTLND--FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W + D +G+ +G G FG VY + + + VA+K+L + Q++ + EV +
Sbjct: 30 WEIPDGQITVGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVL 85
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARAL 129
RH NIL GY + ++ ++ ++ LY L + F + A+ +
Sbjct: 86 RKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 144
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFG-------WS-VHTFNRRRTMCGTLDYLP 181
Y H K +IHRD+K N+ + +KI DFG WS H F + + G++ ++
Sbjct: 145 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ---LSGSILWMA 201
Query: 182 PEMVESVEHDA---NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIV 238
PE++ + + D+++ G++ YE + G P+ + D +V P V
Sbjct: 202 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV 261
Query: 239 SS----AAKDLISQMLVKDSSQR 257
S A K L+++ L K +R
Sbjct: 262 RSNCPKAMKRLMAECLKKKRDER 284
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 119/263 (45%), Gaps = 26/263 (9%)
Query: 13 WTLND--FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W + D +G+ +G G FG VY + + + VA+K+L + Q++ + EV +
Sbjct: 31 WEIPDGQITVGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVL 86
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARAL 129
RH NIL GY + ++ ++ ++ LY L + F + A+ +
Sbjct: 87 RKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 145
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFG-------WS-VHTFNRRRTMCGTLDYLP 181
Y H K +IHRD+K N+ + +KI DFG WS H F + + G++ ++
Sbjct: 146 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ---LSGSILWMA 202
Query: 182 PEMVESVEHDA---NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIV 238
PE++ + + D+++ G++ YE + G P+ + D +V P V
Sbjct: 203 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV 262
Query: 239 SS----AAKDLISQMLVKDSSQR 257
S A K L+++ L K +R
Sbjct: 263 RSNCPKAMKRLMAECLKKKRDER 285
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 119/263 (45%), Gaps = 26/263 (9%)
Query: 13 WTLND--FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W + D +G+ +G G FG VY + + + VA+K+L + Q++ + EV +
Sbjct: 8 WEIPDGQITVGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVL 63
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARAL 129
RH NIL GY + ++ ++ ++ LY L + F + A+ +
Sbjct: 64 RKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 122
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFG-------WS-VHTFNRRRTMCGTLDYLP 181
Y H K +IHRD+K N+ + +KI DFG WS H F + + G++ ++
Sbjct: 123 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ---LSGSILWMA 179
Query: 182 PEMVESVEHDA---NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIV 238
PE++ + + D+++ G++ YE + G P+ + D +V P V
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV 239
Query: 239 SS----AAKDLISQMLVKDSSQR 257
S A K L+++ L K +R
Sbjct: 240 RSNCPKAMKRLMAECLKKKRDER 262
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 22/231 (9%)
Query: 5 VSAKEKKRWTLNDFDIG-------KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQS 57
+S+K +K W + ++I K LG G+FG V++A + KV K+ S
Sbjct: 164 MSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHT-----KVAVKTMKPGS 218
Query: 58 QVEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSER- 116
E + L+H +++L+ ++ +Y+I E+ AKG L L+ + +
Sbjct: 219 MSVEAFLAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPL 277
Query: 117 -RAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCG 175
+ + A +A + + ++ IHRD++ N+L+ A KIADFG + R
Sbjct: 278 PKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA------RVGAKF 331
Query: 176 TLDYLPPEMVESVEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRI 225
+ + PE + D+WS G+L E + YG P+ + + R +
Sbjct: 332 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 382
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 119/263 (45%), Gaps = 26/263 (9%)
Query: 13 WTLND--FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W + D +G+ +G G FG VY + + + VA+K+L + Q++ + EV +
Sbjct: 31 WEIPDGQITVGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVL 86
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARAL 129
RH NIL GY + ++ ++ ++ LY L + F + A+ +
Sbjct: 87 RKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 145
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFG-------WS-VHTFNRRRTMCGTLDYLP 181
Y H K +IHRD+K N+ + +KI DFG WS H F + + G++ ++
Sbjct: 146 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ---LSGSILWMA 202
Query: 182 PEMVESVEHDA---NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIV 238
PE++ + + D+++ G++ YE + G P+ + D +V P V
Sbjct: 203 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV 262
Query: 239 SS----AAKDLISQMLVKDSSQR 257
S A K L+++ L K +R
Sbjct: 263 RSNCPKAMKRLMAECLKKKRDER 285
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 119/263 (45%), Gaps = 26/263 (9%)
Query: 13 WTLND--FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W + D +G+ +G G FG VY + + + VA+K+L + Q++ + EV +
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVL 58
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARAL 129
RH NIL GY + ++ ++ ++ LY L + F + A+ +
Sbjct: 59 RKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 117
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFG-------WS-VHTFNRRRTMCGTLDYLP 181
Y H K +IHRD+K N+ + +KI DFG WS H F + + G++ ++
Sbjct: 118 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ---LSGSILWMA 174
Query: 182 PEMVESVEHDA---NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIV 238
PE++ + + D+++ G++ YE + G P+ + D +V P V
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV 234
Query: 239 SS----AAKDLISQMLVKDSSQR 257
S A K L+++ L K +R
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDER 257
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 119/263 (45%), Gaps = 26/263 (9%)
Query: 13 WTLND--FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W + D +G+ +G G FG VY + + + VA+K+L + Q++ + EV +
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVL 58
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARAL 129
RH NIL GY + ++ ++ ++ LY L + F + A+ +
Sbjct: 59 RKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 117
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFG-------WS-VHTFNRRRTMCGTLDYLP 181
Y H K +IHRD+K N+ + +KI DFG WS H F + + G++ ++
Sbjct: 118 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ---LSGSILWMA 174
Query: 182 PEMVESVEHDA---NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIV 238
PE++ + + D+++ G++ YE + G P+ + D +V P V
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV 234
Query: 239 SS----AAKDLISQMLVKDSSQR 257
S A K L+++ L K +R
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDER 257
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 123/264 (46%), Gaps = 26/264 (9%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG G G + + R N VA+K + + E QL RE + HPN++R +
Sbjct: 32 LGHGAEGTI-VYRGMFDNRDVAVKRILPECFSFADREVQLLRESD-----EHPNVIRYFC 85
Query: 84 YFYDQKRVYLILEY-AAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDI 142
D++ Y+ +E AA + Y E + + T + L + H +++HRD+
Sbjct: 86 TEKDRQFQYIAIELCAATLQEYVEQKDFAHLG-LEPITLLQQTTSGLAHLHSLNIVHRDL 144
Query: 143 KPENLLI---GAQGELK--IADFGW------SVHTFNRRRTMCGTLDYLPPEMV-ESVEH 190
KP N+LI A G++K I+DFG H+F+RR + GT ++ PEM+ E +
Sbjct: 145 KPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKE 204
Query: 191 DA--NVDIWSLGVLCYEFLY-GVPPF--EAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDL 245
+ VDI+S G + Y + G PF + ++ +D P K A++L
Sbjct: 205 NPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKH-EDVIAREL 263
Query: 246 ISQMLVKDSSQRLPLHKLLEHPWI 269
I +M+ D +R +L+HP+
Sbjct: 264 IEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 20/263 (7%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREK---RSNHIVALKVLFKSQLQQSQVEHQLRR---EVEI 69
+ I K +G G+FG V R K + VA+K L + E Q R E I
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-----KVGYTEKQRRDFLGEASI 99
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK-CKYFSERRAATYVASLARA 128
HPNI+RL G K V ++ EY G L L+K F+ + + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT------LDYLPP 182
+ Y +HRD+ N+LI + K++DFG S + T + + P
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 183 EMVESVEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA 241
E + + + D+WS G++ +E + YG P+ + D + + + + PP +A
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE-GYRLPPPMDCPAA 278
Query: 242 AKDLISQMLVKDSSQRLPLHKLL 264
L+ KD + R +++
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 20/263 (7%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREK---RSNHIVALKVLFKSQLQQSQVEHQLRR---EVEI 69
+ I K +G G+FG V R K + VA+K L + E Q R E I
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-----KVGYTEKQRRDFLGEASI 99
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK-CKYFSERRAATYVASLARA 128
HPNI+RL G K V ++ EY G L L+K F+ + + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT------LDYLPP 182
+ Y +HRD+ N+LI + K++DFG S + T + + P
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 183 EMVESVEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA 241
E + + + D+WS G++ +E + YG P+ + D + + + + PP +A
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE-GYRLPPPMDCPAA 278
Query: 242 AKDLISQMLVKDSSQRLPLHKLL 264
L+ KD + R +++
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 20/263 (7%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREK---RSNHIVALKVLFKSQLQQSQVEHQLRR---EVEI 69
+ I K +G G+FG V R K + VA+K L + E Q R E I
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-----KVGYTEKQRRDFLGEASI 99
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK-CKYFSERRAATYVASLARA 128
HPNI+RL G K V ++ EY G L L+K F+ + + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT------LDYLPP 182
+ Y +HRD+ N+LI + K++DFG S + T + + P
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 183 EMVESVEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA 241
E + + + D+WS G++ +E + YG P+ + D + + + + PP +A
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE-GYRLPPPMDCPAA 278
Query: 242 AKDLISQMLVKDSSQRLPLHKLL 264
L+ KD + R +++
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 20/263 (7%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREK---RSNHIVALKVLFKSQLQQSQVEHQLRR---EVEI 69
+ I K +G G+FG V R K + VA+K L + E Q R E I
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-----KVGYTEKQRRDFLGEASI 99
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK-CKYFSERRAATYVASLARA 128
HPNI+RL G K V ++ EY G L L+K F+ + + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT------LDYLPP 182
+ Y +HRD+ N+LI + K++DFG S + T + + P
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 183 EMVESVEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA 241
E + + + D+WS G++ +E + YG P+ + D + + + + PP +A
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE-GYRLPPPMDCPAA 278
Query: 242 AKDLISQMLVKDSSQRLPLHKLL 264
L+ KD + R +++
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 20/263 (7%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREK---RSNHIVALKVLFKSQLQQSQVEHQLRR---EVEI 69
+ I K +G G+FG V R K + VA+K L + E Q R E I
Sbjct: 43 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-----KVGYTEKQRRDFLGEASI 97
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK-CKYFSERRAATYVASLARA 128
HPNI+RL G K V ++ EY G L L+K F+ + + +A
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 157
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT------LDYLPP 182
+ Y +HRD+ N+LI + K++DFG S + T + + P
Sbjct: 158 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 217
Query: 183 EMVESVEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA 241
E + + + D+WS G++ +E + YG P+ + D + + + + PP +A
Sbjct: 218 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE-GYRLPPPMDCPAA 276
Query: 242 AKDLISQMLVKDSSQRLPLHKLL 264
L+ KD + R +++
Sbjct: 277 LYQLMLDCWQKDRNNRPKFEQIV 299
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 108/227 (47%), Gaps = 38/227 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVE-HQLRREVEIQSHLR 74
++++I +GRG +G+VYLA +K +N VA+K + +++ + ++ ++ RE+ I + L+
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKV--NRMFEDLIDCKRILREITILNRLK 85
Query: 75 HPNILRLYGYFYDQK-----RVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARAL 129
I+RL+ + +Y++LE A +L K + + +E+ T + +L
Sbjct: 86 SDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEQHVKTILYNLLLGE 144
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS-------------------------V 164
+ H +IHRD+KP N L+ +KI DFG +
Sbjct: 145 KFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGP 204
Query: 165 HTFNRRRTMCG---TLDYLPPEMVESVEHDAN-VDIWSLGVLCYEFL 207
H N ++ + T Y PE++ E+ N +DIWS G + E L
Sbjct: 205 HNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 105/241 (43%), Gaps = 14/241 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V++ + VA+K L + +E ++ LRH +++LY
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 246
Query: 84 YFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
++ +Y++ EY +KG L L + KY + A +A + Y + +HRD
Sbjct: 247 VVSEEP-IYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+G K+ADFG + + + R+ + + PE D+W
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 198 SLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQ 256
S G+L E G P+ + + + V+ + P P + DL+ Q K+ +
Sbjct: 366 SFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKEPEE 424
Query: 257 R 257
R
Sbjct: 425 R 425
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 95/231 (41%), Gaps = 19/231 (8%)
Query: 24 LGRGKFGHVYLAR-EKRSNHIVALKVLFKS--QLQQSQVEHQLRREVEIQSHLRHPNILR 80
LG G FG VY + N L+V K+ ++ Q E E I S L H NI+R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 81 LYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASL-------ARALIYCH 133
G +++LE A G+L L++ + + ++ + L A Y
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 134 GKHVIHRDIKPENLLIGAQGE---LKIADFGWSVHTFNR---RRTMCGTL--DYLPPEMV 185
H IHRDI N L+ G KI DFG + + R+ C L ++PPE
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 232
Query: 186 ESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFPPK 235
+ D WS GVL +E F G P+ +K + + + PPK
Sbjct: 233 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 283
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 95/231 (41%), Gaps = 19/231 (8%)
Query: 24 LGRGKFGHVYLAR-EKRSNHIVALKVLFKS--QLQQSQVEHQLRREVEIQSHLRHPNILR 80
LG G FG VY + N L+V K+ ++ Q E E I S L H NI+R
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 81 LYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASL-------ARALIYCH 133
G +++LE A G+L L++ + + ++ + L A Y
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 134 GKHVIHRDIKPENLLIGAQGE---LKIADFGWSVHTFNR---RRTMCGTL--DYLPPEMV 185
H IHRDI N L+ G KI DFG + + R+ C L ++PPE
Sbjct: 159 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 218
Query: 186 ESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFPPK 235
+ D WS GVL +E F G P+ +K + + + PPK
Sbjct: 219 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 269
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 14/241 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V++ + VA+K L + +E ++ LRH +++LY
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 77
Query: 84 YFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
++ +Y++ EY KG L L + KY + A +A + Y + +HRD
Sbjct: 78 VVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+G K+ADFG + + + R+ + + PE D+W
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 198 SLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQ 256
S G+L E G P+ + + + V+ + P P + DL+ Q K+ +
Sbjct: 197 SFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKEPEE 255
Query: 257 R 257
R
Sbjct: 256 R 256
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 112/264 (42%), Gaps = 23/264 (8%)
Query: 24 LGRGKFGHVYLAREK---RSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILR 80
+G G+FG V R K + VA+K L K + Q + E I HPNI+R
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQ-RREFLSEASIMGQFEHPNIIR 79
Query: 81 LYGYFYDQKRVYLILEYAAKGELYKELQ-KCKYFSERRAATYVASLARALIYCHGKHVIH 139
L G + V ++ E+ G L L+ F+ + + +A + Y +H
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVH 139
Query: 140 RDIKPENLLIGAQGELKIADFGWS--VHTFNRRRTMCGTLD------YLPPEMVESVEHD 191
RD+ N+L+ + K++DFG S + + T +L + PE + +
Sbjct: 140 RDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFT 199
Query: 192 ANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQML 250
+ D WS G++ +E + +G P+ + D I Q D + PP P ++ L+
Sbjct: 200 SASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ-DYRLPPPPDCPTSLHQLMLDCW 258
Query: 251 VKDSSQ--RLP-----LHKLLEHP 267
KD + R P L K++ +P
Sbjct: 259 QKDRNARPRFPQVVSALDKMIRNP 282
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 118/263 (44%), Gaps = 26/263 (9%)
Query: 13 WTLND--FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
W + D +G+ +G G FG VY + + + VA+K+L + Q++ + EV +
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTAPTPQQLQ-AFKNEVGVL 58
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARAL 129
RH NIL GY ++ ++ ++ LY L + F + A+ +
Sbjct: 59 RKTRHVNILLFMGY-STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 117
Query: 130 IYCHGKHVIHRDIKPENLLIGAQGELKIADFG-------WS-VHTFNRRRTMCGTLDYLP 181
Y H K +IHRD+K N+ + +KI DFG WS H F + + G++ ++
Sbjct: 118 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ---LSGSILWMA 174
Query: 182 PEMVESVEHDA---NVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIV 238
PE++ + + D+++ G++ YE + G P+ + D +V P V
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV 234
Query: 239 SS----AAKDLISQMLVKDSSQR 257
S A K L+++ L K +R
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDER 257
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 105/251 (41%), Gaps = 16/251 (6%)
Query: 20 IGKPLGRGKFGHV---YLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
I + +G G+FG V +L + VA+K L KS + Q E I HP
Sbjct: 37 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTL-KSGYTEKQ-RRDFLSEASIMGQFDHP 94
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKEL-QKCKYFSERRAATYVASLARALIYCHGK 135
N++ L G V +I E+ G L L Q F+ + + +A + Y
Sbjct: 95 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM 154
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWS--VHTFNRRRTMCGTLD------YLPPEMVES 187
+ +HRD+ N+L+ + K++DFG S + T L + PE ++
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 214
Query: 188 VEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ + D+WS G++ +E + YG P+ + D I Q D + PP SA L+
Sbjct: 215 RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ-DYRLPPPMDCPSALHQLM 273
Query: 247 SQMLVKDSSQR 257
KD + R
Sbjct: 274 LDCWQKDRNHR 284
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 14/241 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V++ + VA+K L + +E ++ LRH +++LY
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 77
Query: 84 YFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
++ +Y++ EY KG L L + KY + A +A + Y + +HRD
Sbjct: 78 VVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+G K+ADFG + + + R+ + + PE D+W
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 198 SLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQ 256
S G+L E G P+ + + + V+ + P P + DL+ Q K+ +
Sbjct: 197 SFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKEPEE 255
Query: 257 R 257
R
Sbjct: 256 R 256
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 23/264 (8%)
Query: 24 LGRGKFGHVYLAREK---RSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILR 80
+G G+FG V R K + VA+K L ++ + + E I HPNI+R
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR--REFLSEASIMGQFEHPNIIR 81
Query: 81 LYGYFYDQKRVYLILEYAAKGELYKELQ-KCKYFSERRAATYVASLARALIYCHGKHVIH 139
L G + V ++ E+ G L L+ F+ + + +A + Y +H
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVH 141
Query: 140 RDIKPENLLIGAQGELKIADFGWS--VHTFNRRRTMCGTLD------YLPPEMVESVEHD 191
RD+ N+L+ + K++DFG S + + T +L + PE + +
Sbjct: 142 RDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFT 201
Query: 192 ANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQML 250
+ D WS G++ +E + +G P+ + D I Q D + PP P ++ L+
Sbjct: 202 SASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ-DYRLPPPPDCPTSLHQLMLDCW 260
Query: 251 VKDSSQ--RLP-----LHKLLEHP 267
KD + R P L K++ +P
Sbjct: 261 QKDRNARPRFPQVVSALDKMIRNP 284
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 110/263 (41%), Gaps = 20/263 (7%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREK---RSNHIVALKVLFKSQLQQSQVEHQLRR---EVEI 69
+ I K +G G+FG V R K + VA+K L + E Q R E I
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-----KVGYTEKQRRDFLGEASI 99
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK-CKYFSERRAATYVASLARA 128
HPNI+RL G K V ++ EY G L L+K F+ + + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT------LDYLPP 182
+ Y +HRD+ N+LI + K++DFG + + T + + P
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 183 EMVESVEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA 241
E + + + D+WS G++ +E + YG P+ + D + + + + PP +A
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE-GYRLPPPMDCPAA 278
Query: 242 AKDLISQMLVKDSSQRLPLHKLL 264
L+ KD + R +++
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 23/230 (10%)
