Query 038259
Match_columns 501
No_of_seqs 241 out of 2130
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 15:37:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038259.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038259hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 4.3E-88 1.5E-92 715.7 49.7 482 2-493 19-515 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 6.8E-85 2.3E-89 689.8 47.3 474 5-492 14-495 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 9.1E-79 3.1E-83 648.5 45.3 474 4-492 20-497 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 1.1E-74 3.9E-79 610.6 42.0 447 5-491 11-472 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 1.2E-73 4.2E-78 605.3 42.1 453 2-490 6-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 7E-69 2.4E-73 573.1 43.3 449 3-490 29-523 (523)
7 2ipi_A Aclacinomycin oxidoredu 100.0 3.7E-68 1.3E-72 567.7 47.0 452 3-491 27-520 (521)
8 2y3s_A TAML; oxidoreductase; H 100.0 3.2E-68 1.1E-72 568.3 44.5 452 4-491 32-528 (530)
9 1zr6_A Glucooligosaccharide ox 100.0 2.5E-67 8.5E-72 559.4 40.6 444 7-491 19-479 (503)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 6.9E-66 2.4E-70 543.7 38.0 436 3-490 11-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 2.7E-40 9.3E-45 354.5 34.6 190 27-222 59-259 (534)
12 2exr_A Cytokinin dehydrogenase 100.0 4.4E-35 1.5E-39 312.7 35.0 200 27-232 52-262 (524)
13 3pm9_A Putative oxidoreductase 100.0 3.2E-35 1.1E-39 309.5 28.6 206 26-234 41-253 (476)
14 4bby_A Alkyldihydroxyacetoneph 100.0 2E-34 7E-39 315.4 22.2 202 29-232 198-408 (658)
15 4feh_A Oxidoreductase DPRE1; a 100.0 2.3E-32 7.8E-37 287.9 34.8 199 28-234 35-238 (481)
16 1wvf_A 4-cresol dehydrogenase 100.0 1.4E-32 4.9E-37 293.7 30.3 199 33-236 53-268 (520)
17 2vfr_A Xylitol oxidase, aldito 100.0 2E-31 6.9E-36 277.9 28.4 176 28-214 12-189 (422)
18 2uuu_A Alkyldihydroxyacetoneph 100.0 3.1E-32 1E-36 293.2 19.2 200 32-233 133-339 (584)
19 2i0k_A Oxidoreductase; MIX alp 100.0 1.4E-30 4.7E-35 280.0 17.9 201 3-214 7-227 (561)
20 1e8g_A Vanillyl-alcohol oxidas 100.0 1E-28 3.6E-33 265.7 24.6 202 33-236 67-300 (560)
21 3js8_A Cholesterol oxidase; ch 100.0 1.8E-29 6.3E-34 265.9 17.4 190 12-212 11-221 (540)
22 1f0x_A DLDH, D-lactate dehydro 100.0 8.2E-29 2.8E-33 264.8 14.2 198 29-233 39-297 (571)
23 3tx1_A UDP-N-acetylenolpyruvoy 99.9 1.1E-26 3.8E-31 231.7 12.9 165 33-210 51-217 (322)
24 3i99_A UDP-N-acetylenolpyruvoy 99.9 1.4E-25 4.9E-30 225.9 13.2 166 32-210 26-199 (357)
25 1hsk_A UDP-N-acetylenolpyruvoy 99.9 8.6E-26 2.9E-30 226.7 10.5 163 33-208 45-209 (326)
26 1uxy_A MURB, uridine diphospho 99.9 2.9E-24 1E-28 215.8 17.1 165 33-210 11-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 1.2E-22 4.2E-27 197.1 8.3 153 33-209 19-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 2.7E-19 9.3E-24 168.7 10.5 118 94-218 1-124 (219)
29 1ffv_C CUTM, flavoprotein of c 98.3 4E-07 1.4E-11 89.2 5.6 158 36-208 4-177 (287)
30 1n62_C Carbon monoxide dehydro 97.6 6.3E-05 2.2E-09 73.5 5.8 154 36-207 4-176 (288)
31 2w3s_A Xanthine dehydrogenase; 97.3 0.00015 5E-09 75.4 4.1 151 39-207 179-345 (462)
32 1t3q_C Quinoline 2-oxidoreduct 94.4 0.061 2.1E-06 52.2 6.7 153 35-206 3-174 (288)
33 3nvz_B Xanthine dehydrogenase/ 94.2 0.038 1.3E-06 54.1 4.8 156 36-206 9-189 (305)
34 3hrd_C Nicotinate dehydrogenas 93.5 0.072 2.5E-06 51.9 5.3 76 36-116 2-82 (296)
35 1rm6_B 4-hydroxybenzoyl-COA re 89.5 0.3 1E-05 48.0 4.7 76 36-117 5-84 (324)
36 4bby_A Alkyldihydroxyacetoneph 88.1 0.98 3.3E-05 48.9 8.0 29 456-484 625-654 (658)
37 3unc_A Xanthine dehydrogenase/ 76.1 1.9 6.5E-05 50.4 4.6 79 36-120 232-314 (1332)
38 2uuu_A Alkyldihydroxyacetoneph 65.2 8.3 0.00029 40.9 6.2 29 456-484 551-580 (584)
39 2i0k_A Oxidoreductase; MIX alp 49.7 7.3 0.00025 41.2 2.5 22 464-485 533-554 (561)
40 1f0x_A DLDH, D-lactate dehydro 49.6 9.1 0.00031 40.5 3.2 32 463-495 536-568 (571)
41 1e8g_A Vanillyl-alcohol oxidas 48.5 24 0.00084 37.0 6.4 26 464-489 523-548 (560)
42 1rzw_A Protein AF2095(GR4); be 46.5 28 0.00097 28.7 5.1 42 28-71 42-84 (123)
43 1wn2_A Peptidyl-tRNA hydrolase 41.9 43 0.0015 27.5 5.5 42 28-71 49-91 (121)
44 1xty_A PTH, peptidyl-tRNA hydr 40.4 46 0.0016 27.2 5.5 42 28-71 48-90 (120)
45 3js8_A Cholesterol oxidase; ch 38.6 15 0.0005 38.6 2.7 23 463-485 511-533 (540)
46 1rlk_A Hypothetical protein TA 37.9 45 0.0015 27.1 5.0 42 28-71 45-87 (117)
47 2zv3_A PTH, peptidyl-tRNA hydr 37.3 44 0.0015 27.1 4.8 41 28-70 43-84 (115)
48 1q7s_A BIT1, protein CGI-147; 31.7 75 0.0026 25.7 5.4 41 28-70 45-86 (117)
49 3p04_A Uncharacterized BCR; SE 30.5 43 0.0015 25.7 3.5 34 38-93 7-40 (87)
50 3zyv_A AOH1; oxidoreductase, m 29.7 25 0.00087 41.1 3.0 77 39-120 242-321 (1335)
51 2g2c_A Putative molybdenum cof 24.4 1.2E+02 0.0042 25.9 5.9 41 38-78 47-87 (167)
52 1mkz_A Molybdenum cofactor bio 21.7 1.5E+02 0.0052 25.5 5.9 40 38-77 46-86 (172)
53 2ozl_B PDHE1-B, pyruvate dehyd 20.7 83 0.0028 30.6 4.4 31 38-68 154-184 (341)
54 2kxh_B Peptide of FAR upstream 20.2 57 0.0019 19.6 1.8 20 461-480 9-28 (31)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=4.3e-88 Score=715.75 Aligned_cols=482 Identities=55% Similarity=0.994 Sum_probs=418.8
Q ss_pred CCCCCceecCCCCChhhHhhhccccccCCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccCC
Q 038259 2 SSISKVTYTKINSSYSSVLNFTIQNFRFSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVSQV 81 (501)
Q Consensus 2 ~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~ 81 (501)
.++++.|++|+|+.|++++.++++|.||+....++|.+||+|+|++||+++|++|+++++||.+|||||++.+.+.....
T Consensus 19 ~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~~ 98 (518)
T 3vte_A 19 VANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIRTRSGGHDAEGMSYISQV 98 (518)
T ss_dssp ---CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCTTCTTTCCSS
T ss_pred CCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCCC
Confidence 46789999999999999998889999999988999999999999999999999999999999999999999887743222
Q ss_pred CEEEEEccCCCCeEEcCCCCEEEEcCCCcHHHHHHHHHHhCCCceeccCCCCcccccccccCCCCCCcccccccccccEe
Q 038259 82 PFVVIDLLNLSEINVDAVAKTAWVQAGATLGQLYYRIAEKSKNLGFPAGLCPTVGAGGHISGGGYGVMLRKFGLAADNIV 161 (501)
Q Consensus 82 ~~vvIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~ 161 (501)
++++|||++|++|++|+++.+|+||||+++.+|+++|.++|++|.+++|.|++|||||+++|||+|+++++||+.+|+|+
T Consensus 99 ~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~gGg~G~~s~~~G~~~D~V~ 178 (518)
T 3vte_A 99 PFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSGGGYGALMRNYGLAADNII 178 (518)
T ss_dssp SEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEE
T ss_pred CeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCCCCCccccCCCCchhheEE
Confidence 49999999999999999999999999999999999999998789999999999999999999999999999999999999
Q ss_pred EEEEEecCCcEEeccCCCcchHHHhhccccCCceEEEEEEEEEEEecCCeeEEEEEEecch-hhHHHHHHHHHHHHHhhc
Q 038259 162 DAHLIDANGRFLDRESMGEDLFWAIRGGGIGASFGVIVAWKVRLVPVPSTVTRCLVTRNLE-QNATKIVHKWQYVANKLH 240 (501)
Q Consensus 162 ~~~vV~~~G~v~~~~~~~~dl~~a~rg~~~~g~~Givt~~t~k~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p 240 (501)
+++||++||++++.+.+|+|||||+|||+ +|+|||||+++||++|.|+.+..|.+.+.++ +++.+++.+||++.+++|
T Consensus 179 ~~evV~adG~iv~~~~~~~DLf~a~rGgg-~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p 257 (518)
T 3vte_A 179 DAHLVNVDGKVLDRKSMGEDLFWAIRGGG-GENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGLVKLFNKWQNIAYKYD 257 (518)
T ss_dssp EEEEECTTCCEECHHHHCHHHHHHHTTSC-GGGTCEEEEEEEECEECCSCEEEEEEEECCCHHHHHHHHHHHHHHGGGSC
T ss_pred EEEEEccCCeEEEeeccccchhhheeccc-CCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHHHHHHHHHHHHHHHcCC
Confidence 99999999999975446899999999984 4999999999999999999888888887654 567889999999999999
Q ss_pred cCceEEEEEec---------CCceeEEEEEEEEeCCccChhhhHhhhcCcCCCCcccceecchHHHHHhhcCCCCC-Cc-
Q 038259 241 EDLFIEVTLTR---------MNSTMVATFSLVFQGGVDRLLPLMQESFPELGLTKEDCTEMSWIESVHNLAGFDKG-QS- 309 (501)
Q Consensus 241 ~~l~~~~~~~~---------~~~~~~i~~~~~~~G~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~- 309 (501)
+++++.+.+.. ++..+.+.+.++|+|+.+++.+.|.+.|++++.....+.+++|++.+.++++++.+ .+
T Consensus 258 ~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 337 (518)
T 3vte_A 258 KDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSWIDTTIFYSGVVNFNTAN 337 (518)
T ss_dssp TTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECHHHHHHHTSSSCCC----
T ss_pred HhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecchhhhhhhhhcCCccCCcc
Confidence 99999887653 11235678889999999999998888788887766788999999988888766543 33
Q ss_pred --hhhhhcccccCCcccccCCccccccccccccCCCCCHHHHHHHHHHHhhcCCceEEEEEEecCCcCCCCCCCCCCCcc
Q 038259 310 --LDLLLDRNARSNGVVVNGTTKDFFKGKSDYVKQPIPQNAFEGIYDKFYEEEGQRAFMVLVPYGGKMSEISESETPFPH 387 (501)
Q Consensus 310 --~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~Ggav~~~~~~~taf~~ 387 (501)
++.++++... .+.|||.||.|+.+++++++++.+++.+.+.+...+.+.+.++||++++++.++|||+|
T Consensus 338 ~~~~~l~~~~~~---------~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~v~~~~TAf~h 408 (518)
T 3vte_A 338 FKKEILLDRSAG---------KKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEISESAIPFPH 408 (518)
T ss_dssp -CGGGGGCTTCS---------CCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGTSCTTSSSCCC
T ss_pred chhhhhccCCcC---------cccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccCCCCCCCcccc
Confidence 4555555432 34678899999988899999999999887644335789999999999999999999999
Q ss_pred cCCCeEEEEEEeeeCCcchhhHHHHHHHHHHhhccccccCCCCccccCCCCCCCC-CCCCCCcchhhhchhhhhhhcccH
Q 038259 388 RAGNLYKIFYGVAWGEDRTSRRHIDWIRRLYGYMTPYVSKNPREAYINYRDLDIG-TNNQGYTSIKQASVWGSKYFKNNF 466 (501)
Q Consensus 388 R~~~~~~i~~~~~w~~~~~~~~~~~wi~~~~~~l~~~~~~~~~g~Y~Ny~d~~~~-~~~~~~~~~~~~~~~~~~yyg~n~ 466 (501)
|+++.|.+++.+.|.+++.++++.+|++++++.+.|+....+.++|+||+|.+++ .+..++++++....|++.|||+||
T Consensus 409 R~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~~~~~~~w~~~Yyg~N~ 488 (518)
T 3vte_A 409 RAGIMYELWYTASWEKQEDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQARIWGEKYFGKNF 488 (518)
T ss_dssp CTTCCEEEEEEEEECCTTTHHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCCHHHHHHHHHHHSSTHH
T ss_pred cCcceEEEEEEEecCCcchhHHHHHHHHHHHHHhccccCCCCccccccCCCccccccccccccchhhhhhHHHHHhHhHH
Confidence 9955899999999988778888999999999999999655567999999998876 322234555556689999999999
Q ss_pred HHHHHHHhhcCCCCCCcCCCCCCCccc
Q 038259 467 KRLVRVKSMVDPHNFFRNEQSIPPLTS 493 (501)
Q Consensus 467 ~RL~~IK~kyDP~n~F~~~~sI~~~~~ 493 (501)
+||++||+||||+|+|+++|||+|..+
T Consensus 489 ~RL~~vK~~yDP~n~F~~~QsI~p~~~ 515 (518)
T 3vte_A 489 NRLVKVKTKVDPNNFFRNEQSIPPLPP 515 (518)
T ss_dssp HHHHHHHHHHCTTCCSCCTTCCCCCCT
T ss_pred HHHHHHHhhcCchhcccCCCCCCCCCC
Confidence 999999999999999999999999866
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=6.8e-85 Score=689.82 Aligned_cols=474 Identities=46% Similarity=0.831 Sum_probs=410.9
Q ss_pred CCceecCCCCChhhHhhhccccccCCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccCCCEE
Q 038259 5 SKVTYTKINSSYSSVLNFTIQNFRFSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVSQVPFV 84 (501)
Q Consensus 5 ~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~~~v 84 (501)
++.|++|+|++|++++.++.+|.||+....++|.+||+|+|++||+++|++|+++++||+|||||||+.|.+...+.+++
T Consensus 14 ~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGgGh~~~g~~~~~~~ggv 93 (495)
T 3fw9_A 14 HTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGGHSYEGLSYTSDTPFI 93 (495)
T ss_dssp EEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESSCCCTTCTTSCCSSCEE
T ss_pred CCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCccccCCCCeE
Confidence 67899999999999988889999999999999999999999999999999999999999999999999888765444589
Q ss_pred EEEccCCCCeEEcCCCCEEEEcCCCcHHHHHHHHHHhCCCceeccCCCCcccccccccCCCCCCcccccccccccEeEEE
Q 038259 85 VIDLLNLSEINVDAVAKTAWVQAGATLGQLYYRIAEKSKNLGFPAGLCPTVGAGGHISGGGYGVMLRKFGLAADNIVDAH 164 (501)
Q Consensus 85 vIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~ 164 (501)
+|||++|++|++|+++.+|+||||+++.+|+++|.+++++|.+++|.|+++||||+++|||+|+++++||+.+|+|++++
T Consensus 94 vIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G~~~~~~G~~~D~v~~~~ 173 (495)
T 3fw9_A 94 LIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGMMSRKYGLAADNVVDAI 173 (495)
T ss_dssp EEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEE
T ss_pred EEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCcccccCCCchhheEEEEE
Confidence 99999999999999999999999999999999999997778999999999999999999999999999999999999999
Q ss_pred EEecCCcEEeccCCCcchHHHhhccccCCceEEEEEEEEEEEecCCeeEEEEEEecch-hhHHHHHHHHHHHHHhhccCc
Q 038259 165 LIDANGRFLDRESMGEDLFWAIRGGGIGASFGVIVAWKVRLVPVPSTVTRCLVTRNLE-QNATKIVHKWQYVANKLHEDL 243 (501)
Q Consensus 165 vV~~~G~v~~~~~~~~dl~~a~rg~~~~g~~Givt~~t~k~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~l 243 (501)
||++||++++++.+++||||++|||+ +|+|||||+++||++|.|+.+..+.+.++++ +++.+++.+|+++.+++|+++
T Consensus 174 vV~adG~i~~~~~~~~DLf~a~rGg~-~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~l 252 (495)
T 3fw9_A 174 LIDANGAILDRQAMGEDVFWAIRGGG-GGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLHKWQFVAEELEEDF 252 (495)
T ss_dssp EECTTCCEECHHHHCHHHHHHHTTSC-TTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHHHHHHHHHHHHSCTTE
T ss_pred EEcCCCCEEEcCCCChhhhhhhhccc-CCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHHHHHHHHHHhcCChhH
Confidence 99999999985556899999999944 4999999999999999999888888887654 567889999999999999999
Q ss_pred eEEEEEecCCceeEEEEEEEEeCCccChhhhHhhhcCcCCCCcccceecchHHHHHhhcCCCCCCchhhhhcccccCCcc
Q 038259 244 FIEVTLTRMNSTMVATFSLVFQGGVDRLLPLMQESFPELGLTKEDCTEMSWIESVHNLAGFDKGQSLDLLLDRNARSNGV 323 (501)
Q Consensus 244 ~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (501)
++.+..........+.+.++|.|+.+++.+.|.+.|+++++....+.+++|++...++++++. ++.++++...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~---- 325 (495)
T 3fw9_A 253 TLSVLGGADEKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAYLAGLET---VSQLNNRFLK---- 325 (495)
T ss_dssp EEEEEEEEETTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHTTCSC---GGGGGCTTSC----
T ss_pred eEEEEEcCCCCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHHHhcccc---hhhhcCCCCC----
Confidence 988775433345567888999999999988888877888777778899999998877765432 3334444321
Q ss_pred cccCCccccccccccccCCCCCHHHHHHHHHHHhhcCCceEEEEEEecCCcCCCCCCCCCCCcccCCCeEEEEEEeeeCC
Q 038259 324 VVNGTTKDFFKGKSDYVKQPIPQNAFEGIYDKFYEEEGQRAFMVLVPYGGKMSEISESETPFPHRAGNLYKIFYGVAWGE 403 (501)
Q Consensus 324 ~~~g~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~Ggav~~~~~~~taf~~R~~~~~~i~~~~~w~~ 403 (501)
..+.+||.||.|+.+++++++++.+++.+.+.+. ..+.+.++||++++++.++|||+||+++.|.+++.+.|.+
T Consensus 326 ----~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~--~~~~~~~~GGa~~~v~~~~TAf~hR~~~~~~~~~~~~w~~ 399 (495)
T 3fw9_A 326 ----FDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPN--GFIALNGFGGQMSKISSDFTPFPHRSGTRLMVEYIVAWNQ 399 (495)
T ss_dssp ----SCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTT--EEEEEEECCGGGGTSCTTTSSCCCCTTCCEEEEEEEEECG
T ss_pred ----ccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCC--cEEEecccCCccccCCCCCCCccccCccceEEEEEEecCC
Confidence 0135788999999989999999999998877653 6789999999999999999999999855899999999976
Q ss_pred c--chhhHHHHHHHHHHhhccccccCCCCccccCCCCCCCCCCCC-----CCcchhhhchhhhhhhcccHHHHHHHHhhc
Q 038259 404 D--RTSRRHIDWIRRLYGYMTPYVSKNPREAYINYRDLDIGTNNQ-----GYTSIKQASVWGSKYFKNNFKRLVRVKSMV 476 (501)
Q Consensus 404 ~--~~~~~~~~wi~~~~~~l~~~~~~~~~g~Y~Ny~d~~~~~~~~-----~~~~~~~~~~~~~~yyg~n~~RL~~IK~ky 476 (501)
+ +.++++.+|++++++.+.|+....++++|+||+|.+++.++. ++++++....|++.|||+||+||++||+||
T Consensus 400 ~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yyg~n~~RL~~vK~~y 479 (495)
T 3fw9_A 400 SEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFLSNYERLIRAKTLI 479 (495)
T ss_dssp GGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHHGGGHHHHHHHHHHH
T ss_pred CCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHHhHhHHHHHHHHHHhh
Confidence 3 667789999999999999997545578999999988752111 123344455899999999999999999999
Q ss_pred CCCCCCcCCCCCCCcc
Q 038259 477 DPHNFFRNEQSIPPLT 492 (501)
Q Consensus 477 DP~n~F~~~~sI~~~~ 492 (501)
||+|+|+++|||+|.+
T Consensus 480 DP~n~F~~~qsI~p~~ 495 (495)
T 3fw9_A 480 DPNNVFNHPQSIPPMA 495 (495)
T ss_dssp CTTCCSCCTTCCCCCC
T ss_pred CcHhhCCCCCCCCCCC
Confidence 9999999999999864
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=9.1e-79 Score=648.49 Aligned_cols=474 Identities=48% Similarity=0.894 Sum_probs=399.4
Q ss_pred CCCceecCCCCChhhHhhhccccccCCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCccc--CC
Q 038259 4 ISKVTYTKINSSYSSVLNFTIQNFRFSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVS--QV 81 (501)
Q Consensus 4 ~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~--~~ 81 (501)
+.+.|++|+|+.|.+++.++.+|.||+....++|.+||+|+|++||+++|++|+++++||+||||||++.|.+.+. .+
T Consensus 20 ~~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~~r~gGh~~~g~s~~~~~~~ 99 (500)
T 3tsh_A 20 PPRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIRVRSGGHDYEGLSYRSLQPE 99 (500)
T ss_dssp CGGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCTTCTTTCCSSSC
T ss_pred CCCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEEEEcCCcCCCCCcCCCCCcC
Confidence 4567899999999999999999999999999999999999999999999999999999999999999998876532 12
Q ss_pred CEEEEEccCCCCeEEcCCCCEEEEcCCCcHHHHHHHHHHhCCCceeccCCCCcccccccccCCCCCCcccccccccccEe
Q 038259 82 PFVVIDLLNLSEINVDAVAKTAWVQAGATLGQLYYRIAEKSKNLGFPAGLCPTVGAGGHISGGGYGVMLRKFGLAADNIV 161 (501)
Q Consensus 82 ~~vvIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~ 161 (501)
++++|||++||+|++|++.++++||||+++++|+++|.++|+.+.+++|.|++|||||+++|||+|+++++||+++|+|+
T Consensus 100 ~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~ 179 (500)
T 3tsh_A 100 TFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAGGGFGMLLRKYGIAAENVI 179 (500)
T ss_dssp CEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHHTCCCCTTHHHHCCGGGGEE
T ss_pred CeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccccccCCccccccCChhhhee
Confidence 58999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred EEEEEecCCcEEeccCCCcchHHHhhccccCCceEEEEEEEEEEEecCCeeEEEEEEecchhhHHHHHHHHHHHHHhhcc
Q 038259 162 DAHLIDANGRFLDRESMGEDLFWAIRGGGIGASFGVIVAWKVRLVPVPSTVTRCLVTRNLEQNATKIVHKWQYVANKLHE 241 (501)
Q Consensus 162 ~~~vV~~~G~v~~~~~~~~dl~~a~rg~~~~g~~Givt~~t~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 241 (501)
++|||++||+|++.+.+++||||++|||+ +|+|||||++|||++|.|+.+..+.+.+...+.+.+++.+|+.+.+++|+
T Consensus 180 ~~~vV~a~G~i~~~~~~~~dl~~a~~gg~-gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (500)
T 3tsh_A 180 DVKLVDANGKLHDKKSMGDDHFWAVRGGG-GESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGAVDIINKWQVVAPQLPA 258 (500)
T ss_dssp EEEEECTTSCEECHHHHCHHHHHHHTTSC-SSTTCEEEEEEEECEECCSCEEEEEEEEETTTTHHHHHHHHHHHGGGSCT
T ss_pred eEEEECCCceEEECCCCChHHHHHHHhhc-ccceEEEEEEEEEEEeCCCeEEEEEEecCcHHHHHHHHHHHHHhhhccCh
Confidence 99999999999986667899999999877 68999999999999999998877777776666678899999999999999
Q ss_pred CceEEEEEecCCceeEEEEEEEEeCCccChhhhHhhhcCcCCCCcccceecchHHHHHhhcCCCCCCchhhhhcccccCC
Q 038259 242 DLFIEVTLTRMNSTMVATFSLVFQGGVDRLLPLMQESFPELGLTKEDCTEMSWIESVHNLAGFDKGQSLDLLLDRNARSN 321 (501)
Q Consensus 242 ~l~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (501)
++.+.+.... +...+..+|.|+.+++.+.+.+.+++++.....+..++|.+...+............+.++...
