BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038250
(444 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/426 (46%), Positives = 296/426 (69%), Gaps = 17/426 (3%)
Query: 24 ESGGEMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLT 83
ES E E+T P F+CPIS+DLMKDPV +STGITYDR +IE WI+ GN TCPVTN VLT
Sbjct: 22 ESEPESEITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWIN-SGNKTCPVTNTVLT 80
Query: 84 SFEPIPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAGC 143
+F+ IPNHTIR+MIQ WCVE S I+RIPTPR+P+ EV+EI+ +++A + D C
Sbjct: 81 TFDQIPNHTIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKC 140
Query: 144 RDLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVS-VLEEILSTLTLL 202
++ KIKK ES++N++C+ +N VL + F+ FS DE ++ +L EILS LT +
Sbjct: 141 GVIIEKIKKLGDESEKNRKCVNENSVGWVLCDCFDKFSG---DEKLTFMLNEILSLLTWM 197
Query: 203 FPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAI 262
FP+ EG++ L SA+S RC+ LKS D S R+NA +++EI+S D +V+ G
Sbjct: 198 FPIGLEGISKLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVENGVA 257
Query: 263 EPLFKLIKEPICPTATKASLVVVYRTITSASATEKP--IQKFVDMGLVSLLLEMLVDAQR 320
E L KLI++ + ++TK+SL+ +Y+ + +KP +F+++GLVS+ +EM+VDA+
Sbjct: 258 EALVKLIRDSVSSSSTKSSLIAIYQMV-----LQKPEIASEFLEIGLVSITVEMIVDAEN 312
Query: 321 SLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKNEE 380
S+CEKAL+VLD +C +++GR + N+L+ P++VKKI +VS+LAT ++S++ KL K
Sbjct: 313 SVCEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKT-- 370
Query: 381 REEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLNPHRARL-ECIDSM-DFK 438
A +A+++GAFQK+LL+LQVG ++TKE +ELLK++N + +C+DS+ +FK
Sbjct: 371 -GNTVAVEDAVRLGAFQKVLLVLQVGYGEETKEKATELLKMMNTQMKLMSDCVDSLKEFK 429
Query: 439 DLKRPF 444
+K+PF
Sbjct: 430 YIKKPF 435
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 340 bits (872), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 190/442 (42%), Positives = 283/442 (64%), Gaps = 29/442 (6%)
Query: 12 RGRRAGKKQ--PGVESGGEMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHE 69
RG KK+ P E+E+T P+ F+CPIS +LMKDPV +++GITYDRENIEKW E
Sbjct: 10 RGGSVSKKEIIPVTSCSEEVEITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWF-E 68
Query: 70 DGNITCPVTNRVLTSFEPIPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINC 129
G TCPVTN VLTS E IPNHTIRRMIQ WC + GIERIPTPR+PV+S +V EI
Sbjct: 69 SGYQTCPVTNTVLTSLEQIPNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICE 128
Query: 130 NITTACKSEDQAGCRDLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENV 189
++ A + D A C ++V K+ + KES+RN++C+ +NGA VL F+ FS+ + N
Sbjct: 129 RLSAATRRGDYAACMEMVTKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSE---NANA 185
Query: 190 S-VLEEILSTLTLLFPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSD 248
S +LEE +S LT + P+ EG + L + SS +V L++GD +NA +++E++ +
Sbjct: 186 SLLLEETVSVLTWMLPIGLEGQSKLTTTSSFNRLVELLRNGD----QNAAFLIKELLELN 241
Query: 249 HRKVNVLLDIEGAIEPLFKLI-KEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGL 307
V+ L I G E K I ++ C SL+ ++ I + T + +F+++ L
Sbjct: 242 VTHVHALTKINGVQEAFMKSINRDSTCVN----SLISIHHMILTNQET---VSRFLELDL 294
Query: 308 VSLLLEMLVDAQRSLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEF 367
V++ +EMLVD++ S+CEKAL+VL+ +C + GR N L+ P++VKKIL++S+ +
Sbjct: 295 VNITVEMLVDSENSVCEKALTVLNVICETKEGREKVRRNKLVIPILVKKILKISE--KKD 352
Query: 368 AVSILWKLCKNEEREEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLNPHRA 427
VS++WK+CK+ + E EAL++GAF+KL+++LQVGC + TKE V+ELLK++N
Sbjct: 353 LVSVMWKVCKSGDGSE---VEEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMMNKVMK 409
Query: 428 RLECID-----SMDFKDLKRPF 444
+D S++FK +K+PF
Sbjct: 410 MNGFVDRSYSSSIEFKHVKKPF 431
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 202 bits (515), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 217/412 (52%), Gaps = 38/412 (9%)
Query: 25 SGGEM--ELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVL 82
SGG M E+ P F CPISL++MKDPV +STGITYDR++IEKW+ +CPVT + +
Sbjct: 2 SGGIMDEEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDI 61
Query: 83 TSFEPIPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAG 142
T + PNHT+RR+IQ WC N SYG+ERIPTPR P+ E+ ++ + +A E+Q
Sbjct: 62 TDADLTPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRD--SASSHENQVK 119
Query: 143 CRDLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLL 202
C + ++++ E+ NKRC+ G LA S EN S+ +E L LL
Sbjct: 120 C---LKRLRQIVSENATNKRCLEAAGVPEFLANIVSNDS-----ENGSLTDE---ALNLL 168
Query: 203 FPLAGEGLTYLGSASS------MRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLL 256
+ L ++ ++ + ++ G R A L+L+ I+ ++ L
Sbjct: 169 YHLETSETVLKNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTL 228
Query: 257 DIEGAIEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLV 316
E E + +++ + I ATKA++ + + + + K V+ G++S+++E+L+
Sbjct: 229 KPEVFTE-VVQILDDRISQKATKAAMHI----LVNICPWGRNRHKAVEAGVISVIIELLM 283
Query: 317 D----AQRSLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSIL 372
D ++R E A+ VLD LC GR + N+ V+ KKILRVS A++ AV +L
Sbjct: 284 DESFTSERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVL 343
Query: 373 W---KLCKNEEREEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKL 421
+ C E LQ+G KL L+LQV C KTKE ELLKL
Sbjct: 344 LSVGRFCAT-----PALLHEMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKL 390
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/388 (32%), Positives = 205/388 (52%), Gaps = 17/388 (4%)
Query: 28 EMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEP 87
++ + P HFRCPISL+LM+DPVT+ TG TYDR +IE W+ N TCPVT L+ F
Sbjct: 9 DLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTL 68
Query: 88 IPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAGCR-DL 146
IPNHT+RR+IQ+WCV NRS G+ERIPTP+ P V + + + R
Sbjct: 69 IPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAA 128
Query: 147 VAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLA 206
+ +++ + ++SD+N+ I + A +L + FS+T E VS +L L + P
Sbjct: 129 LRRLRGFARDSDKNRVLIAAHNATEILIKIL--FSETTSSELVSESLALLVMLPITEP-- 184
Query: 207 GEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNV---LLDIEGAIE 263
+ ++ + + L + R NA ++ EIVS+ + ++ + + E E
Sbjct: 185 NQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALI-EIVSTGTKSADLKGSISNSESVFE 243
Query: 264 PLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEML-VDAQRSL 322
+ L++ PI +++ +L + +T+ + + + + G +L++ L D R
Sbjct: 244 GVLDLLRNPI---SSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCD 300
Query: 323 CEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKNEERE 382
E+AL+ ++ LC + G ++L P++VK ILRVSD ATE+A L LC EER
Sbjct: 301 TERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCTAEERW 360
Query: 383 EKTAFAEALQVGAFQKLLLLLQVGCADK 410
+ EA G +LLL++Q C ++
Sbjct: 361 RE----EAAGAGVVVQLLLMVQSECTER 384
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/433 (32%), Positives = 229/433 (52%), Gaps = 59/433 (13%)