Query: 4 EVSAKEKKRWTLNDFDIGKP-------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ 56
EV + KR++L + + LGRG FG VY R +VA+K L + + Q
Sbjct: 19 EVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERXQG 77
Query: 57 SQVEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSE- 115
++ Q + EVE+ S H N+LRL G+ L+ Y A G + L++
Sbjct: 78 GEL--QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP 135
Query: 116 ----RRAATYVASLARALIYCHG---KHVIHRDIKPENLLIGAQGELKIADFGWS----V 164
+R + S AR L Y H +IHRD+K N+L+ + E + DFG +
Sbjct: 136 LDWPKRQRIALGS-ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 194
Query: 165 HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFE 214
+ + GT+ ++ PE + + + D++ GV+ E + G F+
Sbjct: 195 KDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 244
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 13/196 (6%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEH--QLRREVEIQSHLRHPNILRL 81
LG G FG V L R +V KS +S H L++E+EI +L H NI++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 82 YGYFYDQ--KRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARALIYCHGKHVI 138
G + + LI+E+ G L + L K K + ++ Y + + + Y + +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV 148
Query: 139 HRDIKPENLLIGAQGELKIADFGWS--VHTFNRRRTMCGTLD-----YLPPEMVESVEHD 191
HRD+ N+L+ ++ ++KI DFG + + T T+ D Y P +++S +
Sbjct: 149 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYI 208
Query: 192 ANVDIWSLGVLCYEFL 207
A+ D+WS GV +E L
Sbjct: 209 AS-DVWSFGVTLHELL 223
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 20/263 (7%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREK---RSNHIVALKVLFKSQLQQSQVEHQLRR---EVEI 69
+ I K +G G+FG V R K + VA+K L + E Q R E I
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-----KVGYTEKQRRDFLGEASI 99
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK-CKYFSERRAATYVASLARA 128
HPNI+RL G K V ++ EY G L L+K F+ + + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT------LDYLPP 182
+ Y +HRD+ N+LI + K++DFG + T + + P
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 183 EMVESVEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA 241
E + + + D+WS G++ +E + YG P+ + D + + + + PP +A
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE-GYRLPPPMDCPAA 278
Query: 242 AKDLISQMLVKDSSQRLPLHKLL 264
L+ KD + R +++
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 14/204 (6%)
Query: 22 KPLGRGKFGHVYLAREKRSNH----IVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
K +G G+FG VY K S+ VA+K L ++ +V+ E I H N
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD--FLGEAGIMGQFSHHN 107
Query: 78 ILRLYGYFYDQKRVYLILEYAAKGELYKEL-QKCKYFSERRAATYVASLARALIYCHGKH 136
I+RL G K + +I EY G L K L +K FS + + +A + Y +
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 167
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWS-VHTFNRRRTMCGTLDYLP-----PEMVESVEH 190
+HRD+ N+L+ + K++DFG S V + T + +P PE + +
Sbjct: 168 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKF 227
Query: 191 DANVDIWSLGVLCYEFL-YGVPPF 213
+ D+WS G++ +E + YG P+
Sbjct: 228 TSASDVWSFGIVMWEVMTYGERPY 251
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 94/231 (40%), Gaps = 19/231 (8%)
Query: 24 LGRGKFGHVYLAR-EKRSNHIVALKVLFKS--QLQQSQVEHQLRREVEIQSHLRHPNILR 80
LG G FG VY + N L+V K+ ++ Q E E I S H NI+R
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 81 LYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASL-------ARALIYCH 133
G +++LE A G+L L++ + + ++ + L A Y
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 134 GKHVIHRDIKPENLLIGAQGE---LKIADFGWSVHTFNR---RRTMCGTL--DYLPPEMV 185
H IHRDI N L+ G KI DFG + + R+ C L ++PPE
Sbjct: 159 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAF 218
Query: 186 ESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFPPK 235
+ D WS GVL +E F G P+ +K + + + PPK
Sbjct: 219 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 269
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 13/198 (6%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEH--QLRREVEIQSHLRHPNIL 79
+ LG G FG V L R +V KS +S H L++E+EI +L H NI+
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 80 RLYGYFYDQ--KRVYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARALIYCHGKH 136
+ G + + LI+E+ G L + L K K + ++ Y + + + Y +
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 134
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWS--VHTFNRRRTMCGTLD-----YLPPEMVESVE 189
+HRD+ N+L+ ++ ++KI DFG + + T T+ D Y P +++S
Sbjct: 135 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKF 194
Query: 190 HDANVDIWSLGVLCYEFL 207
+ A+ D+WS GV +E L
Sbjct: 195 YIAS-DVWSFGVTLHELL 211
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 94/231 (40%), Gaps = 19/231 (8%)
Query: 24 LGRGKFGHVYLAR-EKRSNHIVALKVLFKS--QLQQSQVEHQLRREVEIQSHLRHPNILR 80
LG G FG VY + N L+V K+ ++ Q E E I S H NI+R
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 81 LYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASL-------ARALIYCH 133
G +++LE A G+L L++ + + ++ + L A Y
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 134 GKHVIHRDIKPENLLIGAQGE---LKIADFGWSVHTFNR---RRTMCGTLD--YLPPEMV 185
H IHRDI N L+ G KI DFG + + R+ C L ++PPE
Sbjct: 150 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 209
Query: 186 ESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFPPK 235
+ D WS GVL +E F G P+ +K + + + PPK
Sbjct: 210 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 260
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 108/235 (45%), Gaps = 16/235 (6%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K LG G+FG V L + K + VA+K++ + S E + +E + L HP +++
Sbjct: 14 KELGSGQFGVVKLGKWK-GQYDVAVKMI----KEGSMSEDEFFQEAQTMMKLSHPKLVKF 68
Query: 82 YGYFYDQKRVYLILEYAAKGELYKELQK-CKYFSERRAATYVASLARALIYCHGKHVIHR 140
YG + +Y++ EY + G L L+ K + + + + IHR
Sbjct: 69 YGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHR 128
Query: 141 DIKPENLLIGAQGELKIADFGWSVHTFNRRR-TMCGT---LDYLPPEMVESVEHDANVDI 196
D+ N L+ +K++DFG + + + + + GT + + PE+ ++ + D+
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 197 WSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQML 250
W+ G+L +E F G P++ +S+ ++ Q + P A D I Q++
Sbjct: 189 WAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPH-----LASDTIYQIM 238
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 14/204 (6%)
Query: 21 GKPLGRGKFGHVYLAREKRSNHIVALKVLFKS-QLQQSQVEHQLRREVEIQSHLRHPNIL 79
G G G FG VY + +N VA+K L + +++ Q +E+++ + +H N++
Sbjct: 27 GNKXGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLV 84
Query: 80 RLYGYFYDQKRVYLILEYAAKGELYKELQ---KCKYFSERRAATYVASLARALIYCHGKH 136
L G+ D + L+ Y G L L S A + + H H
Sbjct: 85 ELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENH 144
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVESVEH 190
IHRDIK N+L+ KI+DFG + R + GT Y PE + E
Sbjct: 145 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSR-IVGTTAYXAPEALRG-EI 202
Query: 191 DANVDIWSLGVLCYEFLYGVPPFE 214
DI+S GV+ E + G+P +
Sbjct: 203 TPKSDIYSFGVVLLEIITGLPAVD 226
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 94/231 (40%), Gaps = 19/231 (8%)
Query: 24 LGRGKFGHVYLAR-EKRSNHIVALKVLFKS--QLQQSQVEHQLRREVEIQSHLRHPNILR 80
LG G FG VY + N L+V K+ ++ Q E E I S H NI+R
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 81 LYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASL-------ARALIYCH 133
G +++LE A G+L L++ + + ++ + L A Y
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 134 GKHVIHRDIKPENLLIGAQGE---LKIADFGWSVHTFNR---RRTMCGTL--DYLPPEMV 185
H IHRDI N L+ G KI DFG + + R+ C L ++PPE
Sbjct: 158 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 217
Query: 186 ESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFPPK 235
+ D WS GVL +E F G P+ +K + + + PPK
Sbjct: 218 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 268
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 94/231 (40%), Gaps = 19/231 (8%)
Query: 24 LGRGKFGHVYLAR-EKRSNHIVALKVLFKS--QLQQSQVEHQLRREVEIQSHLRHPNILR 80
LG G FG VY + N L+V K+ ++ Q E E I S H NI+R
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 81 LYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASL-------ARALIYCH 133
G +++LE A G+L L++ + + ++ + L A Y
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 134 GKHVIHRDIKPENLLIGAQGE---LKIADFGWSVHTFNR---RRTMCGTL--DYLPPEMV 185
H IHRDI N L+ G KI DFG + + R+ C L ++PPE
Sbjct: 176 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAF 235
Query: 186 ESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFPPK 235
+ D WS GVL +E F G P+ +K + + + PPK
Sbjct: 236 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 286
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 94/231 (40%), Gaps = 19/231 (8%)
Query: 24 LGRGKFGHVYLAR-EKRSNHIVALKVLFKS--QLQQSQVEHQLRREVEIQSHLRHPNILR 80
LG G FG VY + N L+V K+ ++ Q E E I S H NI+R
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 81 LYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASL-------ARALIYCH 133
G +++LE A G+L L++ + + ++ + L A Y
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 134 GKHVIHRDIKPENLLIGAQGE---LKIADFGWSVHTFNR---RRTMCGTL--DYLPPEMV 185
H IHRDI N L+ G KI DFG + + R+ C L ++PPE
Sbjct: 159 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 218
Query: 186 ESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFPPK 235
+ D WS GVL +E F G P+ +K + + + PPK
Sbjct: 219 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 269
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 94/231 (40%), Gaps = 19/231 (8%)
Query: 24 LGRGKFGHVYLAR-EKRSNHIVALKVLFKS--QLQQSQVEHQLRREVEIQSHLRHPNILR 80
LG G FG VY + N L+V K+ ++ Q E E I S H NI+R
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 81 LYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASL-------ARALIYCH 133
G +++LE A G+L L++ + + ++ + L A Y
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 134 GKHVIHRDIKPENLLIGAQGE---LKIADFGWSVHTFNR---RRTMCGTL--DYLPPEMV 185
H IHRDI N L+ G KI DFG + + R+ C L ++PPE
Sbjct: 175 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 234
Query: 186 ESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFPPK 235
+ D WS GVL +E F G P+ +K + + + PPK
Sbjct: 235 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 285
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 94/231 (40%), Gaps = 19/231 (8%)
Query: 24 LGRGKFGHVYLAR-EKRSNHIVALKVLFKS--QLQQSQVEHQLRREVEIQSHLRHPNILR 80
LG G FG VY + N L+V K+ ++ Q E E I S H NI+R
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 81 LYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASL-------ARALIYCH 133
G +++LE A G+L L++ + + ++ + L A Y
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 134 GKHVIHRDIKPENLLIGAQGE---LKIADFGWSVHTFNR---RRTMCGTL--DYLPPEMV 185
H IHRDI N L+ G KI DFG + + R+ C L ++PPE
Sbjct: 165 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 224
Query: 186 ESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFPPK 235
+ D WS GVL +E F G P+ +K + + + PPK
Sbjct: 225 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 275
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 94/231 (40%), Gaps = 19/231 (8%)
Query: 24 LGRGKFGHVYLAR-EKRSNHIVALKVLFKS--QLQQSQVEHQLRREVEIQSHLRHPNILR 80
LG G FG VY + N L+V K+ ++ Q E E I S H NI+R
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 81 LYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASL-------ARALIYCH 133
G +++LE A G+L L++ + + ++ + L A Y
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 134 GKHVIHRDIKPENLLIGAQGE---LKIADFGWSVHTFNR---RRTMCGTL--DYLPPEMV 185
H IHRDI N L+ G KI DFG + + R+ C L ++PPE
Sbjct: 199 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAF 258
Query: 186 ESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFPPK 235
+ D WS GVL +E F G P+ +K + + + PPK
Sbjct: 259 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 309
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 94/231 (40%), Gaps = 19/231 (8%)
Query: 24 LGRGKFGHVYLAR-EKRSNHIVALKVLFKS--QLQQSQVEHQLRREVEIQSHLRHPNILR 80
LG G FG VY + N L+V K+ ++ Q E E I S H NI+R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 81 LYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASL-------ARALIYCH 133
G +++LE A G+L L++ + + ++ + L A Y
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 134 GKHVIHRDIKPENLLIGAQGE---LKIADFGWSVHTFNR---RRTMCGTL--DYLPPEMV 185
H IHRDI N L+ G KI DFG + + R+ C L ++PPE
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 232
Query: 186 ESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFPPK 235
+ D WS GVL +E F G P+ +K + + + PPK
Sbjct: 233 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 283
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 13/221 (5%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAR-EKRSNHIVALKVLFKSQLQQSQVEHQLRREV 67
++K TL D K LG G FG V + + + K++ ++ +L E
Sbjct: 8 DRKLLTLED----KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 63
Query: 68 EIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
+ L +P I+R+ G + + L++E A G L K LQ+ ++ ++ V ++
Sbjct: 64 NVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM 122
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSV------HTFNRRRTMCGTLDYLP 181
+ Y + +HRD+ N+L+ Q KI+DFG S + + + + +
Sbjct: 123 GMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYA 182
Query: 182 PEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDT 221
PE + + + D+WS GVL +E F YG P+ + S+
Sbjct: 183 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 20/263 (7%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREK---RSNHIVALKVLFKSQLQQSQVEHQLRR---EVEI 69
+ I K +G G+FG V R K + VA+K L + E Q R E I
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-----KVGYTEKQRRDFLGEASI 99
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK-CKYFSERRAATYVASLARA 128
HPNI+RL G K V ++ E G L L+K F+ + + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT------LDYLPP 182
+ Y +HRD+ N+LI + K++DFG S + T + + P
Sbjct: 160 MKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 183 EMVESVEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA 241
E + + + D+WS G++ +E + YG P+ + D + + + + PP +A
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE-GYRLPPPMDCPAA 278
Query: 242 AKDLISQMLVKDSSQRLPLHKLL 264
L+ KD + R +++
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 105/233 (45%), Gaps = 17/233 (7%)
Query: 1 ACSEVSAKE----KKRWTLNDFDIGKPLGRGKFGHVYLAR-EKRSNHIVALKVLFKSQLQ 55
A E+ KE +K TL D K LG G FG V + + + K++
Sbjct: 2 ALEEIRPKEVYLDRKLLTLED----KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN 57
Query: 56 QSQVEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSE 115
++ +L E + L +P I+R+ G + + L++E A G L K LQ+ ++ +
Sbjct: 58 DPALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD 116
Query: 116 RRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRR 170
+ V ++ + Y + +HRD+ N+L+ Q KI+DFG S + +
Sbjct: 117 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 176
Query: 171 RTMCG-TLDYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDT 221
+T + + PE + + + D+WS GVL +E F YG P+ + S+
Sbjct: 177 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 229
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 94/231 (40%), Gaps = 19/231 (8%)
Query: 24 LGRGKFGHVYLAR-EKRSNHIVALKVLFKS--QLQQSQVEHQLRREVEIQSHLRHPNILR 80
LG G FG VY + N L+V K+ ++ Q E E I S H NI+R
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 81 LYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASL-------ARALIYCH 133
G ++++E A G+L L++ + + ++ + L A Y
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 134 GKHVIHRDIKPENLLIGAQGE---LKIADFGWSVHTFNR---RRTMCGTL--DYLPPEMV 185
H IHRDI N L+ G KI DFG + + R+ C L ++PPE
Sbjct: 158 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 217
Query: 186 ESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFPPK 235
+ D WS GVL +E F G P+ +K + + + PPK
Sbjct: 218 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 268
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 94/231 (40%), Gaps = 19/231 (8%)
Query: 24 LGRGKFGHVYLAR-EKRSNHIVALKVLFKS--QLQQSQVEHQLRREVEIQSHLRHPNILR 80
LG G FG VY + N L+V K+ ++ Q E E I S H NI+R
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 81 LYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASL-------ARALIYCH 133
G +++LE A G+L L++ + + ++ + L A Y
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 134 GKHVIHRDIKPENLLIGAQGE---LKIADFGWSVHTFNR---RRTMCGTL--DYLPPEMV 185
H IHRDI N L+ G KI DFG + + R+ C L ++PPE
Sbjct: 185 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 244
Query: 186 ESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFPPK 235
+ D WS GVL +E F G P+ +K + + + PPK
Sbjct: 245 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 295
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 128/288 (44%), Gaps = 33/288 (11%)
Query: 18 FDIGKPLGRGKFGHV---YLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
F +G+ LG+G+FG V L +E S VA+K+L + S +E LR E
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR-EAACMKEFD 83
Query: 75 HPNILRLYGYFYDQKR------VYLILEYAAKGELYKELQKCKYFSE------RRAATYV 122
HP++ +L G + +IL + G+L+ L + + ++
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143
Query: 123 ASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS--VHTFNRRRTMCGT---L 177
+A + Y ++ IHRD+ N ++ + +ADFG S +++ + R C + +
Sbjct: 144 VDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPV 203
Query: 178 DYLPPEMVESVEHDANVDIWSLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQVD-LKFPPK 235
+L E + + + D+W+ GV +E + G P+ E+++ Y ++ + LK PP+
Sbjct: 204 KWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPE 263
Query: 236 PIVSSAAKDLISQMLVKDSSQ-------RLPLHKLLEHPWIIQNA-DP 275
+ DL+ Q D Q R+ L +L H ++ + DP
Sbjct: 264 CM--EEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDP 309
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 112/273 (41%), Gaps = 27/273 (9%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREK---RSNHIVALKVLFKSQLQQSQVEHQLRR---EVEI 69
+ I K +G G+FG V R K + VA+K L + E Q R E I
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-----KVGYTEKQRRDFLGEASI 70
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK-CKYFSERRAATYVASLARA 128
HPNI+RL G K V ++ E G L L+K F+ + + +A
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT------LDYLPP 182
+ Y +HRD+ N+LI + K++DFG S + T + + P
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 183 EMVESVEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA 241
E + + + D+WS G++ +E + YG P+ + D + + + + PP +A
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE-GYRLPPPMDCPAA 249
Query: 242 AKDLISQMLVKDSSQRLP-------LHKLLEHP 267
L+ KD + R L KL+ +P
Sbjct: 250 LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 282
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 94/231 (40%), Gaps = 19/231 (8%)
Query: 24 LGRGKFGHVYLAR-EKRSNHIVALKVLFKS--QLQQSQVEHQLRREVEIQSHLRHPNILR 80
LG G FG VY + N L+V K+ ++ Q E E I S H NI+R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 81 LYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASL-------ARALIYCH 133
G ++++E A G+L L++ + + ++ + L A Y
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 134 GKHVIHRDIKPENLLIGAQGE---LKIADFGWSVHTFNR---RRTMCGTL--DYLPPEMV 185
H IHRDI N L+ G KI DFG + + R+ C L ++PPE
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 232
Query: 186 ESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFPPK 235
+ D WS GVL +E F G P+ +K + + + PPK
Sbjct: 233 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 283
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 13/221 (5%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAR-EKRSNHIVALKVLFKSQLQQSQVEHQLRREV 67
++K TL D K LG G FG V + + + K++ ++ +L E
Sbjct: 22 DRKLLTLED----KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 77
Query: 68 EIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
+ L +P I+R+ G + + L++E A G L K LQ+ ++ ++ V ++
Sbjct: 78 NVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM 136
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCG-TLDYLP 181
+ Y + +HRD+ N+L+ Q KI+DFG S + + +T + +
Sbjct: 137 GMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 196
Query: 182 PEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDT 221
PE + + + D+WS GVL +E F YG P+ + S+
Sbjct: 197 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 237
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 13/221 (5%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAR-EKRSNHIVALKVLFKSQLQQSQVEHQLRREV 67
++K TL D K LG G FG V + + + K++ ++ +L E
Sbjct: 24 DRKLLTLED----KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 79
Query: 68 EIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
+ L +P I+R+ G + + L++E A G L K LQ+ ++ ++ V ++
Sbjct: 80 NVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM 138
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCG-TLDYLP 181
+ Y + +HRD+ N+L+ Q KI+DFG S + + +T + +
Sbjct: 139 GMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 198
Query: 182 PEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDT 221
PE + + + D+WS GVL +E F YG P+ + S+
Sbjct: 199 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 13/221 (5%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAR-EKRSNHIVALKVLFKSQLQQSQVEHQLRREV 67
