Your job contains 1 sequence.
>038256
EKTALILEFIWNSTMADSAANSKRSFNPLVLHLQKLALELKCPLCLNLFSRPLLLPCDHI
FCNSCIPRSAQCESECPLCKSQCTYADLRPLAFLENIIAIYKGLDASPSSNLLQPVYSAF
GRHQEDNSSSGQSLSANTLVQVSFNNSACDGQKGKGFELTGMGENKRDGGQNPNSAQPSS
HTQAGGIRDCRPAQIDINQLDQLSPCSPPSFGDIKGSDNESNDQGGELSPESYLANRSVK
RGFDDRTRQEHRLSSSETAGSFRDSKRLKGFNYGPDSVGVKSSGHSQSTVFRSESLMASK
SDSELKSVAALASEKMPPISIDSCANNYICGFCQSSRISEVTGLMLHYANGKPVVGEEAD
RSHVIHVHSKCIEWAPQVYYAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRS
YHVPCALEISECRWDTENFLVLCPVHSSVKFPIEKSGHRSIRNRAAPLQLTPQEPSFWGS
SPNKAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAKGSCTRTLK
VLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLDNHGCEEGPKTGRLRALNKAPKLF
DGLSFYFSGNFMLGYKEDLQSLVITAGGTIWKSEGELLAQCRNDETAPSKVLVVYNLDFP
EGSLIGEEVSTIWNRLNEAEELASKIGCRVI
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038256
(691 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2024244 - symbol:BARD1 "AT1G04020" species:370... 1190 5.8e-150 2
TAIR|locus:2133109 - symbol:BRCA1 "breast cancer suscepti... 817 2.0e-81 1
RGD|621072 - symbol:Bard1 "BRCA1 associated RING domain 1... 234 6.7e-23 2
UNIPROTKB|G3V7X7 - symbol:Bard1 "BRCA1 associated RING do... 234 6.7e-23 2
UNIPROTKB|F1SSQ2 - symbol:BARD1 "Uncharacterized protein"... 228 1.9e-20 2
UNIPROTKB|F1MAV4 - symbol:LOC100848694 "Uncharacterized p... 219 2.5e-20 3
MGI|MGI:1328361 - symbol:Bard1 "BRCA1 associated RING dom... 223 4.5e-20 3
UNIPROTKB|Q5ZKJ1 - symbol:BARD1 "Uncharacterized protein"... 218 7.2e-20 3
UNIPROTKB|Q90X95 - symbol:bard1 "BRCA1-associated RING do... 213 4.0e-19 2
UNIPROTKB|F1P8X2 - symbol:BARD1 "Uncharacterized protein"... 225 7.4e-19 3
UNIPROTKB|Q99728 - symbol:BARD1 "BRCA1-associated RING do... 215 7.5e-19 3
UNIPROTKB|G3XAC3 - symbol:BRCA1 "Breast cancer 1, early o... 159 5.3e-16 2
UNIPROTKB|E7ETR2 - symbol:BRCA1 "Breast cancer 1, early o... 159 7.3e-16 2
UNIPROTKB|I3L7C9 - symbol:BRCA1 "Uncharacterized protein"... 157 7.5e-16 3
UNIPROTKB|G3V8S5 - symbol:Brca1 "RCG34321, isoform CRA_a"... 150 1.2e-15 4
UNIPROTKB|Q6J6I8 - symbol:BRCA1 "Breast cancer type 1 sus... 157 1.2e-15 4
RGD|2218 - symbol:Brca1 "breast cancer 1, early onset" sp... 150 2.4e-15 4
UNIPROTKB|F1MYX8 - symbol:BRCA1 "Breast cancer type 1 sus... 161 3.6e-15 3
UNIPROTKB|Q864U1 - symbol:BRCA1 "Breast cancer type 1 sus... 161 3.6e-15 3
UNIPROTKB|Q6J6J0 - symbol:BRCA1 "Breast cancer type 1 sus... 159 3.8e-15 4
UNIPROTKB|Q6J6I9 - symbol:BRCA1 "Breast cancer type 1 sus... 161 7.4e-15 4
UNIPROTKB|P38398 - symbol:BRCA1 "Breast cancer type 1 sus... 159 1.5e-14 4
UNIPROTKB|Q9GKK8 - symbol:BRCA1 "Breast cancer type 1 sus... 159 1.5e-14 4
UNIPROTKB|E9PFC7 - symbol:BRCA1 "Breast cancer type 1 sus... 159 1.6e-14 4
UNIPROTKB|Q95153 - symbol:BRCA1 "Breast cancer type 1 sus... 150 2.8e-14 4
UNIPROTKB|F1PAI7 - symbol:BRCA1 "Breast cancer type 1 sus... 150 2.9e-14 4
MGI|MGI:104537 - symbol:Brca1 "breast cancer 1" species:1... 142 1.4e-13 4
UNIPROTKB|E7EUM2 - symbol:BRCA1 "Breast cancer type 1 sus... 126 8.6e-12 2
UNIPROTKB|Q90X96 - symbol:brca1 "Breast and ovarian cance... 139 1.2e-11 3
UNIPROTKB|F1N8I5 - symbol:BRCA1 "Uncharacterized protein"... 127 1.4e-11 2
UNIPROTKB|A9JX13 - symbol:TCF20 "Transcription factor 20"... 175 3.4e-11 1
UNIPROTKB|E2RT08 - symbol:TCF20 "Uncharacterized protein"... 179 2.2e-10 2
MGI|MGI:108399 - symbol:Tcf20 "transcription factor 20" s... 176 4.8e-10 2
UNIPROTKB|E7EMP0 - symbol:BRCA1 "Breast cancer type 1 sus... 126 1.2e-09 4
UNIPROTKB|F8W0F5 - symbol:G2E3 "G2/M phase-specific E3 ub... 148 2.2e-09 1
UNIPROTKB|G3V3B6 - symbol:G2E3 "G2/M phase-specific E3 ub... 145 4.7e-09 1
FB|FBgn0003862 - symbol:trx "trithorax" species:7227 "Dro... 194 4.9e-09 4
UNIPROTKB|Q9UGU0 - symbol:TCF20 "Transcription factor 20"... 174 5.1e-09 2
UNIPROTKB|E1B8T3 - symbol:TCF20 "Uncharacterized protein"... 174 5.2e-09 2
UNIPROTKB|D4A0Y0 - symbol:D4A0Y0 "Uncharacterized protein... 140 1.6e-08 1
UNIPROTKB|K7EPC7 - symbol:BRCA1 "Breast cancer type 1 sus... 159 2.1e-08 1
UNIPROTKB|Q5JRC6 - symbol:PHF6 "PHD finger protein 6, iso... 157 2.7e-08 1
MGI|MGI:2444298 - symbol:G2e3 "G2/M-phase specific E3 ubi... 162 3.5e-08 1
UNIPROTKB|E9PC97 - symbol:PHF6 "PHD finger protein 6" spe... 157 3.7e-08 1
UNIPROTKB|A2AAZ5 - symbol:TRIM39 "E3 ubiquitin-protein li... 135 5.6e-08 1
UNIPROTKB|F8VY49 - symbol:G2E3 "G2/M phase-specific E3 ub... 135 5.6e-08 1
UNIPROTKB|B4DES0 - symbol:BRCA1 "Breast cancer type 1 sus... 159 5.6e-08 2
RGD|1310263 - symbol:G2e3 "G2/M-phase specific E3 ubiquit... 160 5.8e-08 1
UNIPROTKB|C9J060 - symbol:TRIM22 "E3 ubiquitin-protein li... 143 7.0e-08 1
UNIPROTKB|J9NTC9 - symbol:PHF6 "Uncharacterized protein" ... 154 8.0e-08 1
UNIPROTKB|E1BXI6 - symbol:Gga.5057 "Uncharacterized prote... 174 1.4e-07 3
UNIPROTKB|Q8IWS0 - symbol:PHF6 "PHD finger protein 6" spe... 151 1.7e-07 1
UNIPROTKB|Q08DR0 - symbol:PHF6 "PHD finger protein 6" spe... 151 1.7e-07 1
MGI|MGI:1918248 - symbol:Phf6 "PHD finger protein 6" spec... 150 2.2e-07 1
RGD|2323526 - symbol:Phf6 "PHD finger protein 6" species:... 150 2.2e-07 1
UNIPROTKB|E1C281 - symbol:PHF6 "Uncharacterized protein" ... 150 2.2e-07 1
UNIPROTKB|C9JIU5 - symbol:TRIM22 "E3 ubiquitin-protein li... 143 2.5e-07 1
UNIPROTKB|F1PRR9 - symbol:G2E3 "Uncharacterized protein" ... 154 2.7e-07 1
UNIPROTKB|F1N5U1 - symbol:G2E3 "Uncharacterized protein" ... 152 4.2e-07 1
ZFIN|ZDB-GENE-030131-5278 - symbol:phf6 "PHD finger prote... 147 4.7e-07 1
UNIPROTKB|C9JWH0 - symbol:PHF11 "PHD finger protein 11" s... 126 5.1e-07 1
UNIPROTKB|E9PFZ0 - symbol:BRCA1 "Breast cancer type 1 sus... 159 5.6e-07 4
TAIR|locus:2083681 - symbol:AT3G15120 species:3702 "Arabi... 153 5.7e-07 3
MGI|MGI:2685640 - symbol:Trim75 "tripartite motif-contain... 147 7.7e-07 1
MGI|MGI:1923931 - symbol:Trim12a "tripartite motif-contai... 145 7.7e-07 2
RGD|1310853 - symbol:Phf11 "PHD finger protein 11" specie... 144 8.4e-07 1
UNIPROTKB|Q5I0E2 - symbol:Phf11 "PHD finger protein 11" s... 144 8.4e-07 1
UNIPROTKB|C9JWC5 - symbol:TRIM22 "E3 ubiquitin-protein li... 143 8.6e-07 1
UNIPROTKB|F1SHF3 - symbol:G2E3 "Uncharacterized protein" ... 149 8.8e-07 1
UNIPROTKB|F5GX24 - symbol:G2E3 "G2/M phase-specific E3 ub... 148 1.0e-06 1
UNIPROTKB|Q7L622 - symbol:G2E3 "G2/M phase-specific E3 ub... 148 1.1e-06 1
UNIPROTKB|G3V483 - symbol:G2E3 "G2/M phase-specific E3 ub... 148 1.2e-06 1
UNIPROTKB|E7EP70 - symbol:BRCA1 "Breast cancer type 1 sus... 159 1.3e-06 3
UNIPROTKB|G3N137 - symbol:G3N137 "Uncharacterized protein... 121 1.8e-06 1
UNIPROTKB|F1SN25 - symbol:TRIM69 "Uncharacterized protein... 144 1.8e-06 1
DICTYBASE|DDB_G0293300 - symbol:DDB_G0293300 "Breast canc... 147 2.0e-06 2
UNIPROTKB|Q8IYM9 - symbol:TRIM22 "E3 ubiquitin-protein li... 143 2.3e-06 1
UNIPROTKB|J9P8B7 - symbol:RAI1 "Uncharacterized protein" ... 140 2.7e-06 2
UNIPROTKB|E2RE72 - symbol:RAI1 "Uncharacterized protein" ... 140 2.8e-06 2
DICTYBASE|DDB_G0274195 - symbol:DDB_G0274195 "Microcephal... 147 3.0e-06 2
UNIPROTKB|A2AAZ6 - symbol:TRIM39 "E3 ubiquitin-protein li... 135 4.3e-06 1
UNIPROTKB|A2AE51 - symbol:TRIM26 "Tripartite motif-contai... 117 4.7e-06 1
MGI|MGI:1925835 - symbol:Phf17 "PHD finger protein 17" sp... 143 4.9e-06 1
ZFIN|ZDB-GENE-081104-417 - symbol:phf11 "PHD finger prote... 140 5.6e-06 1
UNIPROTKB|F1NE42 - symbol:G2E3 "G2/M phase-specific E3 ub... 139 5.9e-06 1
RGD|1304579 - symbol:Trim5 "tripartite motif-containing 5... 139 6.7e-06 1
UNIPROTKB|J9NXD4 - symbol:BRCA1 "Breast cancer type 1 sus... 150 6.8e-06 3
UNIPROTKB|Q7Z5J4 - symbol:RAI1 "Retinoic acid-induced pro... 139 7.4e-06 2
UNIPROTKB|Q1ACD5 - symbol:TRIM5 "Tripartite motif-contain... 138 8.1e-06 1
UNIPROTKB|Q5C8U1 - symbol:TRIM5 "Tripartite motif-contain... 138 8.1e-06 1
UNIPROTKB|Q5D7I5 - symbol:TRIM5 "Tripartite motif-contain... 138 8.1e-06 1
UNIPROTKB|C9JWN8 - symbol:TRIM5 "Tripartite motif-contain... 114 9.9e-06 1
RGD|1359377 - symbol:Phf11b "PHD finger protein 11B" spec... 133 1.0e-05 1
UNIPROTKB|B0V1M0 - symbol:TRIM31 "E3 ubiquitin-protein li... 131 1.0e-05 1
ZFIN|ZDB-GENE-110411-97 - symbol:tcf20 "transcription fac... 154 1.0e-05 2
MGI|MGI:98178 - symbol:Trim30a "tripartite motif-containi... 137 1.1e-05 1
UNIPROTKB|F1NHK8 - symbol:G2E3 "G2/M phase-specific E3 ub... 139 1.1e-05 1
UNIPROTKB|F1RRB5 - symbol:PHF17 "Uncharacterized protein"... 140 1.1e-05 1
UNIPROTKB|Q2HJ93 - symbol:PHF11 "PHD finger protein 11" s... 134 1.1e-05 1
UNIPROTKB|Q5F4A1 - symbol:G2E3 "G2/M phase-specific E3 ub... 139 1.1e-05 1
WARNING: Descriptions of 228 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2024244 [details] [associations]
symbol:BARD1 "AT1G04020" species:3702 "Arabidopsis
thaliana" [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0005622 "intracellular" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IMP] [GO:0003677
"DNA binding" evidence=IDA] [GO:0009934 "regulation of meristem
structural organization" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA] [GO:0006260 "DNA
replication" evidence=RCA] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0009555 "pollen development" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016568 "chromatin modification"
evidence=RCA] [GO:0031047 "gene silencing by RNA" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA] [GO:0051726
"regulation of cell cycle" evidence=RCA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518
EMBL:CP002684 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0048366 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 GO:GO:0009934 KO:K10683 PANTHER:PTHR13763
IPI:IPI00538630 RefSeq:NP_171898.2 UniGene:At.49850
ProteinModelPortal:F4I443 SMR:F4I443 EnsemblPlants:AT1G04020.1
GeneID:839329 KEGG:ath:AT1G04020 OMA:IEWAPQV Uniprot:F4I443
Length = 714
Score = 1190 (424.0 bits), Expect = 5.8e-150, Sum P(2) = 5.8e-150
Identities = 226/381 (59%), Positives = 278/381 (72%)
Query: 313 SEKMPPISIDSCANNYICGFCQSSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSKCI 372
SEK+ + +N ICGFCQS+R+SE TG MLHY+ G+PV G++ RS+VIHVHS CI
Sbjct: 317 SEKISKALEQTSSNITICGFCQSARVSEATGEMLHYSRGRPVDGDDIFRSNVIHVHSACI 376
Query: 373 EWAPQVYYAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISEC 432
EWAPQVYY GDTVKNLKAELARG K+KC++C LKGAALGC+V+SCRRSYHVPCA EIS C
Sbjct: 377 EWAPQVYYEGDTVKNLKAELARGMKIKCTKCSLKGAALGCFVKSCRRSYHVPCAREISRC 436
Query: 433 RWDTENFLVLCPVHSSVKFPIEKSGHRSIRNRAAPL-QLTPQEPSFWGSSPNKAKEWVFC 491
RWD E+FL+LCP HSSVKFP EKSGHR +RA PL ++ P E +P KE V C
Sbjct: 437 RWDYEDFLLLCPAHSSVKFPNEKSGHRV--SRAEPLPKINPAELCSLEQTPAFTKELVLC 494
Query: 492 GSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAKGSCTRTLKVLMAILNGNWV 551
GSALS +K L+ +S++W P+VTHVIA+TD KG+CTRTLKVLM ILNG W+
Sbjct: 495 GSALSKSDKKLMESLAVRFNATISRYWNPSVTHVIASTDEKGACTRTLKVLMGILNGKWI 554
Query: 552 LKIDWIKACMEAMNPVGEEPYEINLDNHGCEEGPKTGRLRALNKAPKLFDGLSFYFSGNF 611
+ W+KA ++A PV EEP+EI +D GC++GPKT RLRA PKLF+GL FYF G+F
Sbjct: 555 INAAWMKASLKASQPVDEEPFEIQIDTQGCQDGPKTARLRAETNKPKLFEGLKFYFFGDF 614
Query: 612 MLGYKEDLQSLVITAGGTIWKSEGELLAQCRND-ETAPSKVLVVYNLDFPEGSLIGEEVS 670
GYKEDLQ+LV AGGTI +E EL A+ N+ S +VVYN+D P G +GEEV+
Sbjct: 615 YKGYKEDLQNLVKVAGGTILNTEDELGAESSNNVNDQRSSSIVVYNIDPPHGCALGEEVT 674
Query: 671 TIWNRLNEAEELASKIGCRVI 691
IW R N+AE LAS+ G R++
Sbjct: 675 IIWQRANDAEALASQTGSRLV 695
Score = 295 (108.9 bits), Expect = 5.8e-150, Sum P(2) = 5.8e-150
Identities = 71/163 (43%), Positives = 95/163 (58%)
Query: 27 NPLVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESECPLCKSQCTYA 86
NP VLHLQKL LELKCPLCL L +RP+LLPCDH+FC+SC+ +S+Q ES CP+CKS+
Sbjct: 10 NPWVLHLQKLELELKCPLCLKLLNRPVLLPCDHVFCDSCVHKSSQVESGCPVCKSKHPKK 69
Query: 87 DLRPLAFLENIIAIYKGLDASPSSNLLQ---PVYSAFGRHQEDNSSS---GQSLSAN-TL 139
R L F+E++I+IYK L+A+ S +L Q P + +NS+S G+S + T
Sbjct: 70 ARRDLRFMESVISIYKSLNAAVSVHLPQLQIPNDCNYKNDALNNSNSPKHGESEDSEMTD 129
Query: 140 VQVSFNNSACDGQKGKGFEL-TGMGENKRDGGQNPNSAQPSSH 181
VS + D G L T + R Q+ Q S H
Sbjct: 130 KDVSKRSGGTDSSSRDGSPLPTSEESDPRPKHQDWTEKQLSDH 172
>TAIR|locus:2133109 [details] [associations]
symbol:BRCA1 "breast cancer susceptibility1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA;IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010332 "response
to gamma radiation" evidence=IEP;RCA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0006310 "DNA
recombination" evidence=IMP] [GO:0006302 "double-strand break
repair" evidence=RCA] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 GO:GO:0010332
GO:GO:0006310 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
KO:K10683 HSSP:P28990 EMBL:AY081328 EMBL:AF515728 EMBL:BT010547
IPI:IPI00526043 RefSeq:NP_193839.4 UniGene:At.32665
ProteinModelPortal:Q8RXD4 SMR:Q8RXD4 MINT:MINT-3289893
STRING:Q8RXD4 PaxDb:Q8RXD4 PRIDE:Q8RXD4 EnsemblPlants:AT4G21070.1
GeneID:827854 KEGG:ath:AT4G21070 TAIR:At4g21070 eggNOG:NOG274496
HOGENOM:HOG000084100 InParanoid:Q8RXD4 OMA:EWAPNVY PhylomeDB:Q8RXD4
ProtClustDB:CLSN2681611 Genevestigator:Q8RXD4 PANTHER:PTHR13763
Uniprot:Q8RXD4
Length = 941
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 200/571 (35%), Positives = 292/571 (51%)
Query: 132 QSLSANTLVQVSFN-NSACDGQKGKGFELTGMGENKRDGGQNPNSAQPSSHTQAGGIRDC 190
+S + +T VQ N ++ DG++G + + + + PN + G +D
Sbjct: 375 RSKAQSTRVQSDLNVSNEADGKQGTKRKRSSIKSSPAHPIAGPNELSLGTEIVGKGDQDQ 434
Query: 191 RPAQIDINQLDQLSPCSPPSFGDIKGSDNESNDQGGELSPESYLANRSVKRGFDDRTRQE 250
D + ++ SP PS +K +SN S L+ ++ K+ + + + +
Sbjct: 435 AHGPSDTHP-EKRSPTEKPS---LKKRGRKSNAS----SSLKDLSGKTQKKTSEKKLKLD 486
Query: 251 HRLSSSETAGSFRDSKRLKGFNYGPDSVGVKSSGHSQSTVFRSESLM-ASKSDSELKSVA 309
+ SS+ + G N G D S + +STV + + M + S + +
Sbjct: 487 SHMISSKATQPHGNGILTAGLNQGGDKQD--SRNNRKSTVGKDDHTMQVIEKCSTINKSS 544
Query: 310 ALASEKMPPISIDSCANNYICGFCQSSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHS 369
+ S + + S + C FCQ S +E +G M HY G+PV + S VIHVH
Sbjct: 545 SGGSAHLRRCN-GSLTKKFTCAFCQCSEDTEASGEMTHYYRGEPVSADFNGGSKVIHVHK 603
Query: 370 KCIEWAPQVYYAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEI 429
C EWAP VY+ T+ NL EL R ++ CS CGLKGAALGCY +SC+ S+HV CA I
Sbjct: 604 NCAEWAPNVYFNDLTIVNLDVELTRSRRISCSCCGLKGAALGCYNKSCKNSFHVTCAKLI 663
Query: 430 SECRWDTENFLVLCPVHSSVKFPIEKSGHRSIRNRAAPLQLTPQEPSFWGSSPN------ 483
ECRWD F++LCP+ +S+K P E++ + + + P + +P N
Sbjct: 664 PECRWDNVKFVMLCPLDASIKLPCEEANSKDRKCKRTPKEPLHSQPKQVSGKANIRELHI 723
Query: 484 K-----AKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAKGSCTRT 538
K +K+ V S L+VEEK ++ F + GV +SK W VTHVIA+ + G+C RT
Sbjct: 724 KQFHGFSKKLVLSCSGLTVEEKTVIAEFAELSGVTISKNWDSTVTHVIASINENGACKRT 783
Query: 539 LKVLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLDNHGCEEGPKTGRLRALNKAPK 598
LK +MAIL G W+L IDWIKACM+ V EEPYEI +D HG EGP GR RAL K PK
Sbjct: 784 LKFMMAILEGKWILTIDWIKACMKNTKYVSEEPYEITMDVHGIREGPYLGRQRALKKKPK 843
Query: 599 LFDGLSFYFSGNFMLGYKEDLQSLVITAGGTIWKSEGELLAQCRNDETAPSKVLVVYNLD 658
LF GL FY G+F L YK LQ L++ AGGTI + +D+ S + VV++++
Sbjct: 844 LFTGLKFYIMGDFELAYKGYLQDLIVAAGGTILRRR-----PVSSDDNEASTI-VVFSVE 897
Query: 659 FPEGSLIGEEVSTIWNRLNEAEELASKIGCR 689
P + T+ R ++AE LA R
Sbjct: 898 -PS------KKKTLTQRRSDAEALAKSARAR 921
Score = 199 (75.1 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 56/241 (23%), Positives = 112/241 (46%)
Query: 32 HLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESECPLCKSQCTYADLRPL 91
HL+++ ELKCP+CL+L++ + L C+H+FCN+CI +S + ++ CP+CK ++R
Sbjct: 6 HLERMGRELKCPICLSLYNSAVSLSCNHVFCNACIVKSMKMDATCPVCKIPYHRREIRGA 65
Query: 92 AFLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSFNNSACDG 151
++++++IYK ++ + L F + S + + V+ + + +
Sbjct: 66 PHMDSLVSIYKNMEDASGIKL-------FVSQNNPSPSDKEKQVRDASVEKASDKNRQGS 118
Query: 152 QKGKGFELTGMGENKR-D-GGQNPNSAQPSSHTQAG-GIRDCRPAQIDINQLDQLSPCSP 208
+KG+ + G+ K D P +PSS T+ + A+ + +
Sbjct: 119 RKGRASKRNEYGKTKEIDVDAPGPIVMKPSSQTKKRVQLLQNLSAESLTKPTESVETAEK 178
Query: 209 PS-FGD---IKGSDNESNDQGGELSPESYLANRSVKRGFDDRTRQEHRLSSSET-AGSFR 263
P + + I+ ++ S ++ G LSP +L + RT + L ++ SF
Sbjct: 179 PKDYTENTVIRLDEHPSLNKEGNLSPFFWLRDEDDGENSSQRTESDQLLGTTPVNVPSFS 238
Query: 264 D 264
D
Sbjct: 239 D 239
>RGD|621072 [details] [associations]
symbol:Bard1 "BRCA1 associated RING domain 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003723 "RNA binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0005634
"nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS;IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0031436 "BRCA1-BARD1 complex"
evidence=ISO;ISS] [GO:0042325 "regulation of phosphorylation"
evidence=ISO;ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISO;ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO;ISS;IDA] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISO;ISS] [GO:0046826 "negative
regulation of protein export from nucleus" evidence=ISO;ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0070531 "BRCA1-A complex" evidence=ISO] [GO:0085020 "protein
K6-linked ubiquitination" evidence=ISO;ISS] InterPro:IPR001841
InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088
PROSITE:PS50089 SMART:SM00184 SMART:SM00248 UniPathway:UPA00143
InterPro:IPR001357 RGD:621072 Prosite:PS00518 GO:GO:0005737
GO:GO:0043066 GO:GO:0042803 GO:GO:0042325 GO:GO:0046872
eggNOG:COG0666 GO:GO:0008270 GO:GO:0006281 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007283 GO:GO:0003723 GO:GO:0043065 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 GO:GO:0070531 GO:GO:0031436
CTD:580 HOGENOM:HOG000237306 HOVERGEN:HBG050662 KO:K10683
OrthoDB:EOG4FFD1B GO:GO:0046826 GO:GO:0085020 EMBL:AF182946
IPI:IPI00214992 RefSeq:NP_072144.1 UniGene:Rn.48735
ProteinModelPortal:Q9QZH2 SMR:Q9QZH2 STRING:Q9QZH2 PRIDE:Q9QZH2
GeneID:64557 KEGG:rno:64557 UCSC:RGD:621072 InParanoid:Q9QZH2
NextBio:613468 ArrayExpress:Q9QZH2 Genevestigator:Q9QZH2
GermOnline:ENSRNOG00000014960 Uniprot:Q9QZH2
Length = 768
Score = 234 (87.4 bits), Expect = 6.7e-23, Sum P(2) = 6.7e-23
Identities = 58/147 (39%), Positives = 77/147 (52%)
Query: 484 KAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAKGSCTRTLKVLM 543
K+ V GS LS +++ LL + ++ + VTHVI + S TLK ++
Sbjct: 557 KSGPLVLIGSGLSSQQQKLLSKLETVLKAKKCAEFDNTVTHVIVPDEEAQS---TLKCML 613
Query: 544 AILNGNWVLKIDWIKACMEAMNPVGEEPYEINLDNHGCEEGPKTGRLRALNKAPKLFDGL 603
ILNG WVLK DW+KAC+++ EE YE+ G GP+ RL PKLFDG
Sbjct: 614 GILNGCWVLKFDWVKACLDSQEREQEEKYEVP----G---GPQRSRLNREQLLPKLFDGC 666
Query: 604 SFYFSGNFMLGYKEDLQSLVITAGGTI 630
F+ GNF KEDL L+ AGG I
Sbjct: 667 YFFLGGNFKHHPKEDLLKLIAAAGGRI 693
Score = 115 (45.5 bits), Expect = 6.7e-23, Sum P(2) = 6.7e-23
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQCE-SECPLCKSQCTYADLRP 90
L +L L+C C N+ P+ L C+HIFC+ CI + C S CP+C + DL+
Sbjct: 35 LARLEKLLRCSRCANILREPVCLGGCEHIFCSGCI---SDCVGSGCPVCHTPAWILDLKI 91
Query: 91 LAFLENIIAIYKGL 104
L+++I +Y L
Sbjct: 92 NRQLDSMIQLYSKL 105
Score = 48 (22.0 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 175 SAQPSSHTQAGGIRDCRPAQIDINQLDQLSPCSPPSFGDIKGSDNESNDQGGELSPESYL 234
S P HT A I D + + ++ + QL D KGSD++ + L ++
Sbjct: 75 SGCPVCHTPAW-ILDLKINR-QLDSMIQLYSKLQNLLHDNKGSDSKDDTSRASLFGDAER 132
Query: 235 ANRSVKRGFDDRTRQ 249
SVK F R+++
Sbjct: 133 KKNSVKMWFSPRSKK 147
>UNIPROTKB|G3V7X7 [details] [associations]
symbol:Bard1 "BRCA1 associated RING domain 1" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0031436 "BRCA1-BARD1 complex"
evidence=IEA] [GO:0042325 "regulation of phosphorylation"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0046826 "negative regulation
of protein export from nucleus" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0070531 "BRCA1-A
complex" evidence=IEA] [GO:0085020 "protein K6-linked
ubiquitination" evidence=IEA] InterPro:IPR001841 InterPro:IPR002110
Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50089
SMART:SM00184 SMART:SM00248 InterPro:IPR001357 RGD:621072
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GeneTree:ENSGT00550000074487 InterPro:IPR017907
OMA:KKNSIKM UniGene:Rn.48735 EMBL:CH474044
Ensembl:ENSRNOT00000020414 Uniprot:G3V7X7
Length = 768
Score = 234 (87.4 bits), Expect = 6.7e-23, Sum P(2) = 6.7e-23
Identities = 58/147 (39%), Positives = 77/147 (52%)
Query: 484 KAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAKGSCTRTLKVLM 543
K+ V GS LS +++ LL + ++ + VTHVI + S TLK ++
Sbjct: 557 KSGPLVLIGSGLSSQQQKLLSKLETVLKAKKCAEFDNTVTHVIVPDEEAQS---TLKCML 613
Query: 544 AILNGNWVLKIDWIKACMEAMNPVGEEPYEINLDNHGCEEGPKTGRLRALNKAPKLFDGL 603
ILNG WVLK DW+KAC+++ EE YE+ G GP+ RL PKLFDG
Sbjct: 614 GILNGCWVLKFDWVKACLDSQEREQEEKYEVP----G---GPQRSRLNREQLLPKLFDGC 666
Query: 604 SFYFSGNFMLGYKEDLQSLVITAGGTI 630
F+ GNF KEDL L+ AGG I
Sbjct: 667 YFFLGGNFKHHPKEDLLKLIAAAGGRI 693
Score = 115 (45.5 bits), Expect = 6.7e-23, Sum P(2) = 6.7e-23
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQCE-SECPLCKSQCTYADLRP 90
L +L L+C C N+ P+ L C+HIFC+ CI + C S CP+C + DL+
Sbjct: 35 LARLEKLLRCSRCANILREPVCLGGCEHIFCSGCI---SDCVGSGCPVCHTPAWILDLKI 91
Query: 91 LAFLENIIAIYKGL 104
L+++I +Y L
Sbjct: 92 NRQLDSMIQLYSKL 105
Score = 48 (22.0 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 175 SAQPSSHTQAGGIRDCRPAQIDINQLDQLSPCSPPSFGDIKGSDNESNDQGGELSPESYL 234
S P HT A I D + + ++ + QL D KGSD++ + L ++
Sbjct: 75 SGCPVCHTPAW-ILDLKINR-QLDSMIQLYSKLQNLLHDNKGSDSKDDTSRASLLGDAER 132
Query: 235 ANRSVKRGFDDRTRQ 249
SVK F R+++
Sbjct: 133 KKNSVKMWFSPRSKK 147
>UNIPROTKB|F1SSQ2 [details] [associations]
symbol:BARD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0085020 "protein K6-linked ubiquitination"
evidence=IEA] [GO:0070531 "BRCA1-A complex" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0046826 "negative regulation of protein export from nucleus"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042325 "regulation of
phosphorylation" evidence=IEA] [GO:0031436 "BRCA1-BARD1 complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50088 PROSITE:PS50089 SMART:SM00184 SMART:SM00248
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0005737
GO:GO:0043066 GO:GO:0042325 GO:GO:0046872 GO:GO:0008270
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003723 GO:GO:0043065 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GeneTree:ENSGT00550000074487 InterPro:IPR017907
GO:GO:0070531 GO:GO:0031436 OMA:KKNSIKM GO:GO:0046826 GO:GO:0085020
EMBL:CU856276 Ensembl:ENSSSCT00000017605 Uniprot:F1SSQ2
Length = 780
Score = 228 (85.3 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 56/142 (39%), Positives = 73/142 (51%)
Query: 489 VFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAKGSCTRTLKVLMAILNG 548
V GS LS E++ +L M+ + VTHV+ D S TLK ++ IL+G
Sbjct: 574 VLIGSGLSSEQQKMLSELAAMLKAKKCAEFDSAVTHVVVPGDTVQS---TLKCMLGILSG 630
Query: 549 NWVLKIDWIKACMEAMNPVGEEPYEINLDNHGCEEGPKTGRLRALNKAPKLFDGLSFYFS 608
W+LK +W+KAC++ EE YEI EGP+ RL PKLFDG FYF
Sbjct: 631 CWILKFEWVKACLQRKKCEQEEKYEI-------PEGPRRSRLNREQLLPKLFDGCYFYFG 683
Query: 609 GNFMLGYKEDLQSLVITAGGTI 630
G F K++L LV AGG I
Sbjct: 684 GTFKHHPKDNLIKLVTAAGGQI 705
Score = 98 (39.6 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQC-ESECPLCKSQCTYADLRP 90
L +L L+C C ++ P+ L C+HIFC++CI + C S CP+C + D++
Sbjct: 39 LARLEKLLRCSRCTDILREPVCLGGCEHIFCSNCI---SDCFGSGCPVCYTPAWIQDVKI 95
Query: 91 LAFLENIIAI 100
L+++I +
Sbjct: 96 NRQLDSMIQL 105
>UNIPROTKB|F1MAV4 [details] [associations]
symbol:LOC100848694 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0085020 "protein K6-linked ubiquitination"
evidence=IEA] [GO:0070531 "BRCA1-A complex" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0046826 "negative regulation of protein export from nucleus"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042325 "regulation of
phosphorylation" evidence=IEA] [GO:0031436 "BRCA1-BARD1 complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50088 PROSITE:PS50089 SMART:SM00184 SMART:SM00248
InterPro:IPR001357 Prosite:PS00518 GO:GO:0005737 GO:GO:0043066
GO:GO:0042325 GO:GO:0046872 GO:GO:0008270 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0003723 GO:GO:0043065 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GeneTree:ENSGT00550000074487 InterPro:IPR017907 GO:GO:0070531
GO:GO:0031436 OMA:KKNSIKM GO:GO:0046826 GO:GO:0085020
EMBL:DAAA02005860 IPI:IPI00842170 Ensembl:ENSBTAT00000047858
Uniprot:F1MAV4
Length = 772
Score = 219 (82.2 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 54/142 (38%), Positives = 72/142 (50%)
Query: 489 VFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAKGSCTRTLKVLMAILNG 548
V GS LS E++ +L ++ + VTHVI D S TLK ++ IL+G
Sbjct: 566 VLIGSGLSSEQQKMLSELATILKAKKCAEFDGTVTHVIVPGDTVQS---TLKCMLGILSG 622
Query: 549 NWVLKIDWIKACMEAMNPVGEEPYEINLDNHGCEEGPKTGRLRALNKAPKLFDGLSFYFS 608
W+LK +W+KAC+++ EE YEI EGP+ RL PKLFDG FY
Sbjct: 623 CWILKFEWVKACLQSKECEQEEKYEI-------PEGPQKSRLNREQLLPKLFDGCYFYLG 675
Query: 609 GNFMLGYKEDLQSLVITAGGTI 630
G F K++L LV GG I
Sbjct: 676 GTFKHHPKDNLIKLVAAGGGQI 697
Score = 110 (43.8 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 23/70 (32%), Positives = 40/70 (57%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQC-ESECPLCKSQCTYADLRP 90
L +L L+C C N+ P+ L C+HIFC++C+ + C SECP+C + D++
Sbjct: 36 LDRLEKLLRCSRCTNILREPVCLGGCEHIFCSNCV---SDCIGSECPVCYTPAWIQDVKI 92
Query: 91 LAFLENIIAI 100
L+++I +
Sbjct: 93 NRQLDSMIQL 102
Score = 40 (19.1 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 175 SAQPSSHTQAGGIRDCRPAQIDINQLDQLSPCSPPS 210
S+ PS+ + G R ++ +++ LSP +PPS
Sbjct: 357 SSPPSNKLKVGDTLS-RNSRTILDESISLSPGTPPS 391
>MGI|MGI:1328361 [details] [associations]
symbol:Bard1 "BRCA1 associated RING domain 1" species:10090
"Mus musculus" [GO:0003723 "RNA binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0031436 "BRCA1-BARD1 complex" evidence=ISO] [GO:0042325
"regulation of phosphorylation" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO]
[GO:0046826 "negative regulation of protein export from nucleus"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0070531 "BRCA1-A complex" evidence=ISO] [GO:0085020 "protein
K6-linked ubiquitination" evidence=ISO] InterPro:IPR001841
InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088
PROSITE:PS50089 SMART:SM00184 SMART:SM00248 UniPathway:UPA00143
InterPro:IPR001357 MGI:MGI:1328361 Pfam:PF00533 Prosite:PS00518
GO:GO:0005737 GO:GO:0043066 GO:GO:0042803 GO:GO:0042325
GO:GO:0046872 eggNOG:COG0666 GO:GO:0008270 GO:GO:0006281
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0007283 GO:GO:0003723 GO:GO:0043065
GO:GO:0046982 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GeneTree:ENSGT00550000074487 InterPro:IPR017907 GO:GO:0070531
GO:GO:0031436 CTD:580 HOGENOM:HOG000237306 HOVERGEN:HBG050662
KO:K10683 OMA:KKNSIKM OrthoDB:EOG4FFD1B ChiTaRS:BARD1 GO:GO:0046826
GO:GO:0085020 EMBL:AF057157 EMBL:BC128370 EMBL:BC128371
IPI:IPI00118250 RefSeq:NP_031551.1 UniGene:Mm.10764
UniGene:Mm.490738 ProteinModelPortal:O70445 SMR:O70445
IntAct:O70445 STRING:O70445 PhosphoSite:O70445 PRIDE:O70445
Ensembl:ENSMUST00000027393 GeneID:12021 KEGG:mmu:12021
UCSC:uc007bjm.2 InParanoid:A2VCQ1 NextBio:280247 Bgee:O70445
CleanEx:MM_BARD1 Genevestigator:O70445
GermOnline:ENSMUSG00000026196 Uniprot:O70445
Length = 765
Score = 223 (83.6 bits), Expect = 4.5e-20, Sum P(3) = 4.5e-20
Identities = 61/187 (32%), Positives = 94/187 (50%)
Query: 452 PIEKSGHRSIRNRAAPLQLTPQEPSFWGSSP--------NKAKEWVFCGSALSVEEKLLL 503
P++ + + +IR+ L L P+E + +S K VF GS LS +++ +L
Sbjct: 518 PVDYTDNENIRS----LLLLPEENESFSTSQCSIVNTGQRKNGPLVFIGSGLSSQQQKML 573
Query: 504 VRFGNMIGVPVSKFWKPNVTHVIAATDAKGSCTRTLKVLMAILNGNWVLKIDWIKACMEA 563
+ ++ + VTHVI + S TLK ++ IL+G W+LK DW+KAC+++
Sbjct: 574 SKLETVLKAKKCMEFDSTVTHVIVPDEEAQS---TLKCMLGILSGCWILKFDWVKACLDS 630
Query: 564 MNPVGEEPYEINLDNHGCEEGPKTGRLRALNKAPKLFDGLSFYFSGNFMLGYKEDLQSLV 623
EE YE+ G GP+ RL PKLFDG F+ GNF ++DL L+
Sbjct: 631 KVREQEEKYEVP----G---GPQRSRLNREQLLPKLFDGCYFFLGGNFKHHPRDDLLKLI 683
Query: 624 ITAGGTI 630
AGG +
Sbjct: 684 AAAGGKV 690
Score = 106 (42.4 bits), Expect = 4.5e-20, Sum P(3) = 4.5e-20
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQCE-SECPLCKSQCTYADLRP 90
L +L L+C C N+ P+ L C+HIFC+ CI + C S CP+C + DL+
Sbjct: 35 LARLEKLLRCSRCANILKEPVCLGGCEHIFCSGCI---SDCVGSGCPVCYTPAWILDLKI 91
Query: 91 LAFLENIIAI 100
L+++I +
Sbjct: 92 NRQLDSMIQL 101
Score = 37 (18.1 bits), Expect = 4.5e-20, Sum P(3) = 4.5e-20
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 286 SQSTVFRSESLMASKSDSELKSVAALASEKM 316
S + + R E+L DS S L EK+
Sbjct: 203 SVAKINREENLRPETKDSRFDSKEELKEEKV 233
>UNIPROTKB|Q5ZKJ1 [details] [associations]
symbol:BARD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0031436 "BRCA1-BARD1 complex" evidence=IEA] [GO:0042325
"regulation of phosphorylation" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043065 "positive
regulation of apoptotic process" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0046826 "negative regulation of protein export from nucleus"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0070531 "BRCA1-A complex" evidence=IEA]
[GO:0085020 "protein K6-linked ubiquitination" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002110
Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50089
SMART:SM00184 SMART:SM00248 InterPro:IPR001357 Pfam:PF00097
Pfam:PF00533 Prosite:PS00518 GO:GO:0005737 GO:GO:0043066
GO:GO:0042325 GO:GO:0046872 eggNOG:COG0666 GO:GO:0008270
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003723 GO:GO:0043065 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GeneTree:ENSGT00550000074487 InterPro:IPR017907
GO:GO:0070531 GO:GO:0031436 CTD:580 HOGENOM:HOG000237306
HOVERGEN:HBG050662 KO:K10683 OMA:KKNSIKM OrthoDB:EOG4FFD1B
GO:GO:0046826 GO:GO:0085020 EMBL:AADN02034496 EMBL:AJ720093
IPI:IPI00651430 RefSeq:NP_001026417.1 UniGene:Gga.22527 SMR:Q5ZKJ1
STRING:Q5ZKJ1 Ensembl:ENSGALT00000005512 GeneID:424010
KEGG:gga:424010 InParanoid:Q5ZKJ1 NextBio:20826397 Uniprot:Q5ZKJ1
Length = 750
Score = 218 (81.8 bits), Expect = 7.2e-20, Sum P(3) = 7.2e-20
Identities = 57/157 (36%), Positives = 80/157 (50%)
Query: 474 EPSFWGSSPNKAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAKG 533
+PS S P + GS LS +++ LL + ++ + VTHV+
Sbjct: 531 QPSESPSQPRDGPLGIL-GSGLSSKQQKLLNKLATVLKARRCTEFNSTVTHVVVPDVPMP 589
Query: 534 SCTRTLKVLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLDNHGCEEGPKTGRLRAL 593
S T+K +MA+L+G WVLK +W++AC+++ EE YEI + GP+ GRL
Sbjct: 590 S---TVKCMMAVLSGCWVLKFEWVQACLQSTVREQEEKYEI-------QGGPQRGRLNRE 639
Query: 594 NKAPKLFDGLSFYFSGNFMLGYKEDLQSLVITAGGTI 630
PKLFDG FYF G+F K DL LV GG I
Sbjct: 640 QLLPKLFDGCYFYFLGSFNSHQKSDLVELVKAGGGQI 676
Score = 95 (38.5 bits), Expect = 7.2e-20, Sum P(3) = 7.2e-20
Identities = 30/108 (27%), Positives = 49/108 (45%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQCESECPLCKSQCTYADLRPL 91
L++L L C C + P+ L C+H+FC SC+ CP+C D++
Sbjct: 12 LERLERALSCSRCAGVLREPVSLGGCEHVFCLSCM--GDHVGKGCPVCHVPAWVQDMQIN 69
Query: 92 AFLENIIAIYKGL----DASPSSNLLQ---PVYSAFGRHQEDNSSSGQ 132
L++++ + L DA S ++ P+ S FG +NS GQ
Sbjct: 70 RQLDDMVQLCGKLRHLLDAGTSDSMESTPTPMCSDFG----ENSKKGQ 113
Score = 51 (23.0 bits), Expect = 7.2e-20, Sum P(3) = 7.2e-20
Identities = 19/81 (23%), Positives = 32/81 (39%)
Query: 281 KSSGHSQSTVFRSESLMASKSDSELKSVAALASEKMPPISIDSCANNYICGFCQSSRISE 340
K G SQ+ RSE + SDS+ L+ + P + +CG +R S
Sbjct: 298 KLPGTSQTKRRRSEGSLNRNSDSQTSCSEDLSQDCPIPQVTEPRTPVQVCGSAMKTRSSA 357
Query: 341 VTGLMLHYANGKPVVGEEADR 361
+ +L + P + D+
Sbjct: 358 ASSPLLPKSPSTPSTFKACDQ 378
Score = 44 (20.5 bits), Expect = 3.8e-19, Sum P(3) = 3.8e-19
Identities = 16/73 (21%), Positives = 31/73 (42%)
Query: 414 VRSCRRSYHVPCALEISECRWDTENFLVLCPVHSSVKFPIEKSGHRSIRNRAAPLQLTPQ 473
V S + V + E+ + + +N +CPV S + SI ++A L+ +
Sbjct: 237 VDSTKNLVEVEVSPEVKSSQ-EEDNSKAVCPVQVSKETNCAAEKSPSIESKAMHLKRGRE 295
Query: 474 EPSFWGSSPNKAK 486
+ G+S K +
Sbjct: 296 QSKLPGTSQTKRR 308
>UNIPROTKB|Q90X95 [details] [associations]
symbol:bard1 "BRCA1-associated RING domain protein"
species:8355 "Xenopus laevis" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR002110 Pfam:PF00023
PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50089 SMART:SM00184
SMART:SM00248 InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 CTD:580 HOVERGEN:HBG050662 KO:K10683 HSSP:Q99728
EMBL:AF416869 RefSeq:NP_001082131.1 UniGene:Xl.12056
ProteinModelPortal:Q90X95 SMR:Q90X95 IntAct:Q90X95 GeneID:398242
KEGG:xla:398242 Xenbase:XB-GENE-492039 Uniprot:Q90X95
Length = 772
Score = 213 (80.0 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 55/151 (36%), Positives = 72/151 (47%)
Query: 480 SSPNKAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAKGSCTRTL 539
S K + V S L ++ L + M+ + + VTHVI + + RT+
Sbjct: 558 SHQRKEEAVVLIASGLLATQRADLTKLAKMLKASICAEYDSTVTHVIVSDEP---VLRTM 614
Query: 540 KVLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLDNHGCEEGPKTGRLRALNKAPKL 599
K +M IL G W L+ W+KAC+++ N EE YEI HG P RL P+L
Sbjct: 615 KCMMGILAGCWTLQFSWVKACLQSCNREPEESYEIP---HG----PHRARLNGQQMLPQL 667
Query: 600 FDGLSFYFSGNFMLGYKEDLQSLVITAGGTI 630
DG FYF G F KEDL LV AGG I
Sbjct: 668 LDGCHFYFLGCFTEHRKEDLIELVKAAGGQI 698
Score = 101 (40.6 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 20/69 (28%), Positives = 39/69 (56%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQCESECPLCKSQCTYADLRPL 91
L+++ +L C C+ + P+ L C+H+FC +C+ + +ECPLC + D++
Sbjct: 35 LREMERKLCCSKCMFILKDPVCLGGCEHVFCWTCV--NENLGNECPLCNTPAWVRDVQVN 92
Query: 92 AFLENIIAI 100
L+N+I +
Sbjct: 93 RQLDNMIQL 101
>UNIPROTKB|F1P8X2 [details] [associations]
symbol:BARD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0085020 "protein K6-linked ubiquitination"
evidence=IEA] [GO:0070531 "BRCA1-A complex" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0046826 "negative regulation of protein export from nucleus"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042325 "regulation of
phosphorylation" evidence=IEA] [GO:0031436 "BRCA1-BARD1 complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002110 Pfam:PF00023
PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005737 GO:GO:0043066
GO:GO:0042325 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003723 GO:GO:0043065
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 GeneTree:ENSGT00550000074487
InterPro:IPR017907 GO:GO:0070531 GO:GO:0031436 OMA:KKNSIKM
GO:GO:0046826 GO:GO:0085020 EMBL:AAEX03018110 EMBL:AAEX03018111
ProteinModelPortal:F1P8X2 Ensembl:ENSCAFT00000022670 Uniprot:F1P8X2
Length = 728
Score = 225 (84.3 bits), Expect = 7.4e-19, Sum P(3) = 7.4e-19
Identities = 56/142 (39%), Positives = 72/142 (50%)
Query: 489 VFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAKGSCTRTLKVLMAILNG 548
V GS LS E++ +L ++ + VTHVI D S TLK ++ ILNG
Sbjct: 522 VLIGSGLSSEQQKMLSELAAILKAKKCAEFDNTVTHVIVPGDTVQS---TLKCMLGILNG 578
Query: 549 NWVLKIDWIKACMEAMNPVGEEPYEINLDNHGCEEGPKTGRLRALNKAPKLFDGLSFYFS 608
W+LK +W+KAC++ EE YEI EGP RL PKLFDG FYF
Sbjct: 579 CWILKFEWVKACLQRKACEQEEKYEI-------PEGPHRSRLNKEQLLPKLFDGCYFYFG 631
Query: 609 GNFMLGYKEDLQSLVITAGGTI 630
G F K++L LV AGG +
Sbjct: 632 GTFKHHPKDNLIKLVTAAGGQV 653
Score = 76 (31.8 bits), Expect = 7.4e-19, Sum P(3) = 7.4e-19
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 47 NLFSRPLLLP-CDHIFCNSCIPRSAQC-ESECPLCKSQCTYADLRPLAFLENIIAI 100
N+ P+ L C+HIFC++C+ + C + CP+C + D++ L+++I +
Sbjct: 5 NILREPVCLGGCEHIFCSNCV---SDCIGTGCPVCYTPAWIQDVKINRQLDSMIQL 57
Score = 52 (23.4 bits), Expect = 7.4e-19, Sum P(3) = 7.4e-19
Identities = 19/69 (27%), Positives = 31/69 (44%)
Query: 175 SAQPSSHTQAGGIRDCRPAQIDINQLDQLSPCSPPS-FGDIKGSDNESNDQGGELSPESY 233
S+ PSS + G + + + + + LSP +PPS + S+ +LSP S
Sbjct: 312 SSPPSSKLKIGDTLRRKNSNLSVESMT-LSPGTPPSALNSPRYRRMMSSPSATKLSPNSL 370
Query: 234 LANRSVKRG 242
A + RG
Sbjct: 371 TAVKRNHRG 379
>UNIPROTKB|Q99728 [details] [associations]
symbol:BARD1 "BRCA1-associated RING domain protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0005634 "nucleus"
evidence=IMP;IDA] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0006974 "response to DNA damage stimulus"
evidence=NAS] [GO:0031441 "negative regulation of mRNA 3'-end
processing" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0046826 "negative regulation of protein export from nucleus"
evidence=IDA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=NAS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA;NAS] [GO:0016567 "protein ubiquitination"
evidence=NAS] [GO:0001894 "tissue homeostasis" evidence=TAS]
[GO:0042325 "regulation of phosphorylation" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0019900 "kinase binding" evidence=NAS]
[GO:0007050 "cell cycle arrest" evidence=NAS] [GO:0000151
"ubiquitin ligase complex" evidence=NAS] [GO:0031436 "BRCA1-BARD1
complex" evidence=IDA] [GO:0070531 "BRCA1-A complex" evidence=IDA]
[GO:0085020 "protein K6-linked ubiquitination" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] InterPro:IPR001841
InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088
PROSITE:PS50089 SMART:SM00184 SMART:SM00248 UniPathway:UPA00143
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0005737
GO:GO:0043066 GO:GO:0042325 GO:GO:0046872 eggNOG:COG0666
GO:GO:0008270 GO:GO:0006281 Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007050 GO:GO:0007283
GO:GO:0006974 GO:GO:0003723 GO:GO:0019900 GO:GO:0043065
GO:GO:0001894 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0045732 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 Pathway_Interaction_DB:bard1pathway
GO:GO:0070531 GO:GO:0031436 EMBL:U76638 EMBL:AF038042 EMBL:AF038034
EMBL:AF038035 EMBL:AF038036 EMBL:AF038037 EMBL:AF038038
EMBL:AF038039 EMBL:AF038040 EMBL:AF038041 EMBL:AC016708
EMBL:BC126426 IPI:IPI00017746 RefSeq:NP_000456.2 UniGene:Hs.591642
PDB:1JM7 PDB:2NTE PDB:2R1Z PDB:3C5R PDB:3FA2 PDBsum:1JM7
PDBsum:2NTE PDBsum:2R1Z PDBsum:3C5R PDBsum:3FA2
ProteinModelPortal:Q99728 SMR:Q99728 DIP:DIP-5972N IntAct:Q99728
MINT:MINT-207047 STRING:Q99728 PhosphoSite:Q99728 DMDM:116241265
PaxDb:Q99728 PeptideAtlas:Q99728 PRIDE:Q99728
Ensembl:ENST00000260947 GeneID:580 KEGG:hsa:580 UCSC:uc002veu.2
CTD:580 GeneCards:GC02M215556 H-InvDB:HIX0030010 HGNC:HGNC:952
MIM:601593 neXtProt:NX_Q99728 Orphanet:145 PharmGKB:PA25256
HOGENOM:HOG000237306 HOVERGEN:HBG050662 InParanoid:Q99728 KO:K10683
OMA:KKNSIKM OrthoDB:EOG4FFD1B PhylomeDB:Q99728 BindingDB:Q99728
ChEMBL:CHEMBL1741211 ChiTaRS:BARD1 EvolutionaryTrace:Q99728
GenomeRNAi:580 NextBio:2367 ArrayExpress:Q99728 Bgee:Q99728
CleanEx:HS_BARD1 Genevestigator:Q99728 GermOnline:ENSG00000138376
GO:GO:0031441 GO:GO:0046826 GO:GO:0085020 Uniprot:Q99728
Length = 777
Score = 215 (80.7 bits), Expect = 7.5e-19, Sum P(3) = 7.5e-19
Identities = 55/142 (38%), Positives = 71/142 (50%)
Query: 489 VFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAKGSCTRTLKVLMAILNG 548
V GS LS E++ +L ++ + VTHV+ DA S TLK ++ ILNG
Sbjct: 571 VLIGSGLSSEQQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQS---TLKCMLGILNG 627
Query: 549 NWVLKIDWIKACMEAMNPVGEEPYEINLDNHGCEEGPKTGRLRALNKAPKLFDGLSFYFS 608
W+LK +W+KAC+ EE YEI EGP+ RL PKLFDG FY
Sbjct: 628 CWILKFEWVKACLRRKVCEQEEKYEI-------PEGPRRSRLNREQLLPKLFDGCYFYLW 680
Query: 609 GNFMLGYKEDLQSLVITAGGTI 630
G F K++L LV GG I
Sbjct: 681 GTFKHHPKDNLIKLVTAGGGQI 702
Score = 103 (41.3 bits), Expect = 7.5e-19, Sum P(3) = 7.5e-19
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQC-ESECPLCKSQCTYADLRP 90
L +L L+C C N+ P+ L C+HIFC++C+ + C + CP+C + DL+
Sbjct: 41 LDRLEKLLRCSRCTNILREPVCLGGCEHIFCSNCV---SDCIGTGCPVCYTPAWIQDLKI 97
Query: 91 LAFLENIIAI 100
L+++I +
Sbjct: 98 NRQLDSMIQL 107
Score = 37 (18.1 bits), Expect = 7.5e-19, Sum P(3) = 7.5e-19
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 447 SSVKFPIEKSGHRSIRNR-AAPL 468
S P+E +G R NR ++P+
Sbjct: 310 SKKSLPLENNGKRGHHNRLSSPI 332
>UNIPROTKB|G3XAC3 [details] [associations]
symbol:BRCA1 "Breast cancer 1, early onset, isoform CRA_l"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357 Pfam:PF00533
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
EMBL:CH471152 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780 EMBL:AC135721
UniGene:Hs.194143 HGNC:HGNC:1100 ChiTaRS:BRCA1
ProteinModelPortal:G3XAC3 SMR:G3XAC3 PRIDE:G3XAC3
Ensembl:ENST00000351666 ArrayExpress:G3XAC3 Bgee:G3XAC3
Uniprot:G3XAC3
Length = 680
Score = 159 (61.0 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 43/162 (26%), Positives = 72/162 (44%)
Query: 473 QEPSFWGSSPNKAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAK 532
++P S+ K S L+ EE +L+ +F + ++ THV+ TDA+
Sbjct: 452 EKPELTASTERVNKRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAE 511
Query: 533 GSCTRTLKVLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLD--NHGCEEGPKTGRL 590
C RTLK + I G WV+ W+ ++ + E +E+ D N +GPK R
Sbjct: 512 FVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKMLNEHDFEVRGDVVNGRNHQGPKRARE 571
Query: 591 RALNKAPKLFDGLSFYFSGNFMLGYKEDLQSLVITAGGTIWK 632
++ K+F GL G F + L+ +V G ++ K
Sbjct: 572 ---SQDRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVK 610
Score = 126 (49.4 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 34/120 (28%), Positives = 56/120 (46%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
+QK+ L+CP+CL L P+ CDHIFC C+ + + S+CPLCK+ T L+
Sbjct: 18 MQKI---LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 90 PLA-FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSFNNSA 148
F + + + K + A L+ S +E+NS + + + + N A
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRA 134
>UNIPROTKB|E7ETR2 [details] [associations]
symbol:BRCA1 "Breast cancer 1, early onset, isoform CRA_d"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357 Pfam:PF00533
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
EMBL:CH471152 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 CTD:672 KO:K10605
EMBL:AC060780 EMBL:AC135721 IPI:IPI00027277 RefSeq:NP_009229.2
UniGene:Hs.194143 GeneID:672 KEGG:hsa:672 HGNC:HGNC:1100
ChiTaRS:BRCA1 GenomeRNAi:672 SMR:E7ETR2 Ensembl:ENST00000491747
Uniprot:E7ETR2
Length = 759
Score = 159 (61.0 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 43/162 (26%), Positives = 72/162 (44%)
Query: 473 QEPSFWGSSPNKAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAK 532
++P S+ K S L+ EE +L+ +F + ++ THV+ TDA+
Sbjct: 531 EKPELTASTERVNKRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAE 590
Query: 533 GSCTRTLKVLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLD--NHGCEEGPKTGRL 590
C RTLK + I G WV+ W+ ++ + E +E+ D N +GPK R
Sbjct: 591 FVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKMLNEHDFEVRGDVVNGRNHQGPKRARE 650
Query: 591 RALNKAPKLFDGLSFYFSGNFMLGYKEDLQSLVITAGGTIWK 632
++ K+F GL G F + L+ +V G ++ K
Sbjct: 651 ---SQDRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVK 689
Score = 126 (49.4 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 34/120 (28%), Positives = 56/120 (46%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
+QK+ L+CP+CL L P+ CDHIFC C+ + + S+CPLCK+ T L+
Sbjct: 18 MQKI---LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 90 PLA-FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSFNNSA 148
F + + + K + A L+ S +E+NS + + + + N A
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRA 134
>UNIPROTKB|I3L7C9 [details] [associations]
symbol:BRCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000620 "positive regulation of histone H4-K16
acetylation" evidence=IEA] [GO:2000617 "positive regulation of
histone H3-K9 acetylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=IEA]
[GO:0051573 "negative regulation of histone H3-K9 methylation"
evidence=IEA] [GO:0051572 "negative regulation of histone H3-K4
methylation" evidence=IEA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0044030 "regulation of DNA methylation"
evidence=IEA] [GO:0043009 "chordate embryonic development"
evidence=IEA] [GO:0035067 "negative regulation of histone
acetylation" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0007098 "centrosome
cycle" evidence=IEA] [GO:0006349 "regulation of gene expression by
genetic imprinting" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820
GeneTree:ENSGT00440000034289 OMA:CMLKLLN GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 EMBL:FP340289
Ensembl:ENSSSCT00000025436 Uniprot:I3L7C9
Length = 1865
Score = 157 (60.3 bits), Expect = 7.5e-16, Sum P(3) = 7.5e-16
Identities = 50/196 (25%), Positives = 85/196 (43%)
Query: 470 LTPQEPSFWGSSPNKAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAAT 529
++ ++P S+ ++ S L+ +E L+ +F + ++ THVI T
Sbjct: 1630 MSRKKPEVISSTKTNSRRISIVASGLTPKEYTLVQKFARKHYITLTNLITEETTHVIMKT 1689
Query: 530 DAKGSCTRTLKVLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLD--NHGCEEGPKT 587
DA+ C RTLK + I G WV+ W+ ++ + E +E+ D N GPK
Sbjct: 1690 DAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKEGKMLDEHDFEVRGDVVNGRNHRGPKR 1749
Query: 588 GRLRALNKAPKLFDGLSFYFSGNFMLGYKEDLQSLVITAGGTIWKSEGELLAQCRNDETA 647
R ++ K+F GL G F + L+ +V+ G ++ K + T
Sbjct: 1750 ARE---SQDRKIFKGLEICCCGPFTNMPTDQLEWMVLLCGASVVKDPSSFTFR---QGTR 1803
Query: 648 PSKVLVVYNLDFPEGS 663
P V+VV +PE S
Sbjct: 1804 P--VVVVQPDAWPEDS 1817
Score = 132 (51.5 bits), Expect = 7.5e-16, Sum P(3) = 7.5e-16
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
+QK+ L+CP+CL L P+ CDHIFC C+ + + S+CPLCK+ T L+
Sbjct: 16 MQKI---LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 72
Query: 90 PLA-FLENIIAIYKGLDASPSSNLLQPVYSA-FGRHQEDNSSSGQSLSANTLVQVSFNNS 147
F + + + K + A LQ + F + E+NS + + + + N
Sbjct: 73 ESTRFSQLVEELLKIIHAFELDTGLQFANNYNFSKKTENNSPEHLKEEVSIIQSMGYRNR 132
Query: 148 A 148
A
Sbjct: 133 A 133
Score = 54 (24.1 bits), Expect = 7.5e-16, Sum P(3) = 7.5e-16
Identities = 28/97 (28%), Positives = 41/97 (42%)
Query: 174 NSAQPSSHTQAGGIRDCRPAQIDINQLDQLSPCSPPSFGDIKGSDN--ESNDQGGEL--S 229
N QP + A I C D+ D++ + D+K + Q GE S
Sbjct: 1126 NPEQPMGSSHASQI--CSETPDDLLNDDKIKENLNFAESDVKERSAVFSKSAQEGEFKRS 1183
Query: 230 PESYLANRSVKRGFDDRTRQEHRLSSSETAGSFRDSK 266
P S LA+R + +G R +L SSE +GS D +
Sbjct: 1184 P-SPLAHRRLAQGHQ---RWARKLESSEESGSSEDEE 1216
Score = 42 (19.8 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 40/186 (21%), Positives = 73/186 (39%)
Query: 159 LTGMGENKRDG-GQNPNSAQPSSHTQAGGI---RDCRPAQIDINQLDQLSPCSPPSFGDI 214
+ G E +++G G N S + T++G + ++ P + + + P I
