Query 038267
Match_columns 295
No_of_seqs 239 out of 2103
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 15:49:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038267.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038267hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hqi_A Speckle-type POZ protei 100.0 5.9E-52 2E-56 363.8 28.0 279 6-294 2-308 (312)
2 3htm_A Speckle-type POZ protei 100.0 7.4E-32 2.5E-36 216.0 15.1 153 140-294 14-168 (172)
3 3hve_A Gigaxonin; ubiquitin, c 100.0 1.3E-29 4.5E-34 215.7 13.3 152 141-294 12-167 (256)
4 4eoz_A Speckle-type POZ protei 100.0 2E-30 6.8E-35 201.8 6.6 139 141-281 6-145 (145)
5 3i3n_A Kelch-like protein 11; 100.0 2.6E-29 8.9E-34 216.5 10.6 152 141-294 13-175 (279)
6 2if5_A Zinc finger and BTB dom 99.9 2.4E-26 8.4E-31 172.8 10.3 112 142-255 7-119 (120)
7 1r29_A B-cell lymphoma 6 prote 99.9 8.7E-26 3E-30 171.5 11.1 115 141-258 10-126 (127)
8 2z8h_A Transcription regulator 99.9 2.2E-25 7.5E-30 171.7 10.8 119 141-263 17-137 (138)
9 2ppi_A Gigaxonin; BTB domain, 99.9 6E-26 2.1E-30 175.9 7.1 114 141-256 28-144 (144)
10 3b84_A Zinc finger and BTB dom 99.9 1.1E-25 3.8E-30 168.9 7.9 111 142-258 6-117 (119)
11 1buo_A POZ domain, protein (pr 99.9 5.5E-25 1.9E-29 165.6 10.7 110 142-258 10-120 (121)
12 2yy9_A Zinc finger and BTB dom 99.9 1.6E-25 5.6E-30 171.7 7.4 115 141-261 6-121 (135)
13 2vpk_A Myoneurin; transcriptio 99.9 4.9E-25 1.7E-29 164.7 9.6 109 142-256 4-115 (116)
14 2vkp_A BTB/POZ domain-containi 99.9 5E-25 1.7E-29 162.8 9.1 103 154-259 2-109 (109)
15 3ohu_A Transcription regulator 99.9 7.8E-26 2.7E-30 171.3 2.1 111 141-255 13-125 (125)
16 2ihc_A Transcription regulator 99.9 1.5E-25 5E-30 169.5 2.2 112 141-256 10-123 (124)
17 3ga1_A Nucleus accumbens-assoc 99.9 6.3E-25 2.2E-29 167.2 3.8 111 142-258 15-127 (129)
18 2q81_A MIZ-1 protein; BTB/POZ 99.9 2.1E-24 7.3E-29 161.8 6.5 108 142-256 9-117 (119)
19 3fkc_A Transcriptional regulat 99.9 1.9E-22 6.6E-27 150.3 11.1 104 141-249 12-115 (116)
20 3m5b_A Zinc finger and BTB dom 99.9 2.9E-23 1E-27 155.3 6.5 103 142-257 14-117 (119)
21 3ivv_A Speckle-type POZ protei 99.8 6.9E-20 2.4E-24 142.0 10.4 114 6-120 6-144 (145)
22 2foj_A Ubiquitin carboxyl-term 99.8 2.1E-18 7.2E-23 135.2 12.5 111 8-118 16-147 (155)
23 4gjh_A TNF receptor-associated 99.8 3.3E-18 1.1E-22 136.9 9.7 112 6-117 19-171 (178)
24 4ghu_A TNF receptor-associated 99.7 4E-18 1.4E-22 138.3 8.2 112 7-118 36-186 (198)
25 1lb6_A TNF receptor-associated 99.7 1.5E-17 5.1E-22 131.0 10.2 111 9-119 3-156 (160)
26 2gkw_A TNF receptor-associated 99.7 1E-17 3.5E-22 135.6 6.4 111 8-118 37-186 (192)
27 1ca9_A TRAF2, protein (TNF rec 99.7 4.9E-17 1.7E-21 131.8 8.5 111 8-118 40-189 (192)
28 1d00_A Tumor necrosis factor r 99.7 8.1E-17 2.8E-21 127.8 9.0 111 8-118 16-165 (168)
29 1flk_A TNF receptor associated 99.7 3.7E-17 1.3E-21 135.8 5.7 111 8-118 73-222 (228)
30 2f1z_A Ubiquitin carboxyl-term 99.6 5.7E-15 2E-19 137.5 11.4 111 8-118 28-159 (522)
31 2ast_A S-phase kinase-associat 99.5 8.2E-14 2.8E-18 109.1 10.2 115 163-278 3-148 (159)
32 4ajy_C Transcription elongatio 99.3 5.9E-12 2E-16 90.0 7.3 79 163-244 4-97 (97)
33 1fs1_B SKP1, cyclin A/CDK2-ass 99.2 1.1E-10 3.7E-15 89.2 9.7 99 163-266 4-128 (141)
34 2p1m_A SKP1-like protein 1A; F 99.1 2.2E-11 7.4E-16 95.2 1.0 110 163-276 6-145 (160)
35 1hv2_A Elongin C, ELC1; protei 98.6 6.9E-08 2.4E-12 68.8 6.9 81 162-244 5-99 (99)
36 2fnj_C Transcription elongatio 98.6 6.2E-08 2.1E-12 68.6 4.7 79 163-244 3-96 (96)
37 3v7d_A Suppressor of kinetocho 98.5 5.4E-07 1.8E-11 70.7 9.5 108 162-270 8-147 (169)
38 3drz_A BTB/POZ domain-containi 98.5 8.4E-07 2.9E-11 64.1 8.6 94 162-257 7-106 (107)
39 1vcb_B Protein (elongin C); tu 98.1 2.6E-06 9E-11 61.9 5.3 82 162-244 18-112 (112)
40 4gwm_A Meprin A subunit beta; 97.6 0.00038 1.3E-08 64.8 10.4 69 11-79 406-485 (592)
41 3drx_A BTB/POZ domain-containi 97.5 0.00021 7.4E-09 56.9 7.0 95 162-258 13-113 (202)
42 2eqx_A Kelch repeat and BTB do 96.9 0.00063 2.2E-08 48.6 3.2 39 256-294 5-44 (105)