Query: 28 EMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEP 87
+ E+ P+ F CPISLD+MKDPV +STGITYDRE+IEKW+ +CPVT +V+T +
Sbjct: 2 DQEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDL 61
Query: 88 IPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSE-DQAGCRDL 146
PNHT+RR+IQ WC N SYGIERIPTP+ P+ E+ ++ I + S +Q C
Sbjct: 62 TPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKL---IKESSSSHLNQVKC--- 115
Query: 147 VAKIKKWTKESDRNKRCI----VDNGAVSVLAEAFETF---------------------- 180
+ ++++ E+ NKRC+ V ++++ + +T+
Sbjct: 116 LKRLRQIVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLE 175
Query: 181 -----SKTCLDENVSVLEEILSTLTLLFPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRR 235
S++ +DE +SVL + ++ T L L L + ++ + ++ G R
Sbjct: 176 NRFDSSRSLMDEALSVLYHLDTSETALKSL----LNNKKGTNLVKTLTKIMQRGIYESRA 231
Query: 236 NAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLIKEPICPTATKASLVVVYRTITSASAT 295
A L+L++++ +LL+ E E + +++ + I AT++++ ++ IT
Sbjct: 232 YAALLLKKLLEVADPMQIILLERELFGE-VIQILHDQISHKATRSAMQIL--VITCPWGR 288
Query: 296 EKPIQKFVDMGLVSLLLEMLVD----AQRSLCEKALSVLDGLCSSDYGRGDAYNNSLIFP 351
+ K V+ G +S+++E+L+D ++R E A+ VLD LC GR + N+
Sbjct: 289 NR--HKAVEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIA 346
Query: 352 VIVKKILRVSDLATEFAVSILW---KLCKNEEREEKTAFAEALQVGAFQKLLLLLQVGCA 408
V+ KKILRVS + +E AV +L + C + E LQ+G KL L+LQV C
Sbjct: 347 VVSKKILRVSQITSERAVRVLLSVGRFCAT-----PSLLQEMLQLGVVAKLCLVLQVSCG 401
Query: 409 DKTKEHVSELLKL 421
+KTKE ELLKL
Sbjct: 402 NKTKEKAKELLKL 414
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 184 bits (468), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 141/424 (33%), Positives = 209/424 (49%), Gaps = 17/424 (4%)
Query: 21 PGVESGGEMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNR 80
PG ++ + P HFRCPISLDLM DPVT+STG TYDR +I+ WI GN TCPVT
Sbjct: 2 PGNLEPLDLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAM-GNTTCPVTRV 60
Query: 81 VLTSFEPIPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQ 140
L+ F IPNHT+RR+IQ+WCV NRS G+ERIPTP+ P + V + + +
Sbjct: 61 ALSDFTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVS 120
Query: 141 AGCR-DLVAKIKKWTKESDRNKRCIVDNGAVSVLAEA-FETFSKTCLDENVSVLEEILST 198
R + +++ ++S++N+ I + A +L F T L + L
Sbjct: 121 VRSRAAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLAL-- 178
Query: 199 LTLLFPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDI 258
L LL E S + M L + R NA ++ E+V + + +++ L I
Sbjct: 179 LVLLHMTETECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALI-EMVLTGAKSMDLKLII 237
Query: 259 EGA---IEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEML 315
G+ E + L+K PI +++ +L + + I + ++ + G +L++ L
Sbjct: 238 SGSDSIFEGVLDLLKNPI---SSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRL 294
Query: 316 -VDAQRSLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWK 374
D R E+ L+ ++ LC G ++L P++VK ILRVSD ATE+A L
Sbjct: 295 AADFDRCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLA 354
Query: 375 LCKNEEREEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLNPHRARLECIDS 434
LC EER EA G +LLLL+Q C ++ K LLKLL + S
Sbjct: 355 LCTAEERCRD----EAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTVHS 410
Query: 435 MDFK 438
DF
Sbjct: 411 DDFN 414
>sp|Q9SF15|PUB24_ARATH E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24
PE=1 SV=1
Length = 456
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/447 (28%), Positives = 214/447 (47%), Gaps = 53/447 (11%)
Query: 28 EMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLT-SFE 86
E E+ PN+F CPISL++MKDPVT +GITYDR+NI KW+ + +CPVT + L +
Sbjct: 5 EEEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEKVP--SCPVTKQPLPLDSD 62
Query: 87 PIPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAGCRDL 146
PNH +RR+IQ WCVEN + G+ RI TPR+P + V E N+ ++ G +
Sbjct: 63 LTPNHMLRRLIQHWCVENETRGVVRISTPRVPPGKLNVVEEIKNLKKF--GQEALGREET 120
Query: 147 VAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDEN------VSVLEEILSTLT 200
+ K++ + + N+R + + G + ++ F C E+ + L+E L L
Sbjct: 121 LQKLEVLAMDGN-NRRLMCECG----VHKSLILFVVKCTSEDEDGRRRIKGLDESLRLLH 175
Query: 201 LLFPLAGEGLTYLGSASS-MRCMVWFLKSGDLSRRRNAVLVLREIV--SSDH--RKVN-- 253
L+ + + T L M + W L D + +++LR + +S H ++N
Sbjct: 176 LIGIPSNDAKTILMENDRVMESLTWVLHQEDFLSKAYTIVLLRNLTEYTSSHIVERLNPE 235
Query: 254 -------VLLDIEGAIEPLFKLIKEPICPTATKASL-----------VVVYRTITSA--- 292
L D+ ++ ++E + ++++ SL +V+ + +T+A
Sbjct: 236 IFKGIIGFLKDVVNSVNRTSPTVRETV-QSSSRPSLGKTEPSKLDHSLVIKQAVTAALMI 294
Query: 293 ----SATEKPIQKFVDMGLVSLLLEMLVD--AQRSLCEKALSVLDGLCSSDYGRGDAYNN 346
S+ + VD+G VS L+E+ + ++ + E L VL LC GR + +
Sbjct: 295 LLETSSWSRNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANGRAEILAH 354
Query: 347 SLIFPVIVKKILRVSDLATEFAVSILWKLCKNEEREEKTAFAEALQVGAFQKLLLLLQVG 406
V+ K++LRVS A + A+SIL + K E E + VG +KL +L +
Sbjct: 355 RGGIAVVTKRLLRVSPAADDRAISILTTVSKFS--PENMVVEEMVNVGTVEKLCSVLGMD 412
Query: 407 CADKTKEHVSELLKLLNPHRARLECID 433
C KE E+LK + CID
Sbjct: 413 CGLNLKEKAKEILKDHFDEWKKFPCID 439
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 131 bits (330), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 199/400 (49%), Gaps = 30/400 (7%)
Query: 32 TTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNH 91
T P F+CPISLD+MK PV+LSTG+TYDR +I++W+ +DGN TCP T ++L + E +PN
Sbjct: 10 TVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWL-DDGNNTCPATMQILQNKEFVPNL 68
Query: 92 TIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVF-EINCNITTACKSEDQAGCRDLVAKI 150
T+ R+I W S I R P S EIN I + E+ A +KI
Sbjct: 69 TLHRLIDHW-----SDSINRRADSESPESDTPTRDEINAAIERF-RIENDAR-----SKI 117
Query: 151 KKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFP--LAGE 208
++ +ESD N+ + + + S+ D + ++ E + L+++
Sbjct: 118 LRFARESDENREFLAGKDDFVAMLVDLISDSRNFSDSQLLLVGEAVKILSMIRRKIFDRR 177
Query: 209 GLTYLGSASSMRCMVWF---LKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPL 265
L+ L + C+ F +K G+ + + VL E ++ D ++ EG + +
Sbjct: 178 RLSNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVL-EFIAVDAESKLIIAKGEGLVTEI 236
Query: 266 FKLIKEPICPTATKASLVVVYRTITSASATEKPIQ-KFVDMGLVSLLLEMLVD--AQRSL 322
KLI + +A+L ++ A A+ K ++ + LV+ L +L D S+
Sbjct: 237 IKLISSDSDSSLIEANLSLLI-----AIASSKRVKLALIREKLVTKLTSLLTDPTTSVSV 291
Query: 323 CEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKNEERE 382
EK L +L+ + S GR + + + +V K+++VS ATE AV++LW +C +
Sbjct: 292 TEKCLKLLEAISSCKEGRSEICDGVCV-ETVVNKLMKVSTAATEHAVTVLWSVCY--LFK 348
Query: 383 EKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLL 422
EK A +++ K+LLLLQ C+ + +++LLK+
Sbjct: 349 EKKAQDAVIRINGVTKILLLLQSNCSLTVRHMLTDLLKVF 388
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 191/394 (48%), Gaps = 25/394 (6%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P+ F CPISL+ M+DPVTL TG TY+R NI KW + G++TCP T + L PN T+
