Your job contains 1 sequence.
>038250
MILSWKRLRGGRGRRAGKKQPGVESGGEMELTTPNHFRCPISLDLMKDPVTLSTGITYDR
ENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTIRRMIQDWCVENRSYGIERIPTPRIPVS
SVEVFEINCNITTACKSEDQAGCRDLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETF
SKTCLDENVSVLEEILSTLTLLFPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLV
LREIVSSDHRKVNVLLDIEGAIEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQ
KFVDMGLVSLLLEMLVDAQRSLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRV
SDLATEFAVSILWKLCKNEEREEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLK
LLNPHRARLECIDSMDFKDLKRPF
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038250
(444 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 971 9.4e-98 1
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 749 3.1e-74 1
TAIR|locus:2075457 - symbol:AT3G02840 species:3702 "Arabi... 728 5.3e-72 1
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 342 5.4e-55 2
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 540 4.4e-52 1
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 537 9.2e-52 1
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 531 4.0e-51 1
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 389 4.4e-36 1
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 378 6.5e-35 1
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 368 7.4e-34 1
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 213 4.2e-30 2
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 327 1.2e-28 1
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 315 1.9e-27 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 303 6.1e-25 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 295 6.9e-24 1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 291 2.7e-23 1
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 272 4.7e-21 1
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 249 3.2e-18 1
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 248 4.1e-18 1
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 194 2.2e-17 3
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 234 1.3e-16 1
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 172 1.4e-15 2
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 224 2.0e-15 1
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 222 3.1e-15 1
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 218 3.5e-15 1
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 214 1.1e-14 1
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 216 1.5e-14 1
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 209 2.0e-14 1
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 211 2.3e-14 1
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 208 5.1e-14 1
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 167 8.2e-14 2
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 210 8.5e-14 1
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 209 1.1e-13 1
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 203 5.2e-13 1
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 170 4.6e-12 2
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 178 3.7e-11 1
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 176 1.9e-10 1
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 165 3.6e-09 1
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 160 1.3e-08 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 160 1.3e-08 1
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 159 2.3e-08 1
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 155 3.4e-08 1
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 158 5.0e-08 1
TAIR|locus:2176177 - symbol:AT5G51270 species:3702 "Arabi... 158 5.1e-08 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 152 1.0e-07 1
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 152 1.0e-07 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 152 1.0e-07 1
TAIR|locus:2047605 - symbol:AT2G19410 species:3702 "Arabi... 155 1.1e-07 1
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 111 1.4e-07 2
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 150 1.7e-07 1
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 153 1.8e-07 1
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 151 2.9e-07 1
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 146 4.9e-07 1
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 142 1.1e-06 1
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 142 1.3e-06 1
TAIR|locus:2117343 - symbol:AT4G25160 species:3702 "Arabi... 144 1.8e-06 1
UNIPROTKB|H3BTA3 - symbol:STUB1 "E3 ubiquitin-protein lig... 116 3.0e-06 1
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 136 3.5e-06 1
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 140 4.7e-06 1
WB|WBGene00000500 - symbol:chn-1 species:6239 "Caenorhabd... 131 6.4e-06 1
TAIR|locus:2151641 - symbol:AT5G61560 species:3702 "Arabi... 136 1.3e-05 1
TAIR|locus:2198180 - symbol:AT1G01670 species:3702 "Arabi... 131 1.4e-05 1
TAIR|locus:2050669 - symbol:AT2G45910 species:3702 "Arabi... 134 2.2e-05 1
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 128 2.8e-05 1
UNIPROTKB|Q0DR28 - symbol:PUB57 "U-box domain-containing ... 129 4.1e-05 1
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi... 88 9.0e-05 2
UNIPROTKB|J9NRV4 - symbol:STUB1 "Uncharacterized protein"... 116 0.00022 1
UNIPROTKB|F1P105 - symbol:STUB1 "STIP1 homology and U box... 116 0.00028 1
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 90 0.00029 2
FB|FBgn0027052 - symbol:CHIP "CHIP" species:7227 "Drosoph... 117 0.00031 1
ZFIN|ZDB-GENE-030131-2963 - symbol:stub1 "STIP1 homology ... 116 0.00039 1
UNIPROTKB|F1MUH4 - symbol:STUB1 "Uncharacterized protein"... 116 0.00044 1
UNIPROTKB|Q9UNE7 - symbol:STUB1 "E3 ubiquitin-protein lig... 116 0.00044 1
UNIPROTKB|F1RG35 - symbol:STUB1 "Uncharacterized protein"... 116 0.00044 1
MGI|MGI:1891731 - symbol:Stub1 "STIP1 homology and U-Box ... 116 0.00044 1
RGD|1306167 - symbol:Stub1 "STIP1 homology and U-box cont... 116 0.00044 1
UNIPROTKB|Q5ZHY5 - symbol:STUB1 "STIP1 homology and U box... 116 0.00047 1
UNIPROTKB|E1B7G3 - symbol:STUB1 "Uncharacterized protein"... 116 0.00049 1
TAIR|locus:2204700 - symbol:AT1G77460 "AT1G77460" species... 126 0.00049 1
DICTYBASE|DDB_G0293212 - symbol:DDB_G0293212 species:4468... 121 0.00059 1
ASPGD|ASPL0000001660 - symbol:AN5906 species:162425 "Emer... 113 0.00089 1
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 971 (346.9 bits), Expect = 9.4e-98, P = 9.4e-98
Identities = 198/426 (46%), Positives = 296/426 (69%)
Query: 24 ESGGEMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLT 83
ES E E+T P F+CPIS+DLMKDPV +STGITYDR +IE WI+ GN TCPVTN VLT
Sbjct: 22 ESEPESEITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINS-GNKTCPVTNTVLT 80
Query: 84 SFEPIPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAGC 143
+F+ IPNHTIR+MIQ WCVE S I+RIPTPR+P+ EV+EI+ +++A + D C
Sbjct: 81 TFDQIPNHTIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKC 140
Query: 144 RDLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVS-VLEEILSTLTLL 202
++ KIKK ES++N++C+ +N VL + F+ FS DE ++ +L EILS LT +
Sbjct: 141 GVIIEKIKKLGDESEKNRKCVNENSVGWVLCDCFDKFSG---DEKLTFMLNEILSLLTWM 197
Query: 203 FPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAI 262
FP+ EG++ L SA+S RC+ LKS D S R+NA +++EI+S D +V+ G
Sbjct: 198 FPIGLEGISKLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVENGVA 257
Query: 263 EPLFKLIKEPICPTATKASLVVVYRTITSASATEKP--IQKFVDMGLVSLLLEMLVDAQR 320
E L KLI++ + ++TK+SL+ +Y+ + +KP +F+++GLVS+ +EM+VDA+
Sbjct: 258 EALVKLIRDSVSSSSTKSSLIAIYQMVL-----QKPEIASEFLEIGLVSITVEMIVDAEN 312
Query: 321 SLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKNEE 380
S+CEKAL+VLD +C +++GR + N+L+ P++VKKI +VS+LAT ++S++ KL K
Sbjct: 313 SVCEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKTGN 372
Query: 381 REEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLNPHRARL-ECIDSM-DFK 438
A +A+++GAFQK+LL+LQVG ++TKE +ELLK++N + +C+DS+ +FK
Sbjct: 373 T---VAVEDAVRLGAFQKVLLVLQVGYGEETKEKATELLKMMNTQMKLMSDCVDSLKEFK 429
Query: 439 DLKRPF 444
+K+PF
Sbjct: 430 YIKKPF 435
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 168/421 (39%), Positives = 256/421 (60%)
Query: 28 EMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEP 87
E+E+T P+ F+CPIS +LMKDPV +++GITYDRENIEKW E G TCPVTN VLTS E
Sbjct: 28 EVEITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWF-ESGYQTCPVTNTVLTSLEQ 86
Query: 88 IPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAGCRDLV 147
IPNHTIRRMIQ WC + GIERIPTPR+PV+S +V EI ++ A + D A C ++V
Sbjct: 87 IPNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEMV 146
Query: 148 AKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVL-EEILSTLTLLFPLA 206
K+ + KES+RN++C+ +NGA VL F+ FS+ N S+L EE +S LT + P+
Sbjct: 147 TKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENA---NASLLLEETVSVLTWMLPIG 203
Query: 207 GEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLF 266
EG + L + SS +V L++GD +NA +++E++ + V+ L I G E
Sbjct: 204 LEGQSKLTTTSSFNRLVELLRNGD----QNAAFLIKELLELNVTHVHALTKINGVQEAFM 259
Query: 267 KLI-KEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRSLCEK 325
K I ++ C SL+ ++ I + T + +F+++ LV++ +EMLVD++ S+CEK
Sbjct: 260 KSINRDSTCVN----SLISIHHMILTNQET---VSRFLELDLVNITVEMLVDSENSVCEK 312
Query: 326 ALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKNEEREE-K 384
AL+VL+ +C + GR N L+ P++VKKIL++S+ + VS++WK+CK+ + E +
Sbjct: 313 ALTVLNVICETKEGREKVRRNKLVIPILVKKILKISE--KKDLVSVMWKVCKSGDGSEVE 370
Query: 385 TAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLNPHR-ARLECIDSMDFKDLKRP 443
A L + G +K E + + K++ + S++FK +K+P
Sbjct: 371 EALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMMNKVMKMNGFVDRSYSSSIEFKHVKKP 430
Query: 444 F 444
F
Sbjct: 431 F 431
>TAIR|locus:2075457 [details] [associations]
symbol:AT3G02840 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0051707 "response to
other organism" evidence=ISS] [GO:0010193 "response to ozone"
evidence=IEP] [GO:0005634 "nucleus" evidence=IDA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0043069 "negative regulation of
programmed cell death" evidence=RCA] [GO:0050832 "defense response
to fungus" evidence=RCA] [GO:0052542 "defense response by callose
deposition" evidence=RCA] InterPro:IPR016024 GO:GO:0005634
GO:GO:0005737 EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010193 EMBL:AC018363 UniGene:At.41071
UniGene:At.48613 EMBL:BT002533 EMBL:BT008474 EMBL:AK118550
IPI:IPI00547655 RefSeq:NP_566184.1 ProteinModelPortal:Q9M8S5
STRING:Q9M8S5 EnsemblPlants:AT3G02840.1 GeneID:821225
KEGG:ath:AT3G02840 TAIR:At3g02840 OMA:RESVEGW PhylomeDB:Q9M8S5
ProtClustDB:CLSN2917076 ArrayExpress:Q9M8S5 Genevestigator:Q9M8S5
Uniprot:Q9M8S5
Length = 379
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 158/344 (45%), Positives = 228/344 (66%)
Query: 109 IERIPTPRIPVSSVEVFEINCNITTACKSEDQAGCRDLVAKIKKWTKESDRNKRCIVDNG 168
IERI +PR+ ++ + EI+ + A E+ A C ++V+KIK + D NK+C+V NG
Sbjct: 40 IERIQSPRVLLTPRDAVEISRRLQNAAAREEYAECLEIVSKIKNLGRGGDTNKKCLVQNG 99
Query: 169 AVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPL-AGEGLTYLGSASSMRCMVWFLK 227
+V L+ FE F+ D ++ +LEEIL L+ PL EG +GS +S+ C+V FL
Sbjct: 100 SVLALSSCFERFA-AARDGHMRLLEEILFVLSSWLPLNRSEGFNKMGSTASLNCLVRFLN 158
Query: 228 SGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLIKEPICPTATKASLVVVYR 287
D R+NA +RE+++ D R V L D+EGA E L K+I++ + ++TKASL+V+YR
Sbjct: 159 GKDAKTRQNAAFCIREVIAVDKRYVYALTDVEGACEGLVKIIRDSVSTSSTKASLMVIYR 218
Query: 288 TITSASATEKPIQKFVDMGLVSLLLEMLVD-AQRSLCEKALSVLDGLCSSDYGRGDAYNN 346
I+S +K +KFV +GLV L+ EM+V+ A++S+CE++L VL+ C ++ G+ D N
Sbjct: 219 AISS---NDKITEKFVKLGLVELITEMMVNNAEKSVCERSLVVLNATCDNEQGKEDVLRN 275
Query: 347 SLIFPVIVKKILRVSDLATEFAVSILWKLCKNEEREE--KTAFAEALQVGAFQKLLLLLQ 404
+LI P++VKKILRVSDLAT+ +VSILWKL KN++ E EALQVGAF+KLL+LLQ
Sbjct: 276 ALIVPLLVKKILRVSDLATQCSVSILWKLWKNKKDGECDDRLLVEALQVGAFEKLLVLLQ 335
Query: 405 VGCADKTKEHVSELLKLLNPHRARLE---CIDS-MDFKDLKRPF 444
VGC DKTKE SELL+ LN R +E C+DS M K++K+ F
Sbjct: 336 VGCEDKTKEKASELLRNLNRCRNEIEKTNCVDSSMHLKNVKKSF 379
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 342 (125.4 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
Identities = 67/159 (42%), Positives = 102/159 (64%)
Query: 28 EMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEP 87
+ E+ P+ F CPISLD+MKDPV +STGITYDRE+IEKW+ +CPVT +V+T +
Sbjct: 2 DQEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDL 61
Query: 88 IPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSE-DQAGCRDL 146
PNHT+RR+IQ WC N SYGIERIPTP+ P+ E+ ++ I + S +Q C
Sbjct: 62 TPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKL---IKESSSSHLNQVKC--- 115
Query: 147 VAKIKKWTKESDRNKRCI----VDNGAVSVLAEAFETFS 181
+ ++++ E+ NKRC+ V ++++ + +T++
Sbjct: 116 LKRLRQIVSENTTNKRCLEAAEVPEFLANIVSNSVDTYN 154
Score = 243 (90.6 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
Identities = 77/256 (30%), Positives = 136/256 (53%)
Query: 171 SVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLAGEGLTYLGSASSMRCMVWFLKSGD 230
++L F++ S++ +DE +SVL + ++ T L L L + ++ + ++ G
Sbjct: 172 NMLENRFDS-SRSLMDEALSVLYHLDTSETALKSL----LNNKKGTNLVKTLTKIMQRGI 226
Query: 231 LSRRRNAVLVLREIVS-SDHRKVNVLLDIEGAIEPLFKLIKEPICPTATKASLVVVYRTI 289
R A L+L++++ +D ++ +LL+ E + +++ + I AT++++ ++ I
Sbjct: 227 YESRAYAALLLKKLLEVADPMQI-ILLERE-LFGEVIQILHDQISHKATRSAMQIL--VI 282
Query: 290 TSASATEKPIQKFVDMGLVSLLLEMLVD----AQRSLCEKALSVLDGLCSSDYGRGDAYN 345
T + K V+ G +S+++E+L+D ++R E A+ VLD LC GR + N
Sbjct: 283 TCPWGRNR--HKAVEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLN 340
Query: 346 NSLIFPVIVKKILRVSDLATEFAVSILWKLCKNEEREEKTAFAEALQVGAFQKLLLLLQV 405