++K TL D K LG G FG V + + + K++ ++ +L E
Sbjct: 24 DRKLLTLED----KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 79
Query: 68 EIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
+ L +P I+R+ G + + L++E A G L K LQ+ ++ ++ V ++
Sbjct: 80 NVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM 138
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCG-TLDYLP 181
+ Y + +HRD+ N+L+ Q KI+DFG S + + +T + +
Sbjct: 139 GMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 198
Query: 182 PEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDT 221
PE + + + D+WS GVL +E F YG P+ + S+
Sbjct: 199 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 13/221 (5%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAR-EKRSNHIVALKVLFKSQLQQSQVEHQLRREV 67
++K TL D K LG G FG V + + + K++ ++ +L E
Sbjct: 8 DRKLLTLED----KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 63
Query: 68 EIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
+ L +P I+R+ G + + L++E A G L K LQ+ ++ ++ V ++
Sbjct: 64 NVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM 122
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCG-TLDYLP 181
+ Y + +HRD+ N+L+ Q KI+DFG S + + +T + +
Sbjct: 123 GMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 182
Query: 182 PEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDT 221
PE + + + D+WS GVL +E F YG P+ + S+
Sbjct: 183 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 20/263 (7%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREK---RSNHIVALKVLFKSQLQQSQVEHQLRR---EVEI 69
+ I K +G G+FG V R K + VA+K L + E Q R E I
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-----KVGYTEKQRRDFLGEASI 99
Query: 70 QSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK-CKYFSERRAATYVASLARA 128
HPNI+RL G K V ++ E G L L+K F+ + + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT------LDYLPP 182
+ Y +HRD+ N+LI + K++DFG S + T + + P
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 183 EMVESVEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSA 241
E + + + D+WS G++ +E + YG P+ + D + + + + PP +A
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE-GYRLPPPMDCPAA 278
Query: 242 AKDLISQMLVKDSSQRLPLHKLL 264
L+ KD + R +++
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 13/221 (5%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAR-EKRSNHIVALKVLFKSQLQQSQVEHQLRREV 67
++K TL D K LG G FG V + + + K++ ++ +L E
Sbjct: 2 DRKLLTLED----KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 57
Query: 68 EIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
+ L +P I+R+ G + + L++E A G L K LQ+ ++ ++ V ++
Sbjct: 58 NVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM 116
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCG-TLDYLP 181
+ Y + +HRD+ N+L+ Q KI+DFG S + + +T + +
Sbjct: 117 GMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 176
Query: 182 PEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDT 221
PE + + + D+WS GVL +E F YG P+ + S+
Sbjct: 177 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 217
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 13/221 (5%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAR-EKRSNHIVALKVLFKSQLQQSQVEHQLRREV 67
++K TL D K LG G FG V + + + K++ ++ +L E
Sbjct: 366 DRKLLTLED----KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 421
Query: 68 EIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
+ L +P I+R+ G + + L++E A G L K LQ+ ++ ++ V ++
Sbjct: 422 NVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM 480
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCG-TLDYLP 181
+ Y + +HRD+ N+L+ Q KI+DFG S + + +T + +
Sbjct: 481 GMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 540
Query: 182 PEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDT 221
PE + + + D+WS GVL +E F YG P+ + S+
Sbjct: 541 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 581
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
N+FD +G G FG VY R VALK + + SQ + E+E S RH
Sbjct: 39 NNFDHKFLIGHGVFGKVYKGV-LRDGAKVALK---RRTPESSQGIEEFETEIETLSFCRH 94
Query: 76 PNILRLYGYFYDQKRVYLILEYAAKGELYK-----ELQKCKYFSERRAATYVASLARALI 130
P+++ L G+ ++ + LI +Y G L + +L E+R + + AR L
Sbjct: 95 PHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA-ARGLH 153
Query: 131 YCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT-----MCGTLDYLPPEMV 185
Y H + +IHRD+K N+L+ KI DFG S +T + GTL Y+ PE
Sbjct: 154 YLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYF 213
Query: 186 ESVEHDANVDIWSLGVLCYEFL 207
D++S GV+ +E L
Sbjct: 214 IKGRLTEKSDVYSFGVVLFEVL 235
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 13/221 (5%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAR-EKRSNHIVALKVLFKSQLQQSQVEHQLRREV 67
++K TL D K LG G FG V + + + K++ ++ +L E
Sbjct: 4 DRKLLTLED----KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 59
Query: 68 EIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
+ L +P I+R+ G + + L++E A G L K LQ+ ++ ++ V ++
Sbjct: 60 NVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM 118
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCG-TLDYLP 181
+ Y + +HRD+ N+L+ Q KI+DFG S + + +T + +
Sbjct: 119 GMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 178
Query: 182 PEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDT 221
PE + + + D+WS GVL +E F YG P+ + S+
Sbjct: 179 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 219
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 41/231 (17%)
Query: 11 KRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
KR+ + DF + +G G FG V+ A+ + ++ + + + E REV+
Sbjct: 8 KRFGM-DFKEIELIGSGGFGQVFKAKHRIDGKTYVIR---RVKYNNEKAE----REVKAL 59
Query: 71 SHLRHPNILRLYG----YFYD-------------------------QKRVYLILEYAAKG 101
+ L H NI+ G + YD K +++ +E+ KG
Sbjct: 60 AKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKG 119
Query: 102 ELYK--ELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIAD 159
L + E ++ + + A + + + Y H K +IHRD+KP N+ + ++KI D
Sbjct: 120 TLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGD 179
Query: 160 FGW--SVHTFNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLY 208
FG S+ +R GTL Y+ PE + S ++ VD+++LG++ E L+
Sbjct: 180 FGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH 230
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 38/275 (13%)
Query: 3 SEVSAKEKKRWTLNDFDIGKPLGRGKFGHVYLARE---KRSNHIVALKVLFKSQLQQSQV 59
+++ EK + N+ GK LG G FG V A + + ++ + V +
Sbjct: 18 TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE 77
Query: 60 EHQLRREVEIQSHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK--------- 109
+ L E++I SHL +H NI+ L G V +I EY G+L L++
Sbjct: 78 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPS 137
Query: 110 --------------CKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGEL 155
+ R + + +A+ + + K+ IHRD+ N+L+
Sbjct: 138 LAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA 197
Query: 156 KIADFGWSVHTFNRRRTMCGTLDYLP-----PEMVESVEHDANVDIWSLGVLCYE-FLYG 209
KI DFG + N + LP PE + + D+WS G+L +E F G
Sbjct: 198 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 257
Query: 210 VPPFEAKEHSDTYRRIVQ-----VDLKFPPKPIVS 239
+ P+ + + ++V+ F PK I S
Sbjct: 258 LNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYS 292
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 20/209 (9%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
+G G FG VY + + LKV+ + Q R EV + RH NIL G
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQ----FQAFRNEVAVLRKTRHVNILLFMG 99
Query: 84 YFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
Y + + ++ ++ LYK L Q+ K F + A+ + Y H K++IHRD
Sbjct: 100 YM-TKDNLAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLHAKNIIHRD 157
Query: 142 IKPENLLIGAQGELKIADFG-------WSVHTFNRRRTMCGTLDYLPPEMVESVEHDA-- 192
+K N+ + +KI DFG WS + T G++ ++ PE++ +++
Sbjct: 158 MKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT--GSVLWMAPEVIRMQDNNPFS 215
Query: 193 -NVDIWSLGVLCYEFLYGVPPFEAKEHSD 220
D++S G++ YE + G P+ + D
Sbjct: 216 FQSDVYSYGIVLYELMTGELPYSHINNRD 244
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 13/221 (5%)
Query: 9 EKKRWTLNDFDIGKPLGRGKFGHVYLAR-EKRSNHIVALKVLFKSQLQQSQVEHQLRREV 67
++K TL D K LG G FG V + + + K++ ++ +L E
Sbjct: 367 DRKLLTLED----KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 422
Query: 68 EIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLAR 127
+ L +P I+R+ G + + L++E A G L K LQ+ ++ ++ V ++
Sbjct: 423 NVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM 481
Query: 128 ALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNRRRTMCG-TLDYLP 181
+ Y + +HRD+ N+L+ Q KI+DFG S + + +T + +
Sbjct: 482 GMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 541
Query: 182 PEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDT 221
PE + + + D+WS GVL +E F YG P+ + S+
Sbjct: 542 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 582
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 4 EVSAKEKKRWTLNDFDIGKP-------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ 56
EV + KR++L + + LGRG FG VY R +VA+K L + + Q
Sbjct: 11 EVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLA-DGXLVAVKRLKEERTQG 69
Query: 57 SQVEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSE- 115
++ Q + EVE+ S H N+LRL G+ L+ Y A G + L++
Sbjct: 70 GEL--QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP 127
Query: 116 ----RRAATYVASLARALIYCHG---KHVIHRDIKPENLLIGAQGELKIADFGWS----V 164
+R + S AR L Y H +IHRD+K N+L+ + E + DFG +
Sbjct: 128 LDWPKRQRIALGS-ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 186
Query: 165 HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFE 214
+ + G + ++ PE + + + D++ GV+ E + G F+
Sbjct: 187 KDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 103/241 (42%), Gaps = 14/241 (5%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG+G FG V++ + VA+K L + +E ++ LRH +++LY
Sbjct: 16 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 70
Query: 84 YFYDQKRVYLILEYAAKGELYKEL--QKCKYFSERRAATYVASLARALIYCHGKHVIHRD 141
++ + ++ EY +KG L L + KY + A +A + Y + +HRD
Sbjct: 71 VVSEEP-IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 129
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+G K+ADFG + + R+ + + PE D+W
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 189
Query: 198 SLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQ 256
S G+L E G P+ + + + V+ + P P + DL+ Q K+ +
Sbjct: 190 SFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKEPEE 248
Query: 257 R 257
R
Sbjct: 249 R 249
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
N+FD +G G FG VY R VALK + + SQ + E+E S RH
Sbjct: 39 NNFDHKFLIGHGVFGKVYKGV-LRDGAKVALK---RRTPESSQGIEEFETEIETLSFCRH 94
Query: 76 PNILRLYGYFYDQKRVYLILEYAAKGELYK-----ELQKCKYFSERRAATYVASLARALI 130
P+++ L G+ ++ + LI +Y G L + +L E+R + + AR L
Sbjct: 95 PHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA-ARGLH 153
Query: 131 YCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRT-----MCGTLDYLPPEMV 185
Y H + +IHRD+K N+L+ KI DFG S +T + GTL Y+ PE
Sbjct: 154 YLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYF 213
Query: 186 ESVEHDANVDIWSLGVLCYEFL 207
D++S GV+ +E L
Sbjct: 214 IKGRLTEKSDVYSFGVVLFEVL 235
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 4/192 (2%)
Query: 32 VYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYGYFYDQKRV 91
VY A + IVALK+ ++ + +RE L+ P+++ ++ + ++
Sbjct: 50 VYEAEDTVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQL 109
Query: 92 YLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGA 151
Y+ +L L++ + RA V + AL H HRD+KPEN+L+ A
Sbjct: 110 YVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSA 169
Query: 152 QGELKIADFGWSVHTFNRRRT----MCGTLDYLPPEMVESVEHDANVDIWSLGVLCYEFL 207
+ DFG + T + + T GTL Y PE DI++L + YE L
Sbjct: 170 DDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECL 229
Query: 208 YGVPPFEAKEHS 219
G PP++ + S
Sbjct: 230 TGSPPYQGDQLS 241
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 104/251 (41%), Gaps = 16/251 (6%)
Query: 20 IGKPLGRGKFGHV---YLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
I + +G G+FG V +L + VA+K L KS + Q E I HP
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTL-KSGYTEKQ-RRDFLSEASIMGQFDHP 68
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKEL-QKCKYFSERRAATYVASLARALIYCHGK 135
N++ L G V +I E+ G L L Q F+ + + +A + Y
Sbjct: 69 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM 128
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWS--VHTFNRRRTMCGTLD------YLPPEMVES 187
+ +HR + N+L+ + K++DFG S + T L + PE ++
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 188
Query: 188 VEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLI 246
+ + D+WS G++ +E + YG P+ + D I Q D + PP SA L+
Sbjct: 189 RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ-DYRLPPPMDCPSALHQLM 247
Query: 247 SQMLVKDSSQR 257
KD + R
Sbjct: 248 LDCWQKDRNHR 258
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 39/218 (17%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVE-HQLRREVEIQSHLRHPNILRLY 82
+GRG +G+VYLA +K + VA+K + +++ + ++ ++ RE+ I + L+ I+RLY
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKV--NRMFEDLIDCKRILREITILNRLKSDYIIRLY 91
Query: 83 GYF-------YDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGK 135
+D+ +Y++LE A +L K + + +E T + +L + H
Sbjct: 92 DLIIPDDLLKFDE--LYIVLE-IADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES 148
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWS----------------------VHTFNRRRTM 173
+IHRD+KP N L+ +K+ DFG + H N ++ +
Sbjct: 149 GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQL 208
Query: 174 CG---TLDYLPPEMVESVE-HDANVDIWSLGVLCYEFL 207
T Y PE++ E + ++DIWS G + E L
Sbjct: 209 TSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Query: 6 SAKEKKRWTLNDFDIGKP-------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ 58
+ K +K W +++++ + LG G+FG V++ + H KV KS Q S
Sbjct: 6 TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGY--YNGHT---KVAVKSLKQGSM 60
Query: 59 VEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK--YFSER 116
E + L+H ++RLY Q+ +Y+I EY G L L+ +
Sbjct: 61 SPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 119
Query: 117 RAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSV----HTFNRRRT 172
+ A +A + + ++ IHRD++ N+L+ KIADFG + + + R
Sbjct: 120 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 179
Query: 173 MCGTLDYLPPEMVESVEHDANVDIWSLGVLCYEFL 207
+ + PE + D+WS G+L E +
Sbjct: 180 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 214
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Query: 6 SAKEKKRWTLNDFDIGKP-------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ 58
+ K +K W +++++ + LG G+FG V++ + H KV KS Q S
Sbjct: 1 TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGY--YNGHT---KVAVKSLKQGSM 55
Query: 59 VEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK--YFSER 116
E + L+H ++RLY Q+ +Y+I EY G L L+ +
Sbjct: 56 SPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 114
Query: 117 RAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSV----HTFNRRRT 172
+ A +A + + ++ IHRD++ N+L+ KIADFG + + + R
Sbjct: 115 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 174
Query: 173 MCGTLDYLPPEMVESVEHDANVDIWSLGVLCYEFL 207
+ + PE + D+WS G+L E +
Sbjct: 175 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 209
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Query: 6 SAKEKKRWTLNDFDIGKP-------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ 58
+ K +K W +++++ + LG G+FG V++ + H KV KS Q S
Sbjct: 2 TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGY--YNGHT---KVAVKSLKQGSM 56
Query: 59 VEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK--YFSER 116
E + L+H ++RLY Q+ +Y+I EY G L L+ +
Sbjct: 57 SPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 115
Query: 117 RAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSV----HTFNRRRT 172
+ A +A + + ++ IHRD++ N+L+ KIADFG + + + R
Sbjct: 116 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 175
Query: 173 MCGTLDYLPPEMVESVEHDANVDIWSLGVLCYEFL 207
+ + PE + D+WS G+L E +
Sbjct: 176 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 210
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 128/301 (42%), Gaps = 59/301 (19%)
Query: 9 EKKRWTL--NDFDIGKPLGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEHQ 62
E +W + +GK LG G+FG V A + R+ + + K S++
Sbjct: 14 EDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL-RD 72
Query: 63 LRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFS-------- 114
L E + + HP++++LYG + LI+EYA G L L++ +
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 115 ----------ERRAAT------YVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIA 158
+ RA T + +++ + Y ++HRD+ N+L+ ++KI+
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKIS 192
Query: 159 DFGWSVHTFNRRRTMCGTLDYLPPE--MVESV---EHDANVDIWSLGVLCYEFLY----- 208
DFG S + + + +P + +ES+ + D+WS GVL +E +
Sbjct: 193 DFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
Query: 209 --GVPP------------FEAKEH--SDTYRRIVQVDLKFPPK-PIVSSAAKDLISQMLV 251
G+PP E ++ + YR ++Q + P K P+ + +KDL +M+V
Sbjct: 253 YPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL-EKMMV 311
Query: 252 K 252
K
Sbjct: 312 K 312
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 128/301 (42%), Gaps = 59/301 (19%)
Query: 9 EKKRWTL--NDFDIGKPLGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEHQ 62
E +W + +GK LG G+FG V A + R+ + + K S++
Sbjct: 14 EDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL-RD 72
Query: 63 LRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFS-------- 114
L E + + HP++++LYG + LI+EYA G L L++ +
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 115 ----------ERRAAT------YVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIA 158
+ RA T + +++ + Y ++HRD+ N+L+ ++KI+
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKIS 192
Query: 159 DFGWSVHTFNRRRTMCGTLDYLPPE--MVESV---EHDANVDIWSLGVLCYEFLY----- 208
DFG S + + + +P + +ES+ + D+WS GVL +E +
Sbjct: 193 DFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
Query: 209 --GVPP------------FEAKEH--SDTYRRIVQVDLKFPPK-PIVSSAAKDLISQMLV 251
G+PP E ++ + YR ++Q + P K P+ + +KDL +M+V
Sbjct: 253 YPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL-EKMMV 311
Query: 252 K 252
K
Sbjct: 312 K 312
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 119/276 (43%), Gaps = 31/276 (11%)
Query: 18 FDIGKPLGRGKFGHVYLAR-----EKRSNHIVALKVLFKSQLQQSQVEHQ-LRREVEIQS 71
++GKPLGRG FG V A + + VA+K+L + + EH+ L E++I
Sbjct: 29 LNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGA---THSEHRALMSELKILI 85
Query: 72 HL-RHPNILRLYGYFYDQKR-VYLILEYAAKGEL-------------YKELQKCKYFSER 116
H+ H N++ L G + +I+E+ G L YK+L K + +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYK-DFLTLE 144
Query: 117 RAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFN-----RRR 171
Y +A+ + + + IHRD+ N+L+ + +KI DFG + + R+
Sbjct: 145 HLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKG 204
Query: 172 TMCGTLDYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDL 230
L ++ PE + + D+WS GVL +E F G P+ + + + R ++
Sbjct: 205 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGT 264
Query: 231 KFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEH 266
+ + + + SQR +L+EH
Sbjct: 265 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 119/276 (43%), Gaps = 31/276 (11%)
Query: 18 FDIGKPLGRGKFGHVYLAR-----EKRSNHIVALKVLFKSQLQQSQVEHQ-LRREVEIQS 71
++GKPLGRG FG V A + + VA+K+L + + EH+ L E++I
Sbjct: 29 LNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGA---THSEHRALMSELKILI 85
Query: 72 HL-RHPNILRLYGYFYDQKR-VYLILEYAAKGEL-------------YKELQKCKYFSER 116
H+ H N++ L G + +I+E+ G L YK+L K + +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYK-DFLTLE 144
Query: 117 RAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFN-----RRR 171
Y +A+ + + + IHRD+ N+L+ + +KI DFG + + R+
Sbjct: 145 HLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 204
Query: 172 TMCGTLDYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDL 230
L ++ PE + + D+WS GVL +E F G P+ + + + R ++
Sbjct: 205 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 264
Query: 231 KFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEH 266
+ + + + SQR +L+EH
Sbjct: 265 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 108/266 (40%), Gaps = 21/266 (7%)
Query: 20 IGKPLGRGKFGHVYLAREK---RSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
I K +G G+FG V R K + VA+K L K+ Q E I HP
Sbjct: 33 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQ-RRDFLSEASIMGQFDHP 90
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHGK 135
NI+ L G K V +I EY G L L+K F+ + + + + Y
Sbjct: 91 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 150
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT------LDYLPPEMVESVE 189
+HRD+ N+L+ + K++DFG S + T + + PE + +
Sbjct: 151 SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 210
Query: 190 HDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
+ D+WS G++ +E + YG P+ + D + I + + PP A L+
Sbjct: 211 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI-EEGYRLPPPMDCPIALHQLMLD 269
Query: 249 MLVKDSSQRLP-------LHKLLEHP 267
K+ S R L KL+ +P
Sbjct: 270 CWQKERSDRPKFGQIVNMLDKLIRNP 295