Sbjct: 528 IEGTDETEQNGQGMNITSKGHENETKSGNVQKEKNVNPTA-SLGKEPAFRARAEPISSSI 586
Query: 215 KGSDNESNDQGGELSPESYLANRSVKRGFDDRTRQEHRLSS--SETA---GSFRDSKRLK 269
+ E N G + +P++ L +S R +R S S T S S+ +K
Sbjct: 587 SNMELELNIHGSK-APKNRLRRKSSTRQIHALELVVNRNPSPPSHTELQIDSCSSSEEMK 645
Query: 270 GFNYGPDSVGVKSSGHSQSTVFRSESLMASKSDSELKSVAALA-SEKMP-------PISI 321
N D V V+ S + + A K++ + V S+ P P+SI
Sbjct: 646 KRN--SDQVPVRHSKKLHLRGDKEPTTGAKKNNRPHEQVNKRPISDAFPELNLTNVPVSI 703
Query: 322 DSCANN 327
+C+N+
Sbjct: 704 TNCSNS 709
Score = 41 (19.5 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 254 SSSETAGSFRDSKRLK-GFNYGPDSVGVKSSGHSQSTVFRSESLMASKSDSELK 306
SS GS ++ R + G N GP + G Q V++ +++ + +E+K
Sbjct: 1049 SSINEVGSSGENVRAEPGRNRGPKLSAMLRLGLMQPEVYKQSLPVSNCNHTEIK 1102
>UNIPROTKB|G3V8S5 [details] [associations]
symbol:Brca1 "RCG34321, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0000794 "condensed nuclear chromosome"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IEA]
[GO:0007098 "centrosome cycle" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0035067 "negative
regulation of histone acetylation" evidence=IEA] [GO:0043009
"chordate embryonic development" evidence=IEA] [GO:0044030
"regulation of DNA methylation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0051572
"negative regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051573 "negative regulation of histone H3-K9 methylation"
evidence=IEA] [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0070512 "positive regulation of
histone H4-K20 methylation" evidence=IEA] [GO:2000617 "positive
regulation of histone H3-K9 acetylation" evidence=IEA] [GO:2000620
"positive regulation of histone H4-K16 acetylation" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 RGD:2218 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
EMBL:CH473948 InterPro:IPR017907 PANTHER:PTHR13763
InterPro:IPR025994 Pfam:PF12820 GeneTree:ENSGT00440000034289
OMA:CMLKLLN Ensembl:ENSRNOT00000028109 Uniprot:G3V8S5
Length = 1817
Score = 150 (57.9 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 41/123 (33%), Positives = 65/123 (52%)
Query: 30 VLH-LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTY 85
VLH +QK+ L+CP+CL L P+ CDHIFC C+ + + S+CPLCK++ T
Sbjct: 14 VLHAMQKI---LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITK 70
Query: 86 ADLRPLA-FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQ-VS 143
L+ A F + + + K +DA +Q + F ++ NSSS +++Q V
Sbjct: 71 RSLQGSARFSQLVEELLKIIDAFELDTGMQCA-NGFSFSKKKNSSSELLNEDASIIQSVG 129
Query: 144 FNN 146
+ N
Sbjct: 130 YRN 132
Score = 149 (57.5 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 38/161 (23%), Positives = 70/161 (43%)
Query: 474 EPSFWGSSPNKAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAKG 533
+P S ++ S L+ +E +++ +F + ++ THVI TDA+
Sbjct: 1582 KPEVTSSKERAERDISMVVSGLTPKEVMIVQKFAEKYRLALTDVITEETTHVIIKTDAEF 1641
Query: 534 SCTRTLKVLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLD--NHGCEEGPKTGRLR 591
C RTLK + I G W++ W+ ++ + +E+ D +GP+ R
Sbjct: 1642 VCERTLKYFLGIAGGKWIVSYSWVIKSIQERKLLSVHEFEVKGDVVTGSNHQGPRRSR-- 1699
Query: 592 ALNKAPKLFDGLSFYFSGNFMLGYKEDLQSLVITAGGTIWK 632
KLF+GL Y F K++L+ ++ G ++ K
Sbjct: 1700 --ESQEKLFEGLQIYCCEPFTNMPKDELERMLQLCGASVVK 1738
Score = 58 (25.5 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 26/108 (24%), Positives = 40/108 (37%)
Query: 120 FGRHQEDNSSSGQSLSANTLVQVSFNN--SAC-DGQKGKGFELTGMGEN-----KRDGGQ 171
F +H E ++ +T+ +S NN AC + G E+ GEN R+ G
Sbjct: 990 FEKHTE-RGMGNETAVQSTIHTISQNNRGDACQEASSGSVIEVHSTGENVQGQLDRNRGP 1048
Query: 172 NPNSAQPSSHTQAGGIRDCRPAQIDINQLDQLSPCSPPSFGDIKGSDN 219
N+ TQ G + P ++ Q S F SD+
Sbjct: 1049 TVNTVSLLDSTQPGVSKQSAPVSDKYLEIKQESKAVSADFSPCLFSDH 1096
Score = 45 (20.9 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 177 QPSSHTQAGGIRDCRPAQIDINQLDQLSPCSPPSFGDIKGSDNESNDQGG 226
+P+ H + D P + +N+ L+ CS P +G N S ++ G
Sbjct: 675 EPNEHIRKRSASDAFPEEKLMNKAGLLTSCSSPR--KPQGPVNPSPERKG 722
Score = 42 (19.8 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 18/70 (25%), Positives = 28/70 (40%)
Query: 295 SLMASKS-DSELKSVAALASEKMPPISIDSCANNYICGFCQSSRISEV-TGLMLHYANGK 352
SL +S+ DSE V AL S + + G C+S T ++ + K
Sbjct: 1523 SLFSSRDPDSESPKVPALVCTAPASTSALKISQGQVAGSCRSPAAGGADTAVVEIVSKIK 1582
Query: 353 PVVGEEADRS 362
P V +R+
Sbjct: 1583 PEVTSSKERA 1592
>UNIPROTKB|Q6J6I8 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9595 "Gorilla gorilla gorilla" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005694
"chromosome" evidence=ISS] [GO:0031436 "BRCA1-BARD1 complex"
evidence=ISS] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISS] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518
GO:GO:0005694 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 GO:GO:0006633 GO:GO:0007049 GO:GO:0045717
GO:GO:0006310 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
GO:GO:0051865 GO:GO:0031436 GO:GO:0085020 PANTHER:PTHR13763
HOVERGEN:HBG050730 InterPro:IPR025994 Pfam:PF12820 EMBL:AY589042
EMBL:AF019076 ProteinModelPortal:Q6J6I8 SMR:Q6J6I8 Uniprot:Q6J6I8
Length = 1863
Score = 157 (60.3 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 43/162 (26%), Positives = 72/162 (44%)
Query: 473 QEPSFWGSSPNKAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAK 532
++P S+ K S L+ EE +L+ +F + ++ THV+ TDA+
Sbjct: 1635 EKPELTASTERVNKRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAE 1694
Query: 533 GSCTRTLKVLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLD--NHGCEEGPKTGRL 590
C RTLK + I G WV+ W+ ++ + E +E+ D N +GPK R
Sbjct: 1695 FVCERTLKYFLGIAGGKWVVSYFWVTQSIKEGKMLNEHDFEVRGDVVNGRNHQGPKRARE 1754
Query: 591 RALNKAPKLFDGLSFYFSGNFMLGYKEDLQSLVITAGGTIWK 632
++ K+F GL G F + L+ +V G ++ K
Sbjct: 1755 ---SQDRKIFRGLDICCYGPFTNMPTDQLEWMVQLCGASVVK 1793
Score = 124 (48.7 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
+QK+ L+CP+CL L P+ CDHIFC C+ + + S+CPLCK+ T L+
Sbjct: 18 MQKI---LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Score = 53 (23.7 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 355 VGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLKAELAR--GSKLKCS-RCGL 405
V +EA S++ V S E + G + +N++AEL R G KL R G+
Sbjct: 1035 VFKEASSSNINEVGSSTNEVGSSINEVGSSDENIQAELGRNRGPKLNAMLRLGV 1088
Score = 52 (23.4 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 278 VGVKSSGHSQSTVFRSESLMASKSDSELKSVAALASEKMPPISIDSCANN 327
+ + +SGH T + +S+ K+ + ++S+ ++ K I SC +N
Sbjct: 546 MNITNSGHENKT--KGDSIQNEKNPNPIESLEKESAFKTKAEPISSCISN 593
Score = 37 (18.1 bits), Expect = 4.0e-14, Sum P(4) = 4.0e-14
Identities = 16/62 (25%), Positives = 25/62 (40%)
Query: 203 LSPCSP-PSFGDIKGSDN--ESNDQGGELSPESYLANRSVKRGFDDRTRQEHRLSSSETA 259
+ P P SF K N E N + +SPE + N ++ +R R + + A
Sbjct: 980 IPPLFPIKSFVKTKCKKNLLEENFEEHSMSPEREMGNENIPSTVSTISRNNIRENVFKEA 1039
Query: 260 GS 261
S
Sbjct: 1040 SS 1041
>RGD|2218 [details] [associations]
symbol:Brca1 "breast cancer 1, early onset" species:10116 "Rattus
norvegicus" [GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0001726 "ruffle" evidence=ISO] [GO:0003684 "damaged
DNA binding" evidence=ISO;TAS] [GO:0003723 "RNA binding"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO] [GO:0005694
"chromosome" evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005759 "mitochondrial matrix" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0006260 "DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006301 "postreplication
repair" evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006349 "regulation of gene expression by genetic imprinting"
evidence=ISO] [GO:0006633 "fatty acid biosynthetic process"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007098 "centrosome cycle"
evidence=ISO] [GO:0007420 "brain development" evidence=IEP]
[GO:0007584 "response to nutrient" evidence=IEP] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling
pathway in response to DNA damage" evidence=ISO] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=ISO]
[GO:0010033 "response to organic substance" evidence=IEP] [GO:0010212
"response to ionizing radiation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=ISO] [GO:0031436 "BRCA1-BARD1 complex" evidence=ISO;ISS]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0032355
"response to estradiol stimulus" evidence=IEP] [GO:0033993 "response
to lipid" evidence=IEP] [GO:0034446 "substrate adhesion-dependent
cell spreading" evidence=ISO] [GO:0035066 "positive regulation of
histone acetylation" evidence=ISO] [GO:0035067 "negative regulation
of histone acetylation" evidence=ISO] [GO:0043009 "chordate embryonic
development" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043627 "response to estrogen stimulus"
evidence=ISO] [GO:0044030 "regulation of DNA methylation"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISO;ISS] [GO:0045739 "positive
regulation of DNA repair" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0051571 "positive regulation of histone
H3-K4 methylation" evidence=ISO] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=ISO] [GO:0051573 "negative
regulation of histone H3-K9 methylation" evidence=ISO] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=ISO]
[GO:0051865 "protein autoubiquitination" evidence=ISO;ISS]
[GO:0070512 "positive regulation of histone H4-K20 methylation"
evidence=ISO] [GO:0070531 "BRCA1-A complex" evidence=ISO] [GO:0071158
"positive regulation of cell cycle arrest" evidence=ISO] [GO:0071681
"cellular response to indole-3-methanol" evidence=ISO] [GO:0085020
"protein K6-linked ubiquitination" evidence=ISO;ISS] [GO:2000145
"regulation of cell motility" evidence=ISO] [GO:2000617 "positive
regulation of histone H3-K9 acetylation" evidence=ISO] [GO:2000620
"positive regulation of histone H4-K16 acetylation" evidence=ISO]
[GO:0005925 "focal adhesion" evidence=ISO] [GO:0031941 "filamentous
actin" evidence=ISO] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR001357 Pfam:PF00533 RGD:2218
Prosite:PS00518 GO:GO:0005694 GO:GO:0007420 GO:GO:0032355
GO:GO:0005759 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0008270
GO:GO:0006281 GO:GO:0007584 GO:GO:0006633 GO:GO:0045717 GO:GO:0006310
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
GO:GO:0051865 GO:GO:0031436 GO:GO:0085020 eggNOG:NOG274496
PANTHER:PTHR13763 CTD:672 HOGENOM:HOG000230969 HOVERGEN:HBG050730
KO:K10605 OrthoDB:EOG42RD7C InterPro:IPR025994 Pfam:PF12820
GO:GO:0043009 GO:GO:0009048 EMBL:AF036760 EMBL:S82504 EMBL:S82502
EMBL:U60523 EMBL:S82500 IPI:IPI00202716 RefSeq:NP_036646.1
UniGene:Rn.217584 UniGene:Rn.48840 PDB:1L0B PDBsum:1L0B
ProteinModelPortal:O54952 SMR:O54952 STRING:O54952 PhosphoSite:O54952
PRIDE:O54952 GeneID:497672 KEGG:rno:497672 UCSC:RGD:2218
InParanoid:O54952 EvolutionaryTrace:O54952 NextBio:697729
Genevestigator:O54952 GermOnline:ENSRNOG00000020701 GO:GO:0007098
Uniprot:O54952
Length = 1817
Score = 150 (57.9 bits), Expect = 2.4e-15, Sum P(4) = 2.4e-15
Identities = 41/123 (33%), Positives = 65/123 (52%)
Query: 30 VLH-LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTY 85
VLH +QK+ L+CP+CL L P+ CDHIFC C+ + + S+CPLCK++ T
Sbjct: 14 VLHAMQKI---LECPICLELIKEPVSTQCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITK 70
Query: 86 ADLRPLA-FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQ-VS 143
L+ A F + + + K +DA +Q + F ++ NSSS +++Q V
Sbjct: 71 RSLQGSARFSQLVEELLKIIDAFELDTGMQCA-NGFSFSKKKNSSSELLNEDASIIQSVG 129
Query: 144 FNN 146
+ N
Sbjct: 130 YRN 132
Score = 148 (57.2 bits), Expect = 2.4e-15, Sum P(4) = 2.4e-15
Identities = 36/142 (25%), Positives = 65/142 (45%)
Query: 493 SALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAKGSCTRTLKVLMAILNGNWVL 552
S L+ +E +++ +F + ++ THVI TDA+ C RTLK + I G W++
Sbjct: 1601 SGLTPKEVMIVQKFAEKYRLALTDVITEETTHVIIKTDAEFVCERTLKYFLGIAGGKWIV 1660
Query: 553 KIDWIKACMEAMNPVGEEPYEINLD--NHGCEEGPKTGRLRALNKAPKLFDGLSFYFSGN 610
W+ ++ + +E+ D +GP+ R KLF+GL Y
Sbjct: 1661 SYSWVIKSIQERKLLSVHEFEVKGDVVTGSNHQGPRRSR----ESQEKLFEGLQIYCCEP 1716
Query: 611 FMLGYKEDLQSLVITAGGTIWK 632
F K++L+ ++ G ++ K
Sbjct: 1717 FTNMPKDELERMLQLCGASVVK 1738
Score = 61 (26.5 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 26/108 (24%), Positives = 40/108 (37%)
Query: 120 FGRHQEDNSSSGQSLSANTLVQVSFNN--SAC-DGQKGKGFELTGMGEN-----KRDGGQ 171
F +H E ++ +T+ +S NN AC + G E+ GEN R+ G
Sbjct: 990 FEKHTE-RGMGNETAVQSTIHTISLNNRGDACLEASSGSVIEVHSTGENVQGQLDRNRGP 1048
Query: 172 NPNSAQPSSHTQAGGIRDCRPAQIDINQLDQLSPCSPPSFGDIKGSDN 219
N+ TQ G + P ++ Q S F SD+
Sbjct: 1049 KVNTVSLLDSTQPGVSKQSAPVSDKYLEIKQESKAVSADFSPCLFSDH 1096
Score = 45 (20.9 bits), Expect = 2.4e-15, Sum P(4) = 2.4e-15
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 177 QPSSHTQAGGIRDCRPAQIDINQLDQLSPCSPPSFGDIKGSDNESNDQGG 226
+P+ H + D P + +N+ L+ CS P +G N S ++ G
Sbjct: 675 EPNEHIRKRSASDAFPEEKLMNKAGLLTSCSSPR--KPQGPVNPSPERKG 722
Score = 40 (19.1 bits), Expect = 2.4e-15, Sum P(4) = 2.4e-15
Identities = 17/69 (24%), Positives = 29/69 (42%)
Query: 296 LMASKS-DSELKSVAALASEKMPPISIDSCANNYICGFCQSSRISEV-TGLMLHYANGKP 353
L++S+ DSE V+AL S + + G C+S T ++ + KP
Sbjct: 1524 LVSSRDPDSESPKVSALVCTAPASTSALKISQGQVAGSCRSPAAGGADTAVVEIVSKIKP 1583
Query: 354 VVGEEADRS 362
V +R+
Sbjct: 1584 EVTSPKERA 1592
Score = 40 (19.1 bits), Expect = 7.8e-15, Sum P(4) = 7.8e-15
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 255 SSETAGSFRDSKRLKGFNYGPDSVGVKSSGHSQS 288
S+E G F SK++ PD+ + +SG S
Sbjct: 414 SNEVDGCFSSSKKIDLVAPDPDNAVMCTSGRDFS 447
Score = 37 (18.1 bits), Expect = 4.9e-15, Sum P(4) = 4.9e-15
Identities = 20/86 (23%), Positives = 30/86 (34%)
Query: 381 AGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHV--PCALEISECRWDTEN 438
+GD ++ S L SRC +G + R+ + P LE S C
Sbjct: 1444 SGDKESGMRRPSPFKSPLTSSRCSARGHSRSLQNRNSTSQEELLQPAXLEKS-CEPHNLT 1502
Query: 439 FLVLCPVHSSVKFPIEKSGHRSIRNR 464
P P +SG R + +R
Sbjct: 1503 GRSCLPRQDLEGTPYPESGIRLVSSR 1528
>UNIPROTKB|F1MYX8 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9913 "Bos taurus" [GO:2000620 "positive regulation
of histone H4-K16 acetylation" evidence=IEA] [GO:2000617 "positive
regulation of histone H3-K9 acetylation" evidence=IEA] [GO:0070512
"positive regulation of histone H4-K20 methylation" evidence=IEA]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0044030 "regulation of DNA
methylation" evidence=IEA] [GO:0043009 "chordate embryonic
development" evidence=IEA] [GO:0035067 "negative regulation of
histone acetylation" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
PANTHER:PTHR13763 IPI:IPI00687086 UniGene:Bt.14026
InterPro:IPR025994 Pfam:PF12820 GeneTree:ENSGT00440000034289
OMA:CMLKLLN GO:GO:0043009 GO:GO:0009048 GO:GO:0007098
EMBL:DAAA02049201 Ensembl:ENSBTAT00000011616 ArrayExpress:F1MYX8
Uniprot:F1MYX8
Length = 1849
Score = 161 (61.7 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 49/190 (25%), Positives = 80/190 (42%)
Query: 445 VHSSVKFPIEKSGHRSIRNRAAPLQLTPQEPSFWGSSPNKAKEWVFCGSALSVEEKLLLV 504
V S K P + R ++ ++P S+ K S L+ +E +L+
Sbjct: 1600 VEESTKNPAAAHIANTTRCNLREESMSKEKPEVISSTERSKKRLSMVASGLTPKELMLVQ 1659
Query: 505 RFGNMIGVPVSKFWKPNVTHVIAATDAKGSCTRTLKVLMAILNGNWVLKIDWIKACMEAM 564
+F V ++ THVI TD + C RTLK + I G WV+ W+ ++
Sbjct: 1660 KFARKHHVTLTNLITEETTHVIMKTDPEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKEG 1719
Query: 565 NPVGEEPYEINLD--NHGCEEGPKTGRLRALNKAPKLFDGLSFYFSGNFMLGYKEDLQSL 622
+ E +E+ D N +GPK R + +K K+F GL G F + L+ +
Sbjct: 1720 KMLDEHDFEVRGDVVNGRNHQGPKRAR-ESRDK--KIFKGLEICCYGPFTNMPTDQLEWM 1776
Query: 623 VITAGGTIWK 632
V G ++ K
Sbjct: 1777 VQLCGASVVK 1786
Score = 138 (53.6 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 38/136 (27%), Positives = 62/136 (45%)
Query: 17 DSAANSKRSFNPLVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCE 73
D +A+ ++ +QK+ L+CP+CL L P+ CDHIFC C+ + +
Sbjct: 2 DLSADHVEEVQNVLNAMQKI---LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGP 58
Query: 74 SECPLCKSQCTYADLRPLA-FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQ 132
S+CPLCK+ T L+ F + + + K + A LQ S +EDNS
Sbjct: 59 SQCPLCKNDITKRSLQESTRFSQLVEELLKIIHAFELDTGLQFANSYNFSRKEDNSPEHL 118
Query: 133 SLSANTLVQVSFNNSA 148
+ + + + N A
Sbjct: 119 KEEVSIIQSMGYRNRA 134
Score = 37 (18.1 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 396 SKLKCSRCGLKG 407
+KLKC R G G
Sbjct: 498 NKLKCKRRGTSG 509
>UNIPROTKB|Q864U1 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9913 "Bos taurus" [GO:0005694 "chromosome"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0031436 "BRCA1-BARD1 complex" evidence=ISS]
[GO:0085020 "protein K6-linked ubiquitination" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS] [GO:0045717
"negative regulation of fatty acid biosynthetic process"
evidence=ISS] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006633
"fatty acid biosynthetic process" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518
GO:GO:0005694 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 GO:GO:0006633 GO:GO:0007049 GO:GO:0045717
GO:GO:0006310 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
GO:GO:0051865 GO:GO:0031436 GO:GO:0085020 eggNOG:NOG274496
PANTHER:PTHR13763 EMBL:AY077732 IPI:IPI00687086 RefSeq:NP_848668.1
UniGene:Bt.14026 ProteinModelPortal:Q864U1 SMR:Q864U1 STRING:Q864U1
PRIDE:Q864U1 GeneID:353120 KEGG:bta:353120 CTD:672
HOGENOM:HOG000230969 HOVERGEN:HBG050730 InParanoid:Q864U1 KO:K10605
OrthoDB:EOG42RD7C NextBio:20812700 InterPro:IPR025994 Pfam:PF12820
Uniprot:Q864U1
Length = 1849
Score = 161 (61.7 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 49/190 (25%), Positives = 80/190 (42%)
Query: 445 VHSSVKFPIEKSGHRSIRNRAAPLQLTPQEPSFWGSSPNKAKEWVFCGSALSVEEKLLLV 504
V S K P + R ++ ++P S+ K S L+ +E +L+
Sbjct: 1600 VEESTKNPAAAHIANTTRCNLREESMSKEKPEVISSTERSKKRLSMVASGLTPKELMLVQ 1659
Query: 505 RFGNMIGVPVSKFWKPNVTHVIAATDAKGSCTRTLKVLMAILNGNWVLKIDWIKACMEAM 564
+F V ++ THVI TD + C RTLK + I G WV+ W+ ++
Sbjct: 1660 KFARKHHVTLTNLITEETTHVIMKTDPEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKEG 1719
Query: 565 NPVGEEPYEINLD--NHGCEEGPKTGRLRALNKAPKLFDGLSFYFSGNFMLGYKEDLQSL 622
+ E +E+ D N +GPK R + +K K+F GL G F + L+ +
Sbjct: 1720 KMLDEHDFEVRGDVVNGRNHQGPKRAR-ESRDK--KIFKGLEICCYGPFTNMPTDQLEWM 1776
Query: 623 VITAGGTIWK 632
V G ++ K
Sbjct: 1777 VQLCGASVVK 1786
Score = 138 (53.6 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 38/136 (27%), Positives = 62/136 (45%)
Query: 17 DSAANSKRSFNPLVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCE 73
D +A+ ++ +QK+ L+CP+CL L P+ CDHIFC C+ + +
Sbjct: 2 DLSADHVEEVQNVLNAMQKI---LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGP 58
Query: 74 SECPLCKSQCTYADLRPLA-FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQ 132
S+CPLCK+ T L+ F + + + K + A LQ S +EDNS
Sbjct: 59 SQCPLCKNDITKRSLQESTRFSQLVEELLKIIHAFELDTGLQFANSYNFSRKEDNSPEHL 118
Query: 133 SLSANTLVQVSFNNSA 148
+ + + + N A
Sbjct: 119 KEEVSIIQSMGYRNRA 134
Score = 37 (18.1 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 396 SKLKCSRCGLKG 407
+KLKC R G G
Sbjct: 498 NKLKCKRRGTSG 509
>UNIPROTKB|Q6J6J0 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9600 "Pongo pygmaeus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005694
"chromosome" evidence=ISS] [GO:0031436 "BRCA1-BARD1 complex"
evidence=ISS] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISS] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518
GO:GO:0005694 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 GO:GO:0006633 GO:GO:0007049 GO:GO:0045717
GO:GO:0006310 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
GO:GO:0051865 GO:GO:0031436 GO:GO:0085020 eggNOG:NOG274496
PANTHER:PTHR13763 HOGENOM:HOG000230969 HOVERGEN:HBG050730
InterPro:IPR025994 Pfam:PF12820 EMBL:AY589040 EMBL:AF019077
ProteinModelPortal:Q6J6J0 SMR:Q6J6J0 STRING:Q6J6J0
InParanoid:Q6J6J0 Uniprot:Q6J6J0
Length = 1863
Score = 159 (61.0 bits), Expect = 3.8e-15, Sum P(4) = 3.8e-15
Identities = 43/162 (26%), Positives = 72/162 (44%)
Query: 473 QEPSFWGSSPNKAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAK 532
++P S+ K S L+ EE +L+ +F + ++ THV+ TDA+
Sbjct: 1635 EKPELTASTERVNKRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAE 1694
Query: 533 GSCTRTLKVLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLD--NHGCEEGPKTGRL 590
C RTLK + I G WV+ W+ ++ + E +E+ D N +GPK R
Sbjct: 1695 FVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKMLNEHDFEVRGDVVNGRNHQGPKRARE 1754
Query: 591 RALNKAPKLFDGLSFYFSGNFMLGYKEDLQSLVITAGGTIWK 632
++ K+F GL G F + L+ +V G ++ K
Sbjct: 1755 ---SQDRKIFRGLEICCYGPFTNMPTDQLEWIVQLCGASVVK 1793
Score = 129 (50.5 bits), Expect = 3.8e-15, Sum P(4) = 3.8e-15
Identities = 35/120 (29%), Positives = 56/120 (46%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
+QK+ L+CP+CL L P+ CDHIFC C+ + + S+CPLCK+ T L+
Sbjct: 18 MQKI---LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 90 PLA-FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSFNNSA 148
F + + + K + A LQ S +E+NS + + + + N A
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLQYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRA 134
Score = 54 (24.1 bits), Expect = 3.8e-15, Sum P(4) = 3.8e-15
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 355 VGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLKAEL--ARGSKLKCS-RCGL 405
V +EA S++ V S E + G + +N++AEL +RG KL R G+
Sbjct: 1035 VFKEASSSNINEVGSSTNEVGSSINEVGSSDENIQAELGRSRGPKLNAMLRLGV 1088
Score = 43 (20.2 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 462 RNRAAPL-QLTPQEPSFWGSSPN 483
RNRA L Q P+ PS +SP+
Sbjct: 131 RNRAKRLLQSEPENPSLQETSPS 153
Score = 39 (18.8 bits), Expect = 3.8e-15, Sum P(4) = 3.8e-15
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 203 LSPCSP-PSFGDIKGSDN--ESNDQGGELSPESYLANRSV 239
+ P P SF K N E N + +SPE + N ++
Sbjct: 980 IPPLFPIKSFVKTKCKKNLLEENSEEHSMSPEREMGNENI 1019
>UNIPROTKB|Q6J6I9 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9544 "Macaca mulatta" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005694
"chromosome" evidence=ISS] [GO:0031436 "BRCA1-BARD1 complex"
evidence=ISS] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISS] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518
GO:GO:0005694 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 GO:GO:0006633 GO:GO:0007049 GO:GO:0045717
GO:GO:0006310 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
GO:GO:0051865 GO:GO:0031436 GO:GO:0085020 eggNOG:NOG274496
PANTHER:PTHR13763 CTD:672 HOGENOM:HOG000230969 HOVERGEN:HBG050730
KO:K10605 InterPro:IPR025994 Pfam:PF12820 EMBL:AY589041
EMBL:AF019078 EMBL:U44730 PIR:G02999 RefSeq:NP_001108421.1
UniGene:Mmu.17471 ProteinModelPortal:Q6J6I9 SMR:Q6J6I9
STRING:Q6J6I9 GeneID:712634 KEGG:mcc:712634 InParanoid:Q6J6I9
NextBio:19972539 Uniprot:Q6J6I9
Length = 1863
Score = 161 (61.7 bits), Expect = 7.4e-15, Sum P(4) = 7.4e-15
Identities = 48/192 (25%), Positives = 80/192 (41%)
Query: 445 VHSSVKFPIEKSGHRSIRNRAAPLQLTPQEPSFWGSSPNKAKEWVFCGSALSVEEKLLLV 504
V S + P + A ++ + P S+ K S L+ EE +L+
Sbjct: 1607 VAESAQSPAAAHNTNTAGYNAMEESVSRENPKLTASTERVNKRMSLVVSGLTPEEFMLVY 1666
Query: 505 RFGNMIGVPVSKFWKPNVTHVIAATDAKGSCTRTLKVLMAILNGNWVLKIDWIKACMEAM 564
+F + ++ THV+ TDA+ C RTLK + I G WV+ W+ ++
Sbjct: 1667 KFARRYHIALTNLISEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKER 1726
Query: 565 NPVGEEPYEINLD--NHGCEEGPKTGRLRALNKAP--KLFDGLSFYFSGNFMLGYKEDLQ 620
+ E +E+ D N +GPK R ++P K+F GL G F + L+
Sbjct: 1727 KMLNEHDFEVRGDVVNGRNHQGPKRAR-----ESPDRKIFRGLEICCYGPFTNMPTDQLE 1781
Query: 621 SLVITAGGTIWK 632
+V G ++ K
Sbjct: 1782 WMVQLCGASVVK 1793
Score = 126 (49.4 bits), Expect = 7.4e-15, Sum P(4) = 7.4e-15
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
+QK+ L+CP+CL L P+ CDHIFC C+ + + S+CPLCK+ T L+
Sbjct: 18 MQKI---LECPICLELIKEPVSTKCDHIFCRFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 90 PLA-FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQ-VSFNNS 147
F + + + K + A LQ +++ +++N S +++Q + + N
Sbjct: 75 ESTRFSQLVEELLKIIHAFQLDTGLQ-FANSYNFAKKENHSPEHLKDEVSIIQSMGYRNR 133
Query: 148 A 148
A
Sbjct: 134 A 134
Score = 53 (23.7 bits), Expect = 7.4e-15, Sum P(4) = 7.4e-15
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 357 EEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLKAELAR--GSKLKCS-RCGL 405
+EA S++ V S E + G + +N++AEL R G KL R GL
Sbjct: 1037 KEASSSNINEVGSSTNEVGSSINEVGPSDENIQAELGRNRGPKLNAVLRLGL 1088
Score = 40 (19.1 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 38/204 (18%), Positives = 74/204 (36%)
Query: 177 QPSSHTQAGGIRDCRPAQIDINQLDQLSPCSPPSFGDIKGSDNESNDQGGELSPESYLAN 236
QP Q+ I +C+ +I + ++L F SDN G S S + +
Sbjct: 1090 QPEVCKQSLPISNCKHPEIKKQEHEELVQTVNTDFSPCLISDNLEQPMGS--SHASEVCS 1147
Query: 237 RSVKRGFDD-RTRQEHRLSSS---ETAGSFRDSKRLKGFNYGPDSVGVK--SSGHS-QST 289
+ DD +++ +++ E++ F S + + P + G+ ++
Sbjct: 1148 ETPDDLLDDGEIKEDTSFAANDIKESSAVFSKSIQRGELSRSPSPFTHTHLAQGYQKEAK 1207
Query: 290 VFRSESLMASKSDSELKSVAALASEKMPPISIDSCANNYICGFCQSSRISE-VTGLMLHY 348
S S D EL L K+ I + ++ + C S E + L
Sbjct: 1208 KLESSEENLSSEDEELPCFQHLLFGKVSNIPSQTTRHSTVATECLSKNTEENLLSLKNSL 1267
Query: 349 AN-GKPVVGEEADRSHVIHVHSKC 371
+ V+ +A + H + +KC
Sbjct: 1268 TDCSNQVILAKASQEHHLSEETKC 1291
Score = 38 (18.4 bits), Expect = 7.4e-15, Sum P(4) = 7.4e-15
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 203 LSPCSP-PSFGDIKGSDN--ESNDQGGELSPESYLANRSV 239
+ P P SF K + N E N + +SPE + N ++
Sbjct: 979 IPPLFPVKSFVKTKCNKNLLEENSEEHSVSPERAVGNENI 1018
Score = 37 (18.1 bits), Expect = 6.2e-14, Sum P(3) = 6.2e-14
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 380 YAGDTVKNLKAELARGSKLKCS 401
+A DT LK GS CS
Sbjct: 691 HASDTFPELKLTKVPGSFTNCS 712
>UNIPROTKB|P38398 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006633 "fatty acid biosynthetic process"
evidence=IEA] [GO:0046600 "negative regulation of centriole
replication" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0015631 "tubulin binding" evidence=NAS]
[GO:0008274 "gamma-tubulin ring complex" evidence=NAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=NAS;TAS] [GO:0006978 "DNA
damage response, signal transduction by p53 class mediator
resulting in transcription of p21 class mediator" evidence=TAS]
[GO:0006359 "regulation of transcription from RNA polymerase III
promoter" evidence=TAS] [GO:0042127 "regulation of cell
proliferation" evidence=TAS] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043627 "response to estrogen stimulus"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=NAS] [GO:0050681 "androgen receptor binding"
evidence=NAS] [GO:0000151 "ubiquitin ligase complex" evidence=NAS]
[GO:0031436 "BRCA1-BARD1 complex" evidence=IDA] [GO:0045739
"positive regulation of DNA repair" evidence=IMP] [GO:0031572 "G2
DNA damage checkpoint" evidence=IMP] [GO:0010212 "response to
ionizing radiation" evidence=IMP] [GO:0006302 "double-strand break
repair" evidence=IMP;TAS] [GO:0070531 "BRCA1-A complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0007059 "chromosome segregation"
evidence=IMP] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IDA] [GO:0045717 "negative regulation of
fatty acid biosynthetic process" evidence=IMP] [GO:0030521
"androgen receptor signaling pathway" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0071681
"cellular response to indole-3-methanol" evidence=IDA] [GO:0051865
"protein autoubiquitination" evidence=IDA] [GO:0085020 "protein
K6-linked ubiquitination" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0005694 "chromosome" evidence=ISS]
[GO:0003677 "DNA binding" evidence=TAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006974 "response to DNA damage stimulus" evidence=TAS]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0008630 "intrinsic
apoptotic signaling pathway in response to DNA damage"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IDA;TAS] [GO:0006301 "postreplication
repair" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281
"DNA repair" evidence=TAS] [GO:0031941 "filamentous actin"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0001726 "ruffle" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=IDA] [GO:2000145 "regulation of cell motility"
evidence=IDA] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=IDA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0035066 "positive regulation of
histone acetylation" evidence=IDA] [GO:0051571 "positive regulation
of histone H3-K4 methylation" evidence=IDA] [GO:0051573 "negative
regulation of histone H3-K9 methylation" evidence=IDA] [GO:0070512
"positive regulation of histone H4-K20 methylation" evidence=IDA]
[GO:2000617 "positive regulation of histone H3-K9 acetylation"
evidence=IDA] [GO:2000620 "positive regulation of histone H4-K16
acetylation" evidence=IDA] Reactome:REACT_216 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR001357 Pfam:PF00097 Pfam:PF00533 Prosite:PS00518
GO:GO:0005886 GO:GO:0045892 GO:GO:0005694 Reactome:REACT_115566
GO:GO:0008630 GO:GO:0007059 GO:GO:0005654 GO:GO:0030521
GO:GO:0071158 Pathway_Interaction_DB:aurora_a_pathway Orphanet:1331
GO:GO:0046872 GO:GO:0008270 Pathway_Interaction_DB:hnf3apathway
GO:GO:0045944 GO:GO:0006633 GO:GO:0003723 GO:GO:0010212
GO:GO:0042127 GO:GO:0044212 GO:GO:0007049 GO:GO:2000145
GO:GO:0003713 PDB:3COJ PDBsum:3COJ GO:GO:0045717
Reactome:REACT_111183 GO:GO:0030529 GO:GO:0001726 GO:GO:0043627
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000724 GO:GO:0031398
GO:GO:0004842 GO:GO:0034446 MIM:114480
Pathway_Interaction_DB:ar_pathway GO:GO:0015631 GO:GO:0050681
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0045739
InterPro:IPR017907 GO:GO:0051865
Pathway_Interaction_DB:bard1pathway GO:GO:0031572 GO:GO:0070531
GO:GO:0031436 PDB:1JM7 PDBsum:1JM7 Orphanet:145 GO:GO:0085020
GO:GO:0006301 eggNOG:NOG274496 PANTHER:PTHR13763 CTD:672
HOGENOM:HOG000230969 HOVERGEN:HBG050730 KO:K10605 OrthoDB:EOG42RD7C
InterPro:IPR025994 Pfam:PF12820 EMBL:U14680 EMBL:L78833 EMBL:U64805
EMBL:AF005068 EMBL:DQ190450 EMBL:DQ190451 EMBL:DQ190452
EMBL:DQ190453 EMBL:DQ190454 EMBL:DQ190455 EMBL:DQ190456
EMBL:AY273801 EMBL:AC060780 EMBL:AC135721 EMBL:BC072418
IPI:IPI00027272 IPI:IPI00027277 IPI:IPI00185298 IPI:IPI00218982
IPI:IPI00909467 IPI:IPI00945705 PIR:A58881 RefSeq:NP_009225.1
RefSeq:NP_009228.2 RefSeq:NP_009229.2 RefSeq:NP_009230.2
RefSeq:NP_009231.2 UniGene:Hs.194143 PDB:1JNX PDB:1N5O PDB:1OQA
PDB:1T15 PDB:1T29 PDB:1T2U PDB:1T2V PDB:1Y98 PDB:2ING PDB:3K0H
PDB:3K0K PDB:3K15 PDB:3K16 PDB:3PXA PDB:3PXB PDB:3PXC PDB:3PXD
PDB:3PXE PDBsum:1JNX PDBsum:1N5O PDBsum:1OQA PDBsum:1T15
PDBsum:1T29 PDBsum:1T2U PDBsum:1T2V PDBsum:1Y98 PDBsum:2ING
PDBsum:3K0H PDBsum:3K0K PDBsum:3K15 PDBsum:3K16 PDBsum:3PXA
PDBsum:3PXB PDBsum:3PXC PDBsum:3PXD PDBsum:3PXE DisProt:DP00238
ProteinModelPortal:P38398 SMR:P38398 DIP:DIP-5971N IntAct:P38398
MINT:MINT-90433 STRING:P38398 PhosphoSite:P38398 DMDM:728984
PaxDb:P38398 PRIDE:P38398 DNASU:672 Ensembl:ENST00000352993
Ensembl:ENST00000357654 Ensembl:ENST00000468300 GeneID:672
KEGG:hsa:672 UCSC:uc002icp.4 UCSC:uc002icq.3 UCSC:uc010whl.2
GeneCards:GC17M041197 HGNC:HGNC:1100 HPA:CAB001946 HPA:CAB018369
HPA:HPA034966 MIM:113705 MIM:167000 MIM:604370 MIM:614320
neXtProt:NX_P38398 Orphanet:1333 Orphanet:168829 PharmGKB:PA25411
InParanoid:P38398 BindingDB:P38398 ChEMBL:CHEMBL5990 ChiTaRS:BRCA1
EvolutionaryTrace:P38398 GenomeRNAi:672 NextBio:2752
PMAP-CutDB:P38398 ArrayExpress:P38398 Bgee:P38398 CleanEx:HS_BRCA1
Genevestigator:P38398 GermOnline:ENSG00000012048 GO:GO:0008274
GO:GO:0071681 GO:GO:0006978 GO:GO:0046600 GO:GO:0051573
GO:GO:0051571 GO:GO:2000617 GO:GO:2000620 GO:GO:0070512
GO:GO:0006359 Uniprot:P38398
Length = 1863
Score = 159 (61.0 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 43/162 (26%), Positives = 72/162 (44%)
Query: 473 QEPSFWGSSPNKAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAK 532
++P S+ K S L+ EE +L+ +F + ++ THV+ TDA+
Sbjct: 1635 EKPELTASTERVNKRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAE 1694
Query: 533 GSCTRTLKVLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLD--NHGCEEGPKTGRL 590
C RTLK + I G WV+ W+ ++ + E +E+ D N +GPK R
Sbjct: 1695 FVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKMLNEHDFEVRGDVVNGRNHQGPKRARE 1754
Query: 591 RALNKAPKLFDGLSFYFSGNFMLGYKEDLQSLVITAGGTIWK 632
++ K+F GL G F + L+ +V G ++ K
Sbjct: 1755 ---SQDRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVK 1793
Score = 126 (49.4 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 34/120 (28%), Positives = 56/120 (46%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
+QK+ L+CP+CL L P+ CDHIFC C+ + + S+CPLCK+ T L+
Sbjct: 18 MQKI---LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 90 PLA-FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSFNNSA 148
F + + + K + A L+ S +E+NS + + + + N A
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRA 134
Score = 52 (23.4 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 355 VGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLKAELAR--GSKLKCS-RCGL 405
V +EA S++ V S E + G + +N++AEL R G KL R G+
Sbjct: 1035 VFKEASSSNINEVGSSTNEVGSSINEIGSSDENIQAELGRNRGPKLNAMLRLGV 1088
Score = 39 (18.8 bits), Expect = 6.3e-14, Sum P(3) = 6.3e-14
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 383 DTVKNLKAELARGSKLKCS 401
DT LK A GS KCS
Sbjct: 695 DTFPELKLTNAPGSFTKCS 713
Score = 38 (18.4 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 202 QLSPCSP-PSFGDIKGSDN--ESNDQGGELSPESYLANRSVKRGFDDRTRQEHRLSSSET 258
++ P P SF K N E N + +SPE + N ++ +R R + +
Sbjct: 979 RIPPLFPIKSFVKTKCKKNLLEENFEEHSMSPEREMGNENIPSTVSTISRNNIRENVFKE 1038
Query: 259 AGS 261
A S
Sbjct: 1039 ASS 1041
>UNIPROTKB|Q9GKK8 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9598 "Pan troglodytes" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005694 "chromosome" evidence=ISS] [GO:0006359 "regulation of
transcription from RNA polymerase III promoter" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006978 "DNA
damage response, signal transduction by p53 class mediator
resulting in transcription of p21 class mediator" evidence=TAS]
[GO:0008274 "gamma-tubulin ring complex" evidence=NAS] [GO:0015631
"tubulin binding" evidence=NAS] [GO:0031436 "BRCA1-BARD1 complex"
evidence=ISS] [GO:0042127 "regulation of cell proliferation"
evidence=TAS] [GO:0042981 "regulation of apoptotic process"
evidence=TAS] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISS] [GO:0045739 "positive
regulation of DNA repair" evidence=NAS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0046600 "negative regulation of centriole replication"
evidence=NAS] [GO:0051865 "protein autoubiquitination"
evidence=ISS] [GO:0085020 "protein K6-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0006915
GO:GO:0005694 GO:GO:0045893 GO:GO:0042981 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 GO:GO:0006633
GO:GO:0042127 GO:GO:0007049 GO:GO:0045717 GO:GO:0006310
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0015631
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0045739
InterPro:IPR017907 GO:GO:0051865 GO:GO:0031436 GO:GO:0085020
eggNOG:NOG274496 PANTHER:PTHR13763 CTD:672 HOGENOM:HOG000230969
HOVERGEN:HBG050730 KO:K10605 OrthoDB:EOG42RD7C InterPro:IPR025994
Pfam:PF12820 GO:GO:0008274 GO:GO:0006978 GO:GO:0046600
GO:GO:0006359 EMBL:AF207822 EMBL:AY365046 EMBL:AF019075
RefSeq:NP_001038958.1 UniGene:Ptr.6298 ProteinModelPortal:Q9GKK8
SMR:Q9GKK8 STRING:Q9GKK8 GeneID:449497 KEGG:ptr:449497
InParanoid:Q9GKK8 NextBio:20832624 Uniprot:Q9GKK8
Length = 1863
Score = 159 (61.0 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 43/162 (26%), Positives = 72/162 (44%)
Query: 473 QEPSFWGSSPNKAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAK 532
++P S+ K S L+ EE +L+ +F + ++ THV+ TDA+
Sbjct: 1635 EKPELTASTERVNKRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAE 1694
Query: 533 GSCTRTLKVLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLD--NHGCEEGPKTGRL 590
C RTLK + I G WV+ W+ ++ + E +E+ D N +GPK R
Sbjct: 1695 FVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKMLNEHDFEVRGDVVNGRNHQGPKRARE 1754
Query: 591 RALNKAPKLFDGLSFYFSGNFMLGYKEDLQSLVITAGGTIWK 632
++ K+F GL G F + L+ +V G ++ K
Sbjct: 1755 ---SQDRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVK 1793
Score = 126 (49.4 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 34/120 (28%), Positives = 56/120 (46%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
+QK+ L+CP+CL L P+ CDHIFC C+ + + S+CPLCK+ T L+
Sbjct: 18 MQKI---LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 90 PLA-FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSFNNSA 148
F + + + K + A L+ S +E+NS + + + + N A
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRA 134
Score = 53 (23.7 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 355 VGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLKAELAR--GSKLKCS-RCGL 405
V +EA S++ V S E + G + +N++AEL R G KL R G+
Sbjct: 1035 VFKEASSSNINEVGSSTNEVGSSINEVGSSDENIQAELGRNRGPKLNAMLRLGV 1088
Score = 37 (18.1 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 16/62 (25%), Positives = 25/62 (40%)
Query: 203 LSPCSP-PSFGDIKGSDN--ESNDQGGELSPESYLANRSVKRGFDDRTRQEHRLSSSETA 259
+ P P SF K N E N + +SPE + N ++ +R R + + A
Sbjct: 980 IPPLFPIKSFVKTKCKKNLLEENFEEHSMSPEREMGNENIPSTVSTISRNNIRENVFKEA 1039
Query: 260 GS 261
S
Sbjct: 1040 SS 1041
>UNIPROTKB|E9PFC7 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0007420
GO:GO:0032355 GO:GO:0005759 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0007584
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820 EMBL:AC060780
EMBL:AC135721 IPI:IPI00945705 RefSeq:NP_009231.2 GeneID:672
HGNC:HGNC:1100 ChiTaRS:BRCA1 OMA:CMLKLLN GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 ProteinModelPortal:E9PFC7 SMR:E9PFC7
Ensembl:ENST00000471181 UCSC:uc002ict.3 ArrayExpress:E9PFC7
Bgee:E9PFC7 Uniprot:E9PFC7
Length = 1884
Score = 159 (61.0 bits), Expect = 1.6e-14, Sum P(4) = 1.6e-14
Identities = 43/162 (26%), Positives = 72/162 (44%)
Query: 473 QEPSFWGSSPNKAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAK 532
++P S+ K S L+ EE +L+ +F + ++ THV+ TDA+
Sbjct: 1656 EKPELTASTERVNKRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAE 1715
Query: 533 GSCTRTLKVLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLD--NHGCEEGPKTGRL 590
C RTLK + I G WV+ W+ ++ + E +E+ D N +GPK R
Sbjct: 1716 FVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKMLNEHDFEVRGDVVNGRNHQGPKRARE 1775
Query: 591 RALNKAPKLFDGLSFYFSGNFMLGYKEDLQSLVITAGGTIWK 632
++ K+F GL G F + L+ +V G ++ K
Sbjct: 1776 ---SQDRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVK 1814
Score = 126 (49.4 bits), Expect = 1.6e-14, Sum P(4) = 1.6e-14
Identities = 34/120 (28%), Positives = 56/120 (46%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
+QK+ L+CP+CL L P+ CDHIFC C+ + + S+CPLCK+ T L+
Sbjct: 18 MQKI---LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 90 PLA-FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSFNNSA 148
F + + + K + A L+ S +E+NS + + + + N A
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRA 134
Score = 52 (23.4 bits), Expect = 1.6e-14, Sum P(4) = 1.6e-14
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 355 VGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLKAELAR--GSKLKCS-RCGL 405
V +EA S++ V S E + G + +N++AEL R G KL R G+
Sbjct: 1035 VFKEASSSNINEVGSSTNEVGSSINEIGSSDENIQAELGRNRGPKLNAMLRLGV 1088
Score = 39 (18.8 bits), Expect = 6.5e-14, Sum P(3) = 6.5e-14
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 383 DTVKNLKAELARGSKLKCS 401
DT LK A GS KCS
Sbjct: 695 DTFPELKLTNAPGSFTKCS 713
Score = 38 (18.4 bits), Expect = 1.6e-14, Sum P(4) = 1.6e-14
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 202 QLSPCSP-PSFGDIKGSDN--ESNDQGGELSPESYLANRSVKRGFDDRTRQEHRLSSSET 258
++ P P SF K N E N + +SPE + N ++ +R R + +
Sbjct: 979 RIPPLFPIKSFVKTKCKKNLLEENFEEHSMSPEREMGNENIPSTVSTISRNNIRENVFKE 1038
Query: 259 AGS 261
A S
Sbjct: 1039 ASS 1041
>UNIPROTKB|Q95153 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9615 "Canis lupus familiaris" [GO:0005694
"chromosome" evidence=ISS] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0031436 "BRCA1-BARD1 complex"
evidence=ISS] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=ISS] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006633 "fatty acid biosynthetic process"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0005694
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006281
GO:GO:0006633 GO:GO:0007049 GO:GO:0045717 GO:GO:0006310
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907 GO:GO:0051865
GO:GO:0031436 GO:GO:0085020 eggNOG:NOG274496 PANTHER:PTHR13763
CTD:672 HOGENOM:HOG000230969 HOVERGEN:HBG050730 KO:K10605
OrthoDB:EOG42RD7C InterPro:IPR025994 Pfam:PF12820 EMBL:U50709
RefSeq:NP_001013434.1 UniGene:Cfa.140 ProteinModelPortal:Q95153
SMR:Q95153 STRING:Q95153 GeneID:403437 KEGG:cfa:403437
InParanoid:Q95153 NextBio:20816955 Uniprot:Q95153
Length = 1878
Score = 150 (57.9 bits), Expect = 2.8e-14, Sum P(4) = 2.8e-14
Identities = 43/164 (26%), Positives = 72/164 (43%)
Query: 473 QEPSFWGSSPNKAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAK 532
++P S+ K S L+ +E +L+ +F + ++ THVI TDA+
Sbjct: 1638 EKPEVISSTRGVNKRISMVASGLTPKEFMLVHKFARKHHISLTNLISEETTHVIMKTDAE 1697
Query: 533 GSCTRTLKVLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLD--NHGCEEGPKTGRL 590
C RTLK + I G WV+ W+ ++ + E +E+ D N +GPK R
Sbjct: 1698 FVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKILDEHDFEVRGDVVNGRNHQGPKRARE 1757
Query: 591 RALNKAP--KLFDGLSFYFSGNFMLGYKEDLQSLVITAGGTIWK 632
++ K+F GL G F + L+ +V G ++ K
Sbjct: 1758 SQDRESQDRKIFRGLEICCYGPFTNMPTDQLEWMVHLCGASVVK 1801
Score = 131 (51.2 bits), Expect = 2.8e-14, Sum P(4) = 2.8e-14
Identities = 37/136 (27%), Positives = 62/136 (45%)
Query: 17 DSAANSKRSFNPLVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCE 73
D +A+ ++ +QK+ L+CP+CL L P+ CDHIFC C+ + +
Sbjct: 2 DLSADRVEEVQNVLNAMQKI---LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGP 58
Query: 74 SECPLCKSQCTYADLRPLA-FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQ 132
S+CPLCK+ T L+ F + + + K + A LQ S +E+NS
Sbjct: 59 SQCPLCKNDITKRSLQESTRFSQLVEELLKIIHAFELDTGLQFADSYNFSKKENNSPEHL 118
Query: 133 SLSANTLVQVSFNNSA 148
+ + + + N A
Sbjct: 119 KEEVSIIQSMGYRNRA 134
Score = 55 (24.4 bits), Expect = 2.8e-14, Sum P(4) = 2.8e-14
Identities = 22/74 (29%), Positives = 32/74 (43%)
Query: 335 SSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLKAELAR 394
+ R+ + T + N + +E S V V S E V G + +N++AEL R
Sbjct: 1015 NERVIQSTVSTISQNNIRECASKEVGSSSVNEVVSSTNEVGSSVNEVGSSGENIQAELGR 1074
Query: 395 --GSKLKCS-RCGL 405
G KL R GL
Sbjct: 1075 NRGPKLNAMLRLGL 1088
Score = 37 (18.1 bits), Expect = 2.8e-14, Sum P(4) = 2.8e-14
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 213 DIKGSDNESNDQGGELSPE 231
+I SD +S+D+G EL+ E
Sbjct: 388 EILTSD-DSHDRGSELNTE 405
>UNIPROTKB|F1PAI7 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9615 "Canis lupus familiaris" [GO:2000620
"positive regulation of histone H4-K16 acetylation" evidence=IEA]
[GO:2000617 "positive regulation of histone H3-K9 acetylation"
evidence=IEA] [GO:0070512 "positive regulation of histone H4-K20
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0051573 "negative
regulation of histone H3-K9 methylation" evidence=IEA] [GO:0051572
"negative regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051571 "positive regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0035067 "negative regulation of histone acetylation"
evidence=IEA] [GO:0009048 "dosage compensation by inactivation of X
chromosome" evidence=IEA] [GO:0007098 "centrosome cycle"
evidence=IEA] [GO:0006349 "regulation of gene expression by genetic
imprinting" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820
GeneTree:ENSGT00440000034289 OMA:CMLKLLN GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 EMBL:AAEX03006439 EMBL:AAEX03006438
Ensembl:ENSCAFT00000023190 Uniprot:F1PAI7
Length = 1882
Score = 150 (57.9 bits), Expect = 2.9e-14, Sum P(4) = 2.9e-14
Identities = 43/164 (26%), Positives = 72/164 (43%)
Query: 473 QEPSFWGSSPNKAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAK 532
++P S+ K S L+ +E +L+ +F + ++ THVI TDA+
Sbjct: 1642 EKPEVISSTRGVNKRISMVASGLTPKEFMLVHKFARKHHISLTNLISEETTHVIMKTDAE 1701
Query: 533 GSCTRTLKVLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLD--NHGCEEGPKTGRL 590
C RTLK + I G WV+ W+ ++ + E +E+ D N +GPK R
Sbjct: 1702 FVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKILDEHDFEVRGDVVNGRNHQGPKRARE 1761
Query: 591 RALNKAP--KLFDGLSFYFSGNFMLGYKEDLQSLVITAGGTIWK 632
++ K+F GL G F + L+ +V G ++ K
Sbjct: 1762 SQDRESQDRKIFRGLEICCYGPFTNMPTDQLEWMVHLCGASVVK 1805
Score = 131 (51.2 bits), Expect = 2.9e-14, Sum P(4) = 2.9e-14
Identities = 37/136 (27%), Positives = 62/136 (45%)
Query: 17 DSAANSKRSFNPLVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCE 73
D +A+ ++ +QK+ L+CP+CL L P+ CDHIFC C+ + +
Sbjct: 2 DLSADRVEEVQNVLNAMQKI---LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQRKGP 58
Query: 74 SECPLCKSQCTYADLRPLA-FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQ 132
S+CPLCK+ T L+ F + + + K + A LQ S +E+NS
Sbjct: 59 SQCPLCKNDITKRSLQESTRFSQLVEELLKIIHAFELDTGLQFADSYNFSKKENNSPEHL 118
Query: 133 SLSANTLVQVSFNNSA 148
+ + + + N A
Sbjct: 119 KEEVSIIQSMGYRNRA 134
Score = 55 (24.4 bits), Expect = 2.9e-14, Sum P(4) = 2.9e-14
Identities = 22/74 (29%), Positives = 32/74 (43%)
Query: 335 SSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLKAELAR 394
+ R+ + T + N + +E S V V S E V G + +N++AEL R
Sbjct: 1016 NERVIQSTVSTISQNNIRECASKEVGSSSVNEVVSSTNEVGSSVNEVGSSGENIQAELGR 1075
Query: 395 --GSKLKCS-RCGL 405
G KL R GL
Sbjct: 1076 NRGPKLNAMLRLGL 1089
Score = 37 (18.1 bits), Expect = 2.9e-14, Sum P(4) = 2.9e-14
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 213 DIKGSDNESNDQGGELSPE 231
+I SD +S+D+G EL+ E
Sbjct: 389 EILTSD-DSHDRGSELNTE 406
>MGI|MGI:104537 [details] [associations]
symbol:Brca1 "breast cancer 1" species:10090 "Mus musculus"
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IDA] [GO:0003723 "RNA binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005694 "chromosome" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005759 "mitochondrial