+ V+ KKILRVS + +E AV +L L + E LQ+G KL L+LQV
Sbjct: 341 HGAAIAVVSKKILRVSQITSERAVRVL--LSVGRFCATPSLLQEMLQLGVVAKLCLVLQV 398
Query: 406 GCADKTKEHVSELLKL 421
C +KTKE ELLKL
Sbjct: 399 SCGNKTKEKAKELLKL 414
Score = 57 (25.1 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
Identities = 26/93 (27%), Positives = 43/93 (46%)
Query: 309 SLLLEMLVDAQRSLCEKALSVLDGLCSSDYGRGDAYNNSL---IFPVIVKKILRVSDLAT 365
S +LE D+ RSL ++ALSVL L +S+ NN + + K + R +
Sbjct: 171 SNMLENRFDSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESR 230
Query: 366 EFAVSILWKLCKNEERE-----EKTAFAEALQV 393
+A +L KL + + E+ F E +Q+
Sbjct: 231 AYAALLLKKLLEVADPMQIILLERELFGEVIQI 263
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 142/405 (35%), Positives = 220/405 (54%)
Query: 25 SGGEM--ELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVL 82
SGG M E+ P F CPISL++MKDPV +STGITYDR++IEKW+ +CPVT + +
Sbjct: 2 SGGIMDEEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDI 61
Query: 83 TSFEPIPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAG 142
T + PNHT+RR+IQ WC N SYG+ERIPTPR P+ E+ ++ + +A E+Q
Sbjct: 62 TDADLTPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRD--SASSHENQVK 119
Query: 143 CRDLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSK--TCLDENVSVLEEILSTLT 200
C + ++++ E+ NKRC+ G LA S+ + DE +++L + ++ T
Sbjct: 120 C---LKRLRQIVSENATNKRCLEAAGVPEFLANIVSNDSENGSLTDEALNLLYHLETSET 176
Query: 201 LLFPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEG 260
+L L L + ++ + ++ G R A L+L+ I+ ++ L E
Sbjct: 177 VLKNL----LNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEV 232
Query: 261 AIEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVD--- 317
E + +++ + I ATKA++ + + + + K V+ G++S+++E+L+D
Sbjct: 233 FTE-VVQILDDRISQKATKAAMHI----LVNICPWGRNRHKAVEAGVISVIIELLMDESF 287
Query: 318 -AQRSLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLC 376
++R E A+ VLD LC GR + N+ V+ KKILRVS A++ AV +L L
Sbjct: 288 TSERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVL--LS 345
Query: 377 KNEEREEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKL 421
E LQ+G KL L+LQV C KTKE ELLKL
Sbjct: 346 VGRFCATPALLHEMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKL 390
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 134/402 (33%), Positives = 216/402 (53%)
Query: 28 EMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEP 87
++ + P HFRCPISL+LM+DPVT+ TG TYDR +IE W+ N TCPVT L+ F
Sbjct: 9 DLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTL 68
Query: 88 IPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAGCRDL- 146
IPNHT+RR+IQ+WCV NRS G+ERIPTP+ P V + + + R
Sbjct: 69 IPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAA 128
Query: 147 VAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLA 206
+ +++ + ++SD+N+ I + A +L + FS+T E VS E L+ L +L P+
Sbjct: 129 LRRLRGFARDSDKNRVLIAAHNATEILIKIL--FSETTSSELVS---ESLALLVML-PIT 182
Query: 207 --GEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNV---LLDIEGA 261
+ ++ + + L + R NA ++ EIVS+ + ++ + + E
Sbjct: 183 EPNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALI-EIVSTGTKSADLKGSISNSESV 241
Query: 262 IEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLV-DAQR 320
E + L++ PI +++ +L + +T+ + + + + G +L++ L D R
Sbjct: 242 FEGVLDLLRNPI---SSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDR 298
Query: 321 SLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKNEE 380
E+AL+ ++ LC + G ++L P++VK ILRVSD ATE+A L LC EE
Sbjct: 299 CDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCTAEE 358
Query: 381 REEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLL 422
R + EA G +LLL++Q C ++ K+ +LLKLL
Sbjct: 359 RWRE----EAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLL 396
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 140/416 (33%), Positives = 210/416 (50%)
Query: 28 EMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEP 87
++ + P HFRCPISLDLM DPVT+STG TYDR +I+ WI GN TCPVT L+ F
Sbjct: 9 DLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAM-GNTTCPVTRVALSDFTL 67
Query: 88 IPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAGCRDL- 146
IPNHT+RR+IQ+WCV NRS G+ERIPTP+ P + V + + + R
Sbjct: 68 IPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAA 127
Query: 147 VAKIKKWTKESDRNKRCIVDNGAVSVLAEA-FETFSKTCLDENVSVLEEILSTLTLLFPL 205
+ +++ ++S++N+ I + A +L F T L + + E L+ L LL
Sbjct: 128 IRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSEL--VSESLALLVLLHMT 185
Query: 206 AGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGA---I 262
E S + M L + R NA ++ E+V + + +++ L I G+
Sbjct: 186 ETECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALI-EMVLTGAKSMDLKLIISGSDSIF 244
Query: 263 EPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLV-DAQRS 321
E + L+K PI +++ +L + + I + ++ + G +L++ L D R
Sbjct: 245 EGVLDLLKNPI---SSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRC 301
Query: 322 LCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKNEER 381
E+ L+ ++ LC G ++L P++VK ILRVSD ATE+A L LC EER
Sbjct: 302 DTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCTAEER 361
Query: 382 EEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLNPHRARLECIDSMDF 437
EA G +LLLL+Q C ++ K LLKLL + S DF
Sbjct: 362 CRD----EAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTVHSDDF 413
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 119/400 (29%), Positives = 204/400 (51%)
Query: 32 TTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNH 91
T P F+CPISLD+MK PV+LSTG+TYDR +I++W+ +DGN TCP T ++L + E +PN
Sbjct: 10 TVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWL-DDGNNTCPATMQILQNKEFVPNL 68
Query: 92 TIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVF-EINCNITTACKSEDQAGCRDLVAKI 150
T+ R+I W S I R P S EIN I + E+ A +KI
Sbjct: 69 TLHRLIDHW-----SDSINRRADSESPESDTPTRDEINAAIERF-RIENDAR-----SKI 117
Query: 151 KKWTKESDRNKRCIVD-NGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLAGEG 209
++ +ESD N+ + + V++L + S+ D + ++ E + L+++ +
Sbjct: 118 LRFARESDENREFLAGKDDFVAMLVDLISD-SRNFSDSQLLLVGEAVKILSMIRRKIFDR 176
Query: 210 --LTYLGSASSMRCMVWF---LKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEP 264
L+ L + C+ F +K G+ + + VL E ++ D ++ EG +
Sbjct: 177 RRLSNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVL-EFIAVDAESKLIIAKGEGLVTE 235
Query: 265 LFKLIKEPICPTATKASLVVVYRTITSASATEKPIQ-KFVDMGLVSLLLEMLVDAQRSLC 323
+ KLI + +SL+ ++ A A+ K ++ + LV+ L +L D S+
Sbjct: 236 IIKLISSD-----SDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTSVS 290
Query: 324 --EKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKNEER 381
EK L +L+ + S GR + + + +V K+++VS ATE AV++LW +C +
Sbjct: 291 VTEKCLKLLEAISSCKEGRSEICDGVCV-ETVVNKLMKVSTAATEHAVTVLWSVCYLFK- 348
Query: 382 EEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKL 421
EK A +++ K+LLLLQ C+ + +++LLK+
Sbjct: 349 -EKKAQDAVIRINGVTKILLLLQSNCSLTVRHMLTDLLKV 387
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 118/417 (28%), Positives = 211/417 (50%)
Query: 31 LTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPN 90
+T P FRCPISLD+MK PV+L TG+TYDR +I++W+ + GN TCP T ++L + + IPN
Sbjct: 8 ITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWL-DGGNNTCPATMQILQNKDFIPN 66
Query: 91 HTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAGCRDLVAKI 150
T++R+I+ W R R +++ EI I +++ R++++KI
Sbjct: 67 RTLQRLIEIWSDSVR----RRTCVESAELAAPTRDEIADAIDRVKIEKEERDDREVLSKI 122
Query: 151 KKWTKESDRNKRCIVD-NGAVSVLAEAFET--FSKTCLDENVSVLE--EILSTLTLLFP- 204
++ +ESD N+ + + V +L + F T +++ V E +ILST+
Sbjct: 123 VRFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILSTIRSKVSD 182
Query: 205 -LAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIE 263
L + +V+ K+G++ + + +L E ++ D ++ + +G I
Sbjct: 183 RRRFSNLILTNGRDRLSVIVYLFKTGNVELKIDCAGLL-EFIAVDAESKLLIAERDGLIT 241
Query: 264 PLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLL-EMLVDAQRSL 322
L K I + + ++SL + I+S + + + +G V+ LL + S+
Sbjct: 242 ELMKSISKDSDLSLIESSLSCLI-AISSPKRVKLNLLREKLIGDVTKLLSDSTSSLSVSV 300
Query: 323 CEKALSVLDGLCSSDYGRGDAYN-NSLIFPVIVKKILRVSDLATEFAVSILWKLCKNEER 381
EK L +L+ L S+ GR + + +VKK+++VS ATE AV++LW + +
Sbjct: 301 TEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAATEHAVTVLWSV-SYLFK 359
Query: 382 EEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLNPHRARLECIDSMDFK 438
E+K A V K+LLLLQ C+ + +++LLK+ + +R C+ + D K
Sbjct: 360 EDK-ALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLKVFKVN-SR-SCLSAYDTK 413
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 120/421 (28%), Positives = 210/421 (49%)
Query: 28 EMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEP 87
E +T P+ F+CPISLD+M+ PV+L TG+TYDR +I++W+ + GN TCP T ++L + +
Sbjct: 7 ETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWL-DGGNNTCPATMQLLKTKDF 65
Query: 88 IPNHTIRRMIQDWC--VENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAGCRD 145
+PN T++R+I W + R G + P E+N + E+
Sbjct: 66 VPNLTLQRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERLMSLEN------ 119
Query: 146 LVAKIKKWTKESDRNKRCIVDNGA-VSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFP 204
+ KI ++ K+SD N+ + V +L + T KT + E V + IL ++ +
Sbjct: 120 -LMKIVRFVKDSDSNREFLSKKMEFVPMLVDIIRT-KKTKI-ELVIMAIRILDSIKVDRE 176
Query: 205 LAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEP 264
+ + ++ ++ G+L + +V VL + +S D + ++ + +G +
Sbjct: 177 RLSNLMLANDGGDCLTAILLAIQRGNLESKIESVRVL-DWISFDAKSKLMIAERDGVLTE 235
Query: 265 LFKLIK--EPICPTATKASL---VVVYRT--ITSASATEKPIQKFVDMGLVSLLLEMLVD 317
+ K I E P+ +ASL + + ++ + S K I K D+ LL E L +
Sbjct: 236 MMKSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDI----LLTETLTN 291
Query: 318 AQRSLCEKALSVLDGLCSSDYGR----GDAYNNSLIFPVIVKKILRVSDLATEFAVSILW 373
++ EK+L +L+ L S GR GD +N +VKK+L+VS ATE AV+ILW
Sbjct: 292 V--AVTEKSLKLLETLSSKREGRLEICGD--DNGRCVEGVVKKLLKVSTTATEHAVTILW 347
Query: 374 KLCKNEEREEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLNPHRARLECID 433
LC RE+KT + KLL+++Q C+ ++ +L+K+L + + L +
Sbjct: 348 CLCY-VFREDKTVEETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKVLKFNSSALAAYE 406
Query: 434 S 434
+
Sbjct: 407 T 407
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 213 (80.0 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 72/265 (27%), Positives = 122/265 (46%)
Query: 161 KRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLAGEGLTYLGSASSMR 220
K+ +VD G V V++ F+ +V E ++ L L L + L + +
Sbjct: 178 KKTVVDEGGVFVISSLLSPFTSH------AVGSEAIAILVNL-ELDSDSKAGLMQPARVS 230
Query: 221 CMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLIKEPICPTATKA 280
MV L G + + N ++ +V + L+ + L +L+K+
Sbjct: 231 LMVDMLNDGSIETKINCARLIGRLVEEKGFRAE-LVSSHSLLVGLMRLVKDRRRRNGVSP 289
Query: 281 SLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRSLCEKALSVLDGLCSSDYGR 340
+L + + S S ++ V +G V L+++L E AL VLD LC GR
Sbjct: 290 ALTL----LKSVSVHKQVRNLLVRIGAVPQLVDVLPCLDVECLESALFVLDSLCLESEGR 345
Query: 341 GDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKNEEREEKTAFAEALQVGAFQKLL 400
++ P V+ +++VS+ T +A+SILW +CK EE ++ A ++VG KLL
Sbjct: 346 IALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVCKLAS-EECSSLA--VEVGLAAKLL 402
Query: 401 LLLQVGCADKTKEHVSELLKLLNPH 425
L++Q GC K+ +ELLKL + H
Sbjct: 403 LVIQSGCDPALKQRSAELLKLCSLH 427
Score = 188 (71.2 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 52/167 (31%), Positives = 89/167 (53%)
Query: 28 EMELTT-PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFE 86
E+EL P+ F CPISL+ M+DPVTL TG TY+R NI KW + G+ TCP T + L
Sbjct: 54 ELELPEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNI-GHCTCPTTMQELWDDL 112
Query: 87 PIPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAGCRDL 146
PN T+ ++I W ++ Y + + + + ++E+ + T K++ +A L
Sbjct: 113 VTPNKTLHQLIYTWF--SQKYVLMKKRSEDVQGRAIEI------LGTLRKAKGKAKVHAL 164
Query: 147 VAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCL-DENVSVL 192
+++K+ K+ +VD G V V++ F+ + E +++L
Sbjct: 165 -SELKQVVMAHAIAKKTVVDEGGVFVISSLLSPFTSHAVGSEAIAIL 210
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 327 (120.2 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 102/361 (28%), Positives = 171/361 (47%)
Query: 23 VESGGEME-LTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRV 81
++S G+ +T P+ FRCPISL+LMKDPV +STG TY+R IEKWI G+ TCP T +
Sbjct: 262 LDSNGDSRPITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWI-ASGHHTCPTTQQK 320
Query: 82 LTSFEPIPNHTIRRMIQDWCVENRSYGIERIPTPRIPV---SSVEVFEINCNITTACKSE 138
+++ PN+ +R +I WC N +R P P SS E I+ ++ C S
Sbjct: 321 MSTSALTPNYVLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLC-SP 379
Query: 139 DQAGCRDLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILST 198
D R A+++ K + N+ CI + GA+ +L + ++ E ++
Sbjct: 380 DTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSS-------SDLRTQEHAVTA 432
Query: 199 LTLLFPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDI 258
L L + + + S+ ++ +V LK+G + R NA L + D KV +
Sbjct: 433 L-LNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTI--GG 489
Query: 259 EGAIEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDA 318
GAI L L+ E K + ++ + I+ GLV L++ ++ +
Sbjct: 490 MGAIPALVVLLGEG-SQRGKKDAAAALFNLCIYQGNKGRAIRA----GLVPLIMGLVTNP 544
Query: 319 QRSLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKN 378
+L ++A+++L L S G+ A + PV+V+ I + E A +++ LC
Sbjct: 545 TGALMDEAMAILSILSSHPEGKA-AIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSG 603
Query: 379 E 379
E
Sbjct: 604 E 604
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 315 (115.9 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 109/406 (26%), Positives = 188/406 (46%)
Query: 31 LTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPN 90
LT P F CPISL+LMKDP +STG TY+R I++WI + GN++CP T + L +F PN