Sbjct: 65 PSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNL-GHLTCPTTMQELWDDTVTPNKTL 123
Query: 94 RRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAGCRDLVAKIKKW 153
+I W ++ Y + + + + ++E+ + T K++ QA L +++K+
Sbjct: 124 HHLIYTWF--SQKYVLMKKRSEDVQGRAIEI------LGTLKKAKGQARVHAL-SELKQI 174
Query: 154 TKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLAGEGLTYL 213
++ +V+ G VSV++ F+ +V E+++ L L L + + L
Sbjct: 175 VIAHLMARKTVVEEGGVSVISSLLGPFTSH------AVGSEVVAILVSL-DLDSDSKSGL 227
Query: 214 GSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLIKEPI 273
+ + +V L G + N ++R +V + L+ + L +L+K+
Sbjct: 228 MQPAKVSLIVDMLNDGSNETKINCARLIRGLVEEKGFRAE-LVSSHSLLVGLMRLVKDKR 286
Query: 274 CPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRSLCEKALSVLDGL 333
+L R + S ++ V +G V L+++L E AL VLD L
Sbjct: 287 HRNGVSPAL----RLLKPISVHKQVRSLMVSIGAVPQLVDILPSLDPECLELALFVLDAL 342
Query: 334 CSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKNEEREEKTAFAEALQV 393
C+ GR +++ P V+ ++RVS+ T +A+SILW +CK E A++V
Sbjct: 343 CTDVEGRVAVKDSANTIPYTVRVLMRVSENCTNYALSILWSVCKLAPEE---CSPLAVEV 399
Query: 394 GAFQKLLLLLQVGCADKTKEHVSELLKLLNPHRA 427
G KLLL++Q GC K+ +ELLKL + H +
Sbjct: 400 GLAAKLLLVIQSGCDAALKQRSAELLKLCSLHYS 433
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 125/434 (28%), Positives = 214/434 (49%), Gaps = 60/434 (13%)
Query: 28 EMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEP 87
E +T P+ F+CPISLD+M+ PV+L TG+TYDR +I++W+ + GN TCP T ++L + +
Sbjct: 7 ETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWL-DGGNNTCPATMQLLKTKDF 65
Query: 88 IPNHTIRRMIQDW--CVENRSYGIERIPTP----RIPVSSVEVFEINCNITTACKSEDQA 141
+PN T++R+I W + R G + P +P E+N + E+
Sbjct: 66 VPNLTLQRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKE----EVNVLLERLMSLEN-- 119
Query: 142 GCRDLVAKIKKWTKESDRNKRCIVDNGA-VSVLAEAFETFSKTCLD---------ENVSV 191
+ KI ++ K+SD N+ + V +L + T KT ++ +++ V
Sbjct: 120 -----LMKIVRFVKDSDSNREFLSKKMEFVPMLVDIIRT-KKTKIELVIMAIRILDSIKV 173
Query: 192 LEEILSTLTLLFPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRK 251
E LS L LA +G + ++ ++ G+L + +V VL + +S D +
Sbjct: 174 DRERLSNLM----LANDG------GDCLTAILLAIQRGNLESKIESVRVL-DWISFDAKS 222
Query: 252 VNVLLDIEGAIEPLFKLIK--EPICPTATKASLVVVY-----RTITSASATEKPIQKFVD 304
++ + +G + + K I E P+ +ASL + + + S K I K D
Sbjct: 223 KLMIAERDGVLTEMMKSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKD 282
Query: 305 MGLVSLLLEMLVDAQRSLCEKALSVLDGLCSSDYGR----GDAYNNSLIFPVIVKKILRV 360
+ LL E L + ++ EK+L +L+ L S GR GD +N +VKK+L+V
Sbjct: 283 I----LLTETLTNV--AVTEKSLKLLETLSSKREGRLEICGD--DNGRCVEGVVKKLLKV 334
Query: 361 SDLATEFAVSILWKLCKNEEREEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLK 420
S ATE AV+ILW LC RE+KT + KLL+++Q C+ ++ +L+K
Sbjct: 335 STTATEHAVTILWCLC-YVFREDKTVEETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIK 393
Query: 421 LLNPHRARLECIDS 434
+L + + L ++
Sbjct: 394 VLKFNSSALAAYET 407
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 166/360 (46%), Gaps = 21/360 (5%)
Query: 25 SGGEMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTS 84
+G +T P+ FRCPISL+LMKDPV +STG TY+R IEKWI G+ TCP T + +++
Sbjct: 265 NGDSRPITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWI-ASGHHTCPTTQQKMST 323
Query: 85 FEPIPNHTIRRMIQDWCVENRSYGIERIPTPRIPV---SSVEVFEINCNITTACKSEDQA 141
PN+ +R +I WC N +R P P SS E I+ ++ C S D
Sbjct: 324 SALTPNYVLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLC-SPDTE 382
Query: 142 GCRDLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTL 201
R A+++ K + N+ CI + GA+ +L + + V+ L L
Sbjct: 383 EQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTAL--------L 434
Query: 202 LFPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGA 261
+ + + S+ ++ +V LK+G + R NA L + D KV + GA
Sbjct: 435 NLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTI--GGMGA 492
Query: 262 IEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRS 321
I L L+ E A+ + I + + + GLV L++ ++ + +
Sbjct: 493 IPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKG-----RAIRAGLVPLIMGLVTNPTGA 547
Query: 322 LCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKNEER 381
L ++A+++L L S G+ A + PV+V+ I + E A +++ LC E
Sbjct: 548 LMDEAMAILSILSSHPEGKA-AIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHH 606
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 166/360 (46%), Gaps = 21/360 (5%)
Query: 25 SGGEMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTS 84
+G +T P+ FRCPISL+LMKDPV +STG TY+R IEKWI G+ TCP T + +++
Sbjct: 265 NGDSRPITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWI-ASGHHTCPTTQQKMST 323
Query: 85 FEPIPNHTIRRMIQDWCVENRSYGIERIPTPRIPV---SSVEVFEINCNITTACKSEDQA 141
PN+ +R +I WC N +R P P SS E I+ ++ C S D
Sbjct: 324 SALTPNYVLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLC-SPDTE 382
Query: 142 GCRDLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTL 201
R A+++ K + N+ CI + GA+ +L + + V+ L L
Sbjct: 383 EQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTAL--------L 434
Query: 202 LFPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGA 261
+ + + S+ ++ +V LK+G + R NA L + D KV + GA
Sbjct: 435 NLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTI--GGMGA 492
Query: 262 IEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRS 321
I L L+ E A+ + I + + + GLV L++ ++ + +
Sbjct: 493 IPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKG-----RAIRAGLVPLIMGLVTNPTGA 547
Query: 322 LCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKNEER 381
L ++A+++L L S G+ A + PV+V+ I + E A +++ LC E
Sbjct: 548 LMDEAMAILSILSSHPEGKA-AIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHH 606
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 125 bits (314), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 193/407 (47%), Gaps = 38/407 (9%)
Query: 28 EMEL-TTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFE 86
E+EL P+ F CPISL+ M+DPVTL TG TY+R NI KW + G+ TCP T + L
Sbjct: 54 ELELPEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFN-IGHCTCPTTMQELWDDL 112
Query: 87 PIPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAGCRDL 146
PN T+ ++I W ++ Y + + + + ++E+ + T K++ +A L
Sbjct: 113 VTPNKTLHQLIYTWF--SQKYVLMKKRSEDVQGRAIEI------LGTLRKAKGKAKVHAL 164
Query: 147 VAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCL-DENVSVLEEILSTLTLLFPL 205
+++K+ K+ +VD G V V++ F+ + E +++L + L
Sbjct: 165 -SELKQVVMAHAIAKKTVVDEGGVFVISSLLSPFTSHAVGSEAIAILVNL--------EL 215
Query: 206 AGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPL 265
+ L + + MV L G + + N ++ +V + L+ + L
Sbjct: 216 DSDSKAGLMQPARVSLMVDMLNDGSIETKINCARLIGRLVEEKGFRAE-LVSSHSLLVGL 274
Query: 266 FKLIKE-----PICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQR 320
+L+K+ + P T V V++ + + V +G V L+++L
Sbjct: 275 MRLVKDRRRRNGVSPALTLLKSVSVHKQVRNL---------LVRIGAVPQLVDVLPCLDV 325