T Consensus 259 ~l~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 332 (500)
T 3tsh_A 259 DLMIRIIAQG----PKATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWIQSIPFVHLGHRDALEDDLLNRQNS-- 332 (500)
T ss_dssp TEEEEEEESS----SEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHHHCCSSCHHHHHHCCCCC--
T ss_pred hhEEEEEecC----CCcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhhccchhhhhcccccccccccccccc--
Confidence 9887766532 3456778899998888888777777777766777788888866554322222222233333222
Q ss_pred cccccCCccccccccccccCCCCCHHHHHHHHHHHhhcCCceEEEEEEecCCcCCCCCCCCCCCcccCCCeEEEEEEeee
Q 038259 322 GVVVNGTTKDFFKGKSDYVKQPIPQNAFEGIYDKFYEEEGQRAFMVLVPYGGKMSEISESETPFPHRAGNLYKIFYGVAW 401 (501)
Q Consensus 322 ~~~~~g~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~Ggav~~~~~~~taf~~R~~~~~~i~~~~~w 401 (501)
...+.+.++.++.++++++.++.+++.+...+. ...+.++++||+++++++++|||+||++..+++++...|
T Consensus 333 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Gga~~~~~~~ata~~~R~~~l~~i~~~~~w 404 (500)
T 3tsh_A 333 -------FKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPG-AGIMIFDPYGATISATPESATPFPHRKGVLFNIQYVNYW 404 (500)
T ss_dssp -------CCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTT-CCEEEEEECCHHHHHSCTTSSSCCCCTTCCEEEEEEEEE
T ss_pred -------ccchhhhhhhhhcccCcHHHHHHHHHHhhcCCC-ceEEEEcccCccccCCCCccCcCcccCCcEEEEEEEEec
Confidence 234455567777777888888888877665544 345678899999999999999999999777899999999
Q ss_pred CCcchhhHHHHHHHHHHhhccccccCCCCccccCCCCCCCCCCCCC--CcchhhhchhhhhhhcccHHHHHHHHhhcCCC
Q 038259 402 GEDRTSRRHIDWIRRLYGYMTPYVSKNPREAYINYRDLDIGTNNQG--YTSIKQASVWGSKYFKNNFKRLVRVKSMVDPH 479 (501)
Q Consensus 402 ~~~~~~~~~~~wi~~~~~~l~~~~~~~~~g~Y~Ny~d~~~~~~~~~--~~~~~~~~~~~~~yyg~n~~RL~~IK~kyDP~ 479 (501)
.+++++++..+|++++++.+.|+....+.++|+||+|.+++.++.. ...+....+|++.|||+||+||++||+||||+
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~g~Ny~RL~~IK~kyDP~ 484 (500)
T 3tsh_A 405 FAPGAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYFKGNFERLAITKGKVDPT 484 (500)
T ss_dssp CSTTCCHHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHHGGGHHHHHHHHHHHCTT
T ss_pred CCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHHhhhHHHHHHHHHHHHhCcc
Confidence 9988889999999999999999976666789999999887632110 11233446899999999999999999999999
Q ss_pred CCCcCCCCCCCcc
Q 038259 480 NFFRNEQSIPPLT 492 (501)
Q Consensus 480 n~F~~~~sI~~~~ 492 (501)
|+|+++|||||..
T Consensus 485 nvF~~~qsI~Pl~ 497 (500)
T 3tsh_A 485 DYFRNEQSIPPLI 497 (500)
T ss_dssp CCSCCTTSCCCCC
T ss_pred cccCCCCCCCCCC
Confidence 9999999999964
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=1.1e-74 Score=610.55 Aligned_cols=447 Identities=24% Similarity=0.427 Sum_probs=368.5
Q ss_pred CCceecCCCCChhhHhhhccccccCCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccCCCEE
Q 038259 5 SKVTYTKINSSYSSVLNFTIQNFRFSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVSQVPFV 84 (501)
Q Consensus 5 ~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~~~v 84 (501)
..+|++|+|+.|++++. +|+......|.+||+|+|++||+++|++|+++++|+.+||||||+.+.+....++++
T Consensus 11 ~~~v~~p~~~~y~~~~~------~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~~v 84 (473)
T 3rja_A 11 GVPIDIPGTADYERDVE------PFNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGGHSYASFGFGGENGHL 84 (473)
T ss_dssp TCCBCCTTSHHHHHHTC------CSBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCTTCGGGTSSSSCE
T ss_pred CCcEECCCCCchHHHHH------HhhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCCCCCCCCcccCCCCeE
Confidence 45799999999998754 355555679999999999999999999999999999999999999865443223589
Q ss_pred EEEccCCCCeE-EcCCCCEEEEcCCCcHHHHHHHHHHhCCCceeccCCCCcccccccccCCCCCCcccccccccccEeEE
Q 038259 85 VIDLLNLSEIN-VDAVAKTAWVQAGATLGQLYYRIAEKSKNLGFPAGLCPTVGAGGHISGGGYGVMLRKFGLAADNIVDA 163 (501)
Q Consensus 85 vIdl~~l~~i~-~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~ 163 (501)
+|||++|++|. +|+++.+|+||||+++.+|+++|.++| ++.++.|.|+++||||+++|||+|+.+++||+.+|+|+++
T Consensus 85 vIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G-~~~~p~G~~~~vgvgG~~~ggg~G~~~~~~G~~~D~v~~~ 163 (473)
T 3rja_A 85 MVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKY-GRAISHGTCPGVGISGHFAHGGFGFSSHMHGLAVDSVVGV 163 (473)
T ss_dssp EEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHH-SEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEE
T ss_pred EEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcC-CEEeccCCCCCcEeeeeccCCCCCcccccccchHhheeeE
Confidence 99999999996 999999999999999999999999997 4788899999999999999999999999999999999999
Q ss_pred EEEecCCcEEe-ccCCCcchHHHhhccccCCceEEEEEEEEEEEecCCeeEEEEEEecch--hhHHHHHHHHHHHHH-hh
Q 038259 164 HLIDANGRFLD-RESMGEDLFWAIRGGGIGASFGVIVAWKVRLVPVPSTVTRCLVTRNLE--QNATKIVHKWQYVAN-KL 239 (501)
Q Consensus 164 ~vV~~~G~v~~-~~~~~~dl~~a~rg~~~~g~~Givt~~t~k~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~ 239 (501)
+||++||++++ +..+|+||||++||++ |+|||||+++||++|.|+.+..+.+.+++. +++.+++++|+++.. ++
T Consensus 164 ~vV~a~G~v~~~~~~~~~dLf~a~rG~~--g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (473)
T 3rja_A 164 TVVLADGRIVEASATENADLFWGIKGAG--SNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSALKGIEAVEDYARWVA 241 (473)
T ss_dssp EEECTTSCEEEEETTBSHHHHHHHHHHG--GGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHHHHHHHHHHHHHHTC
T ss_pred EEEecCCeEEEeCCCCCcchhhcccCCC--CceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHHHHHHHHHHHhhhCC
Confidence 99999999997 5667899999999998 999999999999999998888888877764 347889999999988 89
Q ss_pred ccCceEEEEEecCCceeEEEEEEEEeCCccChhhhHhhhcCcCC-CCcccce-ecchHHHHHhhcCCCCCCchhhhhccc
Q 038259 240 HEDLFIEVTLTRMNSTMVATFSLVFQGGVDRLLPLMQESFPELG-LTKEDCT-EMSWIESVHNLAGFDKGQSLDLLLDRN 317 (501)
Q Consensus 240 p~~l~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~l~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (501)
|+++++.+.+.. .. .+.+.++|.|+.+++.++|++++...+ +....+. +++|.+...+++... .+ +..
T Consensus 242 p~~l~~~~~~~~-~~--~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~ 311 (473)
T 3rja_A 242 PREVNFRIGDYG-AG--NPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWIESVLSYSNFD---HV----DFI 311 (473)
T ss_dssp CTTEEEEEEESS-SS--CCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECHHHHHHHTSSSS---CC----CCS
T ss_pred ChhHEEEEEEcC-CC--cEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCHHHHHHhhhcCC---Cc----ccc
Confidence 999998888752 22 267789999999999988887543333 3456777 899999776554211 11 100
Q ss_pred ccCCcccccCCccccccccccccCCCCCHHHHHHHHHHHhhc-CC---ceEEEEEEecCC---cCCCCCCCCCCCcccCC
Q 038259 318 ARSNGVVVNGTTKDFFKGKSDYVKQPIPQNAFEGIYDKFYEE-EG---QRAFMVLVPYGG---KMSEISESETPFPHRAG 390 (501)
Q Consensus 318 ~~~~~~~~~g~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~-~~---~~~~i~~~~~Gg---av~~~~~~~taf~~R~~ 390 (501)
.. .....|+.++.+.. ++++++++.+++.+.+. +. ..+.+.++++|| ++++++.++|||+||+
T Consensus 312 ~~--------~~~~~~~~ks~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~v~~~~TAf~hR~- 381 (473)
T 3rja_A 312 TP--------QPVENFYAKSLTLK-SIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTKVTNAETAYPHRD- 381 (473)
T ss_dssp SC--------CCCBEEEEEEEEES-CCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGGSCTTTSSCCCTT-
T ss_pred cC--------CCCCcceEeccccC-CCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhcCCCCCCCccccCC-
Confidence 00 00234567787765 69999999999988653 22 245688999998 6788899999999999
Q ss_pred CeEEEEEEeeeCC-cchhhHHHHHHHHHHhhccccccCCCCccccCCCCCCCCCCCCCCcchhhhchhhhhhhcccHHHH
Q 038259 391 NLYKIFYGVAWGE-DRTSRRHIDWIRRLYGYMTPYVSKNPREAYINYRDLDIGTNNQGYTSIKQASVWGSKYFKNNFKRL 469 (501)
Q Consensus 391 ~~~~i~~~~~w~~-~~~~~~~~~wi~~~~~~l~~~~~~~~~g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~yyg~n~~RL 469 (501)
..|.+++.+.|.+ ++.+++..+|++++++.+.+.......++|+||+|.+++ ..+|++.|||+||+||
T Consensus 382 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~-----------~~~~~~~yyg~n~~RL 450 (473)
T 3rja_A 382 KLWLIQFYDRYDNNQTYPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMD-----------RDYATKVYYGENLARL 450 (473)
T ss_dssp CSEEEEEEEEECTTSCCCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSC-----------HHHHHHHHHGGGHHHH
T ss_pred ccEEEEEEEEeCCCCccchHHHHHHHHHHHHHHhhCCCCCCceEecCCCcccc-----------chhHHHHHHHHHHHHH
Confidence 6899999999964 555566778888887777555332345899999998864 2379999999999999
Q ss_pred HHHHhhcCCCCCCcCCCCCCCc
Q 038259 470 VRVKSMVDPHNFFRNEQSIPPL 491 (501)
Q Consensus 470 ~~IK~kyDP~n~F~~~~sI~~~ 491 (501)
++||+||||+|+|+++|||+|.
T Consensus 451 ~~vK~kyDP~n~F~~~qsI~p~ 472 (473)
T 3rja_A 451 QKLKAKFDPTDRFYYPQAVRPV 472 (473)
T ss_dssp HHHHHHHCTTCTTCCTTSCCCC
T ss_pred HHHhhccCchhhCCCCcCCCCC
Confidence 9999999999999999999985
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=1.2e-73 Score=605.28 Aligned_cols=453 Identities=23% Similarity=0.385 Sum_probs=358.7
Q ss_pred CCCCCceecCCCCChhhHhhhccccccCCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccCC
Q 038259 2 SSISKVTYTKINSSYSSVLNFTIQNFRFSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVSQV 81 (501)
Q Consensus 2 ~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~ 81 (501)
+|+.+.|++|+|+.|++++. .||.|| ..+|.+||+|+|++||+++|++|+++++||++|||||++.+.+...+
T Consensus 6 ~s~~~~~~~p~~~~y~~~~~--~~n~~~----~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~- 78 (501)
T 3pop_A 6 ASVPPFTVGREDPRYIELSH--SDNHRF----VVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPR- 78 (501)
T ss_dssp ---CCEEEETTSTTHHHHTC--CSCTTS----CCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSC-
T ss_pred ccCCCceECCCCcchHHHHH--HHhhcc----CCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCC-
Confidence 58899999999999999864 456665 56999999999999999999999999999999999999998776543
Q ss_pred CEEEEEccCCCCeEEcCCCCEEEEcCCCcHHHHHHHHHH-hCCCceeccCCCCcccccccccCCCCCCcccccccccccE
Q 038259 82 PFVVIDLLNLSEINVDAVAKTAWVQAGATLGQLYYRIAE-KSKNLGFPAGLCPTVGAGGHISGGGYGVMLRKFGLAADNI 160 (501)
Q Consensus 82 ~~vvIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~l~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v 160 (501)
++++|||++||+|++|++..+|+||||+++.+|+++|.+ +| +.++.|.|++|||||+++|||+|+++++||+++|+|
T Consensus 79 ~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v 156 (501)
T 3pop_A 79 RDLVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWN--AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHL 156 (501)
T ss_dssp CSEEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHS--BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGE
T ss_pred CEEEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcC--eEeCCCCCCCceEeeccccCCCcccccccccHHHhE
Confidence 489999999999999999999999999999999999975 55 678899999999999999999999999999999999
Q ss_pred eEEEEEe--cCCc--EEe----ccCCCcchHHHhhccccCCceEEEEEEEEEE----------EecC-CeeEEEEEEecc
Q 038259 161 VDAHLID--ANGR--FLD----RESMGEDLFWAIRGGGIGASFGVIVAWKVRL----------VPVP-STVTRCLVTRNL 221 (501)
Q Consensus 161 ~~~~vV~--~~G~--v~~----~~~~~~dl~~a~rg~~~~g~~Givt~~t~k~----------~p~~-~~~~~~~~~~~~ 221 (501)
+++|||+ +||+ ++. ++.+|+|||||+||+| +|+|||||+++||+ +|.+ ..+..+.+.|+.