43 3kvt_A Potassium channel prote 95.8 0.0019 6.5E-08 46.9 0.4 95 162-258 6-105 (115)
44 1s1g_A Potassium voltage-gated 95.0 0.022 7.7E-07 41.7 4.0 90 161-255 13-109 (124)
45 1nn7_A Potassium channel KV4.2 94.3 0.016 5.4E-07 41.2 1.7 80 163-247 2-86 (105)
46 1t1d_A Protein (potassium chan 94.3 0.019 6.6E-07 40.3 2.1 84 163-248 3-90 (100)
47 2nz0_B Potassium voltage-gated 93.8 0.044 1.5E-06 41.0 3.3 83 160-247 34-121 (140)
48 2vkp_A BTB/POZ domain-containi 89.5 0.47 1.6E-05 33.2 4.6 31 259-289 77-107 (109)
49 2vpk_A Myoneurin; transcriptio 86.1 1.9 6.5E-05 30.4 6.2 31 259-289 86-116 (116)
50 2q81_A MIZ-1 protein; BTB/POZ 84.3 1.2 4E-05 31.9 4.2 30 259-288 88-117 (119)
51 1r29_A B-cell lymphoma 6 prote 84.2 3 0.0001 29.9 6.6 31 259-289 95-125 (127)
52 1buo_A POZ domain, protein (pr 83.9 3.4 0.00012 29.4 6.7 31 259-289 89-119 (121)
53 3b84_A Zinc finger and BTB dom 82.1 0.86 3E-05 32.6 2.8 31 259-289 86-116 (119)
54 2if5_A Zinc finger and BTB dom 82.0 1.8 6.3E-05 30.7 4.5 29 259-287 91-119 (120)
55 2eqx_A Kelch repeat and BTB do 81.0 1.3 4.3E-05 31.1 3.2 29 230-258 11-39 (105)
56 2yy9_A Zinc finger and BTB dom 80.6 2.2 7.5E-05 31.2 4.6 31 259-289 87-117 (135)
57 2z8h_A Transcription regulator 78.9 0.94 3.2E-05 33.4 2.1 31 259-289 101-131 (138)
58 3htm_A Speckle-type POZ protei 77.2 4.8 0.00016 30.4 5.8 31 230-260 135-165 (172)
59 2ppi_A Gigaxonin; BTB domain, 75.6 1.6 5.4E-05 32.5 2.5 29 259-287 115-143 (144)
60 3m5b_A Zinc finger and BTB dom 71.2 3.3 0.00011 29.6 3.3 31 259-289 87-117 (119)
61 2r9r_B Paddle chimera voltage 69.3 4.1 0.00014 37.3 4.2 85 162-248 53-141 (514)
62 3hqi_A Speckle-type POZ protei 68.4 11 0.00038 31.6 6.5 31 230-260 275-305 (312)
63 2plx_B Peptide inhibitor; heli 67.5 4.5 0.00016 19.5 2.1 22 266-287 3-24 (26)
64 3ga1_A Nucleus accumbens-assoc 66.2 0.99 3.4E-05 32.8 -0.5 32 258-289 95-126 (129)
65 4eoz_A Speckle-type POZ protei 64.2 3.7 0.00013 30.0 2.4 31 259-289 91-121 (145)
66 3hve_A Gigaxonin; ubiquitin, c 54.2 12 0.00041 30.4 4.1 31 259-289 99-129 (256)
67 3i3n_A Kelch-like protein 11; 49.7 13 0.00044 30.7 3.5 31 259-289 107-137 (279)
68 3v0r_A Major allergen ALT A 1; 49.0 5.3 0.00018 28.9 0.9 30 4-33 5-38 (133)
69 2ihc_A Transcription regulator 47.0 1 3.6E-05 32.4 -3.2 30 259-288 94-123 (124)
70 2ast_A S-phase kinase-associat 42.6 44 0.0015 24.9 5.3 38 250-289 87-124 (159)
71 2cmy_B Beta trypsin, veronica 39.7 11 0.00039 19.3 1.0 23 266-288 8-30 (34)
72 1fs1_B SKP1, cyclin A/CDK2-ass 33.2 1.4E+02 0.0047 21.6 7.1 79 209-289 24-119 (141)
73 1jya_A YOPE regulator; specifi 29.7 66 0.0022 23.2 4.0 27 30-58 28-54 (130)
74 2p1m_A SKP1-like protein 1A; F 21.4 68 0.0023 23.9 3.1 31 259-289 93-123 (160)
No 1
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=100.00 E-value=5.9e-52 Score=363.82 Aligned_cols=279 Identities=22% Similarity=0.315 Sum_probs=223.2
Q ss_pred cceeeeeEEEEEeecCC-----CCccccCCceecce---eeEEEEEeCCe-----eEEEEeecCCCCCCCCCceEEEEEE
Q 038267 6 VETISRLAQWRIDNFGP-----CSYKKSDPFKIGIW---NWHLSVEKNRY-----LYVRLFPEPSRLSKEQPPFARFIIR 72 (295)
Q Consensus 6 ~~~~~~~~~w~I~~~~~-----~~~~~S~~F~~gg~---~W~l~~yp~g~-----~~vsl~l~~~~~~~~~~v~a~f~~~ 72 (295)
.++.+|+|+|+|+||+. |+++.||+|.+||+ +|+|++||+|. +++|+||.+.+ ..+|.+.|+|+++
T Consensus 2 s~~~~~~~~w~I~nfs~~~~~~~~~i~S~~F~~gg~~~~~W~i~~yP~G~~~~~~~~lslyL~~~~-~~~~~v~a~~~~~ 80 (312)
T 3hqi_A 2 SKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVS-CPKSEVRAKFKFS 80 (312)
T ss_dssp EEEEEEEEEEEETTGGGCCCCTTCCEECCCBCC--CCCCEEEEEEETTCCC--CTTEEEEEEEEEE-CCC-CEEEEEEEE
T ss_pred CceEEEEEEEEEcCcchhhhcCCCeEeeCCcccCCCCCceEEEEEECCCCCccCCCcEEEEEEEcC-CCCCcEEEEEEEE
Confidence 35678999999999962 67899999999996 99999999983 48899887754 3479999999999
Q ss_pred EEeCCCCCeeeeeeccceecccCCceeee-e-----------eeeeeceeEEEeeeeeeeee-cCCCCccCCCCCCCCCc
Q 038267 73 VSNGGANRRLYISQVNERLLRTCEDFVWY-V-----------DCTIHGRFIVDVEFLELKIY-PLNGGDASSVWPSDGMM 139 (295)
Q Consensus 73 l~~~~~~~~~~~~~~~~~~~~~~~~~~w~-~-----------~~~~~~~l~ve~~v~~~~~~-~~~~~~~~~~~~~~~~~ 139 (295)
|+|++|+..........+.|....+|||. + +|++||+++|+|+|.+++-. .+.+.+ ....