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 12/190 (6%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG G+FG V++ + H KV KS Q S E + L+H ++RLY
Sbjct: 21 LGAGQFGEVWMGY--YNGHT---KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCK--YFSERRAATYVASLARALIYCHGKHVIHRD 141
Q+ +Y+I EY G L L+ + + A +A + + ++ IHRD
Sbjct: 76 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+ KIADFG + + + R + + PE + D+W
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 198 SLGVLCYEFL 207
S G+L E +
Sbjct: 195 SFGILLTEIV 204
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 12/190 (6%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG G+FG V++ + H KV KS Q S E + L+H ++RLY
Sbjct: 16 LGAGQFGEVWMGY--YNGHT---KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 70
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCK--YFSERRAATYVASLARALIYCHGKHVIHRD 141
Q+ +Y+I EY G L L+ + + A +A + + ++ IHRD
Sbjct: 71 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 129
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+ KIADFG + + + R + + PE + D+W
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 189
Query: 198 SLGVLCYEFL 207
S G+L E +
Sbjct: 190 SFGILLTEIV 199
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 29/242 (11%)
Query: 11 KRWTLNDFDIGKPLGRGKFGHVYLAR-----EKRSNHIVALKVLFKSQLQQSQVEHQLRR 65
K +L+ + LG +FG VY VA+K L + + + R
Sbjct: 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL--KDKAEGPLREEFRH 78
Query: 66 EVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT----- 120
E +++ L+HPN++ L G + + +I Y + G+L++ L S+ +
Sbjct: 79 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 138
Query: 121 -----------YVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGW--SVHTF 167
VA +A + Y HV+H+D+ N+L+ + +KI+D G V+
Sbjct: 139 KSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 198
Query: 168 NRRRTMCGTL---DYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYR 223
+ + + +L ++ PE + + + DIWS GV+ +E F YG+ P+ + D
Sbjct: 199 DYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE 258
Query: 224 RI 225
I
Sbjct: 259 MI 260
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 24 LGRGKFGHVYLAR-----EKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNI 78
LG +FG VY VA+K L + + + R E +++ L+HPN+
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL--KDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 79 LRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAAT----------------YV 122
+ L G + + +I Y + G+L++ L S+ + V
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 123 ASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGW--SVHTFNRRRTMCGTL--- 177
A +A + Y HV+H+D+ N+L+ + +KI+D G V+ + + + +L
Sbjct: 135 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI 194
Query: 178 DYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRI 225
++ PE + + + DIWS GV+ +E F YG+ P+ + D I
Sbjct: 195 RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI 243
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 18/225 (8%)
Query: 24 LGRGKFGHV----YLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
LG G FG V Y R+K+ + VA+KVL K +++ E ++ RE +I L +P I+
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQID--VAIKVL-KQGTEKADTE-EMMREAQIMHQLDNPYIV 73
Query: 80 RLYGYFYDQKRVYLILEYAAKGELYKEL-QKCKYFSERRAATYVASLARALIYCHGKHVI 138
RL G + + L++E A G L+K L K + A + ++ + Y K+ +
Sbjct: 74 RLIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFV 132
Query: 139 HRDIKPENLLIGAQGELKIADFGWSVHT------FNRRRTMCGTLDYLPPEMVESVEHDA 192
HRD+ N+L+ + KI+DFG S + R L + PE + + +
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 192
Query: 193 NVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVD-LKFPPK 235
D+WS GV +E L YG P++ + + I Q ++ PP+
Sbjct: 193 RSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPE 237
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 108/266 (40%), Gaps = 21/266 (7%)
Query: 20 IGKPLGRGKFGHVYLAREK---RSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
I K +G G+FG V R K + VA+K L K+ Q E I HP
Sbjct: 18 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQ-RRDFLSEASIMGQFDHP 75
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHGK 135
NI+ L G K V +I EY G L L+K F+ + + + + Y
Sbjct: 76 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 135
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT------LDYLPPEMVESVE 189
+HRD+ N+L+ + K++DFG S + T + + PE + +
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 195
Query: 190 HDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
+ D+WS G++ +E + YG P+ + D + I + + PP A L+
Sbjct: 196 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI-EEGYRLPPPMDCPIALHQLMLD 254
Query: 249 MLVKDSSQRLP-------LHKLLEHP 267
K+ S R L KL+ +P
Sbjct: 255 CWQKERSDRPKFGQIVNMLDKLIRNP 280
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 128/301 (42%), Gaps = 59/301 (19%)
Query: 9 EKKRWTL--NDFDIGKPLGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEHQ 62
E +W + +GK LG G+FG V A + R+ + + K S++
Sbjct: 14 EDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL-RD 72
Query: 63 LRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFS-------- 114
L E + + HP++++LYG + LI+EYA G L L++ +
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 115 ----------ERRAAT------YVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIA 158
+ RA T + +++ + Y ++HRD+ N+L+ ++KI+
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKIS 192
Query: 159 DFGWSVHTFNRRRTMCGTLDYLPPE--MVESV---EHDANVDIWSLGVLCYEFLY----- 208
DFG S + + + +P + +ES+ + D+WS GVL +E +
Sbjct: 193 DFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
Query: 209 --GVPP------------FEAKEH--SDTYRRIVQVDLKFPPK-PIVSSAAKDLISQMLV 251
G+PP E ++ + YR ++Q + P K P+ + +KDL +M+V
Sbjct: 253 YPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL-EKMMV 311
Query: 252 K 252
K
Sbjct: 312 K 312
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 20/199 (10%)
Query: 24 LGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEHQ--LRREVEIQSHLRHPN 77
LG+G FG V L R + +VA+K QLQ S + Q +RE++I L
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVK-----QLQHSGPDQQRDFQREIQILKALHSDF 72
Query: 78 ILRLYGYFYDQKR--VYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARALIYCHG 134
I++ G Y R + L++EY G L LQ+ + R Y + + + + Y
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 132
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVESV 188
+ +HRD+ N+L+ ++ +KIADFG + + R + + PE +
Sbjct: 133 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 192
Query: 189 EHDANVDIWSLGVLCYEFL 207
D+WS GV+ YE
Sbjct: 193 IFSRQSDVWSFGVVLYELF 211
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 108/266 (40%), Gaps = 21/266 (7%)
Query: 20 IGKPLGRGKFGHVYLAREK---RSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
I K +G G+FG V R K + VA+K L K+ Q E I HP
Sbjct: 12 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQ-RRDFLSEASIMGQFDHP 69
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHGK 135
NI+ L G K V +I EY G L L+K F+ + + + + Y
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 129
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT------LDYLPPEMVESVE 189
+HRD+ N+L+ + K++DFG S + T + + PE + +
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 189
Query: 190 HDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
+ D+WS G++ +E + YG P+ + D + I + + PP A L+
Sbjct: 190 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI-EEGYRLPPPMDCPIALHQLMLD 248
Query: 249 MLVKDSSQRLP-------LHKLLEHP 267
K+ S R L KL+ +P
Sbjct: 249 CWQKERSDRPKFGQIVNMLDKLIRNP 274
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 20/199 (10%)
Query: 24 LGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEHQ--LRREVEIQSHLRHPN 77
LG+G FG V L R + +VA+K QLQ S + Q +RE++I L
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVK-----QLQHSGPDQQRDFQREIQILKALHSDF 73
Query: 78 ILRLYGYFYDQKR--VYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARALIYCHG 134
I++ G Y R + L++EY G L LQ+ + R Y + + + + Y
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 133
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVESV 188
+ +HRD+ N+L+ ++ +KIADFG + + R + + PE +
Sbjct: 134 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 193
Query: 189 EHDANVDIWSLGVLCYEFL 207
D+WS GV+ YE
Sbjct: 194 IFSRQSDVWSFGVVLYELF 212
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 24 LGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEHQ--LRREVEIQSHLRHPN 77
LG+G FG V L R + +VA+K QLQ S + Q +RE++I L
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVK-----QLQHSGPDQQRDFQREIQILKALHSDF 69
Query: 78 ILRLYGYFYDQKR--VYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARALIYCHG 134
I++ G Y R + L++EY G L LQ+ + R Y + + + + Y
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 129
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS-VHTFNR-----RRTMCGTLDYLPPEMVESV 188
+ +HRD+ N+L+ ++ +KIADFG + + ++ R + + PE +
Sbjct: 130 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDN 189
Query: 189 EHDANVDIWSLGVLCYEFL 207
D+WS GV+ YE
Sbjct: 190 IFSRQSDVWSFGVVLYELF 208
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 19/215 (8%)
Query: 6 SAKEKKRWTLNDFDIGKP-------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ 58
+ K +K W +++++ + LG G+FG V++ + H KV KS Q S
Sbjct: 2 TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGY--YNGHT---KVAVKSLKQGSM 56
Query: 59 VEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK--YFSER 116
E + L+H ++RLY Q+ +Y+I EY G L L+ +
Sbjct: 57 SPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 115
Query: 117 RAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSV----HTFNRRRT 172
+ A +A + + ++ IHRD++ N+L+ KIADFG + + R
Sbjct: 116 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 175
Query: 173 MCGTLDYLPPEMVESVEHDANVDIWSLGVLCYEFL 207
+ + PE + D+WS G+L E +
Sbjct: 176 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 210
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 20/199 (10%)
Query: 24 LGRGKFGHVYLAR----EKRSNHIVALKVLFKSQLQQSQVEHQ--LRREVEIQSHLRHPN 77
LG+G FG V L R + +VA+K QLQ S + Q +RE++I L
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVK-----QLQHSGPDQQRDFQREIQILKALHSDF 85
Query: 78 ILRLYGYFYDQKR--VYLILEYAAKGELYKELQKCKY-FSERRAATYVASLARALIYCHG 134
I++ G Y R + L++EY G L LQ+ + R Y + + + + Y
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 145
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWS------VHTFNRRRTMCGTLDYLPPEMVESV 188
+ +HRD+ N+L+ ++ +KIADFG + + R + + PE +
Sbjct: 146 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 205
Query: 189 EHDANVDIWSLGVLCYEFL 207
D+WS GV+ YE
Sbjct: 206 IFSRQSDVWSFGVVLYELF 224
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 19/215 (8%)
Query: 6 SAKEKKRWTLNDFDIGKP-------LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQ 58
+ K +K W +++++ + LG G+FG V++ + H KV KS Q S
Sbjct: 4 TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGY--YNGHT---KVAVKSLKQGSM 58
Query: 59 VEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK--YFSER 116
E + L+H ++RLY Q+ +Y+I EY G L L+ +
Sbjct: 59 SPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 117
Query: 117 RAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSV----HTFNRRRT 172
+ A +A + + ++ IHRD++ N+L+ KIADFG + + R
Sbjct: 118 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 177
Query: 173 MCGTLDYLPPEMVESVEHDANVDIWSLGVLCYEFL 207
+ + PE + D+WS G+L E +
Sbjct: 178 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 212
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 12/190 (6%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG G+FG V++ + H KV KS Q S E + L+H ++RLY
Sbjct: 30 LGAGQFGEVWMGY--YNGHT---KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 84
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCK--YFSERRAATYVASLARALIYCHGKHVIHRD 141
Q+ +Y+I EY G L L+ + + A +A + + ++ IHRD
Sbjct: 85 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 143
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+ KIADFG + + R + + PE + D+W
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 203
Query: 198 SLGVLCYEFL 207
S G+L E +
Sbjct: 204 SFGILLTEIV 213
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 127/296 (42%), Gaps = 50/296 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+ + + LGRGK+ V+ A +N + + L+ + + R +++
Sbjct: 38 DDYQLVRKLGRGKYSEVFEAINITNN-----ERVVVKILKPVKKKKIKREVKILENLRGG 92
Query: 76 PNILRLYGYFYD--QKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
NI++L D K L+ EY + + Q F R Y+ L +AL YCH
Sbjct: 93 TNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIR---FYMYELLKALDYCH 149
Query: 134 GKHVIHRDIKPENLLIG-AQGELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
K ++HRD+KP N++I Q +L++ D+G + H + + PE +V+
Sbjct: 150 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQM 209
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPP- 234
+D ++D+WSLG + ++ P F +++ D RI +V + P
Sbjct: 210 YDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPH 269
Query: 235 ---------------------KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ +VS A DL+ ++L D QRL + +EHP+
Sbjct: 270 FNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 12/190 (6%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG G+FG V++ + H KV KS Q S E + L+H ++RLY
Sbjct: 21 LGAGQFGEVWMGY--YNGHT---KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCK--YFSERRAATYVASLARALIYCHGKHVIHRD 141
Q+ +Y+I EY G L L+ + + A +A + + ++ IHRD
Sbjct: 76 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+ KIADFG + + R + + PE + D+W
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 198 SLGVLCYEFL 207
S G+L E +
Sbjct: 195 SFGILLTEIV 204
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 12/190 (6%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG G+FG V++ + H KV KS Q S E + L+H ++RLY
Sbjct: 23 LGAGQFGEVWMGY--YNGHT---KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 77
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCK--YFSERRAATYVASLARALIYCHGKHVIHRD 141
Q+ +Y+I EY G L L+ + + A +A + + ++ IHRD
Sbjct: 78 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 136
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+ KIADFG + + R + + PE + D+W
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 196
Query: 198 SLGVLCYEFL 207
S G+L E +
Sbjct: 197 SFGILLTEIV 206
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 12/190 (6%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG G+FG V++ + H KV KS Q S E + L+H ++RLY
Sbjct: 21 LGAGQFGEVWMGY--YNGHT---KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCK--YFSERRAATYVASLARALIYCHGKHVIHRD 141
Q+ +Y+I EY G L L+ + + A +A + + ++ IHRD
Sbjct: 76 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+ KIADFG + + R + + PE + D+W
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 198 SLGVLCYEFL 207
S G+L E +
Sbjct: 195 SFGILLTEIV 204
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 12/190 (6%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG G+FG V++ + H KV KS Q S E + L+H ++RLY
Sbjct: 22 LGAGQFGEVWMGY--YNGHT---KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 76
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCK--YFSERRAATYVASLARALIYCHGKHVIHRD 141
Q+ +Y+I EY G L L+ + + A +A + + ++ IHRD
Sbjct: 77 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 135
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+ KIADFG + + R + + PE + D+W
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 195
Query: 198 SLGVLCYEFL 207
S G+L E +
Sbjct: 196 SFGILLTEIV 205
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 127/296 (42%), Gaps = 50/296 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+ + + LGRGK+ V+ A +N + + L+ + + R +++
Sbjct: 43 DDYQLVRKLGRGKYSEVFEAINITNN-----ERVVVKILKPVKKKKIKREVKILENLRGG 97
Query: 76 PNILRLYGYFYD--QKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
NI++L D K L+ EY + + Q F R Y+ L +AL YCH
Sbjct: 98 TNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIR---FYMYELLKALDYCH 154
Query: 134 GKHVIHRDIKPENLLIG-AQGELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
K ++HRD+KP N++I Q +L++ D+G + H + + PE +V+
Sbjct: 155 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQM 214
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPP- 234
+D ++D+WSLG + ++ P F +++ D RI +V + P
Sbjct: 215 YDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPH 274
Query: 235 ---------------------KPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+ +VS A DL+ ++L D QRL + +EHP+
Sbjct: 275 FNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 12/190 (6%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG G+FG V++ + H KV KS Q S E + L+H ++RLY
Sbjct: 17 LGAGQFGEVWMGY--YNGHT---KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 71
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCK--YFSERRAATYVASLARALIYCHGKHVIHRD 141
Q+ +Y+I EY G L L+ + + A +A + + ++ IHR+
Sbjct: 72 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRN 130
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+ KIADFG + + + R + + PE + D+W
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 190
Query: 198 SLGVLCYEFL 207
S G+L E +
Sbjct: 191 SFGILLTEIV 200
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 92/230 (40%), Gaps = 16/230 (6%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNH---IVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
D + + LG G FG V + VA+K L L Q + REV L
Sbjct: 13 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 72
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYC 132
H N++RLYG + ++ E A G L L+K + +F + Y +A + Y
Sbjct: 73 DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 131
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGW--------SVHTFNRRRTMCGTLDYLPPEM 184
K IHRD+ NLL+ + +KI DFG + R + + PE
Sbjct: 132 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWCAPES 189
Query: 185 VESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
+++ D W GV +E F YG P+ S +I + + P
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 39/232 (16%)
Query: 13 WTLND-FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQS 71
W + D ++I +G G +GHV A +K +VA+K + + + LR E+ I +
Sbjct: 49 WQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR-EIAILN 107
Query: 72 HLRHPNILRLYGYFYDQK-----RVYLILEYAAKGELYKELQKCKYFSERRAATYVASLA 126
L H +++++ + +Y++LE A + K + Y +E T + +L
Sbjct: 108 RLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLL 166
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS----------------------- 163
+ Y H ++HRD+KP N L+ +K+ DFG +
Sbjct: 167 VGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMN 226
Query: 164 ----VHTFNRRRTMCG---TLDYLPPEMVESVE-HDANVDIWSLGVLCYEFL 207
HT N +R + G T Y PE++ E + +D+WS+G + E L
Sbjct: 227 LVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 92/230 (40%), Gaps = 16/230 (6%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNH---IVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
D + + LG G FG V + VA+K L L Q + REV L
Sbjct: 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 78
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYC 132
H N++RLYG + ++ E A G L L+K + +F + Y +A + Y
Sbjct: 79 DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 137
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGW--------SVHTFNRRRTMCGTLDYLPPEM 184
K IHRD+ NLL+ + +KI DFG + R + + PE
Sbjct: 138 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWCAPES 195
Query: 185 VESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
+++ D W GV +E F YG P+ S +I + + P
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 92/230 (40%), Gaps = 16/230 (6%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNH---IVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
D + + LG G FG V + VA+K L L Q + REV L
Sbjct: 13 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 72
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYC 132
H N++RLYG + ++ E A G L L+K + +F + Y +A + Y
Sbjct: 73 DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 131
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGW--------SVHTFNRRRTMCGTLDYLPPEM 184
K IHRD+ NLL+ + +KI DFG + R + + PE
Sbjct: 132 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWCAPES 189
Query: 185 VESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
+++ D W GV +E F YG P+ S +I + + P
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 92/230 (40%), Gaps = 16/230 (6%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNH---IVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
D + + LG G FG V + VA+K L L Q + REV L
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYC 132
H N++RLYG + ++ E A G L L+K + +F + Y +A + Y
Sbjct: 69 DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGW--------SVHTFNRRRTMCGTLDYLPPEM 184
K IHRD+ NLL+ + +KI DFG + R + + PE
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWCAPES 185
Query: 185 VESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
+++ D W GV +E F YG P+ S +I + + P
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 18/225 (8%)
Query: 24 LGRGKFGHV----YLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
LG G FG V Y R+K+ + VA+KVL K +++ E ++ RE +I L +P I+
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQID--VAIKVL-KQGTEKADTE-EMMREAQIMHQLDNPYIV 399