Query: 321 SLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKNEE 380
E AL VLD LC GR ++ P V+ +++VS+ T +A+SILW +CK
Sbjct: 326 ECLESALFVLDSLCLESEGRIALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVCKLAS 385
Query: 381 REEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLNPHRA 427
E + A++VG KLLL++Q GC K+ +ELLKL + H +
Sbjct: 386 EE---CSSLAVEVGLAAKLLLVIQSGCDPALKQRSAELLKLCSLHYS 429
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 213/434 (49%), Gaps = 54/434 (12%)
Query: 31 LTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPN 90
+T P FRCPISLD+MK PV+L TG+TYDR +I++W+ + GN TCP T ++L + + IPN
Sbjct: 8 ITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWL-DGGNNTCPATMQILQNKDFIPN 66
Query: 91 HTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVF-----EINCNITTACKSEDQAGCRD 145
T++R+I+ W S + R R V S E+ EI I +++ R+
Sbjct: 67 RTLQRLIEIW-----SDSVRR----RTCVESAELAAPTRDEIADAIDRVKIEKEERDDRE 117
Query: 146 LVAKIKKWTKESDRNKRCIV-DNGAVSVLAEA-----FETFSKT---CLDENVSVLEEIL 196
+++KI ++ +ESD N+ + + V +L + FET S + E V +L I
Sbjct: 118 VLSKIVRFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILSTIR 177
Query: 197 STLTLLFPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLL 256
S ++ + LT + +V+ K+G++ + + +L E ++ D ++
Sbjct: 178 SKVSDRRRFSNLILT--NGRDRLSVIVYLFKTGNVELKIDCAGLL-EFIAVDAESKLLIA 234
Query: 257 DIEGAIEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLV 316
+ +G I L K I + + L ++ +++ A P K V + L L +++
Sbjct: 235 ERDGLITELMKSISKD-------SDLSLIESSLSCLIAISSP--KRVKLNL--LREKLIG 283
Query: 317 DAQR-----------SLCEKALSVLDGLCSSDYGRGD-AYNNSLIFPVIVKKILRVSDLA 364
D + S+ EK L +L+ L S+ GR + + +VKK+++VS A
Sbjct: 284 DVTKLLSDSTSSLSVSVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAA 343
Query: 365 TEFAVSILWKLCKNEEREEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLNP 424
TE AV++LW + + +E A V K+LLLLQ C+ + +++LLK+
Sbjct: 344 TEHAVTVLWSV--SYLFKEDKALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLKVFKV 401
Query: 425 HRARLECIDSMDFK 438
+ C+ + D K
Sbjct: 402 NSR--SCLSAYDTK 413
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 187/409 (45%), Gaps = 53/409 (12%)
Query: 31 LTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPN 90
L P FRCPISL+LM DPV +S+G TY+RE I+KW+ E G++TCP T LTS PN
Sbjct: 254 LIPPEEFRCPISLELMTDPVIVSSGQTYERECIKKWL-EGGHLTCPKTQETLTSDIMTPN 312
Query: 91 HTIRRMIQDWCVENRSYGIERIPTPRIPVSSV--------------EVFEINCNITTACK 136
+ +R +I WC N GIE P I S ++ E+ +T+ +
Sbjct: 313 YVLRSLIAQWCESN---GIEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQ-Q 368
Query: 137 SEDQAGCRDLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEIL 196
ED+ R +I+ K+++ N+ I +GA+ +L + + E+ +
Sbjct: 369 PEDR---RSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHA-----VT 420
Query: 197 STLTLLFPLAGEG-LTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVL 255
S L L +G + Y S+ ++ +V L+ G + R NA L + D KV +
Sbjct: 421 SILNLSICQENKGKIVY--SSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTI- 477
Query: 256 LDIEGAIEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEML 315
GAI PL L+ E A+ + I + K V GLV +L+ +L
Sbjct: 478 -GAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKG-----KAVRAGLVPVLMRLL 531
Query: 316 VDAQRSLCEKALSVLDGLCS-----SDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVS 370
+ + + +++LS+L L S S+ G DA PV+V I S E + +
Sbjct: 532 TEPESGMVDESLSILAILSSHPDGKSEVGAADA------VPVLVDFIRSGSPRNKENSAA 585
Query: 371 ILWKLCKNEEREEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELL 419
+L LC ++ EA ++G L+ + + G D+ K ++LL
Sbjct: 586 VLVHLCSWNQQH----LIEAQKLGIMDLLIEMAENGT-DRGKRKAAQLL 629
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 176/401 (43%), Gaps = 46/401 (11%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P+ FRCPISL++M+DPV +S+G TY+R IEKWI E G+ TCP T + LTS PN+ +
Sbjct: 257 PDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWI-EGGHSTCPKTQQALTSTTLTPNYVL 315
Query: 94 RRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTA--------------CKSED 139
R +I WC N IE P P SS+ +++ + A ED
Sbjct: 316 RSLIAQWCEAN---DIE----PPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPED 368
Query: 140 QAGCRDLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTL 199
Q R +I+ K + N+ I + GA+ +L T + +V+ L
Sbjct: 369 Q---RSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTAL------- 418
Query: 200 TLLFPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIE 259
L + + SA ++ +V LK G + R NA L + D KV +
Sbjct: 419 -LNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTI--GAL 475
Query: 260 GAIEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQ 319
GAI PL L+ E A+ + I + K + G++ L +L +
Sbjct: 476 GAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKG-----KAIRAGVIPTLTRLLTEPG 530
Query: 320 RSLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKNE 379
+ ++AL++L L S G+ +S P +V+ I S E A ++L LC +
Sbjct: 531 SGMVDEALAILAILSSHPEGKA-IIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGD 589
Query: 380 EREEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLK 420
+ EA ++G L+ L G D+ K ++LL+
Sbjct: 590 PQH----LVEAQKLGLMGPLIDLAGNGT-DRGKRKAAQLLE 625
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 197/407 (48%), Gaps = 39/407 (9%)
Query: 24 ESGGEMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLT 83
ES +LT P F CP+SL+LMKDPV ++TG TY+R I++WI + GN+TCP T + L
Sbjct: 232 ESKKSDKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWI-DCGNLTCPKTQQKLE 290
Query: 84 SFEPIPNHTIRRMIQDWCVENRSYGIERIPTPRI-----PVSSVEVFEINCNITTACKSE 138
+F PN+ +R +I WC E + IE+ P I + V ++ +E
Sbjct: 291 NFTLTPNYVLRSLISRWCAE---HNIEQ-PAGYINGRTKNSGDMSVIRALVQRLSSRSTE 346
Query: 139 DQAGCRDLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILS- 197
D+ R+ V++I+ +K S N+ I + GA+ VL + E+V+ E ++
Sbjct: 347 DR---RNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTS-------EDVATQENAITC 396
Query: 198 TLTL-LFPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLL 256
L L ++ E + + G+ +S +V L++G + R NA L + +D K +++
Sbjct: 397 VLNLSIYENNKELIMFAGAVTS---IVQVLRAGTMEARENAAATLFSLSLADENK--III 451
Query: 257 DIEGAIEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLV 316
GAI L L+ E P K + ++ + ++ G+V+ L++ML
Sbjct: 452 GGSGAIPALVDLL-ENGTPRGKKDAATALFNLCIYHGNKGRAVR----AGIVTALVKMLS 506
Query: 317 DAQRS-LCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKL 375
D+ R + ++AL++L L ++ + A + P ++ + E A +IL L
Sbjct: 507 DSTRHRMVDEALTILSVLANNQDAKS-AIVKANTLPALIGILQTDQTRNRENAAAILLSL 565
Query: 376 CKNEEREEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLL 422
CK + + T ++GA L+ L + G ++ K LL+LL
Sbjct: 566 CKRDTEKLITIG----RLGAVVPLMDLSKNGT-ERGKRKAISLLELL 607
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 181/408 (44%), Gaps = 55/408 (13%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P+ FRCPISL+LM+DPV +S+G TY+R I+KW+ + G+ TCP T + L+ PN +