T Consensus 81 l~~~~~~~~~~~~~~~~~~F~~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~i~~~v~v~~~~~~~~~~~-------~~~~ 153 (312)
T 3hqi_A 81 ILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRGFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQN-------TMNM 153 (312)
T ss_dssp EECTTSCEEEEEECSSCEEECTTCEEEEEEEEEHHHHTCGGGCCCGGGCEEEEEEEEEEEECCCEECCC-------CCSS
T ss_pred EEeCCCCcccccccCCceeCCCCCCcCHHHhccHHHhhccccCeecCCEEEEEEEEEEEeccccccccc-------cccc
Confidence 99999876554332222334434454443 1 37889999999998776432 112211 1122
Q ss_pred ccCChHHHHHHHHHHhhcCCcccEEEEeCCeEEEeEeeeeccCCHHHHHhhcCccCcCccceEEECCCCHHHHHHHHHHH
Q 038267 140 QSVSAQSTLRCLARMLDEGILADTVIHTADGTLKAHKAVLSASSPVFQSMFHHDLKEKESSTIYIEDMSVESCMALLSYL 219 (295)
Q Consensus 140 ~~~~~~~~~~~~~~l~~~~~~~Dv~l~v~~~~~~~hk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~l 219 (295)
..+|++.+.+++..+++++.++||+|.++|++|+|||.|||++||||++||.+++.|+...+|.|+++++++|+.+|+|+
T Consensus 154 ~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~i 233 (312)
T 3hqi_A 154 VKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFI 233 (312)
T ss_dssp CCCCCCCHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHH
T ss_pred cCCCCchHHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhh
Confidence 35677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCC-CcccccHHHHHHHHHHHhhcChHHHHHHHHHHHHhcCChhhHHHHHHHHHHcCcHHHHHHHHHHHHh-hcccc
Q 038267 220 YGT-IKQEDFWKHRLALLGAANKYDIADLKDACEESLLEDINSGNVLERLQEAWLYQLSKLKKGCLTYLFD-FGKIY 294 (295)
Q Consensus 220 Y~~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~~~~~~l~~A~~~~~~~L~~~~~~~i~~-~~~i~ 294 (295)
||+ ..... +++.+||.+|++|+++.|+..|+++|.+.++.+|+..++.+|.+|++..|++.|++||.+ +.+|.
T Consensus 234 Yt~~~~~~~--~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~ 308 (312)
T 3hqi_A 234 YTGKAPNLD--KMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVL 308 (312)
T ss_dssp HHSCCTTHH--HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC----
T ss_pred cCCCCCChH--HHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Confidence 975 44444 889999999999999999999999999999999999999999999999999999999999 77765
No 2
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.98 E-value=7.4e-32 Score=215.99 Aligned_cols=153 Identities=27% Similarity=0.416 Sum_probs=140.8
Q ss_pred ccCChHHHHHHHHHHhhcCCcccEEEEeCCeEEEeEeeeeccCCHHHHHhhcCccCcCccceEEECCCCHHHHHHHHHHH
Q 038267 140 QSVSAQSTLRCLARMLDEGILADTVIHTADGTLKAHKAVLSASSPVFQSMFHHDLKEKESSTIYIEDMSVESCMALLSYL 219 (295)
Q Consensus 140 ~~~~~~~~~~~~~~l~~~~~~~Dv~l~v~~~~~~~hk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~l 219 (295)
.+.|++.+.+++..+++++.+|||+|.++|++|+|||.||+++|+||++||.+++.|+...+|.++++++++|+.+|+|+
T Consensus 14 ~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~~ 93 (172)
T 3htm_A 14 VKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFI 93 (172)
T ss_dssp SCCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHHHH
Confidence 35677789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCC-CcccccHHHHHHHHHHHhhcChHHHHHHHHHHHHhcCChhhHHHHHHHHHHcCcHHHHHHHHHHHHh-hcccc
Q 038267 220 YGT-IKQEDFWKHRLALLGAANKYDIADLKDACEESLLEDINSGNVLERLQEAWLYQLSKLKKGCLTYLFD-FGKIY 294 (295)
Q Consensus 220 Y~~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~~~~~~l~~A~~~~~~~L~~~~~~~i~~-~~~i~ 294 (295)
|++ ...+. +++.+++.+|++|+++.|+..|+++|.+.++.+|++.++.+|.+|++..|++.|++||.+ |.+|.
T Consensus 94 Yt~~~~~~~--~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~~v~ 168 (172)
T 3htm_A 94 YTGKAPNLD--KMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVL 168 (172)
T ss_dssp HHSCCTTGG--GTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC----
T ss_pred hCCCCCCcH--HHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 965 44444 789999999999999999999999999999999999999999999999999999999999 87764
No 3
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.96 E-value=1.3e-29 Score=215.68 Aligned_cols=152 Identities=22% Similarity=0.300 Sum_probs=132.0
Q ss_pred cCChHHHHHHHHHHhhcCCcccEEEEeCCeEEEeEeeeeccCCHHHHHhhcCccC--cCccceEEECCCCHHHHHHHHHH
Q 038267 141 SVSAQSTLRCLARMLDEGILADTVIHTADGTLKAHKAVLSASSPVFQSMFHHDLK--EKESSTIYIEDMSVESCMALLSY 218 (295)
Q Consensus 141 ~~~~~~~~~~~~~l~~~~~~~Dv~l~v~~~~~~~hk~iLa~~S~~F~~~f~~~~~--e~~~~~i~l~~~~~~~f~~~L~~ 218 (295)
+.|+..+++.+..+++++.+|||+|.++|++|+|||.||+++||||++||.+++. |+...+|.++++++++|+.+|+|
T Consensus 12 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~ 91 (256)
T 3hve_A 12 PQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDY 91 (256)
T ss_dssp TTTHHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhh
Confidence 4578899999999999999999999999999999999999999999999999887 67788999999999999999999
Q ss_pred HhCC-CcccccHHHHHHHHHHHhhcChHHHHHHHHHHHHhcCChhhHHHHHHHHHHcCcHHHHHHHHHHHHh-hcccc
Q 038267 219 LYGT-IKQEDFWKHRLALLGAANKYDIADLKDACEESLLEDINSGNVLERLQEAWLYQLSKLKKGCLTYLFD-FGKIY 294 (295)
Q Consensus 219 lY~~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~~~~~~l~~A~~~~~~~L~~~~~~~i~~-~~~i~ 294 (295)
+||+ +.++. +++.+++.+|++|+++.|+..|+++|.+.++.+|++.++.+|..|++..|.+.|.+||.+ |.++.