Sbjct: 241 LTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWI-DCGNLSCPKTQQKLENFTLTPN 299
Query: 91 HTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITT----ACKSEDQA--GCR 144
+ +R +I WC ++ R S +++ +++ CK Q+ R
Sbjct: 300 YVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDRR 359
Query: 145 DLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFP 204
V++I+ +K S N+ I + GA+ VL + + T EN + L L
Sbjct: 360 TAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENA-----VTCILNLSIY 414
Query: 205 LAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEP 264
+ L L A ++ +V L++G + R NA L + +D K+ ++ GAI
Sbjct: 415 EHNKELIML--AGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKI--IIGASGAIMA 470
Query: 265 LFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRS-LC 323
L L++ A+ + I + + V G+V L++ML D+ +
Sbjct: 471 LVDLLQYGSVRGKKDAATALFNLCIYQGNKG-----RAVRAGIVKPLVKMLTDSSSERMA 525
Query: 324 EKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKNEEREE 383
++AL++L L S+ + + I P ++ + + E A +IL LCK + E+
Sbjct: 526 DEALTILSVLASNQVAKTAILRANAI-PPLIDCLQKDQPRNRENAAAILLCLCKRDT-EK 583
Query: 384 KTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLNPHRARL 429
+ ++GA L+ L + G ++ K + LL+LL +L
Sbjct: 584 LISIG---RLGAVVPLMELSRDG-TERAKRKANSLLELLRKSSRKL 625
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 303 (111.7 bits), Expect = 6.1e-25, P = 6.1e-25
Identities = 107/360 (29%), Positives = 170/360 (47%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P +FRCPISL+LMKDPV +STG TY+R +I+KW+ + G+ TCP + L PN+ +
Sbjct: 249 PEYFRCPISLELMKDPVIVSTGQTYERSSIQKWL-DAGHKTCPKSQETLLHAGLTPNYVL 307
Query: 94 RRMIQDWCVENRSYGIERIP-------TPRIPVSSVE----VFEINCNITTACKSEDQAG 142
+ +I WC N GIE +P T +I SS F ++ A + +Q
Sbjct: 308 KSLIALWCESN---GIE-LPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQ- 362
Query: 143 CRDLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLL 202
R +++ K + N+ CI + GA+ +L E + + +V+ L L L
Sbjct: 363 -RAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTAL------LNLS 415
Query: 203 FPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAI 262
+G + A ++ +V LK+G + R NA L + D KV + GAI
Sbjct: 416 INEGNKGA--IVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAI--GAAGAI 471
Query: 263 EPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRSL 322
+ L L++E A+ + I + + + V G+V L +L DA +
Sbjct: 472 QALISLLEEGTRRGKKDAATAIFNLCIYQGNKS-----RAVKGGIVDPLTRLLKDAGGGM 526
Query: 323 CEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLC-KNEER 381
++AL++L L ++ G+ A + PV+V+ I S E A +ILW LC N ER
Sbjct: 527 VDEALAILAILSTNQEGK-TAIAEAESIPVLVEIIRTGSPRNRENAAAILWYLCIGNIER 585
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 295 (108.9 bits), Expect = 6.9e-24, P = 6.9e-24
Identities = 105/397 (26%), Positives = 175/397 (44%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P+ FRCPISL+LM+DPV +S+G TY+R I+KW+ + G+ TCP T + L+ PN +
Sbjct: 229 PDEFRCPISLELMQDPVIVSSGQTYERSCIQKWL-DSGHKTCPKTQQPLSHTSLTPNFVL 287
Query: 94 RRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEIN-------CNITTACKSEDQAGCRDL 146
+ +I WC N GIE +P + + + + ++ +S +Q R
Sbjct: 288 KSLISQWCEAN---GIE-LPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQRAA 343
Query: 147 VAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLA 206
+I+ K + N+ CI + GA+ +L + + V+ L L +
Sbjct: 344 AGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTAL--------LNLSIH 395
Query: 207 GEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLF 266
+ + ++ +V LK+G + R NA L + D KV + GAI PL
Sbjct: 396 ENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTI--GAAGAIPPLI 453
Query: 267 KLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRSLCEKA 326
L+ + P K + ++ + ++ G+V L+ LVD + ++A
Sbjct: 454 NLLCDG-SPRGKKDAATAIFNLCIYQGNKVRAVKA----GIVIHLMNFLVDPTGGMIDEA 508
Query: 327 LSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKNEEREEKTA 386
LS+L L + G+ + I P +V+ I S E A +ILW LC + E+T
Sbjct: 509 LSLLSILAGNPEGKIVIARSEPI-PPLVEVIKTGSPRNRENAAAILWLLCSADT--EQTL 565
Query: 387 FAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLN 423
A+A V K L A + + EL+ N
Sbjct: 566 AAKAAGVEDALKELSETGTDRAKRKASSILELMHQAN 602
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 291 (107.5 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 98/354 (27%), Positives = 160/354 (45%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P+ FRCPISL++M+DPV +S+G TY+R IEKWI E G+ TCP T + LTS PN+ +
Sbjct: 257 PDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWI-EGGHSTCPKTQQALTSTTLTPNYVL 315
Query: 94 RRMIQDWCVEN--------RSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAGCRD 145
R +I WC N S ++ + P + ++ ++ + EDQ R
Sbjct: 316 RSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYG-NPEDQ---RS 371
Query: 146 LVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPL 205
+I+ K + N+ I + GA+ +L T + +V+ L L L
Sbjct: 372 AAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTAL------LNLSICE 425
Query: 206 AGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPL 265
+G + SA ++ +V LK G + R NA L + D KV + GAI PL
Sbjct: 426 NNKGA--IVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTI--GALGAIPPL 481
Query: 266 FKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRSLCEK 325
L+ E K + ++ K I+ G++ L +L + + ++
Sbjct: 482 VVLLNEGT-QRGKKDAATALFNLCIYQGNKGKAIRA----GVIPTLTRLLTEPGSGMVDE 536
Query: 326 ALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKNE 379
AL++L L S G+ ++ + P +V+ I S E A ++L LC +
Sbjct: 537 ALAILAILSSHPEGKAIIGSSDAV-PSLVEFIRTGSPRNRENAAAVLVHLCSGD 589
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 272 (100.8 bits), Expect = 4.7e-21, P = 4.7e-21
Identities = 85/292 (29%), Positives = 139/292 (47%)
Query: 24 ESGGEMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLT 83
ES +LT P F CP+SL+LMKDPV ++TG TY+R I++WI + GN+TCP T + L
Sbjct: 232 ESKKSDKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWI-DCGNLTCPKTQQKLE 290
Query: 84 SFEPIPNHTIRRMIQDWCVENRSYGIERIPTPRI---PVSSVEVFEINCNITTACKSEDQ 140
+F PN+ +R +I WC E + IE+ P I +S ++ I + S
Sbjct: 291 NFTLTPNYVLRSLISRWCAE---HNIEQ-PAGYINGRTKNSGDMSVIRA-LVQRLSSRST 345
Query: 141 AGCRDLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLT 200
R+ V++I+ +K S N+ I + GA+ VL T EN I L
Sbjct: 346 EDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLL-TSEDVATQENA-----ITCVLN 399
Query: 201 L-LFPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIE 259
L ++ E + + G+ +S+ V L++G + R NA L + +D K+ ++
Sbjct: 400 LSIYENNKELIMFAGAVTSI---VQVLRAGTMEARENAAATLFSLSLADENKI--IIGGS 454
Query: 260 GAIEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLL 311
GAI L L++ P K + ++ + ++ + LV +L
Sbjct: 455 GAIPALVDLLENGT-PRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKML 505
Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 71/282 (25%), Positives = 126/282 (44%)
Query: 144 RDLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTL-L 202
R+ V++I+ +K S N+ I + GA+ VL T EN I L L +
Sbjct: 349 RNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLL-TSEDVATQENA-----ITCVLNLSI 402
Query: 203 FPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAI 262
+ E + + G+ +S+ V L++G + R NA L + +D K+ ++ GAI
Sbjct: 403 YENNKELIMFAGAVTSI---VQVLRAGTMEARENAAATLFSLSLADENKI--IIGGSGAI 457
Query: 263 EPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRS- 321
L L++ P K + ++ + ++ G+V+ L++ML D+ R
Sbjct: 458 PALVDLLENGT-PRGKKDAATALFNLCIYHGNKGRAVRA----GIVTALVKMLSDSTRHR 512
Query: 322 LCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLAT-EFAVSILWKLCKNEE 380
+ ++AL++L L ++ + A + P ++ IL+ E A +IL LCK +
Sbjct: 513 MVDEALTILSVLANNQDAKS-AIVKANTLPALIG-ILQTDQTRNRENAAAILLSLCKRDT 570
Query: 381 REEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLL 422
EK L GA L+ L + G ++ K LL+LL
Sbjct: 571 --EKLITIGRL--GAVVPLMDLSKNG-TERGKRKAISLLELL 607
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 249 (92.7 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 98/415 (23%), Positives = 183/415 (44%)
Query: 23 VESGGEMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVL 82
+ G + + P F CPISLDLM+DPV STG TYDR +I +WI E+G+ TCP + + L
Sbjct: 287 IGGGDDTSFSVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWI-EEGHSTCPNSGQTL 345
Query: 83 TSFEPIPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAG 142
+PN +R +I WC YG++ +P E +C+ A ++ ++A
Sbjct: 346 ADHRLVPNRALRSLISQWC---GVYGLQ-YDSPESNEGMAECVAASCSSRAAMEA-NKAT 400
Query: 143 CRDLV--------------AK-IKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDE 187
R LV AK I+ K +N+ I D GA+ +L S + +
Sbjct: 401 ARILVRMLEDGSENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLL--LSNDWMAQ 458
Query: 188 NVSVLEEILSTLTLLFPLAGEGLTYLGSASSMRCMVWFLKSG-DLSRRRNAVLVLREIVS 246
+V L L++ P G + G +R +V L++G + NA L + S
Sbjct: 459 ENAVTA--LLNLSIFEPNKGRIMEQEGC---LRLIVGVLQNGWTTEAKENAAATLFSL-S 512
Query: 247 SDHRKVNVLLDIEGAIEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMG 306
H ++++ GA+E L ++ + K +++ ++ T ++ + ++
Sbjct: 513 VVHNFKKLIMNEPGAVEELASMLTKGTS-RGKKDAVMALFNLSTHPESSARMLES---CA 568
Query: 307 LVSLLLEMLVDAQRSLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATE 366
+V+L+ + D AL++L S + G ++ + +V + R + E
Sbjct: 569 VVALIQSLRNDTVSEEAAGALALLMKQPSIVHLVG---SSETVITSLVGLMRRGTPKGKE 625
Query: 367 FAVSILWKLCKNEEREEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKL 421
AVS L+++C+ R ++ ++ + + + K+ S ++K+
Sbjct: 626 NAVSALYEICR---RGGSALVQRVAKIPGLNTVIQTITLNGTKRAKKKASLIVKM 677
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 248 (92.4 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 100/387 (25%), Positives = 166/387 (42%)
Query: 27 GEMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFE 86
G+ +T P F CPISLDLM DPV +STG TYDR +I +WI E+G+ TCP T ++L
Sbjct: 299 GDTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWI-EEGHCTCPKTGQMLMDSR 357
Query: 87 PIPNHTIRRMIQDWCVENR-SYGIERIPTPR------IPV-SSVEVFEINCNITTACKSE 138
+PN ++ +I WC + SY E +P +P ++VE + +I ++
Sbjct: 358 IVPNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLAD 417
Query: 139 DQAGCRDLVAK-IKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILS 197
+ + A+ I+ K N+ I + GA+ L + EN E ++
Sbjct: 418 GSQAAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTS-------ENAIAQENSVT 470
Query: 198 TLTLLFPLAGEGLTYLGSASSMRCMVWFLKSG-DLSRRRNAVLVLREIVSSDHRKVNVLL 256
+ L + + +V L SG + + NA L + + K + +
Sbjct: 471 AMLNLSIYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAI 530
Query: 257 DIEGAIEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLV 316
++ +E L L++ P K ++ +Y T + I+ LV L V
Sbjct: 531 -VDQCVEALALLLQNGT-PRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGALKNEGV 588
Query: 317 DAQRSLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRV-SDLATEFAVSILWKL 375
A+ + AL V L + G+ D+ L+ ++R + E AV+ L +L
Sbjct: 589 -AEEAAGALALLVRQSLGAEAIGKEDSAVAGLM------GMMRCGTPRGKENAVAALLEL 641
Query: 376 CKNEERE--EKTAFAEALQVGAFQKLL 400
C++ EK A A+ G Q LL
Sbjct: 642 CRSGGAAVAEKVLRAPAI-AGLLQTLL 667
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 194 (73.4 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
Identities = 35/75 (46%), Positives = 53/75 (70%)
Query: 31 LTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPN 90
++ P +FRCP+S +LM DPV +++G T+DR +I+KW+ ++G CP T +VLT E IPN
Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWL-DNGLAVCPRTRQVLTHQELIPN 294
Query: 91 HTIRRMIQDWCVENR 105
+T++ MI W NR
Sbjct: 295 YTVKAMIASWLEANR 309
Score = 96 (38.9 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
Identities = 41/140 (29%), Positives = 62/140 (44%)
Query: 293 SATEKPIQKFVDMGLVSLLLEMLVDAQRSLCEKALSVLDGLCSSDYGRGDAYNNSLIFPV 352
S T + V V L+E+L D + +KA+++L L + GR I P+
Sbjct: 625 SITHDNKARIVQAKAVKYLVELL-DPDLEMVDKAVALLANLSAVGEGRQAIVREGGI-PL 682
Query: 353 IVKKILRVSDLATEFAVSILWKLCKNEEREEKTAFAE-ALQVGAFQKLLLLLQVGCADKT 411
+V+ + S E A S+L +LC N + F LQ GA L+ L Q G +
Sbjct: 683 LVETVDLGSQRGKENAASVLLQLCLNSPK-----FCTLVLQEGAIPPLVALSQSG-TQRA 736
Query: 412 KEHVSELLK-LLNPHRARLE 430
KE +LL N AR++
Sbjct: 737 KEKAQQLLSHFRNQRDARMK 756
Score = 71 (30.1 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 44/179 (24%), Positives = 79/179 (44%)
Query: 157 SDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLAGEGLTYLGSA 216
S+ NK IV+ GA+ L T + + + + L LS L + G+ S
Sbjct: 544 SELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFS-LSVLQVNRERIGQ------SN 596
Query: 217 SSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLIKEPICPT 276
++++ +V L G +++A L + + K ++ A++ L +L+ +P
Sbjct: 597 AAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQ--AKAVKYLVELL-DPDLEM 653
Query: 277 ATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEML-VDAQRSLCEKALSVLDGLC 334
KA + + + SA + Q V G + LL+E + + +QR E A SVL LC
Sbjct: 654 VDKAVAL-----LANLSAVGEGRQAIVREGGIPLLVETVDLGSQRGK-ENAASVLLQLC 706
Score = 61 (26.5 bits), Expect = 8.3e-14, Sum P(3) = 8.3e-14
Identities = 32/127 (25%), Positives = 55/127 (43%)
Query: 306 GLVSLLLEMLVDAQRSLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRV-SDLA 364
G ++ LL +L ++ E A++ L L S+ + I P++ +L +D A
Sbjct: 514 GAITPLLSLLYSEEKLTQEHAVTALLNLSISELNKAMIVEVGAIEPLV--HVLNTGNDRA 571
Query: 365 TEFAVSILWKLCKNEEREEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLNP 424
E + + L+ L + E+ + A A Q L+ LL G K+ S L L
Sbjct: 572 KENSAASLFSLSVLQVNRERIGQSNA----AIQALVNLLGKGTFRGKKDAASALFNLSIT 627
Query: 425 H--RARL 429
H +AR+
Sbjct: 628 HDNKARI 634
Score = 40 (19.1 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 180 FSKTCLDENVSVLEEILSTLTLLFPLAGEGLTYLGSASSMRCMV 223
F K ++ + S+ E S +F L G +Y S S C V
Sbjct: 364 FEKLKINVSASLCGESQSKDLEIFELLSPGQSYTHSRSESVCSV 407
Score = 39 (18.8 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 381 REEKTAFAEALQVG-AFQKLLLLLQVGCADKTKEHVSELLKLLNP 424