Query: 80 RLYGYFYDQKRVYLILEYAAKGELYKEL-QKCKYFSERRAATYVASLARALIYCHGKHVI 138
RL G + + L++E A G L+K L K + A + ++ + Y K+ +
Sbjct: 400 RLIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFV 458
Query: 139 HRDIKPENLLIGAQGELKIADFGWSVHT------FNRRRTMCGTLDYLPPEMVESVEHDA 192
HR++ N+L+ + KI+DFG S + R L + PE + + +
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 518
Query: 193 NVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVD-LKFPPK 235
D+WS GV +E L YG P++ + + I Q ++ PP+
Sbjct: 519 RSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPE 563
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 20/196 (10%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRL 81
K LG G+FG V++ N VA+K L + E +I L+H +++L
Sbjct: 15 KRLGNGQFGEVWMGT-WNGNTKVAIKTLKPGTMSP----ESFLEEAQIMKKLKHDKLVQL 69
Query: 82 YGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRA------ATYVASLARALIYCHGK 135
Y ++ +Y++ EY KG L L+ E RA A +A + Y
Sbjct: 70 YAVVSEEP-IYIVTEYMNKGSLLDFLKD----GEGRALKLPNLVDMAAQVAAGMAYIERM 124
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHD 191
+ IHRD++ N+L+G KIADFG + + R+ + + PE
Sbjct: 125 NYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFT 184
Query: 192 ANVDIWSLGVLCYEFL 207
D+WS G+L E +
Sbjct: 185 IKSDVWSFGILLTELV 200
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 92/230 (40%), Gaps = 16/230 (6%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNH---IVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
D + + LG G FG V + VA+K L L Q + REV L
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYC 132
H N++RLYG + ++ E A G L L+K + +F + Y +A + Y
Sbjct: 69 DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGW--------SVHTFNRRRTMCGTLDYLPPEM 184
K IHRD+ NLL+ + +KI DFG + R + + PE
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWCAPES 185
Query: 185 VESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
+++ D W GV +E F YG P+ S +I + + P
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 128/296 (43%), Gaps = 58/296 (19%)
Query: 11 KRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
+R D + + +G+G++G V+ + N VA+K+ S+ E RE E+
Sbjct: 3 QRTVARDITLLECVGKGRYGEVWRGSWQGEN--VAVKIF------SSRDEKSWFRETELY 54
Query: 71 SH--LRHPNILRLYGY----FYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVAS 124
+ LRH NIL + +++LI Y G LY LQ V S
Sbjct: 55 NTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-LTTLDTVSCLRIVLS 113
Query: 125 LARALIYCH-------GKHVI-HRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM--- 173
+A L + H GK I HRD+K +N+L+ G+ IAD G +V +
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG 173
Query: 174 ----CGTLDYLPPEMV-ESVEHDA-----NVDIWSLGVLCYEFL-----YGV-----PPF 213
GT Y+ PE++ E+++ D VDIW+ G++ +E G+ PPF
Sbjct: 174 NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233
Query: 214 EAKEHSD----TYRRIVQVDLKFP-------PKPIVSSAAKDLISQMLVKDSSQRL 258
+D R++V VD + P P ++S AK L+ + ++ S RL
Sbjct: 234 YDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAK-LMKECWYQNPSARL 288
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 106/250 (42%), Gaps = 13/250 (5%)
Query: 17 DFDIGKPLGRGKFGHVY---LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
D + + LG G FG VY K VA+K K ++ + E I +L
Sbjct: 9 DVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNL 66
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYC 132
HP+I++L G +++ ++I+E GEL L++ K Y + +A+ Y
Sbjct: 67 DHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 125
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT----FNRRRTMCGTLDYLPPEMVESV 188
+ +HRDI N+L+ + +K+ DFG S + + + + ++ PE +
Sbjct: 126 ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 185
Query: 189 EHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
D+W V +E L +G PF E+ D + + D + P + L++
Sbjct: 186 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD-RLPKPDLCPPVLYTLMT 244
Query: 248 QMLVKDSSQR 257
+ D S R
Sbjct: 245 RCWDYDPSDR 254
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 93/232 (40%), Gaps = 20/232 (8%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNH---IVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
D + + LG G FG V + VA+K L L Q + REV L
Sbjct: 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 78
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYC 132
H N++RLYG + ++ E A G L L+K + +F + Y +A + Y
Sbjct: 79 DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 137
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGW----------SVHTFNRRRTMCGTLDYLPP 182
K IHRD+ NLL+ + +KI DFG V +R+ + P
Sbjct: 138 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA----WCAP 193
Query: 183 EMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
E +++ D W GV +E F YG P+ S +I + + P
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 93/232 (40%), Gaps = 20/232 (8%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNH---IVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
D + + LG G FG V + VA+K L L Q + REV L
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYC 132
H N++RLYG + ++ E A G L L+K + +F + Y +A + Y
Sbjct: 69 DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGW----------SVHTFNRRRTMCGTLDYLPP 182
K IHRD+ NLL+ + +KI DFG V +R+ + P
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA----WCAP 183
Query: 183 EMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKFP 233
E +++ D W GV +E F YG P+ S +I + + P
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 106/250 (42%), Gaps = 13/250 (5%)
Query: 17 DFDIGKPLGRGKFGHVY---LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
D + + LG G FG VY K VA+K K ++ + E I +L
Sbjct: 13 DVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNL 70
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYC 132
HP+I++L G +++ ++I+E GEL L++ K Y + +A+ Y
Sbjct: 71 DHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 129
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT----FNRRRTMCGTLDYLPPEMVESV 188
+ +HRDI N+L+ + +K+ DFG S + + + + ++ PE +
Sbjct: 130 ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 189
Query: 189 EHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
D+W V +E L +G PF E+ D + + D + P + L++
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD-RLPKPDLCPPVLYTLMT 248
Query: 248 QMLVKDSSQR 257
+ D S R
Sbjct: 249 RCWDYDPSDR 258
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 106/250 (42%), Gaps = 13/250 (5%)
Query: 17 DFDIGKPLGRGKFGHVY---LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHL 73
D + + LG G FG VY K VA+K K ++ + E I +L
Sbjct: 25 DVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNL 82
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYC 132
HP+I++L G +++ ++I+E GEL L++ K Y + +A+ Y
Sbjct: 83 DHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 141
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWSVHT----FNRRRTMCGTLDYLPPEMVESV 188
+ +HRDI N+L+ + +K+ DFG S + + + + ++ PE +
Sbjct: 142 ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 201
Query: 189 EHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLIS 247
D+W V +E L +G PF E+ D + + D + P + L++
Sbjct: 202 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD-RLPKPDLCPPVLYTLMT 260
Query: 248 QMLVKDSSQR 257
+ D S R
Sbjct: 261 RCWDYDPSDR 270
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 123/283 (43%), Gaps = 58/283 (20%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSH--LRHPNILRL 81
+G+G++G V+ + N VA+K+ S+ E RE E+ + LRH NIL
Sbjct: 45 VGKGRYGEVWRGSWQGEN--VAVKIF------SSRDEKSWFRETELYNTVMLRHENILGF 96
Query: 82 YGY----FYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH---- 133
+ +++LI Y G LY LQ V S+A L + H
Sbjct: 97 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-LTTLDTVSCLRIVLSIASGLAHLHIEIF 155
Query: 134 ---GKHVI-HRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM-------CGTLDYLPP 182
GK I HRD+K +N+L+ G+ IAD G +V + GT Y+ P
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 215
Query: 183 EMV-ESVEHDA-----NVDIWSLGVLCYEFL-----YGV-----PPFEAKEHSD----TY 222
E++ E+++ D VDIW+ G++ +E G+ PPF +D
Sbjct: 216 EVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDM 275
Query: 223 RRIVQVDLKFP-------PKPIVSSAAKDLISQMLVKDSSQRL 258
R++V VD + P P ++S AK L+ + ++ S RL
Sbjct: 276 RKVVCVDQQRPNIPNRWFSDPTLTSLAK-LMKECWYQNPSARL 317
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 123/283 (43%), Gaps = 58/283 (20%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSH--LRHPNILRL 81
+G+G++G V+ + N VA+K+ S+ E RE E+ + LRH NIL
Sbjct: 16 VGKGRYGEVWRGSWQGEN--VAVKIF------SSRDEKSWFRETELYNTVMLRHENILGF 67
Query: 82 YGY----FYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH---- 133
+ +++LI Y G LY LQ V S+A L + H
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-LTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 134 ---GKHVI-HRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTM-------CGTLDYLPP 182
GK I HRD+K +N+L+ G+ IAD G +V + GT Y+ P
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 183 EMV-ESVEHDA-----NVDIWSLGVLCYEFL-----YGV-----PPFEAKEHSD----TY 222
E++ E+++ D VDIW+ G++ +E G+ PPF +D
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDM 246
Query: 223 RRIVQVDLKFP-------PKPIVSSAAKDLISQMLVKDSSQRL 258
R++V VD + P P ++S AK L+ + ++ S RL
Sbjct: 247 RKVVCVDQQRPNIPNRWFSDPTLTSLAK-LMKECWYQNPSARL 288
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 118/286 (41%), Gaps = 41/286 (14%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR-HPNILRLY 82
L G F VY A++ S ALK L ++ ++++ + +EV L HPNI++
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRA---IIQEVCFMKKLSGHPNIVQFC 92
Query: 83 GYFYDQKRV-------YLILEYAAKGELYKELQKCKYFSERRAATYVA---SLARALIYC 132
K +L+L KG+L + L+K + T + RA+ +
Sbjct: 93 SAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152
Query: 133 HGKH--VIHRDIKPENLLIGAQGELKIADFG------------WSVH---TFNRRRTMCG 175
H + +IHRD+K ENLL+ QG +K+ DFG WS T
Sbjct: 153 HRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNT 212
Query: 176 TLDYLPPEMVESVEH---DANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKF 232
T Y PE+++ + DIW+LG + Y + PFE RIV
Sbjct: 213 TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE----DGAKLRIVNGKYSI 268
Query: 233 PPKPIVSSAAKDLISQMLVKDSSQRLPLHKL---LEHPWIIQNADP 275
PP + LI ML + +RL + ++ L+ +N +P
Sbjct: 269 PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNP 314
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 114/274 (41%), Gaps = 27/274 (9%)
Query: 20 IGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ--SQVEHQ-LRREVEIQSHL-RH 75
+GKPLGRG FG V A + + + L++ + EH+ L E++I H+ H
Sbjct: 33 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 76 PNILRLYGYFYDQKR-VYLILEYAAKGEL-------------YKELQKCKY---FSERRA 118
N++ L G + +I+E+ G L YKE + Y +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 119 ATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFN-----RRRTM 173
Y +A+ + + + IHRD+ N+L+ + +KI DFG + + R+
Sbjct: 153 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 174 CGTLDYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKF 232
L ++ PE + + D+WS GVL +E F G P+ + + + R ++ +
Sbjct: 213 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 272
Query: 233 PPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEH 266
+ + + SQR +L+EH
Sbjct: 273 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 24/259 (9%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR---HPNILR 80
LG G +G V+ R K + A+K +S + + R+ E+ SH + HP +R
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVK---RSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVR 121
Query: 81 LYGYFYDQKRVYLILEYAAKGELYKELQKCKYFS----ERRAATYVASLARALIYCHGKH 136
L + + +YL E Q C+ + E + Y+ AL + H +
Sbjct: 122 LEQAWEEGGILYLQTELCGP----SLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG 177
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWSVH--TFNRRRTMCGTLDYLPPEMVESVEHDANV 194
++H D+KP N+ +G +G K+ DFG V T G Y+ PE+++ +
Sbjct: 178 LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAA 236
Query: 195 DIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPK--PIVSSAAKDLISQMLVK 252
D++SLG+ E + E + ++++ Q L PP+ +SS + ++ ML
Sbjct: 237 DVFSLGLTILEVACNM---ELPHGGEGWQQLRQGYL--PPEFTAGLSSELRSVLVMMLEP 291
Query: 253 DSSQRLPLHKLLEHPWIIQ 271
D R LL P + Q
Sbjct: 292 DPKLRATAEALLALPVLRQ 310
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 19/220 (8%)
Query: 20 IGKPLGRGKFGHVYLAREK---RSNHIVALKVLFKSQLQQSQVEHQLRR---EVEIQSHL 73
I + +G G+FG V R K + + VA+K L + E Q R E I
Sbjct: 47 IERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTL-----KVGYTEKQRRDFLCEASIMGQF 101
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK-CKYFSERRAATYVASLARALIYC 132
HPN++ L G K V +++E+ G L L+K F+ + + +A + Y
Sbjct: 102 DHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYL 161
Query: 133 HGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT------LDYLPPEMVE 186
+HRD+ N+L+ + K++DFG S + + T + + PE ++
Sbjct: 162 ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQ 221
Query: 187 SVEHDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRI 225
+ + D+WS G++ +E + YG P+ + D + I
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 261
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 13/217 (5%)
Query: 20 IGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRR---EVEIQSHLRHP 76
I + +G G+FG V R K L V K+ L+ E Q R E I HP
Sbjct: 26 IERVIGAGEFGEVCSGRLKLPGK-RELPVAIKT-LKVGYTEKQRRDFLGEASIMGQFDHP 83
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHGK 135
NI+ L G K V ++ EY G L L+K F+ + + ++ + Y
Sbjct: 84 NIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDM 143
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT------LDYLPPEMVESVE 189
+HRD+ N+LI + K++DFG S + T + + PE + +
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRK 203
Query: 190 HDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRI 225
+ D+WS G++ +E + YG P+ + D + +
Sbjct: 204 FTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAV 240
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 17/199 (8%)
Query: 22 KPLGRGKFGHV----YLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
+ LG G FG V Y + +VA+K L + Q+ +RE+EI L H +
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KEGCGPQLRSGWQREIEILRTLYHEH 72
Query: 78 ILRLYGYFYDQ--KRVYLILEYAAKGELYKELQK-CKYFSERRAATYVASLARALIYCHG 134
I++ G DQ K V L++EY G L L + C ++ + + + Y H
Sbjct: 73 IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQ--LLLFAQQICEGMAYLHA 130
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNR-RRTMCGTLDYLPPEMVESV 188
+H IHR + N+L+ +KI DFG + H + R R + + PE ++
Sbjct: 131 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 190
Query: 189 EHDANVDIWSLGVLCYEFL 207
+ D+WS GV YE L
Sbjct: 191 KFYYASDVWSFGVTLYELL 209
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 17/199 (8%)
Query: 22 KPLGRGKFGHV----YLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
+ LG G FG V Y + +VA+K L + Q+ +RE+EI L H +
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KEGCGPQLRSGWQREIEILRTLYHEH 71
Query: 78 ILRLYGYFYDQ--KRVYLILEYAAKGELYKELQK-CKYFSERRAATYVASLARALIYCHG 134
I++ G DQ K V L++EY G L L + C ++ + + + Y H
Sbjct: 72 IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQ--LLLFAQQICEGMAYLHA 129
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGWSV-----HTFNR-RRTMCGTLDYLPPEMVESV 188
+H IHR + N+L+ +KI DFG + H + R R + + PE ++
Sbjct: 130 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 189
Query: 189 EHDANVDIWSLGVLCYEFL 207
+ D+WS GV YE L
Sbjct: 190 KFYYASDVWSFGVTLYELL 208
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 113/274 (41%), Gaps = 27/274 (9%)
Query: 20 IGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ--SQVEHQ-LRREVEIQSHL-RH 75
+GKPLGRG FG V A + + + L++ + EH+ L E++I H+ H
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 76 PNILRLYGYFYDQKR-VYLILEYAAKGELYKELQKCK----------------YFSERRA 118
N++ L G + +I+E+ G L L+ + + +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 119 ATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFN-----RRRTM 173
Y +A+ + + + IHRD+ N+L+ + +KI DFG + + R+
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 174 CGTLDYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKF 232
L ++ PE + + D+WS GVL +E F G P+ + + + R ++ +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 270
Query: 233 PPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEH 266
+ + + SQR +L+EH
Sbjct: 271 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 113/274 (41%), Gaps = 27/274 (9%)
Query: 20 IGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ--SQVEHQ-LRREVEIQSHL-RH 75
+GKPLGRG FG V A + + + L++ + EH+ L E++I H+ H
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 76 PNILRLYGYFYDQKR-VYLILEYAAKGELYKELQKCK----------------YFSERRA 118
N++ L G + +I+E+ G L L+ + + +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 119 ATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFN-----RRRTM 173
Y +A+ + + + IHRD+ N+L+ + +KI DFG + + R+
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 174 CGTLDYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKF 232
L ++ PE + + D+WS GVL +E F G P+ + + + R ++ +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 270
Query: 233 PPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEH 266
+ + + SQR +L+EH
Sbjct: 271 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 113/274 (41%), Gaps = 27/274 (9%)
Query: 20 IGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ--SQVEHQ-LRREVEIQSHL-RH 75
+GKPLGRG FG V A + + + L++ + EH+ L E++I H+ H
Sbjct: 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 127
Query: 76 PNILRLYGYFYDQKR-VYLILEYAAKGELYKELQKCK----------------YFSERRA 118
N++ L G + +I+E+ G L L+ + + +
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 119 ATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFN-----RRRTM 173
Y +A+ + + + IHRD+ N+L+ + +KI DFG + + R+
Sbjct: 188 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 174 CGTLDYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKF 232
L ++ PE + + D+WS GVL +E F G P+ + + + R ++ +
Sbjct: 248 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 307
Query: 233 PPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEH 266
+ + + SQR +L+EH
Sbjct: 308 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 112/279 (40%), Gaps = 37/279 (13%)
Query: 20 IGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ--SQVEHQ-LRREVEIQSHL-RH 75
+GKPLGRG FG V A + + + L++ + EH+ L E++I H+ H
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 76 PNILRLYG----------------------YFYDQKRVYLILEYAAKGELYKELQKCKYF 113
N++ L G + KR + A +LYK+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD-----FL 136
Query: 114 SERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFN----- 168
+ Y +A+ + + + IHRD+ N+L+ + +KI DFG + +
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 169 RRRTMCGTLDYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQ 227
R+ L ++ PE + + D+WS GVL +E F G P+ + + + R ++
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 256
Query: 228 VDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEH 266
+ + + + SQR +L+EH
Sbjct: 257 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 113/275 (41%), Gaps = 26/275 (9%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ--SQVEHQ-LRREVEIQSHL- 73
++GKPLGRG FG V A + + + L++ + EH+ L E++I H+
Sbjct: 30 LNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 89
Query: 74 RHPNILRLYGYFYDQKR-VYLILEYAAKGELYKELQKCK---------------YFSERR 117
H N++ L G + +I+E+ G L L+ + + +
Sbjct: 90 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEH 149
Query: 118 AATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFN-----RRRT 172
Y +A+ + + + IHRD+ N+L+ + +KI DFG + R+
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 173 MCGTLDYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLK 231
L ++ PE + + D+WS GVL +E F G P+ + + + R ++ +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 269
Query: 232 FPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEH 266
+ + + SQR +L+EH
Sbjct: 270 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 112/279 (40%), Gaps = 37/279 (13%)
Query: 20 IGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ--SQVEHQ-LRREVEIQSHL-RH 75
+GKPLGRG FG V A + + + L++ + EH+ L E++I H+ H
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 76 PNILRLYG----------------------YFYDQKRVYLILEYAAKGELYKELQKCKYF 113
N++ L G + KR + A +LYK+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD-----FL 136
Query: 114 SERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFN----- 168
+ Y +A+ + + + IHRD+ N+L+ + +KI DFG + +
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 169 RRRTMCGTLDYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQ 227
R+ L ++ PE + + D+WS GVL +E F G P+ + + + R ++
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 256
Query: 228 VDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEH 266
+ + + + SQR +L+EH
Sbjct: 257 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 130/298 (43%), Gaps = 50/298 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+++ + +GRGK+ V+ +N L+ + + R +Q+ +
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCI-----IKILKPVKKKKIKREIKILQNLMGG 85