matrix" evidence=ISO] [GO:0005813 "centrosome" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006260 "DNA
replication" evidence=IMP] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006301 "postreplication repair" evidence=ISO] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IMP] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006631 "fatty acid metabolic
process" evidence=IEA] [GO:0006633 "fatty acid biosynthetic
process" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=ISO] [GO:0007098
"centrosome cycle" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling pathway in
response to DNA damage" evidence=ISO] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=IDA]
[GO:0010212 "response to ionizing radiation" evidence=ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=ISO] [GO:0031436 "BRCA1-BARD1 complex" evidence=ISO]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0035066 "positive regulation of histone acetylation"
evidence=ISO;IMP] [GO:0035067 "negative regulation of histone
acetylation" evidence=IMP] [GO:0043009 "chordate embryonic
development" evidence=IMP] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043627 "response to estrogen stimulus"
evidence=ISO] [GO:0044030 "regulation of DNA methylation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045717 "negative regulation of
fatty acid biosynthetic process" evidence=ISO] [GO:0045739
"positive regulation of DNA repair" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051298 "centrosome duplication"
evidence=TAS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISO;IMP] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IMP] [GO:0051573 "negative
regulation of histone H3-K9 methylation" evidence=ISO;IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0051865 "protein autoubiquitination"
evidence=ISO] [GO:0070512 "positive regulation of histone H4-K20
methylation" evidence=ISO;IMP] [GO:0070531 "BRCA1-A complex"
evidence=ISO] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=ISO] [GO:0071681 "cellular response to
indole-3-methanol" evidence=ISO] [GO:0085020 "protein K6-linked
ubiquitination" evidence=ISO] [GO:2000145 "regulation of cell
motility" evidence=ISO] [GO:2000617 "positive regulation of histone
H3-K9 acetylation" evidence=ISO;IMP] [GO:2000620 "positive
regulation of histone H4-K16 acetylation" evidence=ISO;IMP]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR001357 MGI:MGI:104537 Pfam:PF00533 Prosite:PS00518
GO:GO:0005737 GO:GO:0005813 GO:GO:0008630 GO:GO:0005654
GO:GO:0051298 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0045944 GO:GO:0006633
GO:GO:0003723 GO:GO:0044212 GO:GO:0045717 Reactome:REACT_118161
Reactome:REACT_120463 Reactome:REACT_75800 GO:GO:0006310
GO:GO:0030529 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794
GO:GO:0004842 GO:GO:0006349 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 GO:GO:0051865
Reactome:REACT_27235 GO:GO:0031436 GO:GO:0085020 GO:GO:0051572
eggNOG:NOG274496 PANTHER:PTHR13763 CTD:672 HOGENOM:HOG000230969
HOVERGEN:HBG050730 KO:K10605 OrthoDB:EOG42RD7C InterPro:IPR025994
Pfam:PF12820 GO:GO:0051573 GO:GO:0051571 GO:GO:2000617
GO:GO:2000620 GO:GO:0070512 EMBL:U31625 EMBL:U35641 EMBL:U32446
EMBL:U36475 EMBL:AL590996 EMBL:U33835 IPI:IPI00331711
IPI:IPI00421063 PIR:I49350 RefSeq:NP_033894.3 UniGene:Mm.244975
ProteinModelPortal:P48754 DIP:DIP-41981N STRING:P48754
PhosphoSite:P48754 PRIDE:P48754 Ensembl:ENSMUST00000017290
GeneID:12189 KEGG:mmu:12189 GeneTree:ENSGT00440000034289
InParanoid:P48754 OMA:CMLKLLN NextBio:280581 CleanEx:MM_BRCA1
Genevestigator:P48754 GermOnline:ENSMUSG00000017146 GO:GO:0043009
GO:GO:0009048 GO:GO:0035067 GO:GO:0051574 GO:GO:0044030
Uniprot:P48754
Length = 1812
Score = 142 (55.0 bits), Expect = 1.4e-13, Sum P(4) = 1.4e-13
Identities = 40/164 (24%), Positives = 70/164 (42%)
Query: 474 EPSFWGSSPNKAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAKG 533
+P S ++ S L+ +E + + +F + ++ THVI TDA+
Sbjct: 1579 KPELTSSEERADRDISMVVSGLTPKEVMTVQKFAEKYRLTLTDAITEETTHVIIKTDAEF 1638
Query: 534 SCTRTLKVLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLD-----NHGCEEGPKTG 588
C RTLK + I G W++ W+ ++ + +E+ D NH +GP+
Sbjct: 1639 VCERTLKYFLGIAGGKWIVSYSWVVRSIQERRLLNVHEFEVKGDVVTGRNH---QGPRRS 1695
Query: 589 RLRALNKAPKLFDGLSFYFSGNFMLGYKEDLQSLVITAGGTIWK 632
R KLF GL Y F K++L+ ++ G ++ K
Sbjct: 1696 R----ESREKLFKGLQVYCCEPFTNMPKDELERMLQLCGASVVK 1735
Score = 134 (52.2 bits), Expect = 1.4e-13, Sum P(4) = 1.4e-13
Identities = 37/125 (29%), Positives = 59/125 (47%)
Query: 30 VLH-LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTY 85
VLH +QK+ L+CP+CL L P+ CDHIFC C+ + + S+CPLCK++ T
Sbjct: 14 VLHAMQKI---LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITK 70
Query: 86 ADL----RPLAFLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQ 141
L R E ++ I + L +F + + +NS + A+ +
Sbjct: 71 RSLQGSTRFSQLAEELLRIMAAFELDTGMQLTNGF--SFSK-KRNNSCERLNEEASIIQS 127
Query: 142 VSFNN 146
V + N
Sbjct: 128 VGYRN 132
Score = 45 (20.9 bits), Expect = 1.4e-13, Sum P(4) = 1.4e-13
Identities = 18/70 (25%), Positives = 29/70 (41%)
Query: 177 QPSSHTQAGGIRDCRPAQIDINQLDQLSPCSPPSFGDIKGSDNESNDQGGELSPESYLAN 236
+P+ H + D P + +N+ L+ CS P +G N S + G E+ +
Sbjct: 675 EPNEHIRKRRASDAFPEEKLMNKAGLLTSCSSPRKS--QGPVNPSPQRTGTEQLETRQMS 732
Query: 237 RSVKRGFDDR 246
S K DR
Sbjct: 733 DSAKE-LGDR 741
Score = 45 (20.9 bits), Expect = 1.4e-13, Sum P(4) = 1.4e-13
Identities = 30/124 (24%), Positives = 50/124 (40%)
Query: 366 HVHSKCIEWAPQVYYAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPC 425
++ S C + + G T + ++ + R S K G +G+A GC +R+ P
Sbjct: 1424 NLKSACDDKFQLQHLEGPTSGDDESGMGRPSPFKSPLAGSRGSAHGCSRHLQKRNS--PS 1481
Query: 426 ALEI-----SECRWDTENFL-VLC-PVHSSVKFPIEKSGHRSIRNRAAPLQLTPQEPSFW 478
E+ SE + N C P P SG +R P +P+EP+
Sbjct: 1482 QEELLQPAGSEASSEPHNSTGQSCLPRRELEGTPYLGSGISLFSSRD-PESESPKEPAHI 1540
Query: 479 GSSP 482
G++P
Sbjct: 1541 GTTP 1544
Score = 40 (19.1 bits), Expect = 4.3e-13, Sum P(4) = 4.3e-13
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 275 PDSVGVKSSGHSQSTVFRSESLMASKSDSELKSVAALASEK 315
P+S K H +T + +L + +S AA ++K
Sbjct: 1529 PESESPKEPAHIGTTPASTSALKIPQGQVAFRSAAAAGADK 1569
>UNIPROTKB|E7EUM2 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 IPI:IPI00946315
ProteinModelPortal:E7EUM2 SMR:E7EUM2 Ensembl:ENST00000478531
UCSC:uc002idc.1 ArrayExpress:E7EUM2 Bgee:E7EUM2 Uniprot:E7EUM2
Length = 623
Score = 126 (49.4 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 34/120 (28%), Positives = 56/120 (46%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
+QK+ L+CP+CL L P+ CDHIFC C+ + + S+CPLCK+ T L+
Sbjct: 18 MQKI---LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 90 PLA-FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSFNNSA 148
F + + + K + A L+ S +E+NS + + + + N A
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRA 134
Score = 119 (46.9 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 473 QEPSFWGSSPNKAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAK 532
++P S+ K S L+ EE +L+ +F + ++ THV+ TDA+
Sbjct: 531 EKPELTASTERVNKRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAE 590
Query: 533 GSCTRTLKVLMAILNGNWVLKIDWI 557
C RTLK + I G WV+ W+
Sbjct: 591 FVCERTLKYFLGIAGGKWVVSYFWV 615
>UNIPROTKB|Q90X96 [details] [associations]
symbol:brca1 "Breast and ovarian cancer susceptibility
protein" species:8355 "Xenopus laevis" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006281
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 PANTHER:PTHR13763 CTD:672
KO:K10605 InterPro:IPR025994 Pfam:PF12820 HSSP:P38398 EMBL:AF416868
RefSeq:NP_001084248.1 UniGene:Xl.12105 ProteinModelPortal:Q90X96
SMR:Q90X96 IntAct:Q90X96 GeneID:399391 KEGG:xla:399391
Xenbase:XB-GENE-6254021 HOVERGEN:HBG073951 Uniprot:Q90X96
Length = 1579
Score = 139 (54.0 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 54/203 (26%), Positives = 81/203 (39%)
Query: 438 NFLVLCPVHSSVKFPIEKSGHRSI-RNRAAPLQLTPQE---PSFWGSSP--NKAKEWVFC 491
+F + S + P + I R +P +P PS SP + + F
Sbjct: 1318 SFCLSVEAAESPQIPKQNKAEFGIARKSTSPTFASPARAKVPSVGFKSPVVSSRRNLSFV 1377
Query: 492 GSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAKGSCTRTLKVLMAILNGNWV 551
S L+ E L+ RF +S + THVI TDA+ C RTLK I + WV
Sbjct: 1378 ASGLNQCEMALVQRFSKTTQSILSSRITDSTTHVIMKTDAELVCERTLKYFQGIASRKWV 1437
Query: 552 LKIDWIKACMEAMNPVGEEPYEINLD--NHGCEEGPKTGRLRALNKAPKLFDGLSFYFSG 609
+ +W+ + E +E+ D N GP+ RL + L D F G
Sbjct: 1438 VSYEWVVQSFREGQILDEYDFEVKGDVINGRNHRGPRRSRLGS--DGLLLID-FEICFFG 1494
Query: 610 NFMLGYKEDLQSLVITAGGTIWK 632
+F +DL+ +V G T+ K
Sbjct: 1495 SFTDMTLDDLEWMVSECGATVVK 1517
Score = 121 (47.7 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 56/249 (22%), Positives = 96/249 (38%)
Query: 40 LKCPLCLNLFSRPLLLPCDHIFCNSC----IPRSAQCESECPLCKSQCTYADL----RPL 91
L+CP+CL L P+ CDHIFC C + + + CPLCK++ T L R
Sbjct: 22 LECPICLELMKEPVATKCDHIFCKFCMLQLLSKKKKGTVPCPLCKTEVTRRSLQESHRFK 81
Query: 92 AFLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSFNNSACDG 151
+E + I K + Y F ++++ S + LV+ + C G
Sbjct: 82 LLVEGQLKIIKAFEFDSG-------YKFFP--SQEHTKGLDSTIEDVLVKEDQSIVHCKG 132
Query: 152 QKGKGFELTGMGENKRDGGQNPNSAQPSSHTQAGGIRDCRPAQIDINQLDQLSPCSPPSF 211
+ + + + G + + A+ + + CR + S C P S
Sbjct: 133 YRNRKKGVFNRKTYEETGMLSVSKAEEQFAKEVTRLIPCRQKKPKKEAALIFSNCVPDSS 192
Query: 212 -GDIKGSDNESNDQGGELSPESYLANRSVKRGFDDRTRQE-HRLSSSETAGSFRDSKRLK 269
GD+ N+ N + SP Y + ++ + +E+AGS L
Sbjct: 193 DGDLL---NKENGLRNDCSPLHYEKEDTQIPEMEEMVESDLAECEFAESAGS-----NLL 244
Query: 270 GFNYGPDSV 278
GF+ GP+ +
Sbjct: 245 GFD-GPEGI 252
Score = 40 (19.1 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 347 HYANGKPVVGEEAD 360
H ANG ++G+ D
Sbjct: 1207 HVANGSTLIGQSTD 1220
>UNIPROTKB|F1N8I5 [details] [associations]
symbol:BRCA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006281 "DNA repair" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR011364 PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089
SMART:SM00184 InterPro:IPR001357 Pfam:PF00097 Pfam:PF00533
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000794 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 PANTHER:PTHR13763
InterPro:IPR025994 Pfam:PF12820 GeneTree:ENSGT00440000034289
GO:GO:0009048 GO:GO:0007098 EMBL:AADN02068671 IPI:IPI00587753
Ensembl:ENSGALT00000004392 Ensembl:ENSGALT00000039722 OMA:INASHEN
Uniprot:F1N8I5
Length = 1749
Score = 127 (49.8 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 41/148 (27%), Positives = 59/148 (39%)
Query: 487 EWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAKGSCTRTLKVLMAIL 546
E S L+ E L++ +F S THVI TD + C RTLK + I
Sbjct: 1540 EMSIVASGLNQSEHLMVQKFARKTQSTFSNHITDGTTHVIMKTDEELVCERTLKYFLGIA 1599
Query: 547 NGNWVLKIDWIKACMEAMNPVGEEPYEINLD--NHGCEEGPKTGRLRALNKAPKLFDGLS 604
WV+ WI + + EE +E+ D N +GPK R + A K+F
Sbjct: 1600 GRKWVVSYQWIIQSFKEGRILDEEHFEVKGDVINGRNHQGPKRARQ---SPAEKIFKDFE 1656
Query: 605 FYFSGNFMLGYKEDLQSLVITAGGTIWK 632
G F L+ +V G ++ K
Sbjct: 1657 ICCCGPFTDMTTGHLEWIVELCGASVVK 1684
Score = 126 (49.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 40/141 (28%), Positives = 66/141 (46%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSC----IPRSAQCESECPLCKSQCTYADL 88
L + L+CP+CL++ P+ CDH+FC C + R + +CPLCK++ T L
Sbjct: 15 LSAMQKNLECPVCLDVIKEPVSTKCDHVFCRFCMFKLLSRKKKGVIQCPLCKTEVTKRSL 74
Query: 89 RPLAFLENIIAIYKGL-DASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSFNNS 147
+ + + +I +GL +A + L V R+ S+ + +A L NNS
Sbjct: 75 KENSRFKQLI---EGLLEAISAFELDTGVKFLSSRYFPKTST--EVATAELLG----NNS 125
Query: 148 ACDGQKGKGFELTGMGENKRD 168
+ KG G EN++D
Sbjct: 126 SVIQSKGFRNRKRGAKENRQD 146
>UNIPROTKB|A9JX13 [details] [associations]
symbol:TCF20 "Transcription factor 20" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 SMART:SM00249 GO:GO:0008270 EMBL:BX247885
EMBL:AL021878 EMBL:AL031346 UniGene:Hs.475018 HGNC:HGNC:11631
ChiTaRS:TCF20 EMBL:Z83851 IPI:IPI00879664 STRING:A9JX13
Ensembl:ENST00000404876 Ensembl:ENST00000574269 Uniprot:A9JX13
Length = 250
Score = 175 (66.7 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 34/87 (39%), Positives = 46/87 (52%)
Query: 362 SHVIHVHSKCIEWAPQVYYAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSY 421
S+ VH CI WA +Y + L+ L ++KCS C GA LGCY + C Y
Sbjct: 150 SNEFWVHEGCILWANGIYLVCGRLYGLQEALEIAREMKCSHCQEAGATLGCYNKGCSFRY 209
Query: 422 HVPCALEISECRWDTENFLVLCPVHSS 448
H PCA++ ++C ENF V CP H +
Sbjct: 210 HYPCAID-ADCLLHEENFSVRCPKHKN 235
>UNIPROTKB|E2RT08 [details] [associations]
symbol:TCF20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 SMART:SM00249 GO:GO:0008270
GeneTree:ENSGT00530000063684 CTD:6942 OMA:PNTVQHM EMBL:AAEX03007277
EMBL:AAEX03007278 EMBL:AAEX03007279 RefSeq:XP_857454.2
Ensembl:ENSCAFT00000001514 GeneID:481224 KEGG:cfa:481224
NextBio:20856073 Uniprot:E2RT08
Length = 1959
Score = 179 (68.1 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 36/93 (38%), Positives = 49/93 (52%)
Query: 362 SHVIHVHSKCIEWAPQVYYAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSY 421
S+ VH CI WA +Y + L+ L ++KCS C GA LGCY + C Y
Sbjct: 1848 SNEFWVHEGCILWANGIYLVCGRLYGLQEALEIAREMKCSHCQEAGATLGCYNKGCSFRY 1907
Query: 422 HVPCALEISECRWDTENFLVLCPVHSS-VKFPI 453
H PCA++ ++C ENF V CP H + FP+
Sbjct: 1908 HYPCAID-ADCLLHEENFSVRCPKHKPPLPFPL 1939
Score = 62 (26.9 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 42/177 (23%), Positives = 72/177 (40%)
Query: 152 QKGKGFELTGMGENKRDGGQNPNSAQPSSHTQAGGIRDCRPAQIDINQLDQLSPCSPPSF 211
+KG+G +L + + + N + S+ +AGG D + ++ + L PP
Sbjct: 1345 RKGRGLKLEAIVQ--KITSPNIRRSASSNSAEAGG--DT----VTLDDILSLKS-GPPEG 1395
Query: 212 GDIKGSDNESNDQGGELSPESYLANRSVKRGFDDRTRQEHRLSSSETAGSFRDSKRLKGF 271
G I D E + GEL + + S + + + SS E GS D ++K
Sbjct: 1396 GSIAVQDAEMEKRKGELVSD-LVCPTSQELNIEKPLPR----SSEEWRGSGDD--KVKTE 1448
Query: 272 NYGPDSV--GVKSSGHSQSTVFRSESLMASKSDSELKSVAALA---SEKMPPISIDS 323
+ PD+V G + G ST + + D L A L S+ +PP + +
Sbjct: 1449 TH-PDTVTAGKEPPGSMTSTTSQKPGSNQGRPDGSLGGTAPLIFSDSKNVPPAGVSA 1504
Score = 56 (24.8 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 24/91 (26%), Positives = 39/91 (42%)
Query: 101 YKGLDASPSSNLLQPV-YSAFGRHQED----NSSS---GQSLSANTLVQVSFNNSACDGQ 152
Y+ AS SS+ P +S G+ + N+ S G S+ +N + +N + Q
Sbjct: 233 YQSSAASSSSSFPSPQRFSQSGQSYDGSYSVNAGSQYEGHSVGSNAQAYGTQSNYSYQPQ 292
Query: 153 KGKGFELTGMGENKRDGGQNPN--SAQPSSH 181
K FE + + + G Q P + QP H
Sbjct: 293 SMKNFEQAKIPQGTQQGQQPPQQQAQQPQQH 323
Score = 44 (20.5 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 33/130 (25%), Positives = 46/130 (35%)
Query: 177 QPSSHTQAGGIRDCRPAQIDINQLDQL--SPCSPPSFGDIKGSDNESNDQGGELSPESYL 234
Q S+H G + + R DI+ L Q+ P S G I G+D + L+P L
Sbjct: 850 QSSAHEPGGSLSERRSVICDISPLRQIVRDP-GAHSLGHI-GTDTRLG-RSERLNPS--L 904
Query: 235 ANRSVKRGFDDRTRQEHRLSSSE---TAGSFRDSKRLKGFNYGPDSVGVKSSGHSQSTVF 291
+ + G E +L S F SK FN KS H
Sbjct: 905 SQSVILPG--GLVSMETKLKSQSGQIKEEDFEQSKSQASFN------NKKSGDHCHPASI 956
Query: 292 RSESLMASKS 301
+ ES + S
Sbjct: 957 KHESYRGNAS 966
>MGI|MGI:108399 [details] [associations]
symbol:Tcf20 "transcription factor 20" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001965
PROSITE:PS50016 SMART:SM00249 MGI:MGI:108399 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0044212
PROSITE:PS01359 eggNOG:NOG146768 HOGENOM:HOG000026801
HOVERGEN:HBG079232 OrthoDB:EOG40GCPZ ChiTaRS:TCF20 EMBL:AY007594
EMBL:U20282 IPI:IPI00228557 IPI:IPI00407458 UniGene:Mm.252156
ProteinModelPortal:Q9EPQ8 STRING:Q9EPQ8 PhosphoSite:Q9EPQ8
PaxDb:Q9EPQ8 PRIDE:Q9EPQ8 InParanoid:Q9EPQ8 CleanEx:MM_TCF20
Genevestigator:Q9EPQ8 GermOnline:ENSMUSG00000041852 Uniprot:Q9EPQ8
Length = 1983
Score = 176 (67.0 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 35/93 (37%), Positives = 48/93 (51%)
Query: 362 SHVIHVHSKCIEWAPQVYYAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSY 421
S+ VH CI WA +Y + L+ L ++KCS C GA LGCY + C Y
Sbjct: 1876 SNEFWVHEGCILWANGIYLVCGRLYGLQEALEIAREMKCSHCQEAGATLGCYNKGCSFRY 1935
Query: 422 HVPCALEISECRWDTENFLVLCPVHSSVKFPIE 454
H PCA++ ++C ENF V CP H P++
Sbjct: 1936 HYPCAID-ADCLLHEENFSVRCPKHKCPLPPLQ 1967
Score = 65 (27.9 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 24/78 (30%), Positives = 35/78 (44%)
Query: 108 PSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSFNNSACDGQ----KGKGFELTGMG 163
PSS Q FG+H + ++SS S S + + S + + DG G +E +G
Sbjct: 231 PSSAGYQLRVGQFGQHYQSSASSSSSSSFPSPQRFSQSGQSYDGSYSVNAGSQYEGHNVG 290
Query: 164 ENKRDGGQNPN-SAQPSS 180
N + G N S QP S
Sbjct: 291 SNAQAYGTQSNYSYQPQS 308
Score = 62 (26.9 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 27/103 (26%), Positives = 39/103 (37%)
Query: 163 GENKRDGGQNPNSAQPSSHTQAGGIRDCRPAQIDINQLDQLSPCSPPSFGDIKGSDNESN 222
G ++ GGQ+ S + + +I L Q P S G+ G +N SN
Sbjct: 644 GRVEKSGGQDKGSQEDDPAASQRPPSNSGVKEISHTSLPQPDPPGGGSKGNKNGDNNSSN 703
Query: 223 DQGGELSPESYLANRSVKRGFDDRTRQEHRLSSSETAGSFRDS 265
G P S+ A V F RT E S S+++S
Sbjct: 704 HNGEGNGPSSHSA---VGPSFTGRT--EPSKSPGSLRYSYKES 741
Score = 51 (23.0 bits), Expect = 5.9e-08, Sum P(3) = 5.9e-08
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 124 QEDNSSSGQSLSANTLV-QVSFNNSACDGQKGKGFELTGMGENKRDGGQNPNSAQPSSHT 182
QED+ ++ Q +N+ V ++S + G G + G+N N PSSH+
Sbjct: 657 QEDDPAASQRPPSNSGVKEISHTSLPQPDPPGGGSKGNKNGDNN-SSNHNGEGNGPSSHS 715
Query: 183 QAG 185
G
Sbjct: 716 AVG 718
Score = 38 (18.4 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 197 INQLDQLSPCSPPSF---GDIKGSDNESNDQGGELSPESYLANRS 238
I + ++L+P S G + + + QGG++ E + ++S
Sbjct: 923 IGRNERLNPSLSQSVILPGGLVSMETKLKSQGGQIKEEDFEQSKS 967
Score = 38 (18.4 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 16/64 (25%), Positives = 26/64 (40%)
Query: 254 SSSETAGSFRDSKRLKGFNYGPDSVGVKSSGHSQSTVFRSESLMASKSDSELKSVAALAS 313
S + + GS + ++LK G SS Q R S ++ SD+ K A+ +
Sbjct: 526 SCTNSEGSSQPEEQLKSPMAESLDGGCSSSSEDQGERVRQLSGQSTSSDTTYKCGASEKA 585
Query: 314 EKMP 317
P
Sbjct: 586 GSSP 589
Score = 37 (18.1 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 178 PSS-HTQAGGIRDCRPAQIDINQLDQL 203
PSS H G + + R DI+ L Q+
Sbjct: 879 PSSAHEPGGSLSERRSVICDISPLRQI 905
>UNIPROTKB|E7EMP0 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 InterPro:IPR025994
Pfam:PF12820 EMBL:AC060780 EMBL:AC135721 HGNC:HGNC:1100
ChiTaRS:BRCA1 IPI:IPI00930496 ProteinModelPortal:E7EMP0 SMR:E7EMP0
PRIDE:E7EMP0 Ensembl:ENST00000346315 ArrayExpress:E7EMP0
Bgee:E7EMP0 Uniprot:E7EMP0
Length = 1624
Score = 126 (49.4 bits), Expect = 1.2e-09, Sum P(4) = 1.2e-09
Identities = 34/120 (28%), Positives = 56/120 (46%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
+QK+ L+CP+CL L P+ CDHIFC C+ + + S+CPLCK+ T L+
Sbjct: 18 MQKI---LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 90 PLA-FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSFNNSA 148
F + + + K + A L+ S +E+NS + + + + N A
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRA 134
Score = 109 (43.4 bits), Expect = 1.2e-09, Sum P(4) = 1.2e-09
Identities = 30/105 (28%), Positives = 48/105 (45%)
Query: 530 DAKGSCTRTLKVLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLD--NHGCEEGPKT 587
DA+ C RTLK + I G WV+ W+ ++ + E +E+ D N +GPK
Sbjct: 1453 DAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKMLNEHDFEVRGDVVNGRNHQGPKR 1512
Query: 588 GRLRALNKAPKLFDGLSFYFSGNFMLGYKEDLQSLVITAGGTIWK 632
R ++ K+F GL G F + L+ +V G ++ K
Sbjct: 1513 ARE---SQDRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVK 1554
Score = 52 (23.4 bits), Expect = 1.2e-09, Sum P(4) = 1.2e-09
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 355 VGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLKAELAR--GSKLKCS-RCGL 405
V +EA S++ V S E + G + +N++AEL R G KL R G+
Sbjct: 1035 VFKEASSSNINEVGSSTNEVGSSINEIGSSDENIQAELGRNRGPKLNAMLRLGV 1088
Score = 39 (18.8 bits), Expect = 6.5e-09, Sum P(3) = 6.5e-09
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 383 DTVKNLKAELARGSKLKCS 401
DT LK A GS KCS
Sbjct: 695 DTFPELKLTNAPGSFTKCS 713
Score = 38 (18.4 bits), Expect = 1.2e-09, Sum P(4) = 1.2e-09
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 202 QLSPCSP-PSFGDIKGSDN--ESNDQGGELSPESYLANRSVKRGFDDRTRQEHRLSSSET 258
++ P P SF K N E N + +SPE + N ++ +R R + +
Sbjct: 979 RIPPLFPIKSFVKTKCKKNLLEENFEEHSMSPEREMGNENIPSTVSTISRNNIRENVFKE 1038
Query: 259 AGS 261
A S
Sbjct: 1039 ASS 1041
>UNIPROTKB|F8W0F5 [details] [associations]
symbol:G2E3 "G2/M phase-specific E3 ubiquitin-protein
ligase" species:9606 "Homo sapiens" [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] GO:GO:0043066 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004842 GO:GO:0000209 GO:GO:0001824
HGNC:HGNC:20338 EMBL:AL117355 IPI:IPI01021835
ProteinModelPortal:F8W0F5 Ensembl:ENST00000547532
ArrayExpress:F8W0F5 Bgee:F8W0F5 Uniprot:F8W0F5
Length = 176
Score = 148 (57.2 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 34/97 (35%), Positives = 50/97 (51%)
Query: 382 GDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWD-TENFL 440
G +++++ E+ R SKLKC C GA++GC C+RSYH PC L+ EC + T NF
Sbjct: 63 GFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQ-RECIFQFTGNFA 121
Query: 441 VLCPVHSSVKFPIEKSGHRSIRNRAAPLQLTPQEPSF 477
C H V+ I + +R L+ PS+
Sbjct: 122 SFCWDHRPVQI-ITSNNYRESLPCTICLEFIEPIPSY 157
>UNIPROTKB|G3V3B6 [details] [associations]
symbol:G2E3 "G2/M phase-specific E3 ubiquitin-protein
ligase" species:9606 "Homo sapiens" [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] GO:GO:0043066 GO:GO:0004842
GO:GO:0000209 GO:GO:0001824 HGNC:HGNC:20338 EMBL:AL117355
Ensembl:ENST00000554714 ArrayExpress:G3V3B6 Bgee:G3V3B6
Uniprot:G3V3B6
Length = 131
Score = 145 (56.1 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 29/70 (41%), Positives = 41/70 (58%)
Query: 382 GDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWD-TENFL 440
G +++++ E+ R SKLKC C GA++GC C+RSYH PC L+ EC + T NF
Sbjct: 63 GFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQ-RECIFQFTGNFA 121
Query: 441 VLCPVHSSVK 450
C H V+
Sbjct: 122 SFCWDHRPVQ 131
>FB|FBgn0003862 [details] [associations]
symbol:trx "trithorax" species:7227 "Drosophila melanogaster"
[GO:0008354 "germ cell migration" evidence=IMP;TAS] [GO:0005634
"nucleus" evidence=IDA;NAS] [GO:0003677 "DNA binding" evidence=NAS]
[GO:0048096 "chromatin-mediated maintenance of transcription"
evidence=NAS] [GO:0016571 "histone methylation" evidence=IDA;TAS]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IC;IMP;IDA]
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043966 "histone H3 acetylation"
evidence=IMP] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0008023 "transcription elongation factor complex" evidence=IPI]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0008157 "protein
phosphatase 1 binding" evidence=IPI] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:2001020 "regulation of
response to DNA damage stimulus" evidence=IGI] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IDA] [GO:0044665 "MLL1/2 complex"
evidence=IDA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001628 InterPro:IPR001965 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR015722 InterPro:IPR016569
InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964 Pfam:PF05965
PIRSF:PIRSF010354 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51030
PROSITE:PS51542 PROSITE:PS51543 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00541 SMART:SM00542 EMBL:AE014297
GO:GO:0007411 GO:GO:0005875 GO:GO:0042803 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0005700
eggNOG:COG2940 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GO:GO:0042800 GO:GO:0051568 GO:GO:0043966 GO:GO:0032968
GO:GO:0008023 GO:GO:0008354 KO:K09186 GeneTree:ENSGT00690000101661
PANTHER:PTHR22884:SF10 EMBL:M31617 EMBL:Z50152 EMBL:Z31725
EMBL:AY051904 PIR:A35085 RefSeq:NP_001014621.1 RefSeq:NP_476769.1
RefSeq:NP_476770.1 RefSeq:NP_599108.1 RefSeq:NP_599109.1
UniGene:Dm.6437 ProteinModelPortal:P20659 SMR:P20659 IntAct:P20659
MINT:MINT-907260 STRING:P20659 PaxDb:P20659
EnsemblMetazoa:FBtr0082947 EnsemblMetazoa:FBtr0082950 GeneID:41737
KEGG:dme:Dmel_CG8651 CTD:41737 FlyBase:FBgn0003862
InParanoid:P20659 OMA:RQPRLQF OrthoDB:EOG4X3FG4 PhylomeDB:P20659
GenomeRNAi:41737 NextBio:825306 Bgee:P20659 GermOnline:CG8651
GO:GO:0044665 Uniprot:P20659
Length = 3726
Score = 194 (73.4 bits), Expect = 4.9e-09, Sum P(4) = 4.9e-09
Identities = 41/116 (35%), Positives = 68/116 (58%)
Query: 350 NGKPVVGEEADRSHVIH---VHSKCIEWAPQVYYAGD-TVKNLKAELARGSKLKCSRCGL 405
+G+ + GEEA + H VH+ C W+ +V+ D +++N+ + +ARG +KC+ CG
Sbjct: 1743 SGEGLSGEEARLLYCGHDCWVHTNCAMWSAEVFEEIDGSLQNVHSAVARGRMIKCTVCGN 1802
Query: 406 KGAALGCYVRSCRRSYHVPCALEISECRWDTENFLVLCPVHSSVKFPIEKSGHRSI 461
+GA +GC VRSC YH PCA I +C + T+ + CP H+ ++ +G S+
Sbjct: 1803 RGATVGCNVRSCGEHYHYPCARSI-DCAFLTDKSMY-CPAHAKNGNALKANGSPSV 1856
Score = 60 (26.2 bits), Expect = 4.9e-09, Sum P(4) = 4.9e-09
Identities = 22/78 (28%), Positives = 32/78 (41%)
Query: 124 QEDNSSSGQSLSANTLVQVSFNNSACDGQKGKGFEL---TGMGENKRDGGQNPNSAQPSS 180
++DN+ G S+S NT ++SA G G G TG G + G N S +
Sbjct: 65 EDDNAPGGASISGNTA-----SSSAGSGNSGNGSSSGSSTGSGSSG-SGSTNGGSVNGGT 118
Query: 181 HTQAGGIRDCRPAQIDIN 198
H ++ D D N
Sbjct: 119 HHKSAANLDKEAVTKDQN 136
Score = 39 (18.8 bits), Expect = 4.9e-09, Sum P(4) = 4.9e-09
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 324 CANNYICGFCQSSRISEVTG 343
C N C C ++++S+ G
Sbjct: 1387 CVNCLKCKSCSTTKVSKFVG 1406
Score = 37 (18.1 bits), Expect = 4.9e-09, Sum P(4) = 4.9e-09
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 274 GPDSVGVKSSGHSQSTVFRSESL 296
G +S KSSG +Q+ V ++ +L
Sbjct: 1147 GDESKPSKSSGSAQAEVKKATAL 1169
>UNIPROTKB|Q9UGU0 [details] [associations]
symbol:TCF20 "Transcription factor 20" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] InterPro:IPR001965 PROSITE:PS50016 SMART:SM00249
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
EMBL:CH471095 GO:GO:0008270 GO:GO:0006351 GO:GO:0003713
PROSITE:PS01359 EMBL:BX247885 eggNOG:NOG146768 EMBL:AY007595
EMBL:AL031346 EMBL:AB006630 EMBL:U19345 IPI:IPI00159322
IPI:IPI00220381 RefSeq:NP_005641.1 RefSeq:NP_852469.1
UniGene:Hs.475018 ProteinModelPortal:Q9UGU0 IntAct:Q9UGU0
STRING:Q9UGU0 PhosphoSite:Q9UGU0 DMDM:92090378 PaxDb:Q9UGU0
PRIDE:Q9UGU0 Ensembl:ENST00000335626 Ensembl:ENST00000359486
GeneID:6942 KEGG:hsa:6942 UCSC:uc003bcj.1 UCSC:uc003bck.1 CTD:6942
GeneCards:GC22M042556 H-InvDB:HIX0016540 HGNC:HGNC:11631
HPA:CAB017849 MIM:603107 neXtProt:NX_Q9UGU0 PharmGKB:PA36386
HOGENOM:HOG000026801 HOVERGEN:HBG079232 InParanoid:Q9UGU0
OMA:PNTVQHM OrthoDB:EOG40GCPZ PhylomeDB:Q9UGU0 ChiTaRS:TCF20
GenomeRNAi:6942 NextBio:27171 PMAP-CutDB:Q9UGU0 ArrayExpress:Q9UGU0
Bgee:Q9UGU0 CleanEx:HS_TCF20 Genevestigator:Q9UGU0
GermOnline:ENSG00000100207 Uniprot:Q9UGU0
Length = 1960
Score = 174 (66.3 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 34/85 (40%), Positives = 45/85 (52%)
Query: 362 SHVIHVHSKCIEWAPQVYYAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSY 421
S+ VH CI WA +Y + L+ L ++KCS C GA LGCY + C Y
Sbjct: 1849 SNEFWVHEGCILWANGIYLVCGRLYGLQEALEIAREMKCSHCQEAGATLGCYNKGCSFRY 1908
Query: 422 HVPCALEISECRWDTENFLVLCPVH 446
H PCA++ ++C ENF V CP H
Sbjct: 1909 HYPCAID-ADCLLHEENFSVRCPKH 1932
Score = 60 (26.2 bits), Expect = 7.3e-09, Sum P(3) = 7.3e-09
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 120 FGRHQEDNSSSGQSLSANTLVQVSFNNSACDGQ----KGKGFELTGMGENKRDGGQNPN- 174
FG+H + ++SS S S + + S + + DG G +E +G N + G N
Sbjct: 231 FGQHYQSSASSSSSSSFPSPQRFSQSGQSYDGSYNVNAGSQYEGHNVGSNAQAYGTQSNY 290
Query: 175 SAQPSS 180
S QP S
Sbjct: 291 SYQPQS 296
Score = 54 (24.1 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 32/111 (28%), Positives = 47/111 (42%)
Query: 163 GENKRDGGQNPNSAQPS-SHTQA----GGIRDCRPAQIDINQLDQLSPCSPPSFGDIKGS 217
G ++ GGQ+ S + + TQ GG ++ A + P PP G KG+
Sbjct: 615 GRVEKPGGQDKGSQEDDPAATQRPPSNGGAKETSHASLP-------QP-EPPGGGGSKGN 666
Query: 218 ---DNESNDQGGELSPESYLANRSVKRGFDDRTRQEHRLSSSETAGSFRDS 265
DN SN GE + +S + + GF RT E S S++DS
Sbjct: 667 KNGDNNSN-HNGEGNGQS--GHSAAGPGFTSRT--EPSKSPGSLRYSYKDS 712
Score = 49 (22.3 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 19/76 (25%), Positives = 30/76 (39%)
Query: 131 GQSLSANTLVQVSFNNSACDGQKGKGFELTGMGENKRDGGQN--PNSAQ-PSSHT-QAGG 186
G ++ +N + +N + Q K FE + + + G Q P Q PS H Q
Sbjct: 274 GHNVGSNAQAYGTQSNYSYQPQSMKNFEQAKIPQGTQQGQQQQQPQQQQHPSQHVMQYTN 333
Query: 187 IRDCRPAQIDINQLDQ 202
P Q + Q +Q
Sbjct: 334 AATKLPLQSQVGQYNQ 349
Score = 40 (19.1 bits), Expect = 7.3e-09, Sum P(3) = 7.3e-09
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 177 QPSSHTQAGGIRDCRPAQIDINQLDQL 203
Q S+H G + + R DI+ L Q+
Sbjct: 850 QSSAHEPGGSLSERRSVICDISPLRQI 876
Score = 39 (18.8 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 16/64 (25%), Positives = 26/64 (40%)
Query: 254 SSSETAGSFRDSKRLKGFNYGPDSVGVKSSGHSQSTVFRSESLMASKSDSELKSVAALAS 313
S + + GS + ++LK G SS Q R S ++ SD+ K A+ +
Sbjct: 497 SCTNSEGSSQPEEQLKSPMAESLDGGCSSSSEDQGERVRQLSGQSTSSDTTYKGGASEKA 556
Query: 314 EKMP 317
P
Sbjct: 557 GSSP 560
>UNIPROTKB|E1B8T3 [details] [associations]
symbol:TCF20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 SMART:SM00249 GO:GO:0008270
GeneTree:ENSGT00530000063684 OMA:PNTVQHM EMBL:DAAA02014758
EMBL:DAAA02014759 IPI:IPI00692768 UniGene:Bt.44586
Ensembl:ENSBTAT00000000872 NextBio:20873675 Uniprot:E1B8T3
Length = 1968
Score = 174 (66.3 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 34/85 (40%), Positives = 45/85 (52%)
Query: 362 SHVIHVHSKCIEWAPQVYYAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSY 421
S+ VH CI WA +Y + L+ L ++KCS C GA LGCY + C Y
Sbjct: 1857 SNEFWVHEGCILWANGIYLVCGRLYGLQEALEIAREMKCSHCQEAGATLGCYNKGCSFRY 1916
Query: 422 HVPCALEISECRWDTENFLVLCPVH 446
H PCA++ ++C ENF V CP H
Sbjct: 1917 HYPCAID-ADCLLHEENFSVRCPKH 1940
Score = 54 (24.1 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 34/166 (20%), Positives = 61/166 (36%)
Query: 141 QVSFNNSACDGQKGKGFELTGMGENKRDGGQNPNSAQPSSHTQAGGIRDCRPAQID---- 196
Q SFNN + G + G +P +A S + G +D RP +
Sbjct: 947 QASFNNK----KSGDHCHPASIKHESYRGNASPGAATHDSISDYGP-QDSRPTPMRRVPG 1001
Query: 197 -INQLDQLSPCSPPSFGD----IKGSDNESNDQGGE---LSPESYLANRSVKRGFDDRTR 248
+ + + SP + D +K S S GG+ +SP + R+ +
Sbjct: 1002 RVGSREGMRGRSPSQYHDFSEKLKMSPGRSRGPGGDPHHMSPHMTFSERANRSSL----H 1057
Query: 249 QEHRLSSSETAGSFRDSKRLKGFNYGPDSVGVKSSGHSQSTVFRSE 294
+S A ++ + R YG S G+ S H + +++ +
Sbjct: 1058 APFSPNSESLASAYHTNTRAHA--YGDPSAGLNSQLHYKRQMYQQQ 1101
Score = 52 (23.4 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 43/171 (25%), Positives = 67/171 (39%)
Query: 171 QNPN-SAQPSSHTQAGGIRDCRPAQIDI---NQLDQLSP-CSP-PSFGDIKGSDNES-ND 223
Q+P+ S+ PS TQ+G C + + N++ QL P SP PS S
Sbjct: 386 QSPSCSSTPSPLTQSGENLQCGQGNVPMGSRNRILQLMPQLSPTPSMMPSPNSHTAGFKG 445
Query: 224 QGGELSPESYLANRSVKR--GFDDRTRQ-----EHRLSSSETAGSFRDSKRLKGFNYGPD 276
G E PE L + + + +H L S + SKR + D
Sbjct: 446 FGLEGVPEKRLTDPGLSSLSALSTQVANLPNTVQHMLLSDALTPQKKTSKRPSSSSKKTD 505
Query: 277 SVGVKSSGHSQSTVFRSESLMASKSDSELKSVAALASEKMPPISIDSCANN 327
S S G SQ+ + +S MA D S + E++ +S S +++
Sbjct: 506 SCP-NSEGSSQAEE-QLKSPMAESLDGGCSSSSEDQGERVRQLSGQSTSSD 554
Score = 38 (18.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 33/130 (25%), Positives = 46/130 (35%)
Query: 178 PSS-HTQAGGIRDCRPAQIDINQLDQL--SPCSPPSFGDIKGSDNESNDQGGELSPESYL 234
PSS H G + + R DI+ L Q+ P S G + G+D + L+P L
Sbjct: 858 PSSAHEPGGSLSERRSVICDISPLRQIVRDP-GAHSLGHM-GADTRLG-RNERLNPS--L 912
Query: 235 ANRSVKRGFDDRTRQEHRLSSSE---TAGSFRDSKRLKGFNYGPDSVGVKSSGHSQSTVF 291
+ + G E +L S F SK FN KS H
Sbjct: 913 SQSVILPG--GLVSMETKLKSQSGQIKEEDFEQSKSQASFN------NKKSGDHCHPASI 964
Query: 292 RSESLMASKS 301
+ ES + S
Sbjct: 965 KHESYRGNAS 974
>UNIPROTKB|D4A0Y0 [details] [associations]
symbol:D4A0Y0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104499 EMBL:AC113720
IPI:IPI00359118 Ensembl:ENSRNOT00000030827 Uniprot:D4A0Y0
Length = 151
Score = 140 (54.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 27/82 (32%), Positives = 43/82 (52%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIP------RSAQCESECPLCKSQCTYA 86
L+ + E+ CP+CL L P+ C+H FC +CI R+ + E CP+C+ +
Sbjct: 6 LEMIKEEVTCPICLELLKEPVSTDCNHSFCRACITINYESNRNTEGEGSCPVCRVCYLFR 65
Query: 87 DLRPLAFLENIIAIYKGLDASP 108
+LRP + NI+ KG + P
Sbjct: 66 NLRPNRHVANIVERLKGFKSIP 87
>UNIPROTKB|K7EPC7 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR011364 InterPro:IPR001357 Pfam:PF00533 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 PANTHER:PTHR13763 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 Ensembl:ENST00000591534 Uniprot:K7EPC7
Length = 354
Score = 159 (61.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 43/162 (26%), Positives = 72/162 (44%)
Query: 473 QEPSFWGSSPNKAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAK 532
++P S+ K S L+ EE +L+ +F + ++ THV+ TDA+
Sbjct: 126 EKPELTASTERVNKRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAE 185
Query: 533 GSCTRTLKVLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLD--NHGCEEGPKTGRL 590
C RTLK + I G WV+ W+ ++ + E +E+ D N +GPK R
Sbjct: 186 FVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKMLNEHDFEVRGDVVNGRNHQGPKRARE 245
Query: 591 RALNKAPKLFDGLSFYFSGNFMLGYKEDLQSLVITAGGTIWK 632
++ K+F GL G F + L+ +V G ++ K
Sbjct: 246 ---SQDRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVK 284
>UNIPROTKB|Q5JRC6 [details] [associations]
symbol:PHF6 "PHD finger protein 6, isoform CRA_d"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001965 SMART:SM00249
GO:GO:0005730 GO:GO:0008270 EMBL:CH471107 EMBL:AC004383
HOGENOM:HOG000026798 HOVERGEN:HBG049389 EMBL:AL591668
UniGene:Hs.356501 HGNC:HGNC:18145 ChiTaRS:PHF6 IPI:IPI00552149
SMR:Q5JRC6 STRING:Q5JRC6 Ensembl:ENST00000370799 UCSC:uc004exi.3
Uniprot:Q5JRC6
Length = 324
Score = 157 (60.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 50/163 (30%), Positives = 78/163 (47%)
Query: 330 CGFCQSSRISEVTGLMLHYANGKPVVGEEAD--RSHVIHVHSKCIEWAPQVYYAGDTVKN 387
CGFC+S+R E G +L N K + S ++ HS G ++++
Sbjct: 17 CGFCKSNRDKEC-GQLLISENQKVAAHHKCMLFSSALVSSHSD------NESLGGFSIED 69
Query: 388 LKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCAL-EISECRWDTEN--FLVLCP 444
++ E+ RG+KL CS C GA +GC V++C R+YH CAL + ++ R ++V C
Sbjct: 70 VQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCR 129
Query: 445 VHSSVKFPIEKSGHRSIRNRAAPLQLTPQEPSFWGSSPNKAKE 487
H +K+ H S AA L+ + E SSP K+
Sbjct: 130 KH-------KKTAHNS---EAADLEESFNEHELEPSSPKSKKK 162
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 36/157 (22%), Positives = 66/157 (42%)
Query: 275 PDSVGVKSSGHSQSTVFR--SESLMASKSDSELKSVAALASEKMPPISIDSCANNYICGF 332
P S G + T F+ SE ++ S + ++ ++ P S S CGF
Sbjct: 157 PKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPK-CGF 215
Query: 333 CQ-SSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLKAE 391
C +E G LH N K + + + + + + +K + E
Sbjct: 216 CHVGEEENEARG-KLHIFNAKKAAAHY--KCMLFSSGTVQLTTTSRAEFGDFDIKTVLQE 272
Query: 392 LARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALE 428
+ RG ++KC+ C GA +GC +++C ++YH C ++
Sbjct: 273 IKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQ 309
>MGI|MGI:2444298 [details] [associations]
symbol:G2e3 "G2/M-phase specific E3 ubiquitin ligase"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0001824 "blastocyst
development" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR001841 InterPro:IPR000569
InterPro:IPR001965 PROSITE:PS50016 PROSITE:PS50237 SMART:SM00184
SMART:SM00249 UniPathway:UPA00143 MGI:MGI:2444298 GO:GO:0005737
GO:GO:0006915 GO:GO:0043066 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004842 GO:GO:0000209 GO:GO:0001824
HSSP:Q9DAG9 CTD:55632 eggNOG:NOG304942 HOGENOM:HOG000112684
HOVERGEN:HBG055656 OrthoDB:EOG4R23T7 SUPFAM:SSF56204 EMBL:AK129332
EMBL:AC161116 EMBL:BC086455 EMBL:AK084256 IPI:IPI00556716
RefSeq:NP_001015099.2 RefSeq:NP_001161435.1 RefSeq:NP_001161436.1
UniGene:Mm.253264 ProteinModelPortal:Q5RJY2 SMR:Q5RJY2
PhosphoSite:Q5RJY2 PRIDE:Q5RJY2 Ensembl:ENSMUST00000054308
GeneID:217558 KEGG:mmu:217558 UCSC:uc007nml.2
GeneTree:ENSGT00390000005246 ChiTaRS:G2E3 NextBio:375887
Bgee:Q5RJY2 CleanEx:MM_6030408C04RIK Genevestigator:Q5RJY2
GermOnline:ENSMUSG00000035293 Uniprot:Q5RJY2
Length = 716
Score = 162 (62.1 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 30/70 (42%), Positives = 46/70 (65%)
Query: 382 GDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWD-TENFL 440
G +++++ E+ R SKLKC+ C GA++GC V +C+RSYH+PC L+ EC + T+NF
Sbjct: 63 GFLIEDIRKEVQRASKLKCTVCKKNGASIGCVVPTCKRSYHLPCGLQ-KECIFQFTDNFA 121
Query: 441 VLCPVHSSVK 450
C H V+
Sbjct: 122 SFCWKHRPVQ 131
>UNIPROTKB|E9PC97 [details] [associations]
symbol:PHF6 "PHD finger protein 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001965 SMART:SM00249 GO:GO:0005730 GO:GO:0008270
EMBL:AC004383 EMBL:AL591668 HGNC:HGNC:18145 ChiTaRS:PHF6
IPI:IPI00552149 ProteinModelPortal:E9PC97 SMR:E9PC97
Ensembl:ENST00000394292 OMA:MARGIYK ArrayExpress:E9PC97 Bgee:E9PC97
Uniprot:E9PC97
Length = 366
Score = 157 (60.3 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 50/163 (30%), Positives = 78/163 (47%)
Query: 330 CGFCQSSRISEVTGLMLHYANGKPVVGEEAD--RSHVIHVHSKCIEWAPQVYYAGDTVKN 387
CGFC+S+R E G +L N K + S ++ HS G ++++
Sbjct: 17 CGFCKSNRDKEC-GQLLISENQKVAAHHKCMLFSSALVSSHSD------NESLGGFSIED 69
Query: 388 LKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCAL-EISECRWDTEN--FLVLCP 444
++ E+ RG+KL CS C GA +GC V++C R+YH CAL + ++ R ++V C
Sbjct: 70 VQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCR 129
Query: 445 VHSSVKFPIEKSGHRSIRNRAAPLQLTPQEPSFWGSSPNKAKE 487
H +K+ H S AA L+ + E SSP K+
Sbjct: 130 KH-------KKTAHNS---EAADLEESFNEHELEPSSPKSKKK 162
Score = 127 (49.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 48/212 (22%), Positives = 87/212 (41%)
Query: 275 PDSVGVKSSGHSQSTVFR--SESLMASKSDSELKSVAALASEKMPPISIDSCANNYICGF 332
P S G + T F+ SE ++ S + ++ ++ P S S CGF
Sbjct: 157 PKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPK-CGF 215
Query: 333 CQ-SSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLKAE 391
C +E G LH N K + + + + + + +K + E
Sbjct: 216 CHVGEEENEARG-KLHIFNAKKAAAHY--KCMLFSSGTVQLTTTSRAEFGDFDIKTVLQE 272
Query: 392 LARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWDTEN-----FLVLCPVH 446
+ RG ++KC+ C GA +GC +++C ++YH C ++ + ++ EN + + C H
Sbjct: 273 IKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQ-DKAKY-IENMSRGIYKLYCKNH 330
Query: 447 SSVKFPIEKSGHRSIRNRAA----PLQLTPQE 474
S E+ R ++R QLT Q+
Sbjct: 331 SGNDERDEEDEERESKSRGKVEIDQQQLTQQQ 362
>UNIPROTKB|A2AAZ5 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOVERGEN:HBG001357 HOGENOM:HOG000234134
EMBL:AL662832 EMBL:AL662795 EMBL:AL773535 EMBL:BX294158
EMBL:CR759928 EMBL:BX927214 EMBL:CR759281 EMBL:BX248580
HGNC:HGNC:10065 IPI:IPI00796458 SMR:A2AAZ5 Ensembl:ENST00000411711
Ensembl:ENST00000416213 Ensembl:ENST00000424571
Ensembl:ENST00000430414 Ensembl:ENST00000453856
Ensembl:ENST00000456425 Ensembl:ENST00000458516 Uniprot:A2AAZ5
Length = 144
Score = 135 (52.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
L+ L +E C +CL P+++ C H FC +CI R + + CP+C+ Y LR
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLR 79
Query: 90 PLAFLENIIAIYKGLDA 106
P L +++ I K L A
Sbjct: 80 PNRQLGSMVEIAKQLQA 96
>UNIPROTKB|F8VY49 [details] [associations]
symbol:G2E3 "G2/M phase-specific E3 ubiquitin-protein
ligase" species:9606 "Homo sapiens" [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] GO:GO:0043066 GO:GO:0004842
GO:GO:0000209 GO:GO:0001824 HGNC:HGNC:20338 EMBL:AL117355
IPI:IPI01022079 Ensembl:ENST00000550944 ArrayExpress:F8VY49
Bgee:F8VY49 Uniprot:F8VY49
Length = 121
Score = 135 (52.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 382 GDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWD-TENF 439
G +++++ E+ R SKLKC C GA++GC C+RSYH PC L+ EC + T NF
Sbjct: 63 GFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQ-RECIFQFTGNF 120
>UNIPROTKB|B4DES0 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR011364 PIRSF:PIRSF001734 InterPro:IPR001357
Pfam:PF00533 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
PANTHER:PTHR13763 EMBL:AC060780 EMBL:AC135721 IPI:IPI00027277
UniGene:Hs.194143 HGNC:HGNC:1100 ChiTaRS:BRCA1 EMBL:AK293762
ProteinModelPortal:B4DES0 SMR:B4DES0 STRING:B4DES0
Ensembl:ENST00000393691 UCSC:uc010whp.2 HOGENOM:HOG000142477
HOVERGEN:HBG061757 ArrayExpress:B4DES0 Bgee:B4DES0 Uniprot:B4DES0
Length = 712
Score = 159 (61.0 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 43/162 (26%), Positives = 72/162 (44%)
Query: 473 QEPSFWGSSPNKAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAK 532
++P S+ K S L+ EE +L+ +F + ++ THV+ TDA+
Sbjct: 484 EKPELTASTERVNKRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAE 543
Query: 533 GSCTRTLKVLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLD--NHGCEEGPKTGRL 590
C RTLK + I G WV+ W+ ++ + E +E+ D N +GPK R
Sbjct: 544 FVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKMLNEHDFEVRGDVVNGRNHQGPKRARE 603
Query: 591 RALNKAPKLFDGLSFYFSGNFMLGYKEDLQSLVITAGGTIWK 632
++ K+F GL G F + L+ +V G ++ K
Sbjct: 604 ---SQDRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVK 642
Score = 49 (22.3 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 18/76 (23%), Positives = 32/76 (42%)
Query: 74 SECPLCKSQCTYADLRPLA-FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQ 132
S+CPLCK+ T L+ F + + + K + A L+ S +E+NS
Sbjct: 12 SQCPLCKNDITKRSLQESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHL 71
Query: 133 SLSANTLVQVSFNNSA 148
+ + + + N A
Sbjct: 72 KDEVSIIQSMGYRNRA 87
>RGD|1310263 [details] [associations]
symbol:G2e3 "G2/M-phase specific E3 ubiquitin protein ligase"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0001824 "blastocyst
development" evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA;ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
Pfam:PF00632 InterPro:IPR001841 InterPro:IPR000569
InterPro:IPR001965 PROSITE:PS50237 SMART:SM00184 SMART:SM00249
RGD:1310263 GO:GO:0005794 GO:GO:0043066 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004842
GO:GO:0000209 GO:GO:0001824 EMBL:CH473947 CTD:55632
OrthoDB:EOG4R23T7 SUPFAM:SSF56204 GeneTree:ENSGT00390000005246
OMA:WEQNWEC IPI:IPI00367095 RefSeq:NP_001100196.1 UniGene:Rn.126080
Ensembl:ENSRNOT00000005670 GeneID:299002 KEGG:rno:299002
UCSC:RGD:1310263 NextBio:644637 Uniprot:D3ZC11
Length = 717
Score = 160 (61.4 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 382 GDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWD-TENFL 440
G +++++ E+ R SKLKC+ C GA++GC V C+RSYH+PC L+ EC + T+NF
Sbjct: 63 GFLIEDIRKEVNRASKLKCTVCKKNGASIGCVVPQCKRSYHLPCGLQ-KECIFQFTDNFA 121
Query: 441 VLCPVHSSVK 450
C H V+
Sbjct: 122 SFCWKHRPVQ 131
>UNIPROTKB|C9J060 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC131574
HOGENOM:HOG000234134 HGNC:HGNC:16379 ChiTaRS:TRIM22 EMBL:AC109341
IPI:IPI00239700 ProteinModelPortal:C9J060 SMR:C9J060 STRING:C9J060
PRIDE:C9J060 Ensembl:ENST00000425490 ArrayExpress:C9J060
Bgee:C9J060 Uniprot:C9J060
Length = 203
Score = 143 (55.4 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 31/91 (34%), Positives = 46/91 (50%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRS-------AQCESECPLCKSQCTYADLRPL 91
E+ CP+CL L + PL L C H FC +CI ++ ES CP+C+++ +LRP
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGNLRPN 71
Query: 92 AFLENIIAIYKGLDASPSSNLLQPVYSAFGR 122
L NI+ K + SP + V G+
Sbjct: 72 RHLANIVERVKEVKMSPQEGQKRDVCEHHGK 102
>UNIPROTKB|J9NTC9 [details] [associations]
symbol:PHF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 SMART:SM00249 GO:GO:0008270
GeneTree:ENSGT00530000063780 OMA:MARGIYK EMBL:AAEX03026926
Ensembl:ENSCAFT00000050033 Uniprot:J9NTC9
Length = 366
Score = 154 (59.3 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 49/163 (30%), Positives = 78/163 (47%)
Query: 330 CGFCQSSRISEVTGLMLHYANGKPVVGEEAD--RSHVIHVHSKCIEWAPQVYYAGDTVKN 387
CGFC+S+R E G +L N K + S ++ HS G ++++
Sbjct: 17 CGFCKSNRDKEC-GQLLISENQKVAAHHKCMLFSSALVSSHSD------NESLGGFSIED 69
Query: 388 LKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCAL-EISECRWDTEN--FLVLCP 444
++ E+ RG+KL CS C GA +GC V++C R+YH CAL + ++ R ++V C
Sbjct: 70 VQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCR 129
Query: 445 VHSSVKFPIEKSGHRSIRNRAAPLQLTPQEPSFWGSSPNKAKE 487
H +K+ H S AA L+ + E +SP K+
Sbjct: 130 KH-------KKTAHNS---EAADLEESFNEHELEPASPKSKKK 162
Score = 127 (49.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 48/212 (22%), Positives = 87/212 (41%)
Query: 275 PDSVGVKSSGHSQSTVFR--SESLMASKSDSELKSVAALASEKMPPISIDSCANNYICGF 332
P S G + T F+ SE ++ S + ++ ++ P S S CGF
Sbjct: 157 PKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPK-CGF 215
Query: 333 CQ-SSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLKAE 391
C +E G LH N K + + + + + + +K + E
Sbjct: 216 CHVGEEENEARG-KLHIFNAKKAAAHY--KCMLFSSGTVQLTTTSRAEFGDFDIKTVLQE 272
Query: 392 LARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWDTEN-----FLVLCPVH 446
+ RG ++KC+ C GA +GC +++C ++YH C ++ + ++ EN + + C H
Sbjct: 273 IKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQ-DKAKY-IENMSRGIYKLYCKNH 330
Query: 447 SSVKFPIEKSGHRSIRNRAA----PLQLTPQE 474
S E+ R ++R QLT Q+
Sbjct: 331 SGNDERDEEDEERESKSRGKVEIDQQQLTQQQ 362
>UNIPROTKB|E1BXI6 [details] [associations]
symbol:Gga.5057 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 SMART:SM00249 GO:GO:0008270
GeneTree:ENSGT00530000063684 OMA:PNTVQHM EMBL:AADN02006050
IPI:IPI00594422 Ensembl:ENSGALT00000019383 Uniprot:E1BXI6
Length = 1941
Score = 174 (66.3 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 37/113 (32%), Positives = 57/113 (50%)
Query: 362 SHVIHVHSKCIEWAPQVYYAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSY 421
S+ VH CI WA +Y + L+ + ++KCS C GA LGCY + C Y
Sbjct: 1830 SNEFWVHEGCILWANGIYLVCGRLYGLQEAVEIAREMKCSHCQEPGATLGCYNKGCSFRY 1889
Query: 422 HVPCALEISECRWDTENFLVLCPVHSSVKFPIEKSGHRSIRNRAAPLQLTPQE 474
H PCA++ ++C + ENF V CP H P+ S++N+ L+ ++
Sbjct: 1890 HYPCAID-ADCLLNEENFSVRCPKHK----PLLPCSLPSLQNKMVKGSLSTEQ 1937
Score = 45 (20.9 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 17/74 (22%), Positives = 31/74 (41%)
Query: 116 VYSAFGRHQEDNSSSGQSLSANTLVQVSFNNSACDGQKGKGFELTGMGENK---RDGGQN 172