T Consensus 92 ~Yt~~~~i~~--~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~ 167 (256)
T 3hve_A 92 IFSGQIRLNE--DTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLETHFRDVS 167 (256)
T ss_dssp HHHSCCCCC---CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCcccH--hHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHh
Confidence 9974 55554 689999999999999999999999999999999999999999999999999999999998 77653
No 4
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.96 E-value=2e-30 Score=201.85 Aligned_cols=139 Identities=30% Similarity=0.452 Sum_probs=104.6
Q ss_pred cCChHHHHHHHHHHhhcCCcccEEEEeCCeEEEeEeeeeccCCHHHHHhhcCccCcCccceEEECCCCHHHHHHHHHHHh
Q 038267 141 SVSAQSTLRCLARMLDEGILADTVIHTADGTLKAHKAVLSASSPVFQSMFHHDLKEKESSTIYIEDMSVESCMALLSYLY 220 (295)
Q Consensus 141 ~~~~~~~~~~~~~l~~~~~~~Dv~l~v~~~~~~~hk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~lY 220 (295)
+.|++.+.+++..+++++.+|||+|.++|++|+|||.||+++|+||++||.+++.|+...+|.+++++++.|+.+|+|+|
T Consensus 6 ~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y 85 (145)
T 4eoz_A 6 KVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIY 85 (145)
T ss_dssp CCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhc
Confidence 46677899999999999999999999999999999999999999999999999999988999999999999999999999
Q ss_pred CC-CcccccHHHHHHHHHHHhhcChHHHHHHHHHHHHhcCChhhHHHHHHHHHHcCcHHHHH
Q 038267 221 GT-IKQEDFWKHRLALLGAANKYDIADLKDACEESLLEDINSGNVLERLQEAWLYQLSKLKK 281 (295)
Q Consensus 221 ~~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~~~~~~l~~A~~~~~~~L~~ 281 (295)
++ ...+. +++.+++.+|++|+++.|+..|+++|.+.++.+|++.++.+|.+|++.+|++
T Consensus 86 ~~~~~~~~--~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 86 TGKAPNLD--KMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp HSCCTTGG--GTHHHHHHHHHHTTCHHHHHHHHCC---------------------------
T ss_pred cCccCCcH--HHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhcC
Confidence 75 44444 7899999999999999999999999999999999999999999999999874
No 5
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.96 E-value=2.6e-29 Score=216.46 Aligned_cols=152 Identities=20% Similarity=0.326 Sum_probs=133.7
Q ss_pred cCChHHHHHHHHHHhhcCCcccEEEEeC---CeEEEeEeeeeccCCHHHHHhhcCccCcCccceEEEC------CCCHHH
Q 038267 141 SVSAQSTLRCLARMLDEGILADTVIHTA---DGTLKAHKAVLSASSPVFQSMFHHDLKEKESSTIYIE------DMSVES 211 (295)
Q Consensus 141 ~~~~~~~~~~~~~l~~~~~~~Dv~l~v~---~~~~~~hk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~------~~~~~~ 211 (295)
+.|++.+++.+..++.++.+|||+|.++ |++|+|||.||+++|+||++||.+++.|+.+.+|.|+ ++++++
T Consensus 13 ~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~ 92 (279)
T 3i3n_A 13 SSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDT 92 (279)
T ss_dssp TTHHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHHH
T ss_pred HhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHH
Confidence 3567899999999999999999999998 8999999999999999999999999999999999998 899999
Q ss_pred HHHHHHHHhCC-CcccccHHHHHHHHHHHhhcChHHHHHHHHHHHHhcCChhhHHHHHHHHHHcCcHHHHHHHHHHHHh-
Q 038267 212 CMALLSYLYGT-IKQEDFWKHRLALLGAANKYDIADLKDACEESLLEDINSGNVLERLQEAWLYQLSKLKKGCLTYLFD- 289 (295)
Q Consensus 212 f~~~L~~lY~~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~~~~~~l~~A~~~~~~~L~~~~~~~i~~- 289 (295)
|+.+|+|+||+ +.++. +++.+++.+|++|+++.|+..|+++|.+.++.+|++.++.+|..|++..|.+.|.+||.+
T Consensus 93 f~~ll~~~Ytg~~~i~~--~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~ 170 (279)
T 3i3n_A 93 VEAVIEYMYTGRIRVST--GSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIRRN 170 (279)
T ss_dssp HHHHHHHHHHSEEEEET--TTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHhhCcCCcccCH--HHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 99999999975 44444 689999999999999999999999999999999999999999999999999999999998
Q ss_pred hcccc
Q 038267 290 FGKIY 294 (295)
Q Consensus 290 ~~~i~ 294 (295)
|.++.
T Consensus 171 f~~v~ 175 (279)
T 3i3n_A 171 FHKVI 175 (279)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 77653
No 6
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.93 E-value=2.4e-26 Score=172.83 Aligned_cols=112 Identities=23% Similarity=0.368 Sum_probs=100.3
Q ss_pred CChHHHHHHHHHHhhcCCcccEEEEeCCeEEEeEeeeeccCCHHHHHhhcCccCcCccceEEECCCCHHHHHHHHHHHhC
Q 038267 142 VSAQSTLRCLARMLDEGILADTVIHTADGTLKAHKAVLSASSPVFQSMFHHDLKEKESSTIYIEDMSVESCMALLSYLYG 221 (295)
Q Consensus 142 ~~~~~~~~~~~~l~~~~~~~Dv~l~v~~~~~~~hk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~lY~ 221 (295)
.|++.+.+.+.++++++.+|||+|.++|++|+|||.||+++||||++||.+++.|+...+|.++++++++|+.+|+|+||
T Consensus 7 ~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~Yt 86 (120)
T 2if5_A 7 DHSSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFAYT 86 (120)
T ss_dssp THHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHHcC
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred C-CcccccHHHHHHHHHHHhhcChHHHHHHHHHHH
Q 038267 222 T-IKQEDFWKHRLALLGAANKYDIADLKDACEESL 255 (295)
Q Consensus 222 ~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l 255 (295)
+ ...+. +++.+++.+|++|+++.|++.|+++|
T Consensus 87 ~~~~~~~--~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 87 ATLTVST--ANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp SCCCCCG--GGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCccCH--HHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 5 44444 78999999999999999999999987
No 7
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.93 E-value=8.7e-26 Score=171.53 Aligned_cols=115 Identities=27% Similarity=0.442 Sum_probs=106.1
Q ss_pred cCChHHHHHHHHHHhhcCCcccEEEEeCCeEEEeEeeeeccCCHHHHHhhcCccCcCccceEEE-CCCCHHHHHHHHHHH
Q 038267 141 SVSAQSTLRCLARMLDEGILADTVIHTADGTLKAHKAVLSASSPVFQSMFHHDLKEKESSTIYI-EDMSVESCMALLSYL 219 (295)
Q Consensus 141 ~~~~~~~~~~~~~l~~~~~~~Dv~l~v~~~~~~~hk~iLa~~S~~F~~~f~~~~~e~~~~~i~l-~~~~~~~f~~~L~~l 219 (295)
+.+++.+.+.+.++++++.+|||+|.++|++|+|||.||+++||||++||.+++.| ....|.| +++++++|+.+|+|+
T Consensus 10 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~~~~f~~ll~~~ 88 (127)
T 1r29_A 10 TRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEINPEGFNILLDFM 88 (127)
T ss_dssp TTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCCHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999988 7789999 999999999999999
Q ss_pred hCC-CcccccHHHHHHHHHHHhhcChHHHHHHHHHHHHhc
Q 038267 220 YGT-IKQEDFWKHRLALLGAANKYDIADLKDACEESLLED 258 (295)
Q Consensus 220 Y~~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 258 (295)
||+ +.++. +++.+++.+|++|+++.|++.|+++|.+.