T Consensus 157 ~~~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G-~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~ 235 (501)
T 3pop_A 157 HAVEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGG-GGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPW 235 (501)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSC-TTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEG
T ss_pred EEEEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccC-CCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEch
Confidence 9999999 8999 443 2356899999999985 49999999999998 6654 456667777765
Q ss_pred hh----hHHHHHHHHHHHHH--hhccC----ceEEEEEecCCceeEEEEEEEEeCCccChhhhHhhhcCc------CCCC
Q 038259 222 EQ----NATKIVHKWQYVAN--KLHED----LFIEVTLTRMNSTMVATFSLVFQGGVDRLLPLMQESFPE------LGLT 285 (501)
Q Consensus 222 ~~----~~~~~~~~~~~~~~--~~p~~----l~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~l~~~~~~------~~~~ 285 (501)
.+ .+.++++.|+++.. ..|++ +...+.+.... ...+.+..+|.|+.+++.+++++++.. +.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~p~ 314 (501)
T 3pop_A 236 AMIDETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNHVS-SGVLQLMVQQDADVDPEGEILARFVASLTEGTGVVGI 314 (501)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEECGG-GCEEEEEEEEETTTCTTCHHHHHHHHHHHTTSSCCCE
T ss_pred hhcCHHHHHHHHHHHHHHHhhccCCCccccceEEEEEecCCC-CCeEEEEEEEeCChHHHHHHHHHHHHhhhhccCCCcc
Confidence 32 34677888888775 34554 33333333211 113456677899888877777665432 2333
Q ss_pred cccceecchHHHHHhhcCCCCCCchhhhhcccccCCcccccCCccccccccccccCCCCCHHHHHHHHHHHhhc-CCceE
Q 038259 286 KEDCTEMSWIESVHNLAGFDKGQSLDLLLDRNARSNGVVVNGTTKDFFKGKSDYVKQPIPQNAFEGIYDKFYEE-EGQRA 364 (501)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~-~~~~~ 364 (501)
.. +.+++|.+...+.. .+.+. .. ...+++.++.|+.++++++.++.+++.+... +...+
T Consensus 315 ~~-~~~~~~~~~~~~~~-~~~~~---------~~---------~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~ 374 (501)
T 3pop_A 315 PR-GGVMSWLTGTRYMS-QADCG---------DV---------MGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQAS 374 (501)
T ss_dssp EE-EEEEEHHHHHHHTC-BCSCG---------GG---------TTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTE
T ss_pred ce-eEEeCHHHHHhhhc-CCCCC---------cc---------cccccceecccccCCCCHHHHHHHHHHHHhcCCCCce
Confidence 33 78889988654431 11000 00 0124567888988789999999999988763 33457
Q ss_pred EEEEEecCCcCCCCCCCCCCCcccCCCeEEEEEEeeeCCcchhhHHHHHHHHHHhhcccccc------CCCCccccCCCC
Q 038259 365 FMVLVPYGGKMSEISESETPFPHRAGNLYKIFYGVAWGEDRTSRRHIDWIRRLYGYMTPYVS------KNPREAYINYRD 438 (501)
Q Consensus 365 ~i~~~~~Ggav~~~~~~~taf~~R~~~~~~i~~~~~w~~~~~~~~~~~wi~~~~~~l~~~~~------~~~~g~Y~Ny~d 438 (501)
.+.+.++||+++++++++|||+||+ ..|++++...|.+++.++++.+|++++++.+.++.+ ....++|+||+|
T Consensus 375 ~~~~~~~GGav~~v~~~~TAf~hR~-~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d 453 (501)
T 3pop_A 375 YVMFNSYGGEINRRGPSDAAVPQRD-SVVKSSWFSAWQDAELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPD 453 (501)
T ss_dssp EEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCGGGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCC
T ss_pred EEEEEecCcccccCCCCCCCccCcC-ccEEEEEEEEeCCcchHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCC
Confidence 8899999999999999999999999 689999999998887888899999999999976542 224689999999
Q ss_pred CCCCCCCCCCcchhhhchhhhhhhcccHHHHHHHHhhcCCCCCCcCCCCCCC
Q 038259 439 LDIGTNNQGYTSIKQASVWGSKYFKNNFKRLVRVKSMVDPHNFFRNEQSIPP 490 (501)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~yyg~n~~RL~~IK~kyDP~n~F~~~~sI~~ 490 (501)
.+++.++. +++ ...|++.|||+||+||++||+||||+|+|+++|||+|
T Consensus 454 ~dl~~~~~-~~~---~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 454 ADLLDPAR-NRS---GEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp GGGGCTTT-CCS---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred cccccccc-ccc---cchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 88763211 111 2359999999999999999999999999999999987
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=7e-69 Score=573.10 Aligned_cols=449 Identities=26% Similarity=0.461 Sum_probs=348.4
Q ss_pred CCCCceecCCCCChhhHhhhccccccCCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccCCC
Q 038259 3 SISKVTYTKINSSYSSVLNFTIQNFRFSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVSQVP 82 (501)
Q Consensus 3 ~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~~ 82 (501)
+..+.|++|+|+.|++++ ...||.||. ..|.+||+|+|++||+++|++|+++++||.||||||++.+.+...+ +
T Consensus 29 ~~~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~-~ 102 (523)
T 2wdx_A 29 PAGPVKVTPDDPRYLNLK-LRGANSRFN----GEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGHCFEDFVDNPD-V 102 (523)
T ss_dssp CCCCEEECTTSTTHHHHH-TCSSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCSSSSSSSTT-C
T ss_pred cCCCeEECCCCcchHHHH-hhhhhhccc----CCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCccCCC-C
Confidence 345789999999999987 246788884 4899999999999999999999999999999999999998776532 4
Q ss_pred EEEEEccCCCCeEEcCCCCEEEEcCCCcHHHHHHHHHH-hCCCceeccCCCCcccccccccCCCCCCcccccccccccEe
Q 038259 83 FVVIDLLNLSEINVDAVAKTAWVQAGATLGQLYYRIAE-KSKNLGFPAGLCPTVGAGGHISGGGYGVMLRKFGLAADNIV 161 (501)
Q Consensus 83 ~vvIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~l~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~ 161 (501)
+++|||++||+|++|++..+|+||||+++.+|+++|.+ +| +.++.|.|++|||||+++|||+|+++++||+++|+|+
T Consensus 103 gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~ 180 (523)
T 2wdx_A 103 KVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWN--VTIPGGVCGGVGVGGHICGGGYGPLSRQFGSVVDYLY 180 (523)
T ss_dssp CEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHS--CCCCCCCCTTCBHHHHHHHTCCCTTHHHHCCGGGGEE
T ss_pred eEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcC--eEEccCCCCCCeeCccccCCCCCcccccccChhheEE
Confidence 89999999999999999999999999999999999985 76 6788899999999999999999999999999999999
Q ss_pred EEEEEecC--CcEEe---ccC-CCcc--hHHHhhccccCCceEEEEEEEEEE-----------EecCC-eeEEEEEEecc
Q 038259 162 DAHLIDAN--GRFLD---RES-MGED--LFWAIRGGGIGASFGVIVAWKVRL-----------VPVPS-TVTRCLVTRNL 221 (501)
Q Consensus 162 ~~~vV~~~--G~v~~---~~~-~~~d--l~~a~rg~~~~g~~Givt~~t~k~-----------~p~~~-~~~~~~~~~~~ 221 (501)
++|||++| |+++. +.. +++| ||||+||++ +|+|||||+++||+ +|.|+ .+..+.+.|+.
T Consensus 181 ~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg-~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 259 (523)
T 2wdx_A 181 AVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGG-GGNFGVVTKYWMRVPEDVGRNPERLLPKPPATLLTSTVTFDW 259 (523)
T ss_dssp EEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSC-SSSSSEEEEEEECCSSCCCSCGGGSSCCCCSEEEEEEEECCG
T ss_pred EEEEEEecCCccEEEEecccccCCCChHHHHHhhccC-CCCcEEEEEEEEEeecccCCCcccccCCCcccEEEEEEEecc
Confidence 99999955 99753 322 4555 999999865 58999999999999 99876 46667777765
Q ss_pred h----hhHHHHHHHHHHHHHh--hccC----ceEEEEEec-CCc--eeEEEEEEEEeCCccChhhhHhhhcCc----CC-
Q 038259 222 E----QNATKIVHKWQYVANK--LHED----LFIEVTLTR-MNS--TMVATFSLVFQGGVDRLLPLMQESFPE----LG- 283 (501)
Q Consensus 222 ~----~~~~~~~~~~~~~~~~--~p~~----l~~~~~~~~-~~~--~~~i~~~~~~~G~~~~~~~~l~~~~~~----~~- 283 (501)
. +.+.++++.|+++... .|++ +...+.+.. ..+ .+.+.+..+|.|+.++..+++.+++.. ++
T Consensus 260 ~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~l~~~~~~l~~~~~~ 339 (523)
T 2wdx_A 260 AGMTEAAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGNEVPGMGESGFMMPIQVDATRPDARRLLDAHIEAVIDGVPP 339 (523)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECCCTTCTTCSEEEEEEEETTSTTHHHHHHHHHHHHHTTCTT
T ss_pred cccCHHHHHHHHHHHHHHHhhcCCCCccccceEEEEEeccCCCCCcceeEEEEEEEeCCHHHHHHHHHHHHHHHHhhcCC
Confidence 3 2346788888888764 5655 333333332 111 234566778899887777766653321 23
Q ss_pred CCcccceecchHHHHHhhcCCCCCCchhhhhcccccCCcccccCCccccccccccccCCCCCHHHHHHHHHHHhhcC-Cc
Q 038259 284 LTKEDCTEMSWIESVHNLAGFDKGQSLDLLLDRNARSNGVVVNGTTKDFFKGKSDYVKQPIPQNAFEGIYDKFYEEE-GQ 362 (501)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~-~~ 362 (501)
+....+..++|.+....+ .. ...+++.++.++.+.++.+.++.+++.+.... ..
T Consensus 340 ~~~~~~~~~~~~~~~~~~-------------~~------------~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (523)
T 2wdx_A 340 AEVPEPIEQRWLASTPGR-------------GG------------RGPASKTKAGYLRKRLTDRQIQAVYENMTHMDGID 394 (523)
T ss_dssp CBCCCCEEEETTSSCCCC-------------CS------------SCCEEEEEEEEESSCCCHHHHHHHHHHHTCCTTCS
T ss_pred CccccceeccHHHHHHhh-------------cC------------CCCceeeecccccCCCCHHHHHHHHHHHHhcCCCC
Confidence 223344455664411000 00 01134456777765688888999999886532 24
Q ss_pred eEEEEEEecCCcCCCCCCCCCCCcccCCCeEEEEEEeeeCCcchhhHHHHHHHHHHhhcc------ccccCCCCccccCC
Q 038259 363 RAFMVLVPYGGKMSEISESETPFPHRAGNLYKIFYGVAWGEDRTSRRHIDWIRRLYGYMT------PYVSKNPREAYINY 436 (501)
Q Consensus 363 ~~~i~~~~~Ggav~~~~~~~taf~~R~~~~~~i~~~~~w~~~~~~~~~~~wi~~~~~~l~------~~~~~~~~g~Y~Ny 436 (501)
.+.+.++++||++++++.++|||+||+ ..|++++.+.|.++++++.+.+|++++++.+. |+.+....++|+||
T Consensus 395 ~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny 473 (523)
T 2wdx_A 395 YGAVWLIGYGGKVNTVDPAATALPQRD-AILKVNYITGWANPGNEAKHLTWVRKLYADVYAETGGVPVPNDVSDGAYINY 473 (523)
T ss_dssp EEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESSGGGHHHHHHHHHHHHHHHTGGGTTSCCSCSSBCCCCTTS
T ss_pred ceEEEEEecCCccccCCCccccccccC-ceEEEEEEEEcCCCccHHHHHHHHHHHHHHHHhhhcCCCccCCCCCcceecC
Confidence 567889999999999999999999999 68999999999988888889999999999887 33111135799999
Q ss_pred CCCCCCCCCCCCcchhhhchhhhhhhcccHHHHHHHHhhcCCCCCCcCCCCCCC
Q 038259 437 RDLDIGTNNQGYTSIKQASVWGSKYFKNNFKRLVRVKSMVDPHNFFRNEQSIPP 490 (501)
Q Consensus 437 ~d~~~~~~~~~~~~~~~~~~~~~~yyg~n~~RL~~IK~kyDP~n~F~~~~sI~~ 490 (501)
+|.+++.++ .+++. ..|++.|||+||+||++||+||||+|+|+++|+|+|
T Consensus 474 ~d~~~~~~~-~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 474 PDSDLADPG-LNTSG---VPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp CCGGGGCTT-TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred Ccccccccc-cccch---hHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 999875211 11121 149999999999999999999999999999999986
No 7
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=3.7e-68 Score=567.72 Aligned_cols=452 Identities=26% Similarity=0.475 Sum_probs=349.8
Q ss_pred CCCCceecCCCCChhhHhhhccccccCCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccCCC
Q 038259 3 SISKVTYTKINSSYSSVLNFTIQNFRFSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVSQVP 82 (501)
Q Consensus 3 ~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~~ 82 (501)
.....|++|+|+.|++++ ...||.||. ..|.+||+|+|++||+++|++|+++++||.||||||++.+.+.... +
T Consensus 27 ~~~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGh~~~g~~~~~~-~ 100 (521)
T 2ipi_A 27 RTALVKVDRVDRRYQDLV-TRGFNGRFR----GRPDVVYVVHTADQVVDAVNQAMAAGQRIAVRSGGHCFEGFVDDPA-V 100 (521)
T ss_dssp --CCCEEESSSTTHHHHH-TCCSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCTTCGGGCTT-C
T ss_pred CCCCeEECCCCcchHHHH-hcccccccc----CCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCCcccCC-C
Confidence 346789999999999987 235677774 4899999999999999999999999999999999999988665332 4
Q ss_pred EEEEEccCCCCeEEcCCCCEEEEcCCCcHHHHHHHHH-HhCCCceeccCCCCcccccccccCCCCCCcccccccccccEe
Q 038259 83 FVVIDLLNLSEINVDAVAKTAWVQAGATLGQLYYRIA-EKSKNLGFPAGLCPTVGAGGHISGGGYGVMLRKFGLAADNIV 161 (501)
Q Consensus 83 ~vvIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~-~~g~~l~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~ 161 (501)
+++|||++||+|++|++..+|+||||+++.+|+++|. ++| +.+++|.|++|||||+++|||+|+++++||+++|+|+
T Consensus 101 gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~ 178 (521)
T 2ipi_A 101 RAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG--VTIPAGVCPQVGVGGHVLGGGYGPLSRRDGVVADHLY 178 (521)
T ss_dssp CEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS--BCCCCCSCTTCBHHHHTTTTCCCTTHHHHCCGGGGEE
T ss_pred eEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC--ceeCCCCCCCcccCCcccCCCCCccccccccHhhcEE
Confidence 8999999999999999999999999999999999997 675 6778899999999999999999999999999999999
Q ss_pred EEEEEecC--CcEEe---ccC-CCc--chHHHhhccccCCceEEEEEEEEEE-----------EecCC-eeEEEEEEecc
Q 038259 162 DAHLIDAN--GRFLD---RES-MGE--DLFWAIRGGGIGASFGVIVAWKVRL-----------VPVPS-TVTRCLVTRNL 221 (501)
Q Consensus 162 ~~~vV~~~--G~v~~---~~~-~~~--dl~~a~rg~~~~g~~Givt~~t~k~-----------~p~~~-~~~~~~~~~~~ 221 (501)
++|||++| |+++. +.. +++ |||||+|||+ +|+|||||+++||+ +|.|+ .+..+.+.|+.
T Consensus 179 ~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg-~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 257 (521)
T 2ipi_A 179 AVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGG-GGNFGIVTRYWFRTPGATGTDPSQLLPKAPTSTLRHIVTWDW 257 (521)
T ss_dssp EEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSC-SSSSCEEEEEEECCSSCCSSCGGGSSCBCCSCEEEEEEEEES
T ss_pred EEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCC-CCceEEEEEEEEEeecccCCCcccccCCCCceEEEEEEEecc
Confidence 99999977 99742 222 445 5999999975 49999999999999 99876 35556666654
Q ss_pred h----hhHHHHHHHHHHHHHh--hccC----ceEEEEEecCCceeEEEEEEEEeCCccChhhhHhhhcC---c-CC-CCc
Q 038259 222 E----QNATKIVHKWQYVANK--LHED----LFIEVTLTRMNSTMVATFSLVFQGGVDRLLPLMQESFP---E-LG-LTK 286 (501)
Q Consensus 222 ~----~~~~~~~~~~~~~~~~--~p~~----l~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~l~~~~~---~-~~-~~~ 286 (501)
. +.+.+++++|+++... .|++ +...+.+.... ...+.+...|.|+.++..+++++++. + ++ +..
T Consensus 258 ~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~l~~~~~~l~~~~g~~~~ 336 (521)
T 2ipi_A 258 SALTEEAFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLNSRA-AGQILLDIQIDGGLDGAEALLNDFVAAVNEGTGVEPA 336 (521)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEECTT-SCEEEEEEEEETTSTTHHHHHHHHHHHHTTTCSSCCE
T ss_pred cccCHHHHHHHHHHHHHHHHhccCCCccccceEEEEEeccCC-CCceEEEEEeccCHHHHHHHHHHHHHHHHhhcCCCcc
Confidence 2 2346788888887754 4554 44444443311 11344566788988777666655322 1 22 333
Q ss_pred ccceecchHHHHHhhcCCCCCCchhhhhcccccCCcccccCCccccccccccccCCCCCHHHHHHHHHHHhhcCCceEEE
Q 038259 287 EDCTEMSWIESVHNLAGFDKGQSLDLLLDRNARSNGVVVNGTTKDFFKGKSDYVKQPIPQNAFEGIYDKFYEEEGQRAFM 366 (501)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 366 (501)
..+..++|.+....... ... + ...++.++.++.+.++.+.++.+++.+...+...+.+
T Consensus 337 ~~~~~~~~~~~~~~~~~-------------~~~-------~--~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 394 (521)
T 2ipi_A 337 VQRSTEPWLRATLANKF-------------DTG-------G--FDRTKSKGAYLRKPWTAAQAATLYRHLSADSQVWGEV 394 (521)
T ss_dssp EEEEEECHHHHHTCCCC-------------CCT-------T--CCEEEEEEEEESSCCCHHHHHHHHHHHHSCCSSEEEE
T ss_pred ceeeecCHHHHHHhhcC-------------CCC-------C--CccceeeccccccCCCHHHHHHHHHHHHhCCCCceEE
Confidence 45566788774322111 000 0 0124456677666688899999999887655456788
Q ss_pred EEEecCCcCCCCCCCCCCCcccCCCeEEEEEEeeeCCcchhhHHHHHHHHHHhhcccccc------CCCCccccCCCCCC
Q 038259 367 VLVPYGGKMSEISESETPFPHRAGNLYKIFYGVAWGEDRTSRRHIDWIRRLYGYMTPYVS------KNPREAYINYRDLD 440 (501)
Q Consensus 367 ~~~~~Ggav~~~~~~~taf~~R~~~~~~i~~~~~w~~~~~~~~~~~wi~~~~~~l~~~~~------~~~~g~Y~Ny~d~~ 440 (501)
.++++||++++++.++|||+||+ +.+++++.+.|.++++++...+|++++++.+.+... ....++|+||+|.+
T Consensus 395 ~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~g~Y~Ny~d~~ 473 (521)
T 2ipi_A 395 SLYSYGGKVNSVPETATATAQRD-SIIKVWMSATWMDPAHDDANLAWIREIYREIFATTGGVPVPDDRTEGTFINYPDVD 473 (521)
T ss_dssp EEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCGGGHHHHHHHHHHHHHHHTTTTTSSCCSSSSBCCCCTTSCCGG
T ss_pred EEEecCCcccCCCCccccccccc-hhhhcceeEecCCCCchHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCCCcc
Confidence 99999999999999999999999 689999999999888888899999999998873221 11357999999988
Q ss_pred CCCCCCCCcchhhhchhhhhhhcccHHHHHHHHhhcCCCCCCcCCCCCCCc
Q 038259 441 IGTNNQGYTSIKQASVWGSKYFKNNFKRLVRVKSMVDPHNFFRNEQSIPPL 491 (501)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~yyg~n~~RL~~IK~kyDP~n~F~~~~sI~~~ 491 (501)
++.++ .+++ ...|++.|||+||+||++||+||||+|+|+++|+|+|+
T Consensus 474 ~~~~~-~~~~---~~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 474 LVDER-WNTS---GVPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp GGCTT-TSCC---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred ccccc-cccc---hhhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 75211 0111 12499999999999999999999999999999999985
No 8
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=3.2e-68 Score=568.35 Aligned_cols=452 Identities=26% Similarity=0.459 Sum_probs=347.8
Q ss_pred CCCceecCCCCChhhHhhhccccccCCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccCCCE
Q 038259 4 ISKVTYTKINSSYSSVLNFTIQNFRFSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVSQVPF 83 (501)
Q Consensus 4 ~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~~~ 83 (501)
....|++|+|+.|++++. .||.|| ...|.+||+|+|++||+++|++|+++++||.||||||++.+.+.... ++
T Consensus 32 ~~~~v~~p~~~~Y~~~~~--~~n~~~----~~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~-~g 104 (530)
T 2y3s_A 32 KHIDSVAPGDIRYEDLRR--GENLRF----VGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANSD-VR 104 (530)
T ss_dssp --CCEECTTSTTHHHHTC--CSCTTC----CCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCTT-CC
T ss_pred CCceEECCCCccHHHHHh--Hhhhhc----cCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccCC-Ce
Confidence 345789999999999874 467777 45899999999999999999999999999999999999998665432 48
Q ss_pred EEEEccCCCCeEEcCCCCEEEEcCCCcHHHHHHHHHH-hCCCceeccCCCCcccccccccCCCCCCcccccccccccEeE
Q 038259 84 VVIDLLNLSEINVDAVAKTAWVQAGATLGQLYYRIAE-KSKNLGFPAGLCPTVGAGGHISGGGYGVMLRKFGLAADNIVD 162 (501)
Q Consensus 84 vvIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~l~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~ 162 (501)
++|||++|++|++|++..+|+||||+++.+|+++|.+ +| +.++.|.|++|||||+++|||+|+++++||+++|+|++
T Consensus 105 vvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~ 182 (530)
T 2y3s_A 105 VVMDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWG--VTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHA 182 (530)
T ss_dssp EEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHS--CCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEE
T ss_pred EEEEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcC--eEEeCCCCCCCCcCCCcCCCCCCcccccccchhhheee
Confidence 9999999999999999999999999999999999985 76 67888999999999999999999999999999999999
Q ss_pred EEEEe--cCCcEEe---ccC-CCcc--hHHHhhccccCCceEEEEEEEEEE------------EecCC-eeEEEEEEecc
Q 038259 163 AHLID--ANGRFLD---RES-MGED--LFWAIRGGGIGASFGVIVAWKVRL------------VPVPS-TVTRCLVTRNL 221 (501)
Q Consensus 163 ~~vV~--~~G~v~~---~~~-~~~d--l~~a~rg~~~~g~~Givt~~t~k~------------~p~~~-~~~~~~~~~~~ 221 (501)
+|||+ ++|+++. +.. +|+| ||||+||++ +|+|||||+++||+ +|.|+ .+..+.+.|+.
T Consensus 183 ~evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g-~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 261 (530)
T 2y3s_A 183 VEVVVVDASGDARTVIATREPSDPNHDLWWAHTGGG-GGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPW 261 (530)
T ss_dssp EEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSC-TTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEES
T ss_pred EEEEEecCCCcEEEEeccccccCCChHHHHHHhcCC-CCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEecc
Confidence 99999 5599742 332 4554 999999975 58999999999999 88875 45566666654
Q ss_pred h----hhHHHHHHHHHHHHHh--hccC----ceEEEEEecCCceeEEEEEEEEeCCccChhhhHhhhcC---c-CC-CCc
Q 038259 222 E----QNATKIVHKWQYVANK--LHED----LFIEVTLTRMNSTMVATFSLVFQGGVDRLLPLMQESFP---E-LG-LTK 286 (501)
Q Consensus 222 ~----~~~~~~~~~~~~~~~~--~p~~----l~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~l~~~~~---~-~~-~~~ 286 (501)
. +.+.++++.|+++... .|++ +...+.+... ....+.+...|.|+.++..+++++++. + ++ +..