R +L+ G F+KL + + +++ E+ +LL+P
Sbjct: 348 RSSSLTSRSSLETGNGFEKLKINVSASLCGESQSKDLEIFELLSP 392
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 234 (87.4 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 69/282 (24%), Positives = 132/282 (46%)
Query: 31 LTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPN 90
L P+ F CPI+L++M DPV ++TG TY++E+I+KW + G+ TCP T + L PN
Sbjct: 288 LILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWF-DAGHKTCPKTRQELDHLSLAPN 346
Query: 91 HTIRRMIQDWCVENRSYGIERIPTPRI-PVSSVEVFEINCNITTACKSEDQAGCRDLVAK 149
++ +I WC +N +IP + P S E + + A S R V +
Sbjct: 347 FALKNLIMQWCEKNNF----KIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQ 402
Query: 150 IKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLAGEG 209
++ +E+ N+ I + GA+ +L + ++ + + EN + + L L +
Sbjct: 403 MRLLARENPENRVLIANAGAIPLLVQLL-SYPDSGIQENA-----VTTLLNLSIDEVNKK 456
Query: 210 LTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLI 269
L + + ++ ++ L++G+ R N+ L + D KV + + I PL L+
Sbjct: 457 L--ISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTI--GLSNGIPPLVDLL 512
Query: 270 KEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLL 311
+ K +L ++ +++ + I + L++LL
Sbjct: 513 QHGTL-RGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLL 553
Score = 140 (54.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 68/314 (21%), Positives = 136/314 (43%)
Query: 111 RIPTPRI-PVSSVEVFEINCNITTACKSEDQAGCRDLVAKIKKWTKESDRNKRCIVDNGA 169
+IP + P S E + + A S R V +++ +E+ N+ I + GA
Sbjct: 363 KIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLLARENPENRVLIANAGA 422
Query: 170 VSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLAGEGLTYLGSASSMRCMVWFLKSG 229
+ +L + ++ + + EN + + L L + L + + ++ ++ L++G
Sbjct: 423 IPLLVQLL-SYPDSGIQENA-----VTTLLNLSIDEVNKKL--ISNEGAIPNIIEILENG 474
Query: 230 DLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLIKEPICPTATKASLVVVYRTI 289
+ R N+ L + D KV + + I PL L++ K +L ++
Sbjct: 475 NREARENSAAALFSLSMLDENKVTI--GLSNGIPPLVDLLQHGTL-RGKKDALTALFNL- 530
Query: 290 TSASATEKPIQKFVDMGLVSLLLEMLVDAQRSLCEKALSVLDGLCSSDYGRGDAYNNSLI 349
S ++ K + +D G+V LL +L D + ++ALS+L L S GR A
Sbjct: 531 -SLNSANKG--RAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLASHPEGR-QAIGQLSF 586
Query: 350 FPVIVKKILRVSDLATEFAVSILWKLCKNEEREEKTAFAEALQVGAFQKLLLLLQVGCAD 409
+V+ I + + E A S+L +L N + ALQ G ++ L+ + G +
Sbjct: 587 IETLVEFIRQGTPKNKECATSVLLELGSNNS----SFILAALQFGVYEYLVEITTSG-TN 641
Query: 410 KTKEHVSELLKLLN 423
+ + + L++L++
Sbjct: 642 RAQRKANALIQLIS 655
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 172 (65.6 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 24 ESGGEMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLT 83
E+ E T P F+C +S +M DPV +S+G T++R I+KW E GN +CP++ R L
Sbjct: 210 EASEEHNGTLPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDE-GNDSCPISKRKLD 268
Query: 84 SFEPIPNHTIRRMIQDWCVEN 104
F PN ++ I +WC +N
Sbjct: 269 DFTLKPNVELKSQISEWCAKN 289
Score = 102 (41.0 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 57/254 (22%), Positives = 103/254 (40%)
Query: 171 SVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLAGEGLTYLGSASS--MRCMVWFLKS 228
S E T+ K L+ N + E I L LL + S + FL+S
Sbjct: 416 SKFLEPLITYLKNALERNGTAGEIIKGGLDLLLAFLSGNRRAIESLEEEVFKMFSVFLES 475
Query: 229 GDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLIKEPICPTATKASLVVVYRT 288
++ A+ +L V S+H + G++ L K+++ +A + T
Sbjct: 476 EVVAEE--ALNILE--VLSNHPHGPSKITSSGSLSSLLKIVESQAEHLQEQAMI-----T 526
Query: 289 ITSASATEKPIQKFVDMGLVSLLLEMLVDAQRSLCEKALSVLDGLCSSDYGRGDAYNNSL 348
+ + S++ + + V + + L L Q+ C+ ++ +L LCS++ GRG
Sbjct: 527 LKNLSSSMEICLEMVSLDFIQKLTSFL--QQKVFCKHSIIILKNLCSTEKGRGCITETPD 584
Query: 349 IFPVIVKKILRVSDLATEFAVSILWKLCKNEEREEKTAFAEALQVGAFQKLLLLLQVGCA 408
I + + E A+SIL +LC + EA + + L+L+ G
Sbjct: 585 CLASIAELLESNVPEEQENAISILLQLCVQKIEYCCLVVREATDI--YSSLILISNNG-T 641
Query: 409 DKTKEHVSELLKLL 422
++ K SELL+ L
Sbjct: 642 EEVKVSASELLRAL 655
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 224 (83.9 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 103/403 (25%), Positives = 172/403 (42%)
Query: 39 CPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTIRRMIQ 98
CPISL++M DPV + TG TYDR +I KW GNITCP+T ++LTS E + N ++R++I+
Sbjct: 294 CPISLEIMTDPVVIETGHTYDRSSITKWFGS-GNITCPITGKILTSTELVDNVSVRQVIR 352
Query: 99 DWCVENRSY--GIERIPTPRIPV--SSVEVFEINCNITTACKSEDQAGCRDL----VAKI 150
C N GI R V S+ I SE G ++ V +I
Sbjct: 353 KHCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEEMIYRAVREI 412
Query: 151 KKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLAGEGL 210
+ TK S N+ C+V GAV+ L + + + ++ + + +T +AGEGL
Sbjct: 413 RVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLSKHVTGKSKIAGEGL 472
Query: 211 TYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLIK 270
+ +V L G + R +SS ++ + AI L ++K
Sbjct: 473 ---------KILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVK 523
Query: 271 EPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRS--LCEKALS 328
+ K S ++ + S + + G V +LL++L + S L L+
Sbjct: 524 GDDYGDSAKRSALLAVMGLLMQSDNH---WRVLAAGAVPILLDLLRSGEISGGLTADCLA 580
Query: 329 VLDGLCSSDYGR-GDAYNNSLIFPVIVKKILRVSDLAT-EFAVSILWKLCKNEEREEKTA 386
L L G G L V + S +A + V ++ LC N R+
Sbjct: 581 TLAKLAEYPDGTIGVIRRGGLKLAVKILSSSEDSPVAVKQHCVGLILNLCLNGGRDVVGV 640
Query: 387 FAE-ALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLNPHRAR 428
+ +L +G+ +L + G + K S L+++++ + R
Sbjct: 641 LVKNSLVMGSLYTVLSNGEYGGSKKA----SALIRMIHEFQER 679
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 222 (83.2 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 80/307 (26%), Positives = 148/307 (48%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P FRCPI+L+LM+DPV ++TG TYDRE+I+ WI + G+ TCP T +VL +PN +
Sbjct: 275 PADFRCPITLELMRDPVVVATGQTYDRESIDLWI-QSGHNTCPKTGQVLKHTSLVPNRAL 333
Query: 94 RRMIQDWCVENRS----YGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAGCRDLVAK 149
+ +I WC + + YG + P +VE ++ ++ + A +V +
Sbjct: 334 KNLIVLWCRDQKIPFELYG-DGGGEPAPCKEAVEFTKMM--VSFLIEKLSVADSNGVVFE 390
Query: 150 IKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLAGEG 209
++ K + CI + GA+ L T C ++ + IL+ L++L
Sbjct: 391 LRALAKSDTVARACIAEAGAIPKLVRYLAT---ECPSLQINAVTTILN-LSIL---EQNK 443
Query: 210 LTYLGSASSMRCMVWFLKSGDL-SRRRNAVLVLREI--VSSDHRKVNVLLDIEGAIEPLF 266
+ + ++ ++ L+SG + NA L + VS+ R++ + + L
Sbjct: 444 TRIMETDGALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARV---VSGLV 500
Query: 267 KLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRSLCEKA 326
L K+ PT++K +V I + A + + +FV+ G++ DA + L E+A
Sbjct: 501 DLAKQG--PTSSKRDALVA---ILNLVAERENVGRFVEAGVMGAA----GDAFQELPEEA 551
Query: 327 LSVLDGL 333
++V++ +
Sbjct: 552 VAVVEAV 558
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 218 (81.8 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 78/293 (26%), Positives = 137/293 (46%)
Query: 133 TACKSEDQAGCRDLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVL 192
T K++ QA L +++K+ ++ +V+ G VSV++ F+ +V
Sbjct: 155 TLKKAKGQARVHAL-SELKQIVIAHLMARKTVVEEGGVSVISSLLGPFTSH------AVG 207
Query: 193 EEILSTLTLLFPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKV 252
E+++ L L L + + L + + +V L G + N ++R +V +
Sbjct: 208 SEVVAILVSL-DLDSDSKSGLMQPAKVSLIVDMLNDGSNETKINCARLIRGLVEEKGFRA 266
Query: 253 NVLLDIEGAIEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLL 312
L+ + L +L+K+ +L R + S ++ V +G V L+
Sbjct: 267 E-LVSSHSLLVGLMRLVKDKRHRNGVSPAL----RLLKPISVHKQVRSLMVSIGAVPQLV 321
Query: 313 EMLVDAQRSLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSIL 372
++L E AL VLD LC+ GR +++ P V+ ++RVS+ T +A+SIL
Sbjct: 322 DILPSLDPECLELALFVLDALCTDVEGRVAVKDSANTIPYTVRVLMRVSENCTNYALSIL 381
Query: 373 WKLCKNEEREEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLNPH 425
W +CK EE + A ++VG KLLL++Q GC K+ +ELLKL + H
Sbjct: 382 WSVCKLAP-EECSPLA--VEVGLAAKLLLVIQSGCDAALKQRSAELLKLCSLH 431
Score = 188 (71.2 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 52/167 (31%), Positives = 90/167 (53%)
Query: 28 EMELTT-PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFE 86
E++L P+ F CPISL+ M+DPVTL TG TY+R NI KW + G++TCP T + L
Sbjct: 58 ELDLQDIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNL-GHLTCPTTMQELWDDT 116
Query: 87 PIPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAGCRDL 146
PN T+ +I W ++ Y + + + + ++E+ + T K++ QA L
Sbjct: 117 VTPNKTLHHLIYTWF--SQKYVLMKKRSEDVQGRAIEI------LGTLKKAKGQARVHAL 168
Query: 147 VAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCL-DENVSVL 192
+++K+ ++ +V+ G VSV++ F+ + E V++L
Sbjct: 169 -SELKQIVIAHLMARKTVVEEGGVSVISSLLGPFTSHAVGSEVVAIL 214
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 214 (80.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 103/387 (26%), Positives = 170/387 (43%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWI-HEDGNITCPVTNRVLTSFEPIPNHT 92
P F C +S +M +PV +++G TY++ I +W+ HE TCP T +VL+ IPNH
Sbjct: 73 PKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKHER---TCPKTKQVLSHRLWIPNHL 129
Query: 93 IRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAGCRDLVAKIKK 152
I +I WC+ N+ Y ++ P+ + V+ + +I + S A + +++
Sbjct: 130 ISDLITQWCLVNK-YDHQK-PSDEL-VAELFTSDIEALLQRVSSSSSVADQIEAAKELRH 186
Query: 153 WTKESDRNKRCIVDNG---AVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLAGEG 209
TK+ N R G +++ L T + +D ++ + E I++ L L L
Sbjct: 187 QTKKFP-NVRVFFVAGIHDSITRLLSPLSTLDEA-VDSSLELQENIVTALFNLSILESNK 244
Query: 210 LTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLI 269
+ + + LK G RRNA L + + D K+ ++ A++ L LI
Sbjct: 245 TVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNKI--IIGNSEAVKALIDLI 302
Query: 270 KEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRSLCEKALSV 329
+E ATK + V+ E K V GL+ + + S ++ LS+
Sbjct: 303 EEGDL-LATKEATSTVFNLCI---VLENK-GKVVSAGLIHAATKKIKAG--SNVDELLSL 355
Query: 330 LDGLCSSDYGRGDAYNNSLIFPVIVKKILRV-SDLAT-EFAVSILWKLC-KNEEREE-KT 385
L L S+ + R + L F + ILR S L T E AV I++ + +N +R K
Sbjct: 356 L-ALIST-HNRAVEEMDKLGFIYDLFSILRKPSSLLTGENAVVIVFNMYDRNRDRSRLKV 413
Query: 386 AFAEALQVGAFQKLLLLLQVGCADKTK 412
E Q G F KL V A K +
Sbjct: 414 VGEEENQHGTFTKLAKQGSVRAARKAQ 440
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 216 (81.1 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 81/350 (23%), Positives = 151/350 (43%)
Query: 38 RCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTIRRMI 97
RCPISL++M DPV L +G TYDR +I KW GNITCP T + L S + N +++++I
Sbjct: 283 RCPISLEIMSDPVVLESGHTYDRSSITKWF-ASGNITCPKTGKTLVSTVLVDNFSVKQVI 341
Query: 98 QDWCVENR----SYGIERIPTPRIPVSSVEVFEINCNITTA--CKSEDQAGCRDLVAKIK 151
Q + +N G +++ +++ E ++ K +++ + LV +I+
Sbjct: 342 QSYSKQNGVVMGQKGKKKVDVAE-SLAAEEAGKLTAEFLAGELIKGDEEEMVKALV-EIR 399
Query: 152 KWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLAGEGLT 211
TK S + C+V+ G V L + + + EN + + L +AG+
Sbjct: 400 ILTKTSTFYRSCLVEAGVVESLMKILRSDDPR-IQENA-----MAGIMNLSKDIAGKTRI 453
Query: 212 YLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLIKE 271
+R +V L G R +SS ++ +I AI L +++K
Sbjct: 454 VGEDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKS 513
Query: 272 PICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRS--LCEKALSV 329
+ K + ++ R++ + + G+V +LL+++ + S + ++++
Sbjct: 514 CDYGDSAKRNALIAIRSLLMNQPDNH--WRILAAGIVPVLLDLVKSEEISDGVTADSMAI 571
Query: 330 LDGLCSSDYGRGDAYNNS-LIFPVIVKKILRVSDLATEFAVSILWKLCKN 378
L + G L V + VS + V++L LC N
Sbjct: 572 LAKMAEYPDGMISVLRRGGLKLAVKILGSSEVSPATKQHCVALLLNLCHN 621
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 209 (78.6 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 69/246 (28%), Positives = 113/246 (45%)
Query: 29 MELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEP- 87
M PN FRCPISL++M DPV L +G T+DR +I++WI + GN TCP+T L+ P
Sbjct: 1 MAFDLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWI-DSGNRTCPITKLPLSE-TPY 58
Query: 88 -IPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAGCRDL 146
IPNH +R +I ++ ++ PR T +S A +
Sbjct: 59 LIPNHALRSLILNFA----HVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLES 114
Query: 147 VAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLA 206
+ ++ + TK +R + ++GAV + C+D VL+E +L+LL L+
Sbjct: 115 LTRLVRLTKRDSSIRRKVTESGAVRAALD--------CVDSCNQVLQE--KSLSLLLNLS 164
Query: 207 GEGLTYLGSASS--MRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEP 264
E +G + +R +V L+ G + A +L + + K + AI
Sbjct: 165 LEDDNKVGLVADGVIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIG-SYPDAISA 223
Query: 265 LFKLIK 270
L L++
Sbjct: 224 LVSLLR 229
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 211 (79.3 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 70/265 (26%), Positives = 126/265 (47%)
Query: 31 LTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPN 90
++ P FRCP+S +LM+DPV L++G TYD+ I+KW+ GN TCP T +VL PN
Sbjct: 72 VSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWL-SSGNRTCPKTQQVLPHTALTPN 130
Query: 91 HTIRRMIQDWC----VENRS-YGIERIPTPR-IPVSSVEVFE-INCNITTACKSEDQAGC 143
IR MI WC +E +S Y + + S E+F + C ++++ + ++
Sbjct: 131 LLIREMISKWCKKNGLETKSQYHPNLVNEDETVTRSDREIFNSLLCKVSSSNLQDQKSAA 190
Query: 144 RDLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLF 203
++L +K T+ R + + + DE + E++++TL L
Sbjct: 191 KELRLLTRKGTEF-----RALFGESPDEITRLVNPLLHGSNPDEKLQ--EDVVTTL-LNI 242
Query: 204 PLAGEGLTYL--GSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGA 261
+ + L + + + ++ L+ G ++ R NA + + + D KV L+ G
Sbjct: 243 SIHDDSNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKV--LIGKSGI 300
Query: 262 IEPLFKLIKEPICPTATKASLVVVY 286
++PL L++E P A K ++
Sbjct: 301 LKPLIDLLEEGN-PLAIKDVAAAIF 324