++ +FG + G + ++ + S + + G + + E M NK GGQ
Sbjct: 38 MFQSFGGGT-GSGRRGAAGASTAMPGESSGHQSYQGFRKEAGEFYYMATNKDPVASGGQQ 96
Query: 173 PNSAQPSSHTQAGG 186
P +PS Q+ G
Sbjct: 97 PPQRRPSGPVQSYG 110
Score = 42 (19.8 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 176 AQPSSHTQAGGIRDCRPAQIDINQLDQL--SPCSPPSFGDIKGSDNESNDQGGELSP 230
+Q SSH + G + + R DI+ L QL P P G + G + S + L+P
Sbjct: 828 SQSSSH-EGGALSERRSVICDISPLRQLVRDP-GPHPMGHM-GPEGRSG-RSERLAP 880
Score = 38 (18.4 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 14/67 (20%), Positives = 25/67 (37%)
Query: 124 QEDNSSSGQSLSANTLVQVSFNNSACDGQK---GKGFELTGMGENKRDGGQN-PNSAQPS 179
++ +SL+A+ + + C G +G GG+ P ++PS
Sbjct: 1750 EQQQQKEQRSLAAHPRFKRRHRSEDCSGASRSLSRGASCKKATTEGGSGGEKTPLDSKPS 1809
Query: 180 SHTQAGG 186
T GG
Sbjct: 1810 MPTSEGG 1816
>UNIPROTKB|Q8IWS0 [details] [associations]
symbol:PHF6 "PHD finger protein 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR001965 PROSITE:PS50016 SMART:SM00249
GO:GO:0005730 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 PROSITE:PS01359 EMBL:CH471107 EMBL:AC004383 CTD:84295
eggNOG:NOG282606 HOGENOM:HOG000026798 HOVERGEN:HBG049389
OrthoDB:EOG4K9BCK EMBL:AY157622 EMBL:AB058726 EMBL:AL591668
EMBL:BC005994 IPI:IPI00395568 IPI:IPI00397700 RefSeq:NP_001015877.1
RefSeq:NP_115711.2 RefSeq:NP_115834.1 UniGene:Hs.356501
ProteinModelPortal:Q8IWS0 IntAct:Q8IWS0 STRING:Q8IWS0
PhosphoSite:Q8IWS0 DMDM:42559482 PaxDb:Q8IWS0 PeptideAtlas:Q8IWS0
PRIDE:Q8IWS0 DNASU:84295 Ensembl:ENST00000332070
Ensembl:ENST00000370800 Ensembl:ENST00000370803 GeneID:84295
KEGG:hsa:84295 UCSC:uc004exh.3 UCSC:uc004exj.3
GeneCards:GC0XP133507 HGNC:HGNC:18145 HPA:HPA001023 MIM:300414
MIM:301900 neXtProt:NX_Q8IWS0 Orphanet:127 PharmGKB:PA33263
PhylomeDB:Q8IWS0 ChiTaRS:PHF6 GenomeRNAi:84295 NextBio:73944
ArrayExpress:Q8IWS0 Bgee:Q8IWS0 CleanEx:HS_PHF6
Genevestigator:Q8IWS0 GermOnline:ENSG00000156531 Uniprot:Q8IWS0
Length = 365
Score = 151 (58.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 49/163 (30%), Positives = 77/163 (47%)
Query: 330 CGFCQSSRISEVTGLMLHYANGKPVVGEEAD--RSHVIHVHSKCIEWAPQVYYAGDTVKN 387
CGFC+S+R E G +L N K + S ++ HS G ++++
Sbjct: 17 CGFCKSNRDKEC-GQLLISENQKVAAHHKCMLFSSALVSSHSD------NESLGGFSIED 69
Query: 388 LKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCAL-EISECRWDTEN--FLVLCP 444
++ E+ RG+KL CS C GA +GC V++C R+YH CAL + ++ R ++V C
Sbjct: 70 VQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCR 129
Query: 445 VHSSVKFPIEKSGHRSIRNRAAPLQLTPQEPSFWGSSPNKAKE 487
H +K+ H N A L+ + E SSP K+
Sbjct: 130 KH-------KKTAH----NSEADLEESFNEHELEPSSPKSKKK 161
Score = 127 (49.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 48/212 (22%), Positives = 87/212 (41%)
Query: 275 PDSVGVKSSGHSQSTVFR--SESLMASKSDSELKSVAALASEKMPPISIDSCANNYICGF 332
P S G + T F+ SE ++ S + ++ ++ P S S CGF
Sbjct: 156 PKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPK-CGF 214
Query: 333 CQ-SSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLKAE 391
C +E G LH N K + + + + + + +K + E
Sbjct: 215 CHVGEEENEARG-KLHIFNAKKAAAHY--KCMLFSSGTVQLTTTSRAEFGDFDIKTVLQE 271
Query: 392 LARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWDTEN-----FLVLCPVH 446
+ RG ++KC+ C GA +GC +++C ++YH C ++ + ++ EN + + C H
Sbjct: 272 IKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQ-DKAKY-IENMSRGIYKLYCKNH 329
Query: 447 SSVKFPIEKSGHRSIRNRAA----PLQLTPQE 474
S E+ R ++R QLT Q+
Sbjct: 330 SGNDERDEEDEERESKSRGKVEIDQQQLTQQQ 361
>UNIPROTKB|Q08DR0 [details] [associations]
symbol:PHF6 "PHD finger protein 6" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
PROSITE:PS50016 SMART:SM00249 GO:GO:0005730 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 PROSITE:PS01359
EMBL:BC123609 IPI:IPI00694604 RefSeq:NP_001069237.1
UniGene:Bt.42123 PRIDE:Q08DR0 GeneID:518186 KEGG:bta:518186
CTD:84295 eggNOG:NOG282606 HOGENOM:HOG000026798 HOVERGEN:HBG049389
InParanoid:Q08DR0 OrthoDB:EOG4K9BCK NextBio:20872603 Uniprot:Q08DR0
Length = 365
Score = 151 (58.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 49/163 (30%), Positives = 77/163 (47%)
Query: 330 CGFCQSSRISEVTGLMLHYANGKPVVGEEAD--RSHVIHVHSKCIEWAPQVYYAGDTVKN 387
CGFC+S+R E G +L N K + S ++ HS G ++++
Sbjct: 17 CGFCKSNRDKEC-GQLLISENQKVAAHHKCMLFSSALVSSHSD------NESLGGFSIED 69
Query: 388 LKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCAL-EISECRWDTEN--FLVLCP 444
++ E+ RG+KL CS C GA +GC V++C R+YH CAL + ++ R ++V C
Sbjct: 70 VQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCR 129
Query: 445 VHSSVKFPIEKSGHRSIRNRAAPLQLTPQEPSFWGSSPNKAKE 487
H +K+ H N A L+ + E SSP K+
Sbjct: 130 KH-------KKTAH----NSEADLEESFNEHELEPSSPKSKKK 161
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 46/211 (21%), Positives = 84/211 (39%)
Query: 275 PDSVGVKSSGHSQSTVFR--SESLMASKSDSELKSVAALASEKMPPISIDSCANNYICGF 332
P S G + T F+ SE ++ S + ++ ++ P S S CGF
Sbjct: 156 PKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPK-CGF 214
Query: 333 CQSSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLKAEL 392
C LH N K + + + + + + +K + E+
Sbjct: 215 CHVGEEENQARGKLHIFNAKKAAAHY--KCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEI 272
Query: 393 ARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWDTEN-----FLVLCPVHS 447
RG ++KC+ C GA +GC +++C ++YH C ++ + ++ EN + + C HS
Sbjct: 273 KRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQ-DKAKY-IENMSRGIYKLYCKNHS 330
Query: 448 SVKFPIEKSGHRSIRNRAA----PLQLTPQE 474
E+ R ++R QLT Q+
Sbjct: 331 GNDERDEEDEERESKSRGKVEIDQQQLTQQQ 361
>MGI|MGI:1918248 [details] [associations]
symbol:Phf6 "PHD finger protein 6" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001965 PROSITE:PS50016
SMART:SM00249 MGI:MGI:1918248 GO:GO:0005730 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 PROSITE:PS01359
GeneTree:ENSGT00530000063780 CTD:84295 eggNOG:NOG282606
HOGENOM:HOG000026798 HOVERGEN:HBG049389 EMBL:AK016480 EMBL:AK028498
EMBL:AK038320 EMBL:AK122560 EMBL:BC043127 EMBL:BC055330
EMBL:BC057374 IPI:IPI00137302 IPI:IPI01016191 RefSeq:NP_081918.1
UniGene:Mm.26870 ProteinModelPortal:Q9D4J7 SMR:Q9D4J7 STRING:Q9D4J7
PhosphoSite:Q9D4J7 PaxDb:Q9D4J7 PRIDE:Q9D4J7
Ensembl:ENSMUST00000078944 Ensembl:ENSMUST00000154864 GeneID:70998
KEGG:mmu:70998 UCSC:uc009teo.1 UCSC:uc009teq.1 NextBio:332793
Bgee:Q9D4J7 CleanEx:MM_PHF6 Genevestigator:Q9D4J7
GermOnline:ENSMUSG00000025626 Uniprot:Q9D4J7
Length = 364
Score = 150 (57.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 49/163 (30%), Positives = 77/163 (47%)
Query: 330 CGFCQSSRISEVTGLMLHYANGKPVVGEEAD--RSHVIHVHSKCIEWAPQVYYAGDTVKN 387
CGFC+S+R E G +L N K + S ++ HS G ++++
Sbjct: 17 CGFCKSNRDKEC-GQLLISENQKVAAHHKCMLFSSALVSSHSD------NESLGGFSIED 69
Query: 388 LKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCAL-EISECRWDTEN--FLVLCP 444
++ E+ RG+KL CS C GA +GC V++C R+YH CAL + ++ R ++V C
Sbjct: 70 VQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCR 129
Query: 445 VHSSVKFPIEKSGHRSIRNRAAPLQLTPQEPSFWGSSPNKAKE 487
H +K+ H N A L+ + E SSP K+
Sbjct: 130 KH-------KKTAH----NSEADLEESFNEHELEPSSPKTKKK 161
Score = 129 (50.5 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 38/154 (24%), Positives = 68/154 (44%)
Query: 330 CGFCQ-SSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNL 388
CGFC +E G LH N K + + + + + + +K +
Sbjct: 212 CGFCHVGEEENEARG-KLHIFNAKKAAAHY--KCMLFSSGTVQLTTTSRAEFGDFDIKTV 268
Query: 389 KAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWDTEN-----FLVLC 443
E+ RG ++KC+ C GA +GC +++C ++YH C ++ + ++ EN + + C
Sbjct: 269 LQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQ-DKAKY-IENMSRGIYKLYC 326
Query: 444 PVHSSVKFPIEKSGHRSIRNR---AAPLQLTPQE 474
HS E+ R ++R A QLT Q+
Sbjct: 327 KNHSGNDERDEEDEERESKSRGRVAIDQQLTQQQ 360
>RGD|2323526 [details] [associations]
symbol:Phf6 "PHD finger protein 6" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 SMART:SM00249 RGD:2323526
GO:GO:0005730 GO:GO:0008270 GeneTree:ENSGT00530000063780 CTD:84295
OrthoDB:EOG4K9BCK OMA:MARGIYK EMBL:CH474185 IPI:IPI00367694
RefSeq:XP_002727335.1 RefSeq:XP_002730341.1
Ensembl:ENSRNOT00000003091 GeneID:100359714 KEGG:rno:100359714
Uniprot:D3ZQV8
Length = 364
Score = 150 (57.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 49/163 (30%), Positives = 77/163 (47%)
Query: 330 CGFCQSSRISEVTGLMLHYANGKPVVGEEAD--RSHVIHVHSKCIEWAPQVYYAGDTVKN 387
CGFC+S+R E G +L N K + S ++ HS G ++++
Sbjct: 17 CGFCKSNRDKEC-GQLLISENQKVAAHHKCMLFSSALVSSHSD------NESLGGFSIED 69
Query: 388 LKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCAL-EISECRWDTEN--FLVLCP 444
++ E+ RG+KL CS C GA +GC V++C R+YH CAL + ++ R ++V C
Sbjct: 70 VQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCR 129
Query: 445 VHSSVKFPIEKSGHRSIRNRAAPLQLTPQEPSFWGSSPNKAKE 487
H +K+ H N A L+ + E SSP K+
Sbjct: 130 KH-------KKTAH----NSEADLEESFNEHELEPSSPKTKKK 161
Score = 129 (50.5 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 38/154 (24%), Positives = 68/154 (44%)
Query: 330 CGFCQ-SSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNL 388
CGFC +E G LH N K + + + + + + +K +
Sbjct: 212 CGFCHVGEEENEARG-KLHIFNAKKAAAHY--KCMLFSSGTVQLTTTSRAEFGDFDIKTV 268
Query: 389 KAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWDTEN-----FLVLC 443
E+ RG ++KC+ C GA +GC +++C ++YH C ++ + ++ EN + + C
Sbjct: 269 LQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQ-DKAKY-IENMSRGIYKLYC 326
Query: 444 PVHSSVKFPIEKSGHRSIRNR---AAPLQLTPQE 474
HS E+ R ++R A QLT Q+
Sbjct: 327 KNHSGNDERDEEDEERESKSRGRVAIDQQLTQQQ 360
>UNIPROTKB|E1C281 [details] [associations]
symbol:PHF6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR001965 SMART:SM00249
GO:GO:0005730 GO:GO:0008270 GeneTree:ENSGT00530000063780
OMA:MARGIYK EMBL:AADN02013297 EMBL:AADN02013298 IPI:IPI00586209
Ensembl:ENSGALT00000009833 Uniprot:E1C281
Length = 365
Score = 150 (57.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 41/149 (27%), Positives = 69/149 (46%)
Query: 330 CGFCQSSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLK 389
CGFC+S++ +E G +L N K A ++ + G ++++++
Sbjct: 17 CGFCRSNKDNEC-GQLLMSENQKVA----AHHKCMLFSSALVSSHTDNESLGGFSIEDIQ 71
Query: 390 AELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCAL-EISECRWDTEN--FLVLCPVH 446
E+ RG+KL CS C GA +GC V++C ++YH CAL + ++ R +++LC H
Sbjct: 72 KEIKRGTKLMCSLCHCPGATIGCDVKTCHKTYHYYCALHDKAQIREKPSQGIYMILCRKH 131
Query: 447 SSVKFPIEKSGHRSIRNRAAPLQLTPQEP 475
E SI +L P P
Sbjct: 132 KKTTHNSEADLEESINEH----ELEPSPP 156
Score = 130 (50.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 56/237 (23%), Positives = 97/237 (40%)
Query: 234 LANRSVKRGFDDRTRQEHRLSSSETAGSFRDSKRLKGFNYGPDSVGVKSSGHSQSTVFRS 293
L + K + E ++ E S KR +G P +K G S+ T RS
Sbjct: 127 LCRKHKKTTHNSEADLEESINEHELEPSPPKGKR-RGRKGKPRKTNLK--GQSEDT--RS 181
Query: 294 ESLMASKSDSELKSVAALASEKMPPISIDSCANNYICGFCQSSRI-SEVTGLMLHYANGK 352
S S E++S + ++ P S S CGFC + +E G LH N K
Sbjct: 182 TS---SHGTDEIESSSY--RDRSPHRSSPSDTKPK-CGFCHAGEEENEARG-KLHIFNAK 234
Query: 353 PVVGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLKAELARGSKLKCSRCGLKGAALGC 412
+ + + + + + +K + E+ RG ++KC+ C GA +GC
Sbjct: 235 KAAAHY--KCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGC 292
Query: 413 YVRSCRRSYHVPCALEISECRWDTEN-----FLVLCPVHSSVKFPIEKSGHRSIRNR 464
+++C ++YH C +E + ++ EN + + C HS E+ R ++R
Sbjct: 293 EIKACIKTYHYHCGVE-DKAKY-IENMSRGIYKLYCKNHSGNDERDEEDEERESKSR 347
>UNIPROTKB|C9JIU5 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC131574
HOGENOM:HOG000234134 HGNC:HGNC:16379 ChiTaRS:TRIM22 EMBL:AC109341
IPI:IPI00884241 ProteinModelPortal:C9JIU5 SMR:C9JIU5 STRING:C9JIU5
Ensembl:ENST00000414641 ArrayExpress:C9JIU5 Bgee:C9JIU5
Uniprot:C9JIU5
Length = 227
Score = 143 (55.4 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 31/91 (34%), Positives = 46/91 (50%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRS-------AQCESECPLCKSQCTYADLRPL 91
E+ CP+CL L + PL L C H FC +CI ++ ES CP+C+++ +LRP
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGNLRPN 71
Query: 92 AFLENIIAIYKGLDASPSSNLLQPVYSAFGR 122
L NI+ K + SP + V G+
Sbjct: 72 RHLANIVERVKEVKMSPQEGQKRDVCEHHGK 102
>UNIPROTKB|F1PRR9 [details] [associations]
symbol:G2E3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR001841 InterPro:IPR000569 InterPro:IPR001965
PROSITE:PS50237 SMART:SM00184 SMART:SM00249 GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004842
SUPFAM:SSF56204 GeneTree:ENSGT00390000005246 OMA:WEQNWEC
EMBL:AAEX03005649 Ensembl:ENSCAFT00000020013 Uniprot:F1PRR9
Length = 728
Score = 154 (59.3 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 35/97 (36%), Positives = 51/97 (52%)
Query: 382 GDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWD-TENFL 440
G +++++ E+ R SKLKCS C GA++GC C+RSYH PC L+ EC + T NF
Sbjct: 85 GFLIEDIRKEVNRASKLKCSICKKTGASIGCVAPRCKRSYHFPCGLQ-RECIFQFTGNFA 143
Query: 441 VLCPVHSSVKFPIEKSGHRSIRNRAAPLQLTPQEPSF 477
C H V+ I + +R L+ PS+
Sbjct: 144 SFCWKHRPVQI-ITSNNYRDSMPCTICLEFIEPIPSY 179
>UNIPROTKB|F1N5U1 [details] [associations]
symbol:G2E3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] Pfam:PF00632 InterPro:IPR001841
InterPro:IPR000569 InterPro:IPR001965 PROSITE:PS50237 SMART:SM00184
SMART:SM00249 GO:GO:0005794 GO:GO:0043066 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004842 GO:GO:0000209 GO:GO:0001824 CTD:55632
SUPFAM:SSF56204 GeneTree:ENSGT00390000005246 OMA:WEQNWEC
EMBL:DAAA02052656 EMBL:DAAA02052657 IPI:IPI00728548
RefSeq:NP_001033760.2 UniGene:Bt.58897 Ensembl:ENSBTAT00000002121
GeneID:508575 KEGG:bta:508575 NextBio:20868581 Uniprot:F1N5U1
Length = 703
Score = 152 (58.6 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 382 GDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWD-TENFL 440
G +++++ E+ R SKLKCS C GA++GC C+RSYH PC L+ EC + T NF
Sbjct: 63 GFLIEDIRKEVTRASKLKCSVCKKTGASIGCVAPRCKRSYHFPCGLQ-RECIFQFTGNFA 121
Query: 441 VLCPVHSSVK 450
C H V+
Sbjct: 122 SFCWKHRPVQ 131
>ZFIN|ZDB-GENE-030131-5278 [details] [associations]
symbol:phf6 "PHD finger protein 6" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 SMART:SM00249 ZFIN:ZDB-GENE-030131-5278
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 CTD:84295
eggNOG:NOG282606 HOGENOM:HOG000026798 HOVERGEN:HBG049389
OrthoDB:EOG4K9BCK EMBL:BC044163 IPI:IPI00494642 RefSeq:NP_956059.1
UniGene:Dr.75858 PRIDE:Q803W6 GeneID:327070 KEGG:dre:327070
InParanoid:Q803W6 NextBio:20809867 ArrayExpress:Q803W6 Bgee:Q803W6
Uniprot:Q803W6
Length = 363
Score = 147 (56.8 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 39/128 (30%), Positives = 68/128 (53%)
Query: 330 CGFCQSSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYA-------- 381
C FC+++R E G+ +V E SH + H KC+ ++ + +
Sbjct: 15 CAFCRTNRDKEC---------GQLLVAE----SHRVAAHHKCMLFSSALVTSHSDSENIG 61
Query: 382 GDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCAL-EISECRWDTEN-- 438
G +++++K E+ RG+KL C+ C GA +GC V++CRR+YH CAL + ++ + +
Sbjct: 62 GFSIEDVKKEIKRGNKLMCTSCHRPGATIGCDVKTCRRTYHYYCALWDKAQTKENPSQGI 121
Query: 439 FLVLCPVH 446
+LV C H
Sbjct: 122 YLVYCRKH 129
Score = 139 (54.0 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 35/140 (25%), Positives = 65/140 (46%)
Query: 330 CGFCQSSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLK 389
CGFC + T +LH N K V + + + + + + + +K +
Sbjct: 210 CGFCHAGEEENETRGVLHSDNAKKVAAH--CKCMLFSSGTVQLTTSSRAEFGNFDIKTVI 267
Query: 390 AELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWDTEN-----FLVLCP 444
E+ RG ++KC+ C GA +GC +++C ++YH C L+ + ++ EN + + C
Sbjct: 268 QEIKRGKRMKCTLCAQLGATIGCEIKACVKTYHYHCGLQ-DKAKY-IENMARGIYKLYCK 325
Query: 445 VHSSVKFPIEKSGHRSIRNR 464
HS + E+ R R+R
Sbjct: 326 NHSGNEERDEEDEERESRSR 345
>UNIPROTKB|C9JWH0 [details] [associations]
symbol:PHF11 "PHD finger protein 11" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 SMART:SM00249 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HOGENOM:HOG000290637 EMBL:AL139321
HGNC:HGNC:17024 ChiTaRS:PHF11 IPI:IPI00945182
ProteinModelPortal:C9JWH0 STRING:C9JWH0 Ensembl:ENST00000496612
ArrayExpress:C9JWH0 Bgee:C9JWH0 Uniprot:C9JWH0
Length = 133
Score = 126 (49.4 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 385 VKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALE---ISECRWDTENFLV 441
V+++K E+ RG KLKC C +GA +GC +++C ++YH CA + + + + +
Sbjct: 27 VESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKL 86
Query: 442 LCPVHSSVKFPI-----EKSGHRSIRNRAAPLQLTPQEP 475
LC H+ +FPI + SG + R R PL +P
Sbjct: 87 LCQQHA--QFPIIAQSAKFSGVKRKRGRKKPLSGNHVQP 123
>UNIPROTKB|E9PFZ0 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR011364 PIRSF:PIRSF001734 PRINTS:PR00493
InterPro:IPR001357 Pfam:PF00533 GO:GO:0005634 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 PANTHER:PTHR13763 CTD:672 KO:K10605
InterPro:IPR025994 Pfam:PF12820 EMBL:AC060780 EMBL:AC135721
RefSeq:NP_009228.2 UniGene:Hs.194143 DNASU:672 GeneID:672
KEGG:hsa:672 HGNC:HGNC:1100 ChiTaRS:BRCA1 GenomeRNAi:672
NextBio:2752 IPI:IPI01014513 ProteinModelPortal:E9PFZ0 SMR:E9PFZ0
PRIDE:E9PFZ0 Ensembl:ENST00000493795 ArrayExpress:E9PFZ0
Bgee:E9PFZ0 Uniprot:E9PFZ0
Length = 1816
Score = 159 (61.0 bits), Expect = 5.6e-07, Sum P(4) = 5.6e-07
Identities = 43/162 (26%), Positives = 72/162 (44%)
Query: 473 QEPSFWGSSPNKAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAK 532
++P S+ K S L+ EE +L+ +F + ++ THV+ TDA+
Sbjct: 1588 EKPELTASTERVNKRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAE 1647
Query: 533 GSCTRTLKVLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLD--NHGCEEGPKTGRL 590
C RTLK + I G WV+ W+ ++ + E +E+ D N +GPK R
Sbjct: 1648 FVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKMLNEHDFEVRGDVVNGRNHQGPKRARE 1707
Query: 591 RALNKAPKLFDGLSFYFSGNFMLGYKEDLQSLVITAGGTIWK 632
++ K+F GL G F + L+ +V G ++ K
Sbjct: 1708 ---SQDRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVK 1746
Score = 52 (23.4 bits), Expect = 5.6e-07, Sum P(4) = 5.6e-07
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 355 VGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLKAELAR--GSKLKCS-RCGL 405
V +EA S++ V S E + G + +N++AEL R G KL R G+
Sbjct: 988 VFKEASSSNINEVGSSTNEVGSSINEIGSSDENIQAELGRNRGPKLNAMLRLGV 1041
Score = 49 (22.3 bits), Expect = 5.6e-07, Sum P(4) = 5.6e-07
Identities = 18/76 (23%), Positives = 32/76 (42%)
Query: 74 SECPLCKSQCTYADLRPLA-FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQ 132
S+CPLCK+ T L+ F + + + K + A L+ S +E+NS
Sbjct: 12 SQCPLCKNDITKRSLQESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHL 71
Query: 133 SLSANTLVQVSFNNSA 148
+ + + + N A
Sbjct: 72 KDEVSIIQSMGYRNRA 87
Score = 39 (18.8 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 383 DTVKNLKAELARGSKLKCS 401
DT LK A GS KCS
Sbjct: 648 DTFPELKLTNAPGSFTKCS 666
Score = 38 (18.4 bits), Expect = 5.6e-07, Sum P(4) = 5.6e-07
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 202 QLSPCSP-PSFGDIKGSDN--ESNDQGGELSPESYLANRSVKRGFDDRTRQEHRLSSSET 258
++ P P SF K N E N + +SPE + N ++ +R R + +
Sbjct: 932 RIPPLFPIKSFVKTKCKKNLLEENFEEHSMSPEREMGNENIPSTVSTISRNNIRENVFKE 991
Query: 259 AGS 261
A S
Sbjct: 992 ASS 994
>TAIR|locus:2083681 [details] [associations]
symbol:AT3G15120 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009888 "tissue development" evidence=RCA]
[GO:0010638 "positive regulation of organelle organization"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0009506 GO:GO:0005524 EMBL:CP002686 GO:GO:0017111
IPI:IPI00537350 RefSeq:NP_188130.1 UniGene:At.39103 PRIDE:F4IXH3
EnsemblPlants:AT3G15120.1 GeneID:820743 KEGG:ath:AT3G15120
OMA:LLGPIND Uniprot:F4IXH3
Length = 1954
Score = 153 (58.9 bits), Expect = 5.7e-07, Sum P(3) = 5.7e-07
Identities = 33/81 (40%), Positives = 44/81 (54%)
Query: 367 VHSKCIEWAPQVYYAG-DTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPC 425
VH C W+P+VY+AG +KN++A L RG LKC+RC GA GC R C R+
Sbjct: 560 VHQNCAVWSPEVYFAGVGCLKNIRAALFRGRSLKCTRCDRPGATTGC--RPCARA----- 612
Query: 426 ALEISECRWDTENFLVLCPVH 446
+ C +D FL+ C H
Sbjct: 613 ----NGCIFDHRKFLIACTDH 629
Score = 61 (26.5 bits), Expect = 5.7e-07, Sum P(3) = 5.7e-07
Identities = 30/142 (21%), Positives = 53/142 (37%)
Query: 117 YSAFGRHQEDNSSSGQSLSANTLVQVSFNNSACDGQKGKGFELTGMGENKRDGGQNPNSA 176
+ A GR + + + N ++S A D ++ KG L G NK + P
Sbjct: 118 FQASGRQRRVVKGKRKLVFRNRACELSEKAEASDREEEKG-ALKGGKLNK---AKKPVDV 173
Query: 177 QPSSHTQAGGIRDCRPAQIDINQLDQLSPCSPPSFGDIKGSDNESNDQGGELSPESYLAN 236
+ S ++ GG D+ + S D S++E + Q + E Y
Sbjct: 174 KESESSEDGGKESDTSNSEDVQKESDTSNSE-----DESASESEESMQADSAAREKYQEK 228
Query: 237 RSVKRGFDDRTRQEHRLSSSET 258
++ KR + E + +ET
Sbjct: 229 KATKRSVFLESENEAEVDRTET 250
Score = 42 (19.8 bits), Expect = 5.7e-07, Sum P(3) = 5.7e-07
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 445 VHSSVKFPIEKSGHRSIRNRAAPLQL-TPQEPSFWGSSPNKAKEWVFCGSALSVEEK 500
V S + IE SG R +A L L +P +P+ + E G+ +S++EK
Sbjct: 1667 VISDTEMMIEDSGVNPFR-QAVLLDLNSPAADHEQNETPHGSCEVETTGTVISLQEK 1722
>MGI|MGI:2685640 [details] [associations]
symbol:Trim75 "tripartite motif-containing 75" species:10090
"Mus musculus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 MGI:MGI:2685640 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HSSP:Q9CQJ4 HOGENOM:HOG000234133 HOVERGEN:HBG001357
GeneTree:ENSGT00700000104307 OrthoDB:EOG4NP73C eggNOG:NOG254111
EMBL:AK136018 IPI:IPI00339960 RefSeq:NP_001028601.1
UniGene:Mm.334557 ProteinModelPortal:Q3UWZ0 SMR:Q3UWZ0 PRIDE:Q3UWZ0
Ensembl:ENSMUST00000095295 GeneID:333307 KEGG:mmu:333307 CTD:391714
InParanoid:Q3UWZ0 KO:K12037 OMA:NILVETI NextBio:399957 Bgee:Q3UWZ0
Genevestigator:Q3UWZ0 Uniprot:Q3UWZ0
Length = 467
Score = 147 (56.8 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 29/69 (42%), Positives = 40/69 (57%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIP---RSAQCESECPLCKSQCTYADLR 89
L +L E KCP+CL+ + P+ + C H FC SCI Q S CP+C+ QC + +LR
Sbjct: 7 LARLQKETKCPICLDDLTDPVTVECGHNFCRSCIKDFWAGQQATSSCPVCRHQCQHRNLR 66
Query: 90 PLAFLENII 98
A L N+I
Sbjct: 67 SNAQLGNMI 75
>MGI|MGI:1923931 [details] [associations]
symbol:Trim12a "tripartite motif-containing 12A"
species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 MGI:MGI:1923931
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00690000101646 HOVERGEN:HBG001357
HOGENOM:HOG000234134 EMBL:AF220126 EMBL:AK009769 IPI:IPI00469341
RefSeq:NP_076324.2 UniGene:Mm.458309 UniGene:Mm.486388
ProteinModelPortal:Q99PQ1 SMR:Q99PQ1 STRING:Q99PQ1 PRIDE:Q99PQ1
Ensembl:ENSMUST00000070943 Ensembl:ENSMUST00000106839 GeneID:76681
KEGG:mmu:76681 CTD:76681 eggNOG:NOG310455 NextBio:345615
Bgee:Q99PQ1 CleanEx:MM_TRIM12 Genevestigator:Q99PQ1
GermOnline:ENSMUSG00000066258 Uniprot:Q99PQ1
Length = 284
Score = 145 (56.1 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 32/97 (32%), Positives = 50/97 (51%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIP---RSAQCESE---CPLCKSQCTYA 86
++ L E+ CP+CLNL +P+ C H FC CI S +C+ + CP+C+ ++
Sbjct: 6 MKNLKEEVTCPVCLNLMVKPVSADCGHTFCQGCITLYFESIKCDKKVFICPVCRISYQFS 65
Query: 87 DLRPLAFLENIIAIYKGLDASPSSNLLQPVYSAFGRH 123
+LRP + NI+ K SP Q V++ RH
Sbjct: 66 NLRPNRNVANIVERLKMFKPSPEEE--QKVFNC-ARH 99
Score = 38 (18.4 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 500 KLLLVRFGNMIGVPVSKFWKP 520
++L VR ++ G K WKP
Sbjct: 246 EILQVRLQDVPGSESQKAWKP 266
>RGD|1310853 [details] [associations]
symbol:Phf11 "PHD finger protein 11" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
PROSITE:PS50016 SMART:SM00249 RGD:1310853 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR013083 PROSITE:PS01359
eggNOG:NOG276632 HOGENOM:HOG000290637 OrthoDB:EOG4QZ7M7 CTD:51131
EMBL:BC088433 IPI:IPI00390890 RefSeq:NP_001019443.1
UniGene:Rn.213394 STRING:Q5I0E2 GeneID:361051 KEGG:rno:361051
UCSC:RGD:1310853 InParanoid:Q5I0E2 NextBio:675034
ArrayExpress:Q5I0E2 Genevestigator:Q5I0E2 Uniprot:Q5I0E2
Length = 336
Score = 144 (55.7 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 385 VKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALE---ISECRWDTENFLV 441
VK++K E+ RG +LKCS C GA +GC + SCR+SYH CA + I + D + +
Sbjct: 78 VKSVKKEIWRGRRLKCSLCNKGGATVGCDLSSCRKSYHYVCAKKDHAIPQVDEDLGTYKI 137
Query: 442 LCPVHS-SVKFPIEKSGHRSIRNRAAPLQLT---PQEP 475
CP H + E++ S++ L+ P EP
Sbjct: 138 FCPEHPPQQEETTERADSPSVKKTGKKKSLSSGPPTEP 175
>UNIPROTKB|Q5I0E2 [details] [associations]
symbol:Phf11 "PHD finger protein 11" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 PROSITE:PS50016 SMART:SM00249 RGD:1310853
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083 PROSITE:PS01359
eggNOG:NOG276632 HOGENOM:HOG000290637 OrthoDB:EOG4QZ7M7 CTD:51131
EMBL:BC088433 IPI:IPI00390890 RefSeq:NP_001019443.1
UniGene:Rn.213394 STRING:Q5I0E2 GeneID:361051 KEGG:rno:361051
UCSC:RGD:1310853 InParanoid:Q5I0E2 NextBio:675034
ArrayExpress:Q5I0E2 Genevestigator:Q5I0E2 Uniprot:Q5I0E2
Length = 336
Score = 144 (55.7 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 385 VKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALE---ISECRWDTENFLV 441
VK++K E+ RG +LKCS C GA +GC + SCR+SYH CA + I + D + +
Sbjct: 78 VKSVKKEIWRGRRLKCSLCNKGGATVGCDLSSCRKSYHYVCAKKDHAIPQVDEDLGTYKI 137
Query: 442 LCPVHS-SVKFPIEKSGHRSIRNRAAPLQLT---PQEP 475
CP H + E++ S++ L+ P EP
Sbjct: 138 FCPEHPPQQEETTERADSPSVKKTGKKKSLSSGPPTEP 175
>UNIPROTKB|C9JWC5 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC131574
HOGENOM:HOG000234134 HGNC:HGNC:16379 ChiTaRS:TRIM22 EMBL:AC109341
IPI:IPI00657693 ProteinModelPortal:C9JWC5 SMR:C9JWC5 STRING:C9JWC5
Ensembl:ENST00000454828 UCSC:uc009yet.2 ArrayExpress:C9JWC5
Bgee:C9JWC5 Uniprot:C9JWC5
Length = 305
Score = 143 (55.4 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 31/91 (34%), Positives = 46/91 (50%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRS-------AQCESECPLCKSQCTYADLRPL 91
E+ CP+CL L + PL L C H FC +CI ++ ES CP+C+++ +LRP
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGNLRPN 71
Query: 92 AFLENIIAIYKGLDASPSSNLLQPVYSAFGR 122
L NI+ K + SP + V G+
Sbjct: 72 RHLANIVERVKEVKMSPQEGQKRDVCEHHGK 102
>UNIPROTKB|F1SHF3 [details] [associations]
symbol:G2E3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] Pfam:PF00632 InterPro:IPR001841
InterPro:IPR000569 InterPro:IPR001965 PROSITE:PS50237 SMART:SM00184
SMART:SM00249 GO:GO:0005794 GO:GO:0043066 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004842 GO:GO:0000209 GO:GO:0001824
SUPFAM:SSF56204 GeneTree:ENSGT00390000005246 OMA:WEQNWEC
EMBL:CT954260 Ensembl:ENSSSCT00000002207 Uniprot:F1SHF3
Length = 705
Score = 149 (57.5 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 30/70 (42%), Positives = 41/70 (58%)
Query: 382 GDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWD-TENFL 440
G ++++K E+ R SKLKC C GA++GC C+RSYH PC L+ EC + T NF
Sbjct: 63 GFLIEDIKKEVTRASKLKCCICKKTGASIGCVAPRCKRSYHFPCGLQ-RECIFQFTGNFA 121
Query: 441 VLCPVHSSVK 450
C H V+
Sbjct: 122 SFCWNHRPVQ 131
>UNIPROTKB|F5GX24 [details] [associations]
symbol:G2E3 "G2/M phase-specific E3 ubiquitin-protein
ligase" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] Pfam:PF00632
InterPro:IPR001841 InterPro:IPR000569 InterPro:IPR001965
PROSITE:PS50237 SMART:SM00184 SMART:SM00249 GO:GO:0005794
GO:GO:0043066 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004842 GO:GO:0000209
GO:GO:0001824 SUPFAM:SSF56204 HGNC:HGNC:20338 EMBL:AL117355
IPI:IPI01014463 ProteinModelPortal:F5GX24 SMR:F5GX24
Ensembl:ENST00000438909 ArrayExpress:F5GX24 Bgee:F5GX24
Uniprot:F5GX24
Length = 660
Score = 148 (57.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/97 (35%), Positives = 50/97 (51%)
Query: 382 GDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWD-TENFL 440
G +++++ E+ R SKLKC C GA++GC C+RSYH PC L+ EC + T NF
Sbjct: 17 GFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQ-RECIFQFTGNFA 75
Query: 441 VLCPVHSSVKFPIEKSGHRSIRNRAAPLQLTPQEPSF 477
C H V+ I + +R L+ PS+
Sbjct: 76 SFCWDHRPVQI-ITSNNYRESLPCTICLEFIEPIPSY 111
>UNIPROTKB|Q7L622 [details] [associations]
symbol:G2E3 "G2/M phase-specific E3 ubiquitin-protein
ligase" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] Pfam:PF00632 InterPro:IPR001841 InterPro:IPR000569
InterPro:IPR001965 PROSITE:PS50016 PROSITE:PS50237 SMART:SM00184
SMART:SM00249 UniPathway:UPA00143 GO:GO:0005794 GO:GO:0006915
GO:GO:0043066 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004842
GO:GO:0000209 GO:GO:0001824 HSSP:Q9DAG9 CTD:55632 eggNOG:NOG304942
HOGENOM:HOG000112684 HOVERGEN:HBG055656 OrthoDB:EOG4R23T7
SUPFAM:SSF56204 EMBL:AB037754 EMBL:AK000340 EMBL:AK022867
EMBL:BC000973 IPI:IPI00479641 RefSeq:NP_060239.2 UniGene:Hs.509008
UniGene:Hs.605081 ProteinModelPortal:Q7L622 SMR:Q7L622
IntAct:Q7L622 MINT:MINT-1441199 STRING:Q7L622 PhosphoSite:Q7L622
DMDM:74738611 PRIDE:Q7L622 DNASU:55632 Ensembl:ENST00000206595
GeneID:55632 KEGG:hsa:55632 UCSC:uc001wqk.2 GeneCards:GC14P031028
HGNC:HGNC:20338 HPA:HPA001601 MIM:611299 neXtProt:NX_Q7L622
PharmGKB:PA164720127 InParanoid:Q7L622 GenomeRNAi:55632
NextBio:60275 ArrayExpress:Q7L622 Bgee:Q7L622 CleanEx:HS_KIAA1333
Genevestigator:Q7L622 GermOnline:ENSG00000092140 Uniprot:Q7L622
Length = 706
Score = 148 (57.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 34/97 (35%), Positives = 50/97 (51%)
Query: 382 GDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWD-TENFL 440
G +++++ E+ R SKLKC C GA++GC C+RSYH PC L+ EC + T NF
Sbjct: 63 GFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQ-RECIFQFTGNFA 121
Query: 441 VLCPVHSSVKFPIEKSGHRSIRNRAAPLQLTPQEPSF 477
C H V+ I + +R L+ PS+
Sbjct: 122 SFCWDHRPVQI-ITSNNYRESLPCTICLEFIEPIPSY 157
>UNIPROTKB|G3V483 [details] [associations]
symbol:G2E3 "G2/M phase-specific E3 ubiquitin-protein
ligase" species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR001841 InterPro:IPR000569 InterPro:IPR001965
PROSITE:PS50237 SMART:SM00184 SMART:SM00249 GO:GO:0005794
GO:GO:0046872 GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004842 SUPFAM:SSF56204
HGNC:HGNC:20338 EMBL:AL117355 ProteinModelPortal:G3V483 SMR:G3V483
Ensembl:ENST00000553504 OMA:WEQNWEC ArrayExpress:G3V483 Bgee:G3V483
Uniprot:G3V483
Length = 736
Score = 148 (57.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 34/97 (35%), Positives = 50/97 (51%)
Query: 382 GDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWD-TENFL 440
G +++++ E+ R SKLKC C GA++GC C+RSYH PC L+ EC + T NF
Sbjct: 93 GFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQ-RECIFQFTGNFA 151
Query: 441 VLCPVHSSVKFPIEKSGHRSIRNRAAPLQLTPQEPSF 477
C H V+ I + +R L+ PS+
Sbjct: 152 SFCWDHRPVQI-ITSNNYRESLPCTICLEFIEPIPSY 187
>UNIPROTKB|E7EP70 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR011364 PIRSF:PIRSF001734 PRINTS:PR00493
InterPro:IPR001357 Pfam:PF00533 GO:GO:0005634 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820
EMBL:AC060780 EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1
IPI:IPI01008775 SMR:E7EP70 Ensembl:ENST00000309486 Uniprot:E7EP70
Length = 1567
Score = 159 (61.0 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 43/162 (26%), Positives = 72/162 (44%)
Query: 473 QEPSFWGSSPNKAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAK 532
++P S+ K S L+ EE +L+ +F + ++ THV+ TDA+
Sbjct: 1339 EKPELTASTERVNKRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAE 1398
Query: 533 GSCTRTLKVLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLD--NHGCEEGPKTGRL 590
C RTLK + I G WV+ W+ ++ + E +E+ D N +GPK R
Sbjct: 1399 FVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKMLNEHDFEVRGDVVNGRNHQGPKRARE 1458
Query: 591 RALNKAPKLFDGLSFYFSGNFMLGYKEDLQSLVITAGGTIWK 632
++ K+F GL G F + L+ +V G ++ K
Sbjct: 1459 ---SQDRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVK 1497
Score = 52 (23.4 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 355 VGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLKAELAR--GSKLKCS-RCGL 405
V +EA S++ V S E + G + +N++AEL R G KL R G+
Sbjct: 739 VFKEASSSNINEVGSSTNEVGSSINEIGSSDENIQAELGRNRGPKLNAMLRLGV 792
Score = 39 (18.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 383 DTVKNLKAELARGSKLKCS 401
DT LK A GS KCS
Sbjct: 399 DTFPELKLTNAPGSFTKCS 417
Score = 38 (18.4 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 202 QLSPCSP-PSFGDIKGSDN--ESNDQGGELSPESYLANRSVKRGFDDRTRQEHRLSSSET 258
++ P P SF K N E N + +SPE + N ++ +R R + +
Sbjct: 683 RIPPLFPIKSFVKTKCKKNLLEENFEEHSMSPEREMGNENIPSTVSTISRNNIRENVFKE 742
Query: 259 AGS 261
A S
Sbjct: 743 ASS 745
>UNIPROTKB|G3N137 [details] [associations]
symbol:G3N137 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00690000101726 EMBL:DAAA02071445
Ensembl:ENSBTAT00000063393 OMA:PAFQCPT Uniprot:G3N137
Length = 160
Score = 121 (47.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 35/96 (36%), Positives = 47/96 (48%)
Query: 31 LHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRS--AQC---ESECPLCKSQCTY 85
L ++ L EL CP+CL LF PLLLPC H C SC R + C ES P+ QC
Sbjct: 10 LKMETLESELTCPICLELFEDPLLLPCAHSLCFSCAHRILVSSCSSGESIEPITAFQC-- 67
Query: 86 ADLRPLAFLENIIAI-YKGLDASPSSNLLQPVYSAF 120
P +I++ ++GLD + LQ + F
Sbjct: 68 ----PTC--RYVISLNHRGLDGLKRNVTLQNIIDRF 97
>UNIPROTKB|F1SN25 [details] [associations]
symbol:TRIM69 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003877
Pfam:PF00622 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104222
OMA:IAAHKEN EMBL:CU480607 Ensembl:ENSSSCT00000005168 Uniprot:F1SN25
Length = 500
Score = 144 (55.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 31/80 (38%), Positives = 43/80 (53%)
Query: 28 PLVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESE---CPLCKSQCT 84
P + +Q + +EL CPLC + F PL+L C H FC SCI + E++ CP CK C
Sbjct: 27 PSKVQIQDITMELHCPLCNDWFRDPLMLTCGHNFCQSCIENFWKQEAKETFCPECKMLCQ 86
Query: 85 YADLRPLAFLENIIAIYKGL 104
Y++ LE +I K L
Sbjct: 87 YSNCTFNLVLEKLIEKIKKL 106
>DICTYBASE|DDB_G0293300 [details] [associations]
symbol:DDB_G0293300 "Breast cancer type 1
susceptibility protein" species:44689 "Dictyostelium discoideum"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR011364
InterPro:IPR001357 dictyBase:DDB_G0293300 Pfam:PF00533
GO:GO:0005634 GO:GO:0003677 GO:GO:0008270 GO:GO:0006281
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 PANTHER:PTHR13763
EMBL:AAFI02000201 RefSeq:XP_629186.1 ProteinModelPortal:Q54C05
EnsemblProtists:DDB0191863 GeneID:8629145 KEGG:ddi:DDB_G0293300
eggNOG:NOG322841 InParanoid:Q54C05 OMA:DKQQSQD Uniprot:Q54C05
Length = 1217
Score = 147 (56.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 49/160 (30%), Positives = 79/160 (49%)
Query: 480 SSP-NKAK-EW-VFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAAT-DAKGS- 534
SSP NK+K E + + L+ +L + + IG + + VTHV+ +T D GS
Sbjct: 973 SSPLNKSKIELPIIIATGLTGLMQLHIHSLCSAIGGKLVTEFNDQVTHVVCSTLDGDGSK 1032
Query: 535 ---CTRTLKVLMAILNGN-WVLKIDWIKACMEAMNPVGEEPYEINLDNHGCEEGPKTGRL 590
RT+K M I G W++ DWI + V E +EI D+ G P R
Sbjct: 1033 ENLAKRTIKYQMGIGRGGLWLVSFDWILESLNENQWVNESEFEIQGDSIGLGS-PLKSR- 1090
Query: 591 RALNKAPKLFDGLSFYFSGNFMLGYKEDLQSLVITAGGTI 630
+ L + +LF G SFY +G F ++++ S++ ++GG +
Sbjct: 1091 QQLFETKRLFYGQSFYLAGEFQSPSRQEITSVIKSSGGIV 1130
Score = 52 (23.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 44/196 (22%), Positives = 70/196 (35%)
Query: 117 YSAFGRHQEDNSSSGQSLSANTLVQVSFNNSACDGQKGKGFELTGMGENKRDGGQNPNSA 176
YS+ HQ + S + + + N G G ++G + DGG N +
Sbjct: 762 YSSISLHQPIFVTP--SPRGSNMGSIVSNGGGSGGSSGSS-SISGSISSSSDGGLNHQQS 818
Query: 177 QPSSHTQAGGIRDCRPAQIDINQLDQLSPC-SP-PSFGD---IKGSDNESNDQGGELSPE 231
Q S +Q + I Q P SP PS I+ + +N Q +L
Sbjct: 819 QSSQSSQNSSSSSSSSSIFSI-PAGQKPPTPSPLPSIQPSLPIQNTTTATN-QSSQLGSS 876
Query: 232 SYLANRSVKRGFDDRTRQEHR-LSSSETAGSFRDSKRLKGFNYGPDSV--GVKSSGHSQS 288
+ + + S T E R ++ +F DS++ + P K S HSQ
Sbjct: 877 NNINSNSNNHS---NTYDELRSFQIPQSQNNFEDSQQTLDVDQQPSQYLSPKKVSQHSQQ 933
Query: 289 TVFRSESLMASKSDSE 304
+ L KS S+
Sbjct: 934 ---KKNQLSQQKSLSQ 946
Score = 52 (23.4 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 34/137 (24%), Positives = 54/137 (39%)
Query: 105 DASPSSNLLQPVY-----SAFGRHQEDNSSSGQSLSANT---LVQVSFNNSAC-DGQKGK 155
++S S +L P Y S +Q +N+++ + + N ++ V+ NN+ D K K
Sbjct: 7 NSSDLSQMLDPEYFKSQSSGDSNNQNNNNNNNNNNNNNNNNNIIDVNNNNNNIKDSPKKK 66
Query: 156 GFELTGMGENKRDG-GQNPNSAQPSSHTQAGGIRDCRPAQIDINQ--LDQLSPCSPPSF- 211
T E QN N+ Q +++ D I+ N D P SF
Sbjct: 67 TVRFTSQVEFVEPSQSQNNNNNQNNNNNNNNSSPDINMFDINNNNNIFDVFQDDIPNSFM 126
Query: 212 -GDIKGSD----NESND 223
I GS NE +D
Sbjct: 127 LSVIDGSQQIIFNEEDD 143
Score = 42 (19.8 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 277 SVGVKSSG---HSQSTVFRSESLMASKSDSELKSVAALASEKMPP 318
S+ S G H QS S+S S S S S+ ++ + + PP
Sbjct: 804 SISSSSDGGLNHQQSQ--SSQSSQNSSSSSSSSSIFSIPAGQKPP 846
Score = 40 (19.1 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 104 LDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSFNNSACDGQK 153
+D PS L S + +++ S +SLS L Q +S+ Q+
Sbjct: 914 VDQQPSQYLSPKKVSQHSQQKKNQLSQQKSLSQQQLSQQQHQSSSQQQQQ 963
>UNIPROTKB|Q8IYM9 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0051607
"defense response to virus" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0070206
"protein trimerization" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0009615 "response to virus"
evidence=TAS] [GO:0006955 "immune response" evidence=TAS]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0005794 GO:GO:0003714 GO:GO:0019048
GO:GO:0006955 GO:GO:0046872 GO:GO:0016874 GO:GO:0016607
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0016567
GO:GO:0051607 GO:GO:0009615 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0015030 GO:GO:0070206
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HOGENOM:HOG000234134 OrthoDB:EOG4229JJ KO:K11999 EMBL:X82200
EMBL:BC022281 EMBL:BC035582 IPI:IPI00477398 IPI:IPI00477812
PIR:A57041 RefSeq:NP_001186502.1 RefSeq:NP_006065.2
UniGene:Hs.501778 UniGene:Hs.684559 UniGene:Hs.733231
ProteinModelPortal:Q8IYM9 SMR:Q8IYM9 IntAct:Q8IYM9
MINT:MINT-2868217 STRING:Q8IYM9 PhosphoSite:Q8IYM9 DMDM:47606181
PaxDb:Q8IYM9 PRIDE:Q8IYM9 DNASU:10346 Ensembl:ENST00000379965
GeneID:10346 KEGG:hsa:10346 UCSC:uc001mbr.3 UCSC:uc009yes.3
CTD:10346 GeneCards:GC11P005667 HGNC:HGNC:16379 HPA:HPA003307
HPA:HPA003575 MIM:606559 neXtProt:NX_Q8IYM9 PharmGKB:PA38129
eggNOG:NOG258942 InParanoid:Q8IYM9 OMA:HQTFRIN ChiTaRS:TRIM22
GenomeRNAi:10346 NextBio:39235 ArrayExpress:Q8IYM9 Bgee:Q8IYM9
CleanEx:HS_TRIM22 Genevestigator:Q8IYM9 GermOnline:ENSG00000132274
Uniprot:Q8IYM9
Length = 498
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 31/91 (34%), Positives = 46/91 (50%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRS-------AQCESECPLCKSQCTYADLRPL 91
E+ CP+CL L + PL L C H FC +CI ++ ES CP+C+++ +LRP
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGNLRPN 71
Query: 92 AFLENIIAIYKGLDASPSSNLLQPVYSAFGR 122
L NI+ K + SP + V G+
Sbjct: 72 RHLANIVERVKEVKMSPQEGQKRDVCEHHGK 102
>UNIPROTKB|J9P8B7 [details] [associations]
symbol:RAI1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 SMART:SM00249 GO:GO:0008270
GeneTree:ENSGT00530000063684 EMBL:AAEX03003724 EMBL:AAEX03003725
EMBL:AAEX03003726 EMBL:AAEX03003727 EMBL:AAEX03003728
Ensembl:ENSCAFT00000048471 Uniprot:J9P8B7
Length = 1867
Score = 140 (54.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 27/80 (33%), Positives = 37/80 (46%)
Query: 367 VHSKCIEWAPQVYYAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCA 426
VH C W VY + L+ + + CS C GA +GC + C +YH PCA
Sbjct: 1785 VHEACAVWTGGVYLVAGKLFGLQEAMKVAVDMTCSSCQEAGATIGCCHKGCTHTYHYPCA 1844
Query: 427 LEISECRWDTENFLVLCPVH 446
+ C + ENF + CP H
Sbjct: 1845 SDAG-CIFMEENFSLKCPKH 1863
Score = 62 (26.9 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 29/92 (31%), Positives = 40/92 (43%)
Query: 172 NPNSAQPSSHTQAGGIRDCRPAQIDINQLDQLSPCSPPSFGDIKGS-DNESND-QGGELS 229
+P A S TQAG +C+P Q D + LS S S + +N SN Q LS
Sbjct: 392 SPTDAASSVDTQAG---NCKPLQKDKLPENLLSDLSLQSLTALTSQVENISNTVQQLLLS 448
Query: 230 PESYLANRSVKRGFDDRTRQEHRLSSSETAGS 261
+ +SVK RT ++H+ GS
Sbjct: 449 KAAAPQKKSVKN-LVSRTPEQHKSQHCSPEGS 479
Score = 39 (18.8 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 161 GMGENKRDGG-QNPNSAQPSSHTQAGGIRDCRP 192
G GE+ GG + P + + +Q+ R C+P
Sbjct: 1444 GGGEDSSGGGGKKPKTEELGLASQSPEGRPCQP 1476
>UNIPROTKB|E2RE72 [details] [associations]
symbol:RAI1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 SMART:SM00249 GO:GO:0008270
GeneTree:ENSGT00530000063684 OMA:PRMCTRS EMBL:AAEX03003724
EMBL:AAEX03003725 EMBL:AAEX03003726 EMBL:AAEX03003727
EMBL:AAEX03003728 Ensembl:ENSCAFT00000029281 Uniprot:E2RE72
Length = 1896
Score = 140 (54.3 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 27/80 (33%), Positives = 37/80 (46%)
Query: 367 VHSKCIEWAPQVYYAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCA 426
VH C W VY + L+ + + CS C GA +GC + C +YH PCA
Sbjct: 1813 VHEACAVWTGGVYLVAGKLFGLQEAMKVAVDMTCSSCQEAGATIGCCHKGCTHTYHYPCA 1872
Query: 427 LEISECRWDTENFLVLCPVH 446
+ C + ENF + CP H
Sbjct: 1873 SDAG-CIFMEENFSLKCPKH 1891
Score = 62 (26.9 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 29/92 (31%), Positives = 40/92 (43%)
Query: 172 NPNSAQPSSHTQAGGIRDCRPAQIDINQLDQLSPCSPPSFGDIKGS-DNESND-QGGELS 229
+P A S TQAG +C+P Q D + LS S S + +N SN Q LS
Sbjct: 392 SPTDAASSVDTQAG---NCKPLQKDKLPENLLSDLSLQSLTALTSQVENISNTVQQLLLS 448
Query: 230 PESYLANRSVKRGFDDRTRQEHRLSSSETAGS 261
+ +SVK RT ++H+ GS
Sbjct: 449 KAAAPQKKSVKN-LVSRTPEQHKSQHCSPEGS 479
Score = 39 (18.8 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 161 GMGENKRDGG-QNPNSAQPSSHTQAGGIRDCRP 192
G GE+ GG + P + + +Q+ R C+P
Sbjct: 1472 GGGEDSSGGGGKKPKTEELGLASQSPEGRPCQP 1504
>DICTYBASE|DDB_G0274195 [details] [associations]
symbol:DDB_G0274195 "Microcephalin" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001357 dictyBase:DDB_G0274195
Pfam:PF00533 EMBL:AAFI02000012 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 RefSeq:XP_644266.1 ProteinModelPortal:Q86KB4
EnsemblProtists:DDB0167567 GeneID:8619694 KEGG:ddi:DDB_G0274195
eggNOG:NOG268861 InParanoid:Q86KB4 OMA:IELASIC
ProtClustDB:CLSZ2846894 Uniprot:Q86KB4
Length = 727
Score = 147 (56.8 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 51/160 (31%), Positives = 76/160 (47%)
Query: 493 SALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAKGSCTRTLKVLMAILNGNWVL 552
S + E+ ++ +IG+ VS K THVI D+K RTLK L+ + G WVL
Sbjct: 544 SGFNDSERSSIIESMGVIGLTVSDDPK-ECTHVIM-NDSKN---RTLKFLLGVSKGVWVL 598
Query: 553 KIDWIKACMEAMNPV-GEEPYEINLDNHGCEEGPKTGRLRALNKAPKLFDGLSFYFSGNF 611
K W++ + + EE +E+ D H GP RL N LF G +F+ +G
Sbjct: 599 KRSWLEESFKQQQIIDNEEDHEV--DEH---PGPNMARLSQQNGDEPLFSGKTFFLAGKA 653
Query: 612 -MLGY-KEDLQSLVITAGGTIWKSEGELLAQCRNDETAPS 649
G ++ + L+ GG I KS EL + C +E+ S
Sbjct: 654 DPSGINRKSKEELIRNLGGKICKSI-ELASICIAEESTKS 692
Score = 45 (20.9 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 17/94 (18%), Positives = 40/94 (42%)
Query: 213 DIKGSDNESNDQGGELSPESYLANRS--VKRGFDDRTRQEHRLSSSETAGSFRDSKRLKG 270
+IK S ++ E+ E + + VK+ D +E +LSSS+ + + + +
Sbjct: 331 EIKSSTSKKTPNKKEIEEEKKTSTKKIPVKKISKDDKEEETKLSSSKKKTPVKKTSKEEE 390
Query: 271 FNYGPDSVGVKSSGHSQSTVFRSESLMASKSDSE 304
D+ + S ++ V ++ ++ + E
Sbjct: 391 EEEEEDNDEEEQSSKKKTPVKKTSKIVEDDDEEE 424
>UNIPROTKB|A2AAZ6 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HOVERGEN:HBG001357
EMBL:AL662832 EMBL:AL662795 EMBL:AL773535 EMBL:BX294158
EMBL:CR759928 EMBL:BX927214 EMBL:CR759281 EMBL:BX248580
HGNC:HGNC:10065 IPI:IPI00643713 SMR:A2AAZ6 Ensembl:ENST00000428728
Ensembl:ENST00000431871 Ensembl:ENST00000440130
Ensembl:ENST00000442914 Ensembl:ENST00000447077
Ensembl:ENST00000449396 Ensembl:ENST00000450421 Uniprot:A2AAZ6
Length = 261
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
L+ L +E C +CL P+++ C H FC +CI R + + CP+C+ Y LR
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLR 79
Query: 90 PLAFLENIIAIYKGLDA 106
P L +++ I K L A
Sbjct: 80 PNRQLGSMVEIAKQLQA 96
>UNIPROTKB|A2AE51 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG001357 EMBL:AL662832 EMBL:BX927221 EMBL:CR759838
EMBL:CR788282 EMBL:BX248419 EMBL:CR388382 EMBL:BX927189
HGNC:HGNC:12962 EMBL:AL662782 EMBL:AL671855 EMBL:AL845450
IPI:IPI00790584 SMR:A2AE51 Ensembl:ENST00000415966
Ensembl:ENST00000420345 Ensembl:ENST00000424124
Ensembl:ENST00000438064 Ensembl:ENST00000444979
Ensembl:ENST00000450103 Ensembl:ENST00000451189 Uniprot:A2AE51
Length = 159
Score = 117 (46.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCI----PRSAQCESECPLCKSQCTYADL 88
L+ L E+ C +CL+ P+ + C H+FC SC P S CPLCK ++
Sbjct: 7 LRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGS-RPVCPLCKKPFKKENI 65
Query: 89 RPLAFLENII 98
RP+ LE I+
Sbjct: 66 RPVWQLEKIL 75
>MGI|MGI:1925835 [details] [associations]
symbol:Phf17 "PHD finger protein 17" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=ISO] [GO:0043981
"histone H4-K5 acetylation" evidence=ISO] [GO:0043982 "histone
H4-K8 acetylation" evidence=ISO] [GO:0043983 "histone H4-K12
acetylation" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016
SMART:SM00249 MGI:MGI:1925835 GO:GO:0005739 GO:GO:0006915
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 eggNOG:COG5141 InterPro:IPR019786 PROSITE:PS01359
GO:GO:0043966 InterPro:IPR019542 Pfam:PF10513 GO:GO:0043983
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 CTD:79960
HOGENOM:HOG000220882 HOVERGEN:HBG053585 KO:K11347 OrthoDB:EOG4BP1B2
OMA:EAHEGAC EMBL:AK129445 EMBL:AK049332 EMBL:AK147466 EMBL:BC020316
EMBL:BC026471 EMBL:BN000282 EMBL:BN000281 IPI:IPI00453799
IPI:IPI00798574 RefSeq:NP_001123656.1 RefSeq:NP_001123657.1
RefSeq:NP_001123658.1 RefSeq:NP_758507.3 UniGene:Mm.286285
ProteinModelPortal:Q6ZPI0 SMR:Q6ZPI0 IntAct:Q6ZPI0 STRING:Q6ZPI0
PhosphoSite:Q6ZPI0 PRIDE:Q6ZPI0 Ensembl:ENSMUST00000026865
Ensembl:ENSMUST00000163764 Ensembl:ENSMUST00000168086
Ensembl:ENSMUST00000170711 GeneID:269424 KEGG:mmu:269424
UCSC:uc008pcj.2 GeneTree:ENSGT00690000101689 InParanoid:Q6ZPI0
NextBio:392846 Bgee:Q6ZPI0 CleanEx:MM_PHF17 Genevestigator:Q6ZPI0
GermOnline:ENSMUSG00000025764 Uniprot:Q6ZPI0
Length = 834
Score = 143 (55.4 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 46/137 (33%), Positives = 66/137 (48%)
Query: 361 RSHVIHVHSKCIEWAPQVYYAG-DTVKNL-KAELARGSK--LKCSRCGLK-GAALGCYVR 415
RS VH C W P+V + ++ + K S+ L CS C K GA++ C V+
Sbjct: 273 RSGTKWVHVSCALWIPEVSIGSPEKMEPITKVSHIPSSRWALVCSLCNEKFGASIQCSVK 332
Query: 416 SCRRSYHVPCA----LEISE--CRWDTENFLVLCPVHSSVKFPIEKSGHRSIRNRAAPLQ 469