T Consensus 262 ~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~l~p~~~~l~~~~g~~~~ 340 (530)
T 2y3s_A 262 EGLDEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTRS-QSGALAMTTQLDATGPDAEKRLETYLAAVSEGVGVQPH 340 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECG-GGSEEEEEEEEECCSTTHHHHHHHHHHHHHTTCSSCCE
T ss_pred cccCHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEEeccC-CCCcEEEEEEEeCCHHHHHHHHHHHHHHHHhhcCCCcc
Confidence 2 2346788888887754 4554 3333333321 111344566788988777766665322 1 23 333
Q ss_pred ccceecchHHHHHhhcCCCCCCchhhhhcccccCCcccccCCccccccccccccCCCCCHHHHHHHHHHHhhcC--CceE
Q 038259 287 EDCTEMSWIESVHNLAGFDKGQSLDLLLDRNARSNGVVVNGTTKDFFKGKSDYVKQPIPQNAFEGIYDKFYEEE--GQRA 364 (501)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~--~~~~ 364 (501)
..+..++|.+....... . .. +.....++.++.++.+.++.+.++.+++.+...+ ...+
T Consensus 341 ~~~~~~~~~~~~~~~~~-----------~--~~-------~~~~~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 400 (530)
T 2y3s_A 341 SDTRRLPWLHSTRWPGI-----------A--GD-------GDMTGRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAG 400 (530)
T ss_dssp EEEEEEEHHHHTTCHHH-----------H--CC-------CCCCSEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTC
T ss_pred ceeeeccHHHHHHhhcC-----------C--CC-------CcccccceeeccccccCCCHHHHHHHHHHHHhcCCCCCce
Confidence 45667788774322110 0 00 0001234556777766788899999999887642 2346
Q ss_pred EEEEEecCCcCCCCCCCCCCCcccCCCeEEEEEEeeeCCcchhhHHHHHHHHHHhhcc------ccccCCCCccccCCCC
Q 038259 365 FMVLVPYGGKMSEISESETPFPHRAGNLYKIFYGVAWGEDRTSRRHIDWIRRLYGYMT------PYVSKNPREAYINYRD 438 (501)
Q Consensus 365 ~i~~~~~Ggav~~~~~~~taf~~R~~~~~~i~~~~~w~~~~~~~~~~~wi~~~~~~l~------~~~~~~~~g~Y~Ny~d 438 (501)
.+.++++||++++++.++|||+||+ ..|++++.+.|.+++.++...+|++++++.+. |+.+....|+|+||+|
T Consensus 401 ~~~~~~~GGav~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d 479 (530)
T 2y3s_A 401 VVALIAYGGKVNAVPADRTAVAQRD-SILKIVYVTTWEDPAQDPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPD 479 (530)
T ss_dssp EEEEEECCGGGGGSCTTSSSCCCCS-CSEEEEEEEEECCTTCHHHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCC
T ss_pred EEEEEecCCccccCCCCcCcccccc-cceeEEEEEecCCCcchHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcC
Confidence 7889999999999999999999999 68999999999988778889999999999887 3311113579999999
Q ss_pred CCCCCCCCCCcchhhhchhhhhhhcccHHHHHHHHhhcCCCCCCcCCCCCCCc
Q 038259 439 LDIGTNNQGYTSIKQASVWGSKYFKNNFKRLVRVKSMVDPHNFFRNEQSIPPL 491 (501)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~yyg~n~~RL~~IK~kyDP~n~F~~~~sI~~~ 491 (501)
.+++.++ .+++. ..|++.|||+||+||++||+||||+|+|+++|+|+|+
T Consensus 480 ~~~~~~~-~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~ 528 (530)
T 2y3s_A 480 VDLADEE-WNTSG---VPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVP 528 (530)
T ss_dssp GGGGCTT-TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred ccccccc-cccch---hHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCC
Confidence 8875211 11221 2499999999999999999999999999999999986
No 9
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=2.5e-67 Score=559.41 Aligned_cols=444 Identities=21% Similarity=0.403 Sum_probs=351.5
Q ss_pred ceecCCCCChhhHhhhccccccCCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccCCCEEEE
Q 038259 7 VTYTKINSSYSSVLNFTIQNFRFSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVSQVPFVVI 86 (501)
Q Consensus 7 ~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~~~vvI 86 (501)
.|++|+++.|.... .+|+......|.+||+|+|++||+++|++|+++++|+.||||||++.+.+.+..+++++|
T Consensus 19 ~~~~~~~~~y~~~~------~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~~~~gvvI 92 (503)
T 1zr6_A 19 EFHEEDSEGWDMDG------TAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAKGGGHSYGSYGFGGEDGHLML 92 (503)
T ss_dssp EECCTTSHHHHHHT------SCSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTTTSSSSCEEE
T ss_pred eecCCCccchHHHh------hhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCCcccCCCCcEEE
Confidence 68999999999863 246555567999999999999999999999999999999999999987655312248999
Q ss_pred EccCCCCeEEcCCCCEEEEcCCCcHHHHHHHHHHhCCCceeccCCCCcccccccccCCCCCCcccccccccccEeEEEEE
Q 038259 87 DLLNLSEINVDAVAKTAWVQAGATLGQLYYRIAEKSKNLGFPAGLCPTVGAGGHISGGGYGVMLRKFGLAADNIVDAHLI 166 (501)
Q Consensus 87 dl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vV 166 (501)
||++|++|++| +.++|+||||+++.+|+++|.+++ ++.++.|.|+++||||+++|||+|+++++||+++|+|++++||
T Consensus 93 dl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~~vV 170 (503)
T 1zr6_A 93 ELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHVLGGGYGFATHTHGLTLDWLIGATVV 170 (503)
T ss_dssp ECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHHHHCCCSTTHHHHCCGGGGEEEEEEE
T ss_pred ECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhhcCCCCCcccccccChhheEEEEEEE
Confidence 99999999999 888999999999999999998775 5788899999999999999999999999999999999999999
Q ss_pred ecCCcEEe-ccCCCcchHHHhhccccCCceEEEEEEEEEEEecCCeeEEEEEEecc-hhhHHHHHHHHHHHHHh-hccCc
Q 038259 167 DANGRFLD-RESMGEDLFWAIRGGGIGASFGVIVAWKVRLVPVPSTVTRCLVTRNL-EQNATKIVHKWQYVANK-LHEDL 243 (501)
Q Consensus 167 ~~~G~v~~-~~~~~~dl~~a~rg~~~~g~~Givt~~t~k~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~p~~l 243 (501)
++||++++ +..+|+||||++|||+ |+|||||+++||++|.|+....+.+.+++ .+.+.++++.|+++... +|+++
T Consensus 171 ~a~G~i~~~~~~~~~dL~~a~rG~~--g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 248 (503)
T 1zr6_A 171 LADASIVHVSETENADLFWALRGGG--GGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVAGLKALQDWAQNTMPREL 248 (503)
T ss_dssp CTTSCEEEEBTTBSHHHHHHHTTCC--SSSCEEEEEEECCEECCSCEEEEEEEECCCHHHHHHHHHHHHHHHHHTCCTTB
T ss_pred ecCCCEEEeCCCCCccHHHHHhccC--CCcEEEEEEEEEEEecCceeEEEEEEEeCCHHHHHHHHHHHHHHHhhcCChhH
Confidence 99999997 6667899999999999 79999999999999999877677776654 33467889999998876 89988
Q ss_pred eEEEEEecCCceeEEEEEEEEeCCccChhhhHhhhcCcCCC--CcccceecchHHHHHhhcCCCCCCchhhhhcccccCC
Q 038259 244 FIEVTLTRMNSTMVATFSLVFQGGVDRLLPLMQESFPELGL--TKEDCTEMSWIESVHNLAGFDKGQSLDLLLDRNARSN 321 (501)
Q Consensus 244 ~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (501)
+..+.+.. ..+.+..+|+|+.++..+++++++..++. ....+..++|.+....+.. .. .++...+
T Consensus 249 ~~~~~~~~----~~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~p-- 315 (503)
T 1zr6_A 249 SMRLEINA----NALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYGQINTYLY---GA----DLNITYN-- 315 (503)
T ss_dssp CCEEEEET----TEEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHTTSCT---TC----CSSCSSC--
T ss_pred EEEEEEeC----CeEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeCCHHHHHHHHcC---CC----cccccCC--
Confidence 88777653 24566788999988888877765443433 1234566778764432211 00 0011001
Q ss_pred cccccCCccccccccccccCCCCCHHHHHHHHHHHh-hcCC---ceEEEEEEecCC---cCCCCCCCCCCCcccCCCeEE
Q 038259 322 GVVVNGTTKDFFKGKSDYVKQPIPQNAFEGIYDKFY-EEEG---QRAFMVLVPYGG---KMSEISESETPFPHRAGNLYK 394 (501)
Q Consensus 322 ~~~~~g~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~-~~~~---~~~~i~~~~~Gg---av~~~~~~~taf~~R~~~~~~ 394 (501)
.| .+..|+.++.++.+ ++.+.++.+++.+. ..+. ..+.+.++++|| ++.+++.++++|+||+ ..|+
T Consensus 316 ----~g-~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av~~~~~~~ta~~~R~-~~~~ 388 (503)
T 1zr6_A 316 ----YD-VHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALAAVSNDETAYAHRD-QLWL 388 (503)
T ss_dssp ----CC-CCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSGGGSCTTTSSCCCTT-CSEE
T ss_pred ----CC-ccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhhcCCCcccCCccccc-ceeE
Confidence 01 12345667777776 88899999999887 5322 235688899999 8888888999999999 5888
Q ss_pred EEEEeee-----CCcchhhHHHHHHHHHHhhccccccCCCCccccCCCCCCCCCCCCCCcchhhhchhhhhhhcccHHHH
Q 038259 395 IFYGVAW-----GEDRTSRRHIDWIRRLYGYMTPYVSKNPREAYINYRDLDIGTNNQGYTSIKQASVWGSKYFKNNFKRL 469 (501)
Q Consensus 395 i~~~~~w-----~~~~~~~~~~~wi~~~~~~l~~~~~~~~~g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~yyg~n~~RL 469 (501)
+++...| .+++.++...+|++++.+.+.........|+|+||+|.+++ ..+|++.|||+||+||
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~-----------~~~~~~~~yG~n~~RL 457 (503)
T 1zr6_A 389 WQFYDSIYDYENNTSPYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT-----------KEEAQKLYWRGNLEKL 457 (503)
T ss_dssp EEEEEEETTTTTCCTTTTTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC-----------HHHHHHHHHGGGHHHH
T ss_pred EEEEeeeccccCCCccchHHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc-----------cchHHHHHHHhHHHHH
Confidence 8886666 34444555678887777766554321123799999998864 1379999999999999
Q ss_pred HHHHhhcCCCCCCcCCCCCCCc
Q 038259 470 VRVKSMVDPHNFFRNEQSIPPL 491 (501)
Q Consensus 470 ~~IK~kyDP~n~F~~~~sI~~~ 491 (501)
++||+||||+|+|+++|+|+|.
T Consensus 458 ~~iK~kyDP~~vF~~~~~i~~~ 479 (503)
T 1zr6_A 458 QAIKAKYDPEDVFGNVVSVEPI 479 (503)
T ss_dssp HHHHHHHCTTCTTCCTTSCCCC
T ss_pred HHHHHHhCchhhcCCCCCCCch
Confidence 9999999999999999999885
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=6.9e-66 Score=543.66 Aligned_cols=436 Identities=24% Similarity=0.334 Sum_probs=341.8
Q ss_pred CCCCceecCCCCChhhHhhhccccccCCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccCCC
Q 038259 3 SISKVTYTKINSSYSSVLNFTIQNFRFSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVSQVP 82 (501)
Q Consensus 3 ~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~~ 82 (501)
++++.|++|+|+.|++++. +|+......|.+||+|+|++||+++|++|+++++|+.+||||||+.+.+... +
T Consensus 11 ~~~~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~--~ 82 (459)
T 2bvf_A 11 SIQGEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATND--G 82 (459)
T ss_dssp CCSSEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCCS--S
T ss_pred cCCceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccccC--C
Confidence 5679999999999998653 4666667799999999999999999999999999999999999999876544 3
Q ss_pred EEEEEccCCCCeEEcCCCCEEEEcCCCcHHHHHHHHHHhCCCceeccCCCCcccccccccCCCCCCcccccccccccEeE
Q 038259 83 FVVIDLLNLSEINVDAVAKTAWVQAGATLGQLYYRIAEKSKNLGFPAGLCPTVGAGGHISGGGYGVMLRKFGLAADNIVD 162 (501)
Q Consensus 83 ~vvIdl~~l~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~ 162 (501)
+++|||++|++|++|+++.+|+||||+++.+|+++|.++| +.+++|.|+++||||+++|||+|+++++||+.+|+|++
T Consensus 83 gvvi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~ 160 (459)
T 2bvf_A 83 GIVLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILG 160 (459)
T ss_dssp SEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT--EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEE
T ss_pred eEEEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC--CEecCCCCCCcccceeecCCCCccccccccCHhHhEEE
Confidence 8999999999999999999999999999999999999885 78888999999999999999999999999999999999
Q ss_pred EEEEecCCcEEe-ccCCCcchHHHhhccccCCceEEEEEEEEEEEecCCeeEEEEEEecchhhHH--HHHHHHHHHHHhh
Q 038259 163 AHLIDANGRFLD-RESMGEDLFWAIRGGGIGASFGVIVAWKVRLVPVPSTVTRCLVTRNLEQNAT--KIVHKWQYVANKL 239 (501)
Q Consensus 163 ~~vV~~~G~v~~-~~~~~~dl~~a~rg~~~~g~~Givt~~t~k~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 239 (501)
+|||++||++++ +..+|+||||++|||+ |+|||||+++||++|.|+.+....+.|+..+ +. ++++.|+++...+
T Consensus 161 ~~vV~~~G~i~~~~~~~~~dLf~a~rg~~--g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 237 (459)
T 2bvf_A 161 ATLVTATGDVIYCSDDERPELFWAVRGAG--PNFGVVTEVEVQLYELPRKMLAGFITWAPSV-SELAGLLTSLLDALNEM 237 (459)
T ss_dssp EEEECTTSCEEEEESSSSHHHHHHHHHHG--GGTCEEEEEEEEEEECCCCEEEEEEEECCCH-HHHHHHHHHHHHHHHHT
T ss_pred EEEEcCCCeEEEeCCCCChhhHhHhhccC--CccEEEEEEEEEEEECCCcEEEEEEEechHH-hhHHHHHHHHHHHHHhC
Confidence 999999999997 5667899999999998 9999999999999999766666666676532 44 7888899888777
Q ss_pred ccCceEEEEEec-CCceeEEEEEEEEeCCccChhhhHhhhcCcCC-CCcccceecchHHHHHhhcCCCCCCchhhhhccc
Q 038259 240 HEDLFIEVTLTR-MNSTMVATFSLVFQGGVDRLLPLMQESFPELG-LTKEDCTEMSWIESVHNLAGFDKGQSLDLLLDRN 317 (501)
Q Consensus 240 p~~l~~~~~~~~-~~~~~~i~~~~~~~G~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (501)
|+.+...+.... ..+...+.+...|.|+.++....+.++ .+++ +....+..++|.+...... .....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~- 306 (459)
T 2bvf_A 238 ADHIYPSVFVGVDENRAPSVTVCVGHLGGLDIAERDIARL-RGLGRTVSDSIAVRSYDEVVALNA---------EVGSF- 306 (459)
T ss_dssp TTTCCCEEEEEECTTCCEEEEEEEECCSCHHHHHHHHHHH-HTTSCCSEECCEEECHHHHHHHHH---------HHSCC-
T ss_pred cHhhccccccCcccCCCceEEEEEEEeCCHHHHHHHHHHH-HHhCcchhcceeecCHHHHHhccc---------ccccC-
Confidence 887744332211 123345566778899877766666653 4453 3344566778876432210 00000
Q ss_pred ccCCcccccCCccccccc-cccccCCCCCHHHHHHHHHHHhhcC-Cc-eEEEEEEecCCcCCCCCCCCCCCcccCCCeEE
Q 038259 318 ARSNGVVVNGTTKDFFKG-KSDYVKQPIPQNAFEGIYDKFYEEE-GQ-RAFMVLVPYGGKMSEISESETPFPHRAGNLYK 394 (501)
Q Consensus 318 ~~~~~~~~~g~~~~~~~~-~s~~~~~~~~~~~i~~~~~~~~~~~-~~-~~~i~~~~~Ggav~~~~~~~taf~~R~~~~~~ 394 (501)
+. + ...+.. ++.++++.++.+.++.+++.+.+.+ .. .+.+++. ||++.+ .+.+||+||+. .|
T Consensus 307 ~~-------~--~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--gg~~~~--~~~ta~~~R~~-~~- 371 (459)
T 2bvf_A 307 ED-------G--MSNLWIDREIAMPNARFAEAIAGNLDKFVSEPASGGSVKLEIE--GMPFGN--PKRTPARHRDA-MG- 371 (459)
T ss_dssp CC-------S--CEEEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTEEEEEEEE--CCCCCC--TTCCSSCCCSS-CE-
T ss_pred CC-------C--CcceEeccccccCCCCCHHHHHHHHHHHhhCCCCCceeEEEEe--CCccCC--CCCCCcccCCc-ce-
Confidence 10 1 112222 4666653355666766666665544 33 3344444 887776 56799999994 77
Q ss_pred EEEEeeeCCcc-hhhHHHHHHHHHHhhccccccCCCCccccCCCCCCCCCCCCCCcchhhhchhhhhhhccc-HHHHHHH
Q 038259 395 IFYGVAWGEDR-TSRRHIDWIRRLYGYMTPYVSKNPREAYINYRDLDIGTNNQGYTSIKQASVWGSKYFKNN-FKRLVRV 472 (501)
Q Consensus 395 i~~~~~w~~~~-~~~~~~~wi~~~~~~l~~~~~~~~~g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~yyg~n-~~RL~~I 472 (501)
+.+...|.+++ .++.+.+|++++++.+.++......|+|+||+|.+.+ +|...|||+| |+||++|
T Consensus 372 ~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~~-------------~~~~~~yG~~n~~rL~~i 438 (459)
T 2bvf_A 372 VLALAEWSGAAPGSEKYPELARELDAALLRAGVTTSGFGLLNNNSEVTA-------------EMVAEVYKPEVYSRLAAV 438 (459)
T ss_dssp EEEEEEECTTSTTTTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCCH-------------HHHHHHHCHHHHHHHHHH
T ss_pred EEEEEEeCCCccchHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcch-------------HHHHHHhCcchHHHHHHH
Confidence 88899998765 6677899999999999998521134799999997622 7899999986 9999999
Q ss_pred HhhcCCCCCCcCCCCCCC
Q 038259 473 KSMVDPHNFFRNEQSIPP 490 (501)
Q Consensus 473 K~kyDP~n~F~~~~sI~~ 490 (501)
|+||||+|+|+++|+|+|
T Consensus 439 K~kyDP~~vF~~~~~I~p 456 (459)
T 2bvf_A 439 KREYDPENRFRHNYNIDP 456 (459)
T ss_dssp HHHHCTTCCCCSSSCCCC
T ss_pred HHHhCcccccCCCCCCCC
Confidence 999999999999999998
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=2.7e-40 Score=354.52 Aligned_cols=190 Identities=18% Similarity=0.285 Sum_probs=168.3
Q ss_pred ccCCCCCCCCccEEEecCCHHHHHHHHHHHHH--C-CCcEEEEcCCCCCCCCCcccCCCEEEEEccCCCCe------EEc
Q 038259 27 FRFSTPNTPKPLVIITPLDVSQVQAAIKCSKK--H-GLQIRLRSGGHDFEGLSYVSQVPFVVIDLLNLSEI------NVD 97 (501)
Q Consensus 27 ~r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~--~-~~~~~v~ggGh~~~g~~~~~~~~~vvIdl~~l~~i------~~d 97 (501)
..|+......|.+|++|+|++||+++|++|++ + ++|+.++|||||+.|.+.+.+ +++|||++||+| ++|
T Consensus 59 ~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~~G~G~~~~g~~~~~~--gvvi~l~~m~~i~~~~~~~~d 136 (534)
T 1w1o_A 59 TDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPG--GVVVNMASLGDAAAPPRINVS 136 (534)
T ss_dssp CCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSSSTTCCTT--SEEEEGGGGGCSSSSCSEEEC
T ss_pred ccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCcCCCC--eEEEECccccccccCccEEEc
Confidence 34766677899999999999999999999998 6 999999999999998877654 899999999984 889
Q ss_pred CCCCEEEEcCCCcHHHHHHHHHHhCCCceecc-CCCCcccccccccCCCCCCcccccccccccEeEEEEEecCCcEEe-c
Q 038259 98 AVAKTAWVQAGATLGQLYYRIAEKSKNLGFPA-GLCPTVGAGGHISGGGYGVMLRKFGLAADNIVDAHLIDANGRFLD-R 175 (501)
Q Consensus 98 ~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~-g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~v~~-~ 175 (501)
+++.+|+||||+++.+|++++.++|+ ..+. +....++|||.+++||+|..+++||..+|+|++++||++||++++ +
T Consensus 137 ~~~~~v~v~aGv~~~~l~~~~~~~Gl--~~~~~~~~~~~tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~ 214 (534)
T 1w1o_A 137 ADGRYVDAGGEQVWIDVLRASLARGV--APRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCS 214 (534)
T ss_dssp TTSSEEEEETTCBHHHHHHHHHTTTE--EESCCCSSCCSBHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEE
T ss_pred CCCCEEEECCCcCHHHHHHHHHHCCC--cccCCCCCCCEEeceeccCCCccccccccccHhhhEEEEEEEeCCccEEEEC
Confidence 88899999999999999999999874 3332 444678899999999999999999999999999999999999997 5
Q ss_pred cCCCcchHHHhhccccCCceEEEEEEEEEEEecCCeeEEEEEEecch
Q 038259 176 ESMGEDLFWAIRGGGIGASFGVIVAWKVRLVPVPSTVTRCLVTRNLE 222 (501)
Q Consensus 176 ~~~~~dl~~a~rg~~~~g~~Givt~~t~k~~p~~~~~~~~~~~~~~~ 222 (501)
..+|+||||++|||+ |+|||||+++||++|.|+...++.+.|...