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 208 (78.3 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 94/368 (25%), Positives = 166/368 (45%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P F+C +S +M DPV + +G TY++ I +W++ D +TCP +VL PNH I
Sbjct: 75 PKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNHD--LTCPTAKQVLYRVCLTPNHLI 132
Query: 94 RRMIQDWCVENRSYGIERIPTPR-IPVSSV-EVF-----EINCNITTACKS-EDQA-GCR 144
+I WC+ N+ Y +R P P+ + V E+F + I++ S DQ +
Sbjct: 133 NELITRWCLANK-Y--DR-PAPKPSDIDYVTELFTDGIESLLQRISSPSSSVADQTEAAK 188
Query: 145 DLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFP 204
+L + +K+ D + + D+ ++ L +D N + E I++ L +
Sbjct: 189 ELALQTEKFVNVRDFFIKELPDS--ITRLLTPLSVLGDE-VDSNPELQENIVTALFNMST 245
Query: 205 LAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEP 264
+ + + +K G + RRNA L L + D K+ ++ A++
Sbjct: 246 FEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSDIDSNKI--IIGNSVALKA 303
Query: 265 LFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRSLCE 324
L LI E +AT +L V I + +K + +GL ++ + A+R+L E
Sbjct: 304 LIDLIGELDDLSATHDALCAV---IDLCCDERENWKKAISLGLAPAAIKN-IKARRNLFE 359
Query: 325 KALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILR-VSDLAT-EFAVSILWKL-CKNEER 381
+L+ L + + + N +I+ ++ ILR S + T E AV I+ + K+ ER
Sbjct: 360 -SLAALALISPHERVIQEVANLGVIYDLL--SILRKTSCMVTCENAVVIVGNMYAKSRER 416
Query: 382 EEKTAFAE 389
K AE
Sbjct: 417 SIKKILAE 424
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 167 (63.8 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
Identities = 40/122 (32%), Positives = 63/122 (51%)
Query: 37 FRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTIRRM 96
F CP+SL++M DPV +S+G TY++ I++WI + G CP T + LT IPN+T++ +
Sbjct: 237 FFCPLSLEVMTDPVIVSSGQTYEKAFIKRWI-DLGLKVCPKTRQTLTHTTLIPNYTVKAL 295
Query: 97 IQDWCVENRSYGIERIPTPRIPVSSVEVFEI-NCNITTACKSEDQAGCRDLVAKIKKWTK 155
I +WC N ++P P S E+ + +C + D R + K W
Sbjct: 296 IANWCETNDV----KLPDPNKSTSLNELSPLLSCTDSIPSTGAD-VSARKVSNKSHDWDA 350
Query: 156 ES 157
S
Sbjct: 351 SS 352
Score = 92 (37.4 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 160 NKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLAGEGLTYLGSASSM 219
NK IV +GAV L + + + +D+ V+VL L+T+ P EG +G +
Sbjct: 701 NKAMIVQSGAVRYLIDLMDP-AAGMVDKAVAVLAN-LATI----P---EGRNAIGQEGGI 751
Query: 220 RCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLIKEPICPTATK 279
+V ++ G + NA L ++ ++ R N++L EGA+ PL L + K
Sbjct: 752 PLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQ-EGAVPPLVALSQSGTPRAREK 810
Query: 280 ASLVVVY 286
A ++ Y
Sbjct: 811 AQALLSY 817
Score = 65 (27.9 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 43/193 (22%), Positives = 79/193 (40%)
Query: 229 GDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLIKEPICPTATKASLVVVYRT 288
G RR + L R + + + L ++E ++ L + +K T +A+ + R
Sbjct: 513 GQFWRRPSERLGSRIVSAPSNETRRDLSEVETQVKKLVEELKSSSLDTQRQATAEL--RL 570
Query: 289 ITSASATEKPIQKFVDMGLVSLLLEMLVDAQRSLCEKALSVLDGLCSSDYGRGDAYNNSL 348
+ + + + + G + LL+E+L + E A++ L L +D + +
Sbjct: 571 LAKHNMDNRIV--IGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGA 628
Query: 349 IFPVIVKKILRVSDLATEFAVSILWKLCKNEEREEKTAFAEALQVGAFQKLLLLLQVGCA 408
I P+I + S A E + + L+ L EE + K Q GA L+ LL G
Sbjct: 629 IEPLI-HVLENGSSEAKENSAATLFSLSVIEENKIKIG-----QSGAIGPLVDLLGNGTP 682
Query: 409 DKTKEHVSELLKL 421
K+ + L L
Sbjct: 683 RGKKDAATALFNL 695
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 210 (79.0 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 99/414 (23%), Positives = 189/414 (45%)
Query: 27 GEMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFE 86
G+M + P RCPISL LM DPV +++G TY+R IEKW DG+ +CP T + L
Sbjct: 270 GQMPIP-PEELRCPISLQLMYDPVIIASGQTYERVCIEKWF-SDGHNSCPKTQQQLPHLS 327
Query: 87 PIPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEV----FEINCNITTACKSEDQAG 142
PN+ ++ +I WC +N GI +PT P S+++ ++ + + KS D G
Sbjct: 328 LTPNYCVKGLIASWCEQN---GIT-VPTG--PPESLDLNYWRLAMSDSESPNSKSVDSVG 381
Query: 143 -C--RDL-VAKIKKW-TKESDRN---KRCIVD--NGAVSVLAEAFETFSKTCLDENVSVL 192
C +D+ V +++ T ES+R K D + ++VL + + +E+++
Sbjct: 382 LCTPKDIRVVPLEESSTIESERQQKEKNNAPDEVDSEINVLEGYQDILAIVDKEEDLAKK 441
Query: 193 EEILSTLTLLFPLAGEGLTYLGSASSMRCMVWFLKSG----DLSRRRNAVLVLREIVSSD 248
+++ + +L E +G+ + + FL+S + + + + L + ++
Sbjct: 442 CKVVENVRILLKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVNN 501
Query: 249 HRKVNVLLDIEGAIEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLV 308
+R ++L G I L K+I C + ++ +Y + S KP+ V
Sbjct: 502 NRNKELMLT-SGVIPLLEKMIS---C-SQSQGPATALYLNL-SCLEKAKPV--IGSSQAV 553
Query: 309 SLLLEMLVDAQRSLCE-KALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEF 367
S + +L+ ++ C+ AL L L + ++++I + V + L E
Sbjct: 554 SFFVNLLLQDTKTQCKLDALHALYNLSTYSPNIPTLLSSNIIKSLQVLASTG-NHLWIEK 612
Query: 368 AVSILWKLCKNEEREEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKL 421
++++L L + E +E+ + G L +L G + ++ VS L+ L
Sbjct: 613 SLAVLLNLASSREGKEEMITTQ----GMISTLATVLDTGDTVEQEQAVSCLVIL 662
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 209 (78.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 100/408 (24%), Positives = 180/408 (44%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P RCPISL LM DPV +++G TY+R IEKW DG+ TCP T++ L+ PN+ +
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWF-SDGHNTCPKTHQQLSHLCLTPNYCV 338
Query: 94 RRMIQDWCVENRSYGIERIPTPRIPVSSVEV----FEINCNITTACKSEDQAG-CRDLVA 148
+ +I WC +N G++ P P S+++ ++ + +T +S + G C+
Sbjct: 339 KALISSWCEQN---GVQ---VPDGPPESLDLNYWRLALSVSESTDTRSAKRVGSCKLKDV 392
Query: 149 KIKKWTKESD-RNKRCIVDNGAVSV-LAEAFETFSKTCLDENVSVLEE---ILSTLTLLF 203
K+ + + + C + V L E T D V L + ++ + +L
Sbjct: 393 KVVPLEESGTIKEEACESEYQEDQVTLVERCTELLTTLTD--VDTLRKKCRVVEQIRVLL 450
Query: 204 PLAGEGLTYLGSASSMRCMVWFLKSG----DLSRRRNAVLVLREIVSSDHRKVNVLLDIE 259
E +G + ++ FL S + S ++ + L + ++R ++L
Sbjct: 451 KDDEEARILMGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVDNNRNKELML-AS 509
Query: 260 GAIEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGL-VSLLLEMLVDA 318
G I PL ++E +C + S+ +Y + S KP+ + L V ++ +L
Sbjct: 510 GII-PL---LEEMLCNPHSHGSVTAIYLNL-SCLEEAKPV---IGSSLAVPFMVNLLWTE 561
Query: 319 QRSLCE-KALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLA--TEFAVSILWKL 375
C+ AL L L + + L+ + + L +SD TE ++++L L
Sbjct: 562 TEVQCKVDALHSLFHLSTYPPNIPCLLSADLVNAL---QSLTISDEQRWTEKSLAVLLNL 618
Query: 376 CKNEEREEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLN 423
NE +++ A +L L +L G ++ ++ VS LL L N
Sbjct: 619 VLNEAGKDEMVSAPSL----VSNLCTILDTGEPNEQEQAVSLLLILCN 662
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 203 (76.5 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 97/429 (22%), Positives = 190/429 (44%)
Query: 25 SGGEMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTS 84
+ G+M + P RCPISL LM DPV +++G TY+R IEKW DG+ TCP T + L
Sbjct: 265 NSGQMPVP-PEELRCPISLQLMCDPVIIASGQTYERVCIEKWF-SDGHNTCPKTQQQLPH 322
Query: 85 FEPIPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSE--DQAG 142
PN+ ++ +I WC +N + +IP+ ++ + + + + + KS+ + G
Sbjct: 323 ISLTPNNCVKGLIASWCEQNGT----QIPSGPPESQDLDYWRLALSDSESTKSQSVNSIG 378
Query: 143 CRDLVA-KI------------KKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENV 189
L KI ++ T+ES + ++ ++VL + + +E +
Sbjct: 379 SYKLKGVKIVPLEENGTTVVERQNTEESFVSDDDDEEDSDINVLERYQDLLAVLNEEEGL 438
Query: 190 SVLEEILSTLTLLFPLAGEGLTYLGSASSMRCMVWFLKSG----DLSRRRNAVLVLREIV 245
+++ + LL E ++G+ + ++ FL S + + + + + L +
Sbjct: 439 EKKCKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLA 498
Query: 246 SSDHRKVNVLLDIEGAIEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDM 305
+++R ++L G I +L+++ I + S +Y ++ + I +
Sbjct: 499 VNNNRNKELMLT-SGVI----RLLEKMISSAESHGSATALYLNLSCLDEAKSVIGSSQAV 553
Query: 306 GLVSLLLEMLVDAQRSLCEKALSVLDGLCSSDYGRG-DAYNNSLIFPVIVKKILRVSD-L 363
+ LL+ ++ Q L AL L L S Y A +S I + + + L
Sbjct: 554 PFLVQLLQKEIETQCKL--DALHALYNL--STYSPNIPALLSSNIIKSLQGLLASTGENL 609
Query: 364 ATEFAVSILWKLCKNEEREEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLN 423
E ++++L L ++E +++ ++ G L +L +G + ++ VS LL L N
Sbjct: 610 WIEKSLAVLLNLASSQEGKDEAVSSQ----GMISSLATVLDMGDTTEQEQAVSCLLILCN 665
Query: 424 PHRARLECI 432
R CI
Sbjct: 666 ---GRESCI 671
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 170 (64.9 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 38/106 (35%), Positives = 56/106 (52%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P+ FRC +SL+LM DPV +++G T++R I+KWI + G + CP T + L+ PN +
Sbjct: 241 PSDFRCSLSLELMTDPVIVASGQTFERVFIQKWI-DMGLMVCPKTRQALSHTTLTPNFIV 299
Query: 94 RRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSED 139
R + WC N Y P P + S E F + A SE+
Sbjct: 300 RAFLASWCETNNVYP----PDPLELIHSSEPFPLLVESVRASSSEN 341
Score = 70 (29.7 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 30/127 (23%), Positives = 53/127 (41%)
Query: 160 NKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLAGEGLTYLGSASSM 219
NK +++ GAV L E +D ++E+ + L L + EG +G +
Sbjct: 579 NKTKVIEAGAVRYLVEL--------MDPAFGMVEKAVVVLANLATVR-EGKIAIGEEGGI 629
Query: 220 RCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLIKEPICPTATK 279
+V ++ G + NA L ++ + + N ++ EG I PL L K K
Sbjct: 630 PVLVEVVELGSARGKENATAALLQLCTHSPKFCNNVIR-EGVIPPLVALTKSGTARGKEK 688
Query: 280 ASLVVVY 286
A ++ Y
Sbjct: 689 AQNLLKY 695
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 178 (67.7 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 37 FRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTIRRM 96
F+CPIS+++M+DP + G TY+ E KW+ G T P TN+ L + +PNHT+R +
Sbjct: 237 FKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGR-TSPKTNKPLENHNLVPNHTLRII 295
Query: 97 IQDWCVENRSY 107
I+DW +N +Y
Sbjct: 296 IKDWLEKNPNY 306
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 176 (67.0 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 82/381 (21%), Positives = 172/381 (45%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWI-HEDGNITCPVTNRVLTSFEPIPNHT 92
P F C +S +M +P+ +++G T+++ I +W+ HE TCP T +VL IPNH
Sbjct: 66 PKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKHER---TCPRTKQVLYHRFMIPNHL 122
Query: 93 IRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQA-GCRDLVAKIK 151
I +I++WC+ + ++ + I + + ++ + I++ EDQ ++L K K
Sbjct: 123 INEVIKEWCLIH-NFDRPKTSDEVIDLFTGDLESLLQRISSPSSVEDQTEAAKELALKAK 181
Query: 152 KWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLAGEGLT 211
+++ C+ + T D N LE I++ L + F + + T
Sbjct: 182 RFSSV------CVYFVAKIPDSITRLLTPLSISEDSNPEFLENIVTALHI-FSTSEKNKT 234
Query: 212 YLG-SASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLIK 270
+ + + + ++K G + R ++ + + +D K+ ++ ++ L +I+
Sbjct: 235 LVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSLSYTDSNKI--IIGNSEVLKALIHVIE 292
Query: 271 EPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRSLCEKALSVL 330
E ++A + +++ ++ +K V GL+ ++ + S LS+L
Sbjct: 293 EGDSLATSEA-----FSALSNLCPVKEISEKAVSEGLIRAAIKKIKAG--SNVSMLLSLL 345
Query: 331 DGLCSSDYGRGDAYNN-SLIFPVIVKKILRVSD--LATEFAVSILWKLCKNEE------- 380
+ + ++ + +N LI+ + ILR S+ + E AV I++ +CK+ +
Sbjct: 346 AFVSTQNHQTTEEMDNLGLIYDLF--SILRNSNSLVNDENAVVIVYNICKSYKALQNVVL 403
Query: 381 REEK--TAFAEALQVGAFQKL 399
REEK E + G F +L
Sbjct: 404 REEKRDVVLEEENKHGTFTRL 424
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 165 (63.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 73/292 (25%), Positives = 117/292 (40%)
Query: 136 KSEDQAGCRDLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEI 195
+S A R AK++ K N+ I ++GA+ L C D +E
Sbjct: 193 RSSSVAIKRSAAAKLRLLAKNRADNRVLIGESGAIQALIPLLR-----CNDPWT---QEH 244
Query: 196 LSTLTLLFPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVL 255
T L L + + + +++ +VW LK+G + ++NA L + + K ++
Sbjct: 245 AVTALLNLSLHDQNKAVIAAGGAIKSLVWVLKTGTETSKQNAACALLSLALLEENKGSI- 303
Query: 256 LDIEGAIEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEML 315
GAI PL L+ C K +L +Y+ T E+ V G V L++++
Sbjct: 304 -GACGAIPPLVSLLLNGSC-RGKKDALTTLYKLCTLQQNKERA----VTAGAVKPLVDLV 357
Query: 316 VDAQRSLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKL 375
+ + EKA+ VL L + D G+ I +V+ I S EFA+ L +L
Sbjct: 358 AEEGTGMAEKAMVVLSSLAAIDDGKEAIVEEGGI-AALVEAIEDGSVKGKEFAILTLLQL 416
Query: 376 CKNEEREEKTAFAEALQVGAFQKLLLLLQVGCAD-KTKEHVSELLKLLNPHR 426
C + R E GA L+ L Q G + K LL L R
Sbjct: 417 CSDSVRNRGLLVRE----GAIPPLVGLSQSGSVSVRAKRKAERLLGYLREPR 464
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 31/67 (46%), Positives = 41/67 (61%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P+ F CPI+ +LMKDPV S G +Y+RE +E WIH+ T P+TN L S PN T+
Sbjct: 403 PDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKR-TSPMTNLALPSLVLTPNRTL 461
Query: 94 RRMIQDW 100
+ I W
Sbjct: 462 KMAINRW 468
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 31/67 (46%), Positives = 41/67 (61%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P+ F CPI+ +LMKDPV S G +Y+RE +E WIH+ T P+TN L S PN T+
Sbjct: 405 PDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKR-TSPMTNLALPSLVLTPNRTL 463
Query: 94 RRMIQDW 100
+ I W
Sbjct: 464 KMAINRW 470
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 159 (61.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 27/71 (38%), Positives = 46/71 (64%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P++F CPIS ++M++P + G TY+ E++ +W+ ++G+ T P+TN L +PNH +
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWL-DNGHETSPMTNLKLAHNNLVPNHAL 556
Query: 94 RRMIQDWCVEN 104
R IQ+W N
Sbjct: 557 RSAIQEWLQRN 567
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 155 (59.6 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 30/74 (40%), Positives = 45/74 (60%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P +F CPISL++MKDP + G TY+ E I W+ + G+ T P+TN L + +PN +
Sbjct: 326 PQYFICPISLEVMKDPQLAADGFTYEAEAISTWL-QGGHETSPMTNTKLHHTKLVPNLAL 384