Query: 76 PNILRLYGYFYDQ--KRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI++L DQ K LI EY + +K L ++ Y+ L +AL YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALDYCH 142
Query: 134 GKHVIHRDIKPENLLIGAQ-GELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
+ ++HRD+KP N++I + +L++ D+G + H + + PE +V+ +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPP- 234
+D ++D+WSLG + ++ P F ++ D +I +V ++ P
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 235 ----------KP-----------IVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
KP +VS A D + ++L D +RL + + HP+ Q
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 24 LGRGKFGHVYLAR--EKRSNHI-VALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILR 80
+G+G FG VY ++ N I A+K L S++ + Q RE + L HPN+L
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSL--SRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 81 LYGYFYDQKRV-YLILEYAAKGELYKELQKC-KYFSERRAATYVASLARALIYCHGKHVI 138
L G + + +++L Y G+L + ++ + + + ++ +AR + Y + +
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFV 146
Query: 139 HRDIKPENLLIGAQGELKIADFGWSVHTFNRR-------RTMCGTLDYLPPEMVESVEHD 191
HRD+ N ++ +K+ADFG + +R R + + E +++
Sbjct: 147 HRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFT 206
Query: 192 ANVDIWSLGVLCYEFLY-GVPPF 213
D+WS GVL +E L G PP+
Sbjct: 207 TKSDVWSFGVLLWELLTRGAPPY 229
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 79/190 (41%), Gaps = 12/190 (6%)
Query: 24 LGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYG 83
LG G+ G V++ + H KV KS Q S E + L+H ++RLY
Sbjct: 21 LGAGQAGEVWMGY--YNGHT---KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 84 YFYDQKRVYLILEYAAKGELYKELQKCK--YFSERRAATYVASLARALIYCHGKHVIHRD 141
Q+ +Y+I EY G L L+ + + A +A + + ++ IHRD
Sbjct: 76 VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 142 IKPENLLIGAQGELKIADFGWSV----HTFNRRRTMCGTLDYLPPEMVESVEHDANVDIW 197
++ N+L+ KIADFG + R + + PE + D+W
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 198 SLGVLCYEFL 207
S G+L E +
Sbjct: 195 SFGILLTEIV 204
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 97/222 (43%), Gaps = 35/222 (15%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEH-QLRREVEI----Q 70
N F +G+ +G G FG +YL ++N VA+K L+ + +H QL E +I Q
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKIYRILQ 60
Query: 71 SHLRHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI 130
PN+ R +G D Y +L G ++L + S + + V LA +I
Sbjct: 61 GGTGIPNV-RWFGVEGD----YNVLVMDLLGPSLEDL--FNFCSRKLSLKTVLMLADQMI 113
Query: 131 ----YCHGKHVIHRDIKPENLLIG---AQGELKIADFGW-------SVHT---FNRRRTM 173
+ H K +HRDIKP+N L+G ++ I DFG S H + + +
Sbjct: 114 NRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNL 173
Query: 174 CGTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEA 215
GT Y +E D+ SLG + FL G P++
Sbjct: 174 TGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 215
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 21/227 (9%)
Query: 16 NDFDIGKPLGRGKFGHVY---LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSH 72
N +GK LG G+FG V L +E ++ VA+K + Q ++E L E
Sbjct: 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLS-EAACMKD 92
Query: 73 LRHPNILRLYGYFYDQK-----RVYLILEYAAKGEL-----YKELQKC-KYFSERRAATY 121
HPN++RL G + + +IL + G+L Y L+ K+ + +
Sbjct: 93 FSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKF 152
Query: 122 VASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLP 181
+ +A + Y ++ +HRD+ N ++ + +ADFG S ++ G + +P
Sbjct: 153 MVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMP 212
Query: 182 PE--MVESVE---HDANVDIWSLGVLCYEFLY-GVPPFEAKEHSDTY 222
+ +ES+ + + D+W+ GV +E G+ P+ ++ + Y
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMY 259
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 115/275 (41%), Gaps = 31/275 (11%)
Query: 20 IGKPLGRGKFGHVYLAR-----EKRSNHIVALKVLFKSQLQQSQVEHQ-LRREVEIQSHL 73
+GKPLGRG FG V A + + VA+K+L + + EH+ L E++I H+
Sbjct: 33 LGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGA---THSEHRALMSELKILIHI 89
Query: 74 -RHPNILRLYGYFYDQKR-VYLILEYAAKGELYKELQKCK--------------YFSERR 117
H N++ L G + +I+E+ G L L+ + + +
Sbjct: 90 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEH 149
Query: 118 AATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFN-----RRRT 172
Y +A+ + + + IHRD+ N+L+ + +KI DFG + R+
Sbjct: 150 LIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 173 MCGTLDYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLK 231
L ++ PE + + D+WS GVL +E F G P+ + + + R ++ +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 269
Query: 232 FPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEH 266
+ + + SQR +L+EH
Sbjct: 270 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 34/210 (16%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSH--LRHPNIL 79
K +G+G++G V++ + + VA+KV F ++ E RE EI +RH NIL
Sbjct: 43 KQIGKGRYGEVWMGKWRGEK--VAVKVFFTTE------EASWFRETEIYQTVLMRHENIL 94
Query: 80 RLYGY----FYDQKRVYLILEYAAKGELYKELQKCKYFSE---RRAATYVASLA---RAL 129
++YLI +Y G LY L+ ++ + A + V+ L +
Sbjct: 95 GFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 130 IYCHGKHVI-HRDIKPENLLIGAQGELKIADFGWSVHTFNRR-------RTMCGTLDYLP 181
GK I HRD+K +N+L+ G IAD G +V + T GT Y+P
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMP 214
Query: 182 PEMV-ESVEHD-----ANVDIWSLGVLCYE 205
PE++ ES+ + D++S G++ +E
Sbjct: 215 PEVLDESLNRNHFQSYIMADMYSFGLILWE 244
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 112/274 (40%), Gaps = 27/274 (9%)
Query: 20 IGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ--SQVEHQ-LRREVEIQSHL-RH 75
+GKPLGRG FG V A + + + L++ + EH+ L E++I H+ H
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 76 PNILRLYGYFYDQKR-VYLILEYAAKGELYKELQKCK----------------YFSERRA 118
N++ L G + +I+E+ G L L+ + + +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 119 ATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFN-----RRRTM 173
Y +A+ + + + IHRD+ N+L+ + +KI DFG + R+
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 174 CGTLDYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKF 232
L ++ PE + + D+WS GVL +E F G P+ + + + R ++ +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 270
Query: 233 PPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEH 266
+ + + SQR +L+EH
Sbjct: 271 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 129/296 (43%), Gaps = 50/296 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+ + + LGRGK+ V+ A +N VA+K+L + ++ + E +++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKRE-----IKILENLRGG 91
Query: 76 PNILRLYGYFYD--QKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI+ L D + L+ E+ + + Q + R Y+ + +AL YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIR---FYMYEILKALDYCH 148
Query: 134 GKHVIHRDIKPENLLIGAQG-ELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
++HRD+KP N+LI + +L++ D+G + H + + PE +V+
Sbjct: 149 SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPPK 235
+D ++D+WSLG + ++ P F ++ D RI +V +++ P+
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 236 ----------------------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+VS A D + ++L D RL + +EHP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 112/274 (40%), Gaps = 27/274 (9%)
Query: 20 IGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ--SQVEHQ-LRREVEIQSHL-RH 75
+GKPLGRG FG V A + + + L++ + EH+ L E++I H+ H
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 76 PNILRLYGYFYDQKR-VYLILEYAAKGELYKELQKCK----------------YFSERRA 118
N++ L G + +I+E+ G L L+ + + +
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 119 ATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFN-----RRRTM 173
Y +A+ + + + IHRD+ N+L+ + +KI DFG + R+
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 174 CGTLDYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQVDLKF 232
L ++ PE + + D+WS GVL +E F G P+ + + + R ++ +
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 261
Query: 233 PPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEH 266
+ + + SQR +L+EH
Sbjct: 262 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 118/278 (42%), Gaps = 38/278 (13%)
Query: 17 DFDIGKPLGRGKFGHVYLAR----EKRSNHI-VALKVLFKSQLQQSQVEHQLRREVEIQS 71
+ + GK LG G FG V A K I VA+K+L K + S+ E L E+++ +
Sbjct: 46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKML-KEKADSSERE-ALMSELKMMT 103
Query: 72 HL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQ---------KCKYFSERRAA-- 119
L H NI+ L G +YLI EY G+L L+ + +Y +++R
Sbjct: 104 QLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 120 ------------TYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFG-----W 162
+ +A+ + + K +HRD+ N+L+ +KI DFG
Sbjct: 164 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 163 SVHTFNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDT 221
S + R + ++ PE + + D+WS G+L +E F GV P+
Sbjct: 224 SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN 283
Query: 222 YRRIVQVDLKFPPKPIVSSAAKDLISQMLVKDSSQRLP 259
+ +++Q K +P ++ +I Q S++ P
Sbjct: 284 FYKLIQNGFKM-DQPFYATEEIYIIMQSCWAFDSRKRP 320
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 129/298 (43%), Gaps = 50/298 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+++ + +GRGK+ V+ +N L+ + + R +Q+
Sbjct: 33 DDYEVVRKVGRGKYSEVFEGINVNNNEKCI-----IKILKPVKKKKIKREIKILQNLCGG 87
Query: 76 PNILRLYGYFYDQ--KRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI++L DQ K LI EY + +K L ++ Y+ L +AL YCH
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALDYCH 144
Query: 134 GKHVIHRDIKPENLLIGAQ-GELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
+ ++HRD+KP N++I + +L++ D+G + H + + PE +V+ +
Sbjct: 145 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 204
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPP- 234
+D ++D+WSLG + ++ P F ++ D +I +V ++ P
Sbjct: 205 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 264
Query: 235 ----------KP-----------IVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
KP +VS A D + ++L D +RL + + HP+ Q
Sbjct: 265 LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 322
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 129/298 (43%), Gaps = 50/298 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+++ + +GRGK+ V+ +N L+ + + R +Q+
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCI-----IKILKPVKKKKIKREIKILQNLXGG 85
Query: 76 PNILRLYGYFYDQ--KRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI++L DQ K LI EY + +K L ++ Y+ L +AL YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALDYCH 142
Query: 134 GKHVIHRDIKPENLLIGAQ-GELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
+ ++HRD+KP N++I + +L++ D+G + H + + PE +V+ +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPP- 234
+D ++D+WSLG + ++ P F ++ D +I +V ++ P
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 235 ----------KP-----------IVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
KP +VS A D + ++L D +RL + + HP+ Q
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 129/298 (43%), Gaps = 50/298 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+++ + +GRGK+ V+ +N L+ + + R +Q+
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCI-----IKILKPVKKKKIKREIKILQNLCGG 85
Query: 76 PNILRLYGYFYDQ--KRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI++L DQ K LI EY + +K L ++ Y+ L +AL YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALDYCH 142
Query: 134 GKHVIHRDIKPENLLIGAQ-GELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
+ ++HRD+KP N++I + +L++ D+G + H + + PE +V+ +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPP- 234
+D ++D+WSLG + ++ P F ++ D +I +V ++ P
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 235 ----------KP-----------IVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
KP +VS A D + ++L D +RL + + HP+ Q
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 129/298 (43%), Gaps = 50/298 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+++ + +GRGK+ V+ +N L+ + + R +Q+
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCI-----IKILKPVKKKKIKREIKILQNLXGG 85
Query: 76 PNILRLYGYFYDQ--KRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI++L DQ K LI EY + +K L ++ Y+ L +AL YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALDYCH 142
Query: 134 GKHVIHRDIKPENLLIGAQ-GELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
+ ++HRD+KP N++I + +L++ D+G + H + + PE +V+ +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPP- 234
+D ++D+WSLG + ++ P F ++ D +I +V ++ P
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 235 ----------KP-----------IVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
KP +VS A D + ++L D +RL + + HP+ Q
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 129/298 (43%), Gaps = 50/298 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+++ + +GRGK+ V+ +N L+ + + R +Q+
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNEKCI-----IKILKPVKKKKIKREIKILQNLXGG 86
Query: 76 PNILRLYGYFYDQ--KRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI++L DQ K LI EY + +K L ++ Y+ L +AL YCH
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALDYCH 143
Query: 134 GKHVIHRDIKPENLLIGAQ-GELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
+ ++HRD+KP N++I + +L++ D+G + H + + PE +V+ +
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 203
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPP- 234
+D ++D+WSLG + ++ P F ++ D +I +V ++ P
Sbjct: 204 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 263
Query: 235 ----------KP-----------IVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
KP +VS A D + ++L D +RL + + HP+ Q
Sbjct: 264 LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 129/298 (43%), Gaps = 50/298 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+++ + +GRGK+ V+ +N L+ + + R +Q+
Sbjct: 52 DDYEVVRKVGRGKYSEVFEGINVNNNEKCI-----IKILKPVKKKKIKREIKILQNLXGG 106
Query: 76 PNILRLYGYFYDQ--KRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI++L DQ K LI EY + +K L ++ Y+ L +AL YCH
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALDYCH 163
Query: 134 GKHVIHRDIKPENLLIGAQ-GELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
+ ++HRD+KP N++I + +L++ D+G + H + + PE +V+ +
Sbjct: 164 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 223
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPP- 234
+D ++D+WSLG + ++ P F ++ D +I +V ++ P
Sbjct: 224 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDPQ 283
Query: 235 ----------KP-----------IVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
KP +VS A D + ++L D +RL + + HP+ Q
Sbjct: 284 LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 341
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 23/217 (10%)
Query: 18 FDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
+IG+ +G+G+FG VY R VA++++ + + Q++ +REV RH N
Sbjct: 35 LEIGELIGKGRFGQVYHGRWHGE---VAIRLIDIERDNEDQLK-AFKREVMAYRQTRHEN 90
Query: 78 ILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAATYVAS-LARALIYCHGKH 136
++ G + +I LY ++ K + +A + + + Y H K
Sbjct: 91 VVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG 150
Query: 137 VIHRDIKPENLLIGAQGELKIADFGW----SVHTFNRR----RTMCGTLDYLPPEMVESV 188
++H+D+K +N+ G++ I DFG V RR R G L +L PE++ +
Sbjct: 151 ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQL 209
Query: 189 EHDA---------NVDIWSLGVLCYEFLYGVPPFEAK 216
D + D+++LG + YE PF+ +
Sbjct: 210 SPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ 246
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 129/298 (43%), Gaps = 50/298 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+++ + +GRGK+ V+ +N L+ + + R +Q+
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCI-----IKILKPVKKKKIKREIKILQNLCGG 85
Query: 76 PNILRLYGYFYDQ--KRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI++L DQ K LI EY + +K L ++ Y+ L +AL YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALDYCH 142
Query: 134 GKHVIHRDIKPENLLIGAQ-GELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
+ ++HRD+KP N++I + +L++ D+G + H + + PE +V+ +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPP- 234
+D ++D+WSLG + ++ P F ++ D +I +V ++ P
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 235 ----------KP-----------IVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
KP +VS A D + ++L D +RL + + HP+ Q
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 129/298 (43%), Gaps = 50/298 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+++ + +GRGK+ V+ +N L+ + + R +Q+
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNEKCI-----IKILKPVKKKKIKREIKILQNLCGG 86
Query: 76 PNILRLYGYFYDQ--KRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI++L DQ K LI EY + +K L ++ Y+ L +AL YCH
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALDYCH 143
Query: 134 GKHVIHRDIKPENLLIGAQ-GELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
+ ++HRD+KP N++I + +L++ D+G + H + + PE +V+ +
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 203
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPP- 234
+D ++D+WSLG + ++ P F ++ D +I +V ++ P
Sbjct: 204 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 263
Query: 235 ----------KP-----------IVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
KP +VS A D + ++L D +RL + + HP+ Q
Sbjct: 264 LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 129/298 (43%), Gaps = 50/298 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+++ + +GRGK+ V+ +N L+ + + R +Q+
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCI-----IKILKPVKKKKIKREIKILQNLXGG 85
Query: 76 PNILRLYGYFYDQ--KRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI++L DQ K LI EY + +K L ++ Y+ L +AL YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVLYPT--LTDYDIRYYIYELLKALDYCH 142
Query: 134 GKHVIHRDIKPENLLIGAQ-GELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
+ ++HRD+KP N++I + +L++ D+G + H + + PE +V+ +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPP- 234
+D ++D+WSLG + ++ P F ++ D +I +V ++ P
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 235 ----------KP-----------IVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIIQ 271
KP +VS A D + ++L D +RL + + HP+ Q
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 111/279 (39%), Gaps = 37/279 (13%)
Query: 20 IGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQ--SQVEHQ-LRREVEIQSHL-RH 75
+GKPLGRG FG V A + + + L++ + EH+ L E++I H+ H
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 76 PNILRLYG----------------------YFYDQKRVYLILEYAAKGELYKELQKCKYF 113
N++ L G + KR + A +LYK+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD-----FL 136
Query: 114 SERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFN----- 168
+ Y +A+ + + + IHRD+ N+L+ + +KI DFG +
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 169 RRRTMCGTLDYLPPEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRIVQ 227
R+ L ++ PE + + D+WS GVL +E F G P+ + + + R ++
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 256
Query: 228 VDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEH 266
+ + + + SQR +L+EH
Sbjct: 257 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 11/196 (5%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQ--LRREVEIQSHLRHPNIL 79
+ LG G FG V L +N V K+ +H+ ++E++I L H +I+
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 80 RLYGYFYDQ--KRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHV 137
+ G DQ K + L++EY G L L + + + + + Y H +H
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR-HSIGLAQLLLFAQQICEGMAYLHAQHY 138
Query: 138 IHRDIKPENLLIGAQGELKIADFGWSV-----HTFNR-RRTMCGTLDYLPPEMVESVEHD 191
IHR++ N+L+ +KI DFG + H + R R + + PE ++ +
Sbjct: 139 IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFY 198
Query: 192 ANVDIWSLGVLCYEFL 207
D+WS GV YE L
Sbjct: 199 YASDVWSFGVTLYELL 214
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 11/196 (5%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQ--LRREVEIQSHLRHPNIL 79
+ LG G FG V L +N V K+ +H+ ++E++I L H +I+
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 80 RLYGYFYDQ--KRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHV 137
+ G DQ K + L++EY G L L + + + + + Y H +H
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR-HSIGLAQLLLFAQQICEGMAYLHSQHY 138
Query: 138 IHRDIKPENLLIGAQGELKIADFGWSV-----HTFNR-RRTMCGTLDYLPPEMVESVEHD 191
IHR++ N+L+ +KI DFG + H + R R + + PE ++ +
Sbjct: 139 IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFY 198
Query: 192 ANVDIWSLGVLCYEFL 207
D+WS GV YE L
Sbjct: 199 YASDVWSFGVTLYELL 214
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 110/295 (37%), Gaps = 83/295 (28%)
Query: 15 LNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLR 74
L DF+ + +GRG FG V+ A+ K + A+K + + ++ ++ REV+ + L
Sbjct: 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR--EKVMREVKALAKLE 62
Query: 75 HPNILRLYGY---------------------------------------------FYDQK 89
HP I+R + F +
Sbjct: 63 HPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKN 122
Query: 90 RVYLILEYAAKGELYKELQKC-----KYFSERRAAT----------YVASLARALIYCHG 134
V + + K LY ++Q C K + RR + +A A+ + H
Sbjct: 123 TVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHS 182
Query: 135 KHVIHRDIKPENLLIGAQGELKIADFGW---------------SVHTFNRRRTMCGTLDY 179
K ++HRD+KP N+ +K+ DFG + + GT Y
Sbjct: 183 KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLY 242