T Consensus 215 ~~~~~dL~~~~rGs~--G~~GIVt~~~l~l~p~~~~~~~~~~~~~~~ 259 (534)
T 1w1o_A 215 KQLNADLFDAVLGGL--GQFGVITRARIAVEPAPARARWVRFVYTDF 259 (534)
T ss_dssp SSSSHHHHHHHTTCT--TCSEEEEEEEEEEEECCSEEEEEEEEESCH
T ss_pred CCCChhhHhhhcCCC--CCcEEEEEEEEEEEECCcceEEEEEEeCCH
Confidence 567899999999999 899999999999999999776666777543
No 12
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=4.4e-35 Score=312.67 Aligned_cols=200 Identities=22% Similarity=0.327 Sum_probs=168.5
Q ss_pred ccCCCCCCCCccEEEecCCHHHHHHHHHHHHH-CCCcEEEEcCCCCCCCCCcccCCCEEEEEccCCCCeEEcC-----CC
Q 038259 27 FRFSTPNTPKPLVIITPLDVSQVQAAIKCSKK-HGLQIRLRSGGHDFEGLSYVSQVPFVVIDLLNLSEINVDA-----VA 100 (501)
Q Consensus 27 ~r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~-~~~~~~v~ggGh~~~g~~~~~~~~~vvIdl~~l~~i~~d~-----~~ 100 (501)
..|+......|.+||+|+|++||+++|++|++ +++||++||||||+.|.+...+ +++|||++||+|++|. +.
T Consensus 52 ~d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~~--gvvidl~~m~~i~i~~~~~~~~~ 129 (524)
T 2exr_A 52 RDFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAEG--GLVVDMSTTAENHFEVGYLSGGD 129 (524)
T ss_dssp CCTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCTT--SEEEEGGGGTTSCEEEEECCSSS
T ss_pred ccccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCCC--EEEEECcCCCCcEEeecccCCCC
Confidence 34766677899999999999999999999996 9999999999999998776544 8999999999987776 55
Q ss_pred --CEEEEcCCCcHHHHHHH-HHHhCCCcee-ccCCCCcccccccccCCCCCCcccccccccccEeEEEEEecCCcEEe-c
Q 038259 101 --KTAWVQAGATLGQLYYR-IAEKSKNLGF-PAGLCPTVGAGGHISGGGYGVMLRKFGLAADNIVDAHLIDANGRFLD-R 175 (501)
Q Consensus 101 --~~v~v~~G~~~~~l~~~-l~~~g~~l~~-~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~v~~-~ 175 (501)
.+|+||||+++.+++++ |.++|+ .. ..+.++.++|||.++++|.|..+.+||.++|+|++++||++||++++ .
T Consensus 130 ~~~~v~v~aGv~~~~l~~~~l~~~Gl--~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~ 207 (524)
T 2exr_A 130 ATAFVDVSGGALWEDVLKRCVSEYGL--APRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCS 207 (524)
T ss_dssp SSEEEEEETTCBHHHHHHHHHHHHSE--ECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEE
T ss_pred CceEEEEeCCcCHHHHHHHHHHHcCC--CCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEEC
Confidence 79999999999998655 548874 32 22344568899999999999999999999999999999999999997 4
Q ss_pred cCCCcchHHHhhccccCCceEEEEEEEEEEEecCCeeEEEEEEecchhhHHHHHHHH
Q 038259 176 ESMGEDLFWAIRGGGIGASFGVIVAWKVRLVPVPSTVTRCLVTRNLEQNATKIVHKW 232 (501)
Q Consensus 176 ~~~~~dl~~a~rg~~~~g~~Givt~~t~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (501)
..+|+||||++|||+ |+|||||++|||++|.|+...++.+.|+..+.+.+.+..+
T Consensus 208 ~~~~~dL~~~~~Gs~--GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~~l 262 (524)
T 2exr_A 208 EIENSELFFSVLGGL--GQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEWL 262 (524)
T ss_dssp SSSSHHHHHHHTTCT--TSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHH
T ss_pred CCCChhHHhHhhcCC--CccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHHHH
Confidence 456899999999999 9999999999999999997777777776544444444333
No 13
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=3.2e-35 Score=309.52 Aligned_cols=206 Identities=23% Similarity=0.300 Sum_probs=178.8
Q ss_pred cccCCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccCCCEEEEEccCCCCe-EEcCCCCEEE
Q 038259 26 NFRFSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVSQVPFVVIDLLNLSEI-NVDAVAKTAW 104 (501)
Q Consensus 26 n~r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~~~vvIdl~~l~~i-~~d~~~~~v~ 104 (501)
+..|+......|.+||+|+|++||+++|++|+++++|++++|||||+.|.+.... ++++|||++||+| ++|+++.+++
T Consensus 41 ~~d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~~-ggvvIdl~~m~~i~~id~~~~~v~ 119 (476)
T 3pm9_A 41 ITEERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHN-GEVVISLKRMDKIREIDTSSNTIT 119 (476)
T ss_dssp HBCTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCCS-SCEEEECTTCCCEEEEETTTTEEE
T ss_pred hcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCCC-CcEEEEeeCCCceEEEcCCCCeEE
Confidence 3457766778999999999999999999999999999999999999998776543 5899999999998 8999999999
Q ss_pred EcCCCcHHHHHHHHHHhCCCceeccCCCCcccccccccCCCCCCcccccccccccEeEEEEEecCCcEEe------ccCC
Q 038259 105 VQAGATLGQLYYRIAEKSKNLGFPAGLCPTVGAGGHISGGGYGVMLRKFGLAADNIVDAHLIDANGRFLD------RESM 178 (501)
Q Consensus 105 v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~v~~------~~~~ 178 (501)
||||+++.+|+++|.++|+.+...++.+..++|||+++++++|+.+.+||.++|+|++++||++||++++ .+..
T Consensus 120 V~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~ 199 (476)
T 3pm9_A 120 VEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDNT 199 (476)
T ss_dssp EETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCCS
T ss_pred ECCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCCC
Confidence 9999999999999999975334445677778999999999999999999999999999999999999986 2345
Q ss_pred CcchHHHhhccccCCceEEEEEEEEEEEecCCeeEEEEEEecchhhHHHHHHHHHH
Q 038259 179 GEDLFWAIRGGGIGASFGVIVAWKVRLVPVPSTVTRCLVTRNLEQNATKIVHKWQY 234 (501)
Q Consensus 179 ~~dl~~a~rg~~~~g~~Givt~~t~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (501)
++||+|+++|++ |+|||||+++||++|.|+....+.+.|+..+++.+++..+++
T Consensus 200 g~dl~~l~~Gs~--GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 200 GYDLRDLFIGAE--GTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp SCCCHHHHTTST--TSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CcCHHHHhccCC--CCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 789999999999 999999999999999999777777777655555555655544
No 14
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=2e-34 Score=315.41 Aligned_cols=202 Identities=21% Similarity=0.207 Sum_probs=177.9
Q ss_pred CCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCccc---CCCEEEEEccCCCCe-EEcCCCCEEE
Q 038259 29 FSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVS---QVPFVVIDLLNLSEI-NVDAVAKTAW 104 (501)
Q Consensus 29 ~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~---~~~~vvIdl~~l~~i-~~d~~~~~v~ 104 (501)
|...++..|++||+|+|++||+++|++|+++++||+++|||||+.|..... ..++|+|||++||+| +||+++.+++
T Consensus 198 ~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~at 277 (658)
T 4bby_A 198 REGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAH 277 (658)
T ss_dssp HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEE
T ss_pred hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEE
Confidence 666678899999999999999999999999999999999999988655432 125799999999998 9999999999
Q ss_pred EcCCCcHHHHHHHHHHhCCCceeccCCCCcccccccccCCCCCCcccccccccccEeEEEEEecCCcEEe-----ccCCC
Q 038259 105 VQAGATLGQLYYRIAEKSKNLGFPAGLCPTVGAGGHISGGGYGVMLRKFGLAADNIVDAHLIDANGRFLD-----RESMG 179 (501)
Q Consensus 105 v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~v~~-----~~~~~ 179 (501)
||||+++.+|.++|.++|+.+.+.+++...++|||++++++.|+.+.+||.+.|+|+++|||++||++++ ....+
T Consensus 278 VeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aG 357 (658)
T 4bby_A 278 VEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTG 357 (658)
T ss_dssp EETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSS
T ss_pred EecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCC
Confidence 9999999999999999986555667888888999999999999999999999999999999999999985 34567
Q ss_pred cchHHHhhccccCCceEEEEEEEEEEEecCCeeEEEEEEecchhhHHHHHHHH
Q 038259 180 EDLFWAIRGGGIGASFGVIVAWKVRLVPVPSTVTRCLVTRNLEQNATKIVHKW 232 (501)
Q Consensus 180 ~dl~~a~rg~~~~g~~Givt~~t~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (501)
+||+|+++||+ |+|||||++||||+|.|+....+.+.|+..+++.+++..+
T Consensus 358 yDL~~L~iGSE--GTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i 408 (658)
T 4bby_A 358 PDIHHFIMGSE--GTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREI 408 (658)
T ss_dssp SCTHHHHTTCT--TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHH
T ss_pred cCHHHHhccCC--CcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHH
Confidence 99999999999 9999999999999999998877777777544455555443
No 15
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=2.3e-32 Score=287.95 Aligned_cols=199 Identities=19% Similarity=0.235 Sum_probs=168.1
Q ss_pred cCCCCCCCCccEEEecCCHHHHHHHHHHHHHC--CCcEEEEcCCCCCCCCCcccCCCEEEEEccCCCCe-EEcCCCCEEE
Q 038259 28 RFSTPNTPKPLVIITPLDVSQVQAAIKCSKKH--GLQIRLRSGGHDFEGLSYVSQVPFVVIDLLNLSEI-NVDAVAKTAW 104 (501)
Q Consensus 28 r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~--~~~~~v~ggGh~~~g~~~~~~~~~vvIdl~~l~~i-~~d~~~~~v~ 104 (501)
.|.. ....|.++++|+|++||+++|++|+++ ++|+.++|+|||+.+.+... ++++|||++||+| ++|+++++|+
T Consensus 35 ~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~~--~gvvIdl~~l~~i~~~d~~~~~v~ 111 (481)
T 4feh_A 35 GWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNG--GGLVIDMTPLNTIHSIDADTKLVD 111 (481)
T ss_dssp CTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCCT--TSEEEECTTCCCEEEEETTTTEEE
T ss_pred cccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCCc--CeEEEECccCCCceEEcCCCCEEE
Confidence 4754 588999999999999999999999999 79999999999997655433 3899999999998 9999999999
Q ss_pred EcCCCcHHHHHHHHHHhCCCceeccCCCCcccccccccCCCCCCcccccccccccEeEEEEEecCCcEEe-ccC-CCcch
Q 038259 105 VQAGATLGQLYYRIAEKSKNLGFPAGLCPTVGAGGHISGGGYGVMLRKFGLAADNIVDAHLIDANGRFLD-RES-MGEDL 182 (501)
Q Consensus 105 v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~v~~-~~~-~~~dl 182 (501)
||||+++.+|.++|.++|+.+...+|. +.++|||.+++|++|.++..||..+|+|+++++|++||++++ +.. +|+||
T Consensus 112 v~aGv~l~~L~~~l~~~Gl~l~~~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~~dL 190 (481)
T 4feh_A 112 IDAGVNLDQLMKAALPFGLWVPVLPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGEDAEL 190 (481)
T ss_dssp EETTCBHHHHHHHHGGGTEECSCCCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTTHHH
T ss_pred EcCCccHHHHHHHHHHcCCEEEEeCCc-CccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCChHH
Confidence 999999999999999998544333455 457899999999999999999999999999999999999997 555 78999
Q ss_pred HHHhhccccCCceEEEEEEEEEEEecCCeeEEEEEEecchhhHHHHHHHHHH
Q 038259 183 FWAIRGGGIGASFGVIVAWKVRLVPVPSTVTRCLVTRNLEQNATKIVHKWQY 234 (501)
Q Consensus 183 ~~a~rg~~~~g~~Givt~~t~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (501)
||++|||. |++||||+++||++|.++....... +.. .+..++++.+++
T Consensus 191 f~a~rgs~--G~~GIIt~~tl~l~p~~~~~~~~~~-~~~-~~l~~~~~~~~~ 238 (481)
T 4feh_A 191 FWATVGGN--GLTGIIMRATIEMTPTSTAYFIADG-DVT-ASLDETIALHSD 238 (481)
T ss_dssp HHHHTTCT--TTTCEEEEEEEECEECSCSEEEEEE-EEC-SSHHHHHHHHSS
T ss_pred HHHhhccC--CCceEEEEEEEEEEeCCccEEEEEE-EeC-CCHHHHHHHHHH
Confidence 99999998 9999999999999999875433222 122 234556665553
No 16
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=100.00 E-value=1.4e-32 Score=293.73 Aligned_cols=199 Identities=24% Similarity=0.318 Sum_probs=165.6
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCC-CCCcccCCCEEEEEccCCCCe-EEcCCCCEEEEcCCCc
Q 038259 33 NTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFE-GLSYVSQVPFVVIDLLNLSEI-NVDAVAKTAWVQAGAT 110 (501)
Q Consensus 33 ~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~-g~~~~~~~~~vvIdl~~l~~i-~~d~~~~~v~v~~G~~ 110 (501)
....|.+||+|+|++||+++|++|+++++|++++|+|||+. |.+.....++++|||++||+| ++|+++.+|+||||++
T Consensus 53 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~ 132 (520)
T 1wvf_A 53 AAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVT 132 (520)
T ss_dssp GGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCC
T ss_pred cCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCCC
Confidence 45689999999999999999999999999999999999986 654431124899999999999 9999999999999999
Q ss_pred HHHHHHHHHHhCCCceeccC---CCCcccccccccCCCCCCcccccccccccEeEEEEEecCCcEEec---cCCCcchHH
Q 038259 111 LGQLYYRIAEKSKNLGFPAG---LCPTVGAGGHISGGGYGVMLRKFGLAADNIVDAHLIDANGRFLDR---ESMGEDLFW 184 (501)
Q Consensus 111 ~~~l~~~l~~~g~~l~~~~g---~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~v~~~---~~~~~dl~~ 184 (501)
+.+|+++|.++|+. ++.+ ....+||||.+++||.|.. +||..+|+|++++||++||++++. ...++|+|+
T Consensus 133 ~~~l~~~l~~~Gl~--~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~ 208 (520)
T 1wvf_A 133 FGQMYDYIQENNLP--VMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQ 208 (520)
T ss_dssp HHHHHHHHHHTTCS--EECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTT
T ss_pred HHHHHHHHHHcCCc--ccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHh
Confidence 99999999999754 4433 2336889999999998886 999999999999999999999973 235788877
Q ss_pred HhhccccC---------CceEEEEEEEEEEEecCCeeEEEEEEecchhhHHHHHHHHHHHH
Q 038259 185 AIRGGGIG---------ASFGVIVAWKVRLVPVPSTVTRCLVTRNLEQNATKIVHKWQYVA 236 (501)
Q Consensus 185 a~rg~~~~---------g~~Givt~~t~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (501)
+.+|+. | ++|||||+++||++|.|+....+.+.|+..+++.++++.++++.
T Consensus 209 ~~~~~~-Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 209 IFKWGY-GPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLR 268 (520)
T ss_dssp TCSCCS-SCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHHHH
T ss_pred hhcCCC-CcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 766664 2 48999999999999999977777788876555556566666544
No 17
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=2e-31 Score=277.89 Aligned_cols=176 Identities=19% Similarity=0.266 Sum_probs=155.2
Q ss_pred cCCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccCCCEEEEEccCCCCe-EEcCCCCEEEEc
Q 038259 28 RFSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVSQVPFVVIDLLNLSEI-NVDAVAKTAWVQ 106 (501)
Q Consensus 28 r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~~~vvIdl~~l~~i-~~d~~~~~v~v~ 106 (501)
.|+......|.++++|+|++||+++|++| +|+.++||||++.+.+.. ..++++|||++||+| ++|+++.+|+||
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~-~~~g~vi~l~~l~~i~~~d~~~~~v~v~ 86 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEP-GDGGVLLSLAGLPSVVDVDTAARTVRVG 86 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCC-CTTCEEECSTTSCCCEEEETTTTEEEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccC-CCCcEEEEhhhCCCcEEEcCCCCEEEEc
Confidence 48877888999999999999999999998 899999999999887662 224899999999997 999999999999
Q ss_pred CCCcHHHHHHHHHHhCCCceeccCCCCcccccccccCCCCCCcccccccccccEeEEEEEecCCcEEe-ccCCCcchHHH
Q 038259 107 AGATLGQLYYRIAEKSKNLGFPAGLCPTVGAGGHISGGGYGVMLRKFGLAADNIVDAHLIDANGRFLD-RESMGEDLFWA 185 (501)
Q Consensus 107 ~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~v~~-~~~~~~dl~~a 185 (501)
||+++.+|.++|.++|+.++ ..+.++.++|||.+++|++|.. .+||..+|+|+++++|++||++++ +..+|+ ||+
T Consensus 87 aG~~l~~l~~~l~~~Gl~l~-~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~--f~~ 162 (422)
T 2vfr_A 87 GGVRYAELARVVHARGLALP-NMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER--FGG 162 (422)
T ss_dssp TTCBHHHHHHHHHHTTEECS-CCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--GGG
T ss_pred CCCCHHHHHHHHHHcCCccc-CCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--cce
Confidence 99999999999999985432 2467777899999999999976 699999999999999999999997 444455 899
Q ss_pred hhccccCCceEEEEEEEEEEEecCCeeEE
Q 038259 186 IRGGGIGASFGVIVAWKVRLVPVPSTVTR 214 (501)
Q Consensus 186 ~rg~~~~g~~Givt~~t~k~~p~~~~~~~ 214 (501)
++|+. |++||||++|||++|.++....
T Consensus 163 ~~g~~--G~lGvit~~~l~l~p~~~~~~~ 189 (422)
T 2vfr_A 163 AVTSL--GALGVVTSLTLDLEPAYEMEQH 189 (422)
T ss_dssp TSSCT--TTTCEEEEEEEECEECCEEEEE
T ss_pred EEecC--CCCEEEEEEEEEEEecCceEEE
Confidence 99998 9999999999999999885543
No 18
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.98 E-value=3.1e-32 Score=293.15 Aligned_cols=200 Identities=20% Similarity=0.219 Sum_probs=167.9
Q ss_pred CCCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccC--CCEEEEEccCCCCe-EEcCCCCEEEEcCC
Q 038259 32 PNTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVSQ--VPFVVIDLLNLSEI-NVDAVAKTAWVQAG 108 (501)
Q Consensus 32 ~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~--~~~vvIdl~~l~~i-~~d~~~~~v~v~~G 108 (501)
.....|.+||+|+|++||+++|++|+++++|++++|||||+.|.+.... +++++|||++||+| ++|+++.+|+||||
T Consensus 133 ~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aG 212 (584)
T 2uuu_A 133 QVKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVG 212 (584)
T ss_dssp CCCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETT
T ss_pred ccCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCC
Confidence 3456899999999999999999999999999999999999987665431 25899999999999 89999999999999
Q ss_pred CcHHHHHHHHHHhCCCceeccCCCCcccccccccCCCCCCcccccccccccEeEEEEEecCCcEEe----ccCCCcchHH
Q 038259 109 ATLGQLYYRIAEKSKNLGFPAGLCPTVGAGGHISGGGYGVMLRKFGLAADNIVDAHLIDANGRFLD----RESMGEDLFW 184 (501)
Q Consensus 109 ~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~v~~----~~~~~~dl~~ 184 (501)
+++.+|+++|.++|+.+...+++...++|||++++|++|+.+.+||.++|+|++++||++||++++ +...++||+|
T Consensus 213 v~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~ 292 (584)
T 2uuu_A 213 IMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKH 292 (584)
T ss_dssp CBHHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTHH
T ss_pred CcHHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhh
Confidence 999999999999975332223334457899999999999999999999999999999999999886 3456899999
Q ss_pred HhhccccCCceEEEEEEEEEEEecCCeeEEEEEEecchhhHHHHHHHHH
Q 038259 185 AIRGGGIGASFGVIVAWKVRLVPVPSTVTRCLVTRNLEQNATKIVHKWQ 233 (501)
Q Consensus 185 a~rg~~~~g~~Givt~~t~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (501)
+++|++ |+|||||+++||++|.|+....+.+.|+..+++.+++..+.