Sbjct: 229 PDEFRCPISLELMQDPVIVSSGQTYERSCIQKWL-DSGHKTCPKTQQPLSHTSLTPNFVL 287
Query: 94 RRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSE--DQAGCRDLVAKIK 151
+ +I WC N GIE +P + + N A KS D AG L+ +++
Sbjct: 288 KSLISQWCEAN---GIE------LPKN-----KQNSRDKKAAKSSDYDHAGLVSLMNRLR 333
Query: 152 KWTKESDR---------------NKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEIL 196
++ R N+ CI + GA+ +L + + V+ L
Sbjct: 334 SGNQDEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTAL---- 389
Query: 197 STLTLLFPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLL 256
L + + + ++ +V LK+G + R NA L + D KV +
Sbjct: 390 ----LNLSIHENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTI-- 443
Query: 257 DIEGAIEPLFKLIKEPICPTATKASLVVVYRT-ITSASATEKPIQKFVDMGLVSLLLEML 315
GAI PL L+ + P K + ++ I + + V G+V L+ L
Sbjct: 444 GAAGAIPPLINLLCDG-SPRGKKDAATAIFNLCIYQGNKV-----RAVKAGIVIHLMNFL 497
Query: 316 VDAQRSLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKL 375
VD + ++ALS+L L + G+ S P +V+ I S E A +ILW L
Sbjct: 498 VDPTGGMIDEALSLLSILAGNPEGK-IVIARSEPIPPLVEVIKTGSPRNRENAAAILWLL 556
Query: 376 CKNEEREEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLN 423
C + E+T A+A G L L + G D+ K S +L+L++
Sbjct: 557 CSAD--TEQTLAAKA--AGVEDALKELSETGT-DRAKRKASSILELMH 599
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 115 bits (288), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 186/406 (45%), Gaps = 49/406 (12%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P +FRCPISL+LMKDPV +STG TY+R +I+KW+ + G+ TCP + L PN+ +
Sbjct: 249 PEYFRCPISLELMKDPVIVSTGQTYERSSIQKWL-DAGHKTCPKSQETLLHAGLTPNYVL 307
Query: 94 RRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAGCRDLVAKIKKW 153
+ +I WC N GIE +P + S +I + ++ C D+ L+ K+
Sbjct: 308 KSLIALWCESN---GIE-LPQNQ---GSCRTTKIGGSSSSDC---DRTFVLSLLEKLANG 357
Query: 154 TKESDR---------------NKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILST 198
T E R N+ CI + GA+ +L E + + +V+ L
Sbjct: 358 TTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTAL------ 411
Query: 199 LTLLFPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDI 258
L L +G + A ++ +V LK+G + R NA L + D KV +
Sbjct: 412 LNLSINEGNKG--AIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAG 469
Query: 259 EGAIEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDA 318
AI+ L L++E A+ + I + + + V G+V L +L DA
Sbjct: 470 --AIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKS-----RAVKGGIVDPLTRLLKDA 522
Query: 319 QRSLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLC-K 377
+ ++AL++L L ++ G+ A + PV+V+ I S E A +ILW LC
Sbjct: 523 GGGMVDEALAILAILSTNQEGK-TAIAEAESIPVLVEIIRTGSPRNRENAAAILWYLCIG 581
Query: 378 NEEREEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLN 423
N ER A +VGA L L + G D+ K + LL+L+
Sbjct: 582 NIER-----LNVAREVGADVALKELTENG-TDRAKRKAASLLELIQ 621
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 186/406 (45%), Gaps = 28/406 (6%)
Query: 31 LTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPN 90
LT P F CPISL+LMKDP +STG TY+R I++WI + GN++CP T + L +F PN
Sbjct: 241 LTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWI-DCGNLSCPKTQQKLENFTLTPN 299
Query: 91 HTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITT----ACKSEDQA--GCR 144
+ +R +I WC ++ R S +++ +++ CK Q+ R
Sbjct: 300 YVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDRR 359
Query: 145 DLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFP 204
V++I+ +K S N+ I + GA+ VL + + T EN + L L
Sbjct: 360 TAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENA-----VTCILNLSIY 414
Query: 205 LAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEP 264
+ L L A ++ +V L++G + R NA L + +D K +++ GAI
Sbjct: 415 EHNKELIML--AGAVTSIVLVLRAGSMEARENAAATLFSLSLADENK--IIIGASGAIMA 470
Query: 265 LFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRS-LC 323
L L++ A+ + I + + V G+V L++ML D+ +
Sbjct: 471 LVDLLQYGSVRGKKDAATALFNLCIYQGNKG-----RAVRAGIVKPLVKMLTDSSSERMA 525
Query: 324 EKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKNEEREE 383
++AL++L L S+ + + I P ++ + + E A +IL LCK + +
Sbjct: 526 DEALTILSVLASNQVAKTAILRANAI-PPLIDCLQKDQPRNRENAAAILLCLCKRDTEK- 583
Query: 384 KTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLNPHRARL 429
++GA L+ L + G ++ K + LL+LL +L
Sbjct: 584 ---LISIGRLGAVVPLMELSRDG-TERAKRKANSLLELLRKSSRKL 625
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 125/274 (45%), Gaps = 32/274 (11%)
Query: 16 AGKKQPGVESGG--EMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNI 73
+G +Q + GG + + P F CPISLDLM+DPV STG TYDR +I +WI E+G+
Sbjct: 278 SGNRQRLLSIGGGDDTSFSVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWI-EEGHS 336
Query: 74 TCPVTNRVLTSFEPIPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITT 133
TCP + + L +PN +R +I WC YG++ +P E +C+ +
Sbjct: 337 TCPNSGQTLADHRLVPNRALRSLISQWC---GVYGLQ-YDSPESNEGMAECVAASCS-SR 391
Query: 134 ACKSEDQAGCRDLV---------------AKIKKWTKESDRNKRCIVDNGAVSVLAEAFE 178
A ++A R LV +I+ K +N+ I D GA+ +L
Sbjct: 392 AAMEANKATARILVRMLEDGSENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLL 451
Query: 179 TFSKTCLDENVSVLEEILSTLTLLFPLAGEGLTYLGSASSMRCMVWFLKSG-DLSRRRNA 237
+ + V+ L L++ P G + G +R +V L++G + NA
Sbjct: 452 SNDWMAQENAVTA----LLNLSIFEPNKGRIMEQEG---CLRLIVGVLQNGWTTEAKENA 504
Query: 238 VLVLREIVSSDHRKVNVLLDIEGAIEPLFKLIKE 271
L + S H ++++ GA+E L ++ +
Sbjct: 505 AATLFSL-SVVHNFKKLIMNEPGAVEELASMLTK 537
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 10/153 (6%)
Query: 27 GEMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFE 86
G+ +T P F CPISLDLM DPV +STG TYDR +I +WI E+G+ TCP T ++L
Sbjct: 299 GDTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWI-EEGHCTCPKTGQMLMDSR 357
Query: 87 PIPNHTIRRMIQDWCVENR-SYGIERIPTPR------IPV-SSVEVFEINCNITTACKSE 138
+PN ++ +I WC + SY E +P +P ++VE + +I ++
Sbjct: 358 IVPNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLAD 417
Query: 139 DQAGCRDLVAK-IKKWTKESDRNKRCIVDNGAV 170
+ + A+ I+ K N+ I + GA+
Sbjct: 418 GSQAAQTVAAREIRLLAKTGKENRAYIAEAGAI 450
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 183/394 (46%), Gaps = 27/394 (6%)
Query: 31 LTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPN 90
L P+ F CPI+L++M DPV ++TG TY++E+I+KW + G+ TCP T + L PN
Sbjct: 288 LILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWF-DAGHKTCPKTRQELDHLSLAPN 346
Query: 91 HTIRRMIQDWCVENRSYGIERIPTPRI-PVSSVEVFEINCNITTACKSEDQAGCRDLVAK 149
++ +I WC +N +IP + P S E + + A S R V +
Sbjct: 347 FALKNLIMQWCEKNNF----KIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQ 402
Query: 150 IKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLAGEG 209
++ +E+ N+ I + GA+ +L + ++ + + EN + + L L +
Sbjct: 403 MRLLARENPENRVLIANAGAIPLLVQLL-SYPDSGIQENA-----VTTLLNLSIDEVNKK 456
Query: 210 LTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLI 269
L + + ++ ++ L++G+ R N+ L + D KV + L I PL L+