Query: 180 LPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQV-DLKFP 233
+ PE + + VDI+SLG++ +E LY + R I V +LKFP
Sbjct: 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSF-----STQMERVRIITDVRNLKFP 292
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 99/242 (40%), Gaps = 32/242 (13%)
Query: 16 NDFDIGKPLGRGKFGHVYLAR-----EKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
N GK LG G FG V A + + VA+K+L K ++ E L E+++
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML-KPSAHLTERE-ALMSELKVL 103
Query: 71 SHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK------CKYFS--------- 114
S+L H NI+ L G +I EY G+L L++ C S
Sbjct: 104 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 163
Query: 115 ---ERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRR 171
++ +A+ + + K+ IHRD+ N+L+ KI DFG + H N
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSN 223
Query: 172 TMCGTLDYLP-----PEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRI 225
+ LP PE + + + D+WS G+ +E F G P+ + ++
Sbjct: 224 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 283
Query: 226 VQ 227
++
Sbjct: 284 IK 285
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 22/221 (9%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI-------QSHLR 74
+ LG G F V+LA++ +N VA+K++ ++ E +++ + + +
Sbjct: 25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 84
Query: 75 HPNILRLYGYFYDQ--KRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI-- 130
+IL+L +F + V++++ + GE L K KY YV +++ L+
Sbjct: 85 ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIK-KYEHRGIPLIYVKQISKQLLLG 143
Query: 131 --YCHGK-HVIHRDIKPENLLIGAQG------ELKIADFGWSVHTFNRRRTMCGTLDYLP 181
Y H + +IH DIKPEN+L+ ++KIAD G + T +Y
Sbjct: 144 LDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRS 203
Query: 182 PEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKE-HSDT 221
PE++ DIWS L +E + G FE E HS T
Sbjct: 204 PEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYT 244
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 22/221 (9%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEI-------QSHLR 74
+ LG G F V+LA++ +N VA+K++ ++ E +++ + + +
Sbjct: 25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 84
Query: 75 HPNILRLYGYFYDQ--KRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALI-- 130
+IL+L +F + V++++ + GE L K KY YV +++ L+
Sbjct: 85 ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIK-KYEHRGIPLIYVKQISKQLLLG 143
Query: 131 --YCHGK-HVIHRDIKPENLLIGAQG------ELKIADFGWSVHTFNRRRTMCGTLDYLP 181
Y H + +IH DIKPEN+L+ ++KIAD G + T +Y
Sbjct: 144 LDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRS 203
Query: 182 PEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKE-HSDT 221
PE++ DIWS L +E + G FE E HS T
Sbjct: 204 PEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYT 244
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 22/202 (10%)
Query: 24 LGRGKFGHVYLAREK-----RSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNI 78
LG+G FG VY + + VA+K + +S + ++E E + ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFTCHHV 82
Query: 79 LRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAA----------TYVASLARA 128
+RL G + +++E A G+L L+ + +E A +A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 129 LIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS---VHTFNRRRTMCGTLD--YLPPE 183
+ Y + K +HRD+ N ++ +KI DFG + T R+ G L ++ PE
Sbjct: 143 MAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPE 202
Query: 184 MVESVEHDANVDIWSLGVLCYE 205
++ + D+WS GV+ +E
Sbjct: 203 SLKDGVFTTSSDMWSFGVVLWE 224
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 22 KPLGRGKFGHVYLAREK-----RSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
+ LG+G FG VY + + VA+K + +S + ++E E +
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFTCH 80
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAA----------TYVASLA 126
+++RL G + +++E A G+L L+ + +E A +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS---VHTFNRRRTMCGTLD--YLP 181
+ Y + K +HRD+ N ++ +KI DFG + T R+ G L ++
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 182 PEMVESVEHDANVDIWSLGVLCYEF 206
PE ++ + D+WS GV+ +E
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 129/296 (43%), Gaps = 50/296 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+ + + LGRGK+ V+ A +N + + L+ + + R +++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNN-----EKVVVKILKPVKKKKIKREIKILENLRGG 91
Query: 76 PNILRLYGYFYD--QKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI+ L D + L+ E+ + +K+L++ ++ Y+ + +AL YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLRQT--LTDYDIRFYMYEILKALDYCH 148
Query: 134 GKHVIHRDIKPENLLIGAQG-ELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
++HRD+KP N++I + +L++ D+G + H + + PE +V+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPPK 235
+D ++D+WSLG + ++ P F ++ D RI +V +++ P+
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 236 ----------------------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+VS A D + ++L D RL + +EHP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 22 KPLGRGKFGHVYLAREK-----RSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
+ LG+G FG VY + + VA+K + +S + ++E E +
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFTCH 77
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAA----------TYVASLA 126
+++RL G + +++E A G+L L+ + +E A +A
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWS---VHTFNRRRTMCGTLD--YLP 181
+ Y + K +HRD+ N ++ +KI DFG + T R+ G L ++
Sbjct: 138 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 182 PEMVESVEHDANVDIWSLGVLCYEF 206
PE ++ + D+WS GV+ +E
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 124/298 (41%), Gaps = 50/298 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVL--FKSQLQQSQVEHQLRREVEIQSHL 73
N F + + +G G FG V L + + A+KV+ K + +++E + ++++
Sbjct: 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDIN 94
Query: 74 RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKY--FSERRAATYVASLARALIY 131
+ + + +G F + LI E LY+ + + Y F Y + +AL Y
Sbjct: 95 NNNIV-KYHGKFMYYDHMCLIFEPLGPS-LYEIITRNNYNGFHIEDIKLYCIEILKALNY 152
Query: 132 CHGKHVIHRDIKPENLLIG--------------AQGE-----------LKIADFGWSVHT 166
+ H D+KPEN+L+ G+ +K+ DFG +
Sbjct: 153 LRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFK 212
Query: 167 FNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIV 226
+ ++ T Y PE++ ++ D + D+WS G + E G F EH + + ++
Sbjct: 213 SDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHME-HLAMM 271
Query: 227 QVDLKFPPKPIVSSAAKDLISQMLVKDS------------------SQRLPLHKLLEH 266
+ ++ PK ++ A K S+ + KD + LPL+K+++H
Sbjct: 272 ESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKH 329
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 95/218 (43%), Gaps = 17/218 (7%)
Query: 24 LGRGKFGHVY----LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
+GRG FG VY L + + H A+K L +++ Q E I HPN+L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 80 RLYGY-FYDQKRVYLILEYAAKGELYKELQKCKYF-SERRAATYVASLARALIYCHGKHV 137
L G + ++L Y G+L ++ + + + + +A+ + Y K
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 153
Query: 138 IHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGT-------LDYLPPEMVESVEH 190
+HRD+ N ++ + +K+ADFG + +++ + ++ E +++ +
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKF 213
Query: 191 DANVDIWSLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQ 227
D+WS GVL +E + G PP+ D ++Q
Sbjct: 214 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 251
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 24 LGRGKFGHVY----LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
+GRG FG VY L + + H A+K L +++ Q E I HPN+L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 80 RLYGY-FYDQKRVYLILEYAAKGELYKELQKCKYF-SERRAATYVASLARALIYCHGKHV 137
L G + ++L Y G+L ++ + + + + +A+ + Y K
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 172
Query: 138 IHRDIKPENLLIGAQGELKIADFG----------WSVHTFNRRRTMCGTLDYLPPEMVES 187
+HRD+ N ++ + +K+ADFG +SVH + + ++ E +++
Sbjct: 173 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PVKWMALESLQT 229
Query: 188 VEHDANVDIWSLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQ 227
+ D+WS GVL +E + G PP+ D ++Q
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 270
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 24 LGRGKFGHVY----LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
+GRG FG VY L + + H A+K L +++ Q E I HPN+L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 80 RLYGY-FYDQKRVYLILEYAAKGELYKELQKCKYF-SERRAATYVASLARALIYCHGKHV 137
L G + ++L Y G+L ++ + + + + +A+ + Y K
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 173
Query: 138 IHRDIKPENLLIGAQGELKIADFG----------WSVHTFNRRRTMCGTLDYLPPEMVES 187
+HRD+ N ++ + +K+ADFG +SVH + + ++ E +++
Sbjct: 174 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PVKWMALESLQT 230
Query: 188 VEHDANVDIWSLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQ 227
+ D+WS GVL +E + G PP+ D ++Q
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 271
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 125/296 (42%), Gaps = 50/296 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+ + + LGRGK+ V+ A +N + + L+ + + R +++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNN-----EKVVVKILKPVKKKKIKREIKILENLRGG 91
Query: 76 PNILRLYGYFYD--QKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI+ L D + L+ E+ + + Q + R Y+ + +AL YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIR---FYMYEILKALDYCH 148
Query: 134 GKHVIHRDIKPENLLIGAQG-ELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
++HRD+KP N++I + +L++ D+G + H + + PE +V+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPPK 235
+D ++D+WSLG + ++ P F ++ D RI +V +++ P+
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 236 ----------------------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+VS A D + ++L D RL + +EHP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 24 LGRGKFGHVY----LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
+GRG FG VY L + + H A+K L +++ Q E I HPN+L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 80 RLYGY-FYDQKRVYLILEYAAKGELYKELQKCKYF-SERRAATYVASLARALIYCHGKHV 137
L G + ++L Y G+L ++ + + + + +A+ + Y K
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 146
Query: 138 IHRDIKPENLLIGAQGELKIADFG----------WSVHTFNRRRTMCGTLDYLPPEMVES 187
+HRD+ N ++ + +K+ADFG +SVH + + ++ E +++
Sbjct: 147 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PVKWMALESLQT 203
Query: 188 VEHDANVDIWSLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQ 227
+ D+WS GVL +E + G PP+ D ++Q
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 244
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 11/196 (5%)
Query: 22 KPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQ--LRREVEIQSHLRHPNIL 79
+ LG G FG V L +N V K+ + +H+ ++E++I L H +I+
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 80 RLYGYFYDQ--KRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHV 137
+ G D + L++EY G L L + + + + + Y H +H
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR-HSIGLAQLLLFAQQICEGMAYLHAQHY 155
Query: 138 IHRDIKPENLLIGAQGELKIADFGWSV------HTFNRRRTMCGTLDYLPPEMVESVEHD 191
IHRD+ N+L+ +KI DFG + + R + + PE ++ +
Sbjct: 156 IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFY 215
Query: 192 ANVDIWSLGVLCYEFL 207
D+WS GV YE L
Sbjct: 216 YASDVWSFGVTLYELL 231
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 23/216 (10%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKV-LFKSQLQQSQVEHQLRREVEIQSHLRH 75
+F +GK +G G FG + L + +N VA+K+ KS+ Q +E++ +++
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGD---- 65
Query: 76 PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKC-KYFSERRAATYVASLARALIYCHG 134
I ++Y + K ++LE L C + FS + L + Y H
Sbjct: 66 -GIPQVYYFGPCGKYNAMVLELLGP-SLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS 123
Query: 135 KHVIHRDIKPENLLIGAQGE-----LKIADFGWSVH----------TFNRRRTMCGTLDY 179
K++I+RD+KPEN LIG G + I DFG + + +++ GT Y
Sbjct: 124 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARY 183
Query: 180 LPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEA 215
+ E D+ +LG + FL G P++
Sbjct: 184 MSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQG 219
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 125/296 (42%), Gaps = 50/296 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+ + + LGRGK+ V+ A +N + + L+ + + R +++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNN-----EKVVVKILKPVKKKKIKREIKILENLRGG 91
Query: 76 PNILRLYGYFYD--QKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI+ L D + L+ E+ + + Q + R Y+ + +AL YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIR---FYMYEILKALDYCH 148
Query: 134 GKHVIHRDIKPENLLIGAQG-ELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
++HRD+KP N++I + +L++ D+G + H + + PE +V+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPPK 235
+D ++D+WSLG + ++ P F ++ D RI +V +++ P+
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 236 ----------------------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+VS A D + ++L D RL + +EHP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 24 LGRGKFGHVY----LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
+GRG FG VY L + + H A+K L +++ Q E I HPN+L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 80 RLYGY-FYDQKRVYLILEYAAKGELYKELQKCKYF-SERRAATYVASLARALIYCHGKHV 137
L G + ++L Y G+L ++ + + + + +A+ + Y K
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 154
Query: 138 IHRDIKPENLLIGAQGELKIADFG----------WSVHTFNRRRTMCGTLDYLPPEMVES 187
+HRD+ N ++ + +K+ADFG +SVH + + ++ E +++
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PVKWMALESLQT 211
Query: 188 VEHDANVDIWSLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQ 227
+ D+WS GVL +E + G PP+ D ++Q
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 252
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 125/296 (42%), Gaps = 50/296 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+ + + LGRGK+ V+ A +N + + L+ + + R +++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNN-----EKVVVKILKPVKKKKIKREIKILENLRGG 91
Query: 76 PNILRLYGYFYD--QKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI+ L D + L+ E+ + + Q + R Y+ + +AL YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIR---FYMYEILKALDYCH 148
Query: 134 GKHVIHRDIKPENLLIGAQG-ELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
++HRD+KP N++I + +L++ D+G + H + + PE +V+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPPK 235
+D ++D+WSLG + ++ P F ++ D RI +V +++ P+
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 236 ----------------------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+VS A D + ++L D RL + +EHP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 24 LGRGKFGHVY----LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
+GRG FG VY L + + H A+K L +++ Q E I HPN+L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 80 RLYGY-FYDQKRVYLILEYAAKGELYKELQKCKYF-SERRAATYVASLARALIYCHGKHV 137
L G + ++L Y G+L ++ + + + + +A+ + Y K
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 151
Query: 138 IHRDIKPENLLIGAQGELKIADFG----------WSVHTFNRRRTMCGTLDYLPPEMVES 187
+HRD+ N ++ + +K+ADFG +SVH + + ++ E +++
Sbjct: 152 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PVKWMALESLQT 208
Query: 188 VEHDANVDIWSLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQ 227
+ D+WS GVL +E + G PP+ D ++Q
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 249
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 125/296 (42%), Gaps = 50/296 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+ + + LGRGK+ V+ A +N + + L+ + + R +++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNN-----EKVVVKILKPVKKKKIKREIKILENLRGG 91
Query: 76 PNILRLYGYFYD--QKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI+ L D + L+ E+ + + Q + R Y+ + +AL YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIR---FYMYEILKALDYCH 148
Query: 134 GKHVIHRDIKPENLLIGAQG-ELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
++HRD+KP N++I + +L++ D+G + H + + PE +V+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPPK 235
+D ++D+WSLG + ++ P F ++ D RI +V +++ P+
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 236 ----------------------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+VS A D + ++L D RL + +EHP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 125/296 (42%), Gaps = 50/296 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+ + + LGRGK+ V+ A +N + + L+ + + R +++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNN-----EKVVVKILKPVKKKKIKREIKILENLRGG 91
Query: 76 PNILRLYGYFYD--QKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI+ L D + L+ E+ + + Q + R Y+ + +AL YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIR---FYMYEILKALDYCH 148
Query: 134 GKHVIHRDIKPENLLIGAQG-ELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
++HRD+KP N++I + +L++ D+G + H + + PE +V+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPPK 235
+D ++D+WSLG + ++ P F ++ D RI +V +++ P+
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 236 ----------------------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+VS A D + ++L D RL + +EHP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 125/296 (42%), Gaps = 50/296 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+ + + LGRGK+ V+ A +N + + L+ + + R +++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNN-----EKVVVKILKPVKKKKIKREIKILENLRGG 91
Query: 76 PNILRLYGYFYD--QKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI+ L D + L+ E+ + + Q + R Y+ + +AL YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIR---FYMYEILKALDYCH 148
Query: 134 GKHVIHRDIKPENLLIGAQG-ELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
++HRD+KP N++I + +L++ D+G + H + + PE +V+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPPK 235
+D ++D+WSLG + ++ P F ++ D RI +V +++ P+
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 236 ----------------------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+VS A D + ++L D RL + +EHP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 125/296 (42%), Gaps = 50/296 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+ + + LGRGK+ V+ A +N + + L+ + + R +++
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNN-----EKVVVKILKPVKKKKIKREIKILENLRGG 90
Query: 76 PNILRLYGYFYD--QKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI+ L D + L+ E+ + + Q + R Y+ + +AL YCH
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIR---FYMYEILKALDYCH 147
Query: 134 GKHVIHRDIKPENLLIGAQG-ELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
++HRD+KP N++I + +L++ D+G + H + + PE +V+
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 207
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPPK 235
+D ++D+WSLG + ++ P F ++ D RI +V +++ P+
Sbjct: 208 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 267
Query: 236 ----------------------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+VS A D + ++L D RL + +EHP+
Sbjct: 268 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 125/296 (42%), Gaps = 50/296 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+ + + LGRGK+ V+ A +N + + L+ + + R +++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNN-----EKVVVKILKPVKKKKIKREIKILENLRGG 91
Query: 76 PNILRLYGYFYD--QKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI+ L D + L+ E+ + + Q + R Y+ + +AL YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIR---FYMYEILKALDYCH 148
Query: 134 GKHVIHRDIKPENLLIGAQG-ELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
++HRD+KP N++I + +L++ D+G + H + + PE +V+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPPK 235
+D ++D+WSLG + ++ P F ++ D RI +V +++ P+
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 236 ----------------------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+VS A D + ++L D RL + +EHP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 22/213 (10%)
Query: 20 IGKPLGRGKFGHVYLAREKRSNHIVALKV-LFKSQLQQSQVEHQLRREVEIQSHLRHPNI 78
+GK +G G FG + L + +N VA+K+ KS+ Q +E++ +++ +
Sbjct: 4 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAGE----GL 59
Query: 79 LRLYGYFYDQKRVYLILEYAAKGELYKELQKC-KYFSERRAATYVASLARALIYCHGKHV 137
++Y + K ++LE L C + F+ + L + Y H K++
Sbjct: 60 PQVYYFGPXGKYNAMVLELLGP-SLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKNL 118
Query: 138 IHRDIKPENLLIGAQGELK-----IADFGWSVH----------TFNRRRTMCGTLDYLPP 182
I+RD+KPEN LIG QG K I DFG + + +++ GT Y+
Sbjct: 119 IYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSI 178
Query: 183 EMVESVEHDANVDIWSLGVLCYEFLYGVPPFEA 215
E D+ +LG + FL G P++
Sbjct: 179 NTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQG 211
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 100/249 (40%), Gaps = 14/249 (5%)
Query: 20 IGKPLGRGKFGHVYLAREK---RSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
I K +G G G V R + + + VA+K L K+ + Q E I HP
Sbjct: 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL-KAGYTERQ-RRDFLSEASIMGQFDHP 110
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQK-CKYFSERRAATYVASLARALIYCHGK 135
NI+RL G + ++ EY G L L+ F+ + + + + Y