Query: 94 RRMIQDWCVENRSY 107
R IQ+W + S+
Sbjct: 385 RSAIQEWLHASSSF 398
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 158 (60.7 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P+H+ CPI ++MKDP+ + G TY+ E I +W+ +G+ T P+TN + IPNH +
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWL-ANGHDTSPMTNLKMEDCNLIPNHAL 794
Query: 94 RRMIQDW 100
IQDW
Sbjct: 795 HLAIQDW 801
>TAIR|locus:2176177 [details] [associations]
symbol:AT5G51270 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AB023044
HSSP:Q9WUD1 HOGENOM:HOG000237993 IPI:IPI00525770 RefSeq:NP_199940.1
UniGene:At.55484 ProteinModelPortal:Q9LU47 SMR:Q9LU47 PRIDE:Q9LU47
EnsemblPlants:AT5G51270.1 GeneID:835201 KEGG:ath:AT5G51270
GeneFarm:2016 TAIR:At5g51270 InParanoid:Q9LU47 OMA:ATHEAKE
PhylomeDB:Q9LU47 ProtClustDB:CLSN2916710 Genevestigator:Q9LU47
Uniprot:Q9LU47
Length = 819
Score = 158 (60.7 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P+HF CP+ D+MK+P + G TYDR IE+W+ + + T PVTN L + +PNHT+
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWM--ENHRTSPVTNSPLQNVNLLPNHTL 807
Query: 94 RRMIQDWCVENR 105
I +W N+
Sbjct: 808 YAAIVEWRNRNQ 819
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P+ F CPI+ +LMKDP+ S G +Y++E +E WI T P+TN VL+S PN T+
Sbjct: 404 PDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKR-TSPMTNLVLSSVILTPNRTL 462
Query: 94 RRMIQDWCVE 103
+ I W E
Sbjct: 463 KMAIDRWLSE 472
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P+ F CPI+ +LMKDPV S G +Y++E +E WI + T P+TN +L S PN T+
Sbjct: 405 PDEFLCPITRELMKDPVIASDGYSYEKEAMENWISKKKR-TSPMTNLILPSMVLTPNRTL 463
Query: 94 RRMIQDW 100
+ I W
Sbjct: 464 KMAISRW 470
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P+ F CPI+ +LMKDP+ S G +Y++E +E WI T P+TN VL+S PN T+
Sbjct: 405 PDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKR-TSPMTNLVLSSVILTPNRTL 463
Query: 94 RRMIQDWCVE 103
+ I W E
Sbjct: 464 KMAIDRWLSE 473
>TAIR|locus:2047605 [details] [associations]
symbol:AT2G19410 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HSSP:P36897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC003058 HOGENOM:HOG000237993
IPI:IPI00517039 PIR:T01289 RefSeq:NP_179531.1 UniGene:At.52830
ProteinModelPortal:Q8S8S7 SMR:Q8S8S7 PRIDE:Q8S8S7
EnsemblPlants:AT2G19410.1 GeneID:816460 KEGG:ath:AT2G19410
GeneFarm:2021 TAIR:At2g19410 InParanoid:Q8S8S7 OMA:VETANSK
PhylomeDB:Q8S8S7 ProtClustDB:CLSN2683172 Genevestigator:Q8S8S7
Uniprot:Q8S8S7
Length = 801
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 31 LTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPN 90
L P+H+ CPI ++M++P + G TY+R+ I W+ E NI+ PVT + L F+ PN
Sbjct: 723 LRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWL-EKHNIS-PVTRQKLDHFKLTPN 780
Query: 91 HTIRRMIQDW 100
HT+R I+DW
Sbjct: 781 HTLRSAIRDW 790
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 111 (44.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 54/255 (21%), Positives = 116/255 (45%)
Query: 170 VSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLAGEGLTYLGSASSMRCMVWFLKSG 229
VS+ + +F ++ L ++++ + + L + + + + ++ LKSG
Sbjct: 270 VSLCTDRILSFLRSLLVSRYNLVQTNAAASVVNLSLEKQNKVKIVRSGFVPLLIDVLKSG 329
Query: 230 DLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLIKEPICPTATK-ASLVVVYRT 288
+ + L + D K+ ++ + GA+EPL ++ A + A+L + + +
Sbjct: 330 TTEAQEHVAGALFSLALEDENKM--VIGVLGAVEPLLHALRSSESERARQDAALALYHLS 387
Query: 289 ITSASATEKPIQKFVDMGLVSLLLEMLVDAQRSLCEKALSVLDGLCSSDYGRGDAYNNSL 348
+ ++ T + V G V LL M+ + + L VL L + G+G + +
Sbjct: 388 LIPSNRT-----RLVRAGAVPTLLSMVRSGDST--SRILLVLCNLAACPDGKGAMLDGNA 440
Query: 349 IFPVIVKKILRV----SDLATEFAVSILWKLCKNEEREEKTAFAEALQVGAFQKLLLLLQ 404
+ ++V K+ V S+ A E V++L LC+ R A +EA GA +++L+ ++
Sbjct: 441 V-AILVGKLREVGGGDSEAARENCVAVLLTLCQGNLRFRGLA-SEA---GA-EEVLMEVE 494
Query: 405 VGCADKTKEHVSELL 419
++ KE S++L
Sbjct: 495 ENGNERVKEKASKIL 509
Score = 87 (35.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 33 TPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHT 92
TP F CPI+ LM DPV +S+G T++R +++ G I + IPN
Sbjct: 31 TPPEFLCPITGFLMSDPVVVSSGQTFERLSVQV-CRNLGYIPDLLDGTRPDLSTVIPNLA 89
Query: 93 IRRMIQDWC 101
++ I WC
Sbjct: 90 MKSTIFSWC 98
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 150 (57.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 30/67 (44%), Positives = 41/67 (61%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P+ F CPI+ +LMKDPV S G +Y++E +E WI + T P+TN VL S PN T+
Sbjct: 405 PDEFICPITRELMKDPVIASDGYSYEKEAMENWISKKKR-TSPMTNLVLPSAVLTPNRTL 463
Query: 94 RRMIQDW 100
+ I W
Sbjct: 464 KMAINRW 470
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 153 (58.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 82/349 (23%), Positives = 146/349 (41%)
Query: 37 FRCPISLDLMKDPVTLSTGITYDRENIEKWIHE---DGN-ITCPVTNRVLTSFEPIPNHT 92
F CP++ +M +PVTL G T++RE IEKW E +G ++CP+T++ L+ + P+
Sbjct: 29 FICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPSIA 88
Query: 93 IRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINC--NITTACKSED---QAGCR-DL 146
+R I++W N + ++ I + + + E + N+ C++ Q C L
Sbjct: 89 LRNTIEEWRARNDALKLD-IARQSLYLGNAETNILLALKNVREICRNIRKIRQRVCNPQL 147
Query: 147 VAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDEN--VSVLEEILSTLTLLFP 204
V I K S RC + V+ E E SK + E V + + LS
Sbjct: 148 VRLITDMLKSSSHEVRCKALQ-TLQVVVEGDEE-SKAIVAEGDTVRTIVKFLSQEPSKGR 205
Query: 205 LAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNV-------LLD 257
A + + S S C K G + A+++L + SS V+ L +
Sbjct: 206 EAAVSVLFELSKSEALCE----KIGSI---HGAIILLVGLTSSKSENVSTVEKADKTLTN 258
Query: 258 IEGAIEPLFKLI----KEPICPTATKAS--LVVVYRTITSASATEKPIQKFVDMGLVSLL 311
+E + E + ++ +P+ + S V A ++ V + S L
Sbjct: 259 LERSEENVRQMAINGRLQPLLAKLLEGSPETKVSMAFYLGVLALNNDVKVIVAQTVGSSL 318
Query: 312 LEMLVDAQRSLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRV 360
++++ S E AL L+ + S + G N+ I P ++K + V
Sbjct: 319 IDLMRTRDMSQREAALGALNNISSFE-GSAKLLINTGILPPLIKDLFYV 366
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 151 (58.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P H+ CPI ++M+DP + G TY+R+ I++WI + +++ PVT L + PNHT+
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVS-PVTKHRLKHSDLTPNHTL 767
Query: 94 RRMIQDWCVENR 105
R I++W +R
Sbjct: 768 RSAIREWRSRSR 779
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 146 (56.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 33 TPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHT 92
TP+ F CPI+ ++MKDPV + G +Y+RE IE WI N T P+TN L + PN T
Sbjct: 417 TPDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTK-NRTSPMTNLPLQTTLLTPNRT 475
Query: 93 IRRMIQDW 100
++ I W
Sbjct: 476 LKMAIFRW 483
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P +F CPI+ D+M+DP + G TY+ E I +W E G+ T P+ N+ L +PN +
Sbjct: 354 PQYFICPITHDIMEDPHVAADGFTYEGEAISRWF-ERGHETSPMINKRLPHTSLVPNLAL 412
Query: 94 RRMIQDW 100
R IQ+W
Sbjct: 413 RSAIQEW 419
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 31 LTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPN 90
+ P+ F CPI+ +LMKDPV + G +Y++E +E WI + + P+TN L S PN
Sbjct: 402 VAVPDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRR-SSPMTNLPLPSLVLTPN 460
Query: 91 HTIRRMIQDW 100
T++ I W
Sbjct: 461 RTLKMAISRW 470
>TAIR|locus:2117343 [details] [associations]
symbol:AT4G25160 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002238 "response
to molecule of fungal origin" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00582 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161562 GO:GO:0004842 EMBL:AL035523
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AL035396
HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BX828107 IPI:IPI00540343
PIR:T05537 RefSeq:NP_194246.2 UniGene:At.32287
ProteinModelPortal:Q9SW11 SMR:Q9SW11 IntAct:Q9SW11 PaxDb:Q9SW11
PRIDE:Q9SW11 EnsemblPlants:AT4G25160.1 GeneID:828619
KEGG:ath:AT4G25160 GeneFarm:2015 TAIR:At4g25160 InParanoid:Q9SW11
OMA:FQQELEI PhylomeDB:Q9SW11 ProtClustDB:CLSN2918598
Genevestigator:Q9SW11 Uniprot:Q9SW11
Length = 835
Score = 144 (55.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P HF CP+ D+M +P + G TYDR IE+W+ E T P+T+ L S +PN+T+
Sbjct: 767 PTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKEHN--TSPMTDSPLHSKNLLPNYTL 824
Query: 94 RRMIQDW 100
I +W
Sbjct: 825 YTAIMEW 831
>UNIPROTKB|H3BTA3 [details] [associations]
symbol:STUB1 "E3 ubiquitin-protein ligase CHIP"
species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:Z92544 HGNC:HGNC:11427 Ensembl:ENST00000564316 Uniprot:H3BTA3
Length = 157
Score = 116 (45.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P++ IS +LM++P +GITYDR++IE+ + G+ PVT LT + IPN +
Sbjct: 82 PDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQEQLIPNLAM 140
Query: 94 RRMIQDWCVEN 104
+ +I + EN
Sbjct: 141 KEVIDAFISEN 151
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 136 (52.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 72/279 (25%), Positives = 121/279 (43%)
Query: 149 KIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLAGE 208
+I+ +K N+ I GA+ L S + L L+E T L L E
Sbjct: 86 EIRLLSKNKPENRIKIAKAGAIKPL---ISLISSSDLQ-----LQEYGVTAILNLSLCDE 137
Query: 209 GLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKL 268
+ S+ +++ +V LK G + + NA L + + KV + GAI PL
Sbjct: 138 NKESIASSGAIKPLVRALKMGTPTAKENAACALLRLSQIEENKVAI--GRSGAI-PLLVN 194
Query: 269 IKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRSLCEKALS 328
+ E A K + +Y + SA E I+ V G++ L+E++ D ++ +K+
Sbjct: 195 LLETGGFRAKKDASTALY---SLCSAKENKIRA-VQSGIMKPLVELMADFGSNMVDKSAF 250
Query: 329 VLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKNEEREEKTAFA 388
V+ L S + + PV+V+ + + E AVSIL +LC+ E +T A
Sbjct: 251 VMSLLMSVPESKPAIVEEGGV-PVLVEIVEVGTQRQKEMAVSILLQLCE-ESVVYRTMVA 308
Query: 389 EALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLNPHRA 427
GA L+ L Q G + + K+ L++LL R+
Sbjct: 309 RE---GAIPPLVALSQAGTS-RAKQKAEALIELLRQPRS 343
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 140 (54.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 82/350 (23%), Positives = 149/350 (42%)
Query: 37 FRCPISLDLMKDPVTLSTGITYDRENIEKWIHE---DGNI-TCPVTNRVLTSFEPIPNHT 92
F CP++ ++M DPVTL G T++RE IEKW E G +CP+T++ LTS + +
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSASIA 86
Query: 93 IRRMIQDWCVENRSYGIERIPTPRIPVSSVE--VFEINCNITTACKS--EDQAGCRD--L 146
+R I++W N + ++ I + + + E + + ++ C++ ++ G R+ L
Sbjct: 87 LRNTIEEWRSRNDAAKLD-IARQSLFLGNAETDILQALMHVRQICRTIRSNRHGVRNSQL 145
Query: 147 VAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDEN--VSVLEEILSTLTLLFP 204
+ I K + R + V+ E + SK + E V L + LS
Sbjct: 146 IHMIIDMLKSTSHRVRYKALQ-TLQVVVEGDDE-SKAIVAEGDTVRTLVKFLSHEPSKGR 203
Query: 205 LAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEP 264
A L + S S C K G + A+++L + SS+ V+++ + +E
Sbjct: 204 EAAVSLLFELSKSEALCE----KIGSI---HGALILLVGLTSSNSENVSIVEKADRTLEN 256
Query: 265 LFKLIKEPICPTATKASLVVVYRTITSASATEK----------PIQKFVDMGLVSLLLEM 314
+ + +E + A+ L + + S K P+ V + + +
Sbjct: 257 MERS-EEIVRQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPLNNDVKVLVAQTVGSS 315
Query: 315 LVDAQRS----LCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRV 360
LVD RS E AL L+ + S + G + I P ++K + V
Sbjct: 316 LVDLMRSGDMPQREAALKALNKISSFE-GSAKVLISKGILPPLIKDLFYV 364
>WB|WBGene00000500 [details] [associations]
symbol:chn-1 species:6239 "Caenorhabditis elegans"
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IDA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040011 "locomotion"
evidence=IGI;IMP] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0018991 "oviposition" evidence=IGI] [GO:0045214
"sarcomere organization" evidence=IGI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0030544 "Hsp70 protein binding" evidence=IPI] [GO:0051087
"chaperone binding" evidence=IPI] InterPro:IPR001440
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 GO:GO:0005737
GO:GO:0018991 GO:GO:0002119 GO:GO:0040011 Gene3D:1.25.40.10
GO:GO:0045214 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000209 GO:GO:0000151 GO:GO:0051865 KO:K09561
GeneTree:ENSGT00650000093277 EMBL:FO081495 EMBL:AF303269 PIR:T25874
RefSeq:NP_491781.2 UniGene:Cel.19411 ProteinModelPortal:G5ECY6
SMR:G5ECY6 EnsemblMetazoa:T09B4.10.1 EnsemblMetazoa:T09B4.10.2
GeneID:172303 KEGG:cel:CELE_T09B4.10 CTD:172303 WormBase:T09B4.10
OMA:HSWAYKL NextBio:874925 Uniprot:G5ECY6
Length = 266
Score = 131 (51.2 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 41 ISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTIRRMIQDW 100
I+L+LMK+PV + +GITYDRE I + + G+ PVT + LT E IPN+ ++ +I+ +
Sbjct: 193 ITLELMKEPVIVPSGITYDREEIVQHLRRIGHFD-PVTRKPLTENEIIPNYALKEVIEKF 251
Query: 101 CVEN 104
+N
Sbjct: 252 LDDN 255
>TAIR|locus:2151641 [details] [associations]
symbol:AT5G61560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004713
"protein tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0002238 "response to molecule
of fungal origin" evidence=RCA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0006499 "N-terminal
protein myristoylation" evidence=RCA] [GO:0006865 "amino acid
transport" evidence=RCA] [GO:0009581 "detection of external
stimulus" evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR003613 InterPro:IPR006016 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00582 Pfam:PF04564
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 EMBL:AB012239 HSSP:Q8VZ40
HOGENOM:HOG000237993 EMBL:AK228747 IPI:IPI00543972 IPI:IPI00886514
RefSeq:NP_200964.2 UniGene:At.29098 ProteinModelPortal:Q9FKG5
SMR:Q9FKG5 STRING:Q9FKG5 PaxDb:Q9FKG5 PRIDE:Q9FKG5
EnsemblPlants:AT5G61560.1 GeneID:836277 KEGG:ath:AT5G61560
GeneFarm:2020 TAIR:At5g61560 InParanoid:Q9FKG5 OMA:CIERETE
PhylomeDB:Q9FKG5 ProtClustDB:CLSN2918426 Genevestigator:Q9FKG5