Sbjct: 457 L--ISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLS--NGIPPLVDLL 512
Query: 270 KEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRSLCEKALSV 329
+ A + ++ SA+ + +D G+V LL +L D + ++ALS+
Sbjct: 513 QHGTLRGKKDALTALFNLSLNSANKG-----RAIDAGIVQPLLNLLKDKNLGMIDEALSI 567
Query: 330 LDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFAVSILWKLCKNEEREEKTAFAE 389
L L S GR S I +V+ I + + E A S+L +L N +
Sbjct: 568 LLLLASHPEGRQAIGQLSFI-ETLVEFIRQGTPKNKECATSVLLELGSN----NSSFILA 622
Query: 390 ALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLN 423
ALQ G ++ L+ + G ++ + + L++L++
Sbjct: 623 ALQFGVYEYLVEITTSGT-NRAQRKANALIQLIS 655
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 94/186 (50%), Gaps = 15/186 (8%)
Query: 39 CPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTIRRMIQ 98
CPISL++M DPV + TG TYDR +I KW GNITCP+T ++LTS E + N ++R++I+
Sbjct: 294 CPISLEIMTDPVVIETGHTYDRSSITKWFGS-GNITCPITGKILTSTELVDNVSVRQVIR 352
Query: 99 DWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACK-------SEDQAGCRDLVAK-- 149
C N GI R S +V + A K SE G +++ +
Sbjct: 353 KHCKTN---GIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEEMIYRAV 409
Query: 150 --IKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLAG 207
I+ TK S N+ C+V GAV+ L + + + ++ + + +T +AG
Sbjct: 410 REIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLSKHVTGKSKIAG 469
Query: 208 EGLTYL 213
EGL L
Sbjct: 470 EGLKIL 475
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 31 LTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPN 90
++ P +FRCP+S +LM DPV +++G T+DR +I+KW+ ++G CP T +VLT E IPN
Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWL-DNGLAVCPRTRQVLTHQELIPN 294
Query: 91 HTIRRMIQDWCVENR 105
+T++ MI W NR
Sbjct: 295 YTVKAMIASWLEANR 309
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 10/140 (7%)
Query: 293 SATEKPIQKFVDMGLVSLLLEMLVDAQRSLCEKALSVLDGLCSSDYGRGDAYNNSLIFPV 352
S T + V V L+E+L D + +KA+++L L + GR I P+
Sbjct: 625 SITHDNKARIVQAKAVKYLVELL-DPDLEMVDKAVALLANLSAVGEGRQAIVREGGI-PL 682
Query: 353 IVKKILRVSDLATEFAVSILWKLCKNEEREEKTAFAE-ALQVGAFQKLLLLLQVGCADKT 411
+V+ + S E A S+L +LC N + F LQ GA L+ L Q G +
Sbjct: 683 LVETVDLGSQRGKENAASVLLQLCLNSPK-----FCTLVLQEGAIPPLVALSQSG-TQRA 736
Query: 412 KEHVSELLKLLNPHR-ARLE 430
KE +LL R AR++
Sbjct: 737 KEKAQQLLSHFRNQRDARMK 756
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P FRCPI+L+LM+DPV ++TG TYDRE+I+ WI + G+ TCP T +VL +PN +
Sbjct: 275 PADFRCPITLELMRDPVVVATGQTYDRESIDLWI-QSGHNTCPKTGQVLKHTSLVPNRAL 333
Query: 94 RRMIQDWCVENR 105
+ +I WC + +
Sbjct: 334 KNLIVLWCRDQK 345
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 14 RRAGKKQPGVESGGEM--ELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDG 71
R A ++ S EM ++ P FRCP+S +LM+DPV L++G TYD+ I+KW+ G
Sbjct: 53 REATMRKMAKSSSLEMLETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWL-SSG 111
Query: 72 NITCPVTNRVLTSFEPIPNHTIRRMIQDWCVEN 104
N TCP T +VL PN IR MI WC +N
Sbjct: 112 NRTCPKTQQVLPHTALTPNLLIREMISKWCKKN 144
>sp|O81902|PUB8_ARATH U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8
PE=2 SV=1
Length = 374
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 154/352 (43%), Gaps = 30/352 (8%)
Query: 29 MELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEP- 87
M PN FRCPISL++M DPV L +G T+DR +I++WI + GN TCP+T L+
Sbjct: 1 MAFDLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWI-DSGNRTCPITKLPLSETPYL 59
Query: 88 IPNHTIRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAGCRDLV 147
IPNH +R +I ++ ++ PR T +S A + +
Sbjct: 60 IPNHALRSLILNFA----HVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESL 115
Query: 148 AKIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLAG 207
++ + TK +R + ++GAV + C+D VL+E +L L L
Sbjct: 116 TRLVRLTKRDSSIRRKVTESGAVRAALD--------CVDSCNQVLQEKSLSLLLNLSLED 167
Query: 208 EGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLRE--IVSSDHRKVNVLLDIEGAIEPL 265
+ L + +R +V L+ G + A +L +V + + D A+ L
Sbjct: 168 DNKVGLVADGVIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSL 227
Query: 266 FKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRSLCEK 325
++ + K S +Y + S K + VD G V +L+E A S E+
Sbjct: 228 LRVGND----RERKESATALY-ALCSFPDNRK---RVVDCGSVPILVE----AADSGLER 275
Query: 326 ALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDL-ATEFAVSILWKLC 376
A+ VL L GR + S V+V +LR +L ++++ IL LC
Sbjct: 276 AVEVLGLLVKCRGGREEMSKVSGFVEVLV-NVLRNGNLKGIQYSLFILNCLC 326
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 182/478 (38%), Gaps = 103/478 (21%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P+ FRC +SL+LM DPV +++G T++R I+KWI + G + CP T + L+ PN +
Sbjct: 241 PSDFRCSLSLELMTDPVIVASGQTFERVFIQKWI-DMGLMVCPKTRQALSHTTLTPNFIV 299
Query: 94 RRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSE--------------- 138
R + WC N Y P P + S E F + A SE
Sbjct: 300 RAFLASWCETNNVYP----PDPLELIHSSEPFPLLVESVRASSSENGHSESLDAEELRQV 355
Query: 139 ----------------------DQAGCRDLVAKIKKWTKESDRNKR-------CIVDNGA 169
+ A R L W +R+ R + + G+
Sbjct: 356 FSRSASAPGIVSEVVCKTKRNNNAAADRSLTRSNTPWKFPEERHWRHPGIIPATVRETGS 415
Query: 170 VSVLAEAFETFSKTCLDE----NVSVLEEILSTLTLLFPLAGEGLTYLGSASSMRCMVWF 225
S + ET K +D+ ++ E + + +L + + + ++ +V
Sbjct: 416 SS----SIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSL 471
Query: 226 LKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLIKEPIC------PTATK 279
L S D + +AV L + +D+ K L+ GAI PL ++K AT
Sbjct: 472 LYSTDERIQADAVTCLLNLSINDNNK--SLIAESGAIVPLIHVLKTGYLEEAKANSAATL 529
Query: 280 ASLVVV--YRT-ITSASATEKPIQ----------------------------KFVDMGLV 308
SL V+ Y+T I A A E + K ++ G V
Sbjct: 530 FSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAV 589
Query: 309 SLLLEMLVDAQRSLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSDLATEFA 368
L+E L+D + EKA+ VL L + G+ A PV+V+ + S E A
Sbjct: 590 RYLVE-LMDPAFGMVEKAVVVLANLATVREGK-IAIGEEGGIPVLVEVVELGSARGKENA 647
Query: 369 VSILWKLCKNEEREEKTAFAEALQVGAFQKLLLLLQVGCADKTKEHVSELLKLLNPHR 426
+ L +LC + + E G L+ L + G A + KE LLK HR
Sbjct: 648 TAALLQLCTHSPKFCNNVIRE----GVIPPLVALTKSGTA-RGKEKAQNLLKYFKAHR 700
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 131/288 (45%), Gaps = 19/288 (6%)
Query: 35 NHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTIR 94
+ RCPISL++M DPV L +G TYDR +I KW GNITCP T + L S + N +++
Sbjct: 280 DDLRCPISLEIMSDPVVLESGHTYDRSSITKWF-ASGNITCPKTGKTLVSTVLVDNFSVK 338
Query: 95 RMIQDWCVEN----RSYGIERIPTPRIPVSSVEVFEINCNITTA--CKSEDQAGCRDLVA 148
++IQ + +N G +++ +++ E ++ K +++ + LV
Sbjct: 339 QVIQSYSKQNGVVMGQKGKKKVDVAE-SLAAEEAGKLTAEFLAGELIKGDEEEMVKALV- 396
Query: 149 KIKKWTKESDRNKRCIVDNGAVSVLAEAFETFSKTCLDENVSVLEEILS-TLTLLFPLAG 207
+I+ TK S + C+V+ G V E+ K ++ + E ++ + L +AG
Sbjct: 397 EIRILTKTSTFYRSCLVEAGVV-------ESLMKILRSDDPRIQENAMAGIMNLSKDIAG 449
Query: 208 EGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFK 267