T Consensus 293 ~~~Gse--GtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 339 (584)
T 2uuu_A 293 IILGSE--GTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIR 339 (584)
T ss_dssp HHTTCT--TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHH
T ss_pred hhccCC--CCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHHH
Confidence 999999 99999999999999999977777777764444444444443
No 19
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.97 E-value=1.4e-30 Score=279.95 Aligned_cols=201 Identities=12% Similarity=0.122 Sum_probs=168.9
Q ss_pred CCCCceecC-CCCChhhHhhhccccccCCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccC-
Q 038259 3 SISKVTYTK-INSSYSSVLNFTIQNFRFSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVSQ- 80 (501)
Q Consensus 3 ~~~~~v~~p-~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~- 80 (501)
|..+.|++| +++.|++.. ..|+......|.+++.|+|++||+++|++|+++++|++++|+|||+.+.+...+
T Consensus 7 ~~~~~~~~p~~~~~y~~~~------~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~ 80 (561)
T 2i0k_A 7 PLPTPPNFPNDIALFQQAY------QNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGA 80 (561)
T ss_dssp CCCCCTTCCTTSCCEEEEE------ECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTC
T ss_pred CCCCceecCCCCHhHHHHH------hhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCC
Confidence 567889999 999999753 348777788999999999999999999999999999999999999865433221
Q ss_pred --CCEEEEEc-cCCCCeEEcC--CCCEEEEcCCCcHHHHHHHHHHhCCCceeccCCCCcccccccccCCCCCCc------
Q 038259 81 --VPFVVIDL-LNLSEINVDA--VAKTAWVQAGATLGQLYYRIAEKSKNLGFPAGLCPTVGAGGHISGGGYGVM------ 149 (501)
Q Consensus 81 --~~~vvIdl-~~l~~i~~d~--~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~g~~------ 149 (501)
.++++||| ++||+|++|+ +.++|+||||+++.+|.++|.++|+.++..++. +.++|||.+++|++|..
T Consensus 81 ~~~~gvvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~~~-~~~TvGG~i~~~~~G~~l~~gG~ 159 (561)
T 2i0k_A 81 NVEKVILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHDLGWANLPAP-GVLSIGGALAVNAHGAALPAVGQ 159 (561)
T ss_dssp CCTTEEEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTTEECSSCCSC-TTCBHHHHHHTTCCCSCCCCTTC
T ss_pred cCCCeEEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcCCcccccCCC-CCcccCCCcccCCcccccccCCc
Confidence 14899999 8999999998 789999999999999999999998654444444 55789999988877765
Q ss_pred ----ccccccccccEeEEEEEecCCc---EEeccCCCcchHHHhhccccCCceEEEEEEEEEEEecCCeeEE
Q 038259 150 ----LRKFGLAADNIVDAHLIDANGR---FLDRESMGEDLFWAIRGGGIGASFGVIVAWKVRLVPVPSTVTR 214 (501)
Q Consensus 150 ----~~~~G~~~d~v~~~~vV~~~G~---v~~~~~~~~dl~~a~rg~~~~g~~Givt~~t~k~~p~~~~~~~ 214 (501)
+.+||..+|+|++++||++||+ +++...+++||+|+++|.| . ||||++|||++|.++....
T Consensus 160 ~~~s~~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~G--~--giIt~~tl~l~p~~~~~~~ 227 (561)
T 2i0k_A 160 TTLPGHTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNLG--R--CFLTSVTMQAGPNFRQRCQ 227 (561)
T ss_dssp CCCTTCCSSCGGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCTT--S--SCEEEEEEECEECCEEEEE
T ss_pred ccccccccccHhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcCC--C--EEEEEEEEEEEECCceEEE
Confidence 6789999999999999999999 6653344799999998655 4 8999999999999875443
No 20
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.96 E-value=1e-28 Score=265.67 Aligned_cols=202 Identities=17% Similarity=0.168 Sum_probs=165.2
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCC-CCCcccCCCEEEEEc-cCCCCe-EEcCCCCEEEEcCCC
Q 038259 33 NTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFE-GLSYVSQVPFVVIDL-LNLSEI-NVDAVAKTAWVQAGA 109 (501)
Q Consensus 33 ~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~-g~~~~~~~~~vvIdl-~~l~~i-~~d~~~~~v~v~~G~ 109 (501)
....|.+||+|+|++||+++|++|+++++||++||+|||+. |.......++++||| ++||+| ++|+++.+|+||||+
T Consensus 67 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv 146 (560)
T 1e8g_A 67 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGV 146 (560)
T ss_dssp TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTC
T ss_pred cccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCC
Confidence 46689999999999999999999999999999999999986 654431124899999 999999 999999999999999
Q ss_pred cHHHHHHHHHHhCCC--ceeccCCCCcccccccccCCCCCCcccccccccccEeEEEEEecCCcEEe-cc--CCCc----
Q 038259 110 TLGQLYYRIAEKSKN--LGFPAGLCPTVGAGGHISGGGYGVMLRKFGLAADNIVDAHLIDANGRFLD-RE--SMGE---- 180 (501)
Q Consensus 110 ~~~~l~~~l~~~g~~--l~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~v~~-~~--~~~~---- 180 (501)
++.+|.++|.++|+. +.+.++..+..||||.++++|.|+. +||..+|+|++++||++||++++ .. ..++
T Consensus 147 ~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~ 224 (560)
T 1e8g_A 147 TYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPE 224 (560)
T ss_dssp BHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGG
T ss_pred CHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccccc
Confidence 999999999999865 4433455556789999999988875 99999999999999999999997 22 1221
Q ss_pred -----------chHHHhhcccc---------CCceEEEEEEEEEEEecCCeeEEEEEEecchhhHHHHHHHHHHHH
Q 038259 181 -----------DLFWAIRGGGI---------GASFGVIVAWKVRLVPVPSTVTRCLVTRNLEQNATKIVHKWQYVA 236 (501)
Q Consensus 181 -----------dl~~a~rg~~~---------~g~~Givt~~t~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (501)
+++|+++++++ +|+|||||++|||++|.|+....+.+.|+..+++.+++..++++.
T Consensus 225 ~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~ 300 (560)
T 1e8g_A 225 TMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLR 300 (560)
T ss_dssp GTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHH
T ss_pred cccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 56676664321 379999999999999999987778888876556666666666554
No 21
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.96 E-value=1.8e-29 Score=265.93 Aligned_cols=190 Identities=14% Similarity=0.178 Sum_probs=155.4
Q ss_pred CCCChhhHhhhccccccCCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCccc---CCCEEEEEc
Q 038259 12 INSSYSSVLNFTIQNFRFSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVS---QVPFVVIDL 88 (501)
Q Consensus 12 ~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~---~~~~vvIdl 88 (501)
+.+.|.+.. ..|+......|.++++|+|++||+++|++|+++++||+++|+|||+.+..... ..++++|||
T Consensus 11 ~i~~y~~~~------~nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdl 84 (540)
T 3js8_A 11 EIPLYKQSF------KNWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDT 84 (540)
T ss_dssp TSCCEEEEE------ECTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEET
T ss_pred ccchhccee------eccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEEC
Confidence 555666643 24888888999999999999999999999999999999999999986322111 124899999
Q ss_pred c-CCCCeEEcCC--CCEEEEcCCCcHHHHHHHHHHhCCCceeccCCCCcccccccccCCCCCCc----------cccccc
Q 038259 89 L-NLSEINVDAV--AKTAWVQAGATLGQLYYRIAEKSKNLGFPAGLCPTVGAGGHISGGGYGVM----------LRKFGL 155 (501)
Q Consensus 89 ~-~l~~i~~d~~--~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~g~~----------~~~~G~ 155 (501)
+ +||+|++|++ ..+|+||||+++.+|+++|.++|+.+...+| .+.++|||.+++|++|.. +++||.
T Consensus 85 s~~Ln~I~vD~~~~~~tVtV~AGv~l~~L~~~L~~~GL~l~~~~g-i~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~ 163 (540)
T 3js8_A 85 TRYLTAMSIDASGPVAKVTAQAGITMEALLTGLEKAGLGVTAAPA-PGDLTLGGVLAINGHGTAIPAKGERRLAGASYGS 163 (540)
T ss_dssp TTTCCCEEEECSSSSEEEEEETTSBHHHHHHHHHHTTEECSCCCS-CSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSC
T ss_pred cCcCCCEEECCCCCccEEEEccCCCHHHHHHHHHHcCCEEEecCC-CCCeEEcccccCCCCccccccccccccccccccc
Confidence 5 6999999985 5799999999999999999999753332245 466899999999999986 589999
Q ss_pred ccccEeEEEEEecCCc-----EEeccCCCcchHHHhhccccCCceEEEEEEEEEEEecCCee
Q 038259 156 AADNIVDAHLIDANGR-----FLDRESMGEDLFWAIRGGGIGASFGVIVAWKVRLVPVPSTV 212 (501)
Q Consensus 156 ~~d~v~~~~vV~~~G~-----v~~~~~~~~dl~~a~rg~~~~g~~Givt~~t~k~~p~~~~~ 212 (501)
.+|+|++++||++||+ +++...+++|| |++|+|. |. ||||++|||++|.++..
T Consensus 164 ~~D~V~~levV~adG~~~~~~i~~~s~~~~DL-~a~r~G~--G~-gIVTevtlrl~P~~~l~ 221 (540)
T 3js8_A 164 ISNLVLSLTAVVYDKASGAYALRKFARNDPQI-APLLAHV--GR-SLIVEATLQAAPNQRLR 221 (540)
T ss_dssp GGGGEEEEEEEEEETTTTEEEEEEEETTSGGG-HHHHTCT--TS-SCEEEEEEEEEECCEEE
T ss_pred HHHhEEEEEEEcCCCCCceeeEEEeCCCChhH-HHHHhcC--CC-eEEEEEEEEEEECCceE
Confidence 9999999999999999 66633468998 5556666 55 69999999999998743
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.96 E-value=8.2e-29 Score=264.80 Aligned_cols=198 Identities=14% Similarity=0.140 Sum_probs=164.9
Q ss_pred CCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccCC----CEEEEEccCCCCe-EEcCCCCEE
Q 038259 29 FSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVSQV----PFVVIDLLNLSEI-NVDAVAKTA 103 (501)
Q Consensus 29 ~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~----~~vvIdl~~l~~i-~~d~~~~~v 103 (501)
|+ .....|.+||+|+|++||+++|++|+++++||.++||||++.|.+...+. ++++|||++||+| ++|+ .++|
T Consensus 39 ~~-~~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v 116 (571)
T 1f0x_A 39 FR-SGQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQV 116 (571)
T ss_dssp SS-SCBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEE
T ss_pred cc-ccCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeE
Confidence 54 34679999999999999999999999999999999999999887765431 3899999999999 7994 5799
Q ss_pred EEcCCCcHHHHHHHHHHhCCCceecc---CCCCcccccccccCCCCCCcccccccccc----------------cEeEEE
Q 038259 104 WVQAGATLGQLYYRIAEKSKNLGFPA---GLCPTVGAGGHISGGGYGVMLRKFGLAAD----------------NIVDAH 164 (501)
Q Consensus 104 ~v~~G~~~~~l~~~l~~~g~~l~~~~---g~~~~vgvgG~~~ggg~g~~~~~~G~~~d----------------~v~~~~ 164 (501)
+||||+++.+|.++|.++|+ .++. +.|..++|||.++++++|..+.+||..+| +|++++
T Consensus 117 ~v~aGv~l~~L~~~l~~~Gl--~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~le 194 (571)
T 1f0x_A 117 LAYPGTTLYSLEKALKPLGR--EPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGID 194 (571)
T ss_dssp EECTTCBHHHHHHHHGGGTE--ECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBC
T ss_pred EEcCCcCHHHHHHHHHhcCc--cCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEE
Confidence 99999999999999999974 4432 33445679999999999999999999999 999999
Q ss_pred EEecCCcEEe-c-----------------cCCCc-----------------chHHHh--hccccCCceEEEEEEEEEEEe
Q 038259 165 LIDANGRFLD-R-----------------ESMGE-----------------DLFWAI--RGGGIGASFGVIVAWKVRLVP 207 (501)
Q Consensus 165 vV~~~G~v~~-~-----------------~~~~~-----------------dl~~a~--rg~~~~g~~Givt~~t~k~~p 207 (501)
||++||++++ . ...++ ||+|++ +||+ |+||| |++|||++|
T Consensus 195 vVl~dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gse--GtlGV-t~~tl~l~p 271 (571)
T 1f0x_A 195 LGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCA--GKLAV-FAVRLDTFE 271 (571)
T ss_dssp CCSSHHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCT--TSSEE-EEEEEECEE
T ss_pred EEcCCCcEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCC--CceeE-EEEEEEEEe
Confidence 9999999885 2 12233 988888 9999 99999 999999999
Q ss_pred cCCeeEEEEEEecchhhHHHHHHHHH
Q 038259 208 VPSTVTRCLVTRNLEQNATKIVHKWQ 233 (501)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (501)
.|+....+.+.|+..+.+.+++..+.
T Consensus 272 ~p~~~~~~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 272 AEKNQQVFYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp CCSSCEEEEEEESCHHHHHHHHHHHH
T ss_pred cCCeEEEEEEEeCCHHHHHHHHHHHH
Confidence 99977777777765444455554444
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.94 E-value=1.1e-26 Score=231.70 Aligned_cols=165 Identities=16% Similarity=0.163 Sum_probs=139.7
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccCCCEEEEEccCCCCeEEcCCCCEEEEcCCCcHH
Q 038259 33 NTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVSQVPFVVIDLLNLSEINVDAVAKTAWVQAGATLG 112 (501)
Q Consensus 33 ~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~~~vvIdl~~l~~i~~d~~~~~v~v~~G~~~~ 112 (501)
....|+++++|+|++||+++|++|+++++|+.++|+|||+.+.+.+.+ +++|||++|++|++| +.+++|+||++|.
T Consensus 51 igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~~~--gvvI~l~~~~~I~~d--~~~v~v~aG~~~~ 126 (322)
T 3tx1_A 51 TGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGIR--GVILHLDLLQTIERN--NTQIVAMSGAKLI 126 (322)
T ss_dssp CCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTCEE--EEEEECTTCCCEEEE--TTEEEEETTSBHH
T ss_pred cCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCCCC--eEEEECCCCCcEEEC--CCEEEEecCcCHH
Confidence 466899999999999999999999999999999999999876554333 899999999999886 4599999999999
Q ss_pred HHHHHHHHhCC-CceeccCCCCcccccccccCCCCCCccccc-ccccccEeEEEEEecCCcEEeccCCCcchHHHhhccc
Q 038259 113 QLYYRIAEKSK-NLGFPAGLCPTVGAGGHISGGGYGVMLRKF-GLAADNIVDAHLIDANGRFLDRESMGEDLFWAIRGGG 190 (501)
Q Consensus 113 ~l~~~l~~~g~-~l~~~~g~~~~vgvgG~~~ggg~g~~~~~~-G~~~d~v~~~~vV~~~G~v~~~~~~~~dl~~a~rg~~ 190 (501)
+|+++|.++|+ +++++.|.+++ |||.+.+++.| | |..+|+|+++++|++||++++.. ++|++|+||++.
T Consensus 127 ~l~~~l~~~Gl~Gle~~~giPgT--VGGav~~NaGg-----yGg~~~d~v~~vevV~~~G~i~~~~--~~~~~~~yR~s~ 197 (322)
T 3tx1_A 127 DTAKFALNESLSGLEFACGIPGS--IGGALHMNAGA-----YGGEISDVLEAATVLTQTGELKKLK--RSELKAAYRFST 197 (322)
T ss_dssp HHHHHHHHTTEESCGGGTTCCSB--HHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEE--GGGCC--CC-CT
T ss_pred HHHHHHHHcCCcccccCCCCcch--hHHHHHhCccC-----cccchHhhEEEEEEEcCCCCEEEec--hHHcCcchhhcc
Confidence 99999999987 67788899877 55777654443 3 78999999999999999999743 269999999997
Q ss_pred cCCceEEEEEEEEEEEecCC
Q 038259 191 IGASFGVIVAWKVRLVPVPS 210 (501)
Q Consensus 191 ~~g~~Givt~~t~k~~p~~~ 210 (501)
|++.+||||+++||++|.|+
T Consensus 198 ~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 198 IAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp TTGGGCEEEEEEEECEECCH
T ss_pred cCCCCEEEEEEEEEEEeCCH
Confidence 55678999999999999874
No 24
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.92 E-value=1.4e-25 Score=225.91 Aligned_cols=166 Identities=11% Similarity=0.012 Sum_probs=142.1
Q ss_pred CCCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccCCCEEEEEccCCCCeEEcC--CCCEEEEcCCC
Q 038259 32 PNTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVSQVPFVVIDLLNLSEINVDA--VAKTAWVQAGA 109 (501)
Q Consensus 32 ~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~~~vvIdl~~l~~i~~d~--~~~~v~v~~G~ 109 (501)
.....|+++|.|+|++||+++|++|+++++|+.++|+|||.++.+. .+ |+||+++ |++|+++. +..+|+|+||+
T Consensus 26 ~igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~-~~--GvVI~l~-~~~i~v~~~~~~~~v~v~AG~ 101 (357)
T 3i99_A 26 GIEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH-YT--GMIVVNR-LNGIEHQQDDDYHRLHVAGGE 101 (357)
T ss_dssp CCSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC-EE--EEEEEEC-CCCEEEEECSSEEEEEEETTS
T ss_pred CCCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC-CC--eEEEEcC-CCceEEeccCCceEEEEeCCC
Confidence 3556899999999999999999999999999999999999886664 44 8999998 99998853 45699999999
Q ss_pred cHHHHHHHHHHhCC-CceeccCCCCcccccccccCCCCCCccccccc-ccccEeEEEEEec-CCcEEeccCCCcchHHHh
Q 038259 110 TLGQLYYRIAEKSK-NLGFPAGLCPTVGAGGHISGGGYGVMLRKFGL-AADNIVDAHLIDA-NGRFLDRESMGEDLFWAI 186 (501)
Q Consensus 110 ~~~~l~~~l~~~g~-~l~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~-~~d~v~~~~vV~~-~G~v~~~~~~~~dl~~a~ 186 (501)
+|.+|.+++.++|+ ++++..|++++ .||+.+++.+.||. ++|+|+++++|++ +|++++.. +.||+|+|
T Consensus 102 ~~~~l~~~a~~~Gl~GlE~l~gIPGt-------VGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~--~~dl~f~Y 172 (357)
T 3i99_A 102 DWPSLVSWCVEQGIGGLENLALIPGC-------AGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLT--MEECQFGY 172 (357)
T ss_dssp BHHHHHHHHHHTTCTTCGGGTTCCSB-------GGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGCCBT
T ss_pred cHHHHHHHHHHcCCcCccccCCCCch-------hHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEe--HHHcCccc
Confidence 99999999999987 56666666654 34677788889996 8999999999999 99999743 35999999
Q ss_pred hccccC---CceEEEEEEEEEEEecCC
Q 038259 187 RGGGIG---ASFGVIVAWKVRLVPVPS 210 (501)
Q Consensus 187 rg~~~~---g~~Givt~~t~k~~p~~~ 210 (501)
|++.|. +++||||+++|||+|.++
T Consensus 173 R~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 173 RDSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp TBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred ccccCCCccCCCEEEEEEEEEEEeCCc
Confidence 999743 379999999999999764
No 25
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.92 E-value=8.6e-26 Score=226.67 Aligned_cols=163 Identities=20% Similarity=0.234 Sum_probs=138.5
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccCCCEEEEEccCCCCeEEcCCCCEEEEcCCCcHH
Q 038259 33 NTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVSQVPFVVIDLLNLSEINVDAVAKTAWVQAGATLG 112 (501)
Q Consensus 33 ~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~~~vvIdl~~l~~i~~d~~~~~v~v~~G~~~~ 112 (501)
....|.++++|+|++||+++|++|+++++|+.++|||||+.+.+.+.+ +++|||++|++|++| ..+++||||+++.
T Consensus 45 ~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~~--gvvI~l~~m~~i~id--~~~v~v~aGv~~~ 120 (326)
T 1hsk_A 45 TGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIR--GIVISLLSLDHIEVS--DDAIIAGSGAAII 120 (326)
T ss_dssp CCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCEE--EEEEECTTCCCEEEE--TTEEEEETTSBHH
T ss_pred cCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCCC--eEEEEeCCCCceEEc--CCEEEEeCCCcHH
Confidence 466899999999999999999999999999999999999886555443 899999999999987 3699999999999
Q ss_pred HHHHHHHHhCC-CceeccCCCCcccccccccCCCCCCcccccc-cccccEeEEEEEecCCcEEeccCCCcchHHHhhccc
Q 038259 113 QLYYRIAEKSK-NLGFPAGLCPTVGAGGHISGGGYGVMLRKFG-LAADNIVDAHLIDANGRFLDRESMGEDLFWAIRGGG 190 (501)
Q Consensus 113 ~l~~~l~~~g~-~l~~~~g~~~~vgvgG~~~ggg~g~~~~~~G-~~~d~v~~~~vV~~~G~v~~~~~~~~dl~~a~rg~~ 190 (501)
+|.++|.++|+ +|++.++.+++ |||.+.+++.| || .++|+|+++++|++||++++... .|++|+||.+.