Uniprot:Q9FKG5
Length = 796
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P HF CPI+ D+M++P S G TY++ I++W+ + N P+T+ S +PNH++
Sbjct: 726 PTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQK--NHKSPMTDLPFPSDSLLPNHSL 783
Query: 94 RRMIQDW 100
I++W
Sbjct: 784 LSAIKEW 790
>TAIR|locus:2198180 [details] [associations]
symbol:AT1G01670 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
eggNOG:KOG0167 PIR:E86147 EMBL:AK118101 IPI:IPI00528098
RefSeq:NP_171673.2 UniGene:At.42637 ProteinModelPortal:Q8GXQ7
SMR:Q8GXQ7 EnsemblPlants:AT1G01670.1 GeneID:839365
KEGG:ath:AT1G01670 TAIR:At1g01670 InParanoid:Q8GXQ7 OMA:NDNEMEL
PhylomeDB:Q8GXQ7 Genevestigator:Q8GXQ7 Uniprot:Q8GXQ7
Length = 365
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 29 MELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPI 88
+ + P F CPIS D+M++P + G TY+ + +W++ G + P+TN L + I
Sbjct: 290 VSIEPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKS-PMTNLRLENRNLI 348
Query: 89 PNHTIRRMIQDW 100
PN +R I+DW
Sbjct: 349 PNLVLRSAIKDW 360
>TAIR|locus:2050669 [details] [associations]
symbol:AT2G45910 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
EMBL:AC004665 HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BT002512
EMBL:AK227123 IPI:IPI00542046 PIR:T02456 RefSeq:NP_182115.2
UniGene:At.36571 ProteinModelPortal:Q8GUH1 SMR:Q8GUH1 PRIDE:Q8GUH1
EnsemblPlants:AT2G45910.1 GeneID:819199 KEGG:ath:AT2G45910
GeneFarm:1984 TAIR:At2g45910 InParanoid:Q8GUH1 OMA:KGTFAYM
PhylomeDB:Q8GUH1 ProtClustDB:CLSN2680270 Genevestigator:Q8GUH1
Uniprot:Q8GUH1
Length = 834
Score = 134 (52.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P +F CPI ++M+DP + G TY+ E I W+ + + T P+TN L+ I NH +
Sbjct: 764 PPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHD-TSPMTNVKLSHTSLIANHAL 822
Query: 94 RRMIQDW 100
R IQ+W
Sbjct: 823 RSAIQEW 829
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 128 (50.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 58/251 (23%), Positives = 111/251 (44%)
Query: 192 LEEILSTLTLLFPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRK 251
L+E T L L E + S+ +++ +V L+ G + + NA L + + K
Sbjct: 119 LQEYGVTAVLNLSLCDENKEMIVSSGAVKPLVNALRLGTPTTKENAACALLRLSQVEENK 178
Query: 252 VNVLLDIEGAIEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLL 311
+ + GAI L L++ A K + +Y S +T + + V+ G++ L
Sbjct: 179 ITI--GRSGAIPLLVNLLENGGF-RAKKDASTALY----SLCSTNENKTRAVESGIMKPL 231
Query: 312 LEMLVDAQRSLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSI 371
+E+++D + + +K+ V++ L S+ + + PV+V+ + + E +VSI
Sbjct: 232 VELMIDFESDMVDKSAFVMNLLMSAPESKPAVVEEGGV-PVLVEIVEAGTQRQKEISVSI 290
Query: 372 LWKLCKNEEREEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLNPHRARLEC 431
L +LC+ E +T A GA L+ L Q + K L++LL R + +
Sbjct: 291 LLQLCE-ESVVYRTMVARE---GAVPPLVALSQGSASRGAKVKAEALIELLRQPRQQQQQ 346
Query: 432 IDSMDFKDLKR 442
+ D +R
Sbjct: 347 QQHFESNDNER 357
>UNIPROTKB|Q0DR28 [details] [associations]
symbol:PUB57 "U-box domain-containing protein 57"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000719
InterPro:IPR003613 InterPro:IPR008266 InterPro:IPR011009
Pfam:PF00069 Pfam:PF04564 PROSITE:PS00109 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 EMBL:DP000009 EMBL:AP008209 GO:GO:0004713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC114983 EMBL:AK069682 RefSeq:NP_001050396.1 UniGene:Os.52876
EnsemblPlants:LOC_Os03g31070.1 GeneID:4333147
KEGG:dosa:Os03t0424200-01 KEGG:osa:4333147 Gramene:Q0DR28
OMA:IDINATF Uniprot:Q0DR28
Length = 518
Score = 129 (50.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 26/69 (37%), Positives = 37/69 (53%)
Query: 32 TTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNH 91
+ P F CPIS+++MKDP S G TY+ E I W + G P+TN L + +PN
Sbjct: 434 SVPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWF-DRGISRSPMTNLALPNLNLVPNR 492
Query: 92 TIRRMIQDW 100
+R I +
Sbjct: 493 VLRSFIHGY 501
>TAIR|locus:2173742 [details] [associations]
symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
Genevestigator:Q9FL17 Uniprot:Q9FL17
Length = 550
Score = 88 (36.0 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 30/92 (32%), Positives = 42/92 (45%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLT---SFEP-IP 89
P F CPIS LM DP+ +S+G +Y+R + I C T F IP
Sbjct: 59 PAEFLCPISGSLMADPIIVSSGHSYERACV---------IACKTLGFTPTPPPDFSTVIP 109
Query: 90 NHTIRRMIQDWCVENRSYGIERIPTPRIPVSS 121
N ++ I WC E R + P P+ P++S
Sbjct: 110 NLALKSAIHSWC-ERRCF-----PPPK-PLNS 134
Score = 84 (34.6 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 43/217 (19%), Positives = 101/217 (46%)
Query: 226 LKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLIKEPICPTATKASLVVV 285
LK G + + ++ V+ + D K + + G +EPL LI+ T ++L +
Sbjct: 320 LKCGSVEAQEHSAGVIFSLALEDENKTAI--GVLGGLEPLLHLIRVGTELTRHDSALALY 377
Query: 286 YRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRSLCEKALSVLDGLCSSDYGRGDAYN 345
+ ++ ++ K V +G V +LL M+ Q + + L +L + S R +
Sbjct: 378 HLSLVQSNRG-----KLVKLGAVQMLLGMVSLGQ--MIGRVLLILCNMASCPVSRPALLD 430
Query: 346 NSLIFPVI--VKKILRVSDLATEFAVSILWKLCKNEEREEKTAFAEALQVGAFQKLLLLL 403
+ + ++ +++ V++ E V++L+ L + K A+ A ++L+ +
Sbjct: 431 SGGVECMVGVLRRDREVNESTRESCVAVLYGLSHDGGLRFKGL---AMAANAVEELVKVE 487
Query: 404 QVGCADKTKEHVSELLKLLNPHRARLECIDSMDFKDL 440
+ G ++ K+ +L++L RA++E D ++ +++
Sbjct: 488 RSG-RERAKQKARRVLEVL---RAKIEDDDLVENEEI 520
>UNIPROTKB|J9NRV4 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00504 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 OMA:QENELHS
GeneTree:ENSGT00650000093277 EMBL:AAEX03004675
Ensembl:ENSCAFT00000049790 Uniprot:J9NRV4
Length = 231
Score = 116 (45.9 bits), Expect = 0.00022, P = 0.00022
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P++ IS +LM++P +GITYDR++IE+ + G+ PVT LT + IPN +
Sbjct: 156 PDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQEQLIPNLAM 214
Query: 94 RRMIQDWCVEN 104
+ +I + EN
Sbjct: 215 KEVIDAFISEN 225
>UNIPROTKB|F1P105 [details] [associations]
symbol:STUB1 "STIP1 homology and U box-containing protein
1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IEA] [GO:0019900 "kinase binding"
evidence=IEA] [GO:0030544 "Hsp70 protein binding" evidence=IEA]
[GO:0030579 "ubiquitin-dependent SMAD protein catabolic process"
evidence=IEA] [GO:0030911 "TPR domain binding" evidence=IEA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031943 "regulation of glucocorticoid metabolic
process" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0042405 "nuclear inclusion body" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0046332 "SMAD binding" evidence=IEA]
[GO:0051787 "misfolded protein binding" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0051879 "Hsp90
protein binding" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0071218 "cellular response to
misfolded protein" evidence=IEA] [GO:0090035 "positive regulation
of chaperone-mediated protein complex assembly" evidence=IEA]
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00504 GO:GO:0005737 GO:GO:0043161 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515
GO:GO:0032436 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0042405 GO:GO:0071218 GO:GO:0034450 IPI:IPI00600865
OMA:QENELHS GO:GO:0090035 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 EMBL:AADN02049413 EMBL:AADN02049414
Ensembl:ENSGALT00000001529 Uniprot:F1P105
Length = 251
Score = 116 (45.9 bits), Expect = 0.00028, P = 0.00028
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P++ IS +LM++P +GITYDR++IE+ + G+ PVT LT + IPN +
Sbjct: 176 PDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQDQLIPNLAM 234
Query: 94 RRMIQDWCVEN 104
+ +I + EN
Sbjct: 235 KEVIDAFISEN 245
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 90 (36.7 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 33 TPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEP-IPNH 91
TP F CPI+ LM DPV +++G T++R +++ + + + + + IPN
Sbjct: 10 TPTEFLCPITGFLMSDPVVVASGQTFERISVQ--VCRNLSFAPKLHDGTQPDLSTVIPNL 67
Query: 92 TIRRMIQDWCVENR 105
++ I WC N+
Sbjct: 68 AMKSTILSWCDRNK 81
Score = 76 (31.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 45/203 (22%), Positives = 86/203 (42%)
Query: 226 LKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLIKEPICPTATKASLVVV 285
LKSG + + + L + + K+ ++ + GA+EPL ++ A + + + +
Sbjct: 275 LKSGSTEAQEHVIGALFSLAVEEENKM--VIGVLGAVEPLLHALRSSESERARQDAALAL 332
Query: 286 YRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRSLCEKALSVLDGLCSSDYGRGDAYN 345
Y S + V G V ++L M+ + + + L +L L + G+G +
Sbjct: 333 YHL----SLIPNNRSRLVKAGAVPMMLSMIRSGESA--SRILLLLCNLAACSEGKGAMLD 386
Query: 346 NSLIFPVIVKKILRV----SDLAT-EFAVSILWKLCKNEEREEKTAFAEALQVGAFQKLL 400
+ + ++V K+ SD A E V L L R A +EA GA + L
Sbjct: 387 GNAV-SILVGKLRESGGAESDAAARENCVGALLTLSVGNMRFRGLA-SEA---GAEEILT 441
Query: 401 LLLQVGCAD-KTKEHVSELLKLL 422
+++ + KE S++L+ L
Sbjct: 442 EIVESESGSGRLKEKASKILQTL 464
>FB|FBgn0027052 [details] [associations]
symbol:CHIP "CHIP" species:7227 "Drosophila melanogaster"
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0030018 "Z
disc" evidence=IDA] InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 GO:GO:0005737
GO:GO:0043161 EMBL:AE014134 Gene3D:1.25.40.10 GO:GO:0046332
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0051879
GO:GO:0004842 InterPro:IPR013105 Pfam:PF07719 GO:GO:0032436
GO:GO:0000209 GO:GO:0000151 GO:GO:0030544 KO:K09561 OMA:QENELHS
GO:GO:0030911 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 FlyBase:FBgn0027052 EMBL:AF129084
EMBL:AY069760 RefSeq:NP_477441.1 UniGene:Dm.392 SMR:Q9XYW6
IntAct:Q9XYW6 MINT:MINT-316282 STRING:Q9XYW6
EnsemblMetazoa:FBtr0080027 GeneID:34433 KEGG:dme:Dmel_CG5203
UCSC:CG5203-RA CTD:34433 InParanoid:Q9XYW6 GenomeRNAi:34433
NextBio:788473 Uniprot:Q9XYW6
Length = 289
Score = 117 (46.2 bits), Expect = 0.00031, P = 0.00031
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 37 FRC-PISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTIRR 95
F C IS +++ DPV +GITY+R++IE+ + G+ PVT LT + IPN +++
Sbjct: 216 FLCGKISFEILTDPVITPSGITYERKDIEEHLQRVGHFD-PVTRVKLTQDQLIPNFSMKE 274
Query: 96 MIQDWCVEN 104
++ + EN
Sbjct: 275 VVDSFIAEN 283
>ZFIN|ZDB-GENE-030131-2963 [details] [associations]
symbol:stub1 "STIP1 homology and U-Box containing
protein 1" species:7955 "Danio rerio" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0030544 "Hsp70 protein
binding" evidence=ISS] [GO:0030911 "TPR domain binding"
evidence=ISS] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=ISS] [GO:0046332 "SMAD binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0051879 "Hsp90 protein
binding" evidence=ISS] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=ISS] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=ISS] InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00504 ZFIN:ZDB-GENE-030131-2963 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR013105 Pfam:PF07719 GO:GO:0000151
GeneTree:ENSGT00650000093277 EMBL:CT573356 IPI:IPI00499851
Ensembl:ENSDART00000145075 Bgee:F1Q8K3 Uniprot:F1Q8K3
Length = 287
Score = 116 (45.9 bits), Expect = 0.00039, P = 0.00039
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P++ IS +LM++P +GITYDR++IE+ + G+ PVT LT + IPN +
Sbjct: 212 PDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQDQLIPNLAM 270
Query: 94 RRMIQDWCVEN 104
+ +I + EN
Sbjct: 271 KEVIDAFIQEN 281
>UNIPROTKB|F1MUH4 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 GeneTree:ENSGT00650000093277
EMBL:DAAA02057282 IPI:IPI00714977 Ensembl:ENSBTAT00000057514
ArrayExpress:F1MUH4 Uniprot:F1MUH4
Length = 302
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P++ IS +LM++P +GITYDR++IE+ + G+ PVT LT + IPN +
Sbjct: 228 PDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQEQLIPNLAM 286
Query: 94 RRMIQDWCVEN 104
+ +I + EN
Sbjct: 287 KEVIDAFISEN 297
>UNIPROTKB|Q9UNE7 [details] [associations]
symbol:STUB1 "E3 ubiquitin-protein ligase CHIP"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;IMP;TAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000209 "protein polyubiquitination"
evidence=IDA;IMP] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0051879 "Hsp90
protein binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030544 "Hsp70 protein binding" evidence=IDA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IDA] [GO:0031943 "regulation of glucocorticoid metabolic
process" evidence=IDA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0030911 "TPR domain binding" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=TAS] [GO:0051604
"protein maturation" evidence=TAS] [GO:0031371 "ubiquitin
conjugating enzyme complex" evidence=TAS] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0046332 "SMAD binding" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=TAS] [GO:0042405 "nuclear
inclusion body" evidence=IDA] [GO:0051787 "misfolded protein
binding" evidence=IDA] [GO:0071218 "cellular response to misfolded
protein" evidence=IDA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IDA] [GO:0090035
"positive regulation of chaperone-mediated protein complex
assembly" evidence=IDA] [GO:0019900 "kinase binding" evidence=IPI]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0042803
Pathway_Interaction_DB:alphasynuclein_pathway GO:GO:0043161
GO:GO:0006281 GO:GO:0030674 EMBL:CH471112 Gene3D:1.25.40.10
GO:GO:0046332 GO:GO:0007179 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0051879 GO:GO:0032436
GO:GO:0051604 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0030512 GO:GO:0042405 GO:GO:0071218 GO:GO:0030544
GO:GO:0034450 EMBL:AE006464 HOGENOM:HOG000163725 KO:K09561
CTD:10273 eggNOG:COG5113 HOVERGEN:HBG053046 OrthoDB:EOG4Z36F9
EMBL:AF039689 EMBL:AF129085 EMBL:AF432221 EMBL:AF217968 EMBL:Z92544