+ +R +V L G R +SS ++ +I AI L +
Sbjct: 450 KTRIVGEDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVR 509
Query: 268 LIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEML 315
++K + K + ++ R++ + + G+V +LL+++
Sbjct: 510 IVKSCDYGDSAKRNALIAIRSLLMNQPDNH--WRILAAGIVPVLLDLV 555
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P RCPISL LM DPV +++G TY+R IEKW DG+ TCP T++ L+ PN+ +
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWF-SDGHNTCPKTHQQLSHLCLTPNYCV 338
Query: 94 RRMIQDWCVEN 104
+ +I WC +N
Sbjct: 339 KALISSWCEQN 349
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 26 GGEMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSF 85
G+M + P RCPISL LM DPV +++G TY+R IEKW DG+ +CP T + L
Sbjct: 269 SGQMPIP-PEELRCPISLQLMYDPVIIASGQTYERVCIEKWF-SDGHNSCPKTQQQLPHL 326
Query: 86 EPIPNHTIRRMIQDWCVEN 104
PN+ ++ +I WC +N
Sbjct: 327 SLTPNYCVKGLIASWCEQN 345
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 25 SGGEMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTS 84
+ G+M + P RCPISL LM DPV +++G TY+R IEKW DG+ TCP T + L
Sbjct: 265 NSGQMPVP-PEELRCPISLQLMCDPVIIASGQTYERVCIEKWF-SDGHNTCPKTQQQLPH 322
Query: 85 FEPIPNHTIRRMIQDWCVEN 104
PN+ ++ +I WC +N
Sbjct: 323 ISLTPNNCVKGLIASWCEQN 342
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 119/263 (45%), Gaps = 27/263 (10%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTS-FEPIPNHT 92
P F CPI+ + DPVTL TG TY+R+ I++W+ GN TCP+T + L++ P N+
Sbjct: 514 PKDFVCPITGQIFSDPVTLETGQTYERKAIQEWLGT-GNTTCPITRQALSANILPKTNYV 572
Query: 93 IRRMIQDWCVENRSYGIE--RIPTPRIPVSSVEVFEIN--CNITTACKSEDQAGCRDLVA 148
++R+I W +N E TPR S +I +I S Q D +
Sbjct: 573 LKRLIVSWKEQNPELAQEFSNSNTPRGSSCSPSAKDITMVSSIQRTTDSPSQKYKDDYI- 631
Query: 149 KIKKWTKESDRNKRCIVDNGAVSVLAE-AFET--------FSKTCLDENVSVLEEILSTL 199
+ ++R R V SVL++ A ET + C EN+ E+ + +
Sbjct: 632 -----RQRNNRFTRVSVGASPTSVLSQAAVETIINSLTPYITSLCTSENLQDCEQAVLEI 686
Query: 200 TLLFPLAG---EGLTYLGSASSMRCMVWFLKSGDLSRR--RNAVLVLREIVSSDHRKVNV 254
L+ + + +YL + + +V L S L+R R ++ +L E++ SD R
Sbjct: 687 ARLWKDSKTDPQIHSYLSKPTVVSGLVEIL-SASLNREVLRRSIYILSELIFSDERVGET 745
Query: 255 LLDIEGAIEPLFKLIKEPICPTA 277
L ++ + L L+K + A
Sbjct: 746 LNSVDSDFDCLAMLLKNGLAEAA 768
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 132/290 (45%), Gaps = 29/290 (10%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLT-SFEPIPNHT 92
P F CPI+ + DPVTL TG TY+R+ I++W+ GN TCP+T + L+ S P N+
Sbjct: 512 PKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRT-GNTTCPITRQPLSASILPKTNYV 570
Query: 93 IRRMIQDWCVENRSYGIE--RIPTPRIPVSSVEVFEINCNITTACKSEDQAGCRDLVAKI 150
++R+I W +N E + TPR S +I ++T ++ D ++
Sbjct: 571 LKRLITSWKEQNPELAQEFSNVNTPRGSSCSPSAKDIPM-LSTRQRTTDSPNHKN----- 624
Query: 151 KKWTKE-SDRNKRCIVDNGAVSVLAE-AFET--------FSKTCLDENVSVLEEILSTLT 200
K + ++ S+R + SVL++ A ET S C EN+ EE + +
Sbjct: 625 KDYARQRSNRFMPAAITTSPTSVLSQAAVETIVNSLKPYISSLCTSENLPECEEAVLKIA 684
Query: 201 LLFPLAGEG---LTYLGSASSMRCMVWFLKSGDLSRR--RNAVLVLREIVSSDHRKVNVL 255
L + +YL + + +V L S +R R ++ +L E++ +D L
Sbjct: 685 RLLKDSKTNPQIHSYLSKPTIINGLVEIL-SASRNREVLRTSIYILSELIFTDDSVAETL 743
Query: 256 LDIEGAIEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDM 305
++ + L L+K + A A L+ R + + + + I VD+
Sbjct: 744 NSVDSDFDCLATLLKNGL---AEAALLIYQLRPVFAQLSAHELIPSLVDV 790
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
GN=LIN PE=1 SV=1
Length = 1485
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 139/311 (44%), Gaps = 30/311 (9%)
Query: 13 GRRAGKKQPGVESGGEMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGN 72
G ++ P +E M P F CPI+ + DPVTL TG TY+R+ I++W+ GN
Sbjct: 492 GYQSSSSLPKLEKLS-MGSKPPKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRT-GN 549
Query: 73 ITCPVTNRVLT-SFEPIPNHTIRRMIQDWCVENRSYGIE--RIPTPRIPVSSVEVFEINC 129
TCP+T + L+ S P N+ ++R+I W +N E + TPR S +I
Sbjct: 550 TTCPITRQPLSASILPKTNYVLKRLITSWKEQNPELAQEFSNVNTPRGSSCSPSAKDIPM 609
Query: 130 NITTACKSEDQAGCRDLVAKIKKWTKE-SDRNKRCIVDNGAVSVLAE-AFET-------- 179
++T ++ D ++ K + ++ S+R + SVL++ A ET
Sbjct: 610 -LSTRQRTTDSPNHKN-----KDYARQRSNRFMPAAITTSPTSVLSQAAVETIVNSLKPY 663
Query: 180 FSKTCLDENVSVLEEILSTLTLLFPLAGEG---LTYLGSASSMRCMVWFLKSGDLSRR-- 234
S C EN+ EE + + L + +YL + + +V L S +R
Sbjct: 664 ISSLCTSENLPECEEAVLKIARLLKDSKTNPQIHSYLSKPTIINGLVEIL-SASRNREVL 722
Query: 235 RNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLIKEPICPTATKASLVVVYRTITSASA 294
R ++ +L E++ +D L ++ + L L+K + A A L+ R + + +
Sbjct: 723 RTSIYILSELIFTDDSVAETLNSVDSDFDCLATLLKNGL---AEAALLIYQLRPVFAQLS 779
Query: 295 TEKPIQKFVDM 305
+ I VD+
Sbjct: 780 AHELIPSLVDV 790
>sp|Q9LQ92|PUB54_ARATH U-box domain-containing protein 54 OS=Arabidopsis thaliana GN=PUB54
PE=2 SV=1
Length = 308
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 37 FRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTIRRM 96
F+CPIS+++M+DP + G TY+ E KW+ G T P TN+ L + +PNHT+R +
Sbjct: 237 FKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGR-TSPKTNKPLENHNLVPNHTLRII 295
Query: 97 IQDWCVENRSY 107
I+DW +N +Y
Sbjct: 296 IKDWLEKNPNY 306
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 32 TTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNH 91
T P F+C +S +M DPV +S+G T++R I+KW E GN +CP++ R L F PN
Sbjct: 218 TLPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDE-GNDSCPISKRKLDDFTLKPNV 276
Query: 92 TIRRMIQDWCVEN 104
++ I +WC +N
Sbjct: 277 ELKSQISEWCAKN 289
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 37 FRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTIRRM 96
F CP+SL++M DPV +S+G TY++ I++WI + G CP T + LT IPN+T++ +
Sbjct: 234 FFCPLSLEVMTDPVIVSSGQTYEKAFIKRWI-DLGLKVCPKTRQTLTHTTLIPNYTVKAL 292
Query: 97 IQDWCVEN 104
I +WC N
Sbjct: 293 IANWCETN 300
>sp|P0C6E7|PUB55_ARATH Putative U-box domain-containing protein 55 OS=Arabidopsis thaliana
GN=PUB55 PE=3 SV=1
Length = 568
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P++F CPIS ++M++P + G TY+ E++ +W+ ++G+ T P+TN L +PNH +
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWL-DNGHETSPMTNLKLAHNNLVPNHAL 556
Query: 94 RRMIQDWCVEN 104
R IQ+W N
Sbjct: 557 RSAIQEWLQRN 567
>sp|Q683D5|PUB37_ARATH U-box domain-containing protein 37 OS=Arabidopsis thaliana GN=PUB37
PE=2 SV=1
Length = 400
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 33 TPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHT 92
P +F CPISL++MKDP + G TY+ E I W+ + G+ T P+TN L + +PN
Sbjct: 325 APQYFICPISLEVMKDPQLAADGFTYEAEAISTWL-QGGHETSPMTNTKLHHTKLVPNLA 383
Query: 93 IRRMIQDWCVENRSY 107
+R IQ+W + S+
Sbjct: 384 LRSAIQEWLHASSSF 398
>sp|Q9LU47|PUB53_ARATH Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana
GN=PUB53 PE=3 SV=1
Length = 819
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P+HF CP+ D+MK+P + G TYDR IE+W+ + + T PVTN L + +PNHT+
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWM--ENHRTSPVTNSPLQNVNLLPNHTL 807
Query: 94 RRMIQDWCVENR 105
I +W N+