T Consensus 89 Ytg~~~~~~--~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 89 YTSRLNLRE--GNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp HHSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred cCCCcCcCH--HHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 964 44554 78999999999999999999999999763
No 8
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.92 E-value=2.2e-25 Score=171.68 Aligned_cols=119 Identities=17% Similarity=0.285 Sum_probs=108.3
Q ss_pred cCChHHHHHHHHHHhhcCCcccEEEEeCCeEEEeEeeeeccCCHHHHHhhcCccCcCccceEEEC-CCCHHHHHHHHHHH
Q 038267 141 SVSAQSTLRCLARMLDEGILADTVIHTADGTLKAHKAVLSASSPVFQSMFHHDLKEKESSTIYIE-DMSVESCMALLSYL 219 (295)
Q Consensus 141 ~~~~~~~~~~~~~l~~~~~~~Dv~l~v~~~~~~~hk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~-~~~~~~f~~~L~~l 219 (295)
+.|++.+++.+.++++++.+|||+|.++|++|+|||.||+++|+||++||.+++.+. ..|.++ +++++.|+.+|+|+
T Consensus 17 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~--~~i~l~~~v~~~~~~~lL~~~ 94 (138)
T 2z8h_A 17 SVHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAE--LTVTLPEEVTVKGFEPLIQFA 94 (138)
T ss_dssp SSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTT--EEEECCTTSCHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCC--ceEEeCCCCCHHHHHHHHHHh
Confidence 467889999999999999999999999999999999999999999999999987663 589995 99999999999999
Q ss_pred hCC-CcccccHHHHHHHHHHHhhcChHHHHHHHHHHHHhcCChhh
Q 038267 220 YGT-IKQEDFWKHRLALLGAANKYDIADLKDACEESLLEDINSGN 263 (295)
Q Consensus 220 Y~~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~~ 263 (295)
||+ +.++. +++.+|+.+|++|+++.|++.|+++|.+.++..|
T Consensus 95 Ytg~~~i~~--~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sn 137 (138)
T 2z8h_A 95 YTAKLILSK--DNVDEVCRCVEFLSVHNIEESCFQFLKFKFLDST 137 (138)
T ss_dssp HHSCCCCCT--TTHHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCC
T ss_pred cCCCcccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHHHhccccc
Confidence 975 54554 7899999999999999999999999999888765
No 9
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.92 E-value=6e-26 Score=175.93 Aligned_cols=114 Identities=23% Similarity=0.342 Sum_probs=99.4
Q ss_pred cCChHHHHHHHHHHhhcCCcccEEEEeCCeEEEeEeeeeccCCHHHHHhhcCccCc--CccceEEECCCCHHHHHHHHHH
Q 038267 141 SVSAQSTLRCLARMLDEGILADTVIHTADGTLKAHKAVLSASSPVFQSMFHHDLKE--KESSTIYIEDMSVESCMALLSY 218 (295)
Q Consensus 141 ~~~~~~~~~~~~~l~~~~~~~Dv~l~v~~~~~~~hk~iLa~~S~~F~~~f~~~~~e--~~~~~i~l~~~~~~~f~~~L~~ 218 (295)
+.++..+++.+.++++++.+|||+|.++|++|+|||.||+++|+||++||.+++.+ +...+|.|+++++++|+.+|+|
T Consensus 28 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~f 107 (144)
T 2ppi_A 28 PQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDY 107 (144)
T ss_dssp TTHHHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHH
Confidence 34578899999999999999999999999999999999999999999999988765 6678999999999999999999
Q ss_pred HhCC-CcccccHHHHHHHHHHHhhcChHHHHHHHHHHHH
Q 038267 219 LYGT-IKQEDFWKHRLALLGAANKYDIADLKDACEESLL 256 (295)
Q Consensus 219 lY~~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 256 (295)
+||+ +.++. +++.+|+.+|++|+++.|++.|+++|.
T Consensus 108 iYtg~~~i~~--~~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 108 IFSGQIRLNE--DTIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp HTTSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred HhCCCCCCCH--HHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 9975 44444 789999999999999999999998763
No 10
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.92 E-value=1.1e-25 Score=168.87 Aligned_cols=111 Identities=20% Similarity=0.285 Sum_probs=99.5
Q ss_pred CChHHHHHHHHHHhhcCCcccEEEEeCCeEEEeEeeeeccCCHHHHHhhcCccCcCccceEEECCCCHHHHHHHHHHHhC
Q 038267 142 VSAQSTLRCLARMLDEGILADTVIHTADGTLKAHKAVLSASSPVFQSMFHHDLKEKESSTIYIEDMSVESCMALLSYLYG 221 (295)
Q Consensus 142 ~~~~~~~~~~~~l~~~~~~~Dv~l~v~~~~~~~hk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~lY~ 221 (295)
.|++.+++.+.++++++.+|||+|.++|++|+|||.||+++||||++||.+++ ..+|.|+++++++|+.+|+|+||
T Consensus 6 ~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l~~~~~~~f~~ll~~iYt 81 (119)
T 3b84_A 6 QHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS----GGSVVLPAGFAEIFGLLLDFFYT 81 (119)
T ss_dssp HHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT----CCCEEECGGGHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC----CCeEEeCCCCHHHHHHHHHHHcC
Confidence 45678999999999999999999999999999999999999999999998865 57899999999999999999996
Q ss_pred C-CcccccHHHHHHHHHHHhhcChHHHHHHHHHHHHhc
Q 038267 222 T-IKQEDFWKHRLALLGAANKYDIADLKDACEESLLED 258 (295)
Q Consensus 222 ~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 258 (295)
+ ...+. +++.+++.+|++|+++.|++.|+++|.+.
T Consensus 82 g~~~~~~--~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 82 GHLALTS--GNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp SCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred CCCccCH--HHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 5 44554 78999999999999999999999988753
No 11
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.92 E-value=5.5e-25 Score=165.60 Aligned_cols=110 Identities=25% Similarity=0.364 Sum_probs=100.6
Q ss_pred CChHHHHHHHHHHhhcCCcccEEEEeCCeEEEeEeeeeccCCHHHHHhhcCccCcCccceEEECCCCHHHHHHHHHHHhC
Q 038267 142 VSAQSTLRCLARMLDEGILADTVIHTADGTLKAHKAVLSASSPVFQSMFHHDLKEKESSTIYIEDMSVESCMALLSYLYG 221 (295)
Q Consensus 142 ~~~~~~~~~~~~l~~~~~~~Dv~l~v~~~~~~~hk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~lY~ 221 (295)
.+++.+.+.+.++++++.+|||+|.++|++|+|||.||+++||||++||.++ ..+|.++++++++|+.+|+|+||
T Consensus 10 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~ll~~~Yt 84 (121)
T 1buo_A 10 SHPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN-----SQHYTLDFLSPKTFQQILEYAYT 84 (121)
T ss_dssp THHHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC-----CcEEEeCCCCHHHHHHHHHhhcC
Confidence 4578899999999999999999999999999999999999999999999763 56899999999999999999997
Q ss_pred C-CcccccHHHHHHHHHHHhhcChHHHHHHHHHHHHhc
Q 038267 222 T-IKQEDFWKHRLALLGAANKYDIADLKDACEESLLED 258 (295)
Q Consensus 222 ~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 258 (295)
+ ...+. +++.+++.+|++|+++.|++.|+++|.+.