T Consensus 121 ~l~~~l~~~Gl~gLe~~~~~Pgt--vGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~i~~~~~--~~~~~gyr~~~ 191 (326)
T 1hsk_A 121 DVSRVARDYALTGLEFACGIPGS--IGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGSLIKLTT--KELELDYRNSI 191 (326)
T ss_dssp HHHHHHHHTTEESCGGGTTCCSB--HHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEET--TTTTCBTTBCH
T ss_pred HHHHHHHHCCCccccccCCCcch--hhHHHhccccc-----CchhhhhhEEEEEEEeCCCCEEEECh--HHcCCCccccc
Confidence 99999999986 56677777764 77888766554 78 89999999999999999997433 38899999864
Q ss_pred cCCceEEEEEEEEEEEec
Q 038259 191 IGASFGVIVAWKVRLVPV 208 (501)
Q Consensus 191 ~~g~~Givt~~t~k~~p~ 208 (501)
+.+.-||||+++||++|.
T Consensus 192 l~s~ggIIt~~~l~l~p~ 209 (326)
T 1hsk_A 192 IQKEHLVVLEAAFTLAPG 209 (326)
T ss_dssp HHHTTCEEEEEEEECEEC
T ss_pred cCCCCEEEEEEEEEEEcC
Confidence 222129999999999997
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.91 E-value=2.9e-24 Score=215.80 Aligned_cols=165 Identities=16% Similarity=0.055 Sum_probs=139.6
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccCCCEEEEEccCCCCeE-EcCCC-CEEEEcCCCc
Q 038259 33 NTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVSQVPFVVIDLLNLSEIN-VDAVA-KTAWVQAGAT 110 (501)
Q Consensus 33 ~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~~~vvIdl~~l~~i~-~d~~~-~~v~v~~G~~ 110 (501)
....|++++.|+|++||+++|++|+++++|+.++|||||.++.+. .+ ++||+|+ |+.|. ++.++ .+++|+||++
T Consensus 11 igg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~-~~--GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~ 86 (340)
T 1uxy_A 11 IDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-YR--GTVIINR-IKGIEIHDEPDAWYLHVGAGEN 86 (340)
T ss_dssp CCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC-EE--EEEEEEC-CCCEEEEECSSEEEEEEETTSB
T ss_pred CCccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC-CC--eEEEEcc-CCCcEEEecCCCeEEEEecCCC
Confidence 345799999999999999999999999999999999999886553 33 8999996 99985 66666 6999999999
Q ss_pred HHHHHHHHHHhCC-CceeccCCCCcccccccccCCCCCCccccccc-ccccEeEEEEEec-CCcEEeccCCCcchHHHhh
Q 038259 111 LGQLYYRIAEKSK-NLGFPAGLCPTVGAGGHISGGGYGVMLRKFGL-AADNIVDAHLIDA-NGRFLDRESMGEDLFWAIR 187 (501)
Q Consensus 111 ~~~l~~~l~~~g~-~l~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~-~~d~v~~~~vV~~-~G~v~~~~~~~~dl~~a~r 187 (501)
|.+|.+++.++|+ ++++..|++++ .||+..++.+.||. ++|+|+++++|++ +|++++... .|++|+||
T Consensus 87 ~~~l~~~~~~~Gl~Gle~~~gIPGt-------VGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~~--~d~~~gYR 157 (340)
T 1uxy_A 87 WHRLVKYTLQEGMPGLENLALIPGC-------VGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLTA--KECRFGYR 157 (340)
T ss_dssp HHHHHHHHHHTTCCSCGGGTTCCSB-------GGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEET--GGGTCBTT
T ss_pred HHHHHHHHHHCCCCccccccCCccc-------hhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEeH--HHhccccC
Confidence 9999999999986 55555555544 44777788888995 8999999999996 999987432 69999999
Q ss_pred ccccCC---ceEEEEEEEEEEEecCC
Q 038259 188 GGGIGA---SFGVIVAWKVRLVPVPS 210 (501)
Q Consensus 188 g~~~~g---~~Givt~~t~k~~p~~~ 210 (501)
++.|.+ ++||||+++||+.|.+.
T Consensus 158 ~s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 158 DSIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp BCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred cCccCCcCCCCEEEEEEEEEEEcCCC
Confidence 986434 59999999999999864
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.87 E-value=1.2e-22 Score=197.08 Aligned_cols=153 Identities=18% Similarity=0.161 Sum_probs=125.9
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccCCCEEEEEccCCCCeEEcCCCCEEEEcCCCcHH
Q 038259 33 NTPKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVSQVPFVVIDLLNLSEINVDAVAKTAWVQAGATLG 112 (501)
Q Consensus 33 ~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~~~vvIdl~~l~~i~~d~~~~~v~v~~G~~~~ 112 (501)
....|+ +|+|+|++||+++| ++|+.++|+|||.++.+.+.+ ++++|+|++|++|++| . +|+||++|.
T Consensus 19 igg~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~-~GvVI~l~~~~~I~vd--~---~v~aG~~~~ 85 (268)
T 2gqt_A 19 VGGPAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVP-ERVIRLAGEFQTYDLK--G---WVGAGTLLP 85 (268)
T ss_dssp CCCEEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCS-SEEEEECGGGGCBCTT--S---EEETTSBHH
T ss_pred cCcceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcC-CeEEEEcCCCCCcEEc--C---EEECCCCHH
Confidence 345677 99999999999999 899999999999887665442 3899999999999875 2 999999999
Q ss_pred HHHHHHHHhCC-CceeccCCCCcccccccccCCCCCCcccccc-cccccEeEEEEEecCCcEEeccCCCcchHHHhhccc
Q 038259 113 QLYYRIAEKSK-NLGFPAGLCPTVGAGGHISGGGYGVMLRKFG-LAADNIVDAHLIDANGRFLDRESMGEDLFWAIRGGG 190 (501)
Q Consensus 113 ~l~~~l~~~g~-~l~~~~g~~~~vgvgG~~~ggg~g~~~~~~G-~~~d~v~~~~vV~~~G~v~~~~~~~~dl~~a~rg~~ 190 (501)
+|.+++.++|+ ++++..|.+++ .||+.+++++.|| .++|+|+++++| +||++++.. +.|++|+||++.
T Consensus 86 ~l~~~~~~~Gl~Gle~~~giPGt-------vGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~--~~~l~~~YR~s~ 155 (268)
T 2gqt_A 86 LLVQEAARAGLSGLEGLLGIPAQ-------VGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYC--PEELGFGYRKSH 155 (268)
T ss_dssp HHHHHHHHTTEESCGGGTTCCCB-------HHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEEC--GGGSCCBTTBCC
T ss_pred HHHHHHHHcCCcCCccccCccch-------hHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEc--hHHcccccCCCC
Confidence 99999999985 44455555543 4466667777899 689999999999 999999743 258999999997
Q ss_pred cCCceEEEEEEEEEEEecC
Q 038259 191 IGASFGVIVAWKVRLVPVP 209 (501)
Q Consensus 191 ~~g~~Givt~~t~k~~p~~ 209 (501)
|.+. ||||+++||++|.+
T Consensus 156 ~~~~-gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 156 LPPG-GIVTRVRLKLKERP 173 (268)
T ss_dssp CSTT-CEEEEEEECCEECC
T ss_pred cCCC-ceEEEEEEEEEeCC
Confidence 5432 49999999999974
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.79 E-value=2.7e-19 Score=168.69 Aligned_cols=118 Identities=21% Similarity=0.243 Sum_probs=99.2
Q ss_pred eEEcCCCCEEEEcCCCcHHHHHHHHHHhCCCceeccCCCCcccccccccCCCCCCcccccccccccEeEEEEEecCCcEE
Q 038259 94 INVDAVAKTAWVQAGATLGQLYYRIAEKSKNLGFPAGLCPTVGAGGHISGGGYGVMLRKFGLAADNIVDAHLIDANGRFL 173 (501)
Q Consensus 94 i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~v~ 173 (501)
|++|+++.+|+||||+++.+|+++|.++|+.+...+|.++. +|||++++|++| .+||.. |+|++++||++||+++
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~ 75 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRV 75 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEE
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEE
Confidence 47899999999999999999999999987432222355555 899999999988 899999 9999999999999998
Q ss_pred e-cc-----CCCcchHHHhhccccCCceEEEEEEEEEEEecCCeeEEEEEE
Q 038259 174 D-RE-----SMGEDLFWAIRGGGIGASFGVIVAWKVRLVPVPSTVTRCLVT 218 (501)
Q Consensus 174 ~-~~-----~~~~dl~~a~rg~~~~g~~Givt~~t~k~~p~~~~~~~~~~~ 218 (501)
+ +. ..++||||+++|++ |+|||||+++||++|.++....+.+.
T Consensus 76 ~~~~~~~kn~~gydl~~~~~Gs~--G~lGIVt~~tlrl~p~~~~~~~~~~~ 124 (219)
T 2yvs_A 76 RAGGVVVKNVQGYDLVRLFVGSF--GLLGRAEEVVLRLRPGRAQAFLRRPF 124 (219)
T ss_dssp EEECSSCSSSSCSCHHHHHTTCT--TTTCEEEEEEEECEECSEEEEEEEEC
T ss_pred EECCccccCCCCcchHHHhccCC--CceEEEEEEEEEEEECCcccEEEEEe
Confidence 6 22 24589999999998 99999999999999999866554443
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.32 E-value=4e-07 Score=89.19 Aligned_cols=158 Identities=20% Similarity=0.146 Sum_probs=102.3
Q ss_pred CccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCC-CcccCCCEEEEEccC---CCCeEEcCCCCEEEEcCCCcH
Q 038259 36 KPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGL-SYVSQVPFVVIDLLN---LSEINVDAVAKTAWVQAGATL 111 (501)
Q Consensus 36 ~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~-~~~~~~~~vvIdl~~---l~~i~~d~~~~~v~v~~G~~~ 111 (501)
.|.-++.|+|.+|+.++++. ++.+..+.|||++.... .......+++||+++ |+.|+.+ +..+++|+|+++
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~---~~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i~~~--~~~l~iGA~~tl 78 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQ---LGSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREE--GSTVVIGAMTVE 78 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEE--TTEEEEETTCBH
T ss_pred CcceEECCCCHHHHHHHHHh---cCCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCcH
Confidence 45678999999999999975 34579999999996431 111111379999984 7788774 446999999999
Q ss_pred HHHHHH-HHHhCC-Ccee----ccCCC--CcccccccccCCCCCCcccccccccccEe----EEEEEecCCcEEeccCCC
Q 038259 112 GQLYYR-IAEKSK-NLGF----PAGLC--PTVGAGGHISGGGYGVMLRKFGLAADNIV----DAHLIDANGRFLDRESMG 179 (501)
Q Consensus 112 ~~l~~~-l~~~g~-~l~~----~~g~~--~~vgvgG~~~ggg~g~~~~~~G~~~d~v~----~~~vV~~~G~v~~~~~~~ 179 (501)
.+|.+. +.+.++ +|.. ..|.. ...+|||.+.++.. .+.....++ .+++..++|+ .+...
T Consensus 79 ~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~------~~D~~~~l~Al~A~v~~~~~~G~-r~i~~-- 149 (287)
T 1ffv_C 79 NDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP------GNDHPALSIAVEAHFVLEGPNGR-RTVPA-- 149 (287)
T ss_dssp HHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT------TCSHHHHHHHTTCEEEEEETTEE-EEEES--
T ss_pred HHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC------cHHHHHHHHHcCcEEEEEcCCce-EEEEH--
Confidence 999962 333333 2221 22321 12468899887642 122222222 6888999993 33222
Q ss_pred cchHHHhhccccCCceEEEEEEEEEEEec
Q 038259 180 EDLFWAIRGGGIGASFGVIVAWKVRLVPV 208 (501)
Q Consensus 180 ~dl~~a~rg~~~~g~~Givt~~t~k~~p~ 208 (501)
.|+|..+|-+.+.. -.|||+++|.+.+.
T Consensus 150 ~df~~g~~~t~l~~-~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 150 DGFFLGTYMTLLEE-NEVMVEIRVPAFAQ 177 (287)
T ss_dssp TTTEEETTEESCCT-TCEEEEEEEECCCT
T ss_pred HHHhcCcccccCCC-CCEEEEEEecCCCC
Confidence 48888887554222 36999999987653
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.58 E-value=6.3e-05 Score=73.55 Aligned_cols=154 Identities=18% Similarity=0.168 Sum_probs=95.0
Q ss_pred CccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCC-CcccCCCEEEEEccC---CCCeEEcCCCCEEEEcCCCcH
Q 038259 36 KPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGL-SYVSQVPFVVIDLLN---LSEINVDAVAKTAWVQAGATL 111 (501)
Q Consensus 36 ~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~-~~~~~~~~vvIdl~~---l~~i~~d~~~~~v~v~~G~~~ 111 (501)
.|.-++.|+|.+|+.++++.. +-+..+.+|||+.... ........++||+++ |+.|+.+ ++.++||+++++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~~---~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~~t~ 78 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTKL---GEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREE--GTDVVIGAMTTQ 78 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEE--TTEEEEETTCBH
T ss_pred CceEEECcCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCcH
Confidence 455689999999999988633 4468999999995321 111112368999986 5677663 457999999999
Q ss_pred HHHHH--HHHHhCCCceeccCCCC------cccccccccCCCCCCcccccccccccEe-------EEEEEecCCcEEecc
Q 038259 112 GQLYY--RIAEKSKNLGFPAGLCP------TVGAGGHISGGGYGVMLRKFGLAADNIV-------DAHLIDANGRFLDRE 176 (501)
Q Consensus 112 ~~l~~--~l~~~g~~l~~~~g~~~------~vgvgG~~~ggg~g~~~~~~G~~~d~v~-------~~~vV~~~G~v~~~~ 176 (501)
.+|.. .+.+.-..|.-...... ..+|||.+..+.. ..|.+. .+++..++|+-...
T Consensus 79 ~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~p---------~sD~~~~L~Al~A~v~l~~~~G~r~v~- 148 (288)
T 1n62_C 79 HALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGDP---------GNDMPALMQCLGAAYELTGPEGARIVA- 148 (288)
T ss_dssp HHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCCT---------TCSHHHHHHHHTCEEEEEETTEEEEEE-
T ss_pred HHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCCC---------chHHHHHHHHhCcEEEEEeCCccEEEE-
Confidence 99994 44443111211111111 2368899887631 244443 66778888842221
Q ss_pred CCCcchHHHhhccccCCceEEEEEEEEEEEe
Q 038259 177 SMGEDLFWAIRGGGIGASFGVIVAWKVRLVP 207 (501)
Q Consensus 177 ~~~~dl~~a~rg~~~~g~~Givt~~t~k~~p 207 (501)
- .|+|..++-..+ ..--|||++.|...+
T Consensus 149 ~--~df~~g~~~t~l-~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 149 A--RDYYQGAYFTAI-EPGELLTAIRIPVPP 176 (288)
T ss_dssp H--HHHEEETTEESC-CTTCEEEEEEEECCC
T ss_pred H--HHHhcCcccccC-CCCCEEEEEEeCCCC
Confidence 1 366665553221 223689999887654
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.26 E-value=0.00015 Score=75.43 Aligned_cols=151 Identities=17% Similarity=0.090 Sum_probs=99.1
Q ss_pred EEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCC--CcccCCCEEEEEccC---CCCeEEcCCCCEEEEcCCCcHHH
Q 038259 39 VIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGL--SYVSQVPFVVIDLLN---LSEINVDAVAKTAWVQAGATLGQ 113 (501)
Q Consensus 39 ~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~--~~~~~~~~vvIdl~~---l~~i~~d~~~~~v~v~~G~~~~~ 113 (501)
.++.|+|.+|+.++++.. . +..+.+||++.... .... ...++||+++ |+.|+.+ +..++|||++++.+
T Consensus 179 ~y~~P~sl~ea~~ll~~~---~-~a~ilaGGT~L~~~~k~~~~-~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl~~ 251 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAH---P-EATLIAGGTDVSLWVTKALR-DLPEVAFLSHCKDLAQIRET--PDGYGIGAGVTIAA 251 (462)
T ss_dssp CCBCCSSHHHHHHHHHHC---T-TCEEESSCTTTTHHHHTSCC-CCCSEEECTTCGGGSCEEEE--TTEEEEETTCBHHH
T ss_pred EEEecCCHHHHHHHHhhC---C-CCEEEeCCchhhhhhhccCC-CCCEEEEcCCChhhCcEEEc--CCEEEEccCCcHHH
Confidence 467899999999988752 2 57899999997642 1111 2368999988 6888775 34699999999999
Q ss_pred HHHHHHHhCC-Cc----eeccCCC--CcccccccccCCCCCCcccccccccccEe----EEEEEecCCcEEeccCCCcch
Q 038259 114 LYYRIAEKSK-NL----GFPAGLC--PTVGAGGHISGGGYGVMLRKFGLAADNIV----DAHLIDANGRFLDRESMGEDL 182 (501)
Q Consensus 114 l~~~l~~~g~-~l----~~~~g~~--~~vgvgG~~~ggg~g~~~~~~G~~~d~v~----~~~vV~~~G~v~~~~~~~~dl 182 (501)
|...+.+ .+ .| ....+.. ...+|||.+.++..+ +.....++ .+++..++|+ .+.. -.|+
T Consensus 252 l~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~------sD~~~~L~ALdA~v~l~~~~G~-R~vp--~~dF 321 (462)
T 2w3s_A 252 LRAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSPI------GDGPPALIAMGASLTLRRGQER-RRMP--LEDF 321 (462)
T ss_dssp HHHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT------CSHHHHHHHTTCEEEEEBTTBC-CCCB--GGGG
T ss_pred HHHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCCc------chHHHHHHHcCCEEEEEeCCce-EEEE--HHHh
Confidence 9987433 22 11 1122222 124588998876533 44455566 7888888884 2211 2477
Q ss_pred HHHhhccccCCceEEEEEEEEEEEe
Q 038259 183 FWAIRGGGIGASFGVIVAWKVRLVP 207 (501)
Q Consensus 183 ~~a~rg~~~~g~~Givt~~t~k~~p 207 (501)
|..+|-..+ ..-.|||++.|...+
T Consensus 322 ~~g~~~t~L-~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 322 FLEYRKQDR-RPGEFVESVTLPKSA 345 (462)
T ss_dssp EEETTEESC-CTTCEEEEEEEESCC
T ss_pred hcccccccC-CCCcEEEEEEEecCC
Confidence 777765431 122699999887654
No 32
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=94.40 E-value=0.061 Score=52.16 Aligned_cols=153 Identities=17% Similarity=0.071 Sum_probs=89.6
Q ss_pred CCccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCC-cccCCCEEEEEccC---CCCeEEcCCCCEEEEcCCCc
Q 038259 35 PKPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLS-YVSQVPFVVIDLLN---LSEINVDAVAKTAWVQAGAT 110 (501)
Q Consensus 35 ~~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~-~~~~~~~vvIdl~~---l~~i~~d~~~~~v~v~~G~~ 110 (501)
+.|.-++.|+|.+|+.++++. +-...+.+||++....- ........+||+++ |+.|+. +++.++||++++
T Consensus 3 ~~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt 76 (288)
T 1t3q_C 3 FPAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQ--SAGILSVGAMVT 76 (288)
T ss_dssp CCCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEE--ETTEEEEETTCB
T ss_pred CCCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEE--cCCEEEEcCCCc
Confidence 355678999999999998863 23468899999953210 01111358899998 456665 455799999999
Q ss_pred HHHHHH--HHHHhCCCceec---cCC---CCcccccccccCCCCCCcccccccccccEe-------EEEEEecCCcEEec
Q 038259 111 LGQLYY--RIAEKSKNLGFP---AGL---CPTVGAGGHISGGGYGVMLRKFGLAADNIV-------DAHLIDANGRFLDR 175 (501)
Q Consensus 111 ~~~l~~--~l~~~g~~l~~~---~g~---~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~-------~~~vV~~~G~v~~~ 175 (501)
+.+|.. .+.++-..|.-. .|+ -...++||.+..+-. ..|... .+++..++|+-...
T Consensus 77 ~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~p---------~sD~~~~L~Al~A~v~l~~~~g~R~vp 147 (288)
T 1t3q_C 77 HFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHADA---------GAEMPFLMATLGATMYIASSAGVRSVS 147 (288)
T ss_dssp HHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTCT---------TCHHHHHHHHTTCEEEEEETTEEEEEE
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCCC---------cHHHHHHHHHcCcEEEEEcCCceEEEE
Confidence 999986 344331111100 111 122367888864421 245544 67777888852221
Q ss_pred cCCCcchHHHhhccccCCceEEEEEEEEEEE
Q 038259 176 ESMGEDLFWAIRGGGIGASFGVIVAWKVRLV 206 (501)
Q Consensus 176 ~~~~~dl~~a~rg~~~~g~~Givt~~t~k~~ 206 (501)
- .|+|..++-.. -..--|||++.|...