+CR ++HV CA LE+ D F CP HSS + P E G + + AP +
Sbjct: 333 NCRTAFHVTCAFDRGLEMKTILAENDEVKFKSYCPKHSSHRKPEEGLGEGAAQENGAP-E 391
Query: 470 LTPQEP-SFWGS-SPNK 484
+PQ P +GS PN+
Sbjct: 392 SSPQSPLEPYGSLEPNR 408
>ZFIN|ZDB-GENE-081104-417 [details] [associations]
symbol:phf11 "PHD finger protein 11" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 SMART:SM00249 ZFIN:ZDB-GENE-081104-417
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BC074029
IPI:IPI00497172 UniGene:Dr.83423 eggNOG:NOG331256 InParanoid:Q6GML5
OrthoDB:EOG4JWVGN Uniprot:Q6GML5
Length = 539
Score = 140 (54.3 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 43/139 (30%), Positives = 67/139 (48%)
Query: 329 ICGFCQSSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVY------YA- 381
IC C++S +E TG P+ +E D I H C+ ++ +Y Y
Sbjct: 21 ICALCKTSDETETTG---------PLSSKE-D----ISAHQNCLLFSSNIYCKNSPTYDD 66
Query: 382 --GDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECR----WD 435
G ++++K E RG KL+C C GA +GC ++ C RS+H PCA++ ++ R +
Sbjct: 67 LFGFDLEDVKKEQRRGQKLRCYFCNKTGATVGCEIKRCPRSFHYPCAIK-ADARAIEDFS 125
Query: 436 TENFLVLCPVHSSVKFPIE 454
T + V C H PIE
Sbjct: 126 TGTYRVYCKSHDPN--PIE 142
>UNIPROTKB|F1NE42 [details] [associations]
symbol:G2E3 "G2/M phase-specific E3 ubiquitin-protein
ligase" species:9031 "Gallus gallus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000569 InterPro:IPR001965
SMART:SM00184 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004842 SUPFAM:SSF56204
GeneTree:ENSGT00390000005246 EMBL:AADN02003353 IPI:IPI00923814
Ensembl:ENSGALT00000037872 ArrayExpress:F1NE42 Uniprot:F1NE42
Length = 476
Score = 139 (54.0 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 382 GDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWD-TENFL 440
G +++++ E+ R ++L C+ C KGA++GC C+RSYH PC L+ EC + E+F
Sbjct: 25 GFLIEDIRKEVNRAARLMCNICRKKGASIGCVAPKCKRSYHFPCGLQ-KECVFQFMEDFR 83
Query: 441 VLCPVHSSVKFPIEK 455
C H V+ +K
Sbjct: 84 SYCWEHKPVQIFSDK 98
>RGD|1304579 [details] [associations]
symbol:Trim5 "tripartite motif-containing 5" species:10116
"Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0002218 "activation of innate immune response"
evidence=ISO] [GO:0002221 "pattern recognition receptor signaling
pathway" evidence=ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008329 "pattern recognition receptor activity" evidence=ISO]
[GO:0031664 "regulation of lipopolysaccharide-mediated signaling
pathway" evidence=ISO] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISO] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISO] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISO] [GO:0070206 "protein trimerization" evidence=IEA;ISO]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
RGD:1304579 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
EMBL:CH473956 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070206
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
HOVERGEN:HBG001357 HOGENOM:HOG000234134 eggNOG:NOG310455
OrthoDB:EOG4229JJ CTD:85363 KO:K10648 EMBL:AC113720 EMBL:BC078926
IPI:IPI00475551 RefSeq:NP_001014045.1 UniGene:Rn.12117 SMR:Q6AYT1
STRING:Q6AYT1 Ensembl:ENSRNOT00000023100 GeneID:308906
KEGG:rno:308906 UCSC:RGD:1304579 InParanoid:Q6AYT1 NextBio:659774
Genevestigator:Q6AYT1 Uniprot:Q6AYT1
Length = 511
Score = 139 (54.0 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 31/99 (31%), Positives = 49/99 (49%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIP---RSAQCESE---CPLCKSQCTYA 86
+ L E+ CP+CL+L P+ C H FC +CI S++C + CP+C+ +
Sbjct: 6 VMNLKEEVTCPICLDLMVEPVSGDCGHSFCQACITLNYESSKCNQDEFICPVCRVSYLFK 65
Query: 87 DLRPLAFLENIIAIYKGLDASPSSNLLQPVYSAFGRHQE 125
+LRP + NI+ K +SP +P + RH E
Sbjct: 66 NLRPNRHVANIVQRLKEFKSSPEE---EPKVLSCARHGE 101
>UNIPROTKB|J9NXD4 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein
homolog" species:9615 "Canis lupus familiaris" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR011364 PIRSF:PIRSF001734 PRINTS:PR00493
InterPro:IPR001357 Pfam:PF00533 GO:GO:0005634 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820
GeneTree:ENSGT00440000034289 EMBL:AAEX03006439 EMBL:AAEX03006438
Ensembl:ENSCAFT00000043953 Uniprot:J9NXD4
Length = 1542
Score = 150 (57.9 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 43/164 (26%), Positives = 72/164 (43%)
Query: 473 QEPSFWGSSPNKAKEWVFCGSALSVEEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAK 532
++P S+ K S L+ +E +L+ +F + ++ THVI TDA+
Sbjct: 1345 EKPEVISSTRGVNKRISMVASGLTPKEFMLVHKFARKHHISLTNLISEETTHVIMKTDAE 1404
Query: 533 GSCTRTLKVLMAILNGNWVLKIDWIKACMEAMNPVGEEPYEINLD--NHGCEEGPKTGRL 590
C RTLK + I G WV+ W+ ++ + E +E+ D N +GPK R
Sbjct: 1405 FVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKILDEHDFEVRGDVVNGRNHQGPKRARE 1464
Query: 591 RALNKAP--KLFDGLSFYFSGNFMLGYKEDLQSLVITAGGTIWK 632
++ K+F GL G F + L+ +V G ++ K
Sbjct: 1465 SQDRESQDRKIFRGLEICCYGPFTNMPTDQLEWMVHLCGASVVK 1508
Score = 55 (24.4 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 22/74 (29%), Positives = 32/74 (43%)
Query: 335 SSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLKAELAR 394
+ R+ + T + N + +E S V V S E V G + +N++AEL R
Sbjct: 722 NERVIQSTVSTISQNNIRECASKEVGSSSVNEVVSSTNEVGSSVNEVGSSGENIQAELGR 781
Query: 395 --GSKLKCS-RCGL 405
G KL R GL
Sbjct: 782 NRGPKLNAMLRLGL 795
Score = 37 (18.1 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 213 DIKGSDNESNDQGGELSPE 231
+I SD +S+D+G EL+ E
Sbjct: 95 EILTSD-DSHDRGSELNTE 112
>UNIPROTKB|Q7Z5J4 [details] [associations]
symbol:RAI1 "Retinoic acid-induced protein 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0040015 "negative regulation of multicellular
organism growth" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001965
PROSITE:PS50016 SMART:SM00249 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 GO:GO:0006357 GO:GO:0001501
GO:GO:0040015 PROSITE:PS01359 MIM:182290 Orphanet:819 EMBL:AJ271790
EMBL:AJ271791 EMBL:AY172136 EMBL:AB058723 EMBL:BC021209
EMBL:AL133649 EMBL:AL834468 EMBL:AL834486 IPI:IPI00449923
IPI:IPI00449924 IPI:IPI00449925 IPI:IPI00449926 PIR:T43490
RefSeq:NP_109590.3 UniGene:Hs.655395 UniGene:Hs.727059
ProteinModelPortal:Q7Z5J4 IntAct:Q7Z5J4 MINT:MINT-1477867
STRING:Q7Z5J4 PhosphoSite:Q7Z5J4 DMDM:50400978 PaxDb:Q7Z5J4
PRIDE:Q7Z5J4 DNASU:10743 Ensembl:ENST00000353383 GeneID:10743
KEGG:hsa:10743 UCSC:uc002grm.3 CTD:10743 GeneCards:GC17P017525
H-InvDB:HIX0013588 HGNC:HGNC:9834 HPA:HPA023898 MIM:607642
neXtProt:NX_Q7Z5J4 Orphanet:1713 PharmGKB:PA34188 eggNOG:NOG146768
HOVERGEN:HBG056862 OrthoDB:EOG4CZBF0 PhylomeDB:Q7Z5J4 ChiTaRS:RAI1
GenomeRNAi:10743 NextBio:40793 ArrayExpress:Q7Z5J4 Bgee:Q7Z5J4
CleanEx:HS_RAI1 Genevestigator:Q7Z5J4 GermOnline:ENSG00000108557
Uniprot:Q7Z5J4
Length = 1906
Score = 139 (54.0 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 27/80 (33%), Positives = 37/80 (46%)
Query: 367 VHSKCIEWAPQVYYAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCA 426
VH C W VY + L+ + + CS C GA +GC + C +YH PCA
Sbjct: 1824 VHEACAVWTGGVYLVAGKLFGLQEAMKVAVDMMCSSCQEAGATIGCCHKGCLHTYHYPCA 1883
Query: 427 LEISECRWDTENFLVLCPVH 446
+ C + ENF + CP H
Sbjct: 1884 SDAG-CIFIEENFSLKCPKH 1902
Score = 59 (25.8 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 24/91 (26%), Positives = 38/91 (41%)
Query: 172 NPNSAQPSSHTQAGGIRDCRPAQIDINQLDQLSPCSPPSFGDIKGS-DNESNDQGGELSP 230
+P A S TQAG +C+P Q D + LS S S + +N SN L
Sbjct: 399 SPTDATSSVDTQAG---NCKPLQKDKLPENLLSDLSLQSLTALTSQVENISNTVQQLLLS 455
Query: 231 ESYLANRSVKRGFDDRTRQEHRLSSSETAGS 261
++ + + + RT ++H+ GS
Sbjct: 456 KAAVPQKKGVKNLVSRTPEQHKSQHCSPEGS 486
Score = 39 (18.8 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 32/145 (22%), Positives = 53/145 (36%)
Query: 40 LKCPLCLNLFS-RPLLLPCDHIFCNSCIPRSAQCESECPLCKSQCTYADLRPLAFLENII 98
L C LC N + + L C + C+P+ E + C A L PL E +
Sbjct: 1685 LVCCLCQNPANFKDLGDLCGPYYPEHCLPKKKPKLKEKVRPEGTCEEASL-PL---ERTL 1740
Query: 99 AIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSFNNSACDGQKGKGFE 158
+ A+ + +P A Q +S + LS +Q + CDG++ G E
Sbjct: 1741 KGPECAAAATAGKPPRPDGPADPAKQGPLRTSARGLSRR--LQSCY---CCDGREDGGEE 1795
Query: 159 LTGMGENKRDGGQNPNSAQPSSHTQ 183
+ ++ A+P Q
Sbjct: 1796 AAPADKGRKHECSKEAPAEPGGEAQ 1820
>UNIPROTKB|Q1ACD5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9490 "Saguinus oedipus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
GO:GO:0031664 EMBL:DQ229285 ProteinModelPortal:Q1ACD5 SMR:Q1ACD5
Uniprot:Q1ACD5
Length = 494
Score = 138 (53.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 30/76 (39%), Positives = 39/76 (51%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSA------QCESECPLCKSQCTYADLRPLA 92
E+ CP+CL L + PL L C H FC +CI + Q E CPLC+ +LRP
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKESTPHQGERSCPLCRMSYPSENLRPNR 71
Query: 93 FLENIIAIYKGLDASP 108
L NI+ K + SP
Sbjct: 72 HLANIVERLKEVMLSP 87
>UNIPROTKB|Q5C8U1 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:78454 "Saguinus labiatus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY740615 EMBL:AY843518
ProteinModelPortal:Q5C8U1 SMR:Q5C8U1 Uniprot:Q5C8U1
Length = 494
Score = 138 (53.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 30/76 (39%), Positives = 39/76 (51%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSA------QCESECPLCKSQCTYADLRPLA 92
E+ CP+CL L + PL L C H FC +CI + Q E CPLC+ +LRP
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKESTPHQGERSCPLCRMSYPSENLRPNR 71
Query: 93 FLENIIAIYKGLDASP 108
L NI+ K + SP
Sbjct: 72 HLANIVERLKEVMLSP 87
>UNIPROTKB|Q5D7I5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9493 "Callithrix pygmaea" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843512
ProteinModelPortal:Q5D7I5 SMR:Q5D7I5 Uniprot:Q5D7I5
Length = 494
Score = 138 (53.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 30/76 (39%), Positives = 39/76 (51%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSA------QCESECPLCKSQCTYADLRPLA 92
E+ CP+CL L + PL L C H FC +CI + Q E CPLC+ +LRP
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKESTLHQGERSCPLCRMSYPSENLRPNR 71
Query: 93 FLENIIAIYKGLDASP 108
L NI+ K + SP
Sbjct: 72 HLANIVERLKEVMLSP 87
>UNIPROTKB|C9JWN8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HOGENOM:HOG000234134 HGNC:HGNC:16276 ChiTaRS:TRIM5
EMBL:AC109341 IPI:IPI00749246 ProteinModelPortal:C9JWN8 SMR:C9JWN8
STRING:C9JWN8 Ensembl:ENST00000419850 ArrayExpress:C9JWN8
Bgee:C9JWN8 Uniprot:C9JWN8
Length = 72
Score = 114 (45.2 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQC------ESECPLCKSQCTYADLRP 90
E+ CP+CL L ++PL L C H FC +C+ + + ES CP+C+ ++RP
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRP 69
>RGD|1359377 [details] [associations]
symbol:Phf11b "PHD finger protein 11B" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001965 PROSITE:PS50016
SMART:SM00249 RGD:1359377 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 PROSITE:PS01359 EMBL:BC088253
IPI:IPI00359697 RefSeq:NP_001014257.1 UniGene:Rn.140721
GeneID:364393 KEGG:rno:364393 CTD:364393 NextBio:685312
Genevestigator:Q5I0J8 Uniprot:Q5I0J8
Length = 293
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 385 VKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALE---ISECRWDTENFLV 441
VK++K E+ RG +LKCS C KGA +GC ++SC ++YH+ CA E I + D + +
Sbjct: 78 VKSVKKEIWRGRRLKCSFCNNKGATVGCDLQSCPKNYHLHCAKEDRAILQVDEDYGTYKL 137
Query: 442 LCPVHS 447
C H+
Sbjct: 138 FCQRHA 143
>UNIPROTKB|B0V1M0 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOVERGEN:HBG001357 UniGene:Hs.493275
HGNC:HGNC:16289 eggNOG:NOG310139 OrthoDB:EOG4K0QNJ EMBL:CR925727
IPI:IPI00892854 SMR:B0V1M0 Ensembl:ENST00000422484 Uniprot:B0V1M0
Length = 248
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 29/96 (30%), Positives = 49/96 (51%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCES---ECPLCKSQCTYADLR 89
+ KL E+ CP+CL++ +P+ + C H FC CI + + +CPLCK+ +R
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAIR 66
Query: 90 PLAFLENIIAIYKGLDASPSSNLLQPVYSAFGRHQE 125
+ L N++ + L AS + + + RHQE
Sbjct: 67 FNSLLRNLVEKIQALQASEVQSKRKE--ATCPRHQE 100
>ZFIN|ZDB-GENE-110411-97 [details] [associations]
symbol:tcf20 "transcription factor 20" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 SMART:SM00249 ZFIN:ZDB-GENE-110411-97
GO:GO:0008270 GeneTree:ENSGT00530000063684 EMBL:FP325358
IPI:IPI00963286 Ensembl:ENSDART00000111739 ArrayExpress:E7FE16
Bgee:E7FE16 Uniprot:E7FE16
Length = 2354
Score = 154 (59.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 367 VHSKCIEWAPQVYYAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCA 426
VH C+ W +Y + L+ L CS C + G+ LGCY + C YH CA
Sbjct: 2257 VHESCMVWTSGIYLVNGRLYGLQEALDGARDASCSHCEMAGSTLGCYSKGCTLRYHYICA 2316
Query: 427 LEISECRWDTENFLVLCPVH 446
++ ++C + +NF + CP H
Sbjct: 2317 ID-ADCSLNEDNFSLRCPKH 2335
Score = 44 (20.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 18/87 (20%), Positives = 40/87 (45%)
Query: 95 ENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSFNNSACDGQKG 154
+ ++ K DA+P + Q +S G + + SG S +A ++ N + + +
Sbjct: 520 DTVLPQRKSRDAAPHFQMQQGSHSLPG----NQNKSGNSSTAGRILT---NEESSEMLET 572
Query: 155 KGFELTGMGENKRDGGQNPNSAQPSSH 181
KG + +++ G + N ++P S+
Sbjct: 573 KGQQKLERKRVRQESGTS-NESEPQSY 598
Score = 44 (20.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 32/116 (27%), Positives = 43/116 (37%)
Query: 169 GGQNPNSAQ--PSSHTQAGGIRDCRPAQIDINQLDQLSPCSPPSFGDIKGSDNESNDQGG 226
G NSAQ SSH A R + + + QLSP +P S I S GG
Sbjct: 394 GVSEGNSAQLQASSHPAAPNARSSQSHARLLQAVPQLSP-TPHSNSSIS-----SCGSGG 447
Query: 227 ELSPESYLANRSVKRGFDDRTRQEHRLSSSETAGSFRDSKRLKGFNYGPDSVGVKS 282
+S N S G ++R+ +G DS + PD G+ S
Sbjct: 448 --GNKSATLNHSA--GIGHANMGQNRMGPGLRSGPGEDSSLFPHDKHLPDP-GLNS 498
>MGI|MGI:98178 [details] [associations]
symbol:Trim30a "tripartite motif-containing 30A" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0032715 "negative regulation of
interleukin-6 production" evidence=IMP] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=IMP]
[GO:0034122 "negative regulation of toll-like receptor signaling
pathway" evidence=IMP] [GO:0045732 "positive regulation of protein
catabolic process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IMP] [GO:1900226 "negative regulation of NLRP3
inflammasome complex assembly" evidence=IMP] [GO:2000378 "negative
regulation of reactive oxygen species metabolic process"
evidence=IMP] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
MGI:MGI:98178 Pfam:PF00097 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 InterPro:IPR008985 SUPFAM:SSF49899
GO:GO:0032720 GO:GO:0032715 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:CH466531 GO:GO:0045732 GO:GO:2000378 InterPro:IPR017907
GO:GO:0034122 GO:GO:0051865 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
HOVERGEN:HBG001357 HOGENOM:HOG000234134 eggNOG:NOG310455
EMBL:J03776 EMBL:AF220014 EMBL:AF220015 EMBL:AF220016 EMBL:AK134144
EMBL:AK137506 EMBL:AC122400 EMBL:AC142110 EMBL:BC005447
IPI:IPI00466858 IPI:IPI00875139 PIR:A30891 RefSeq:NP_033125.2
UniGene:Mm.295578 PDB:2ECW PDBsum:2ECW ProteinModelPortal:P15533
SMR:P15533 STRING:P15533 PRIDE:P15533 Ensembl:ENSMUST00000076922
GeneID:20128 KEGG:mmu:20128 CTD:20128 InParanoid:P15533 OMA:AICLLCE
OrthoDB:EOG4229JJ EvolutionaryTrace:P15533 NextBio:297627
Bgee:P15533 CleanEx:MM_TRIM30 Genevestigator:P15533
GermOnline:ENSMUSG00000030921 GO:GO:1900226 Uniprot:P15533
Length = 496
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 26/82 (31%), Positives = 42/82 (51%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIP------RSAQCESECPLCKSQCTYA 86
L+ + E+ CP+CL L P+ C+H FC +CI R+ + CP+C+ +
Sbjct: 6 LEMIKEEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFG 65
Query: 87 DLRPLAFLENIIAIYKGLDASP 108
+LRP + NI+ KG + P
Sbjct: 66 NLRPNLHVANIVERLKGFKSIP 87
>UNIPROTKB|F1NHK8 [details] [associations]
symbol:G2E3 "G2/M phase-specific E3 ubiquitin-protein
ligase" species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] Pfam:PF00632
InterPro:IPR001841 InterPro:IPR000569 InterPro:IPR001965
SMART:SM00184 SMART:SM00249 GO:GO:0005794 GO:GO:0043066
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004842 GO:GO:0000209
IPI:IPI00585428 SUPFAM:SSF56204 GeneTree:ENSGT00390000005246
EMBL:AADN02003353 Ensembl:ENSGALT00000016113 ArrayExpress:F1NHK8
Uniprot:F1NHK8
Length = 698
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 382 GDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWD-TENFL 440
G +++++ E+ R ++L C+ C KGA++GC C+RSYH PC L+ EC + E+F
Sbjct: 18 GFLIEDIRKEVNRAARLMCNICRKKGASIGCVAPKCKRSYHFPCGLQ-KECVFQFMEDFR 76
Query: 441 VLCPVHSSVKFPIEK 455
C H V+ +K
Sbjct: 77 SYCWEHKPVQIFSDK 91
>UNIPROTKB|F1RRB5 [details] [associations]
symbol:PHF17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043983 "histone H4-K12 acetylation" evidence=IEA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IEA] [GO:0043981
"histone H4-K5 acetylation" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0000123 "histone acetyltransferase complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016 SMART:SM00249
GO:GO:0005739 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0043966 InterPro:IPR019542
Pfam:PF10513 GO:GO:0043983 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 CTD:79960 KO:K11347 OMA:EAHEGAC
GeneTree:ENSGT00690000101689 EMBL:CU929855 RefSeq:XP_003129244.1
RefSeq:XP_003357076.1 UniGene:Ssc.13322 Ensembl:ENSSSCT00000009936
GeneID:100516328 KEGG:ssc:100516328 Uniprot:F1RRB5
Length = 842
Score = 140 (54.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 41/126 (32%), Positives = 61/126 (48%)
Query: 361 RSHVIHVHSKCIEWAPQVYYAG-DTVKNL-KAELARGSK--LKCSRCGLK-GAALGCYVR 415
RS VH C W P+V + ++ + K S+ L CS C K GA++ C V+
Sbjct: 272 RSGTKWVHVSCALWIPEVSIGSPEKMEPITKVSHIPSSRWALVCSLCNEKFGASIQCSVK 331
Query: 416 SCRRSYHVPCA----LEISE--CRWDTENFLVLCPVHSSVKFPIEKSGHRSIRNRAAPLQ 469
+CR ++HV CA LE+ D F CP HSS + P E G + + AP +
Sbjct: 332 NCRTAFHVTCAFDRGLEMKTILAENDEVKFKSYCPKHSSHRKPEESLGEAATQENGAP-E 390
Query: 470 LTPQEP 475
+P++P
Sbjct: 391 CSPRDP 396
>UNIPROTKB|Q2HJ93 [details] [associations]
symbol:PHF11 "PHD finger protein 11" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 PROSITE:PS50016
SMART:SM00249 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 PROSITE:PS01359 eggNOG:NOG276632
GeneTree:ENSGT00530000063780 HOGENOM:HOG000290637 OrthoDB:EOG4QZ7M7
EMBL:BC113245 IPI:IPI00713678 RefSeq:NP_001039609.1
UniGene:Bt.43054 STRING:Q2HJ93 Ensembl:ENSBTAT00000017493
GeneID:513331 KEGG:bta:513331 CTD:51131 InParanoid:Q2HJ93
OMA:TLCSFQE NextBio:20870816 Uniprot:Q2HJ93
Length = 337
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/122 (28%), Positives = 58/122 (47%)
Query: 329 ICGFCQSSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNL 388
IC C V L++A + + E + + +C ++ P V+++
Sbjct: 44 ICALCPKDLECSV----LYFAQSENIAAHENCLLYSSAL-VECEDYDPSNNDRNFDVESV 98
Query: 389 KAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALE---ISECRWDTENFLVLCPV 445
K E+ RG KLKC+ CG KGA +GC ++SC ++YH CA + + T + V C
Sbjct: 99 KKEIKRGRKLKCTFCGKKGATVGCDLKSCFKNYHFFCAKNDHAVLQADGRTGIYKVFCQQ 158
Query: 446 HS 447
H+
Sbjct: 159 HA 160
>UNIPROTKB|Q5F4A1 [details] [associations]
symbol:G2E3 "G2/M phase-specific E3 ubiquitin-protein
ligase" species:9031 "Gallus gallus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] Pfam:PF00632 InterPro:IPR001841 InterPro:IPR000569
InterPro:IPR001965 PROSITE:PS50016 PROSITE:PS50237 SMART:SM00184
SMART:SM00249 UniPathway:UPA00143 GO:GO:0007275 GO:GO:0005737
GO:GO:0006915 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 EMBL:AJ851399
IPI:IPI00585428 RefSeq:NP_001012918.1 UniGene:Gga.15006 HSSP:Q9DAG9
ProteinModelPortal:Q5F4A1 GeneID:423305 KEGG:gga:423305 CTD:55632
eggNOG:NOG304942 HOGENOM:HOG000112684 HOVERGEN:HBG055656
OrthoDB:EOG4R23T7 NextBio:20825794 SUPFAM:SSF56204 Uniprot:Q5F4A1
Length = 742
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 382 GDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWD-TENFL 440
G +++++ E+ R ++L C+ C KGA++GC C+RSYH PC L+ EC + E+F
Sbjct: 62 GFLIEDIRKEVNRAARLMCNICRKKGASIGCVAPKCKRSYHFPCGLQ-KECVFQFMEDFR 120
Query: 441 VLCPVHSSVKFPIEK 455
C H V+ +K
Sbjct: 121 SYCWEHKPVQIFSDK 135
>UNIPROTKB|E9PBZ8 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 EMBL:AL662832 EMBL:AL773535
EMBL:BX294158 EMBL:CR759928 EMBL:BX927214 EMBL:CR759281
EMBL:BX248580 HGNC:HGNC:10065 IPI:IPI00643713 SMR:E9PBZ8
Ensembl:ENST00000546617 Ensembl:ENST00000548540
Ensembl:ENST00000549051 Ensembl:ENST00000549269
Ensembl:ENST00000550625 Ensembl:ENST00000552165 Uniprot:E9PBZ8
Length = 411
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
L+ L +E C +CL P+++ C H FC +CI R + + CP+C+ Y LR
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLR 79
Query: 90 PLAFLENIIAIYKGLDA 106
P L +++ I K L A
Sbjct: 80 PNRQLGSMVEIAKQLQA 96
>UNIPROTKB|Q5D7I2 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:43777 "Pithecia pithecia" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843515
ProteinModelPortal:Q5D7I2 SMR:Q5D7I2 Uniprot:Q5D7I2
Length = 494
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 30/82 (36%), Positives = 41/82 (50%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSA------QCESECPLCKSQCTYA 86
L + E+ CP+CL L + PL L C H FC +CI + Q E CPLC+
Sbjct: 6 LMNIKEEVTCPICLELLTEPLSLDCGHSFCQACITANHKKSMLHQGERSCPLCRISYPSE 65
Query: 87 DLRPLAFLENIIAIYKGLDASP 108
+LRP L NI+ + + SP
Sbjct: 66 NLRPNRHLANIVERLREVMLSP 87
>UNIPROTKB|F1RWB3 [details] [associations]
symbol:LOC100513415 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 EMBL:FP067415
Ensembl:ENSSSCT00000009703 OMA:CANITAF Uniprot:F1RWB3
Length = 434
Score = 135 (52.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 32/88 (36%), Positives = 46/88 (52%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRS-AQCESE--CPLCKSQCTYADLR 89
L L E KCP+CL+ P+ + C H FC CI RS A+ E CP+C+ C +R
Sbjct: 7 LAGLQAEAKCPICLDSLHDPVTIQCGHNFCRRCIQRSWAELEDTFPCPMCRHPCLEPHVR 66
Query: 90 PLAFLENIIAIYKGLDASPSSNLL--QP 115
L +I + + L +S SS+ + QP
Sbjct: 67 SNTQLGRMIEVARLLHSSRSSSKMSQQP 94
>UNIPROTKB|E7EQQ5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HGNC:HGNC:16276 ChiTaRS:TRIM5 EMBL:AC109341
IPI:IPI00879744 ProteinModelPortal:E7EQQ5 SMR:E7EQQ5
Ensembl:ENST00000412903 ArrayExpress:E7EQQ5 Bgee:E7EQQ5
Uniprot:E7EQQ5
Length = 209
Score = 127 (49.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQC------ESECPLCKSQCTYADLRPLA 92
E+ CP+CL L ++PL L C H FC +C+ + + ES CP+C+ ++RP
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPNR 71
Query: 93 FLENIIAIYKGLDASP 108
+ NI+ + + SP
Sbjct: 72 HVANIVEKLREVKLSP 87
>ZFIN|ZDB-GENE-030131-5997 [details] [associations]
symbol:rnf146 "ring finger protein 146"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=ISS] [GO:0070936
"protein K48-linked ubiquitination" evidence=ISS] [GO:0090263
"positive regulation of canonical Wnt receptor signaling pathway"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS] [GO:0072572
"poly-ADP-D-ribose binding" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5997 GO:GO:0005829 GO:GO:0005634 GO:GO:0016055
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0090263 InterPro:IPR017907 GO:GO:0070936
GO:GO:0042787 GO:GO:0051865 InterPro:IPR004170 Pfam:PF02825
PROSITE:PS50918 GO:GO:0072572 eggNOG:NOG298024 HOGENOM:HOG000128547
HOVERGEN:HBG057514 KO:K15700 OrthoDB:EOG4F7NM2 EMBL:CR354556
EMBL:BC048897 IPI:IPI00492580 RefSeq:NP_956148.1 UniGene:Dr.77387
ProteinModelPortal:Q7ZUK0 SMR:Q7ZUK0 GeneID:334065 KEGG:dre:334065
CTD:81847 InParanoid:Q7ZUK0 NextBio:20810253 ArrayExpress:Q7ZUK0
Uniprot:Q7ZUK0
Length = 364
Score = 102 (41.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 41 KCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESECPLCKSQ 82
+CP+CL P+ LPC HIFC C+ ++ C LC+ +
Sbjct: 41 ECPICLQSCVHPVRLPCRHIFCFLCVKGASWHSKRCALCRRE 82
Score = 77 (32.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 38/161 (23%), Positives = 63/161 (39%)
Query: 125 EDNSSSGQSLSANTLVQVSFNNSACDGQKGKGFELTGMGENKRDGGQNPNSAQPSSHTQA 184
+ NSS+G ++ A +V VS + +A + + TG+ + G P +P T
Sbjct: 196 DPNSSAG-AVPAPAVVDVSVDGAAAERESSADGADTGVSGGRPQGTFVPAPIRPP--TIL 252
Query: 185 GGIRDCRPAQIDINQLDQLSPCS-PPSFGDIKGSDNESNDQGGELSPESYLANRSVKRGF 243
GG + DI + L+ + P+ + + D E D Y +
Sbjct: 253 GGHLTSPASSSDIQLVQTLAQLNISPNEQEPEEEDAEDEDDSAAPDASGYDSESGTS--- 309
Query: 244 DDRTRQEHRLSSSETAGSFRDSKRLKGFNYGPDSVGVKSSG 284
DD + E + T GS + RL+ N P G +SG
Sbjct: 310 DDDEQVEDEDENEHTDGS-QGKHRLQQLNRPPPGGGPANSG 349
>MGI|MGI:1918441 [details] [associations]
symbol:Phf11a "PHD finger protein 11A" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] PROSITE:PS50016
MGI:MGI:1918441 GO:GO:0005634 GO:GO:0046872 EMBL:CH466535
PROSITE:PS01359 eggNOG:NOG276632 GeneTree:ENSGT00530000063780
HOGENOM:HOG000290637 OrthoDB:EOG4QZ7M7 EMBL:EU155109 EMBL:AK077176
EMBL:BC116758 EMBL:BC116760 IPI:IPI00225928 RefSeq:NP_766191.1
UniGene:Mm.254918 ProteinModelPortal:Q8BVM9 IntAct:Q8BVM9
STRING:Q8BVM9 PRIDE:Q8BVM9 Ensembl:ENSMUST00000062307 GeneID:219131
KEGG:mmu:219131 UCSC:uc011zmk.1 CTD:219131 InParanoid:Q8BVM9
OMA:SANIVAH NextBio:376581 Bgee:Q8BVM9 Genevestigator:Q8BVM9
Uniprot:Q8BVM9
Length = 293
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 385 VKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALE---ISECRWDTENFLV 441
VK++K E+ RG +LKCS C KGA +G ++SC ++YH+ CA+E I + D + +
Sbjct: 78 VKSVKKEIGRGRRLKCSFCKNKGATMGYDLQSCTKNYHLSCAMEDHAILQVDEDHGTYKL 137
Query: 442 LCPVHS 447
C H+
Sbjct: 138 FCQKHA 143
>UNIPROTKB|Q5D7H8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:230833 "Callicebus donacophilus" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0002218 "activation of
innate immune response" evidence=ISS] [GO:0002221 "pattern
recognition receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843519
ProteinModelPortal:Q5D7H8 SMR:Q5D7H8 Uniprot:Q5D7H8
Length = 494
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 34/93 (36%), Positives = 44/93 (47%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSA------QCESECPLCKSQCTYADLRPLA 92
E+ CP+CL L + PL L C H FC +CI + Q E CPLC+ +LRP
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKESTLHQGERSCPLCRISYPSENLRPNR 71
Query: 93 FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQE 125
L NI+ + + SP Q V RH E
Sbjct: 72 HLANIVERLREVVLSPEEG--QKV-DLCARHGE 101
>UNIPROTKB|I3LHA2 [details] [associations]
symbol:I3LHA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008168 "methyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR003888 InterPro:IPR003889 Pfam:PF05964 Pfam:PF05965
PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543 SMART:SM00317
SMART:SM00541 SMART:SM00542 GO:GO:0005634 GO:GO:0008168
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00690000101661 EMBL:CU928751
Ensembl:ENSSSCT00000026487 OMA:GGFCSED Uniprot:I3LHA2
Length = 1518
Score = 140 (54.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 30/82 (36%), Positives = 45/82 (54%)
Query: 367 VHSKCIEWAPQVY--YAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVP 424
VH C W+ +VY AG + N++ L RG ++KC C GA GC+ C SYH
Sbjct: 1039 VHLNCALWSTEVYETQAGALI-NVELALRRGLQMKCVFCHKMGATSGCHRFRCTNSYHFT 1097
Query: 425 CALEISECRWDTENFLVLCPVH 446
CA++ ++C + + LCP+H
Sbjct: 1098 CAVK-AQCMFFRDK-TTLCPMH 1117
Score = 52 (23.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 35/131 (26%), Positives = 52/131 (39%)
Query: 69 SAQCESECPLCKSQCTYADLRPLAFLENIIAIYKGLDAS-PSSNLLQPVYSAFGRHQEDN 127
S++ E + C + C + A +N + K AS P S + +P AF HQ
Sbjct: 839 SSRVEKDIVFCSNNC-FVLYSSAAQAKNSES--KDCMASLPQSPVREPPSRAF--HQYST 893
Query: 128 SSSGQSLSANTLVQVSFNNSACDGQKGK-----GFELTGMGENKRDGGQNPNSAQPSSHT 182
+ S +L L Q F +A FE + E K D + +P T
Sbjct: 894 NIS--TLDVRCLPQ--FQEAASPPASPPITFPPAFEAAQV-EAKPDELKVTVKLKPRLRT 948
Query: 183 QAGGIRDCRPA 193
GG+ DCRP+
Sbjct: 949 VHGGLEDCRPS 959
>UNIPROTKB|F1P646 [details] [associations]
symbol:TRIM39 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104307
OMA:KESNRCE EMBL:AAEX03008197 ProteinModelPortal:F1P646
Ensembl:ENSCAFT00000000617 Uniprot:F1P646
Length = 488
Score = 135 (52.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
L+ L +E C +CL P+++ C H FC +CI R + + CP+C+ Y LR
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLR 79
Query: 90 PLAFLENIIAIYKGLDA 106
P L +++ I K L A
Sbjct: 80 PNRQLGSMVEIAKQLQA 96
Score = 45 (20.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 451 FPIEKSGHRSIRNRAAPLQLTPQEPSFW 478
+P+ G R+ R AAPL + P P+ W
Sbjct: 462 WPLFYPGIRAGRKNAAPLTIRP--PTDW 487
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 11/40 (27%), Positives = 15/40 (37%)
Query: 343 GLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAG 382
G+ L Y G DRSH+ E ++Y G
Sbjct: 429 GIFLDYEAGTLSFYNVTDRSHIYTFTDTFTEKLWPLFYPG 468
>UNIPROTKB|F5H297 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:AL662832
EMBL:AL662795 EMBL:AL773535 EMBL:BX294158 EMBL:CR759928
EMBL:BX927214 EMBL:CR759281 EMBL:BX248580 HGNC:HGNC:10065
IPI:IPI01011847 SMR:F5H297 Ensembl:ENST00000540416
Ensembl:ENST00000546886 Ensembl:ENST00000547272
Ensembl:ENST00000547462 Ensembl:ENST00000547598
Ensembl:ENST00000552594 Ensembl:ENST00000552805 Uniprot:F5H297
Length = 488
Score = 135 (52.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
L+ L +E C +CL P+++ C H FC +CI R + + CP+C+ Y LR
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLR 79
Query: 90 PLAFLENIIAIYKGLDA 106
P L +++ I K L A
Sbjct: 80 PNRQLGSMVEIAKQLQA 96
Score = 45 (20.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 451 FPIEKSGHRSIRNRAAPLQLTPQEPSFW 478
+P+ G R+ R AAPL + P P+ W
Sbjct: 462 WPLFYPGIRAGRKNAAPLTIRP--PTDW 487
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 11/40 (27%), Positives = 15/40 (37%)
Query: 343 GLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAG 382
G+ L Y G DRSH+ E ++Y G
Sbjct: 429 GIFLDYEAGTLSFYNVTDRSHIYTFTDTFTEKLWPLFYPG 468
>UNIPROTKB|I7FTT9 [details] [associations]
symbol:TRIM39 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 CTD:56658 KO:K12015 OMA:KESNRCE
EMBL:CU498826 EMBL:AB158488 RefSeq:NP_001121951.1 UniGene:Ssc.96738
ProteinModelPortal:I7FTT9 Ensembl:ENSSSCT00000001458
Ensembl:ENSSSCT00000035503 Ensembl:ENSSSCT00000035776
GeneID:100151742 KEGG:ssc:100151742 Uniprot:I7FTT9
Length = 488
Score = 135 (52.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
L+ L +E C +CL P+++ C H FC +CI R + + CP+C+ Y LR
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLR 79
Query: 90 PLAFLENIIAIYKGLDA 106
P L +++ I K L A
Sbjct: 80 PNRQLGSMVEIAKQLQA 96
Score = 45 (20.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 451 FPIEKSGHRSIRNRAAPLQLTPQEPSFW 478
+P+ G R+ R AAPL + P P+ W
Sbjct: 462 WPLFYPGIRAGRKNAAPLTIRP--PTDW 487
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 11/40 (27%), Positives = 15/40 (37%)
Query: 343 GLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAG 382
G+ L Y G DRSH+ E ++Y G
Sbjct: 429 GIFLDYEAGTLSFYNVTDRSHIYTFTDTFTEKLWPLFYPG 468
>ZFIN|ZDB-GENE-060503-670 [details] [associations]
symbol:trim108 "tripartite motif containing 108"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060503-670 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
PRINTS:PR01407 HOGENOM:HOG000123639 HOVERGEN:HBG096489
EMBL:BC115297 IPI:IPI00759157 UniGene:Dr.81002
ProteinModelPortal:Q1RLT3 InParanoid:Q1RLT3 Uniprot:Q1RLT3
Length = 523
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 29/83 (34%), Positives = 42/83 (50%)
Query: 36 LALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCE---SECPLCKSQCTYADLRPLA 92
L+LE+KC +CL+ F+ P+ L C+H FC CI Q S CP C+ DL+
Sbjct: 34 LSLEIKCSVCLSDFTDPVTLSCEHSFCRQCITGHMQASLGPSACPECQKPYNEKDLKASR 93
Query: 93 FLENIIAIYKGLDASPSSNLLQP 115
L N+ + +G A S+ P
Sbjct: 94 LLRNMTSTVRGHLAEQKSDRSTP 116
>UNIPROTKB|F1PSB6 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005
PROSITE:PS50089 PROSITE:PS50293 SMART:SM00028 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR013105 Pfam:PF07719
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
OMA:VKLSALM GeneTree:ENSGT00440000033329 EMBL:AAEX03026821
Ensembl:ENSCAFT00000029170 Uniprot:F1PSB6
Length = 765
Score = 137 (53.3 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 30/71 (42%), Positives = 39/71 (54%)
Query: 16 ADSAANSKRSFNPLVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESE 75
AD A + S PL L + A +L+C LC+ LF P+ PC H FC C+ R ++
Sbjct: 450 ADQEARAAVSV-PLPLFVD--ASDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAK 506
Query: 76 CPLCK---SQC 83
CPLCK SQC
Sbjct: 507 CPLCKDGLSQC 517
>UNIPROTKB|A2AE50 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL662832
EMBL:AL844220 EMBL:BX927221 EMBL:CR759838 EMBL:CR788282
EMBL:BX248419 EMBL:CR388382 EMBL:BX927189 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00642517
SMR:A2AE50 Ensembl:ENST00000427612 Ensembl:ENST00000429583
Ensembl:ENST00000431641 Ensembl:ENST00000434785
Ensembl:ENST00000435387 Ensembl:ENST00000440149
Ensembl:ENST00000445457 Ensembl:ENST00000447942
HOGENOM:HOG000060139 HOVERGEN:HBG084408 Uniprot:A2AE50
Length = 122
Score = 111 (44.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCI----PRSAQCESECPLCKSQCTYADL 88
L+ L E+ C +CL+ P+ + C H+FC SC P S CPLCK ++
Sbjct: 7 LRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGS-RPVCPLCKKPFKKENI 65
Query: 89 RPLAFLENII 98
RP+ L +++
Sbjct: 66 RPVWQLASLV 75
>UNIPROTKB|I3L5N0 [details] [associations]
symbol:PHF6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 SMART:SM00249 GO:GO:0005730 GO:GO:0008270
GeneTree:ENSGT00530000063780 Ensembl:ENSSSCT00000029950 OMA:MESSSYX
Uniprot:I3L5N0
Length = 227
Score = 127 (49.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 48/212 (22%), Positives = 87/212 (41%)
Query: 275 PDSVGVKSSGHSQSTVFR--SESLMASKSDSELKSVAALASEKMPPISIDSCANNYICGF 332
P S G + T F+ SE ++ S + ++ ++ P S S CGF
Sbjct: 18 PKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPK-CGF 76
Query: 333 CQ-SSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLKAE 391
C +E G LH N K + + + + + + +K + E
Sbjct: 77 CHVGEEENEARG-KLHIFNAKKAAAHY--KCMLFSSGTVQLTTTSRAEFGDFDIKTVLQE 133
Query: 392 LARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWDTEN-----FLVLCPVH 446
+ RG ++KC+ C GA +GC +++C ++YH C ++ + ++ EN + + C H
Sbjct: 134 IKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQ-DKAKY-IENMSRGIYKLYCKNH 191
Query: 447 SSVKFPIEKSGHRSIRNRAA----PLQLTPQE 474
S E+ R ++R QLT Q+
Sbjct: 192 SGNDERDEEDEERESKSRGKVETDQQQLTQQQ 223
>UNIPROTKB|F5H899 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:AL662832
EMBL:AL773535 EMBL:BX294158 EMBL:CR759928 EMBL:BX927214
EMBL:CR759281 EMBL:BX248580 HGNC:HGNC:10065 IPI:IPI01009635
SMR:F5H899 Ensembl:ENST00000546867 Ensembl:ENST00000548680
Ensembl:ENST00000549959 Ensembl:ENST00000550063
Ensembl:ENST00000550432 Ensembl:ENST00000552047 Uniprot:F5H899
Length = 518
Score = 135 (52.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
L+ L +E C +CL P+++ C H FC +CI R + + CP+C+ Y LR
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLR 79
Query: 90 PLAFLENIIAIYKGLDA 106
P L +++ I K L A
Sbjct: 80 PNRQLGSMVEIAKQLQA 96
Score = 45 (20.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 451 FPIEKSGHRSIRNRAAPLQLTPQEPSFW 478
+P+ G R+ R AAPL + P P+ W
Sbjct: 492 WPLFYPGIRAGRKNAAPLTIRP--PTDW 517
Score = 37 (18.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 11/40 (27%), Positives = 15/40 (37%)
Query: 343 GLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAG 382
G+ L Y G DRSH+ E ++Y G
Sbjct: 459 GIFLDYEAGTLSFYNVTDRSHIYTFTDTFTEKLWPLFYPG 498
>UNIPROTKB|Q9HCM9 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IPI] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0005829 GO:GO:0005739 GO:GO:0006915
EMBL:CH471081 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 HOVERGEN:HBG001357 EMBL:AL662832 EMBL:AL662795
EMBL:AL773535 EMBL:CR759928 EMBL:BX927214 EMBL:CR759281
EMBL:AB046381 EMBL:BT007370 EMBL:AB110937 EMBL:AK292512
EMBL:AB110938 EMBL:AB202089 EMBL:BX248580 EMBL:BC007661
EMBL:BC034985 IPI:IPI00293604 IPI:IPI00873841 PIR:JC7387
RefSeq:NP_067076.2 RefSeq:NP_742013.1 UniGene:Hs.413493 PDB:2DID
PDB:2DIF PDB:2ECJ PDBsum:2DID PDBsum:2DIF PDBsum:2ECJ
ProteinModelPortal:Q9HCM9 SMR:Q9HCM9 IntAct:Q9HCM9
MINT:MINT-1433641 STRING:Q9HCM9 PhosphoSite:Q9HCM9 DMDM:56405385
PRIDE:Q9HCM9 DNASU:56658 Ensembl:ENST00000376656
Ensembl:ENST00000376659 Ensembl:ENST00000383601
Ensembl:ENST00000383602 Ensembl:ENST00000383603
Ensembl:ENST00000396547 Ensembl:ENST00000396548
Ensembl:ENST00000396551 Ensembl:ENST00000400644
Ensembl:ENST00000413715 Ensembl:ENST00000414015
Ensembl:ENST00000419790 Ensembl:ENST00000424575
Ensembl:ENST00000426469 Ensembl:ENST00000430502
Ensembl:ENST00000431272 Ensembl:ENST00000433900
Ensembl:ENST00000438076 Ensembl:ENST00000438859
Ensembl:ENST00000440117 Ensembl:ENST00000443109
Ensembl:ENST00000445206 Ensembl:ENST00000446397
Ensembl:ENST00000449318 Ensembl:ENST00000450778
Ensembl:ENST00000451132 Ensembl:ENST00000451715
Ensembl:ENST00000452705 Ensembl:ENST00000458607
Ensembl:ENST00000547030 Ensembl:ENST00000548002
Ensembl:ENST00000549841 Ensembl:ENST00000550282
Ensembl:ENST00000552337 Ensembl:ENST00000552520 GeneID:56658
KEGG:hsa:56658 UCSC:uc003npz.3 UCSC:uc010jrz.3 CTD:56658
GeneCards:GC06P030294 HGNC:HGNC:10065 MIM:605700 neXtProt:NX_Q9HCM9
PharmGKB:PA35535 eggNOG:NOG238084 InParanoid:Q9HCM9 KO:K12015
OMA:KESNRCE EvolutionaryTrace:Q9HCM9 GenomeRNAi:56658 NextBio:62129
ArrayExpress:Q9HCM9 Bgee:Q9HCM9 CleanEx:HS_TRIM39
Genevestigator:Q9HCM9 GermOnline:ENSG00000204599 Uniprot:Q9HCM9
Length = 518
Score = 135 (52.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
L+ L +E C +CL P+++ C H FC +CI R + + CP+C+ Y LR
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLR 79
Query: 90 PLAFLENIIAIYKGLDA 106
P L +++ I K L A
Sbjct: 80 PNRQLGSMVEIAKQLQA 96
Score = 45 (20.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 451 FPIEKSGHRSIRNRAAPLQLTPQEPSFW 478
+P+ G R+ R AAPL + P P+ W
Sbjct: 492 WPLFYPGIRAGRKNAAPLTIRP--PTDW 517
Score = 37 (18.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 11/40 (27%), Positives = 15/40 (37%)
Query: 343 GLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAG 382
G+ L Y G DRSH+ E ++Y G
Sbjct: 459 GIFLDYEAGTLSFYNVTDRSHIYTFTDTFTEKLWPLFYPG 498
>RGD|1305074 [details] [associations]
symbol:Trim69 "tripartite motif-containing 69" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO;ISS] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097 RGD:1305074
Prosite:PS00518 GO:GO:0005737 GO:GO:0006915 GO:GO:0046872
GO:GO:0016607 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:COG5432 HOGENOM:HOG000234133
HOVERGEN:HBG001357 HSSP:Q92021 GeneTree:ENSGT00700000104222
CTD:140691 KO:K12034 OrthoDB:EOG4KSPJQ EMBL:BC091171
IPI:IPI00555318 RefSeq:NP_001013178.1 UniGene:Rn.95375
ProteinModelPortal:Q5BK82 PRIDE:Q5BK82 Ensembl:ENSRNOT00000023209
GeneID:311373 KEGG:rno:311373 UCSC:RGD:1305074 InParanoid:Q5BK82
NextBio:663486 Genevestigator:Q5BK82 Uniprot:Q5BK82
Length = 499
Score = 134 (52.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 30/80 (37%), Positives = 41/80 (51%)
Query: 28 PLVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR--SAQC-ESECPLCKSQCT 84
P + +Q + EL CPLC + F PL+L C H FC +CI Q E+ CP CK C
Sbjct: 27 PSKVVIQDITTELHCPLCNDWFRDPLMLTCGHNFCQACIQNYWKMQAKETFCPECKMLCQ 86
Query: 85 YADLRPLAFLENIIAIYKGL 104
Y++ LE ++ K L
Sbjct: 87 YSNCTFNLVLEKLVEKIKRL 106
>UNIPROTKB|K7EMG3 [details] [associations]
symbol:RNF152 "E3 ubiquitin-protein ligase RNF152"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC105094 HGNC:HGNC:26811 EMBL:AC105183 Ensembl:ENST00000591306
Uniprot:K7EMG3
Length = 114
Score = 94 (38.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 40 LKCPLCLNLFS---RPLLLPCDHIFCNSCIP--RSAQCESECPLCK 80
L+C +C N +S RP LL C H C+ C+ R++Q + CP C+
Sbjct: 10 LECQICFNYYSPRRRPKLLDCKHTCCSVCLQQMRTSQKDVRCPWCR 55
Score = 39 (18.8 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 417 CRRSYHVPCALEISECRWDTENFLVLCPVHSSVKFPI 453
CR +P +S+ D E V+ H+S P+
Sbjct: 54 CRGVTKLPPGFSVSQLPDDPEVLAVIAIPHTSEHTPV 90
>ZFIN|ZDB-GENE-101021-4 [details] [associations]
symbol:lonrf1 "LON peptidase N-terminal domain and
ring finger 1" species:7955 "Danio rerio" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005
PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-101021-4 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
GeneTree:ENSGT00440000033329 EMBL:FP016207 EMBL:FP085387
EMBL:FP101912 IPI:IPI00998181 Ensembl:ENSDART00000109935
Bgee:F1QKK1 Uniprot:F1QKK1
Length = 605
Score = 135 (52.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESECPLCK 80
+ +CPLC+ LF P+ PC H FC +CI RS CPLCK
Sbjct: 312 DFECPLCIRLFYEPVTTPCGHTFCKNCIERSLDHNLRCPLCK 353
>UNIPROTKB|E7EQW4 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780 EMBL:AC135721
HGNC:HGNC:1100 ChiTaRS:BRCA1 IPI:IPI00947541
ProteinModelPortal:E7EQW4 SMR:E7EQW4 Ensembl:ENST00000476777
ArrayExpress:E7EQW4 Bgee:E7EQW4 Uniprot:E7EQW4
Length = 222
Score = 126 (49.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 34/120 (28%), Positives = 56/120 (46%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
+QK+ L+CP+CL L P+ CDHIFC C+ + + S+CPLCK+ T L+
Sbjct: 18 MQKI---LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 90 PLA-FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSFNNSA 148
F + + + K + A L+ S +E+NS + + + + N A
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRA 134
>UNIPROTKB|Q5D7I6 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:121123 "Alouatta sara" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 HOVERGEN:HBG001357 EMBL:AY843511
ProteinModelPortal:Q5D7I6 SMR:Q5D7I6 GO:GO:0031664 Uniprot:Q5D7I6
Length = 551
Score = 134 (52.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 33/89 (37%), Positives = 43/89 (48%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQ--CESECPLCKSQCTYADLRPLAFLEN 96
E+ CP+CL L + PL L C H FC +CI + + E CPLC+ +LRP L N
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKESRERSCPLCRVSYHSENLRPNRHLAN 71
Query: 97 IIAIYKGLDASPSSNLLQPVYSAFGRHQE 125
I + + SP Q V RH E
Sbjct: 72 IAERLREVMLSPEEG--QKV-DRCARHGE 97
>UNIPROTKB|F1N2E6 [details] [associations]
symbol:TRIM34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
EMBL:DAAA02040907 EMBL:DAAA02040908 IPI:IPI00732393
UniGene:Bt.43398 ProteinModelPortal:F1N2E6
Ensembl:ENSBTAT00000007366 ArrayExpress:F1N2E6 Uniprot:F1N2E6
Length = 488
Score = 133 (51.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 30 VLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR-----SAQCESECPLCKSQCT 84
V++LQ+ E+ CP+C L + PL L C H FC +CI S +S CP+C +Q +
Sbjct: 6 VMNLQE---EVSCPICRELLTEPLSLGCGHSFCQTCITNKETDISLGGDSSCPVCGTQYS 62
Query: 85 YADLRPLAFLENIIAIYKGLDASP 108
+L P L NI+ + + SP
Sbjct: 63 LGNLWPNLHLANIVERLRKVKLSP 86
>UNIPROTKB|J3KR57 [details] [associations]
symbol:PHF11 "PHD finger protein 11" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 SMART:SM00249 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL139321 HGNC:HGNC:17024 ChiTaRS:PHF11
ProteinModelPortal:J3KR57 Ensembl:ENST00000465045 Uniprot:J3KR57
Length = 226
Score = 126 (49.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 385 VKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALE---ISECRWDTENFLV 441
V+++K E+ RG KLKC C +GA +GC +++C ++YH CA + + + + +
Sbjct: 56 VESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKL 115
Query: 442 LCPVHSSVKFPI-----EKSGHRSIRNRAAPLQLTPQEP 475
LC H+ +FPI + SG + R R PL +P
Sbjct: 116 LCQQHA--QFPIIAQSAKFSGVKRKRGRKKPLSGNHVQP 152
>UNIPROTKB|Q6IE81 [details] [associations]
symbol:PHF17 "Protein Jade-1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0030308 "negative regulation of cell growth"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0006950 "response to stress" evidence=NAS] [GO:0000123 "histone
acetyltransferase complex" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0043984 "histone H4-K16 acetylation"
evidence=IDA] [GO:0043982 "histone H4-K8 acetylation" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043983
"histone H4-K12 acetylation" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016 SMART:SM00249
GO:GO:0005739 GO:GO:0006915 GO:GO:0006950 GO:GO:0030308
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
EMBL:CH471056 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0043966 InterPro:IPR019542
Pfam:PF10513 GO:GO:0043983 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 CTD:79960 HOVERGEN:HBG053585 KO:K11347
OrthoDB:EOG4BP1B2 EMBL:AF520952 EMBL:AK027620 EMBL:AK026132
EMBL:AK074986 EMBL:AK127326 EMBL:AC108024 EMBL:AC093783
EMBL:BC032376 EMBL:AB058710 EMBL:BN000287 IPI:IPI00395424
IPI:IPI00399252 IPI:IPI00789745 RefSeq:NP_079176.2
RefSeq:NP_955352.1 UniGene:Hs.12420 ProteinModelPortal:Q6IE81
SMR:Q6IE81 IntAct:Q6IE81 MINT:MINT-2876566 STRING:Q6IE81
PhosphoSite:Q6IE81 DMDM:74748786 PaxDb:Q6IE81 PRIDE:Q6IE81
DNASU:79960 Ensembl:ENST00000226319 Ensembl:ENST00000413543
Ensembl:ENST00000452328 Ensembl:ENST00000511647
Ensembl:ENST00000512960 GeneID:79960 KEGG:hsa:79960 UCSC:uc003igj.3
UCSC:uc003igk.3 UCSC:uc003igl.3 GeneCards:GC04P129730
H-InvDB:HIX0004498 HGNC:HGNC:30027 HPA:HPA020016 MIM:610514
neXtProt:NX_Q6IE81 PharmGKB:PA134925124 InParanoid:Q6IE81
OMA:EAHEGAC ChiTaRS:PHF17 GenomeRNAi:79960 NextBio:69955
ArrayExpress:Q6IE81 Bgee:Q6IE81 CleanEx:HS_PHF17
Genevestigator:Q6IE81 GermOnline:ENSG00000077684 Uniprot:Q6IE81
Length = 842
Score = 136 (52.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 41/126 (32%), Positives = 60/126 (47%)
Query: 361 RSHVIHVHSKCIEWAPQVYYAG-DTVKNL-KAELARGSK--LKCSRCGLK-GAALGCYVR 415
RS VH C W P+V + ++ + K S+ L CS C K GA++ C V+
Sbjct: 272 RSGTKWVHVSCALWIPEVSIGSPEKMEPITKVSHIPSSRWALVCSLCNEKFGASIQCSVK 331
Query: 416 SCRRSYHVPCA----LEISE--CRWDTENFLVLCPVHSSVKFPIEKSGHRSIRNRAAPLQ 469
+CR ++HV CA LE+ D F CP HSS + P E G + + AP +
Sbjct: 332 NCRTAFHVTCAFDRGLEMKTILAENDEVKFKSYCPKHSSHRKPEESLGKGAAQENGAP-E 390
Query: 470 LTPQEP 475
+P+ P
Sbjct: 391 CSPRNP 396
>DICTYBASE|DDB_G0278935 [details] [associations]
symbol:rad18 "C3HC4-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR003034
Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800 SMART:SM00513
dictyBase:DDB_G0278935 Prosite:PS00518 GenomeReviews:CM000152_GR
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 EMBL:AAFI02000024
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0008094 KO:K10695 RefSeq:XP_641970.2
ProteinModelPortal:Q54XR0 EnsemblProtists:DDB0304878 GeneID:8621702
KEGG:ddi:DDB_G0278935 eggNOG:NOG328594 InParanoid:Q54XR0
OMA:IHANECL Uniprot:Q54XR0
Length = 668
Score = 125 (49.1 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 40 LKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQCESECPLCKSQCTYADLRPLAFLENII 98
LKCP+C + F+ +++P C H +C+ CI +S + CP C+ C L L+ I+
Sbjct: 17 LKCPICYDFFNTAMMIPKCSHNYCSFCIRQSLSFKEFCPSCRISCNATQLVNNRQLDLIV 76
Query: 99 AIYKGL 104
YK L
Sbjct: 77 QNYKSL 82
Score = 54 (24.1 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 19/83 (22%), Positives = 32/83 (38%)
Query: 96 NIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVS-FN---NSACDG 151
NI + Y D +P+S P S+F + + +A ++ V FN N D
Sbjct: 338 NITSSYSENDITPTSTQSPPKSSSFSSTKSPSKEQKVVSNAKLIIDVDEFNDNNNIILDK 397
Query: 152 QKGKGFELTGMGENKRDGGQNPN 174
+ + E+ N + N N
Sbjct: 398 KDVEKLEINNNNNNNNNNNDNNN 420
Score = 45 (20.9 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 20/96 (20%), Positives = 39/96 (40%)
Query: 217 SDNESNDQGGELSPESYLANRSV-----KRGFDDRTRQEHRLSSSETAGSFRDSKRLKGF 271
++N +N+ G + +SYL + K+ D T+ + + TA R + + +
Sbjct: 491 NNNNNNNNNGNTTNKSYLPKMAYSLMNSKQLKDSLTKLGLKTNGDRTALIKRHKEYITRY 550
Query: 272 NYGPDSVGVKSSGHSQSTVFRSESLMASKSDSELKS 307
N DS+ K S +++ E + E S
Sbjct: 551 NSEVDSLSPKPIFDITSELYQLEKEREKEKQKEKSS 586
Score = 43 (20.2 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 18/106 (16%), Positives = 37/106 (34%)
Query: 123 HQEDNSSSGQSLSANTLVQVSFNNSACDGQKGKGFELTGMGENKRDGGQNPNSAQPSSHT 182
+ +N+++ + + N + NN+ + N + N N+ +++T
Sbjct: 267 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT 326
Query: 183 QAGGIRDCRPAQIDI----NQLDQLSPCSPPSFGDIKGSDNESNDQ 224
A I I N + S SPP + + S +Q
Sbjct: 327 NASNIEIQNTFNITSSYSENDITPTSTQSPPKSSSFSSTKSPSKEQ 372
>UNIPROTKB|E2R7S2 [details] [associations]
symbol:PHF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 SMART:SM00249 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00530000063780 EMBL:AAEX03026926
Ensembl:ENSCAFT00000029944 NextBio:20898388 Uniprot:E2R7S2
Length = 343
Score = 130 (50.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 30/97 (30%), Positives = 48/97 (49%)
Query: 382 GDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCAL-EISECRWDTEN-- 438
G ++++++ E+ RG+KL CS C GA +GC V++C R+YH CAL + ++ R
Sbjct: 42 GFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGI 101
Query: 439 FLVLCPVHSSVKFPIEKSGHRSIRNRAAPLQLTPQEP 475
++V C H E S +L P P
Sbjct: 102 YMVYCRKHKKTAHNSEADLEESFNEH----ELEPASP 134
Score = 127 (49.8 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 48/212 (22%), Positives = 87/212 (41%)
Query: 275 PDSVGVKSSGHSQSTVFR--SESLMASKSDSELKSVAALASEKMPPISIDSCANNYICGF 332
P S G + T F+ SE ++ S + ++ ++ P S S CGF
Sbjct: 134 PKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPK-CGF 192
Query: 333 CQ-SSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLKAE 391
C +E G LH N K + + + + + + +K + E
Sbjct: 193 CHVGEEENEARG-KLHIFNAKKAAAHY--KCMLFSSGTVQLTTTSRAEFGDFDIKTVLQE 249
Query: 392 LARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWDTEN-----FLVLCPVH 446
+ RG ++KC+ C GA +GC +++C ++YH C ++ + ++ EN + + C H
Sbjct: 250 IKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQ-DKAKY-IENMSRGIYKLYCKNH 307
Query: 447 SSVKFPIEKSGHRSIRNRAA----PLQLTPQE 474
S E+ R ++R QLT Q+
Sbjct: 308 SGNDERDEEDEERESKSRGKVEIDQQQLTQQQ 339
>UNIPROTKB|A6NI17 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX088647 HOGENOM:HOG000234133 EMBL:BX005441
EMBL:CR759838 HGNC:HGNC:16289 eggNOG:NOG310139 HOVERGEN:HBG083771
EMBL:BX897730 EMBL:CR759801 EMBL:CT009552 IPI:IPI00744105
SMR:A6NI17 Ensembl:ENST00000546863 Ensembl:ENST00000550119
Ensembl:ENST00000550679 Uniprot:A6NI17
Length = 425
Score = 131 (51.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 29/96 (30%), Positives = 49/96 (51%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCES---ECPLCKSQCTYADLR 89
+ KL E+ CP+CL++ +P+ + C H FC CI + + +CPLCK+ +R
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAIR 66
Query: 90 PLAFLENIIAIYKGLDASPSSNLLQPVYSAFGRHQE 125
+ L N++ + L AS + + + RHQE
Sbjct: 67 FNSLLRNLVEKIQALQASEVQSKRKE--ATCPRHQE 100
>UNIPROTKB|C9JJD5 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX322644 HGNC:HGNC:16289 eggNOG:NOG310139
IPI:IPI01022309 ProteinModelPortal:C9JJD5 SMR:C9JJD5
Ensembl:ENST00000550348 Uniprot:C9JJD5
Length = 425
Score = 131 (51.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 29/96 (30%), Positives = 49/96 (51%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCES---ECPLCKSQCTYADLR 89
+ KL E+ CP+CL++ +P+ + C H FC CI + + +CPLCK+ +R
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAIR 66
Query: 90 PLAFLENIIAIYKGLDASPSSNLLQPVYSAFGRHQE 125
+ L N++ + L AS + + + RHQE
Sbjct: 67 FNSLLRNLVEKIQALQASEVQSKRKE--ATCPRHQE 100
>UNIPROTKB|E7ETS6 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CR753815 HGNC:HGNC:16289 IPI:IPI01021215
ProteinModelPortal:E7ETS6 SMR:E7ETS6 Ensembl:ENST00000552122
ArrayExpress:E7ETS6 Uniprot:E7ETS6
Length = 425
Score = 131 (51.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 29/96 (30%), Positives = 49/96 (51%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCES---ECPLCKSQCTYADLR 89
+ KL E+ CP+CL++ +P+ + C H FC CI + + +CPLCK+ +R
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAIR 66
Query: 90 PLAFLENIIAIYKGLDASPSSNLLQPVYSAFGRHQE 125
+ L N++ + L AS + + + RHQE
Sbjct: 67 FNSLLRNLVEKIQALQASEVQSKRKE--ATCPRHQE 100
>UNIPROTKB|F8W1J7 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL671859 HGNC:HGNC:16289 IPI:IPI01021230
ProteinModelPortal:F8W1J7 SMR:F8W1J7 Ensembl:ENST00000550336
Uniprot:F8W1J7
Length = 425
Score = 131 (51.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 29/96 (30%), Positives = 49/96 (51%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCES---ECPLCKSQCTYADLR 89
+ KL E+ CP+CL++ +P+ + C H FC CI + + +CPLCK+ +R
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAIR 66
Query: 90 PLAFLENIIAIYKGLDASPSSNLLQPVYSAFGRHQE 125
+ L N++ + L AS + + + RHQE
Sbjct: 67 FNSLLRNLVEKIQALQASEVQSKRKE--ATCPRHQE 100
>UNIPROTKB|G8JLN1 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL671859 HGNC:HGNC:16289 SMR:G8JLN1
Ensembl:ENST00000455349 Ensembl:ENST00000552059 Uniprot:G8JLN1
Length = 425
Score = 131 (51.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 29/96 (30%), Positives = 49/96 (51%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCES---ECPLCKSQCTYADLR 89
+ KL E+ CP+CL++ +P+ + C H FC CI + + +CPLCK+ +R
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAIR 66
Query: 90 PLAFLENIIAIYKGLDASPSSNLLQPVYSAFGRHQE 125
+ L N++ + L AS + + + RHQE
Sbjct: 67 FNSLLRNLVEKIQALQASEVQSKRKE--ATCPRHQE 100
>UNIPROTKB|Q9BZY9 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR020457 Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005739 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL669914 EMBL:AL671859 EMBL:CR753815
EMBL:AF230386 EMBL:AF230387 EMBL:BT006675 EMBL:AK222729
EMBL:BX322644 EMBL:BC016866 EMBL:BC017017 EMBL:Y07828
IPI:IPI00292397 IPI:IPI00292398 RefSeq:NP_008959.3
UniGene:Hs.493275 PDB:2YSJ PDB:2YSL PDBsum:2YSJ PDBsum:2YSL
ProteinModelPortal:Q9BZY9 SMR:Q9BZY9 IntAct:Q9BZY9 STRING:Q9BZY9
DMDM:68068082 PRIDE:Q9BZY9 DNASU:11074 Ensembl:ENST00000357569
Ensembl:ENST00000376734 Ensembl:ENST00000433864
Ensembl:ENST00000445679 Ensembl:ENST00000449412
Ensembl:ENST00000453266 Ensembl:ENST00000540829
Ensembl:ENST00000547935 Ensembl:ENST00000550451
Ensembl:ENST00000551027 Ensembl:ENST00000552274
Ensembl:ENST00000552311 GeneID:11074 KEGG:hsa:11074 UCSC:uc003npg.1
CTD:11074 GeneCards:GC06M030073 H-InvDB:HIX0005686
H-InvDB:HIX0166392 HGNC:HGNC:16289 HPA:HPA046400 MIM:609316
neXtProt:NX_Q9BZY9 PharmGKB:PA38117 eggNOG:NOG310139
HOVERGEN:HBG083771 KO:K12011 OMA:EFQFLNP OrthoDB:EOG4K0QNJ
EvolutionaryTrace:Q9BZY9 GenomeRNAi:11074 NextBio:42098
ArrayExpress:Q9BZY9 Bgee:Q9BZY9 Genevestigator:Q9BZY9
GermOnline:ENSG00000204616 Uniprot:Q9BZY9
Length = 425
Score = 131 (51.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 29/96 (30%), Positives = 49/96 (51%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCES---ECPLCKSQCTYADLR 89
+ KL E+ CP+CL++ +P+ + C H FC CI + + +CPLCK+ +R
Sbjct: 7 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAIR 66
Query: 90 PLAFLENIIAIYKGLDASPSSNLLQPVYSAFGRHQE 125
+ L N++ + L AS + + + RHQE
Sbjct: 67 FNSLLRNLVEKIQALQASEVQSKRKE--ATCPRHQE 100
>ZFIN|ZDB-GENE-030616-400 [details] [associations]
symbol:g2e3 "G2/M-phase specific E3 ubiquitin
ligase" species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001965 PROSITE:PS50237 SMART:SM00249
ZFIN:ZDB-GENE-030616-400 GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004842 CTD:55632 HOVERGEN:HBG055656
SUPFAM:SSF56204 GeneTree:ENSGT00390000005246 OMA:WEQNWEC
EMBL:BX324186 EMBL:AL596026 EMBL:AL592306 IPI:IPI00490491
RefSeq:NP_001003822.1 UniGene:Dr.48567 Ensembl:ENSDART00000001444
GeneID:368848 KEGG:dre:368848 InParanoid:Q8AW58 NextBio:20813225
Uniprot:Q8AW58
Length = 706
Score = 134 (52.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 33/107 (30%), Positives = 51/107 (47%)
Query: 350 NGKPVVGEEAD-RSHVIHVHSKCIEWAPQVYYAGDT--------VKNLKAELARGSKLKC 400
N K GE+ H + VH C+ + + G+ V ++K E+ R S+L+C
Sbjct: 28 NNKEKYGEKVHLEQHNLAVHFFCLLMSSGICQRGEEDEDVYGFLVGDIKKEIRRSSRLRC 87
Query: 401 SRCGLKGAALGCYVRSCRRSYHVPCALEISECRWDTENFLVLCPVHS 447
C GA++GC ++SCR+ H+PC LE T F C H+
Sbjct: 88 FHCKKAGASVGCSIKSCRQMVHMPCGLEQEFVFQFTGLFPSFCKKHA 134
>UNIPROTKB|Q86WT6 [details] [associations]
symbol:TRIM69 "E3 ubiquitin-protein ligase TRIM69"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003877
Pfam:PF00622 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00518 GO:GO:0005737 GO:GO:0006915
GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG001357 HSSP:Q92021
EMBL:AF302088 EMBL:AF302089 EMBL:DQ232883 EMBL:AY305385
EMBL:AC122108 EMBL:BC024199 EMBL:BC033314 EMBL:BC047945
IPI:IPI00412458 IPI:IPI00418445 IPI:IPI00791890 IPI:IPI00929505
RefSeq:NP_542783.2 RefSeq:NP_892030.3 UniGene:Hs.489254
UniGene:Hs.733913 ProteinModelPortal:Q86WT6 SMR:Q86WT6
IntAct:Q86WT6 MINT:MINT-1465642 STRING:Q86WT6 PhosphoSite:Q86WT6
DMDM:229462760 PaxDb:Q86WT6 PRIDE:Q86WT6 DNASU:140691
Ensembl:ENST00000329464 Ensembl:ENST00000338264
Ensembl:ENST00000558173 Ensembl:ENST00000558329
Ensembl:ENST00000559390 Ensembl:ENST00000560442 GeneID:140691
KEGG:hsa:140691 UCSC:uc001zuf.2 UCSC:uc001zuh.1 UCSC:uc010bdy.1
CTD:140691 GeneCards:GC15P045025 HGNC:HGNC:17857 HPA:HPA028894
neXtProt:NX_Q86WT6 PharmGKB:PA162407010 eggNOG:NOG296667 KO:K12034
OMA:IAAHKEN PhylomeDB:Q86WT6 GenomeRNAi:140691 NextBio:84243
Bgee:Q86WT6 CleanEx:HS_TRIM69 Genevestigator:Q86WT6 Uniprot:Q86WT6
Length = 500
Score = 132 (51.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 29/80 (36%), Positives = 41/80 (51%)
Query: 28 PLVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIP---RSAQCESECPLCKSQCT 84
P + +Q + +EL CPLC + F PL+L C H FC +CI R E+ CP CK C
Sbjct: 27 PSKVVIQDITMELHCPLCNDWFRDPLMLSCGHNFCEACIQDFWRLQAKETFCPECKMLCQ 86
Query: 85 YADLRPLAFLENIIAIYKGL 104
Y + L+ ++ K L
Sbjct: 87 YNNCTFNPVLDKLVEKIKKL 106
>UNIPROTKB|H9KYY7 [details] [associations]
symbol:H9KYY7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104271 EMBL:AADN02066798
Ensembl:ENSGALT00000001598 OMA:CLEKPQP Uniprot:H9KYY7
Length = 205
Score = 123 (48.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 32/89 (35%), Positives = 44/89 (49%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIP---RSAQCES---ECPLCKS-QCTY 85
L+ L EL C +CL+++ P+ L C H FC CI RS C CPLC + +
Sbjct: 7 LEGLEEELTCSVCLDIYRNPVSLGCGHSFCEECIQGVLRSQHCPQGLFSCPLCSALEAPP 66
Query: 86 ADLRPLAFLENIIAIYKGLDASPSSNLLQ 114
L+P L +I+ K LD S S L+
Sbjct: 67 TKLQPNIQLRSIVQ--KFLDTSEQSAALE 93
>UNIPROTKB|F8VSP7 [details] [associations]
symbol:RNF41 "E3 ubiquitin-protein ligase NRDP1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031386 "protein tag" evidence=IEA] [GO:0005128
"erythropoietin receptor binding" evidence=IEA] [GO:0005135
"interleukin-3 receptor binding" evidence=IEA] [GO:0045619
"regulation of lymphocyte differentiation" evidence=IEA]
[GO:0045637 "regulation of myeloid cell differentiation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR015036
Pfam:PF08941 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0031386
SUPFAM:SSF49599 Gene3D:3.90.890.10 EMBL:AC073896 HGNC:HGNC:18401
IPI:IPI01021772 ProteinModelPortal:F8VSP7 SMR:F8VSP7
Ensembl:ENST00000549038 ArrayExpress:F8VSP7 Bgee:F8VSP7
Uniprot:F8VSP7
Length = 190
Score = 121 (47.7 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 39 ELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQCESECPLCKSQCTYADLRPLA-FLEN 96
+L CP+C + P+ P C+H FCN+CI + + CP+ +S T A LRP+ + N
Sbjct: 15 DLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHLRPVPRIMRN 74
Query: 97 IIA 99
+++
Sbjct: 75 MLS 77
>UNIPROTKB|K7GLC7 [details] [associations]
symbol:LOC100738479 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR000679 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50114 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101646 EMBL:CU856599
Ensembl:ENSSSCT00000034639 Uniprot:K7GLC7
Length = 487
Score = 131 (51.2 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQ-------CESECPLCKSQCTYADLRPL 91
E+ CPLCL L + PL + C H FC +CI ++++ ES CP+C+++ +LRP
Sbjct: 12 EVTCPLCLELLTDPLSIDCGHSFCQACITQNSEEWRMDQGGESSCPVCQTRYRPGNLRPN 71
Query: 92 AFLENI 97
L NI
Sbjct: 72 RHLANI 77
>UNIPROTKB|Q9C030 [details] [associations]
symbol:TRIM6 "Tripartite motif-containing protein 6"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0070206 "protein
trimerization" evidence=IDA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 EMBL:CH471064 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070206 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOVERGEN:HBG001357 HOGENOM:HOG000234134 OrthoDB:EOG4229JJ
eggNOG:NOG259921 KO:K11999 EMBL:AB039903 UniGene:Hs.729048
GermOnline:ENSG00000121236 EMBL:AF220030 EMBL:AK027664
EMBL:AK290172 EMBL:BC047564 IPI:IPI00552150 IPI:IPI00940053
RefSeq:NP_001003818.1 RefSeq:NP_001185573.1 RefSeq:NP_001185574.1
RefSeq:NP_477514.1 ProteinModelPortal:Q9C030 SMR:Q9C030
STRING:Q9C030 PhosphoSite:Q9C030 DMDM:25009488 PaxDb:Q9C030
PRIDE:Q9C030 Ensembl:ENST00000278302 Ensembl:ENST00000380097
GeneID:117854 KEGG:hsa:117854 UCSC:uc001mbc.2 UCSC:uc001mbd.3
CTD:117854 GeneCards:GC11P005617 HGNC:HGNC:16277 MIM:607564
neXtProt:NX_Q9C030 PharmGKB:PA38110 OMA:CNCVIPM ChiTaRS:TRIM6
GenomeRNAi:117854 NextBio:80243 ArrayExpress:Q9C030 Bgee:Q9C030
Genevestigator:Q9C030 Uniprot:Q9C030
Length = 488
Score = 131 (51.2 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 27 NPLVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCI-PRSAQC------ESECPLC 79
+P+++ +++ E+ CP+CL L + PL + C H FC +CI P + E CP+C
Sbjct: 3 SPVLVDIRE---EVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVC 59
Query: 80 KSQCTYADLRPLAFLENIIAIYKGLDASPSSNL 112
++ +LRP L NI+ + + P L
Sbjct: 60 QTSYQPGNLRPNRHLANIVRRLREVVLGPGKQL 92
>UNIPROTKB|I3LGG5 [details] [associations]
symbol:LOC100738479 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR000679 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50114 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101646 EMBL:CU856599
Ensembl:ENSSSCT00000032023 Uniprot:I3LGG5
Length = 488
Score = 131 (51.2 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQ-------CESECPLCKSQCTYADLRPL 91
E+ CPLCL L + PL + C H FC +CI ++++ ES CP+C+++ +LRP
Sbjct: 12 EVTCPLCLELLTDPLSIDCGHSFCQACITQNSEEWRMDQGGESSCPVCQTRYRPGNLRPN 71
Query: 92 AFLENI 97
L NI
Sbjct: 72 RHLANI 77
>UNIPROTKB|Q3ZEE5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9580 "Hylobates lar" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY923180 ProteinModelPortal:Q3ZEE5
SMR:Q3ZEE5 Uniprot:Q3ZEE5
Length = 493
Score = 131 (51.2 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQC-----ESECPLCKSQCTYADLRPLAF 93
E+ CP+CL L ++PL L C H FC +C+ + + E CP+C+ + ++RP
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKTSMPDGERSCPVCRISYQHKNIRPNRH 71
Query: 94 LENIIAIYKGLDASP 108
+ NI+ + + SP
Sbjct: 72 VANIVEKLREVKLSP 86
>UNIPROTKB|G3MWZ9 [details] [associations]
symbol:TRIM34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
EMBL:DAAA02040907 EMBL:DAAA02040908 Ensembl:ENSBTAT00000063426
Uniprot:G3MWZ9
Length = 844
Score = 134 (52.2 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 33/104 (31%), Positives = 52/104 (50%)
Query: 10 IWNSTMADSAANSKRSFNPLVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR- 68
+W +AA + + V++LQ+ E+ CP+C L + PL L C H FC +CI
Sbjct: 346 VWTGGSQGAAAMALNT----VMNLQE---EVSCPICRELLTEPLSLGCGHSFCQTCITNK 398
Query: 69 ----SAQCESECPLCKSQCTYADLRPLAFLENIIAIYKGLDASP 108
S +S CP+C +Q + +L P L NI+ + + SP
Sbjct: 399 ETDISLGGDSSCPVCGTQYSLGNLWPNLHLANIVERLRKVKLSP 442
Score = 123 (48.4 bits), Expect = 0.00073, P = 0.00073
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRS-------AQCESECPLCKSQCTYADLRPL 91
E+ CP+CL L + PL + C H FC +CI + +S CP+C++ +LRP
Sbjct: 40 EVTCPICLELLTEPLSIDCGHSFCQACITADNKESMPGQEGQSRCPVCQTSYWLGNLRPN 99
Query: 92 AFLENI 97
L NI
Sbjct: 100 RHLANI 105
>UNIPROTKB|Q5D7J2 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9555 "Papio anubis" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 CTD:85363 EMBL:AY843505
RefSeq:NP_001106102.1 UniGene:Pan.11156 ProteinModelPortal:Q5D7J2
SMR:Q5D7J2 GeneID:100126714 Uniprot:Q5D7J2
Length = 497
Score = 131 (51.2 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 26/81 (32%), Positives = 41/81 (50%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRS-------AQCESECPLCKSQCTYADLRPL 91
E+ CP+CL L + PL LPC H FC +CI + + E CP+C+ +++P
Sbjct: 12 EVTCPICLELLTEPLSLPCGHSFCQACITANHRKSMLYKEGERSCPVCRISYQPENIQPN 71
Query: 92 AFLENIIAIYKGLDASPSSNL 112
+ NI+ + + SP L
Sbjct: 72 RHVANIVEKLREVKLSPEEGL 92
>UNIPROTKB|B3KUN7 [details] [associations]
symbol:LONRF3 "LON peptidase N-terminal domain and RING
finger protein 3" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 Pfam:PF02190 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
EMBL:CH471161 HOGENOM:HOG000060199 HOVERGEN:HBG081924 EMBL:AL772284
UniGene:Hs.144266 HGNC:HGNC:21152 EMBL:AK097641 IPI:IPI00902452
SMR:B3KUN7 Ensembl:ENST00000422289 UCSC:uc004eqz.3 Uniprot:B3KUN7
Length = 503
Score = 131 (51.2 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 37 ALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESECPLCK---SQC 83
A +L+C LC+ LF P+ PC H FC C+ R ++CPLCK SQC
Sbjct: 206 ASDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQC 255
>UNIPROTKB|Q5E9T7 [details] [associations]
symbol:PHF17 "Protein Jade-1" species:9913 "Bos taurus"
[GO:0043983 "histone H4-K12 acetylation" evidence=ISS] [GO:0043981
"histone H4-K5 acetylation" evidence=ISS] [GO:0043982 "histone
H4-K8 acetylation" evidence=ISS] [GO:0043984 "histone H4-K16
acetylation" evidence=ISS] [GO:0043966 "histone H3 acetylation"
evidence=ISS] [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
PROSITE:PS50016 SMART:SM00249 GO:GO:0005737 GO:GO:0006915
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 eggNOG:COG5141 InterPro:IPR019786 PROSITE:PS01359
GO:GO:0043966 InterPro:IPR019542 Pfam:PF10513 GO:GO:0043983
HSSP:O43918 GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 EMBL:BT020833
IPI:IPI00696596 RefSeq:NP_001015559.1 UniGene:Bt.37172
ProteinModelPortal:Q5E9T7 PRIDE:Q5E9T7 GeneID:509264
KEGG:bta:509264 CTD:79960 HOGENOM:HOG000220882 HOVERGEN:HBG053585
InParanoid:Q5E9T7 KO:K11347 OrthoDB:EOG4BP1B2 NextBio:20868903
Uniprot:Q5E9T7
Length = 509
Score = 131 (51.2 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 43/137 (31%), Positives = 64/137 (46%)
Query: 361 RSHVIHVHSKCIEWAPQVYYAG-DTVKNL-KAELARGSK--LKCSRCGLK-GAALGCYVR 415
RS VH C W P+V + ++ + K S+ L CS C K GA++ C V+
Sbjct: 272 RSGTKWVHVSCALWIPEVSIGSPEKMEPITKVSHIPSSRWALVCSLCNEKFGASIQCSVK 331
Query: 416 SCRRSYHVPCA----LEISE--CRWDTENFLVLCPVHSSVKFPIEKSGHRSIRNRAAPLQ 469
+CR ++HV CA LE+ D F CP HSS + E G + + AP +
Sbjct: 332 NCRTAFHVTCAFDRGLEMKTILAENDEVKFKSYCPKHSSHRKAEEGLGEGTAQENGAP-E 390
Query: 470 LTPQEP--SFWGSSPNK 484
+P++P F G N+
Sbjct: 391 CSPRDPLEPFAGLEQNR 407
>UNIPROTKB|A5HUK1 [details] [associations]
symbol:TRIM39.2 "Tripartite motif protein 39" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
EMBL:AB268588 HOGENOM:HOG000234133 HOVERGEN:HBG001357
GeneTree:ENSGT00690000101808 OrthoDB:EOG42BX8J CTD:56658
EMBL:AADN02030124 IPI:IPI00604075 RefSeq:NP_001006196.2
UniGene:Gga.8738 SMR:A5HUK1 Ensembl:ENSGALT00000000152
GeneID:417041 KEGG:gga:417041 eggNOG:NOG265106 InParanoid:A5HUK1
OMA:DANNEVP NextBio:20820420 Uniprot:A5HUK1
Length = 463
Score = 136 (52.9 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 31/76 (40%), Positives = 40/76 (52%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESE---CPLCKSQCTYADLRPLAFLE 95
E C LCL F P+ + C H FC +CI R + + E CP CK+ T +LRP L
Sbjct: 13 EASCSLCLGFFQDPVSIHCGHNFCRACITRCWEEQEETFSCPRCKATATQRNLRPNRELA 72
Query: 96 NIIAIYKGLDA-SPSS 110
II I K L +PS+
Sbjct: 73 KIIEIAKRLSLRAPSA 88
Score = 39 (18.8 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 667 EEVSTIWNRLNEAEELASKIGCRVI 691
EE+S++ ++ E EE + C +
Sbjct: 221 EEISSVSEQIRELEEKCQQPPCEFL 245
>MGI|MGI:1890659 [details] [associations]
symbol:Trim39 "tripartite motif-containing 39" species:10090
"Mus musculus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
MGI:MGI:1890659 Pfam:PF00097 Prosite:PS00518 GO:GO:0005829
GO:GO:0005739 GO:GO:0006915 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOVERGEN:HBG001357 HOGENOM:HOG000234134 CTD:56658 eggNOG:NOG238084
KO:K12015 EMBL:AB046382 EMBL:AK053507 EMBL:BC031540 IPI:IPI00308801
IPI:IPI00480364 IPI:IPI00480438 RefSeq:NP_077788.2 UniGene:Mm.40624
ProteinModelPortal:Q9ESN2 SMR:Q9ESN2 STRING:Q9ESN2
PhosphoSite:Q9ESN2 PRIDE:Q9ESN2 GeneID:79263 KEGG:mmu:79263
UCSC:uc008ckv.1 InParanoid:Q9ESN2 OrthoDB:EOG480HWD NextBio:349899
CleanEx:MM_TRIM39 Genevestigator:Q9ESN2
GermOnline:ENSMUSG00000045409 Uniprot:Q9ESN2
Length = 488
Score = 131 (51.2 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
L+ L +E C +CL P+++ C H FC +CI R + + CP+C+ Y LR
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLR 79
Query: 90 PLAFLENIIAIYKGL 104
P L +++ I K L
Sbjct: 80 PNRQLGSMVEIAKQL 94
Score = 45 (20.9 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 451 FPIEKSGHRSIRNRAAPLQLTPQEPSFW 478
+P+ G R+ R AAPL + P P+ W
Sbjct: 462 WPLFYPGIRAGRKNAAPLTIRP--PTDW 487
Score = 37 (18.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 11/40 (27%), Positives = 15/40 (37%)
Query: 343 GLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAG 382
G+ L Y G DRSH+ E ++Y G
Sbjct: 429 GIFLDYEAGTLSFYNVTDRSHIYTFTDTFTEKLWPLFYPG 468
>RGD|1303115 [details] [associations]
symbol:Trim39 "tripartite motif-containing 39" species:10116
"Rattus norvegicus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=ISO] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 Pfam:PF00097 RGD:1303115 Prosite:PS00518
GO:GO:0005829 GO:GO:0005739 GO:GO:0006915 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0016567 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOGENOM:HOG000234133
HOVERGEN:HBG001357 GeneTree:ENSGT00700000104307 CTD:56658
eggNOG:NOG238084 KO:K12015 OrthoDB:EOG480HWD EMBL:BX883050
IPI:IPI00417367 RefSeq:NP_998727.1 UniGene:Rn.229996
ProteinModelPortal:Q6MFZ5 SMR:Q6MFZ5 STRING:Q6MFZ5
Ensembl:ENSRNOT00000001021 GeneID:309591 KEGG:rno:309591
UCSC:RGD:1303115 InParanoid:Q6MFZ5 NextBio:661022
ArrayExpress:Q6MFZ5 Genevestigator:Q6MFZ5
GermOnline:ENSRNOG00000000785 Uniprot:Q6MFZ5
Length = 488
Score = 131 (51.2 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
L+ L +E C +CL P+++ C H FC +CI R + + CP+C+ Y LR
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLR 79
Query: 90 PLAFLENIIAIYKGL 104
P L +++ I K L
Sbjct: 80 PNRQLGSMVEIAKQL 94
Score = 45 (20.9 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 451 FPIEKSGHRSIRNRAAPLQLTPQEPSFW 478
+P+ G R+ R AAPL + P P+ W
Sbjct: 462 WPLFYPGIRAGRKNAAPLTIRP--PTDW 487
Score = 37 (18.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 11/40 (27%), Positives = 15/40 (37%)
Query: 343 GLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAG 382
G+ L Y G DRSH+ E ++Y G
Sbjct: 429 GIFLDYEAGTLSFYNVTDRSHIYTFTDTFTEKLWPLFYPG 468
>UNIPROTKB|E1BZM2 [details] [associations]
symbol:E1BZM2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 SMART:SM00249 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00530000063780 OMA:TLCSFQE
EMBL:AADN02005390 EMBL:AADN02005391 EMBL:AADN02005392
IPI:IPI00586183 Ensembl:ENSGALT00000030139 Uniprot:E1BZM2
Length = 247
Score = 125 (49.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 28/65 (43%), Positives = 38/65 (58%)
Query: 385 VKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCAL-EISECRWDTEN--FLV 441
V+++ EL RG +L C+ C KGA +GC R+CRRSYH CAL + + D N + V
Sbjct: 59 VESVLNELKRGKRLVCNFCRKKGATVGCEERACRRSYHYFCALCDDAAIETDEVNGVYRV 118
Query: 442 LCPVH 446
C H
Sbjct: 119 FCSKH 123
>UNIPROTKB|B0V297 [details] [associations]
symbol:TRIM27 "Zinc finger protein RFP" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR020457 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Pfam:PF00097 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HOVERGEN:HBG001357
UniGene:Hs.440382 HGNC:HGNC:9975 ChiTaRS:TRIM27 EMBL:CR936876
EMBL:CR936883 EMBL:CR936965 IPI:IPI00893697 SMR:B0V297
Ensembl:ENST00000430891 Ensembl:ENST00000436621
Ensembl:ENST00000437415 Ensembl:ENST00000455861 Uniprot:B0V297
Length = 249
Score = 125 (49.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 36 LALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLRPLA 92
L E CP+CL F+ P++L C H C +C+ R +A+ CP C+ +RP
Sbjct: 10 LQQETTCPVCLQYFAEPMMLDCGHNICCACLARCWGTAETNVSCPQCRETFPQRHMRPNR 69
Query: 93 FLENIIAIYKGL 104
L N+ + K L
Sbjct: 70 HLANVTQLVKQL 81
>UNIPROTKB|H0Y7Q8 [details] [associations]
symbol:LONRF3 "LON peptidase N-terminal domain and RING
finger protein 3" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 EMBL:AL772284 HGNC:HGNC:21152
ProteinModelPortal:H0Y7Q8 Ensembl:ENST00000439603 Uniprot:H0Y7Q8
Length = 525
Score = 131 (51.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 37 ALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESECPLCK---SQC 83
A +L+C LC+ LF P+ PC H FC C+ R ++CPLCK SQC
Sbjct: 228 ASDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQC 277
>UNIPROTKB|A6NK02 [details] [associations]
symbol:TRIM75 "Putative tripartite motif-containing protein
75" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG001357
OrthoDB:EOG4NP73C EMBL:AC108465 IPI:IPI00398090
ProteinModelPortal:A6NK02 SMR:A6NK02 PaxDb:A6NK02 PRIDE:A6NK02
GeneCards:GC04P165980 HGNC:HGNC:32686 neXtProt:NX_A6NK02
eggNOG:NOG254111 InParanoid:A6NK02 NextBio:104801 CleanEx:HS_TRIM75
Genevestigator:A6NK02 Uniprot:A6NK02
Length = 468
Score = 133 (51.9 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 32/96 (33%), Positives = 46/96 (47%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESE---CPLCKSQCTYADLR 89
L L E KC +CL+ S P+ + C H FC SCI +S E CP+C+ QC R
Sbjct: 7 LTGLQAEAKCSICLDYLSDPVTIECGHNFCRSCIQQSWLDLQELFPCPVCRHQCQEGHFR 66
Query: 90 PLAFLENIIAIYKGLDASPSSNLLQPVYSAFGRHQE 125
L +I I K L ++ S+ Q + +H +
Sbjct: 67 SNTQLGRMIEIAKLLQSTKSNKRKQEETTLCEKHNQ 102
Score = 42 (19.8 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 557 IKACMEAMNPVGEEPYEINLDNHGCEEGPKTGRLRALNKAPKL 599
IK E+ N + I+L GC P+ L+ + K K+
Sbjct: 252 IKIFYESENESSPSIFSIHLKRDGCSFPPQYSALQRIIKKFKV 294
>UNIPROTKB|Q5D7I1 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9509 "Ateles geoffroyi" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY740616 EMBL:AY843516
ProteinModelPortal:Q5D7I1 SMR:Q5D7I1 Uniprot:Q5D7I1
Length = 547
Score = 131 (51.2 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 34/93 (36%), Positives = 43/93 (46%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSA------QCESECPLCKSQCTYADLRPLA 92
E+ CP+CL L + PL L C H FC +CI + Q E CPLC+ +LRP
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKESTLHQGERSCPLCRVSYQSENLRPNR 71
Query: 93 FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQE 125
L NI + + SP Q V RH E
Sbjct: 72 HLANIAERLREVMLSPEEG--QKV-DRCARHGE 101
>UNIPROTKB|C9JVI3 [details] [associations]
symbol:TRIM2 "Tripartite motif-containing protein 2"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 HGNC:HGNC:15974 ChiTaRS:TRIM2
EMBL:AC013477 EMBL:AC114791 IPI:IPI00925733
ProteinModelPortal:C9JVI3 SMR:C9JVI3 STRING:C9JVI3
Ensembl:ENST00000441616 UCSC:uc003ini.1 HOGENOM:HOG000198480
ArrayExpress:C9JVI3 Bgee:C9JVI3 Uniprot:C9JVI3
Length = 138
Score = 107 (42.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 28/91 (30%), Positives = 43/91 (47%)
Query: 27 NPLVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCES---ECPLCKSQC 83
+P+V + K L C +CL + P +LPC H FC C+ S CP+C+ Q
Sbjct: 10 SPVVRQIDKQFLI--CSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCR-QT 66
Query: 84 TYADLRPLAFLENIIAIYKGLDA---SPSSN 111
+ + +A L+N I +D +P SN
Sbjct: 67 SILPEKGVAALQNNFFITNLMDVLQRTPGSN 97
>TAIR|locus:2098505 [details] [associations]
symbol:AT3G07200 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002686 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 HSSP:P38398
EMBL:AC012395 ProtClustDB:CLSN2689957 IPI:IPI00548065
RefSeq:NP_001078119.1 RefSeq:NP_187376.1 UniGene:At.40383
ProteinModelPortal:Q9SFV0 SMR:Q9SFV0 EnsemblPlants:AT3G07200.1
EnsemblPlants:AT3G07200.2 GeneID:819908 KEGG:ath:AT3G07200
TAIR:At3g07200 InParanoid:Q9SFV0 OMA:NRRTRRE PhylomeDB:Q9SFV0
Genevestigator:Q9SFV0 Uniprot:Q9SFV0
Length = 182
Score = 119 (46.9 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESECPLCKSQCTYADL 88
+ CP+CL F++ + C HIFC CI + +++CP C+ + T DL
Sbjct: 124 KFSCPICLCPFTQEVSTKCGHIFCKKCIKNALSLQAKCPTCRKKITVKDL 173
>UNIPROTKB|H0Y4X7 [details] [associations]
symbol:PHF11 "PHD finger protein 11" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 SMART:SM00249 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL139321 HGNC:HGNC:17024 ChiTaRS:PHF11
ProteinModelPortal:H0Y4X7 Ensembl:ENST00000426879 Uniprot:H0Y4X7
Length = 286
Score = 126 (49.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 385 VKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALE---ISECRWDTENFLV 441
V+++K E+ RG KLKC C +GA +GC +++C ++YH CA + + + + +
Sbjct: 50 VESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKL 109
Query: 442 LCPVHSSVKFPI-----EKSGHRSIRNRAAPLQLTPQEP 475
LC H+ +FPI + SG + R R PL +P
Sbjct: 110 LCQQHA--QFPIIAQSAKFSGVKRKRGRKKPLSGNHVQP 146
>RGD|1306920 [details] [associations]
symbol:Phf17 "PHD finger protein 17" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA;ISO] [GO:0043981
"histone H4-K5 acetylation" evidence=IEA;ISO] [GO:0043982 "histone
H4-K8 acetylation" evidence=IEA;ISO] [GO:0043983 "histone H4-K12
acetylation" evidence=IEA;ISO] [GO:0043984 "histone H4-K16
acetylation" evidence=ISO] InterPro:IPR001965 InterPro:IPR019787
PROSITE:PS50016 SMART:SM00249 RGD:1306920 GO:GO:0005739
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0043966 InterPro:IPR019542 Pfam:PF10513
GO:GO:0043983 GO:GO:0000123 GO:GO:0043981 GO:GO:0043982
OrthoDB:EOG4BP1B2 OMA:EAHEGAC GeneTree:ENSGT00690000101689
IPI:IPI00367429 Ensembl:ENSRNOT00000018872 UCSC:RGD:1306920
Uniprot:D3ZM64
Length = 832
Score = 133 (51.9 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 41/126 (32%), Positives = 59/126 (46%)
Query: 361 RSHVIHVHSKCIEWAPQVYYAG-DTVKNL-KAELARGSK--LKCSRCGLK-GAALGCYVR 415
RS VH C W P+V + ++ + K S+ L CS C K GA++ C V+
Sbjct: 272 RSGTKWVHVSCALWIPEVSIGSPEKMEPITKVSHIPSSRWALVCSLCNEKFGASIQCSVK 331
Query: 416 SCRRSYHVPCA----LEISE--CRWDTENFLVLCPVHSSVKFPIEKSGHRSIRNRAAPLQ 469
+CR ++HV CA LE+ D F CP HSS + P E G + + A +
Sbjct: 332 NCRTAFHVTCAFDRGLEMKTILAENDEVKFKSYCPKHSSHRKPEESLGEGAAQENGAT-E 390
Query: 470 LTPQEP 475
+PQ P
Sbjct: 391 CSPQSP 396
>UNIPROTKB|F8W6N8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0005634
GO:GO:0005794 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HGNC:HGNC:16276 ChiTaRS:TRIM5 EMBL:AC109341
IPI:IPI01012489 ProteinModelPortal:F8W6N8 SMR:F8W6N8
Ensembl:ENST00000396853 ArrayExpress:F8W6N8 Bgee:F8W6N8
Uniprot:F8W6N8
Length = 327
Score = 127 (49.8 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQC------ESECPLCKSQCTYADLRPLA 92
E+ CP+CL L ++PL L C H FC +C+ + + ES CP+C+ ++RP
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPNR 71
Query: 93 FLENIIAIYKGLDASP 108
+ NI+ + + SP
Sbjct: 72 HVANIVEKLREVKLSP 87
>UNIPROTKB|E1BID7 [details] [associations]
symbol:TRIM69 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003877
Pfam:PF00622 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104222
OMA:IAAHKEN EMBL:DAAA02030051 IPI:IPI00717661
Ensembl:ENSBTAT00000009893 Uniprot:E1BID7
Length = 502
Score = 130 (50.8 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 33/101 (32%), Positives = 49/101 (48%)
Query: 13 STMADSAANSKRSFNPLV------LHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCI 66
S+ D+ ++S N ++ + +Q + EL CPLC + F L+L C H FC SCI
Sbjct: 8 SSKTDTDSDSYAEVNDVITQISSKVQIQDITTELHCPLCNDWFRDALMLSCGHNFCQSCI 67
Query: 67 PR--SAQC-ESECPLCKSQCTYADLRPLAFLENIIAIYKGL 104
Q E+ CP CK C Y++ LE ++ K L
Sbjct: 68 QNFWKQQANETFCPECKMLCQYSNCTFNLVLEKLVEKIKKL 108
>UNIPROTKB|F8VSB6 [details] [associations]
symbol:RNF41 "E3 ubiquitin-protein ligase NRDP1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031386 "protein tag" evidence=IEA] [GO:0005128
"erythropoietin receptor binding" evidence=IEA] [GO:0005135
"interleukin-3 receptor binding" evidence=IEA] [GO:0045619
"regulation of lymphocyte differentiation" evidence=IEA]
[GO:0045637 "regulation of myeloid cell differentiation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR015036
Pfam:PF08941 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0031386
SUPFAM:SSF49599 Gene3D:3.90.890.10 EMBL:AC073896 HGNC:HGNC:18401
IPI:IPI01020852 ProteinModelPortal:F8VSB6 SMR:F8VSB6
Ensembl:ENST00000552244 ArrayExpress:F8VSB6 Bgee:F8VSB6
Uniprot:F8VSB6
Length = 201
Score = 121 (47.7 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 39 ELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQCESECPLCKSQCTYADLRPLA-FLEN 96
+L CP+C + P+ P C+H FCN+CI + + CP+ +S T A LRP+ + N
Sbjct: 15 DLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHLRPVPRIMRN 74
Query: 97 IIA 99
+++
Sbjct: 75 MLS 77
>CGD|CAL0004874 [details] [associations]
symbol:orf19.3407 species:5476 "Candida albicans" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0042276 "error-prone translesion
synthesis" evidence=IEA] [GO:0070987 "error-free translesion
synthesis" evidence=IEA] [GO:0042275 "error-free postreplication
DNA repair" evidence=IEA] [GO:0000077 "DNA damage checkpoint"
evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0031144 "proteasome localization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003034 InterPro:IPR004580
InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800
SMART:SM00184 SMART:SM00513 SMART:SM00734 UniPathway:UPA00143
CGD:CAL0004874 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0003684 GO:GO:0016874 GO:GO:0008270 GO:GO:0006281
GO:GO:0003700 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL033391 EMBL:AACQ01000064
EMBL:AACQ01000065 RefSeq:XP_716657.1 RefSeq:XP_716717.1
ProteinModelPortal:Q5A4N5 STRING:Q5A4N5 GeneID:3641637
GeneID:3641662 KEGG:cal:CaO19.10910 KEGG:cal:CaO19.3407
eggNOG:COG5432 KO:K10627 TIGRFAMs:TIGR00599 Uniprot:Q5A4N5
Length = 378
Score = 128 (50.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 28/105 (26%), Positives = 49/105 (46%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESECPLCKSQCTYADLRPLA 92
L +L + +C +C +L + P+ CDH +C+ CI ++ CPLCK++ + L+
Sbjct: 20 LAELDILKRCYICKDLLNAPVRTQCDHTYCSQCIREFLLRDNRCPLCKTEVFESGLKRDP 79
Query: 93 FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSAN 137
LE I+ Y L P L + + + D S ++N
Sbjct: 80 LLEEIVISYASL--RPHLLRLLEIEKVESKQEVDREKSANESASN 122
>UNIPROTKB|Q5A4N5 [details] [associations]
symbol:RAD18 "Postreplication repair E3 ubiquitin-protein
ligase RAD18" species:237561 "Candida albicans SC5314" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001841 InterPro:IPR003034
InterPro:IPR004580 InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089
PROSITE:PS50800 SMART:SM00184 SMART:SM00513 SMART:SM00734
UniPathway:UPA00143 CGD:CAL0004874 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0003684 GO:GO:0016874 GO:GO:0008270
GO:GO:0006281 GO:GO:0003700 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL033391
EMBL:AACQ01000064 EMBL:AACQ01000065 RefSeq:XP_716657.1
RefSeq:XP_716717.1 ProteinModelPortal:Q5A4N5 STRING:Q5A4N5
GeneID:3641637 GeneID:3641662 KEGG:cal:CaO19.10910
KEGG:cal:CaO19.3407 eggNOG:COG5432 KO:K10627 TIGRFAMs:TIGR00599
Uniprot:Q5A4N5
Length = 378
Score = 128 (50.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 28/105 (26%), Positives = 49/105 (46%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESECPLCKSQCTYADLRPLA 92
L +L + +C +C +L + P+ CDH +C+ CI ++ CPLCK++ + L+
Sbjct: 20 LAELDILKRCYICKDLLNAPVRTQCDHTYCSQCIREFLLRDNRCPLCKTEVFESGLKRDP 79
Query: 93 FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSAN 137
LE I+ Y L P L + + + D S ++N
Sbjct: 80 LLEEIVISYASL--RPHLLRLLEIEKVESKQEVDREKSANESASN 122
>UNIPROTKB|F1RK19 [details] [associations]
symbol:PHF11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 SMART:SM00249 GO:GO:0008270
GeneTree:ENSGT00530000063780 CTD:51131 OMA:TLCSFQE EMBL:CU633573
RefSeq:NP_001231256.1 UniGene:Ssc.1217 Ensembl:ENSSSCT00000010295
GeneID:100518446 KEGG:ssc:100518446 Uniprot:F1RK19
Length = 307
Score = 129 (50.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 22/42 (52%), Positives = 32/42 (76%)
Query: 385 VKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCA 426
V+++K E+ RG KLKC+ CG KGA +GC ++SC ++YH CA
Sbjct: 91 VESVKKEIKRGRKLKCTFCGKKGATVGCDLKSCLKNYHFFCA 132
Score = 39 (18.8 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 543 MAILNGNWVLKIDWIKACMEA 563
MA+ + +LK+ ++K C EA
Sbjct: 188 MALNRPDVLLKVAFLKQCKEA 208
>RGD|1310105 [details] [associations]
symbol:Trim27 "tripartite motif-containing 27" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0002820 "negative regulation of adaptive immune response"
evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006469 "negative regulation of protein
kinase activity" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=IEA;ISO] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA;ISO] [GO:0045814 "negative regulation of gene
expression, epigenetic" evidence=IEA;ISO] [GO:0070206 "protein
trimerization" evidence=IEA;ISO] [GO:0072643 "interferon-gamma
secretion" evidence=IEA;ISO] [GO:0090281 "negative regulation of
calcium ion import" evidence=IEA;ISO] [GO:1900041 "negative
regulation of interleukin-2 secretion" evidence=IEA;ISO]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR020457 Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
RGD:1310105 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CH474072 GeneTree:ENSGT00700000104307
IPI:IPI00562695 UniGene:Rn.8393 Ensembl:ENSRNOT00000041671
UCSC:RGD:1310105 NextBio:632221 Uniprot:D4AAJ8
Length = 246
Score = 124 (48.7 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 24/74 (32%), Positives = 36/74 (48%)
Query: 34 QKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLRP 90
+ L E CP+CL F P++L C H C +C+ R +A+ CP C+ +RP
Sbjct: 8 ESLQQETTCPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRETFPQRHMRP 67
Query: 91 LAFLENIIAIYKGL 104
L N+ + K L
Sbjct: 68 NRHLANVTQLVKQL 81
>ASPGD|ASPL0000065492 [details] [associations]
symbol:uvsH species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006312 "mitotic
recombination" evidence=IMP] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000077 "DNA damage checkpoint" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0031144
"proteasome localization" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003034 InterPro:IPR004580
InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800
SMART:SM00184 SMART:SM00513 SMART:SM00734 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003684
GO:GO:0016874 GO:GO:0008270 GO:GO:0006281 GO:GO:0016567
EMBL:BN001304 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AACD01000127 eggNOG:COG5432 KO:K10627
TIGRFAMs:TIGR00599 EMBL:S79392 EMBL:Z49875 EMBL:Z49834 PIR:S55494
PIR:S57328 RefSeq:XP_680578.1 ProteinModelPortal:Q02398
STRING:Q02398 EnsemblFungi:CADANIAT00000127 GeneID:2869846
KEGG:ani:AN7309.2 HOGENOM:HOG000168108 OMA:YICKEFF
OrthoDB:EOG4F4WMB Uniprot:Q02398
Length = 443
Score = 129 (50.5 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 27/82 (32%), Positives = 41/82 (50%)
Query: 28 PLVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESECPLCKSQCTYAD 87
PL L L L+C +C + F P++ C H FC+ CI R E +CP C+S
Sbjct: 17 PLTL-LAPFETSLRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPTCRSSDQELK 75
Query: 88 LRPLAFLENIIAIYKGLDASPS 109
LR ++ ++ +K +A PS
Sbjct: 76 LRRNWVVQELVEGFK--NARPS 95
>UNIPROTKB|D6RAS2 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HGNC:HGNC:21162
EMBL:AC106872 IPI:IPI00967237 ProteinModelPortal:D6RAS2 SMR:D6RAS2
Ensembl:ENST00000507119 ArrayExpress:D6RAS2 Bgee:D6RAS2
Uniprot:D6RAS2
Length = 90
Score = 106 (42.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 26/78 (33%), Positives = 35/78 (44%)
Query: 30 VLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESE---CPLCKSQCTYA 86
V L L E CP+CL P+ + C H FC SC+ S + + CP+C+ Y
Sbjct: 4 VTALVNLQEESSCPICLEYLKDPVTINCGHNFCRSCLSVSWKDLDDTFPCPVCRFCFPYK 63
Query: 87 DLRPLAFLENIIAIYKGL 104
R L N+ I K L
Sbjct: 64 SFRRNPQLRNLTEIAKQL 81
>UNIPROTKB|K7GS78 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF02190 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00184 Prosite:PS00518 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR015947
SUPFAM:SSF88697 InterPro:IPR017907 GeneTree:ENSGT00440000033329
EMBL:CU928929 Ensembl:ENSSSCT00000036557 Uniprot:K7GS78
Length = 694
Score = 131 (51.2 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 37 ALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESECPLCK---SQC 83
A +L+C LC+ LF P+ PC H FC C+ R ++CPLCK SQC
Sbjct: 397 ASDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQC 446
>UNIPROTKB|Q2YEM8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:61851 "Hoolock hoolock" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
GO:GO:0031664 EMBL:AY899907 EMBL:AY899901 EMBL:AY899902
EMBL:AY899903 EMBL:AY899904 EMBL:AY899905 EMBL:AY899906
ProteinModelPortal:Q2YEM8 SMR:Q2YEM8 Uniprot:Q2YEM8
Length = 494
Score = 129 (50.5 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQC------ESECPLCKSQCTYADLRPLA 92
E+ CP+CL L ++PL L C H FC +C+ + + E CP+C+ + ++RP
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKTSMPDEGERSCPVCRISYQHKNIRPNR 71
Query: 93 FLENIIAIYKGLDASP 108
+ NI+ + + SP
Sbjct: 72 HVANIVEKLREVKLSP 87
>MGI|MGI:103291 [details] [associations]
symbol:Rai1 "retinoic acid induced 1" species:10090 "Mus
musculus" [GO:0001501 "skeletal system development" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001965 PROSITE:PS50016
SMART:SM00249 MGI:MGI:103291 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 GO:GO:0006357 GO:GO:0001501
GO:GO:0040015 PROSITE:PS01359 CTD:10743 eggNOG:NOG146768
HOVERGEN:HBG056862 ChiTaRS:RAI1 EMBL:D29801 EMBL:AL669954
EMBL:AK129449 EMBL:AK013909 IPI:IPI00454207 IPI:IPI00890011
PIR:T30250 RefSeq:NP_001032853.1 RefSeq:NP_033047.2
UniGene:Mm.296366 STRING:Q61818 PhosphoSite:Q61818 PaxDb:Q61818
PRIDE:Q61818 Ensembl:ENSMUST00000064190 Ensembl:ENSMUST00000090806
Ensembl:ENSMUST00000102688 Ensembl:ENSMUST00000171108 GeneID:19377
KEGG:mmu:19377 GeneTree:ENSGT00530000063684 HOGENOM:HOG000015259
InParanoid:B1AU87 OMA:PRMCTRS NextBio:296475 Bgee:Q61818
CleanEx:MM_RAI1 Genevestigator:Q61818 GermOnline:ENSMUSG00000062115
Uniprot:Q61818
Length = 1889
Score = 134 (52.2 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 25/80 (31%), Positives = 36/80 (45%)
Query: 367 VHSKCIEWAPQVYYAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCA 426
VH C W VY + L+ + + C+ C GA + C + C +YH PCA
Sbjct: 1806 VHEACAVWTSGVYLVAGKLFGLQEAMKVAVDMPCTSCHEPGATISCSYKGCIHTYHYPCA 1865
Query: 427 LEISECRWDTENFLVLCPVH 446
+ C + ENF + CP H
Sbjct: 1866 NDTG-CTFIEENFTLKCPKH 1884
Score = 54 (24.1 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 18/64 (28%), Positives = 26/64 (40%)
Query: 179 SSHTQAGGIRDCRPAQIDINQLDQLSPCSPPSFGDIKGSDNESNDQGGELSPESYLANRS 238
+S TQ GG D + ++L P S P G + Q G+ S SY +
Sbjct: 1450 ASSTQGGG-EDNSSGGGKKPKTEELGPASQPPEGRPCQPQTRAQKQPGQASYSSYSKRKR 1508
Query: 239 VKRG 242
+ RG
Sbjct: 1509 LSRG 1512
Score = 49 (22.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 22/91 (24%), Positives = 37/91 (40%)
Query: 172 NPNSAQPSSHTQAGGIRDCRPAQIDINQLDQLSPCSPPSFGDIKGS-DNESNDQGGELSP 230
+P A S QAG +C+P Q + + LS S S + +N SN L
Sbjct: 382 SPTDAASSVDPQAG---NCKPLQKEKLPDNLLSDLSLQSLTALTSQVENISNTVQQLLLS 438
Query: 231 ESYLANRSVKRGFDDRTRQEHRLSSSETAGS 261
++ + + + RT ++H+ GS
Sbjct: 439 KATMPQKKGVKNLVSRTPEQHKSQHCSPEGS 469
Score = 46 (21.3 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 38/157 (24%), Positives = 57/157 (36%)
Query: 40 LKCPLCLNLFS-RPLLLPCDHIFCNSCIPRSAQCESECPLCKSQCTYADLRPLAFLENII 98
L C LC N + + L C + C+P+ E + A L PL E +
Sbjct: 1653 LVCCLCQNPANFKDLGDLCGPYYPEHCLPKKKPKLKEKARLEGTLEEASL-PL---ERTL 1708
Query: 99 AIYKGLDASPSSNLLQPVYS------AFGRHQE-----DNSSSGQ-SLSANTLVQVSFNN 146
KGL+ S S+ P + A GR D + G SA L + +
Sbjct: 1709 ---KGLECSASTTAAAPTTATITTPTALGRLSRPDGPADPAKQGPLRTSARGLSRRLQSC 1765