T Consensus 85 g~~~~~~--~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 85 ATLQAKA--EDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp SCCCCCG--GGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCcCCCH--HHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 5 44444 78999999999999999999999999764
No 12
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.92 E-value=1.6e-25 Score=171.65 Aligned_cols=115 Identities=19% Similarity=0.265 Sum_probs=98.5
Q ss_pred cCChHHHHHHHHHHhhcCCcccEEEEeCCeEEEeEeeeeccCCHHHHHhhcCccCcCccceEEECCCCHHHHHHHHHHHh
Q 038267 141 SVSAQSTLRCLARMLDEGILADTVIHTADGTLKAHKAVLSASSPVFQSMFHHDLKEKESSTIYIEDMSVESCMALLSYLY 220 (295)
Q Consensus 141 ~~~~~~~~~~~~~l~~~~~~~Dv~l~v~~~~~~~hk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~lY 220 (295)
+.|+..+++.+.++++++.+|||+|.++|++|+|||.||+++|+||++||.+++ ..+|.|+++++++|+.+|+|+|
T Consensus 6 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~~~~~~~f~~lL~fiY 81 (135)
T 2yy9_A 6 SGHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT----GGSVVLPAGFAEIFGLLLDFFY 81 (135)
T ss_dssp -CHHHHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC--------CCEEECGGGHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC----CCeEEeCCCCHHHHHHHHHHHh
Confidence 456788999999999999999999999999999999999999999999998865 5689999999999999999999
Q ss_pred CC-CcccccHHHHHHHHHHHhhcChHHHHHHHHHHHHhcCCh
Q 038267 221 GT-IKQEDFWKHRLALLGAANKYDIADLKDACEESLLEDINS 261 (295)
Q Consensus 221 ~~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~ 261 (295)
|+ +.++. +++.+|+.+|++|+++.|++.|+++|.+.+..
T Consensus 82 tg~~~i~~--~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~ 121 (135)
T 2yy9_A 82 TGHLALTS--GNRDQVLLAAKELRVPEAVELCQSFQPQTSVG 121 (135)
T ss_dssp HSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHCCC-----
T ss_pred CCCCCCCH--HHHHHHHHHHHHhCcHHHHHHHHHHHHHhccC
Confidence 64 55555 78999999999999999999999999887653
No 13
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.92 E-value=4.9e-25 Score=164.69 Aligned_cols=109 Identities=17% Similarity=0.372 Sum_probs=99.3
Q ss_pred CChHHHHHHHHHHhhcCCcccEEEEeCCeEEEeEeeeeccCCHHHHHhhcCccCcCccceEEEC--CCCHHHHHHHHHHH
Q 038267 142 VSAQSTLRCLARMLDEGILADTVIHTADGTLKAHKAVLSASSPVFQSMFHHDLKEKESSTIYIE--DMSVESCMALLSYL 219 (295)
Q Consensus 142 ~~~~~~~~~~~~l~~~~~~~Dv~l~v~~~~~~~hk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~--~~~~~~f~~~L~~l 219 (295)
.|+..+.+.+.++++++.+|||+|.++|++|+|||.||+++||||++||.++ ....|.|+ ++++++|+.+|+|+
T Consensus 4 ~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~~~~f~~ll~~~ 79 (116)
T 2vpk_A 4 HHCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST----SENNVFLDQSQVKADGFQKLLEFI 79 (116)
T ss_dssp HHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC----CCSCEECCTTTCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC----CCCeEEeecCCCCHHHHHHHHHHH
Confidence 3578899999999999999999999999999999999999999999999876 36678888 99999999999999
Q ss_pred hCC-CcccccHHHHHHHHHHHhhcChHHHHHHHHHHHH
Q 038267 220 YGT-IKQEDFWKHRLALLGAANKYDIADLKDACEESLL 256 (295)
Q Consensus 220 Y~~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 256 (295)
||+ +..+. +++.+++.+|++|+++.|++.|+++|.
T Consensus 80 Yt~~~~~~~--~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 80 YTGTLNLDS--WNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp HHSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cCCCcccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 974 54554 789999999999999999999999985
No 14
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.92 E-value=5e-25 Score=162.79 Aligned_cols=103 Identities=37% Similarity=0.506 Sum_probs=89.3
Q ss_pred HhhcCCcccEEEEeCC----eEEEeEeeeeccCCHHHHHhhcCccCcCccceEEECCCCHHHHHHHHHHHhCC-Cccccc
Q 038267 154 MLDEGILADTVIHTAD----GTLKAHKAVLSASSPVFQSMFHHDLKEKESSTIYIEDMSVESCMALLSYLYGT-IKQEDF 228 (295)
Q Consensus 154 l~~~~~~~Dv~l~v~~----~~~~~hk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~lY~~-~~~~~~ 228 (295)
+++++.+|||+|.+++ ++|+|||.||+++||||++||.+++.|+. .+|.++++++++|+.+|+|+||+ ...+.