T Consensus 148 ~---~dF~~g~~~t~-L~~~Eil~~I~iP~~ 174 (288)
T 1t3q_C 148 A---TDFMKGHYFTD-LEAGEVLVRVEIPIP 174 (288)
T ss_dssp H---HHHEEETTEES-CCTTCEEEEEEEECC
T ss_pred H---HHHhcCccccc-CCCCCEEEEEEecCC
Confidence 1 25544443211 012268999887543
No 33
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=94.20 E-value=0.038 Score=54.10 Aligned_cols=156 Identities=12% Similarity=0.064 Sum_probs=91.1
Q ss_pred CccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCC-cccCCCEEEEEccC---CCCeEEcCCCCEEEEcCCCcH
Q 038259 36 KPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLS-YVSQVPFVVIDLLN---LSEINVDAVAKTAWVQAGATL 111 (501)
Q Consensus 36 ~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~-~~~~~~~vvIdl~~---l~~i~~d~~~~~v~v~~G~~~ 111 (501)
.+..+++|+|.+|+.++++. +. ...+.+||++....- ........+||+++ |+.|+. ++..++|||++++
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt~ 82 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEH--GPEGISFGAACAL 82 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEE--CSSEEEEETTCBH
T ss_pred CCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEE--CCCeEEEccCCcH
Confidence 56778999999999887753 22 368899999964211 01111368999997 456665 4568999999999
Q ss_pred HHHHHHHHHh-------C---C-C----ceeccCC--CCcccccccccCCCCCCcccccccccccEe----EEEEEecCC
Q 038259 112 GQLYYRIAEK-------S---K-N----LGFPAGL--CPTVGAGGHISGGGYGVMLRKFGLAADNIV----DAHLIDANG 170 (501)
Q Consensus 112 ~~l~~~l~~~-------g---~-~----l~~~~g~--~~~vgvgG~~~ggg~g~~~~~~G~~~d~v~----~~~vV~~~G 170 (501)
.++.+.+.+. . . . +...++. -...+|||.+..+... +...--++ .+++..++|
T Consensus 83 ~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p~------sD~~~~L~AldA~v~l~~~~G 156 (305)
T 3nvz_B 83 SSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPI------SDLNPVFMASGTKLTIVSRGT 156 (305)
T ss_dssp HHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCTT------CSSHHHHHHHTCEEEEEETTE
T ss_pred HHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCCc------hHHHHHHHHcCCEEEEEcCCC
Confidence 9999876532 0 0 0 0011111 1234688888765431 21222222 567778888
Q ss_pred cEEeccCCCcchHHHhhccccCCceEEEEEEEEEEE
Q 038259 171 RFLDRESMGEDLFWAIRGGGIGASFGVIVAWKVRLV 206 (501)
Q Consensus 171 ~v~~~~~~~~dl~~a~rg~~~~g~~Givt~~t~k~~ 206 (501)
+-...-. .|+|-+++-.. -..--|||++.|...
T Consensus 157 ~R~vp~~--~df~~g~~~t~-l~~~Eil~~I~iP~~ 189 (305)
T 3nvz_B 157 RRTVPMD--HTFFPSYRKTL-LGPEEILLSIEIPYS 189 (305)
T ss_dssp EEEEECC--GGGCCSTTCCS-CCTTCEEEEEEEECC
T ss_pred cEEEEee--hHhhcCccccc-CCCCcEEEEEEecCC
Confidence 5222111 15555554322 112259999887543
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=93.52 E-value=0.072 Score=51.88 Aligned_cols=76 Identities=22% Similarity=0.218 Sum_probs=53.5
Q ss_pred CccEEEecCCHHHHHHHHHHHHHCCC-cEEEEcCCCCCCCC-CcccCCCEEEEEccCC---CCeEEcCCCCEEEEcCCCc
Q 038259 36 KPLVIITPLDVSQVQAAIKCSKKHGL-QIRLRSGGHDFEGL-SYVSQVPFVVIDLLNL---SEINVDAVAKTAWVQAGAT 110 (501)
Q Consensus 36 ~p~~vv~p~s~~~v~~~v~~a~~~~~-~~~v~ggGh~~~g~-~~~~~~~~vvIdl~~l---~~i~~d~~~~~v~v~~G~~ 110 (501)
+|--+++|+|.+|..++++ +++- ...+.+||++.... -........+||++++ +.|+. +++.++||++++
T Consensus 2 ~~f~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt 76 (296)
T 3hrd_C 2 KDFEFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRV--EENTIHIGALST 76 (296)
T ss_dssp CCCEEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEE--CSSEEEEETTCB
T ss_pred CceeEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEE--cCCeEEEccCCc
Confidence 3456889999999887764 3432 46888999996421 1111123688999985 55665 456899999999
Q ss_pred HHHHHH
Q 038259 111 LGQLYY 116 (501)
Q Consensus 111 ~~~l~~ 116 (501)
+.++..
T Consensus 77 ~~~l~~ 82 (296)
T 3hrd_C 77 FTQIEN 82 (296)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999974
No 35
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=89.50 E-value=0.3 Score=48.04 Aligned_cols=76 Identities=18% Similarity=0.149 Sum_probs=53.9
Q ss_pred CccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCC-CcccCCCEEEEEccCC---CCeEEcCCCCEEEEcCCCcH
Q 038259 36 KPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGL-SYVSQVPFVVIDLLNL---SEINVDAVAKTAWVQAGATL 111 (501)
Q Consensus 36 ~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~-~~~~~~~~vvIdl~~l---~~i~~d~~~~~v~v~~G~~~ 111 (501)
.|--++.|.|.+|..++++. -.-.+..||+++... -........+||++++ +.|+.+++ +.++||+++++
T Consensus 5 ~~f~y~~P~sl~ea~~ll~~-----~~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~~-~~l~IGA~vt~ 78 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALAA-----EATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLAD-GSLRIGAGATL 78 (324)
T ss_dssp CCCEEECCSSHHHHHHHTTS-----TTEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECTT-SCEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHhC-----CCCEEEECchhHHHHHhccCCCCCEEEECCCChhhcceEECCC-CeEEEccCCcH
Confidence 45568999999999888761 247889999986321 1111123689999876 66666433 36999999999
Q ss_pred HHHHHH
Q 038259 112 GQLYYR 117 (501)
Q Consensus 112 ~~l~~~ 117 (501)
.+|...
T Consensus 79 ~~l~~~ 84 (324)
T 1rm6_B 79 EAIAEH 84 (324)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 999864
No 36
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=88.11 E-value=0.98 Score=48.92 Aligned_cols=29 Identities=38% Similarity=0.578 Sum_probs=24.5
Q ss_pred hhhhhhhc-ccHHHHHHHHhhcCCCCCCcC
Q 038259 456 VWGSKYFK-NNFKRLVRVKSMVDPHNFFRN 484 (501)
Q Consensus 456 ~~~~~yyg-~n~~RL~~IK~kyDP~n~F~~ 484 (501)
.|...+|| ..++.|++||+.|||+|+|.-
T Consensus 625 ~~l~~~~g~~~l~lmr~IK~a~DP~gILNP 654 (658)
T 4bby_A 625 QWLKESISDVGFGMLKSVKDYVDPTNIFGN 654 (658)
T ss_dssp GGHHHHHCHHHHHHHHHHHHHHSTTCSSCS
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCCC
Confidence 56667776 579999999999999999963
No 37
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=76.14 E-value=1.9 Score=50.40 Aligned_cols=79 Identities=11% Similarity=0.089 Sum_probs=54.8
Q ss_pred CccEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCC-cccCCCEEEEEccCC---CCeEEcCCCCEEEEcCCCcH
Q 038259 36 KPLVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLS-YVSQVPFVVIDLLNL---SEINVDAVAKTAWVQAGATL 111 (501)
Q Consensus 36 ~p~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~-~~~~~~~vvIdl~~l---~~i~~d~~~~~v~v~~G~~~ 111 (501)
.+..+++|.|.+|+.++++. + -.-.+.+||++....- ........+||++++ +.|+.+ +..++|||++++
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~---~-~~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~--~~~l~IGA~vtl 305 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQ---H-PEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHG--PEGISFGAACAL 305 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHH---C-TTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEEC--SSEEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHhh---C-CCCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEe--CCEEEEEecChH
Confidence 44568999999999887653 2 1357889999853211 111112578999985 556654 557999999999
Q ss_pred HHHHHHHHH
Q 038259 112 GQLYYRIAE 120 (501)
Q Consensus 112 ~~l~~~l~~ 120 (501)
.+|.+.+.+
T Consensus 306 ~~l~~~l~~ 314 (1332)
T 3unc_A 306 SSVEKTLLE 314 (1332)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999887643
No 38
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=65.19 E-value=8.3 Score=40.91 Aligned_cols=29 Identities=17% Similarity=0.409 Sum_probs=18.8
Q ss_pred hhhhhhhc-ccHHHHHHHHhhcCCCCCCcC
Q 038259 456 VWGSKYFK-NNFKRLVRVKSMVDPHNFFRN 484 (501)
Q Consensus 456 ~~~~~yyg-~n~~RL~~IK~kyDP~n~F~~ 484 (501)
.|....+| ..++=+++||+.+||+|+|.-
T Consensus 551 ~~l~~~~g~~~~~lmr~iK~a~DP~gIlNP 580 (584)
T 2uuu_A 551 PWMTRYATRGWINVYRSLKETIDPKDICNP 580 (584)
T ss_dssp --------CTHHHHHHHHHHHHCTTCCBSC
T ss_pred HHHHHhcCHHHHHHHHHHHHHcCCCcCCCC
Confidence 34445555 578999999999999999964
No 39
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=49.73 E-value=7.3 Score=41.16 Aligned_cols=22 Identities=27% Similarity=0.489 Sum_probs=20.5
Q ss_pred ccHHHHHHHHhhcCCCCCCcCC
Q 038259 464 NNFKRLVRVKSMVDPHNFFRNE 485 (501)
Q Consensus 464 ~n~~RL~~IK~kyDP~n~F~~~ 485 (501)
.++++.+++++++||+++|.+.
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~ 554 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNG 554 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCHHHHHHHHHhcCCCCccCCH
Confidence 8999999999999999999864
No 40
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=49.63 E-value=9.1 Score=40.47 Aligned_cols=32 Identities=19% Similarity=0.227 Sum_probs=23.3
Q ss_pred cccHHHHHHHHhhcCCCCCCcCCCCCCC-ccccc
Q 038259 463 KNNFKRLVRVKSMVDPHNFFRNEQSIPP-LTSWR 495 (501)
Q Consensus 463 g~n~~RL~~IK~kyDP~n~F~~~~sI~~-~~~~~ 495 (501)
++... |++||+.+||+|+|.-..-++| ..-|.
T Consensus 536 ~~~~~-m~~iK~~~DP~~ilNPGk~~t~~~~~~~ 568 (571)
T 1f0x_A 536 KAPET-LQKFYRENDPTNSMNPGIGKTSKRKNWQ 568 (571)
T ss_dssp CCCHH-HHHHHHHHCTTCCBSTTTTTCCCSSCC-
T ss_pred CCHHH-HHHHHHHhCCCCCCCCCcCcCCcccccc
Confidence 33444 9999999999999987776665 34443
No 41
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=48.49 E-value=24 Score=37.02 Aligned_cols=26 Identities=19% Similarity=0.156 Sum_probs=21.4
Q ss_pred ccHHHHHHHHhhcCCCCCCcCCCCCC
Q 038259 464 NNFKRLVRVKSMVDPHNFFRNEQSIP 489 (501)
Q Consensus 464 ~n~~RL~~IK~kyDP~n~F~~~~sI~ 489 (501)
..++-+++||+.+||+|+|.-..-+.
T Consensus 523 ~~~~lm~~iK~~~DP~gILNPGk~~~ 548 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAPGKSGV 548 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCTTGGGC
T ss_pred HHHHHHHHHHHHcCccCCCCCCcccc
Confidence 46888999999999999998665443
No 42
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=46.50 E-value=28 Score=28.66 Aligned_cols=42 Identities=10% Similarity=0.180 Sum_probs=34.9
Q ss_pred cCCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcE-EEEcCCCC
Q 038259 28 RFSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQI-RLRSGGHD 71 (501)
Q Consensus 28 r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~-~v~ggGh~ 71 (501)
+|.. ...+..++.+.|++|+.++.+.|++.|+|. .|+-.|+.
T Consensus 42 ~W~~--~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 42 KWLD--EGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp HTGG--GCSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 5732 348999999999999999999999999996 56677765
No 43
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=41.87 E-value=43 Score=27.45 Aligned_cols=42 Identities=14% Similarity=0.141 Sum_probs=35.1
Q ss_pred cCCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcE-EEEcCCCC
Q 038259 28 RFSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQI-RLRSGGHD 71 (501)
Q Consensus 28 r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~-~v~ggGh~ 71 (501)
+|. ....|..|+++.+++++.++.+.|++.|+|. .++-.|+.
T Consensus 49 ~W~--~~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 91 (121)
T 1wn2_A 49 AWF--REGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLT 91 (121)
T ss_dssp HHH--HTTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTCT
T ss_pred HHH--HCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 464 3568999999999999999999999999996 56667764
No 44
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=40.38 E-value=46 Score=27.16 Aligned_cols=42 Identities=12% Similarity=0.268 Sum_probs=35.2
Q ss_pred cCCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcE-EEEcCCCC
Q 038259 28 RFSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQI-RLRSGGHD 71 (501)
Q Consensus 28 r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~-~v~ggGh~ 71 (501)
+|.. ...|..|+.+.+++|+.++.+.|++.|+|. .++=.|+.
T Consensus 48 ~W~~--~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 90 (120)
T 1xty_A 48 EWLH--QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGKT 90 (120)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 4643 468999999999999999999999999996 56667763
No 45
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=38.63 E-value=15 Score=38.56 Aligned_cols=23 Identities=17% Similarity=0.291 Sum_probs=21.1
Q ss_pred cccHHHHHHHHhhcCCCCCCcCC
Q 038259 463 KNNFKRLVRVKSMVDPHNFFRNE 485 (501)
Q Consensus 463 g~n~~RL~~IK~kyDP~n~F~~~ 485 (501)
|+++..-++++.++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 58999999999999999999864
No 46
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=37.88 E-value=45 Score=27.10 Aligned_cols=42 Identities=7% Similarity=0.206 Sum_probs=35.0
Q ss_pred cCCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcE-EEEcCCCC
Q 038259 28 RFSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQI-RLRSGGHD 71 (501)
Q Consensus 28 r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~-~v~ggGh~ 71 (501)
+|. ....|..|+.+.+++++.++.+.|++.|+|. .++-.|+.
T Consensus 45 ~W~--~~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 45 EWY--DEGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp HHH--HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred HHH--HCCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 464 3569999999999999999999999999996 56666664
No 47
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=37.34 E-value=44 Score=27.10 Aligned_cols=41 Identities=15% Similarity=0.270 Sum_probs=33.3
Q ss_pred cCCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcE-EEEcCCC
Q 038259 28 RFSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQI-RLRSGGH 70 (501)
Q Consensus 28 r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~-~v~ggGh 70 (501)
+|. ....|..|+.+.+++|+.++.+.|++.|+|. .++-.|+
T Consensus 43 ~W~--~~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 84 (115)
T 2zv3_A 43 EWL--REGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGH 84 (115)
T ss_dssp HHH--HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC-
T ss_pred HHH--HCCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 464 3568999999999999999999999999986 5555555
No 48
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=31.71 E-value=75 Score=25.73 Aligned_cols=41 Identities=20% Similarity=0.377 Sum_probs=33.6
Q ss_pred cCCCCCCCCccEEEecCCHHHHHHHHHHHHHCCCcE-EEEcCCC
Q 038259 28 RFSTPNTPKPLVIITPLDVSQVQAAIKCSKKHGLQI-RLRSGGH 70 (501)
Q Consensus 28 r~~~~~~~~p~~vv~p~s~~~v~~~v~~a~~~~~~~-~v~ggGh 70 (501)
+|.. ...|..+++..+++++.++.+.|.+.|+|. .++=.|+
T Consensus 45 ~W~~--~g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 45 QWEY--CGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred HHHh--CCCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 4643 446999999999999999999999999985 5555665
No 49
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=30.54 E-value=43 Score=25.75 Aligned_cols=34 Identities=21% Similarity=0.146 Sum_probs=27.4
Q ss_pred cEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcccCCCEEEEEccCCCC
Q 038259 38 LVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYVSQVPFVVIDLLNLSE 93 (501)
Q Consensus 38 ~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~~~vvIdl~~l~~ 93 (501)
-.++.|++-+|.++++...++.. .|+|+|+.|+.
T Consensus 7 Ivv~~P~sy~Da~~I~d~Lr~~~----------------------~VvvNL~~ld~ 40 (87)
T 3p04_A 7 IVPVELHSFEDAQVIGGAFRDGD----------------------AVVFDMSLLSR 40 (87)
T ss_dssp CEEEECSSGGGHHHHHHHHHTTC----------------------CEEEECTTSCH
T ss_pred EEEEecCcHHHHHHHHHHHHCCC----------------------EEEEECCCCCH
Confidence 57899999999999999887632 57788887764
No 50
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=29.68 E-value=25 Score=41.08 Aligned_cols=77 Identities=16% Similarity=0.094 Sum_probs=48.4
Q ss_pred EEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCC--CCcccCCCEEEEEccCCCCe-EEcCCCCEEEEcCCCcHHHHH
Q 038259 39 VIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEG--LSYVSQVPFVVIDLLNLSEI-NVDAVAKTAWVQAGATLGQLY 115 (501)
Q Consensus 39 ~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g--~~~~~~~~~vvIdl~~l~~i-~~d~~~~~v~v~~G~~~~~l~ 115 (501)
..+.|.|.+|+.++.. ++. .-.+..|++...- ..... .-.++|++.+.... .+..+...++|||+|++.++.
T Consensus 242 ~w~~P~tl~el~~l~~---~~p-~a~lvaGnT~~gl~~~~~~~-~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~~ 316 (1335)
T 3zyv_A 242 TWIAPGTLNDLLELKM---KHP-SAPLVIGNTYLGLHMKFTDV-SYPIIISPARILELFVVTNTKQGLTLGTGLSLTQVK 316 (1335)
T ss_dssp EEEECSSHHHHHHHHH---HCT-TSCBCSSCTTHHHHHC--CC-CCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHHH
T ss_pred eEecCCCHHHHHHHHH---HCC-CCeEEEecccceeeEeecCC-CCCeEEEcCcchhHheEEecCCEEEEcccCcHHHHH
Confidence 4789999999988754 231 1234556665311 11101 12588998764443 344456679999999999998
Q ss_pred HHHHH
Q 038259 116 YRIAE 120 (501)
Q Consensus 116 ~~l~~ 120 (501)
+.|.+
T Consensus 317 ~~l~~ 321 (1335)
T 3zyv_A 317 NVLSD 321 (1335)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87765
No 51
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=24.42 E-value=1.2e+02 Score=25.87 Aligned_cols=41 Identities=20% Similarity=0.314 Sum_probs=33.6
Q ss_pred cEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCcc
Q 038259 38 LVIITPLDVSQVQAAIKCSKKHGLQIRLRSGGHDFEGLSYV 78 (501)
Q Consensus 38 ~~vv~p~s~~~v~~~v~~a~~~~~~~~v~ggGh~~~g~~~~ 78 (501)
...+.|.+.+++.++|+.+.+.+.-+.+..||.+....+..
T Consensus 47 ~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~~~D~t 87 (167)
T 2g2c_A 47 SEVVVPEGYDTVVEAIATALKQGARFIITAGGTGIRAKNQT 87 (167)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCSSSTTCCH
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcCh
Confidence 45688999999999999998866789999999987654443
No 52
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=21.75 E-value=1.5e+02 Score=25.46 Aligned_cols=40 Identities=15% Similarity=0.119 Sum_probs=32.8
Q ss_pred cEEEecCCHHHHHHHHHHHHHC-CCcEEEEcCCCCCCCCCc
Q 038259 38 LVIITPLDVSQVQAAIKCSKKH-GLQIRLRSGGHDFEGLSY 77 (501)
Q Consensus 38 ~~vv~p~s~~~v~~~v~~a~~~-~~~~~v~ggGh~~~g~~~ 77 (501)
...+.|.+.+++.++|+.+.+. +.-+.+..||.+....+.
T Consensus 46 ~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~~~D~ 86 (172)
T 1mkz_A 46 DKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQ 86 (172)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSSTTCC
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCCC
Confidence 3568899999999999999886 578999999998655443
No 53
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=20.70 E-value=83 Score=30.60 Aligned_cols=31 Identities=13% Similarity=0.303 Sum_probs=26.9
Q ss_pred cEEEecCCHHHHHHHHHHHHHCCCcEEEEcC
Q 038259 38 LVIITPLDVSQVQAAIKCSKKHGLQIRLRSG 68 (501)
Q Consensus 38 ~~vv~p~s~~~v~~~v~~a~~~~~~~~v~gg 68 (501)
..|+.|.+.+|...+++.|-+.+.|+.+|-.
T Consensus 154 l~V~~Psd~~e~~~~l~~a~~~~~Pv~i~~~ 184 (341)
T 2ozl_B 154 LKVVSPWNSEDAKGLIKSAIRDNNPVVVLEN 184 (341)
T ss_dssp CEEECCCSHHHHHHHHHHHHHSSSCEEEEEC
T ss_pred CEEEEeCCHHHHHHHHHHHHhcCCCEEEEEC
Confidence 4689999999999999999988778877754
No 54
>2kxh_B Peptide of FAR upstream element-binding protein 1; RRM, FIR, FBP, protein-protein complex, protein binding; NMR {Homo sapiens}
Probab=20.20 E-value=57 Score=19.64 Aligned_cols=20 Identities=15% Similarity=0.343 Sum_probs=16.7
Q ss_pred hhcccHHHHHHHHhhcCCCC
Q 038259 461 YFKNNFKRLVRVKSMVDPHN 480 (501)
Q Consensus 461 yyg~n~~RL~~IK~kyDP~n 480 (501)
-|.+-++|-|+|.+|.+++.
T Consensus 9 aFadA~~RaRQIaAKig~~~ 28 (31)
T 2kxh_B 9 AFKDALQRARQIAAKIGGDA 28 (31)
T ss_dssp HHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHhcCCC
Confidence 35688999999999998764
Done!