Query: 147 SACDGQKGKGFELTGMGENKRDGGQNPNSAQPSSHTQ 183
CDGQ G E+ ++++ +P TQ
Sbjct: 1766 YCCDGQGDGGEEVAQADKSRKHECSKEAPTEPGGDTQ 1802
Score = 45 (20.9 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 161 GMGE-NKRDGGQNPNSAQ--PSSHTQAGGIRDCRP 192
G GE N GG+ P + + P+S G R C+P
Sbjct: 1455 GGGEDNSSGGGKKPKTEELGPASQPPEG--RPCQP 1487
>UNIPROTKB|K7GKX2 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
GeneTree:ENSGT00440000033329 EMBL:CU928929 RefSeq:XP_003360480.1
Ensembl:ENSSSCT00000035094 GeneID:100517799 Uniprot:K7GKX2
Length = 711
Score = 131 (51.2 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 37 ALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESECPLCK---SQC 83
A +L+C LC+ LF P+ PC H FC C+ R ++CPLCK SQC
Sbjct: 414 ASDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQC 463
>UNIPROTKB|Q9UIL8 [details] [associations]
symbol:PHF11 "PHD finger protein 11" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
PROSITE:PS50016 SMART:SM00249 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 EMBL:CH471075 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR013083 PROSITE:PS01359 MIM:147050
eggNOG:NOG276632 HOGENOM:HOG000290637 OrthoDB:EOG4QZ7M7 CTD:51131
OMA:TLCSFQE EMBL:AF155105 EMBL:AB011031 EMBL:AL139321 EMBL:BC017212
IPI:IPI00328598 IPI:IPI00479948 RefSeq:NP_001035533.1
RefSeq:NP_001035534.1 UniGene:Hs.369039 ProteinModelPortal:Q9UIL8
IntAct:Q9UIL8 STRING:Q9UIL8 PhosphoSite:Q9UIL8 DMDM:259016330
PRIDE:Q9UIL8 DNASU:51131 Ensembl:ENST00000357596
Ensembl:ENST00000378319 Ensembl:ENST00000442195
Ensembl:ENST00000488958 GeneID:51131 KEGG:hsa:51131 UCSC:uc001vdb.3
GeneCards:GC13P050069 HGNC:HGNC:17024 HPA:HPA016708 MIM:607796
neXtProt:NX_Q9UIL8 PharmGKB:PA134947696 HOVERGEN:HBG104320
InParanoid:Q9UIL8 ChiTaRS:PHF11 GenomeRNAi:51131 NextBio:53961
ArrayExpress:Q9UIL8 Bgee:Q9UIL8 CleanEx:HS_PHF11
Genevestigator:Q9UIL8 GermOnline:ENSG00000136147 Uniprot:Q9UIL8
Length = 331
Score = 126 (49.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 385 VKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALE---ISECRWDTENFLV 441
V+++K E+ RG KLKC C +GA +GC +++C ++YH CA + + + + +
Sbjct: 95 VESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKL 154
Query: 442 LCPVHSSVKFPI-----EKSGHRSIRNRAAPLQLTPQEP 475
LC H+ +FPI + SG + R R PL +P
Sbjct: 155 LCQQHA--QFPIIAQSAKFSGVKRKRGRKKPLSGNHVQP 191
>UNIPROTKB|E2RFW1 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071535 "RING-like zinc finger domain
binding" evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA]
[GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001739 "sex
chromatin" evidence=IEA] [GO:0001702 "gastrulation with mouth
forming second" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0000122 GO:GO:0001702
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 OMA:MELYFAP EMBL:AAEX03005159
Ensembl:ENSCAFT00000021407 Uniprot:E2RFW1
Length = 337
Score = 126 (49.4 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 45/178 (25%), Positives = 78/178 (43%)
Query: 29 LVLHLQKLALELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQC-ESECPLCKSQC-TY 85
+V+ + L EL CP+CL++ + C H FC CI + + ECP C+ + +
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 86 ADLRPLAFLENIIA-IYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSF 144
LRP + +I+ IY D + + V + +H + S S+ +Q
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYEAHQ--ERVLARINKHNNQQALS-HSIEEGLKIQAM- 153
Query: 145 NNSACDGQKGKGFELTGMGENKRDGGQNPNSAQPSSHT-QAGGIRDCRPAQIDINQLD 201
NS Q+GK ++ G D G + + + S+H+ Q G + R D + L+
Sbjct: 154 -NSRL--QRGKKQQIEN-GSGAEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGLE 207
>MGI|MGI:1277133 [details] [associations]
symbol:Phf11d "PHD finger protein 11D" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001965
PROSITE:PS50016 SMART:SM00249 MGI:MGI:1277133 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR013083 PROSITE:PS01359 EMBL:AK156583
EMBL:BC030186 EMBL:BC145673 IPI:IPI00280233 IPI:IPI00652438
IPI:IPI00944052 RefSeq:NP_950180.3 UniGene:Mm.479285
ProteinModelPortal:A6H5X4 PhosphoSite:A6H5X4 PRIDE:A6H5X4
Ensembl:ENSMUST00000095157 Ensembl:ENSMUST00000160425
Ensembl:ENSMUST00000161031 GeneID:219132 KEGG:mmu:219132
UCSC:uc007uef.2 UCSC:uc007ueg.2 UCSC:uc007ueh.2 CTD:219132
eggNOG:NOG276632 GeneTree:ENSGT00530000063780 HOGENOM:HOG000290637
InParanoid:A6H5X4 OMA:PERMELD OrthoDB:EOG4QZ7M7 NextBio:376585
Bgee:A6H5X4 Genevestigator:A6H5X4 Uniprot:A6H5X4
Length = 337
Score = 126 (49.4 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 385 VKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALE---ISECRWDTENFLV 441
VK++K E+ RG +LKCS C GA +GC + C++SYH CA + I + + + +
Sbjct: 78 VKSVKKEIWRGRRLKCSFCNKGGATVGCDLWFCKKSYHYVCAKKDQAILQVDGNHGTYKL 137
Query: 442 LCPVHS 447
CP HS
Sbjct: 138 FCPEHS 143
>UNIPROTKB|K7GLC4 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR013105 Pfam:PF07719
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
GeneTree:ENSGT00440000033329 EMBL:CU928929 GeneID:100517799
RefSeq:XP_003135396.2 Ensembl:ENSSSCT00000033278 Uniprot:K7GLC4
Length = 752
Score = 131 (51.2 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 37 ALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESECPLCK---SQC 83
A +L+C LC+ LF P+ PC H FC C+ R ++CPLCK SQC
Sbjct: 455 ASDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQC 504
>UNIPROTKB|G3X6C1 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 CTD:79836 OMA:VKLSALM
GeneTree:ENSGT00440000033329 EMBL:DAAA02067124
RefSeq:NP_001178063.1 UniGene:Bt.92361 ProteinModelPortal:G3X6C1
Ensembl:ENSBTAT00000003384 GeneID:508189 KEGG:bta:508189
NextBio:20868400 Uniprot:G3X6C1
Length = 759
Score = 131 (51.2 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 37 ALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESECPLCK---SQC 83
A +L+C LC+ LF P+ PC H FC C+ R ++CPLCK SQC
Sbjct: 462 ASDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQC 511
>UNIPROTKB|Q496Y0 [details] [associations]
symbol:LONRF3 "LON peptidase N-terminal domain and RING
finger protein 3" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR013105
Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
HSSP:Q8IZP6 GO:GO:0004176 eggNOG:COG2802 HOGENOM:HOG000060199
HOVERGEN:HBG081924 EMBL:AK026265 EMBL:AK091777 EMBL:AL772284
EMBL:BC099847 EMBL:BC100671 EMBL:BC103491 IPI:IPI00300753
IPI:IPI00640460 IPI:IPI00827481 RefSeq:NP_001027026.1
RefSeq:NP_079054.3 UniGene:Hs.144266 ProteinModelPortal:Q496Y0
SMR:Q496Y0 IntAct:Q496Y0 PhosphoSite:Q496Y0 DMDM:121949074
PRIDE:Q496Y0 Ensembl:ENST00000304778 Ensembl:ENST00000365713
Ensembl:ENST00000371628 Ensembl:ENST00000481285 GeneID:79836
KEGG:hsa:79836 UCSC:uc004eqw.3 UCSC:uc004eqx.3 CTD:79836
GeneCards:GC0XP118108 HGNC:HGNC:21152 neXtProt:NX_Q496Y0
PharmGKB:PA134900980 InParanoid:Q496Y0 OMA:VKLSALM PhylomeDB:Q496Y0
GenomeRNAi:79836 NextBio:69492 ArrayExpress:Q496Y0 Bgee:Q496Y0
CleanEx:HS_LONRF3 Genevestigator:Q496Y0 Uniprot:Q496Y0
Length = 759
Score = 131 (51.2 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 37 ALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESECPLCK---SQC 83
A +L+C LC+ LF P+ PC H FC C+ R ++CPLCK SQC
Sbjct: 462 ASDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQC 511
>UNIPROTKB|E9PFM0 [details] [associations]
symbol:TRIM6 "Tripartite motif-containing protein 6"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:AC015691
HGNC:HGNC:16277 ChiTaRS:TRIM6 IPI:IPI00470944
ProteinModelPortal:E9PFM0 SMR:E9PFM0 Ensembl:ENST00000380107
UCSC:uc009yeo.2 ArrayExpress:E9PFM0 Bgee:E9PFM0 Uniprot:E9PFM0
Length = 462
Score = 128 (50.1 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 27 NPLVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCI-PRSAQC------ESECPLC 79
+P+++ +++ E+ CP+CL L + PL + C H FC +CI P + E CP+C
Sbjct: 3 SPVLVDIRE---EVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVC 59
Query: 80 KSQCTYADLRPLAFLENII 98
++ +LRP L NI+
Sbjct: 60 QTSYQPGNLRPNRHLANIV 78
>UNIPROTKB|C9J0Q4 [details] [associations]
symbol:RAD18 "E3 ubiquitin-protein ligase RAD18"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0001741 "XY
body" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0009411 "response to UV"
evidence=IEA] [GO:0045910 "negative regulation of DNA
recombination" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0009411
GO:GO:0046872 GO:GO:0008270 GO:GO:0000785 GO:GO:0007283
GO:GO:0006974 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0001741 GO:GO:0045910 EMBL:AC068312
EMBL:AC008151 EMBL:AC034186 HGNC:HGNC:18278 HOGENOM:HOG000234845
IPI:IPI00879143 ProteinModelPortal:C9J0Q4 SMR:C9J0Q4 STRING:C9J0Q4
Ensembl:ENST00000413832 ArrayExpress:C9J0Q4 Bgee:C9J0Q4
Uniprot:C9J0Q4
Length = 92
Score = 105 (42.0 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 22/83 (26%), Positives = 44/83 (53%)
Query: 17 DSAANSKRSFNPLVLHLQKLALELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQCESE 75
DS A S+ + P + ++ + L+C +C F+ +++P C H +C+ CI + +++
Sbjct: 2 DSLAESR--WPPGLAVMKTIDDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQ 59
Query: 76 CPLCKSQCTYADLRPLAFLENII 98
CP C T DL+ L+ ++
Sbjct: 60 CPTCCVTVTEPDLKNNRILDELV 82
>UNIPROTKB|Q5D7H7 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9519 "Lagothrix lagotricha" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843520
ProteinModelPortal:Q5D7H7 SMR:Q5D7H7 Uniprot:Q5D7H7
Length = 547
Score = 129 (50.5 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 34/93 (36%), Positives = 43/93 (46%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSA------QCESECPLCKSQCTYADLRPLA 92
E+ CP+CL+L + PL L C H FC +CI Q E CPLC+ +LRP
Sbjct: 12 EVTCPICLDLLTEPLSLDCGHSFCQACITADHKESTLHQGERSCPLCRVGYQSENLRPNR 71
Query: 93 FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQE 125
L NI + + SP Q V RH E
Sbjct: 72 HLANIAERLREVMLSPEEG--QKV-DRCARHGE 101
>ZFIN|ZDB-GENE-060503-376 [details] [associations]
symbol:mll4a "myeloid/lymphoid or mixed-lineage
leukemia 4a" species:7955 "Danio rerio" [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR002857
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR015722
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02008 Pfam:PF05964
Pfam:PF05965 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51058
PROSITE:PS51542 PROSITE:PS51543 SMART:SM00249 SMART:SM00317
SMART:SM00541 SMART:SM00542 ZFIN:ZDB-GENE-060503-376 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0018024
GO:GO:0034968 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00690000101661 PANTHER:PTHR22884:SF10 EMBL:CR391915
EMBL:CR854888 IPI:IPI01016939 Ensembl:ENSDART00000091588
ArrayExpress:F1QFF8 Bgee:F1QFF8 Uniprot:F1QFF8
Length = 2863
Score = 137 (53.3 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 30/97 (30%), Positives = 49/97 (50%)
Query: 368 HSKCIEWAPQVYYAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCAL 427
H C W+ +V + ++ + +ARG ++C RCG GA +GC + SC+ +YH CA
Sbjct: 1416 HVNCCIWSAEVQETNGALLHVHSAVARGRFMRCERCGQTGATVGCCLTSCQSNYHFMCA- 1474
Query: 428 EISECRWDTENFLVLCPVHSS-VKFPIEK-SGHRSIR 462
S C + + V C H + IE+ +G +R
Sbjct: 1475 RASNCVFQHDK-KVYCYKHRELINSKIEQGNGFEVVR 1510
>UNIPROTKB|F1RU80 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 OMA:VKLSALM
GeneTree:ENSGT00440000033329 EMBL:CU928929
Ensembl:ENSSSCT00000013812 Uniprot:F1RU80
Length = 788
Score = 131 (51.2 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 37 ALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESECPLCK---SQC 83
A +L+C LC+ LF P+ PC H FC C+ R ++CPLCK SQC
Sbjct: 455 ASDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQC 504
>ZFIN|ZDB-GENE-071004-19 [details] [associations]
symbol:trim35-28 "tripartite motif containing 35-28"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-071004-19 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:BX571761 IPI:IPI00493500 Ensembl:ENSDART00000041787
OMA:LINISMH Bgee:F1QJY4 Uniprot:F1QJY4
Length = 477
Score = 128 (50.1 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 31/90 (34%), Positives = 42/90 (46%)
Query: 15 MADSAANSKRSFNPLVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRS--AQC 72
MADS+ + PL L +L CP+C ++F P LL C H FC C+ S Q
Sbjct: 1 MADSSDDDITDRPPL------LETDLTCPVCKDIFKEPELLSCSHSFCKVCLEGSWKNQT 54
Query: 73 ESECPLCKSQCTYADLRPLAFLENIIAIYK 102
+ +CP+C+ C P L N YK
Sbjct: 55 KRQCPMCRKCCDGETPIPNRALHNACVSYK 84
>UNIPROTKB|E1B9X1 [details] [associations]
symbol:RAI1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0040015 "negative regulation of multicellular organism
growth" evidence=IEA] [GO:0006357 "regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 SMART:SM00249 GO:GO:0005634 GO:GO:0008270
GO:GO:0006357 GO:GO:0001501 GO:GO:0040015 CTD:10743
GeneTree:ENSGT00530000063684 OMA:PRMCTRS EMBL:DAAA02048998
IPI:IPI00692380 RefSeq:XP_002695872.1 UniGene:Bt.103121
Ensembl:ENSBTAT00000006264 GeneID:528972 KEGG:bta:528972
NextBio:20874935 Uniprot:E1B9X1
Length = 1885
Score = 139 (54.0 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 27/80 (33%), Positives = 37/80 (46%)
Query: 367 VHSKCIEWAPQVYYAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCA 426
VH C W VY + L+ + + CS C GA +GC + C +YH PCA
Sbjct: 1802 VHEACAVWTGGVYLVAGKLFGLQEAMKVALDMTCSSCQEAGATIGCCHKGCLHTYHYPCA 1861
Query: 427 LEISECRWDTENFLVLCPVH 446
+ C + ENF + CP H
Sbjct: 1862 SDAG-CIFIEENFSLKCPKH 1880
Score = 48 (22.0 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 31/132 (23%), Positives = 48/132 (36%)
Query: 229 SPESYLANRSVKRGFDDRTRQEHRLSSSETAGSFRDSKRLKGFNY-----GPDS--VGVK 281
+PE Y S G S S T + L+ F Y GP + G+
Sbjct: 316 TPEQYYQTFSPSSGHSPARSVGRSPSYSSTPSPLMPN--LENFPYNQQPLGPGAFPAGLT 373
Query: 282 SSGHSQSTVFRSESLMASKSDSELKSVAALASEKMPPISIDSCANNYICGFC-QSSRISE 340
H + S + AS D++ + AL +K+P + + + + Q IS
Sbjct: 374 DHSHFMPLLNPSPTDAASSVDTQAANCKALQKDKLPESLLSDLSLHSLTALTSQVENISN 433
Query: 341 -VTGLMLHYANG 351
V L+L A G
Sbjct: 434 TVQQLLLSKAAG 445
>UNIPROTKB|F1RJD9 [details] [associations]
symbol:LOC100738479 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR000679 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50114
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101646 OMA:ACITQNS EMBL:CU856599
Ensembl:ENSSSCT00000016023 Uniprot:F1RJD9
Length = 831
Score = 131 (51.2 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQ-------CESECPLCKSQCTYADLRPL 91
E+ CPLCL L + PL + C H FC +CI ++++ ES CP+C+++ +LRP
Sbjct: 40 EVTCPLCLELLTDPLSIDCGHSFCQACITQNSEEWRMDQGGESSCPVCQTRYRPGNLRPN 99
Query: 92 AFLENI 97
L NI
Sbjct: 100 RHLANI 105
>UNIPROTKB|F1MVP3 [details] [associations]
symbol:PHF17 "Protein Jade-1" species:9913 "Bos taurus"
[GO:0043983 "histone H4-K12 acetylation" evidence=IEA] [GO:0043982
"histone H4-K8 acetylation" evidence=IEA] [GO:0043981 "histone
H4-K5 acetylation" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0000123 "histone acetyltransferase complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016 SMART:SM00249
GO:GO:0005739 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0043966 InterPro:IPR019542
Pfam:PF10513 GO:GO:0043983 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 IPI:IPI00696596 OMA:EAHEGAC
GeneTree:ENSGT00690000101689 EMBL:DAAA02044640
Ensembl:ENSBTAT00000032115 Uniprot:F1MVP3
Length = 843
Score = 131 (51.2 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 43/137 (31%), Positives = 64/137 (46%)
Query: 361 RSHVIHVHSKCIEWAPQVYYAG-DTVKNL-KAELARGSK--LKCSRCGLK-GAALGCYVR 415
RS VH C W P+V + ++ + K S+ L CS C K GA++ C V+
Sbjct: 272 RSGTKWVHVSCALWIPEVSIGSPEKMEPITKVSHIPSSRWALVCSLCNEKFGASIQCSVK 331
Query: 416 SCRRSYHVPCA----LEISE--CRWDTENFLVLCPVHSSVKFPIEKSGHRSIRNRAAPLQ 469
+CR ++HV CA LE+ D F CP HSS + E G + + AP +
Sbjct: 332 NCRTAFHVTCAFDRGLEMKTILAENDEVKFKSYCPKHSSHRKAEEGLGEGTAQENGAP-E 390
Query: 470 LTPQEP--SFWGSSPNK 484
+P++P F G N+
Sbjct: 391 CSPRDPLEPFAGLEQNR 407
>UNIPROTKB|E9PJJ9 [details] [associations]
symbol:TRIM68 "E3 ubiquitin-protein ligase TRIM68"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC090719 HGNC:HGNC:21161
ChiTaRS:TRIM68 IPI:IPI00977425 ProteinModelPortal:E9PJJ9 SMR:E9PJJ9
Ensembl:ENST00000531101 ArrayExpress:E9PJJ9 Bgee:E9PJJ9
Uniprot:E9PJJ9
Length = 187
Score = 118 (46.6 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 28/93 (30%), Positives = 45/93 (48%)
Query: 27 NPLVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSC------IPRSAQCES-ECPLC 79
+P L ++ + E+ CP+C+ P+ + C H FC+SC IP +Q CPLC
Sbjct: 2 DPTAL-VEAIVEEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLC 60
Query: 80 KSQCTYADLRPLAFLENIIAIYKGLDASPSSNL 112
++ +LRP L N++ + L P L
Sbjct: 61 RAPVQPRNLRPNWQLANVVEKVRLLRLHPGMGL 93
>UNIPROTKB|Q5C8T6 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9595 "Gorilla gorilla gorilla" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0002218 "activation of
innate immune response" evidence=ISS] [GO:0002221 "pattern
recognition receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY899872 EMBL:AY899866 EMBL:AY899867
EMBL:AY899868 EMBL:AY899869 EMBL:AY899870 EMBL:AY899871
EMBL:AY710300 EMBL:AY740620 EMBL:DQ298178 EMBL:AY843510
EMBL:AY923178 EMBL:DQ437600 ProteinModelPortal:Q5C8T6 SMR:Q5C8T6
Uniprot:Q5C8T6
Length = 493
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQC------ESECPLCKSQCTYADLRPLA 92
E+ CP+CL L ++PL L C H FC +C+ + + ES CP+C+ ++RP
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHEKSMLDKGESSCPVCRISYQPENIRPNR 71
Query: 93 FLENIIAIYKGLDASP 108
+ NI+ + + SP
Sbjct: 72 HVANIVEKLREVKLSP 87
>ZFIN|ZDB-GENE-080219-13 [details] [associations]
symbol:trim35-39 "tripartite motif containing 35-39"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-080219-13 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:BX005466 IPI:IPI00932638 Ensembl:ENSDART00000082154
OMA:ICEVISS Bgee:F1QQG3 Uniprot:F1QQG3
Length = 447
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPR--SAQCESECPLCKSQCTYADLRPLAFLEN 96
E+ CP+C +F P+LL C H FC CI + + ECP+C+ + + D L+N
Sbjct: 8 EISCPICCEIFKSPILLSCSHSFCKECIQQFWRTKISRECPVCRRRSSKDDPPSNLVLKN 67
Query: 97 IIAIYK 102
+ +++
Sbjct: 68 LCELFE 73
>UNIPROTKB|A2AAZ4 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL662832 EMBL:AL662795 EMBL:AL773535
EMBL:BX294158 EMBL:CR759928 EMBL:BX927214 EMBL:CR759281
EMBL:BX248580 HGNC:HGNC:10065 IPI:IPI00790609 SMR:A2AAZ4
Ensembl:ENST00000412150 Ensembl:ENST00000418057
Ensembl:ENST00000426676 Ensembl:ENST00000438089
Ensembl:ENST00000440271 Ensembl:ENST00000447542
Ensembl:ENST00000450818 Uniprot:A2AAZ4
Length = 74
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCK 80
L+ L +E C +CL P+++ C H FC +CI R + + CP+C+
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCR 70
>UNIPROTKB|C9JNB9 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC024221 HGNC:HGNC:30834
IPI:IPI00946347 ProteinModelPortal:C9JNB9 SMR:C9JNB9 STRING:C9JNB9
Ensembl:ENST00000468542 ArrayExpress:C9JNB9 Bgee:C9JNB9
Uniprot:C9JNB9
Length = 68
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 31 LHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQ 71
L + EL CP+C ++F P +LPC H FC +C+ Q
Sbjct: 6 LEMHNFEEELTCPICYSIFEDPRVLPCSHTFCRNCLENILQ 46
>ZFIN|ZDB-GENE-080520-3 [details] [associations]
symbol:mll3a "myeloid/lymphoid or mixed-lineage
leukemia 3a" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0032259
"methylation" evidence=IEA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR003888 InterPro:IPR003889
Pfam:PF05964 Pfam:PF05965 PROSITE:PS50280 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00249 SMART:SM00317 SMART:SM00541
SMART:SM00542 ZFIN:ZDB-GENE-080520-3 GO:GO:0005634 GO:GO:0008270
GO:GO:0008168 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00690000101661 EMBL:BX294185 EMBL:BX294167
IPI:IPI00898121 Ensembl:ENSDART00000137010 ArrayExpress:F1Q6F2
Uniprot:F1Q6F2
Length = 1178
Score = 132 (51.5 bits), Expect = 0.00012, P = 0.00012
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 367 VHSKCIEWAPQVY--YAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVP 424
VH C W+ +VY AG + N++ L RG ++C+ C GA GC+ C +YH
Sbjct: 686 VHLNCALWSTEVYETQAGALI-NVELALRRGLSVRCAYCQQTGATSGCHRLRCTNAYHFT 744
Query: 425 CALEISECRWDTENFLVLCPVH 446
CAL+ ++C + + + LC +H
Sbjct: 745 CALK-AQCTFFKDKTM-LCHLH 764
>UNIPROTKB|A6PVI4 [details] [associations]
symbol:MID2 "Probable E3 ubiquitin-protein ligase MID2"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL109946
HOVERGEN:HBG056432 EMBL:AL034399 UniGene:Hs.12256 HGNC:HGNC:7096
IPI:IPI00956726 SMR:A6PVI4 STRING:A6PVI4 Ensembl:ENST00000451923
HOGENOM:HOG000170021 Uniprot:A6PVI4
Length = 219
Score = 118 (46.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 34/94 (36%), Positives = 46/94 (48%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRS--AQC---ESECPLCKSQCTYAD 87
++ L EL CP+CL LF PLLLPC H C SC R + C ES P+ QC
Sbjct: 1 METLESELTCPICLELFEDPLLLPCAHSLCFSCAHRILVSSCSSGESIEPITAFQC---- 56
Query: 88 LRPLAFLENIIAI-YKGLDASPSSNLLQPVYSAF 120
P +I++ ++GLD + LQ + F
Sbjct: 57 --PTC--RYVISLNHRGLDGLKRNVTLQNIIDRF 86
Score = 41 (19.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/52 (23%), Positives = 21/52 (40%)
Query: 285 HSQSTVFRSESLMASKSDSELKSVAAL--ASEKMPPISIDSCANNYICGFCQ 334
H F S L+ D+ L+ + L +EK+ + + IC C+
Sbjct: 150 HPNKKPFTSHRLVEPVPDTHLRGITCLDHENEKVNMYCVSD--DQLICALCK 199
>UNIPROTKB|L7N078 [details] [associations]
symbol:TRIM6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA]
GeneTree:ENSGT00690000101646 EMBL:AAEX03012850
Ensembl:ENSCAFT00000010104 Uniprot:L7N078
Length = 562
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 28/81 (34%), Positives = 40/81 (49%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIP-RSAQC------ESECPLCKSQCTYADLRPL 91
E+ CP+CL L + P+ + C H FC +CI S + ES CP+C++ DLRP
Sbjct: 87 EVTCPICLELLTEPVSIDCGHSFCQACIMGNSTELVMGQDGESSCPVCQTSYQPGDLRPN 146
Query: 92 AFLENIIAIYKGLDASPSSNL 112
L NI + + P L
Sbjct: 147 RHLANIAERLREVVLGPGMQL 167
>UNIPROTKB|Q5SPU2 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG001357 EMBL:AL662832 EMBL:AL844220 EMBL:BX927221
EMBL:CR759838 EMBL:CR788282 EMBL:BX248419 EMBL:CR388382
EMBL:BX927189 UniGene:Hs.720054 UniGene:Hs.731863 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00647769
SMR:Q5SPU2 Ensembl:ENST00000415789 Ensembl:ENST00000418026
Ensembl:ENST00000419171 Ensembl:ENST00000419401
Ensembl:ENST00000422881 Ensembl:ENST00000433361
Ensembl:ENST00000433836 Ensembl:ENST00000453442 UCSC:uc003npu.1
HOGENOM:HOG000120116 Uniprot:Q5SPU2
Length = 157
Score = 111 (44.1 bits), Expect = 0.00012, P = 0.00012
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCI----PRSAQCESECPLCKSQCTYADL 88
L+ L E+ C +CL+ P+ + C H+FC SC P S CPLCK ++
Sbjct: 7 LRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGS-RPVCPLCKKPFKKENI 65
Query: 89 RPLAFLENII 98
RP+ L +++
Sbjct: 66 RPVWQLASLV 75
>RGD|2324324 [details] [associations]
symbol:Mll2 "myeloid/lymphoid or mixed-lineage leukemia 2"
species:10116 "Rattus norvegicus" [GO:0001555 "oocyte growth"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IEA;ISO] [GO:0006342 "chromatin silencing" evidence=ISO]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA;ISO] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IEA;ISO] [GO:0035097 "histone methyltransferase complex"
evidence=IEA;ISO] [GO:0043627 "response to estrogen stimulus"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0048477 "oogenesis" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR003888 InterPro:IPR003889
Pfam:PF05964 Pfam:PF05965 PROSITE:PS50280 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00249 SMART:SM00317 SMART:SM00541
SMART:SM00542 RGD:2324324 GO:GO:0005634 GO:GO:0008270 GO:GO:0008168
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 IPI:IPI00767211
Ensembl:ENSRNOT00000020342 ArrayExpress:F1M0L4 Uniprot:F1M0L4
Length = 1250
Score = 137 (53.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 31/90 (34%), Positives = 45/90 (50%)
Query: 367 VHSKCIEWAPQVYYA-GDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPC 425
VH C W+ +VY G + N++ L RG KCS C GA C C YH C
Sbjct: 771 VHLNCALWSTEVYETQGGALMNVEVALHRGLLTKCSLCQRTGATGSCNRMRCPNVYHFAC 830
Query: 426 ALEISECRWDTENFLVLCPVHSSVKFPIEK 455
A+ ++C + + + LCP+H +K P E+
Sbjct: 831 AIR-AKCMFFKDKTM-LCPMHK-IKGPCEQ 857
Score = 45 (20.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 33/157 (21%), Positives = 54/157 (34%)
Query: 161 GMGENKRDGGQN-PNSAQPS-SHTQAGGIRDCR------PAQIDINQLDQLSPCSPPSFG 212
G G D N P + +P S AG + P+ + I Q + PC+
Sbjct: 84 GKGLGPWDPSDNLPEAQKPEQSSLAAGRLEQVNGQVAHEPSHLSIKQEPREEPCA----- 138
Query: 213 DIKGSDNESNDQGGELSPESYLANRSVKRGFDDRTRQEHRLSSSETAGSFRDSKRLKGFN 272
G+ + GE + +N + G R+ H L R G
Sbjct: 139 --LGAQTVKREANGEPAGAPGTSNHLLLAG--SRSEAGHLLLQK----LLRAKNVQLGAG 190
Query: 273 YGPDSVGVKSSGHSQSTVFRSESLMASKSDSELKSVA 309
GP+ + + +GH S + E + S S+ + A
Sbjct: 191 RGPEGLRAEINGHVDSKLSGQEQKLQGTSSSKEDAAA 227
Score = 40 (19.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 285 HSQSTVFRSESLMASKSDSELKSVAALASEKMPP 318
H + +S K +E+KS+ LA+ PP
Sbjct: 364 HPKDAASAQDSERTLKDAAEVKSLDLLAALPTPP 397
Score = 39 (18.8 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 275 PDSVGVKSSGHSQSTVFRSESLMASKS-DSELKSVAALASEKMP 317
P + K G S+ +V + S A+K+ + + +VA L S K+P
Sbjct: 483 PATAWEKGKG-SEVSVMLTVSAAAAKNLNGVMVAVAELLSMKIP 525
>UNIPROTKB|A6NLP3 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005634 GO:GO:0005794 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407 EMBL:AC015691
EMBL:AC025016 EMBL:AC131574 HOVERGEN:HBG001357 HOGENOM:HOG000234134
HGNC:HGNC:16276 ChiTaRS:TRIM5 EMBL:AC109341 IPI:IPI00394971
ProteinModelPortal:A6NLP3 SMR:A6NLP3 IntAct:A6NLP3 STRING:A6NLP3
PRIDE:A6NLP3 Ensembl:ENST00000305836 ArrayExpress:A6NLP3
Bgee:A6NLP3 Uniprot:A6NLP3
Length = 493
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQC------ESECPLCKSQCTYADLRPLA 92
E+ CP+CL L ++PL L C H FC +C+ + + ES CP+C+ ++RP
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPNR 71
Query: 93 FLENIIAIYKGLDASP 108
+ NI+ + + SP
Sbjct: 72 HVANIVEKLREVKLSP 87
>UNIPROTKB|Q9C035 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0008329
"pattern recognition receptor activity" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0070534
"protein K63-linked ubiquitination" evidence=IDA] [GO:0051092
"positive regulation of NF-kappaB transcription factor activity"
evidence=IMP] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IMP] [GO:0031664 "regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IMP]
[GO:0043410 "positive regulation of MAPK cascade" evidence=IMP]
[GO:0002218 "activation of innate immune response" evidence=IDA]
[GO:0051607 "defense response to virus" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0070206 "protein trimerization" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IDA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0002221
"pattern recognition receptor signaling pathway" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0005794 GO:GO:0019048 EMBL:CH471064
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0051607
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
GO:GO:0070206 InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870
PROSITE:PS50188 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
EMBL:AC015691 HOVERGEN:HBG001357 OrthoDB:EOG4229JJ GO:GO:0031664
EMBL:AF220025 EMBL:AF220026 EMBL:AF220027 EMBL:AF220028
EMBL:AF220029 EMBL:AY625000 EMBL:DQ301444 EMBL:DQ301445
EMBL:DQ301446 EMBL:DQ301447 EMBL:DQ301448 EMBL:DQ301449
EMBL:DQ301450 EMBL:DQ301451 EMBL:DQ301452 EMBL:DQ301453
EMBL:DQ301454 EMBL:DQ301455 EMBL:DQ301456 EMBL:DQ301457
EMBL:DQ301458 EMBL:DQ301459 EMBL:DQ301460 EMBL:DQ301461
EMBL:DQ301462 EMBL:DQ301463 EMBL:DQ301464 EMBL:DQ301465
EMBL:DQ301466 EMBL:DQ301467 EMBL:DQ301468 EMBL:DQ301469
EMBL:DQ301470 EMBL:DQ301471 EMBL:DQ301472 EMBL:DQ301473
EMBL:DQ301474 EMBL:DQ301475 EMBL:DQ301476 EMBL:DQ301477
EMBL:DQ301478 EMBL:DQ301479 EMBL:DQ301480 EMBL:DQ288685
EMBL:JF928461 EMBL:JF928462 EMBL:AK027593 EMBL:EU260465
EMBL:BC021258 IPI:IPI00394972 IPI:IPI00394973 IPI:IPI00394974
IPI:IPI00394975 IPI:IPI00873422 RefSeq:NP_149023.2
RefSeq:NP_149083.2 RefSeq:NP_149084.2 UniGene:Hs.125300 PDB:2ECV
PDB:2YRG PDBsum:2ECV PDBsum:2YRG ProteinModelPortal:Q9C035
SMR:Q9C035 IntAct:Q9C035 STRING:Q9C035 PhosphoSite:Q9C035
DMDM:38605459 PaxDb:Q9C035 PRIDE:Q9C035 DNASU:85363
Ensembl:ENST00000380027 Ensembl:ENST00000380034
Ensembl:ENST00000396847 Ensembl:ENST00000396855
Ensembl:ENST00000433961 GeneID:85363 KEGG:hsa:85363 UCSC:uc001mbm.2
UCSC:uc001mbn.3 UCSC:uc001mbp.3 CTD:85363 GeneCards:GC11M005641
H-InvDB:HIX0009393 HGNC:HGNC:16276 HPA:CAB013497 HPA:HPA023420
HPA:HPA023422 MIM:608487 neXtProt:NX_Q9C035 PharmGKB:PA38109
eggNOG:NOG253216 KO:K10648 OMA:WILGVCA ChiTaRS:TRIM5
EvolutionaryTrace:Q9C035 GenomeRNAi:85363 NextBio:75883
ArrayExpress:Q9C035 Bgee:Q9C035 Genevestigator:Q9C035
GermOnline:ENSG00000132256 Uniprot:Q9C035
Length = 493
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQC------ESECPLCKSQCTYADLRPLA 92
E+ CP+CL L ++PL L C H FC +C+ + + ES CP+C+ ++RP
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPNR 71
Query: 93 FLENIIAIYKGLDASP 108
+ NI+ + + SP
Sbjct: 72 HVANIVEKLREVKLSP 87
>UNIPROTKB|Q1ACD8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9597 "Pan paniscus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
GO:GO:0031664 EMBL:DQ229282 ProteinModelPortal:Q1ACD8 SMR:Q1ACD8
Uniprot:Q1ACD8
Length = 493
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQC------ESECPLCKSQCTYADLRPLA 92
E+ CP+CL L ++PL L C H FC +C+ + + ES CP+C+ ++RP
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPNR 71
Query: 93 FLENIIAIYKGLDASP 108
+ NI+ + + SP
Sbjct: 72 HVANIVEKLREVKLSP 87
>UNIPROTKB|Q5D7J1 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9598 "Pan troglodytes" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HOGENOM:HOG000234134 HSSP:Q14134 GO:GO:0031664 CTD:85363
eggNOG:NOG253216 KO:K10648 EMBL:AH014830 EMBL:AY740617
EMBL:AY843506 EMBL:DQ298177 EMBL:AY923177 EMBL:DQ437595
RefSeq:NP_001012668.1 UniGene:Ptr.6259 ProteinModelPortal:Q5D7J1
SMR:Q5D7J1 STRING:Q5D7J1 GeneID:503563 KEGG:ptr:503563
NextBio:20866205 Uniprot:Q5D7J1
Length = 493
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQC------ESECPLCKSQCTYADLRPLA 92
E+ CP+CL L ++PL L C H FC +C+ + + ES CP+C+ ++RP
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPNR 71
Query: 93 FLENIIAIYKGLDASP 108
+ NI+ + + SP
Sbjct: 72 HVANIVEKLREVKLSP 87
>UNIPROTKB|C9JZJ7 [details] [associations]
symbol:MID1 "Midline-1" species:9606 "Homo sapiens"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
PROSITE:PS50089 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HGNC:HGNC:7095
HOGENOM:HOG000170021 EMBL:AC002349 EMBL:AC008008 EMBL:AC117406
EMBL:U96409 IPI:IPI00646829 ProteinModelPortal:C9JZJ7 SMR:C9JZJ7
STRING:C9JZJ7 Ensembl:ENST00000423614 UCSC:uc004cuc.1
ArrayExpress:C9JZJ7 Bgee:C9JZJ7 Uniprot:C9JZJ7
Length = 197
Score = 118 (46.6 bits), Expect = 0.00014, P = 0.00014
Identities = 37/133 (27%), Positives = 59/133 (44%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRS--AQC---ES-------ECPLCK 80
++ L EL CP+CL LF PLLLPC H C +C R + C ES +CP C+
Sbjct: 1 METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR 60
Query: 81 SQCTYADLRPLAFLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLV 140
T + R L L+ + + +D +++ P + R + ++ + + L
Sbjct: 61 HVITLSQ-RGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLC 119
Query: 141 QVSFNNSACDGQK 153
Q + A D K
Sbjct: 120 QFCDQDPAQDAVK 132
>UNIPROTKB|E9PR29 [details] [associations]
symbol:TRIM68 "E3 ubiquitin-protein ligase TRIM68"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC090719 HGNC:HGNC:21161
ChiTaRS:TRIM68 IPI:IPI00983538 ProteinModelPortal:E9PR29 SMR:E9PR29
Ensembl:ENST00000533021 ArrayExpress:E9PR29 Bgee:E9PR29
Uniprot:E9PR29
Length = 198
Score = 118 (46.6 bits), Expect = 0.00014, P = 0.00014
Identities = 28/93 (30%), Positives = 45/93 (48%)
Query: 27 NPLVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSC------IPRSAQCES-ECPLC 79
+P L ++ + E+ CP+C+ P+ + C H FC+SC IP +Q CPLC
Sbjct: 2 DPTAL-VEAIVEEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLC 60
Query: 80 KSQCTYADLRPLAFLENIIAIYKGLDASPSSNL 112
++ +LRP L N++ + L P L
Sbjct: 61 RAPVQPRNLRPNWQLANVVEKVRLLRLHPGMGL 93
>MGI|MGI:1921615 [details] [associations]
symbol:Lonrf3 "LON peptidase N-terminal domain and ring
finger 3" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 MGI:MGI:1921615 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 eggNOG:COG2802
HOGENOM:HOG000060199 HOVERGEN:HBG081924 CTD:79836 EMBL:AK016522
EMBL:AL450395 EMBL:BC120688 EMBL:BC120690 IPI:IPI00137246
RefSeq:NP_083170.1 UniGene:Mm.327654 HSSP:Q13049
ProteinModelPortal:Q9D4H7 SMR:Q9D4H7 PhosphoSite:Q9D4H7
PRIDE:Q9D4H7 Ensembl:ENSMUST00000016383 GeneID:74365 KEGG:mmu:74365
UCSC:uc009sxm.1 GeneTree:ENSGT00440000033329 InParanoid:Q9D4H7
OrthoDB:EOG4RXXZM NextBio:340559 Bgee:Q9D4H7 CleanEx:MM_LONRF3
Genevestigator:Q9D4H7 Uniprot:Q9D4H7
Length = 753
Score = 129 (50.5 bits), Expect = 0.00014, P = 0.00014
Identities = 26/69 (37%), Positives = 36/69 (52%)
Query: 37 ALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESECPLCKS---QCTYA-DLRPLA 92
A +L+C LC+ LF P+ PC H FC C+ R ++CPLCK QC +
Sbjct: 456 ASDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDVLLQCLPSRKYSKNV 515
Query: 93 FLENIIAIY 101
LE +IA +
Sbjct: 516 ILEELIATF 524
>UNIPROTKB|B4E0G4 [details] [associations]
symbol:PHF6 "cDNA FLJ60207, highly similar to PHD finger
protein 6" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 SMART:SM00249
GO:GO:0008270 EMBL:AC004383 HOGENOM:HOG000026798 HOVERGEN:HBG049389
EMBL:AL591668 UniGene:Hs.356501 HGNC:HGNC:18145 ChiTaRS:PHF6
EMBL:AK303369 IPI:IPI00939291 STRING:B4E0G4 Ensembl:ENST00000416404
UCSC:uc011mvk.2 Uniprot:B4E0G4
Length = 331
Score = 127 (49.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 48/212 (22%), Positives = 87/212 (41%)
Query: 275 PDSVGVKSSGHSQSTVFR--SESLMASKSDSELKSVAALASEKMPPISIDSCANNYICGF 332
P S G + T F+ SE ++ S + ++ ++ P S S CGF
Sbjct: 122 PKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPK-CGF 180
Query: 333 CQ-SSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSKCIEWAPQVYYAGDTVKNLKAE 391
C +E G LH N K + + + + + + +K + E
Sbjct: 181 CHVGEEENEARG-KLHIFNAKKAAAHY--KCMLFSSGTVQLTTTSRAEFGDFDIKTVLQE 237
Query: 392 LARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALEISECRWDTEN-----FLVLCPVH 446
+ RG ++KC+ C GA +GC +++C ++YH C ++ + ++ EN + + C H
Sbjct: 238 IKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQ-DKAKY-IENMSRGIYKLYCKNH 295
Query: 447 SSVKFPIEKSGHRSIRNRAA----PLQLTPQE 474
S E+ R ++R QLT Q+
Sbjct: 296 SGNDERDEEDEERESKSRGKVEIDQQQLTQQQ 327
Score = 39 (18.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 29 LVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCN 63
L+ QK+A KC +C + CD C+
Sbjct: 32 LISENQKVAAHHKCMMCSLCHCPGATIGCDVKTCH 66
>UNIPROTKB|E7EN90 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0007420 GO:GO:0032355 GO:GO:0005759
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0008270
GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000794 InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 IPI:IPI00945744 SMR:E7EN90
Ensembl:ENST00000461221 Ensembl:ENST00000461798 Uniprot:E7EN90
Length = 63
Score = 103 (41.3 bits), Expect = 0.00015, P = 0.00015
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPL 78
+QK+ L+CP+CL L P+ CDHIFC C+ + + S+CPL
Sbjct: 18 MQKI---LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPL 63
>UNIPROTKB|Q3B891 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0007420 GO:GO:0032355
GO:GO:0005759 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000794 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820 EMBL:AC060780
EMBL:AC135721 UniGene:Hs.194143 HGNC:HGNC:1100 ChiTaRS:BRCA1
GO:GO:0043009 GO:GO:0009048 GO:GO:0007098 HOGENOM:HOG000142477
HOVERGEN:HBG061757 EMBL:BC106745 IPI:IPI00946108 SMR:Q3B891
STRING:Q3B891 Ensembl:ENST00000494123 Uniprot:Q3B891
Length = 473
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 34/120 (28%), Positives = 56/120 (46%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
+QK+ L+CP+CL L P+ CDHIFC C+ + + S+CPLCK+ T L+
Sbjct: 18 MQKI---LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 90 PLA-FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSFNNSA 148
F + + + K + A L+ S +E+NS + + + + N A
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRA 134
>UNIPROTKB|E1BSV9 [details] [associations]
symbol:LOC416146 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104271 EMBL:AADN02074984
IPI:IPI00580824 Ensembl:ENSGALT00000001825 OMA:QINTEEL
Uniprot:E1BSV9
Length = 314
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 32/89 (35%), Positives = 44/89 (49%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIP---RSAQCES---ECPLCKS-QCTY 85
L+ L EL C +CL+++ P+ L C H FC CI RS C CPLC + +
Sbjct: 7 LEGLEEELTCSVCLDIYRNPVSLGCGHSFCEECIQGVLRSQHCPQGLFSCPLCSALEAPP 66
Query: 86 ADLRPLAFLENIIAIYKGLDASPSSNLLQ 114
L+P L +I+ K LD S S L+
Sbjct: 67 TKLQPNIQLRSIVQ--KFLDTSEQSAALE 93
>MGI|MGI:2664992 [details] [associations]
symbol:Trim50 "tripartite motif-containing 50" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016235 "aggresome" evidence=IDA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070201 "regulation of establishment of protein localization"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 MGI:MGI:2664992
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 GeneTree:ENSGT00680000099496 CTD:135892
eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024 EMBL:AY081947
IPI:IPI00408393 RefSeq:NP_839971.1 UniGene:Mm.261834
ProteinModelPortal:Q810I2 SMR:Q810I2 STRING:Q810I2
PhosphoSite:Q810I2 PRIDE:Q810I2 Ensembl:ENSMUST00000065785
GeneID:215061 KEGG:mmu:215061 UCSC:uc008zyf.1 NextBio:374596
CleanEx:MM_TRIM50 Genevestigator:Q810I2 Uniprot:Q810I2
Length = 483
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 31 LHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQ-CESE--CPLCKSQCTYAD 87
L + +L +L+CP+CL +F PL+L C H +C C+ +Q +SE CP+C+ +
Sbjct: 5 LTVPELQDQLQCPICLEVFKEPLMLQCGHSYCKDCLDNLSQHLDSELCCPVCRQSVDCSS 64
Query: 88 LRPLAFLENII 98
P L +I
Sbjct: 65 SPPNVSLARVI 75
>RGD|631346 [details] [associations]
symbol:Trim50 "tripartite motif-containing 50" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016235 "aggresome" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0070201 "regulation of establishment of protein localization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 RGD:631346
Prosite:PS00518 GO:GO:0043231 GO:GO:0005737 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
CTD:135892 eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024
OrthoDB:EOG4RNB87 EMBL:AY081950 IPI:IPI00389366 RefSeq:NP_851594.1
UniGene:Rn.43040 ProteinModelPortal:Q810I1 PRIDE:Q810I1
GeneID:288596 KEGG:rno:288596 UCSC:RGD:631346 InParanoid:Q810I1
NextBio:628389 Genevestigator:Q810I1 Uniprot:Q810I1
Length = 483
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 27/83 (32%), Positives = 44/83 (53%)
Query: 31 LHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR-SAQCESE--CPLCKSQCTYAD 87
L + +L +L+CP+CL +F PL+L C H +C +C+ S +SE CP+C+ +
Sbjct: 5 LTVPELQDQLQCPICLEVFKEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVCRQSVDCSS 64
Query: 88 LRPLAFLENII-AIYKGLDASPS 109
P L +I A+ D P+
Sbjct: 65 SPPNVSLARVIDALRLPGDTEPT 87
>UNIPROTKB|Q810I1 [details] [associations]
symbol:Trim50 "E3 ubiquitin-protein ligase TRIM50"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 RGD:631346
Prosite:PS00518 GO:GO:0043231 GO:GO:0005737 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
CTD:135892 eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024
OrthoDB:EOG4RNB87 EMBL:AY081950 IPI:IPI00389366 RefSeq:NP_851594.1
UniGene:Rn.43040 ProteinModelPortal:Q810I1 PRIDE:Q810I1
GeneID:288596 KEGG:rno:288596 UCSC:RGD:631346 InParanoid:Q810I1
NextBio:628389 Genevestigator:Q810I1 Uniprot:Q810I1
Length = 483
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 27/83 (32%), Positives = 44/83 (53%)
Query: 31 LHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR-SAQCESE--CPLCKSQCTYAD 87
L + +L +L+CP+CL +F PL+L C H +C +C+ S +SE CP+C+ +
Sbjct: 5 LTVPELQDQLQCPICLEVFKEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVCRQSVDCSS 64
Query: 88 LRPLAFLENII-AIYKGLDASPS 109
P L +I A+ D P+
Sbjct: 65 SPPNVSLARVIDALRLPGDTEPT 87
>UNIPROTKB|F1PCF0 [details] [associations]
symbol:PHF17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR019542 Pfam:PF10513 CTD:79960 KO:K11347
OMA:EAHEGAC GeneTree:ENSGT00690000101689 EMBL:AAEX03011773
RefSeq:XP_003639753.1 RefSeq:XP_848505.3 Ensembl:ENSCAFT00000006136
GeneID:483830 KEGG:cfa:483830 Uniprot:F1PCF0
Length = 844
Score = 129 (50.5 bits), Expect = 0.00016, P = 0.00016
Identities = 40/126 (31%), Positives = 59/126 (46%)
Query: 361 RSHVIHVHSKCIEWAPQVYYAG-DTVKNL-KAELARGSK--LKCSRCGLK-GAALGCYVR 415
RS VH C W P+V + ++ + K S+ L CS C K GA++ C V+
Sbjct: 272 RSGTKWVHVSCALWIPEVSIGSPEKMEPITKVSHIPSSRWALVCSLCNEKFGASIQCSVK 331
Query: 416 SCRRSYHVPCA----LEISE--CRWDTENFLVLCPVHSSVKFPIEKSGHRSIRNRAAPLQ 469
+CR ++HV CA LE+ D F CP HSS + P E G + + A +
Sbjct: 332 NCRTAFHVTCAFDRGLEMKTILAENDEVKFKSYCPKHSSHRKPEESLGEGAAQENGAS-E 390
Query: 470 LTPQEP 475
+P+ P
Sbjct: 391 CSPRNP 396
>MGI|MGI:1918178 [details] [associations]
symbol:Trim69 "tripartite motif-containing 69" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:1918178 Pfam:PF00097 Prosite:PS00518
GO:GO:0005737 GO:GO:0006915 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
EMBL:AL845457 InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407
SMART:SM00589 HSSP:Q9CQJ4 HOGENOM:HOG000234133 HOVERGEN:HBG001357
GeneTree:ENSGT00700000104222 CTD:140691 eggNOG:NOG296667 KO:K12034
EMBL:AF334958 EMBL:BC050815 IPI:IPI00330670 RefSeq:NP_536771.2
UniGene:Mm.379188 ProteinModelPortal:Q80X56 SMR:Q80X56
IntAct:Q80X56 STRING:Q80X56 PhosphoSite:Q80X56 PaxDb:Q80X56
PRIDE:Q80X56 Ensembl:ENSMUST00000036089 GeneID:70928 KEGG:mmu:70928
UCSC:uc008mah.1 InParanoid:Q80X56 OMA:TEELAIY OrthoDB:EOG4KSPJQ
NextBio:332607 Bgee:Q80X56 CleanEx:MM_TRIM69 Genevestigator:Q80X56
Uniprot:Q80X56
Length = 500
Score = 133 (51.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 30/80 (37%), Positives = 40/80 (50%)
Query: 28 PLVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESE---CPLCKSQCT 84
P + +Q L EL CPLC + F PL+L C H FC CI + S+ CP CK C
Sbjct: 28 PSKVVIQDLTTELHCPLCNDWFRDPLMLTCGHNFCQDCIQSFWKVHSKETFCPDCKMLCQ 87
Query: 85 YADLRPLAFLENIIAIYKGL 104
Y++ LE ++ K L
Sbjct: 88 YSNCTFNLVLEKLVEKIKKL 107
Score = 38 (18.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 661 EGSLIGEEVSTIWNRLNE----AEELASKIGCRV 690
EG L+ EE+ N++ E A+++ + I R+
Sbjct: 229 EGKLLNEEMEVNLNQIQEQCLVAKDMLATIQARM 262
>UNIPROTKB|G3X763 [details] [associations]
symbol:G3X763 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] GO:GO:0005730
InterPro:IPR011031 PROSITE:PS51008 GeneTree:ENSGT00530000063780
OMA:MARGIYK EMBL:DAAA02067572 EMBL:DAAA02067573 EMBL:DAAA02067574
Ensembl:ENSBTAT00000020218 Uniprot:G3X763
Length = 325
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 39/177 (22%), Positives = 74/177 (41%)
Query: 254 SSSETAGSFRDSKRLKGFNYGPDSVGVKSSGHSQSTVFR--SESLMASKSDSELKSVAAL 311
SS++ SF + + L+ + P S G + T F+ SE ++ S + ++
Sbjct: 140 SSADLEESFNEHE-LEPSS--PKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSS 196
Query: 312 ASEKMPPISIDSCANNYICGFCQSSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSKC 371
++ P S S CGFC LH N K + + +
Sbjct: 197 YRDRSPHRSSPSDTRPK-CGFCHVGEEENQARGKLHIFNAKKAAAHY--KCMLFSSGTVQ 253
Query: 372 IEWAPQVYYAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCALE 428
+ + + +K + E+ RG ++KC+ C GA +GC +++C ++YH C ++
Sbjct: 254 LTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQ 310
>UNIPROTKB|B2RNG4 [details] [associations]
symbol:TRIM6-TRIM34 "TRIM6-TRIM34 readthrough transcript"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 EMBL:AC015691 KO:K11999
UniGene:Hs.729048 HGNC:HGNC:10063 EMBL:BC136871 EMBL:BC140722
IPI:IPI00854740 RefSeq:NP_001003819.1 ProteinModelPortal:B2RNG4
SMR:B2RNG4 PRIDE:B2RNG4 Ensembl:ENST00000337072
Ensembl:ENST00000354852 GeneID:445372 KEGG:hsa:445372
UCSC:uc001mbf.3 CTD:445372 HGNC:HGNC:33440 OMA:ACITQNS
GenomeRNAi:445372 NextBio:111386 ArrayExpress:B2RNG4 Bgee:B2RNG4
Uniprot:B2RNG4
Length = 842
Score = 131 (51.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 27 NPLVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCI-PRSAQC------ESECPLC 79
+P+++ +++ E+ CP+CL L + PL + C H FC +CI P + E CP+C
Sbjct: 31 SPVLVDIRE---EVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVC 87
Query: 80 KSQCTYADLRPLAFLENIIAIYKGLDASPSSNL 112
++ +LRP L NI+ + + P L
Sbjct: 88 QTSYQPGNLRPNRHLANIVRRLREVVLGPGKQL 120
Score = 46 (21.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 384 TVKNLKAELARGSKLKCSRCGL 405
TV N +A + G K C CG+
Sbjct: 394 TVSNKEAVTSMGGKSSCPVCGI 415
>UNIPROTKB|Q587N7 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9534 "Chlorocebus aethiops" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY669399 EMBL:AY625002 EMBL:AY625003
EMBL:AB210050 EMBL:AB210051 EMBL:AY843504 ProteinModelPortal:Q587N7
SMR:Q587N7 PRIDE:Q587N7 Uniprot:Q587N7
Length = 515
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRS-------AQCESECPLCKSQCTYADLRPL 91
E+ CP+CL L + PL LPC H FC +CI + + E CP+C+ +++P
Sbjct: 12 EVTCPICLELLTEPLSLPCGHSFCQACITANHKESMLYKEEERSCPVCRISYQPENIQPN 71
Query: 92 AFLENIIAIYKGLDASP 108
+ NI+ + + SP
Sbjct: 72 RHVANIVEKLREVKLSP 88
>UNIPROTKB|Q5C8U3 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:60712 "Chlorocebus tantalus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0051607 "defense response to virus" evidence=TAS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0051607
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HSSP:Q14134 GO:GO:0031664 EMBL:AY593973 EMBL:AY740613 EMBL:DQ437606
ProteinModelPortal:Q5C8U3 SMR:Q5C8U3 Uniprot:Q5C8U3