EMBL:BC007545 EMBL:BC017178 EMBL:BC022788 EMBL:BC063617
IPI:IPI00025156 IPI:IPI00645380 RefSeq:NP_005852.2
UniGene:Hs.592081 ProteinModelPortal:Q9UNE7 SMR:Q9UNE7
DIP:DIP-29752N IntAct:Q9UNE7 MINT:MINT-1132706 STRING:Q9UNE7
PhosphoSite:Q9UNE7 DMDM:78099173 PaxDb:Q9UNE7 PRIDE:Q9UNE7
DNASU:10273 Ensembl:ENST00000219548 Ensembl:ENST00000564370
Ensembl:ENST00000565677 GeneID:10273 KEGG:hsa:10273 UCSC:uc002cit.3
GeneCards:GC16P000736 H-InvDB:HIX0012661 HGNC:HGNC:11427 MIM:607207
neXtProt:NX_Q9UNE7 PharmGKB:PA36227 InParanoid:Q9UNE7 OMA:QENELHS
PhylomeDB:Q9UNE7 GenomeRNAi:10273 NextBio:38918 Bgee:Q9UNE7
CleanEx:HS_STUB1 Genevestigator:Q9UNE7 GermOnline:ENSG00000103266
GO:GO:0031371 GO:GO:0051787 GO:GO:0030911 GO:GO:0090035
GO:GO:0031943 GO:GO:0030579 Uniprot:Q9UNE7
Length = 303
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P++ IS +LM++P +GITYDR++IE+ + G+ PVT LT + IPN +
Sbjct: 228 PDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQEQLIPNLAM 286
Query: 94 RRMIQDWCVEN 104
+ +I + EN
Sbjct: 287 KEVIDAFISEN 297
>UNIPROTKB|F1RG35 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070534 "protein
K63-linked ubiquitination" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0051787 "misfolded protein binding" evidence=IEA]
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042405 "nuclear inclusion body" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031398
"positive regulation of protein ubiquitination" evidence=IEA]
[GO:0030911 "TPR domain binding" evidence=IEA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
[GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0043161
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0032436 GO:GO:0000151
GO:GO:0070534 GO:GO:0051865 GO:GO:0042405 GO:GO:0071218
GO:GO:0034450 KO:K09561 OMA:QENELHS GO:GO:0090035 GO:GO:0031943
GO:GO:0030579 GeneTree:ENSGT00650000093277 EMBL:FP016225
RefSeq:XP_003124756.2 Ensembl:ENSSSCT00000008776 GeneID:100511251
KEGG:ssc:100511251 Uniprot:F1RG35
Length = 303
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P++ IS +LM++P +GITYDR++IE+ + G+ PVT LT + IPN +
Sbjct: 228 PDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQEQLIPNLAM 286
Query: 94 RRMIQDWCVEN 104
+ +I + EN
Sbjct: 287 KEVIDAFISEN 297
>MGI|MGI:1891731 [details] [associations]
symbol:Stub1 "STIP1 homology and U-Box containing protein 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0000209 "protein polyubiquitination"
evidence=ISO;IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006457 "protein folding" evidence=TAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=ISO;IMP] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=TAS] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019900 "kinase binding" evidence=ISO] [GO:0030544 "Hsp70
protein binding" evidence=ISO;ISS;TAS] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=ISO]
[GO:0030674 "protein binding, bridging" evidence=TAS] [GO:0030911
"TPR domain binding" evidence=ISO;ISS] [GO:0031072 "heat shock
protein binding" evidence=TAS] [GO:0031371 "ubiquitin conjugating
enzyme complex" evidence=TAS] [GO:0031398 "positive regulation of
protein ubiquitination" evidence=ISO;ISS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IPI] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=ISO;ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;ISS] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IDA] [GO:0042405
"nuclear inclusion body" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO;IMP]
[GO:0046332 "SMAD binding" evidence=ISO] [GO:0051604 "protein
maturation" evidence=TAS] [GO:0051787 "misfolded protein binding"
evidence=ISO] [GO:0051865 "protein autoubiquitination"
evidence=ISO] [GO:0051879 "Hsp90 protein binding" evidence=ISO;ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO]
[GO:0071218 "cellular response to misfolded protein"
evidence=ISO;IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
UniPathway:UPA00143 MGI:MGI:1891731 GO:GO:0005737 GO:GO:0042803
GO:GO:0006457 GO:GO:0043161 GO:GO:0006281 GO:GO:0030674
Gene3D:1.25.40.10 GO:GO:0046332 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515 GO:GO:0051879
GO:GO:0032436 GO:GO:0051604 GO:GO:0000151 GO:GO:0070534
GO:GO:0051865 GO:GO:0042405 GO:GO:0071218 GO:GO:0030544
BRENDA:6.3.2.19 GO:GO:0034450 eggNOG:NOG260504 HOGENOM:HOG000163725
KO:K09561 CTD:10273 HOVERGEN:HBG053046 OrthoDB:EOG4Z36F9
OMA:QENELHS GO:GO:0031371 GO:GO:0030911 GO:GO:0090035 GO:GO:0031943
GO:GO:0030579 EMBL:AF129086 EMBL:AK002752 EMBL:AK004464
EMBL:AK045776 EMBL:AK166630 EMBL:BC027427 EMBL:BC038939
IPI:IPI00471361 RefSeq:NP_062693.1 UniGene:Mm.277599 PDB:2C2L
PDB:2C2V PDB:3Q47 PDB:3Q49 PDB:3Q4A PDBsum:2C2L PDBsum:2C2V
PDBsum:3Q47 PDBsum:3Q49 PDBsum:3Q4A ProteinModelPortal:Q9WUD1
SMR:Q9WUD1 DIP:DIP-29751N IntAct:Q9WUD1 STRING:Q9WUD1
PhosphoSite:Q9WUD1 PaxDb:Q9WUD1 PRIDE:Q9WUD1
Ensembl:ENSMUST00000044911 GeneID:56424 KEGG:mmu:56424
UCSC:uc008bcf.1 GeneTree:ENSGT00650000093277 InParanoid:Q9WUD1
EvolutionaryTrace:Q9WUD1 NextBio:312582 Bgee:Q9WUD1
CleanEx:MM_STUB1 Genevestigator:Q9WUD1
GermOnline:ENSMUSG00000039615 Uniprot:Q9WUD1
Length = 304
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P++ IS +LM++P +GITYDR++IE+ + G+ PVT LT + IPN +
Sbjct: 229 PDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQEQLIPNLAM 287
Query: 94 RRMIQDWCVEN 104
+ +I + EN
Sbjct: 288 KEVIDAFISEN 298
>RGD|1306167 [details] [associations]
symbol:Stub1 "STIP1 homology and U-box containing protein 1, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA;ISO]
[GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process"
evidence=IEA;ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019900 "kinase binding" evidence=IEA;ISO] [GO:0030544 "Hsp70
protein binding" evidence=IEA;ISO] [GO:0030579 "ubiquitin-dependent
SMAD protein catabolic process" evidence=IEA;ISO] [GO:0030911 "TPR
domain binding" evidence=IEA;ISO] [GO:0031398 "positive regulation
of protein ubiquitination" evidence=IEA;ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA;ISO] [GO:0031943 "regulation
of glucocorticoid metabolic process" evidence=IEA;ISO] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO] [GO:0042405
"nuclear inclusion body" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0046332 "SMAD binding" evidence=IEA;ISO]
[GO:0051787 "misfolded protein binding" evidence=IEA;ISO]
[GO:0051865 "protein autoubiquitination" evidence=IEA;ISO]
[GO:0051879 "Hsp90 protein binding" evidence=IEA;ISO] [GO:0070534
"protein K63-linked ubiquitination" evidence=IEA;ISO] [GO:0071218
"cellular response to misfolded protein" evidence=IEA;ISO]
[GO:0090035 "positive regulation of chaperone-mediated protein
complex assembly" evidence=IEA;ISO] InterPro:IPR001440
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 RGD:1306167
GO:GO:0005737 GO:GO:0043161 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515 GO:GO:0032436
EMBL:CH473948 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0042405 GO:GO:0071218 GO:GO:0034450 KO:K09561 CTD:10273
OrthoDB:EOG4Z36F9 OMA:QENELHS GO:GO:0090035 GO:GO:0031943
GO:GO:0030579 GeneTree:ENSGT00650000093277 IPI:IPI00203158
RefSeq:NP_001020796.2 UniGene:Rn.6504 Ensembl:ENSRNOT00000026921
GeneID:287155 KEGG:rno:287155 UCSC:RGD:1306167 NextBio:625631
Uniprot:D4A4T0
Length = 304
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P++ IS +LM++P +GITYDR++IE+ + G+ PVT LT + IPN +
Sbjct: 229 PDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQEQLIPNLAM 287
Query: 94 RRMIQDWCVEN 104
+ +I + EN
Sbjct: 288 KEVIDAFISEN 298
>UNIPROTKB|Q5ZHY5 [details] [associations]
symbol:STUB1 "STIP1 homology and U box-containing protein
1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0071218 "cellular response to misfolded
protein" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=ISS] [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0042803
GO:GO:0043161 GO:GO:0006281 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006515 GO:GO:0000209 GO:GO:0000151
GO:GO:0071218 GO:GO:0034450 KO:K09561 EMBL:AJ720999 IPI:IPI00600865
RefSeq:NP_001026577.1 UniGene:Gga.6217 ProteinModelPortal:Q5ZHY5
SMR:Q5ZHY5 IntAct:Q5ZHY5 STRING:Q5ZHY5 GeneID:426918
KEGG:gga:426918 CTD:10273 eggNOG:COG5113 HOVERGEN:HBG053046
InParanoid:Q5ZHY5 OrthoDB:EOG4Z36F9 NextBio:20828310 Uniprot:Q5ZHY5
Length = 314
Score = 116 (45.9 bits), Expect = 0.00047, P = 0.00047
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P++ IS +LM++P +GITYDR++IE+ + G+ PVT LT + IPN +
Sbjct: 239 PDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQDQLIPNLAM 297
Query: 94 RRMIQDWCVEN 104
+ +I + EN
Sbjct: 298 KEVIDAFISEN 308
>UNIPROTKB|E1B7G3 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070534 "protein
K63-linked ubiquitination" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0051787 "misfolded protein binding" evidence=IEA]
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042405 "nuclear inclusion body" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031398
"positive regulation of protein ubiquitination" evidence=IEA]
[GO:0030911 "TPR domain binding" evidence=IEA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
[GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0043161
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0032436 GO:GO:0000151
GO:GO:0070534 GO:GO:0051865 GO:GO:0042405 GO:GO:0071218
GO:GO:0034450 OMA:QENELHS GO:GO:0090035 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 EMBL:DAAA02057282 IPI:IPI00714977
Ensembl:ENSBTAT00000025473 ArrayExpress:E1B7G3 Uniprot:E1B7G3
Length = 319
Score = 116 (45.9 bits), Expect = 0.00049, P = 0.00049
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P++ IS +LM++P +GITYDR++IE+ + G+ PVT LT + IPN +
Sbjct: 228 PDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQEQLIPNLAM 286
Query: 94 RRMIQDWCVEN 104
+ +I + EN
Sbjct: 287 KEVIDAFISEN 297
>TAIR|locus:2204700 [details] [associations]
symbol:AT1G77460 "AT1G77460" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR000008 InterPro:IPR008973 InterPro:IPR016024
Pfam:PF00168 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SMART:SM00239 EMBL:CP002684 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 InterPro:IPR018029 SUPFAM:SSF49562
PROSITE:PS50004 IPI:IPI00548388 RefSeq:NP_001185419.1
RefSeq:NP_177870.2 UniGene:At.34473 PRIDE:F4I718
EnsemblPlants:AT1G77460.1 EnsemblPlants:AT1G77460.2 GeneID:844082
KEGG:ath:AT1G77460 OMA:VAPSKEC Uniprot:F4I718
Length = 2136
Score = 126 (49.4 bits), Expect = 0.00049, P = 0.00049
Identities = 68/282 (24%), Positives = 114/282 (40%)
Query: 157 SDRNKRCIVDNGAVSVLAEAFETFSKTCLD--ENVSVLEEILSTLTLLFPLAGEGLTYLG 214
SD K+C+ D G V L EA SK C+ S+ E L +F + YLG
Sbjct: 288 SDEAKKCVKDAGGVHALIEAIVAPSKECMQGKHGQSLQEHATGALANVFGGMRHLIIYLG 347
Query: 215 SASSMRCMVWFLKSGD-LSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEP-LFKLIKEP 272
S + + GD + A+++ ++ SS++ + D IE L KL+K
Sbjct: 348 QVSQSPRLTEPI--GDVIGALAYALMIFKQPESSEN-----IFD-PSVIESILVKLLK-- 397
Query: 273 ICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRSLCEKALSVLDG 332
P TK + + S D +L+ ++ A + E+ + L G
Sbjct: 398 --PRDTKLIQERILEAMASLYGNSSLSCYLDDAEAKRVLIALITMASADVRERLIICLSG 455
Query: 333 LCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKNEEREEKTAFAEALQ 392
LC G +A + + + S+ E+AV +L K+ + + K A A
Sbjct: 456 LCHDKVGIWEAIGKREGIQLFISFLGLSSEQHQEYAVEML-KILTAQVDDSKWAVTAA-- 512
Query: 393 VGAFQKLLLLLQVGCADKTKEHVSELLKLLNPHRARL-ECID 433
G L+ LL+ G + K KE + +L L H + +C++
Sbjct: 513 -GGIPPLVQLLETG-SQKAKEDAACILWNLCCHSEEIRDCVE 552
>DICTYBASE|DDB_G0293212 [details] [associations]
symbol:DDB_G0293212 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003613 Pfam:PF04564
SMART:SM00382 SMART:SM00504 dictyBase:DDB_G0293212 GO:GO:0005524
EMBL:AAFI02000200 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0017111 GO:GO:0004842 GO:GO:0000151 eggNOG:COG0507
InterPro:IPR010285 Pfam:PF05970 RefSeq:XP_629245.1
ProteinModelPortal:Q54C21 EnsemblProtists:DDB0191825 GeneID:8629127
KEGG:ddi:DDB_G0293212 InParanoid:Q54C21 OMA:RNANQEN
ProtClustDB:CLSZ2429302 Uniprot:Q54C21
Length = 846
Score = 121 (47.7 bits), Expect = 0.00059, P = 0.00059
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 32 TTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVL-TSFEPIPN 90
T P +F CPIS +M+ P G T++R +I +W + G I+ VT R TS IPN
Sbjct: 771 TIPIYFLCPISQKIMEHPYVAPDGYTFERSSILEWFDKRGAISF-VTKRPFSTSAILIPN 829
Query: 91 HTIRRMIQDW 100
++ IQ+W
Sbjct: 830 RNLKAQIQEW 839
>ASPGD|ASPL0000001660 [details] [associations]
symbol:AN5906 species:162425 "Emericella nidulans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00504
EMBL:BN001301 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000163725
OMA:QENELHS EnsemblFungi:CADANIAT00007127 Uniprot:C8UZU5
Length = 293
Score = 113 (44.8 bits), Expect = 0.00089, P = 0.00089
Identities = 24/83 (28%), Positives = 47/83 (56%)
Query: 23 VESGGEM-ELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRV 81
+ S GE+ E P++ PI+ ++M DPV + +G ++DR I K++ + G P+T
Sbjct: 207 IASKGEIQERIVPDYLVDPITFEIMHDPVIVPSGTSFDRIGILKYVEQSG--VDPITRTP 264
Query: 82 LTSFEPIPNHTIRRMIQDWCVEN 104
+T + PN+ ++ +D+ +N
Sbjct: 265 MTVNDLRPNYALKAACEDFLTKN 287
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 444 427 0.00085 118 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 81
No. of states in DFA: 623 (66 KB)
Total size of DFA: 268 KB (2142 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.20u 0.09s 34.29t Elapsed: 00:00:02
Total cpu time: 34.21u 0.09s 34.30t Elapsed: 00:00:02
Start: Mon May 20 18:19:30 2013 End: Mon May 20 18:19:32 2013