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~- 79 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEIDLEA- 79 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCT-
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCccCCH-
Confidence 5678899999999998 89999999999999999999999999988 99999999999999999999975 54554
Q ss_pred HHHHHHHHHHHhhcChHHHHHHHHHHHHhcC
Q 038267 229 WKHRLALLGAANKYDIADLKDACEESLLEDI 259 (295)
Q Consensus 229 ~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~ 259 (295)
+++.+++.+|++|+++.|++.|+++|.+.+
T Consensus 80 -~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 80 -DTVLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp -TTHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 789999999999999999999999998753
No 15
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.91 E-value=7.8e-26 Score=171.30 Aligned_cols=111 Identities=21% Similarity=0.314 Sum_probs=101.0
Q ss_pred cCChHHHHHHHHHHhhcCCcccEEEEeCCeEEEeEeeeeccCCHHHHHhhcCccCcCccceEEECC-CCHHHHHHHHHHH
Q 038267 141 SVSAQSTLRCLARMLDEGILADTVIHTADGTLKAHKAVLSASSPVFQSMFHHDLKEKESSTIYIED-MSVESCMALLSYL 219 (295)
Q Consensus 141 ~~~~~~~~~~~~~l~~~~~~~Dv~l~v~~~~~~~hk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~~-~~~~~f~~~L~~l 219 (295)
+.+++.+++.+.++++++.+|||+|.++|++|+|||.||+++|+||++||.+++.+ ..+|.+++ ++++.|+.+|+|+
T Consensus 13 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~~~~~~f~~~l~~i 90 (125)
T 3ohu_A 13 TVHCTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN--DLVVSLPEEVTARGFGPLLQFA 90 (125)
T ss_dssp SSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS--SCEEECCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC--CcEEEeCCCCCHHHHHHHHHhH
Confidence 45678899999999999999999999999999999999999999999999998776 67899998 9999999999999
Q ss_pred hCC-CcccccHHHHHHHHHHHhhcChHHHHHHHHHHH
Q 038267 220 YGT-IKQEDFWKHRLALLGAANKYDIADLKDACEESL 255 (295)
Q Consensus 220 Y~~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l 255 (295)
||+ +..+. +++.+++.+|++|+++.|++.|+++|
T Consensus 91 Ytg~~~~~~--~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 91 YTAKLLLSR--ENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp TTSEEEECT--TTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred cCCceEECH--HHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 986 44444 78999999999999999999998754
No 16
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.91 E-value=1.5e-25 Score=169.48 Aligned_cols=112 Identities=20% Similarity=0.331 Sum_probs=98.5
Q ss_pred cCChHHHHHHHHHHhhcCCcccEEEEeCCeEEEeEeeeeccCCHHHHHhhcCccCcCccceEEE-CCCCHHHHHHHHHHH
Q 038267 141 SVSAQSTLRCLARMLDEGILADTVIHTADGTLKAHKAVLSASSPVFQSMFHHDLKEKESSTIYI-EDMSVESCMALLSYL 219 (295)
Q Consensus 141 ~~~~~~~~~~~~~l~~~~~~~Dv~l~v~~~~~~~hk~iLa~~S~~F~~~f~~~~~e~~~~~i~l-~~~~~~~f~~~L~~l 219 (295)
+.|++.+++.+.++++++.+|||+|.++|++|+|||.||+++||||++||.+++.++ ..|.+ ++++++.|+.+|+|+
T Consensus 10 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~--~~i~l~~~v~~~~f~~lL~~i 87 (124)
T 2ihc_A 10 SVHSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE--LNITLPEEVTVKGFEPLIQFA 87 (124)
T ss_dssp SSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C--EEEECCTTSCHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC--ceEeecCCcCHHHHHHHHHHh
Confidence 356788999999999999999999999999999999999999999999999987664 57899 499999999999999
Q ss_pred hCC-CcccccHHHHHHHHHHHhhcChHHHHHHHHHHHH
Q 038267 220 YGT-IKQEDFWKHRLALLGAANKYDIADLKDACEESLL 256 (295)
Q Consensus 220 Y~~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 256 (295)
||+ +.++. +++.+++.+|++|+++.|++.|+++|.
T Consensus 88 Ytg~~~i~~--~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 88 YTAKLILSK--ENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHSEEEEET--TTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred cCCCcccCH--HHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 975 44444 789999999999999999999998864
No 17
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.90 E-value=6.3e-25 Score=167.17 Aligned_cols=111 Identities=24% Similarity=0.360 Sum_probs=94.2
Q ss_pred CChHHHHHHHHHHhhcCCcccEEEEeCCeEEEeEeeeeccCCHHHHHhhcCccCcCccceEEEC-CCCHHHHHHHHHHHh
Q 038267 142 VSAQSTLRCLARMLDEGILADTVIHTADGTLKAHKAVLSASSPVFQSMFHHDLKEKESSTIYIE-DMSVESCMALLSYLY 220 (295)
Q Consensus 142 ~~~~~~~~~~~~l~~~~~~~Dv~l~v~~~~~~~hk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~-~~~~~~f~~~L~~lY 220 (295)
.++..+++.+.++++++.+|||+|.++|++|+|||.||+++|+||++||.++ ...+|.|+ ++++++|+.+|+|+|
T Consensus 15 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l~~~~~~~~f~~ll~~iY 90 (129)
T 3ga1_A 15 NFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS----RSAVVELPAAVQPQSFQQILSFCY 90 (129)
T ss_dssp THHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC----CCSEEECCTTCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC----CCCEEEECCCCCHHHHHHHHHHHh
Confidence 4567899999999999999999999999999999999999999999999875 56799996 999999999999999
Q ss_pred CC-CcccccHHHHHHHHHHHhhcChHHHHHHHHHHHHhc
Q 038267 221 GT-IKQEDFWKHRLALLGAANKYDIADLKDACEESLLED 258 (295)
Q Consensus 221 ~~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 258 (295)
|+ ..++. +++.+++.+|++|+++.|++.|+++|.+.
T Consensus 91 tg~~~i~~--~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 91 TGRLSMNV--GDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp HSEEECCT--TTHHHHHHHHHHTTBTTSSCC--------
T ss_pred CCccccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 75 44444 67999999999999999999999999875
No 18
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.90 E-value=2.1e-24 Score=161.85 Aligned_cols=108 Identities=22% Similarity=0.322 Sum_probs=98.0
Q ss_pred CChHHHHHHHHHHhhcCCcccEEEEeCCeEEEeEeeeeccCCHHHHHhhcCccCcCccceEEECCCCHHHHHHHHHHHhC
Q 038267 142 VSAQSTLRCLARMLDEGILADTVIHTADGTLKAHKAVLSASSPVFQSMFHHDLKEKESSTIYIEDMSVESCMALLSYLYG 221 (295)
Q Consensus 142 ~~~~~~~~~~~~l~~~~~~~Dv~l~v~~~~~~~hk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~lY~ 221 (295)
.|++.+++.+.++++++.+|||+|.++|++|+|||.||+++|+||++||.+ ...+|.+++++++.|+.+|+|+||
T Consensus 9 ~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~-----~~~~i~l~~~~~~~f~~ll~~~Yt 83 (119)
T 2q81_A 9 QHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVD-----QKDVVHLDISNAAGLGQVLEFMYT 83 (119)
T ss_dssp HHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHH-----CCSGGGGGGCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcC-----CCCEEEeCCCCHHHHHHHHHHHcC
Confidence 457889999999999999999999999999999999999999999999975 245788899999999999999996
Q ss_pred C-CcccccHHHHHHHHHHHhhcChHHHHHHHHHHHH
Q 038267 222 T-IKQEDFWKHRLALLGAANKYDIADLKDACEESLL 256 (295)
Q Consensus 222 ~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 256 (295)
+ ...+. +++.+++.+|++|+++.|++.|+++|.