Length = 515
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRS-------AQCESECPLCKSQCTYADLRPL 91
E+ CP+CL L + PL LPC H FC +CI + + E CP+C+ +++P
Sbjct: 12 EVTCPICLELLTEPLSLPCGHSFCQACITANHKESMLYKEEERSCPVCRISYQPENIQPN 71
Query: 92 AFLENIIAIYKGLDASP 108
+ NI+ + + SP
Sbjct: 72 RHVANIVEKLREVKLSP 88
>UNIPROTKB|Q58DB5 [details] [associations]
symbol:RAD18 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003034
InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800
SMART:SM00184 SMART:SM00513 SMART:SM00734 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 Gene3D:1.10.720.30 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HOVERGEN:HBG054721
GeneTree:ENSGT00390000011230 EMBL:DAAA02053765 EMBL:DAAA02053766
EMBL:DAAA02053767 EMBL:DAAA02053768 EMBL:DAAA02053769
EMBL:DAAA02053770 IPI:IPI00702052 UniGene:Bt.26308 EMBL:BT021682
STRING:Q58DB5 Ensembl:ENSBTAT00000066111 InParanoid:Q58DB5
Uniprot:Q58DB5
Length = 336
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 36/138 (26%), Positives = 69/138 (50%)
Query: 17 DSAANSKRSFNPLVLHLQKLALELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQCESE 75
DS A + + P + ++K+ L+C +C F+ +++P C H +C+ CI + +++
Sbjct: 2 DSLAEPR--WPPALAVMKKVDDLLRCGICFEYFNIAMMIPQCSHNYCSLCIRKFLSYKTQ 59
Query: 76 CPLCKSQCTYADLRPLAFLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLS 135
CP C T DL+ L+ ++ K L+ + ++LLQ ++ SSS ++L+
Sbjct: 60 CPTCCVTVTEPDLKNNRVLDELV---KNLNFA-RNHLLQ--FALESPPISAASSSSKNLA 113
Query: 136 ANTLVQVSFNNSACDGQK 153
V+F +S G K
Sbjct: 114 TKADTAVAFRHSLKQGSK 131
>UNIPROTKB|E1BTQ2 [details] [associations]
symbol:RNF8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016881 "acid-amino acid ligase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00400000022349
PANTHER:PTHR15067:SF3 OMA:VEMKEHR EMBL:AADN02011899 IPI:IPI00820679
Ensembl:ENSGALT00000035395 Uniprot:E1BTQ2
Length = 136
Score = 102 (41.0 bits), Expect = 0.00019, P = 0.00019
Identities = 24/76 (31%), Positives = 38/76 (50%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCESECPLCKSQCTYADLRPLAFLENII 98
EL+C +C F + L C H FC+ CI + + ECP+C+ + + R L L+N I
Sbjct: 8 ELQCTICSEHFIEAVTLNCAHSFCSYCIDEWTKRKVECPICRQEIK-SKTRSLV-LDNCI 65
Query: 99 -AIYKGLDASPSSNLL 113
+ + LD + L
Sbjct: 66 DRMVENLDVEMKEHRL 81
>UNIPROTKB|C9IZE0 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 OrthoDB:EOG4K3KX1 HGNC:HGNC:30834
HOGENOM:HOG000199013 IPI:IPI00945336 ProteinModelPortal:C9IZE0
SMR:C9IZE0 STRING:C9IZE0 Ensembl:ENST00000471155
ArrayExpress:C9IZE0 Bgee:C9IZE0 Uniprot:C9IZE0
Length = 114
Score = 102 (41.0 bits), Expect = 0.00019, P = 0.00019
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQ 71
EL CP+C ++F P +LPC H FC +C+ Q
Sbjct: 7 ELTCPICYSIFEDPRVLPCSHTFCRNCLENILQ 39
>UNIPROTKB|C9J9F0 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 HGNC:HGNC:30834 HOGENOM:HOG000199013 IPI:IPI00945495
ProteinModelPortal:C9J9F0 SMR:C9J9F0 STRING:C9J9F0
Ensembl:ENST00000494486 ArrayExpress:C9J9F0 Bgee:C9J9F0
Uniprot:C9J9F0
Length = 111
Score = 102 (41.0 bits), Expect = 0.00019, P = 0.00019
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQ 71
EL CP+C ++F P +LPC H FC +C+ Q
Sbjct: 7 ELTCPICYSIFEDPRVLPCSHTFCRNCLENILQ 39
>UNIPROTKB|F8WFA6 [details] [associations]
symbol:RAD18 "E3 ubiquitin-protein ligase RAD18"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC068312 EMBL:AC008151
EMBL:AC034186 HGNC:HGNC:18278 IPI:IPI00925824
ProteinModelPortal:F8WFA6 SMR:F8WFA6 Ensembl:ENST00000421052
ArrayExpress:F8WFA6 Bgee:F8WFA6 Uniprot:F8WFA6
Length = 126
Score = 102 (41.0 bits), Expect = 0.00019, P = 0.00019
Identities = 22/82 (26%), Positives = 43/82 (52%)
Query: 17 DSAANSKRSFNPLVLHLQKLALELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQCESE 75
DS A S+ + P + ++ + L+C +C F+ +++P C H +C+ CI + +++
Sbjct: 2 DSLAESR--WPPGLAVMKTIDDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQ 59
Query: 76 CPLCKSQCTYADLRPLAFLENI 97
CP C T DL+ L+ +
Sbjct: 60 CPTCCVTVTEPDLKNNRILDEL 81
>UNIPROTKB|F1PUG1 [details] [associations]
symbol:PHF11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 SMART:SM00249 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00530000063780 OMA:TLCSFQE
EMBL:AAEX03013106 EMBL:AAEX03013105 Ensembl:ENSCAFT00000037045
Uniprot:F1PUG1
Length = 346
Score = 122 (48.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 370 KCIEWAPQVYYAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVPCA 426
+C + P+ V+++K E+ RG KL C+ C +GA +GC V++C RSYH CA
Sbjct: 78 ECEDHDPRNQDRNFDVESVKKEIHRGRKLTCAFCNRRGATVGCDVKACNRSYHFFCA 134
Score = 44 (20.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 552 LKIDWIKACMEA--MNPVGEE 570
+KID++K C EA +N + EE
Sbjct: 231 VKIDFLKKCKEAGLLNDLFEE 251
>UNIPROTKB|G5E5Y3 [details] [associations]
symbol:G5E5Y3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
GeneTree:ENSGT00690000101646 EMBL:DAAA02040903
Ensembl:ENSBTAT00000040169 Uniprot:G5E5Y3
Length = 470
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 30/87 (34%), Positives = 45/87 (51%)
Query: 29 LVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR----SAQCESE---CPLCKS 81
+V++LQ E+ CP+CL L + PL L C H FC +CI S + E CP+C+
Sbjct: 5 IVVNLQG---EVTCPICLQLLTEPLSLDCGHSFCQACITANNLVSMNDQDEDRRCPVCRI 61
Query: 82 QCTYADLRPLAFLENIIAIYKGLDASP 108
+LRP + NI+ + + SP
Sbjct: 62 SYEPGNLRPNRHVANIVQRLREVKLSP 88
>FB|FBgn0086129 [details] [associations]
symbol:snama "something that sticks like glue" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0035736 "cell proliferation involved in compound
eye morphogenesis" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001841 InterPro:IPR001878
InterPro:IPR014891 Pfam:PF08783 PROSITE:PS50089 PROSITE:PS50158
PROSITE:PS51282 SMART:SM00184 SMART:SM00343 EMBL:AE013599
GO:GO:0005634 GO:GO:0006915 GO:GO:0022008 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:4.10.60.10 eggNOG:COG5222 GeneTree:ENSGT00610000086096
KO:K10624 EMBL:AF132177 RefSeq:NP_611884.1 UniGene:Dm.3196
SMR:Q9XZ21 IntAct:Q9XZ21 MINT:MINT-916562
EnsemblMetazoa:FBtr0072249 GeneID:37857 KEGG:dme:Dmel_CG3231
UCSC:CG3231-RA CTD:37857 FlyBase:FBgn0086129 InParanoid:Q9XZ21
OMA:FNRIMKE OrthoDB:EOG4GB5NG GenomeRNAi:37857 NextBio:805727
GO:GO:0035736 Uniprot:Q9XZ21
Length = 1231
Score = 135 (52.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 40/167 (23%), Positives = 73/167 (43%)
Query: 17 DSAANSKRSFNPLVLHLQKLALELKCPLCLNLFSRPLLLPC-DHIFCNSCIPRSA-QCE- 73
D+A N F + Q++ +L C +C ++F +++PC FC+ C+ S + E
Sbjct: 192 DAAENESADFVLPAVQNQEIPEDLICGICRDIFVDAVMIPCCGSSFCDDCVRTSLLESED 251
Query: 74 SECPLCKSQ-CTYADLRPLAFLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQ 132
SECP CK + C+ L P FL N + +K + + + +P E+ +
Sbjct: 252 SECPDCKEKNCSPGSLIPNRFLRNSVNAFKN-ETGYNKSAAKPA----AVKNEEKPPVEK 306
Query: 133 SLSANTLVQVSFNNSACDGQKGKGFELTGMGENKRDGGQNPNSAQPS 179
+ + +V + +K K E G K + + P + +PS
Sbjct: 307 EVEKKPVAEVEPEETEVKPEKQKESETNGSNPPKSESPEPPATTEPS 353
Score = 45 (20.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 14/77 (18%), Positives = 33/77 (42%)
Query: 163 GENKRDGGQNPNSAQPSSHTQAGGI-RDCRPAQIDINQLDQLSPCSPPSFGDIKGSDNES 221
G++ + G+N + P ++ I ++ +P + L + + P + ES
Sbjct: 709 GDSSKKRGENRHEEAPRKRHRSRSISKEPKPNDSNYRSLTPPAKITTPKMTAAQLRQRES 768
Query: 222 NDQGGELSPESYLANRS 238
+ + E S + YL ++
Sbjct: 769 SPKTPEKSHDDYLTAKA 785
Score = 42 (19.8 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 25/106 (23%), Positives = 40/106 (37%)
Query: 215 KGSDNESNDQGGELSPESYLANRSVKRGFDDRTRQE--HRLSSSETAGSFRDSKRLKGFN 272
+ SD+++N + NRS R RQE ++ SS E R +K
Sbjct: 1047 RSSDDDANRGRSDRHGSRKRDNRSRDRAAPSEKRQERSYKRSSPEDDKLRRQNKEQSESK 1106
Query: 273 YGPDSVGVKSSGHSQSTVFRSESLMASKSDSEL-KSVAALASEKMP 317
+G K ++ R + SDS + SV A+ + P
Sbjct: 1107 HG------KHDQNNSDDSDRRAAKNTKSSDSRVVSSVTAVVAPPKP 1146
Score = 40 (19.1 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 14/47 (29%), Positives = 18/47 (38%)
Query: 244 DDRTRQEHRLSSSETAGSFRDSKRLKGFNYGPDSVG--VKSSGHSQS 288
D R R R R + + N G S G +K SGH +S
Sbjct: 602 DKRPRSRERKREHSYERHIRHPRSSRQPNDGSKSPGGRIKRSGHRRS 648
>UNIPROTKB|I7GGX8 [details] [associations]
symbol:TRIM31 "Tripartite motif protein 31 isoform beta"
species:9823 "Sus scrofa" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00700000104499
EMBL:CT737425 EMBL:AB158487 UniGene:Ssc.26008 UniGene:Ssc.83065
ProteinModelPortal:I7GGX8 Ensembl:ENSSSCT00000035521 Uniprot:I7GGX8
Length = 411
Score = 124 (48.7 bits), Expect = 0.00020, P = 0.00020
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 35 KLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQ-CES--ECPLCKSQCTYADLRPL 91
KL E+ CP+C+++ P + C H FC CI RS + +S +CPLC +RP
Sbjct: 9 KLQEEVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCNKIVKRDTIRPN 68
Query: 92 AFLENIIAIYKGLDAS 107
L N++ + +D S
Sbjct: 69 WLLVNLVEKIQAMDPS 84
>UNIPROTKB|F1NWA3 [details] [associations]
symbol:F1NWA3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 GeneTree:ENSGT00440000033329
EMBL:AADN02028660 IPI:IPI00587294 Ensembl:ENSGALT00000006484
OMA:ILEAEGM Uniprot:F1NWA3
Length = 579
Score = 126 (49.4 bits), Expect = 0.00021, P = 0.00021
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 13 STMADSAANSKRSFN-PLVLHLQKLAL--ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRS 69
S+ +D AN + + +L L++L +L+C LC+ +F P+ PC H FC C+ R
Sbjct: 256 SSASDPPANEEETAAMDNLLPLEELLSISDLECSLCIRMFFEPVTTPCGHTFCKECLERC 315
Query: 70 AQCESECPLCK 80
CPLCK
Sbjct: 316 LDHRPNCPLCK 326
>UNIPROTKB|F1NW66 [details] [associations]
symbol:Gga.49064 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0035097 "histone methyltransferase complex" evidence=IEA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964
Pfam:PF05965 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00541 SMART:SM00542 Pfam:PF00505 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 SMART:SM00398 SUPFAM:SSF47095
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GO:GO:0051568 GeneTree:ENSGT00690000101661
OMA:VDPYERP EMBL:AADN02000310 EMBL:AADN02000311 EMBL:AADN02000312
IPI:IPI00593571 Ensembl:ENSGALT00000010124 Uniprot:F1NW66
Length = 4880
Score = 138 (53.6 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 367 VHSKCIEWAPQVY--YAGDTVKNLKAELARGSKLKCSRCGLKGAALGCYVRSCRRSYHVP 424
VH C W+ +VY AG + N++ L RG ++KC C GA GC+ C YH
Sbjct: 4397 VHLNCALWSTEVYETQAGALI-NVELALRRGLQMKCMFCHKMGATSGCHRLRCTNIYHFT 4455
Query: 425 CALEISECRWDTENFLVLCPVH 446
CA++ ++C + + + LCP+H
Sbjct: 4456 CAIK-AQCMFFKDKTM-LCPMH 4475
Score = 54 (24.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 322 DSC---ANNYICGFCQSSRISEVTGLMLHYANGKPVVGEEADRSHVIHVHSK 370
DSC +N C FC + + MLH K + E DRS I + S+
Sbjct: 405 DSCYQQQDNLSCPFCDKLCLQDFQKDMLHCHMCKRWIHMECDRSPGIELESQ 456
Score = 52 (23.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 26/106 (24%), Positives = 44/106 (41%)
Query: 173 PNSAQPSSHTQAGGIRDCR-PAQIDIN---QLDQLSPCSPPSFGDIKGSDNE--SNDQGG 226
P A+P H G + PA ++ Q DQ++P +PP+ I+ N ++ G
Sbjct: 2564 PRQAEPLRHNSQGMPNQLQMPAGLEHMSQPQQDQINPDNPPALV-IRSISNPPVADAFSG 2622
Query: 227 ELSPESYLANRSVKRGFDDRTRQ--EHRLSSSETAGSFRDSKRLKG 270
P S ++ S +++ E +L + A D K L G
Sbjct: 2623 PSLPTSAPSDESANMQIPNQSSDGLEEKLDPDDPAVKDLDVKDLDG 2668
Score = 49 (22.3 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 27/125 (21%), Positives = 55/125 (44%)
Query: 192 PAQIDIN-QLDQLSPCSPPSFGDIKGSDNESNDQGGELSPESYLANRSVKRGFDDRTRQE 250
P Q +++ + D+ P +P ++K E++ + P++ N+S + +D+ +
Sbjct: 3656 PKQPNVSTETDRAKPGTPTGIQEVKLEKAETDQCSDQTEPKT--ENQSTVKVEEDKVPSQ 3713
Query: 251 HRLSSSETAGSFRDSKRLKGFNYGPDSVGVKSSGHSQSTVFRSESLMASKSDSELKSVAA 310
SS+++ KG +S G + H +S SL+ KS+S ++
Sbjct: 3714 PP-SSAQSPAQPASVPAAKG-----ES-GNELLKHLLKNK-KSSSLLNQKSESSCRTEEE 3765
Query: 311 LASEK 315
A EK
Sbjct: 3766 AAGEK 3770
>UNIPROTKB|Q1ACD6 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9590 "Symphalangus syndactylus" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0002218 "activation of
innate immune response" evidence=ISS] [GO:0002221 "pattern
recognition receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
GO:GO:0031664 EMBL:AY843509 EMBL:DQ229284 ProteinModelPortal:Q1ACD6
SMR:Q1ACD6 Uniprot:Q1ACD6
Length = 494
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQC------ESECPLCKSQCTYADLRPLA 92
E+ CP+CL L ++PL L C H FC +C+ + + E CP+C+ + +++P
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKTSMPDEGERSCPVCRISYQHKNIQPNR 71
Query: 93 FLENIIAIYKGLDASP 108
+ NI+ + + SP
Sbjct: 72 HVANIVEKLREVKLSP 87
>UNIPROTKB|Q1ACD7 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:61853 "Nomascus leucogenys" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
GO:GO:0031664 EMBL:AY899858 EMBL:AY899852 EMBL:AY899853
EMBL:AY899854 EMBL:AY899855 EMBL:AY899856 EMBL:AY899857
EMBL:DQ229283 ProteinModelPortal:Q1ACD7 SMR:Q1ACD7 Uniprot:Q1ACD7
Length = 494
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQC------ESECPLCKSQCTYADLRPLA 92
E+ CP+CL L ++PL L C H FC +C+ + + E CP+C+ + +++P
Sbjct: 12 EVTCPICLELLTQPLSLDCGHSFCQACLTANHKTSMPDEGERSCPVCRISYQHKNIQPNR 71
Query: 93 FLENIIAIYKGLDASP 108
+ NI+ + + SP
Sbjct: 72 HVANIVEKLREVKLSP 87
>UNIPROTKB|Q5BN31 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:39432 "Saimiri boliviensis boliviensis" [GO:0000932
"cytoplasmic mRNA processing body" evidence=ISS] [GO:0002218
"activation of innate immune response" evidence=ISS] [GO:0002221
"pattern recognition receptor signaling pathway" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0008329 "pattern recognition receptor activity" evidence=ISS]
[GO:0031664 "regulation of lipopolysaccharide-mediated signaling
pathway" evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY740614 EMBL:AY928202
ProteinModelPortal:Q5BN31 SMR:Q5BN31 PRIDE:Q5BN31 Uniprot:Q5BN31
Length = 494
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 26/66 (39%), Positives = 35/66 (53%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSA------QCESECPLCKSQCTYADLRPLA 92
E+ CP+CL L + PL L C H FC +CI + Q E CPLC+ +LRP
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKESMLHQGERSCPLCRLPYQSENLRPNR 71
Query: 93 FLENII 98
L +I+
Sbjct: 72 HLASIV 77
>UNIPROTKB|Q5D7I0 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9521 "Saimiri sciureus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0051607 "defense response to virus" evidence=TAS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0051607
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843517
ProteinModelPortal:Q5D7I0 SMR:Q5D7I0 Uniprot:Q5D7I0
Length = 494
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 26/66 (39%), Positives = 35/66 (53%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSA------QCESECPLCKSQCTYADLRPLA 92
E+ CP+CL L + PL L C H FC +CI + Q E CPLC+ +LRP
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKESMLHQGERSCPLCRLPYQSENLRPNR 71
Query: 93 FLENII 98
L +I+
Sbjct: 72 HLASIV 77
>UNIPROTKB|Q3MJK3 [details] [associations]
symbol:TRIM5 "Tripartite motif protein TRIM5" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00690000101646 HOVERGEN:HBG001357
HOGENOM:HOG000234134 OrthoDB:EOG4229JJ eggNOG:NOG253216 KO:K10648
IPI:IPI00838178 EMBL:DAAA02040905 EMBL:AY970972 EMBL:DQ381151
RefSeq:NP_001029970.1 UniGene:Bt.107577 SMR:Q3MJK3
Ensembl:ENSBTAT00000005971 GeneID:616948 KEGG:bta:616948
InParanoid:Q3MJK3 OMA:KEERTSW NextBio:20900407 Uniprot:Q3MJK3
Length = 498
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRS-------AQCESECPLCKSQCTY 85
L + E+ CP+CL L + PL L C H FC +CI + + + CP+C+
Sbjct: 6 LMNIQEEVTCPICLELLTEPLSLDCGHSFCQACITANNKESIIGQEGKRSCPVCRVSFEP 65
Query: 86 ADLRPLAFLENIIAIYKGLDASP 108
+LRP + NI+ + + SP
Sbjct: 66 GNLRPNRHVANIVQRLREVKVSP 88
>UNIPROTKB|P14373 [details] [associations]
symbol:TRIM27 "Zinc finger protein RFP" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0070206
"protein trimerization" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=TAS] [GO:0046872 "metal ion binding"
evidence=TAS] [GO:0016020 "membrane" evidence=TAS] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0002820 "negative regulation of
adaptive immune response" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0006469
"negative regulation of protein kinase activity" evidence=IDA]
[GO:0090281 "negative regulation of calcium ion import"
evidence=IMP] [GO:0032720 "negative regulation of tumor necrosis
factor production" evidence=IMP] [GO:1900041 "negative regulation
of interleukin-2 secretion" evidence=IMP] [GO:0072643
"interferon-gamma secretion" evidence=IMP] [GO:0004714
"transmembrane receptor protein tyrosine kinase activity"
evidence=TAS] [GO:0007283 "spermatogenesis" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0031965 "nuclear membrane" evidence=IDA]
[GO:0045814 "negative regulation of gene expression, epigenetic"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643
PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0005654 GO:GO:0005887 EMBL:CH471081 GO:GO:0006469
GO:GO:0046872 GO:GO:0003677 GO:GO:0016605 GO:GO:0008283
GO:GO:0004714 GO:GO:0008270 GO:GO:0031965 GO:GO:0007283
GO:GO:0006351 GO:GO:0003676 GO:GO:0000122 InterPro:IPR008985
SUPFAM:SSF49899 GO:GO:0032720 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0070206 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 GO:GO:0072643
MIM:188550 Orphanet:146 GO:GO:1900041 GO:GO:0090281 GO:GO:0045814
HOVERGEN:HBG001357 GO:GO:0002820 EMBL:J03407 EMBL:AF230393
EMBL:AF230394 EMBL:AL662859 EMBL:AL662871 EMBL:BX000360
EMBL:BX537153 EMBL:BX005144 EMBL:BX119924 EMBL:CR759942 EMBL:Z84474
EMBL:Z84476 EMBL:BC013580 EMBL:BC066924 IPI:IPI00412657
IPI:IPI00426252 PIR:A28101 RefSeq:NP_006501.1 UniGene:Hs.440382
ProteinModelPortal:P14373 SMR:P14373 IntAct:P14373
MINT:MINT-1409274 STRING:P14373 PhosphoSite:P14373 DMDM:132517
PaxDb:P14373 PRIDE:P14373 DNASU:5987 Ensembl:ENST00000377194
Ensembl:ENST00000377199 Ensembl:ENST00000400720
Ensembl:ENST00000412687 Ensembl:ENST00000417660
Ensembl:ENST00000427689 Ensembl:ENST00000431123
Ensembl:ENST00000435528 Ensembl:ENST00000437160
Ensembl:ENST00000452265 GeneID:5987 KEGG:hsa:5987 UCSC:uc003nlr.3
UCSC:uc003nls.3 CTD:5987 GeneCards:GC06M028870 HGNC:HGNC:9975
HPA:HPA048684 MIM:602165 neXtProt:NX_P14373 PharmGKB:PA162406956
eggNOG:NOG252602 InParanoid:P14373 KO:K12009 OMA:FSGHVGS
OrthoDB:EOG4BVRTF PhylomeDB:P14373 ChiTaRS:TRIM27 GenomeRNAi:5987
NextBio:23317 ArrayExpress:P14373 Bgee:P14373 CleanEx:HS_TRIM27
Genevestigator:P14373 GermOnline:ENSG00000204713 Uniprot:P14373
Length = 513
Score = 125 (49.1 bits), Expect = 0.00022, P = 0.00022
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 36 LALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLRPLA 92
L E CP+CL F+ P++L C H C +C+ R +A+ CP C+ +RP
Sbjct: 10 LQQETTCPVCLQYFAEPMMLDCGHNICCACLARCWGTAETNVSCPQCRETFPQRHMRPNR 69
Query: 93 FLENIIAIYKGL 104
L N+ + K L
Sbjct: 70 HLANVTQLVKQL 81
>UNIPROTKB|E1B7M2 [details] [associations]
symbol:TRIM31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104499 EMBL:DAAA02055413
IPI:IPI00717514 Ensembl:ENSBTAT00000005888 Uniprot:E1B7M2
Length = 341
Score = 123 (48.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 35 KLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCES---ECPLCKSQCTYADLRPL 91
KL E+ CP+CL++ P + C H FC SCI +S + +CPLC + P
Sbjct: 9 KLQEEMICPICLDILQDPATIDCGHNFCLSCITQSGEAADSVLKCPLCNKIVKRDTITPN 68
Query: 92 AFLENIIAIYKGLDAS 107
L N++ + +D S
Sbjct: 69 WLLVNLVEKIQAMDPS 84
Score = 42 (19.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 28/123 (22%), Positives = 47/123 (38%)
Query: 498 EEKLLLVRFGNMIGVPVSKFWKPNVTHVIAATDAKGSCTRTLKVLMAILNGNWVLKIDWI 557
EEK L+ N +G +SK K VT + + +LK + G + I I
Sbjct: 194 EEKSFLLSRINWLGQEISKGEKLYVTSTKSQLNYLRKLKDSLKSRQCLPPGQLLQDIK-I 252
Query: 558 KACM-EAMNPVGEEPYEINLDNHGCEEGPKTGRL-RALNKAPKLFDGLSFYFSGNFMLGY 615
C EA + P ++L+ + + L ++L K + S F+ G
Sbjct: 253 ALCRSEAFRFLNPTPVSMDLEKKLSDIKSRHDSLTKSLKKFKDILQADSKKDKSKFLSGL 312
Query: 616 KED 618
E+
Sbjct: 313 SEE 315
>UNIPROTKB|K7GKN4 [details] [associations]
symbol:TRIM27 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR020457 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Pfam:PF00097 Prosite:PS00518 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104307 EMBL:FP085562
Ensembl:ENSSSCT00000035675 Uniprot:K7GKN4
Length = 334
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 24/72 (33%), Positives = 35/72 (48%)
Query: 36 LALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLRPLA 92
L E CP+CL F P++L C H C +C+ R +A+ CP C+ +RP
Sbjct: 10 LQQETTCPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRETFPQRHMRPNR 69
Query: 93 FLENIIAIYKGL 104
L N+ + K L
Sbjct: 70 HLANVTQLVKQL 81
>UNIPROTKB|E1BQF7 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0001702 "gastrulation with mouth forming second"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0035102
"PRC1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0071339 "MLL1 complex"
evidence=IEA] [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 KO:K10695 OMA:MELYFAP CTD:6045
EMBL:AADN02034211 IPI:IPI00572800 RefSeq:XP_422295.2
ProteinModelPortal:E1BQF7 Ensembl:ENSGALT00000007706 GeneID:424452
KEGG:gga:424452 NextBio:20826782 Uniprot:E1BQF7
Length = 336
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 44/178 (24%), Positives = 78/178 (43%)
Query: 29 LVLHLQKLALELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQC-ESECPLCKSQC-TY 85
+V+ + L EL CP+CL++ + C H FC CI + + ECP C+ + +
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 86 ADLRPLAFLENIIA-IYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSF 144
LRP + +I+ IY D + + V + +H + S S+ +Q +
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYEAHQ--ERVLARISKHNNQQALS-HSIEEGLKIQ-AM 153
Query: 145 NNSACDGQKGKGFELTGMGENKRDGGQNPNSAQPSSHT-QAGGIRDCRPAQIDINQLD 201
N Q+GK ++ G D G + + + S+H+ Q G + R D + L+
Sbjct: 154 NRL----QRGKKQQIEN-GSGAEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGLE 206
>UNIPROTKB|A6QLQ0 [details] [associations]
symbol:RNF2 "RNF2 protein" species:9913 "Bos taurus"
[GO:0071535 "RING-like zinc finger domain binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0035102 "PRC1 complex"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0009948
"anterior/posterior axis specification" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0000278
"mitotic cell cycle" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0000122
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0009948 GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907
GO:GO:0071339 GO:GO:0000278 GO:GO:0035518 GO:GO:0035102
GO:GO:0001739 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP
CTD:6045 OrthoDB:EOG4R7VB1 EMBL:DAAA02043606 EMBL:BC148044
IPI:IPI00867396 RefSeq:NP_001094673.1 UniGene:Bt.102990 SMR:A6QLQ0
STRING:A6QLQ0 Ensembl:ENSBTAT00000000025 GeneID:540090
KEGG:bta:540090 InParanoid:A6QLQ0 NextBio:20878411 Uniprot:A6QLQ0
Length = 336
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 44/178 (24%), Positives = 78/178 (43%)
Query: 29 LVLHLQKLALELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQC-ESECPLCKSQC-TY 85
+V+ + L EL CP+CL++ + C H FC CI + + ECP C+ + +
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 86 ADLRPLAFLENIIA-IYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSF 144
LRP + +I+ IY D + + V + +H + S S+ +Q +
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYEAHQ--ERVLARINKHNNQQALS-HSIEEGLKIQ-AM 153
Query: 145 NNSACDGQKGKGFELTGMGENKRDGGQNPNSAQPSSHT-QAGGIRDCRPAQIDINQLD 201
N Q+GK ++ G D G + + + S+H+ Q G + R D + L+
Sbjct: 154 NRL----QRGKKQQIEN-GSGAEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGLE 206
>UNIPROTKB|Q99496 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000278 "mitotic cell cycle" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0001739
"sex chromatin" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071339 "MLL1 complex"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031519 "PcG
protein complex" evidence=IDA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IDA] [GO:0035102 "PRC1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0071535
"RING-like zinc finger domain binding" evidence=IPI] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 EMBL:CH471067 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009948 GO:GO:0016604 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278 CleanEx:HS_BAP1
GO:GO:0035518 GO:GO:0035102 PDB:2H0D PDB:3RPG PDBsum:2H0D
PDBsum:3RPG PDB:3GS2 PDBsum:3GS2 GO:GO:0001739 EMBL:AL109865
eggNOG:NOG324386 HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695
OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1 EMBL:Y10571 EMBL:AF141327
EMBL:AK314793 EMBL:BC012583 IPI:IPI00026993 RefSeq:NP_009143.1
UniGene:Hs.591490 PDB:3H8H PDB:3IXS PDBsum:3H8H PDBsum:3IXS
ProteinModelPortal:Q99496 SMR:Q99496 DIP:DIP-40034N IntAct:Q99496
MINT:MINT-1420125 STRING:Q99496 PhosphoSite:Q99496 DMDM:62901044
PaxDb:Q99496 PRIDE:Q99496 DNASU:6045 Ensembl:ENST00000367510
Ensembl:ENST00000453650 GeneID:6045 KEGG:hsa:6045 UCSC:uc001grc.1
GeneCards:GC01P185014 HGNC:HGNC:10061 HPA:HPA026803 MIM:608985
neXtProt:NX_Q99496 PharmGKB:PA34426 InParanoid:Q99496
PhylomeDB:Q99496 EvolutionaryTrace:Q99496 GenomeRNAi:6045
NextBio:23553 ArrayExpress:Q99496 Bgee:Q99496 CleanEx:HS_RNF2
Genevestigator:Q99496 GermOnline:ENSG00000121481 Uniprot:Q99496
Length = 336
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 44/178 (24%), Positives = 78/178 (43%)
Query: 29 LVLHLQKLALELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQC-ESECPLCKSQC-TY 85
+V+ + L EL CP+CL++ + C H FC CI + + ECP C+ + +
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 86 ADLRPLAFLENIIA-IYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSF 144
LRP + +I+ IY D + + V + +H + S S+ +Q +
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYEAHQ--ERVLARINKHNNQQALS-HSIEEGLKIQ-AM 153
Query: 145 NNSACDGQKGKGFELTGMGENKRDGGQNPNSAQPSSHT-QAGGIRDCRPAQIDINQLD 201
N Q+GK ++ G D G + + + S+H+ Q G + R D + L+
Sbjct: 154 NRL----QRGKKQQIEN-GSGAEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGLE 206
>UNIPROTKB|Q5R9J5 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9601 "Pongo abelii" [GO:0000151 "ubiquitin ligase complex"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0031519 "PcG protein complex" evidence=ISS] [GO:0035102 "PRC1
complex" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005694 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0006351
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102 HOVERGEN:HBG079942
KO:K10695 CTD:6045 EMBL:CR859392 RefSeq:NP_001127433.1
UniGene:Pab.7792 ProteinModelPortal:Q5R9J5 SMR:Q5R9J5 PRIDE:Q5R9J5
GeneID:100174504 KEGG:pon:100174504 InParanoid:Q5R9J5
Uniprot:Q5R9J5
Length = 336
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 44/178 (24%), Positives = 78/178 (43%)
Query: 29 LVLHLQKLALELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQC-ESECPLCKSQC-TY 85
+V+ + L EL CP+CL++ + C H FC CI + + ECP C+ + +
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 86 ADLRPLAFLENIIA-IYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSF 144
LRP + +I+ IY D + + V + +H + S S+ +Q +
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYEAHQ--ERVLARINKHNNQQALS-HSIEEGLKIQ-AM 153
Query: 145 NNSACDGQKGKGFELTGMGENKRDGGQNPNSAQPSSHT-QAGGIRDCRPAQIDINQLD 201
N Q+GK ++ G D G + + + S+H+ Q G + R D + L+
Sbjct: 154 NRL----QRGKKQQIEN-GSGAEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGLE 206
>MGI|MGI:1101759 [details] [associations]
symbol:Rnf2 "ring finger protein 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0000151 "ubiquitin
ligase complex" evidence=ISO;IDA] [GO:0000278 "mitotic cell cycle"
evidence=IMP] [GO:0001702 "gastrulation with mouth forming second"
evidence=IMP] [GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=ISO] [GO:0009948 "anterior/posterior axis
specification" evidence=IMP] [GO:0016574 "histone ubiquitination"
evidence=IGI;IDA] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;IDA] [GO:0035102 "PRC1 complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISO] [GO:0071535 "RING-like
zinc finger domain binding" evidence=ISO] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1101759
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278
GO:GO:0035518 GO:GO:0031519 GO:GO:0035102 GO:GO:0016574 PDB:2CKL
PDBsum:2CKL GO:GO:0001739 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1
EMBL:Y12880 EMBL:Y12783 EMBL:AK145767 EMBL:AK012358 EMBL:AK013124
EMBL:AK030319 EMBL:AK090066 EMBL:CT010297 EMBL:BC020122
IPI:IPI00133880 RefSeq:NP_035407.1 UniGene:Mm.474038
ProteinModelPortal:Q9CQJ4 SMR:Q9CQJ4 IntAct:Q9CQJ4
MINT:MINT-1341250 STRING:Q9CQJ4 PhosphoSite:Q9CQJ4 PaxDb:Q9CQJ4
PRIDE:Q9CQJ4 Ensembl:ENSMUST00000076110 GeneID:19821 KEGG:mmu:19821
UCSC:uc007cyx.1 InParanoid:Q9CQJ4 EvolutionaryTrace:Q9CQJ4
NextBio:297285 Bgee:Q9CQJ4 CleanEx:MM_RNF2 Genevestigator:Q9CQJ4
GermOnline:ENSMUSG00000026484 Uniprot:Q9CQJ4
Length = 336
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 44/178 (24%), Positives = 78/178 (43%)
Query: 29 LVLHLQKLALELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQC-ESECPLCKSQC-TY 85
+V+ + L EL CP+CL++ + C H FC CI + + ECP C+ + +
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 86 ADLRPLAFLENIIA-IYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSF 144
LRP + +I+ IY D + + V + +H + S S+ +Q +
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYEAHQ--ERVLARINKHNNQQALS-HSIEEGLKIQ-AM 153
Query: 145 NNSACDGQKGKGFELTGMGENKRDGGQNPNSAQPSSHT-QAGGIRDCRPAQIDINQLD 201
N Q+GK ++ G D G + + + S+H+ Q G + R D + L+
Sbjct: 154 NRL----QRGKKQQIEN-GSGAEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGLE 206
>UNIPROTKB|E7EWN5 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0007420 GO:GO:0032355
GO:GO:0005759 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000794 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 IPI:IPI00930098
ProteinModelPortal:E7EWN5 SMR:E7EWN5 Ensembl:ENST00000470026
ArrayExpress:E7EWN5 Bgee:E7EWN5 Uniprot:E7EWN5
Length = 649
Score = 126 (49.4 bits), Expect = 0.00024, P = 0.00024
Identities = 34/120 (28%), Positives = 56/120 (46%)
Query: 33 LQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPR---SAQCESECPLCKSQCTYADLR 89
+QK+ L+CP+CL L P+ CDHIFC C+ + + S+CPLCK+ T L+
Sbjct: 18 MQKI---LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQ 74
Query: 90 PLA-FLENIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSFNNSA 148
F + + + K + A L+ S +E+NS + + + + N A
Sbjct: 75 ESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDEVSIIQSMGYRNRA 134
>DICTYBASE|DDB_G0271500 [details] [associations]
symbol:DG1106 "Kelch repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR006652 InterPro:IPR015915
Pfam:PF00643 Pfam:PF01344 PROSITE:PS50089 SMART:SM00184
SMART:SM00612 dictyBase:DDB_G0271500 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GenomeReviews:CM000151_GR EMBL:AAFI02000006
GO:GO:0005622 Gene3D:2.120.10.80 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:2.130.10.80 InterPro:IPR015916
InterPro:IPR017907 eggNOG:NOG299517 RefSeq:XP_645588.1
ProteinModelPortal:Q86AD8 EnsemblProtists:DDB0185081 GeneID:8618041
KEGG:ddi:DDB_G0271500 InParanoid:Q86AD8 OMA:HRNRISA Uniprot:Q86AD8
Length = 1207
Score = 129 (50.5 bits), Expect = 0.00025, P = 0.00025
Identities = 40/192 (20%), Positives = 80/192 (41%)
Query: 41 KCPLCLNLFSRPLLLPCDHIFCNSCIP-----RSAQCESECPLCKSQCTYADLRPLAFLE 95
+C +C LF+ P L C+H FC+ C+ RS Q C +C + + + L
Sbjct: 13 QCFICKKLFTHPKTLRCNHSFCSDCLELNSFSRSKQMLYHCRICGDKTSSHEAWNNEQLT 72
Query: 96 NIIAIYKGLDASPSSNLLQPVYSAFGRHQEDNSSSGQSLSANTLVQVSFNNSACDGQKGK 155
+K + S + + G + +N+++ +++ N NN+ + G
Sbjct: 73 RYANEFKNYQLNGSIGGIVVNVNGNGHYNNNNNNNNNNININKNNNGGINNNINNNNNGI 132
Query: 156 GFELTGMGENKRDGGQNPNSAQPSSHTQAGG--IRDCRPAQIDINQLDQLSPCSPPSFGD 213
+ G G +G N N + + G + +P +N L+ ++ S + G+
Sbjct: 133 ---INGNGSGNGNGNGNGNGSSGGNTAPIGSPNMNGMKPPPPLLNSLNGITNLSNLNLGN 189
Query: 214 IKGSDNESNDQG 225
I ++N S+ +G
Sbjct: 190 INNNNNPSSPRG 201
>ZFIN|ZDB-GENE-030131-4325 [details] [associations]
symbol:trim8b "tripartite motif-containing 8b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 ZFIN:ZDB-GENE-030131-4325 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL928692 CTD:81603 HOVERGEN:HBG056254
IPI:IPI00862400 RefSeq:NP_001038379.1 UniGene:Dr.73064
ProteinModelPortal:Q1MTE4 PRIDE:Q1MTE4 GeneID:559967
KEGG:dre:559967 InParanoid:Q1MTE4 NextBio:20883228
ArrayExpress:Q1MTE4 Bgee:Q1MTE4 Uniprot:Q1MTE4
Length = 564
Score = 125 (49.1 bits), Expect = 0.00026, P = 0.00026
Identities = 28/79 (35%), Positives = 40/79 (50%)
Query: 39 ELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCES---ECPLCKSQCTYAD-LRPLAFL 94
EL CP+CLN+FS P+ LPC H FC CI + ++ CP C + T L L
Sbjct: 12 ELICPICLNVFSEPVQLPCKHNFCRMCINEAWSKDAGMVRCPECNNAYTQKPALEKNHKL 71
Query: 95 ENIIAIYKGLDASPSSNLL 113
NI+ + L+ + +L
Sbjct: 72 SNIVEKFNALNVEKTPAVL 90
>UNIPROTKB|F1N658 [details] [associations]
symbol:RNF41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] [GO:0051896 "regulation of protein
kinase B signaling cascade" evidence=IEA] [GO:0045637 "regulation
of myeloid cell differentiation" evidence=IEA] [GO:0045619
"regulation of lymphocyte differentiation" evidence=IEA]
[GO:0043408 "regulation of MAPK cascade" evidence=IEA] [GO:0030336
"negative regulation of cell migration" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0005135
"interleukin-3 receptor binding" evidence=IEA] [GO:0005128
"erythropoietin receptor binding" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0031386 "protein
tag" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015036 Pfam:PF08941 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0008285 GO:GO:0006917 GO:GO:0046872
GO:GO:0008270 GO:GO:0030336 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0031386
SUPFAM:SSF49599 GO:GO:2000377 GO:GO:0051896 Gene3D:3.90.890.10
GO:GO:0043408 GeneTree:ENSGT00530000063647 OMA:CHERRWP
EMBL:DAAA02013531 EMBL:DAAA02013532 EMBL:DAAA02013533
IPI:IPI00717146 Ensembl:ENSBTAT00000038204 Uniprot:F1N658
Length = 317
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 39 ELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQCESECPLCKSQCTYADLRPLA-FLEN 96
+L CP+C + P+ P C+H FCN+CI + + CP+ +S T A LRP+ + N
Sbjct: 15 DLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHLRPVPRIMRN 74
Query: 97 IIA 99
+++
Sbjct: 75 MLS 77
>UNIPROTKB|E2QVC5 [details] [associations]
symbol:RNF41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000377 "regulation of reactive oxygen
species metabolic process" evidence=IEA] [GO:0051896 "regulation of
protein kinase B signaling cascade" evidence=IEA] [GO:0045637
"regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045619 "regulation of lymphocyte differentiation"
evidence=IEA] [GO:0043408 "regulation of MAPK cascade"
evidence=IEA] [GO:0030336 "negative regulation of cell migration"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=IEA] [GO:0005135 "interleukin-3 receptor binding"
evidence=IEA] [GO:0005128 "erythropoietin receptor binding"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0031386 "protein tag" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
InterPro:IPR015036 Pfam:PF08941 PROSITE:PS50089 PROSITE:PS51081
SMART:SM00184 Prosite:PS00518 GO:GO:0008285 GO:GO:0006917
GO:GO:0046872 GO:GO:0008270 GO:GO:0030336 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907
GO:GO:0031386 SUPFAM:SSF49599 GO:GO:2000377 GO:GO:0051896
Gene3D:3.90.890.10 GO:GO:0043408 GeneTree:ENSGT00530000063647
CTD:10193 KO:K11981 OMA:CHERRWP EMBL:AAEX03006921 EMBL:AAEX03006922
RefSeq:XP_848722.1 RefSeq:XP_856953.1 SMR:E2QVC5
Ensembl:ENSCAFT00000000183 GeneID:607044 KEGG:cfa:607044
NextBio:20892797 Uniprot:E2QVC5
Length = 317
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 39 ELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQCESECPLCKSQCTYADLRPLA-FLEN 96
+L CP+C + P+ P C+H FCN+CI + + CP+ +S T A LRP+ + N
Sbjct: 15 DLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHLRPVPRIMRN 74
Query: 97 IIA 99
+++
Sbjct: 75 MLS 77
>UNIPROTKB|Q9H4P4 [details] [associations]
symbol:RNF41 "E3 ubiquitin-protein ligase NRDP1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031386 "protein tag" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0005128 "erythropoietin
receptor binding" evidence=IEA] [GO:0005135 "interleukin-3 receptor
binding" evidence=IEA] [GO:0045619 "regulation of lymphocyte
differentiation" evidence=IEA] [GO:0045637 "regulation of myeloid
cell differentiation" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA;TAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0006917 "induction of
apoptosis" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IMP] [GO:0008285 "negative regulation
of cell proliferation" evidence=IDA] [GO:0030336 "negative
regulation of cell migration" evidence=IMP] [GO:0043408 "regulation
of MAPK cascade" evidence=IDA] [GO:0051896 "regulation of protein
kinase B signaling cascade" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] InterPro:IPR001841 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR015036
Pfam:PF08941 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0008285 GO:GO:0006917 GO:GO:0046872 GO:GO:0008270
EMBL:CH471054 GO:GO:0030336 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0031386
SUPFAM:SSF49599 GO:GO:2000377 GO:GO:0051896 Gene3D:3.90.890.10
GO:GO:0043408 CTD:10193 eggNOG:NOG254243 HOGENOM:HOG000006561
HOVERGEN:HBG053154 KO:K11981 OrthoDB:EOG44TP85 EMBL:AF077599
EMBL:AK314811 EMBL:AC073896 EMBL:BC024284 EMBL:BC032637
EMBL:AY007109 IPI:IPI00024801 IPI:IPI00375624 RefSeq:NP_001229755.1
RefSeq:NP_005776.1 RefSeq:NP_919339.1 RefSeq:NP_919340.1
UniGene:Hs.524502 PDB:2FZP PDB:2GWF PDBsum:2FZP PDBsum:2GWF
ProteinModelPortal:Q9H4P4 SMR:Q9H4P4 IntAct:Q9H4P4 STRING:Q9H4P4
PhosphoSite:Q9H4P4 DMDM:88909120 PaxDb:Q9H4P4 PRIDE:Q9H4P4
DNASU:10193 Ensembl:ENST00000345093 Ensembl:ENST00000394013
Ensembl:ENST00000552656 GeneID:10193 KEGG:hsa:10193 UCSC:uc001ske.2
GeneCards:GC12M056598 HGNC:HGNC:18401 HPA:HPA016812
neXtProt:NX_Q9H4P4 PharmGKB:PA134875033 InParanoid:Q9H4P4
OMA:CHERRWP PhylomeDB:Q9H4P4 EvolutionaryTrace:Q9H4P4
GenomeRNAi:10193 NextBio:38572 ArrayExpress:Q9H4P4 Bgee:Q9H4P4
CleanEx:HS_RNF41 Genevestigator:Q9H4P4 GermOnline:ENSG00000181852
Uniprot:Q9H4P4
Length = 317
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 39 ELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQCESECPLCKSQCTYADLRPLA-FLEN 96
+L CP+C + P+ P C+H FCN+CI + + CP+ +S T A LRP+ + N
Sbjct: 15 DLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHLRPVPRIMRN 74
Query: 97 IIA 99
+++
Sbjct: 75 MLS 77
>UNIPROTKB|I3LFT6 [details] [associations]
symbol:LOC100157936 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031386 "protein tag" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015036
Pfam:PF08941 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0031386 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00530000063647 KO:K11981
OMA:CHERRWP EMBL:CU694915 RefSeq:XP_001927720.2
RefSeq:XP_003481664.1 ProteinModelPortal:I3LFT6 SMR:I3LFT6
Ensembl:ENSSSCT00000031416 GeneID:100157936 KEGG:ssc:100157936
Uniprot:I3LFT6
Length = 317
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 39 ELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQCESECPLCKSQCTYADLRPLA-FLEN 96
+L CP+C + P+ P C+H FCN+CI + + CP+ +S T A LRP+ + N
Sbjct: 15 DLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHLRPVPRIMRN 74
Query: 97 IIA 99
+++
Sbjct: 75 MLS 77
>UNIPROTKB|Q5FWL3 [details] [associations]
symbol:rnf41 "E3 ubiquitin-protein ligase NRDP1"
species:8355 "Xenopus laevis" [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0006917 "induction of apoptosis"
evidence=ISS] InterPro:IPR001841 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015036 Pfam:PF08941 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0006917
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0031386
SUPFAM:SSF49599 Gene3D:3.90.890.10 CTD:10193 HOVERGEN:HBG053154
KO:K11981 EMBL:BC089294 EMBL:BC108758 RefSeq:NP_001089261.1
UniGene:Xl.71609 ProteinModelPortal:Q5FWL3 SMR:Q5FWL3 GeneID:734308
KEGG:xla:734308 Xenbase:XB-GENE-943151 Uniprot:Q5FWL3
Length = 317
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 39 ELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQCESECPLCKSQCTYADLRPLA-FLEN 96
+L CP+C + P+ P C+H FCN+CI + + CP+ +S T A LRP+ + N
Sbjct: 15 DLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHLRPVPRIMRN 74
Query: 97 IIA 99
+++
Sbjct: 75 MLS 77
>UNIPROTKB|Q5R7T5 [details] [associations]
symbol:RNF41 "E3 ubiquitin-protein ligase NRDP1"
species:9601 "Pongo abelii" [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0006917 "induction of apoptosis"
evidence=ISS] InterPro:IPR001841 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 InterPro:IPR015036
Pfam:PF08941 PROSITE:PS50089 PROSITE:PS51081 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0006915 GO:GO:0008285
GO:GO:0006917 GO:GO:0046872 GO:GO:0008270 GO:GO:0030336
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000209
InterPro:IPR017907 GO:GO:0031386 SUPFAM:SSF49599 GO:GO:2000377
GO:GO:0051896 Gene3D:3.90.890.10 GO:GO:0043408
GeneTree:ENSGT00530000063647 CTD:10193 HOVERGEN:HBG053154 KO:K11981
OMA:CHERRWP EMBL:CR860024 RefSeq:NP_001126274.1 UniGene:Pab.5407
HSSP:Q9H4P4 ProteinModelPortal:Q5R7T5 SMR:Q5R7T5 PRIDE:Q5R7T5
Ensembl:ENSPPYT00000005505 GeneID:100173246 KEGG:pon:100173246
InParanoid:Q5R7T5 Uniprot:Q5R7T5
Length = 317
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 39 ELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQCESECPLCKSQCTYADLRPLA-FLEN 96
+L CP+C + P+ P C+H FCN+CI + + CP+ +S T A LRP+ + N
Sbjct: 15 DLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHLRPVPRIMRN 74
Query: 97 IIA 99
+++
Sbjct: 75 MLS 77
>MGI|MGI:1914838 [details] [associations]
symbol:Rnf41 "ring finger protein 41" species:10090 "Mus
musculus" [GO:0000209 "protein polyubiquitination"
evidence=ISO;IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005128 "erythropoietin receptor binding"
evidence=IDA] [GO:0005135 "interleukin-3 receptor binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016881 "acid-amino acid ligase activity" evidence=IEA]
[GO:0030336 "negative regulation of cell migration" evidence=ISO]
[GO:0031386 "protein tag" evidence=IEA] [GO:0043408 "regulation of
MAPK cascade" evidence=ISO] [GO:0045619 "regulation of lymphocyte
differentiation" evidence=IDA] [GO:0045637 "regulation of myeloid
cell differentiation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051896 "regulation of protein kinase B signaling
cascade" evidence=ISO] [GO:2000377 "regulation of reactive oxygen
species metabolic process" evidence=ISO] InterPro:IPR001841
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
InterPro:IPR015036 Pfam:PF08941 PROSITE:PS50089 PROSITE:PS51081
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1914838 Prosite:PS00518
GO:GO:0006915 GO:GO:0008285 GO:GO:0006917 GO:GO:0046872
GO:GO:0008270 GO:GO:0030336 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0031386
SUPFAM:SSF49599 GO:GO:2000377 GO:GO:0051896 Gene3D:3.90.890.10
GO:GO:0005128 GO:GO:0043408 GO:GO:0005135 GO:GO:0045619
GO:GO:0045637 GeneTree:ENSGT00530000063647 CTD:10193
eggNOG:NOG254243 HOGENOM:HOG000006561 HOVERGEN:HBG053154 KO:K11981
OrthoDB:EOG44TP85 OMA:CHERRWP EMBL:AK015745 EMBL:AK020527
EMBL:AK028551 EMBL:AK030558 EMBL:AK031657 EMBL:AK032848
EMBL:AK034551 EMBL:AK044103 EMBL:AK077466 EMBL:BC019415
EMBL:BC049078 IPI:IPI00308182 IPI:IPI00720089 RefSeq:NP_001157709.1
RefSeq:NP_080535.2 UniGene:Mm.294120 PDB:2OGB PDBsum:2OGB
ProteinModelPortal:Q8BH75 SMR:Q8BH75 MINT:MINT-7148521
STRING:Q8BH75 PhosphoSite:Q8BH75 PRIDE:Q8BH75 DNASU:67588
Ensembl:ENSMUST00000096386 Ensembl:ENSMUST00000171342 GeneID:67588
KEGG:mmu:67588 UCSC:uc007hmr.2 UCSC:uc007hms.2 InParanoid:Q8BH75
EvolutionaryTrace:Q8BH75 NextBio:324987 Bgee:Q8BH75
CleanEx:MM_RNF41 Genevestigator:Q8BH75
GermOnline:ENSMUSG00000025373 Uniprot:Q8BH75
Length = 317
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 39 ELKCPLCLNLFSRPLLLP-CDHIFCNSCIPRSAQCESECPLCKSQCTYADLRPLA-FLEN 96
+L CP+C + P+ P C+H FCN+CI + + CP+ +S T A LRP+ + N
Sbjct: 15 DLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHLRPVPRIMRN 74
Query: 97 IIA 99
+++
Sbjct: 75 MLS 77
>MGI|MGI:2385051 [details] [associations]
symbol:Trim31 "tripartite motif-containing 31" species:10090
"Mus musculus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 MGI:MGI:2385051 Prosite:PS00518 GO:GO:0005739
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 EMBL:CH466559 HOGENOM:HOG000234133
CTD:11074 eggNOG:NOG310139 KO:K12011 OMA:EFQFLNP OrthoDB:EOG4K0QNJ
EMBL:AK033650 EMBL:BC026666 IPI:IPI00153211 RefSeq:NP_666189.1
UniGene:Mm.213417 HSSP:Q92021 ProteinModelPortal:Q8R0K2 SMR:Q8R0K2
STRING:Q8R0K2 PRIDE:Q8R0K2 Ensembl:ENSMUST00000078438 GeneID:224762
KEGG:mmu:224762 UCSC:uc008cll.1 GeneTree:ENSGT00700000104499
InParanoid:Q8R0K2 NextBio:377349 Bgee:Q8R0K2 Uniprot:Q8R0K2
Length = 507
Score = 124 (48.7 bits), Expect = 0.00028, P = 0.00028
Identities = 29/100 (29%), Positives = 46/100 (46%)
Query: 28 PLVLHLQKLALELKCPLCLNLFSRPLLLPCDHIFCNSCIPRSAQCES--ECPLCKSQCTY 85
PL LQ+ E+ CP+C+ + P+ + C H FC CI + + +CPLCK
Sbjct: 5 PLACQLQE---EVTCPICMEILQDPVTIDCGHNFCLQCISQVGKTSEKIQCPLCKLSVNK 61
Query: 86 ADLRPLAFLENIIAIYKGLDASPSSNLLQPVYSAFGRHQE 125
RP L ++ + +D P+ + S RH+E
Sbjct: 62 NTFRPNKLLASLAEKIQSMD--PADIQAEKEDSRCQRHKE 99
WARNING: HSPs involving 78 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 691 691 0.00081 121 3 11 22 0.42 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 328
No. of states in DFA: 625 (66 KB)
Total size of DFA: 399 KB (2193 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 63.56u 0.09s 63.65t Elapsed: 00:00:03
Total cpu time: 63.59u 0.09s 63.68t Elapsed: 00:00:03
Start: Mon May 20 18:26:54 2013 End: Mon May 20 18:26:57 2013
WARNINGS ISSUED: 2