Sbjct: 111 NIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWS---VHTFNRRRTMCGT---LDYLPPEMVESVE 189
+HRD+ N+L+ + K++DFG S + T G + + PE +
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT 230
Query: 190 HDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
+ D+WS GV+ +E L YG P+ + D V+ + P A L+
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISS-VEEGYRLPAPMGCPHALHQLMLD 289
Query: 249 MLVKDSSQR 257
KD +QR
Sbjct: 290 CWHKDRAQR 298
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 24 LGRGKFGHVY----LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
+GRG FG VY L + + H A+K L +++ Q E I HPN+L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 80 RLYGY-FYDQKRVYLILEYAAKGELYKELQKCKYF-SERRAATYVASLARALIYCHGKHV 137
L G + ++L Y G+L ++ + + + + +A+ + Y K
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 152
Query: 138 IHRDIKPENLLIGAQGELKIADFG----------WSVHTFNRRRTMCGTLDYLPPEMVES 187
+HRD+ N ++ + +K+ADFG +SVH + + ++ E +++
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PVKWMALESLQT 209
Query: 188 VEHDANVDIWSLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQ 227
+ D+WS GVL +E + G PP+ D ++Q
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 250
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 22 KPLGRGKFGHVYLAREK-----RSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
+ LG+G FG VY + + VA+K + +S + ++E E +
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFTCH 79
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAA----------TYVASLA 126
+++RL G + +++E A G+L L+ + +E A +A
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNR---RRTMCGTLD--YLP 181
+ Y + K +HRD+ N ++ +KI DFG + + R+ G L ++
Sbjct: 140 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 182 PEMVESVEHDANVDIWSLGVLCYEF 206
PE ++ + D+WS GV+ +E
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 125/296 (42%), Gaps = 50/296 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+ + + LGRGK+ V+ A +N + + L+ + + R +++
Sbjct: 42 DDYQLVRKLGRGKYSEVFEAINITNN-----EKVVVKILKPVKKKKIKREIKILENLRGG 96
Query: 76 PNILRLYGYFYD--QKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI+ L D + L+ E+ + + Q + R Y+ + +AL YCH
Sbjct: 97 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIR---FYMYEILKALDYCH 153
Query: 134 GKHVIHRDIKPENLLIGAQG-ELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
++HRD+KP N++I + +L++ D+G + H + + PE +V+
Sbjct: 154 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 213
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPPK 235
+D ++D+WSLG + ++ P F ++ D RI +V +++ P+
Sbjct: 214 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 273
Query: 236 ----------------------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+VS A D + ++L D RL + +EHP+
Sbjct: 274 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 125/296 (42%), Gaps = 50/296 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+ + + LGRGK+ V+ A +N + + L+ + + R +++
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNN-----EKVVVKILKPVKKKKIKREIKILENLRGG 90
Query: 76 PNILRLYGYFYD--QKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI+ L D + L+ E+ + + Q + R Y+ + +AL YCH
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIR---FYMYEILKALDYCH 147
Query: 134 GKHVIHRDIKPENLLIGAQG-ELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
++HRD+KP N++I + +L++ D+G + H + + PE +V+
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 207
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPPK 235
+D ++D+WSLG + ++ P F ++ D RI +V +++ P+
Sbjct: 208 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 267
Query: 236 ----------------------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+VS A D + ++L D RL + +EHP+
Sbjct: 268 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 125/296 (42%), Gaps = 50/296 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+ + + LGRGK+ V+ A +N + + L+ + + R +++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNN-----EKVVVKILKPVKKKKIKREIKILENLRGG 91
Query: 76 PNILRLYGYFYD--QKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI+ L D + L+ E+ + + Q + R Y+ + +AL YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIR---FYMYEILKALDYCH 148
Query: 134 GKHVIHRDIKPENLLIGAQG-ELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
++HRD+KP N++I + +L++ D+G + H + + PE +V+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPPK 235
+D ++D+WSLG + ++ P F ++ D RI +V +++ P+
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 236 ----------------------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+VS A D + ++L D RL + +EHP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 24 LGRGKFGHVY----LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
+GRG FG VY L + + H A+K L +++ Q E I HPN+L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 80 RLYGY-FYDQKRVYLILEYAAKGELYKELQKCKYF-SERRAATYVASLARALIYCHGKHV 137
L G + ++L Y G+L ++ + + + + +A+ + Y K
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 153
Query: 138 IHRDIKPENLLIGAQGELKIADFG----------WSVHTFNRRRTMCGTLDYLPPEMVES 187
+HRD+ N ++ + +K+ADFG +SVH + + ++ E +++
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PVKWMALESLQT 210
Query: 188 VEHDANVDIWSLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQ 227
+ D+WS GVL +E + G PP+ D ++Q
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 251
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 24 LGRGKFGHVY----LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
+GRG FG VY L + + H A+K L +++ Q E I HPN+L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 80 RLYGY-FYDQKRVYLILEYAAKGELYKELQKCKYF-SERRAATYVASLARALIYCHGKHV 137
L G + ++L Y G+L ++ + + + + +A+ + Y K
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 154
Query: 138 IHRDIKPENLLIGAQGELKIADFG----------WSVHTFNRRRTMCGTLDYLPPEMVES 187
+HRD+ N ++ + +K+ADFG +SVH + + ++ E +++
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PVKWMALESLQT 211
Query: 188 VEHDANVDIWSLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQ 227
+ D+WS GVL +E + G PP+ D ++Q
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 252
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 24 LGRGKFGHVY----LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
+GRG FG VY L + + H A+K L +++ Q E I HPN+L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 80 RLYGY-FYDQKRVYLILEYAAKGELYKELQKCKYF-SERRAATYVASLARALIYCHGKHV 137
L G + ++L Y G+L ++ + + + + +A+ + Y K
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 149
Query: 138 IHRDIKPENLLIGAQGELKIADFG----------WSVHTFNRRRTMCGTLDYLPPEMVES 187
+HRD+ N ++ + +K+ADFG +SVH + + ++ E +++
Sbjct: 150 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PVKWMALESLQT 206
Query: 188 VEHDANVDIWSLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQ 227
+ D+WS GVL +E + G PP+ D ++Q
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 247
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 22/204 (10%)
Query: 22 KPLGRGKFGHVYLAREK-----RSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
+ LG+G FG VY + + VA+K + +S + ++E E +
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFTCH 80
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAA----------TYVASLA 126
+++RL G + +++E A G+L L+ + +E A +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNR---RRTMCGTLD--YLP 181
+ Y + K +HRD+ N ++ +KI DFG + + R+ G L ++
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 182 PEMVESVEHDANVDIWSLGVLCYE 205
PE ++ + D+WS GV+ +E
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 22/204 (10%)
Query: 22 KPLGRGKFGHVYLAREK-----RSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
+ LG+G FG VY + + VA+K + +S + ++E E +
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFTCH 80
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQKCKYFSERRAA----------TYVASLA 126
+++RL G + +++E A G+L L+ + +E A +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 127 RALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNR---RRTMCGTLD--YLP 181
+ Y + K +HRD+ N ++ +KI DFG + + R+ G L ++
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 182 PEMVESVEHDANVDIWSLGVLCYE 205
PE ++ + D+WS GV+ +E
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 125/296 (42%), Gaps = 50/296 (16%)
Query: 16 NDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRH 75
+D+ + + LGRGK+ V+ A +N + + L+ + + R +++
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNN-----EKVVVKILKPVKKKKIKREIKILENLRGG 89
Query: 76 PNILRLYGYFYD--QKRVYLILEYAAKGELYKELQKCKYFSERRAATYVASLARALIYCH 133
PNI+ L D + L+ E+ + + Q + R Y+ + +AL YCH
Sbjct: 90 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIR---FYMYEILKALDYCH 146
Query: 134 GKHVIHRDIKPENLLIGAQG-ELKIADFGWS--VHTFNRRRTMCGTLDYLPPE-MVESVE 189
++HRD+KP N++I + +L++ D+G + H + + PE +V+
Sbjct: 147 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 206
Query: 190 HDANVDIWSLGVLCYEFLYGVPP-FEAKEHSDTYRRIVQV-------------DLKFPPK 235
+D ++D+WSLG + ++ P F ++ D RI +V +++ P+
Sbjct: 207 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 266
Query: 236 ----------------------PIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWI 269
+VS A D + ++L D RL + +EHP+
Sbjct: 267 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 100/249 (40%), Gaps = 14/249 (5%)
Query: 20 IGKPLGRGKFGHVYLAREK---RSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHP 76
I K +G G G V R + + + VA+K L K+ + Q E I HP
Sbjct: 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL-KAGYTERQ-RRDFLSEASIMGQFDHP 110
Query: 77 NILRLYGYFYDQKRVYLILEYAAKGELYKELQK-CKYFSERRAATYVASLARALIYCHGK 135
NI+RL G + ++ EY G L L+ F+ + + + + Y
Sbjct: 111 NIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 136 HVIHRDIKPENLLIGAQGELKIADFGWS---VHTFNRRRTMCGT---LDYLPPEMVESVE 189
+HRD+ N+L+ + K++DFG S + T G + + PE +
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT 230
Query: 190 HDANVDIWSLGVLCYEFL-YGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSAAKDLISQ 248
+ D+WS GV+ +E L YG P+ + D V+ + P A L+
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISS-VEEGYRLPAPMGCPHALHQLMLD 289
Query: 249 MLVKDSSQR 257
KD +QR
Sbjct: 290 CWHKDRAQR 298
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 22 KPLGRGKFGHVY---LAREKRSNHI-VALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
K LG G FG VY E + I VA+K+L ++ ++ VE E I + + HP+
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE--FMDEALIMASMDHPH 78
Query: 78 ILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHGKH 136
++RL G + L+ + G L + + + K + + +A+ ++Y +
Sbjct: 79 LVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR 137
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWS--VHTFNRRRTMCG---TLDYLPPEMVESVEHD 191
++HRD+ N+L+ + +KI DFG + + + G + ++ E + +
Sbjct: 138 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFT 197
Query: 192 ANVDIWSLGVLCYEFL-YGVPPFEA 215
D+WS GV +E + +G P++
Sbjct: 198 HQSDVWSYGVTIWELMTFGGKPYDG 222
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 32/242 (13%)
Query: 16 NDFDIGKPLGRGKFGHVYLAR-----EKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
N GK LG G FG V A + + VA+K+L K ++ E L E+++
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML-KPSAHLTERE-ALMSELKVL 80
Query: 71 SHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK------CKYFS--------- 114
S+L H NI+ L G +I EY G+L L++ C S
Sbjct: 81 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 140
Query: 115 ---ERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRR 171
++ +A+ + + K+ IHRD+ N+L+ KI DFG + N
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 200
Query: 172 TMCGTLDYLP-----PEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRI 225
+ LP PE + + + D+WS G+ +E F G P+ + ++
Sbjct: 201 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 260
Query: 226 VQ 227
++
Sbjct: 261 IK 262
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 22 KPLGRGKFGHVY---LAREKRSNHI-VALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPN 77
K LG G FG VY E + I VA+K+L ++ ++ VE E I + + HP+
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE--FMDEALIMASMDHPH 101
Query: 78 ILRLYGYFYDQKRVYLILEYAAKGELYKELQKCK-YFSERRAATYVASLARALIYCHGKH 136
++RL G + L+ + G L + + + K + + +A+ ++Y +
Sbjct: 102 LVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR 160
Query: 137 VIHRDIKPENLLIGAQGELKIADFGWS--VHTFNRRRTMCG---TLDYLPPEMVESVEHD 191
++HRD+ N+L+ + +KI DFG + + + G + ++ E + +
Sbjct: 161 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFT 220
Query: 192 ANVDIWSLGVLCYEFL-YGVPPFEA 215
D+WS GV +E + +G P++
Sbjct: 221 HQSDVWSYGVTIWELMTFGGKPYDG 245
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 32/242 (13%)
Query: 16 NDFDIGKPLGRGKFGHVYLAR-----EKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
N GK LG G FG V A + + VA+K+L K ++ E L E+++
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML-KPSAHLTERE-ALMSELKVL 96
Query: 71 SHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK------CKYFS--------- 114
S+L H NI+ L G +I EY G+L L++ C S
Sbjct: 97 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 156
Query: 115 ---ERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRR 171
++ +A+ + + K+ IHRD+ N+L+ KI DFG + N
Sbjct: 157 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 216
Query: 172 TMCGTLDYLP-----PEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRI 225
+ LP PE + + + D+WS G+ +E F G P+ + ++
Sbjct: 217 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 276
Query: 226 VQ 227
++
Sbjct: 277 IK 278
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 23/216 (10%)
Query: 17 DFDIGKPLGRGKFGHVYLAREKRSNHIVALKV-LFKSQLQQSQVEHQLRREVEIQSHLRH 75
+F +GK +G G FG + L + +N VA+K+ KS+ Q +E++ +++
Sbjct: 5 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSATE---- 60
Query: 76 PNILRLYGYFYDQKRVYLILEYAAKGELYKELQKC-KYFSERRAATYVASLARALIYCHG 134
+ ++Y + K ++LE L C + F+ + L + Y H
Sbjct: 61 -GVPQVYYFGPXGKYNAMVLELLGP-SLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHT 118
Query: 135 KHVIHRDIKPENLLIGAQGE-----LKIADFGWSVH----------TFNRRRTMCGTLDY 179
K +I+RD+KPEN L+G G + I DFG + + +++ GT Y
Sbjct: 119 KSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARY 178
Query: 180 LPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEA 215
+ E D+ +LG + FL G P++
Sbjct: 179 MSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQG 214
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 17/218 (7%)
Query: 24 LGRGKFGHVY----LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
+GRG FG VY L + + H A+K L +++ Q E I HPN+L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 80 RLYGY-FYDQKRVYLILEYAAKGELYKELQKCKYF-SERRAATYVASLARALIYCHGKHV 137
L G + ++L Y G+L ++ + + + + +A+ + + K
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 213
Query: 138 IHRDIKPENLLIGAQGELKIADFGWSVHTFNRR----RTMCGT---LDYLPPEMVESVEH 190
+HRD+ N ++ + +K+ADFG + +++ G + ++ E +++ +
Sbjct: 214 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 273
Query: 191 DANVDIWSLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQ 227
D+WS GVL +E + G PP+ D ++Q
Sbjct: 274 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 311
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 32/242 (13%)
Query: 16 NDFDIGKPLGRGKFGHVYLAR-----EKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
N GK LG G FG V A + + VA+K+L K ++ E L E+++
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML-KPSAHLTERE-ALMSELKVL 103
Query: 71 SHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK------CKYFS--------- 114
S+L H NI+ L G +I EY G+L L++ C S
Sbjct: 104 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 163
Query: 115 ---ERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRR 171
++ +A+ + + K+ IHRD+ N+L+ KI DFG + N
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 223
Query: 172 TMCGTLDYLP-----PEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRI 225
+ LP PE + + + D+WS G+ +E F G P+ + ++
Sbjct: 224 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 283
Query: 226 VQ 227
++
Sbjct: 284 IK 285
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 32/242 (13%)
Query: 16 NDFDIGKPLGRGKFGHVYLAR-----EKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQ 70
N GK LG G FG V A + + VA+K+L K ++ E L E+++
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML-KPSAHLTERE-ALMSELKVL 98
Query: 71 SHL-RHPNILRLYGYFYDQKRVYLILEYAAKGELYKELQK------CKYFS--------- 114
S+L H NI+ L G +I EY G+L L++ C S
Sbjct: 99 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 158
Query: 115 ---ERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRR 171
++ +A+ + + K+ IHRD+ N+L+ KI DFG + N
Sbjct: 159 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 218
Query: 172 TMCGTLDYLP-----PEMVESVEHDANVDIWSLGVLCYE-FLYGVPPFEAKEHSDTYRRI 225
+ LP PE + + + D+WS G+ +E F G P+ + ++
Sbjct: 219 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 278
Query: 226 VQ 227
++
Sbjct: 279 IK 280
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 17/218 (7%)
Query: 24 LGRGKFGHVY----LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
+GRG FG VY L + + H A+K L +++ Q E I HPN+L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 80 RLYGY-FYDQKRVYLILEYAAKGELYKELQKCKYF-SERRAATYVASLARALIYCHGKHV 137
L G + ++L Y G+L ++ + + + + +A+ + + K
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 154
Query: 138 IHRDIKPENLLIGAQGELKIADFGWSVHTFNRR----RTMCGT---LDYLPPEMVESVEH 190
+HRD+ N ++ + +K+ADFG + +++ G + ++ E +++ +
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 191 DANVDIWSLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQ 227
D+WS GVL +E + G PP+ D ++Q
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 252
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 17/218 (7%)
Query: 24 LGRGKFGHVY----LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
+GRG FG VY L + + H A+K L +++ Q E I HPN+L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 80 RLYGY-FYDQKRVYLILEYAAKGELYKELQKCKYF-SERRAATYVASLARALIYCHGKHV 137
L G + ++L Y G+L ++ + + + + +A+ + + K
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 159
Query: 138 IHRDIKPENLLIGAQGELKIADFGWSVHTFNRR----RTMCGT---LDYLPPEMVESVEH 190
+HRD+ N ++ + +K+ADFG + +++ G + ++ E +++ +
Sbjct: 160 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 219
Query: 191 DANVDIWSLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQ 227
D+WS GVL +E + G PP+ D ++Q
Sbjct: 220 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 257
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 17/218 (7%)
Query: 24 LGRGKFGHVY----LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
+GRG FG VY L + + H A+K L +++ Q E I HPN+L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 80 RLYGY-FYDQKRVYLILEYAAKGELYKELQKCKYF-SERRAATYVASLARALIYCHGKHV 137
L G + ++L Y G+L ++ + + + + +A+ + + K
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 154
Query: 138 IHRDIKPENLLIGAQGELKIADFGWSVHTFNRR----RTMCGT---LDYLPPEMVESVEH 190
+HRD+ N ++ + +K+ADFG + +++ G + ++ E +++ +
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 191 DANVDIWSLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQ 227
D+WS GVL +E + G PP+ D ++Q
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 252
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 17/218 (7%)
Query: 24 LGRGKFGHVY----LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
+GRG FG VY L + + H A+K L +++ Q E I HPN+L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 80 RLYGY-FYDQKRVYLILEYAAKGELYKELQKCKYF-SERRAATYVASLARALIYCHGKHV 137
L G + ++L Y G+L ++ + + + + +A+ + + K
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 152
Query: 138 IHRDIKPENLLIGAQGELKIADFGWSVHTFNRR----RTMCGT---LDYLPPEMVESVEH 190
+HRD+ N ++ + +K+ADFG + +++ G + ++ E +++ +
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 212
Query: 191 DANVDIWSLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQ 227
D+WS GVL +E + G PP+ D ++Q
Sbjct: 213 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 250
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 17/218 (7%)
Query: 24 LGRGKFGHVY----LAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNIL 79
+GRG FG VY L + + H A+K L +++ Q E I HPN+L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIH-CAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 80 RLYGY-FYDQKRVYLILEYAAKGELYKELQKCKYF-SERRAATYVASLARALIYCHGKHV 137
L G + ++L Y G+L ++ + + + + +A+ + + K
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 155
Query: 138 IHRDIKPENLLIGAQGELKIADFGWSVHTFNRR----RTMCGT---LDYLPPEMVESVEH 190
+HRD+ N ++ + +K+ADFG + +++ G + ++ E +++ +
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 215
Query: 191 DANVDIWSLGVLCYEFLY-GVPPFEAKEHSDTYRRIVQ 227
D+WS GVL +E + G PP+ D ++Q
Sbjct: 216 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 253
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,571,565
Number of Sequences: 62578
Number of extensions: 341120
Number of successful extensions: 4134
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 601
Number of HSP's gapped (non-prelim): 1330
length of query: 281
length of database: 14,973,337
effective HSP length: 98
effective length of query: 183
effective length of database: 8,840,693
effective search space: 1617846819
effective search space used: 1617846819
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)