Sbjct: 808 YAAIVEWRNRNQ 819
>sp|Q9D0I6|WSDU1_MOUSE WD repeat, SAM and U-box domain-containing protein 1 OS=Mus
musculus GN=Wdsub1 PE=2 SV=1
Length = 474
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P+ F CPI+ +LMKDPV S G +Y+RE +E WIH+ T P+TN L S PN T+
Sbjct: 403 PDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKR-TSPMTNLALPSLVLTPNRTL 461
Query: 94 RRMIQDW 100
+ I W
Sbjct: 462 KMAINRW 468
>sp|Q5FVN8|WSDU1_RAT WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus
norvegicus GN=Wdsub1 PE=2 SV=1
Length = 476
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P+ F CPI+ +LMKDPV S G +Y+RE +E WIH+ T P+TN L S PN T+
Sbjct: 405 PDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKR-TSPMTNLALPSLVLTPNRTL 463
Query: 94 RRMIQDW 100
+ I W
Sbjct: 464 KMAINRW 470
>sp|Q3E9F5|PUB48_ARATH U-box domain-containing protein 48 OS=Arabidopsis thaliana GN=PUB48
PE=2 SV=1
Length = 456
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 162/373 (43%), Gaps = 40/373 (10%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P F+C +S +M DPV + +G TY++ I +W++ D +TCP +VL PNH I
Sbjct: 75 PKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNHD--LTCPTAKQVLYRVCLTPNHLI 132
Query: 94 RRMIQDWCVENRSYGIERIPTPR---------IPVSSVEVFEINCNITTACKSEDQAGCR 144
+I WC+ N+ +R P P+ + +E + ++ ++ +
Sbjct: 133 NELITRWCLANK---YDR-PAPKPSDIDYVTELFTDGIESLLQRISSPSSSVADQTEAAK 188
Query: 145 DLVAKIKKWTKESDRNKRCIVDN-----GAVSVLAEAFETFSKTCLDENVSVLEEILSTL 199
+L + +K+ D + + D+ +SVL + +D N + E I++ L
Sbjct: 189 ELALQTEKFVNVRDFFIKELPDSITRLLTPLSVLGDE--------VDSNPELQENIVTAL 240
Query: 200 TLLFPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIE 259
+ + + + +K G + RRNA L L + D K +++
Sbjct: 241 FNMSTFEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSDIDSNK--IIIGNS 298
Query: 260 GAIEPLFKLIKEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQ 319
A++ L LI E +AT +L V I + +K + +GL ++ + A+
Sbjct: 299 VALKALIDLIGELDDLSATHDALCAV---IDLCCDERENWKKAISLGLAPAAIKN-IKAR 354
Query: 320 RSLCEKALSVLDGLCSSDYGRGDAYNNSLIFPVIVKKILRVSD--LATEFAVSILWKL-C 376
R+L E +L+ L + + + N +I+ ++ ILR + + E AV I+ +
Sbjct: 355 RNLFE-SLAALALISPHERVIQEVANLGVIYDLL--SILRKTSCMVTCENAVVIVGNMYA 411
Query: 377 KNEEREEKTAFAE 389
K+ ER K AE
Sbjct: 412 KSRERSIKKILAE 424
>sp|Q94A51|PUB32_ARATH U-box domain-containing protein 32 OS=Arabidopsis thaliana GN=PUB32
PE=2 SV=1
Length = 805
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P+H+ CPI ++MKDP+ + G TY+ E I +W+ +G+ T P+TN + IPNH +
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWL-ANGHDTSPMTNLKMEDCNLIPNHAL 794
Query: 94 RRMIQDW 100
IQDW
Sbjct: 795 HLAIQDW 801
>sp|Q3E9F7|PUB46_ARATH Putative U-box domain-containing protein 46 OS=Arabidopsis thaliana
GN=PUB46 PE=3 SV=1
Length = 458
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 162/379 (42%), Gaps = 37/379 (9%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWI-HEDGNITCPVTNRVLTSFEPIPNHT 92
P F C +S +M +PV +++G TY++ I +W+ HE TCP T +VL+ IPNH
Sbjct: 73 PKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKHER---TCPKTKQVLSHRLWIPNHL 129
Query: 93 IRRMIQDWCVENRSYGIERIPTPRIPVSSVEVFEINCNITTACKSEDQAGCRDLVAKIKK 152
I +I WC+ N+ Y ++ P+ + V+ + +I + S A + +++
Sbjct: 130 ISDLITQWCLVNK-YDHQK-PSDEL-VAELFTSDIEALLQRVSSSSSVADQIEAAKELRH 186
Query: 153 WTKESDRNKRCIVDNG---AVSVLAEAFETFSKTCLDENVSVLEEILSTLTLLFPLAGEG 209
TK+ N R G +++ L T + +D ++ + E I++ L L L
Sbjct: 187 QTKKFP-NVRVFFVAGIHDSITRLLSPLSTLDE-AVDSSLELQENIVTALFNLSILESNK 244
Query: 210 LTYLGSASSMRCMVWFLKSGDLSRRRNAVLVLREIVSSDHRKVNVLLDIEGAIEPLFKLI 269
+ + + LK G RRNA L + + D K +++ A++ L LI
Sbjct: 245 TVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNK--IIIGNSEAVKALIDLI 302
Query: 270 KEPICPTATKASLVVVYRTITSASATEKPIQKFVDMGLVSLLLEMLVDAQRSLCEKALSV 329
+E +A+ V I + K V GL+ + + KA S
Sbjct: 303 EEGDLLATKEATSTVFNLCIVLENKG-----KVVSAGLIHAATKKI---------KAGSN 348
Query: 330 LDGLCS-----SDYGRGDAYNNSLIFPVIVKKILR--VSDLATEFAVSILWKLC-KNEER 381
+D L S S + R + L F + ILR S L E AV I++ + +N +R
Sbjct: 349 VDELLSLLALISTHNRAVEEMDKLGFIYDLFSILRKPSSLLTGENAVVIVFNMYDRNRDR 408
Query: 382 EE-KTAFAEALQVGAFQKL 399
K E Q G F KL
Sbjct: 409 SRLKVVGEEENQHGTFTKL 427
>sp|Q8S8S7|PUB34_ARATH U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34
PE=3 SV=1
Length = 801
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 31 LTTPNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPN 90
L P+H+ CPI ++M++P + G TY+R+ I W+ E NI+ PVT + L F+ PN
Sbjct: 723 LRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWL-EKHNIS-PVTRQKLDHFKLTPN 780
Query: 91 HTIRRMIQDW 100
HT+R I+DW
Sbjct: 781 HTLRSAIRDW 790
>sp|Q9SFX2|PUB43_ARATH U-box domain-containing protein 43 OS=Arabidopsis thaliana GN=PUB43
PE=2 SV=1
Length = 811
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 142/323 (43%), Gaps = 51/323 (15%)
Query: 4 SWKRLRGGRGRRAGKKQPGVESGGEMELTTPNHFRCPISLDLMKDPVTLSTGITYDRENI 63
SW G + + + +PG+++ E F CP++ +M +PVTL G T++RE I
Sbjct: 6 SWD---GSQSDNSSQFEPGIDNIYEA-------FICPLTKQVMHNPVTLENGQTFEREAI 55
Query: 64 EKWIH---EDGN-ITCPVTNRVLTSFEPIPNHTIRRMIQDWCVENRSYGIERIPTPRIPV 119
EKW E+G ++CP+T++ L+ + P+ +R I++W N + ++ I
Sbjct: 56 EKWFQECRENGQPLSCPITSKELSITDLSPSIALRNTIEEWRARNDALKLD------IAR 109
Query: 120 SSVEVFEINCNITTACKSEDQAGCRDLVAKIKKWTKESDRNKRCIVDNGAVSVLAEAFET 179
S+ + NI A K+ R++ I+K R + C + V ++ + ++
Sbjct: 110 QSLYLGNAETNILLALKN-----VREICRNIRKI-----RQRVC--NPQLVRLITDMLKS 157
Query: 180 FSKTCLDENVSVLEEILSTLTLLFPLAGEGLTYLGSASSMRCMVWFLKSGDLSRRRNAVL 239
S V + L TL ++ E + ++R +V FL R AV
Sbjct: 158 SSH-------EVRCKALQTLQVVVEGDEESKAIVAEGDTVRTIVKFLSQEPSKGREAAVS 210
Query: 240 VLREIVSSDH--RKVNVLLDIEGAIEPLFKLI--KEPICPTATKASLVVVYRTITSASAT 295
VL E+ S+ K+ I GAI L L K T KA +T+T+ +
Sbjct: 211 VLFELSKSEALCEKIG---SIHGAIILLVGLTSSKSENVSTVEKAD-----KTLTNLERS 262
Query: 296 EKPIQKFVDMGLVSLLLEMLVDA 318
E+ +++ G + LL L++
Sbjct: 263 EENVRQMAINGRLQPLLAKLLEG 285
>sp|Q8GZ84|PUB36_ARATH U-box domain-containing protein 36 OS=Arabidopsis thaliana GN=PUB36
PE=2 SV=2
Length = 435
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 34 PNHFRCPISLDLMKDPVTLSTGITYDRENIEKWIHEDGNITCPVTNRVLTSFEPIPNHTI 93
P +F CPI+ D+M+DP + G TY+ E I +W E G+ T P+ N+ L +PN +
Sbjct: 354 PQYFICPITHDIMEDPHVAADGFTYEGEAISRWF-ERGHETSPMINKRLPHTSLVPNLAL 412
Query: 94 RRMIQDW 100
R IQ+W
Sbjct: 413 RSAIQEW 419
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,515,870
Number of Sequences: 539616
Number of extensions: 6205241
Number of successful extensions: 15264
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 15023
Number of HSP's gapped (non-prelim): 152
length of query: 444
length of database: 191,569,459
effective HSP length: 121
effective length of query: 323
effective length of database: 126,275,923
effective search space: 40787123129
effective search space used: 40787123129
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)