T Consensus 84 g~~~i~~--~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 84 AKLSLSP--ENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp SCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CCCccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 4 54554 689999999999999999999999875
No 19
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.88 E-value=1.9e-22 Score=150.33 Aligned_cols=104 Identities=20% Similarity=0.270 Sum_probs=92.7
Q ss_pred cCChHHHHHHHHHHhhcCCcccEEEEeCCeEEEeEeeeeccCCHHHHHhhcCccCcCccceEEECCCCHHHHHHHHHHHh
Q 038267 141 SVSAQSTLRCLARMLDEGILADTVIHTADGTLKAHKAVLSASSPVFQSMFHHDLKEKESSTIYIEDMSVESCMALLSYLY 220 (295)
Q Consensus 141 ~~~~~~~~~~~~~l~~~~~~~Dv~l~v~~~~~~~hk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~lY 220 (295)
+.+++.+++.+.++++++.+|||+|.++|+.|+|||.||+++|+||++||.++ ..+|.++++++++|+.+|+|+|
T Consensus 12 ~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~-----~~~i~l~~~~~~~f~~~l~~~Y 86 (116)
T 3fkc_A 12 IQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA-----GQVVELSFIRAEIFAEILNYIY 86 (116)
T ss_dssp TTHHHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHHHHhhc
Confidence 34578899999999999999999999999999999999999999999999764 5689999999999999999999
Q ss_pred CCCcccccHHHHHHHHHHHhhcChHHHHH
Q 038267 221 GTIKQEDFWKHRLALLGAANKYDIADLKD 249 (295)
Q Consensus 221 ~~~~~~~~~~~~~~ll~~A~~~~~~~l~~ 249 (295)
|+.......+++.+++.+|++|+++.|++
T Consensus 87 tg~~~~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 87 SSKIVRVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp TSCCCSCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred CCCcCCCCHHHHHHHHHHHHHhCccccCc
Confidence 86432222389999999999999999874
No 20
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.88 E-value=2.9e-23 Score=155.30 Aligned_cols=103 Identities=21% Similarity=0.268 Sum_probs=88.8
Q ss_pred CChHHHHHHHHHHhhcCCcccEEEEeCCeEEEeEeeeeccCCHHHHHhhcCccCcCccceEEECCCCHHHHHHHHHHHhC
Q 038267 142 VSAQSTLRCLARMLDEGILADTVIHTADGTLKAHKAVLSASSPVFQSMFHHDLKEKESSTIYIEDMSVESCMALLSYLYG 221 (295)
Q Consensus 142 ~~~~~~~~~~~~l~~~~~~~Dv~l~v~~~~~~~hk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~lY~ 221 (295)
.++..+++.+. +.++.+|||+|.++|++|+|||.|||++|+||++ ...+|.|+++++++|+.+|+|+||
T Consensus 14 ~~~~~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~---------~~~~i~l~~v~~~~f~~ll~fiYt 82 (119)
T 3m5b_A 14 YGSDRLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR---------RGQWALGEGISPSTFAQLLNFVYG 82 (119)
T ss_dssp TTTCHHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC---------CEEEECCSSCCHHHHHHHHHHHTT
T ss_pred cchHHHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc---------CCCEEEeCCCCHHHHHHHHHHHcC
Confidence 34566777775 5678999999999999999999999999999974 356899999999999999999997
Q ss_pred C-CcccccHHHHHHHHHHHhhcChHHHHHHHHHHHHh
Q 038267 222 T-IKQEDFWKHRLALLGAANKYDIADLKDACEESLLE 257 (295)
Q Consensus 222 ~-~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~ 257 (295)
+ +.++. +++.+++.+|++|+++.|++.|++++..
T Consensus 83 g~~~i~~--~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 83 ESVELQP--GELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp CCEEECG--GGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CCcCcCH--HHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 5 55555 7899999999999999999999998765
No 21
>3ivv_A Speckle-type POZ protein; protein binding, nucleus, UBL conjugation pathway, ligase; 1.25A {Homo sapiens} SCOP: b.8.1.1 PDB: 3ivq_A 3ivb_A 3hsv_A 3hqh_A 3hqm_A 3hql_A 2cr2_A
Probab=99.81 E-value=6.9e-20 Score=142.03 Aligned_cols=114 Identities=16% Similarity=0.191 Sum_probs=86.3
Q ss_pred cceeeeeEEEEEeecCC-----CCccccCCceecce---eeEEEEEeCCe-----eEEEEeecCCCCCCCCCceEEEEEE
Q 038267 6 VETISRLAQWRIDNFGP-----CSYKKSDPFKIGIW---NWHLSVEKNRY-----LYVRLFPEPSRLSKEQPPFARFIIR 72 (295)
Q Consensus 6 ~~~~~~~~~w~I~~~~~-----~~~~~S~~F~~gg~---~W~l~~yp~g~-----~~vsl~l~~~~~~~~~~v~a~f~~~ 72 (295)
-+++.++|.|+|.||+. ++++.||+|.+||| +|+|++||+|. .++||||.+.+. ..|.+.|+|+|+
T Consensus 6 ~~~~~~~~~w~I~~fs~~~~~~g~~~~S~~F~~gg~~g~~W~i~~yP~G~~~~~~~~lSlyL~l~~~-~~w~v~a~f~l~ 84 (145)
T 3ivv_A 6 GKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC-PKSEVRAKFKFS 84 (145)
T ss_dssp CCCCEEEEEEEESSGGGCCCCTTCCEECCCEEESGGGCEEEEEEEETTCSSGGGTTEEEEEEEEEEC-SSSEEEEEEEEE
T ss_pred CcEEEEEEEEEEcCchHHhhcCCCEEECCCcCCCCcCCceEEEEEEcCCCCCCCCCeEEEEEEEcCC-CCCcEEEEEEEE
Confidence 46788999999999963 56899999999996 99999999983 589999887553 579999999999
Q ss_pred EEeCCCCCeeeeeeccceecccCCceeee-e-----------eeeeeceeEEEeeeeeee
Q 038267 73 VSNGGANRRLYISQVNERLLRTCEDFVWY-V-----------DCTIHGRFIVDVEFLELK 120 (295)
Q Consensus 73 l~~~~~~~~~~~~~~~~~~~~~~~~~~w~-~-----------~~~~~~~l~ve~~v~~~~ 120 (295)
|+|++++..........+.|....+|||. + +|++||+++|+|+|.+++
T Consensus 85 llnq~~~~~~~~~~~~~~~F~~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~I~~~V~V~~ 144 (145)
T 3ivv_A 85 ILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQ 144 (145)
T ss_dssp EECTTSCEEEEEECSSCEEEETTCEEEEEEEEEHHHHHCGGGCSSGGGCEEEEEEEEECC
T ss_pred EEecCCCceeeecccceEEecCCCCcCHHHeEEhhhhccccCCcEeCCEEEEEEEEEEEe
Confidence 99999876443222222233334444443 1 378899999999987643
No 22
>2foj_A Ubiquitin carboxyl-terminal hydrolase 7; MATH domain, hydrolase; 1.60A {Homo sapiens} PDB: 1yze_A 1yy6_A 2foo_A 2fop_A 3mqr_A 3mqs_C 2f1w_A 2f1x_A 2f1y_A 2xxn_A
Probab=99.78 E-value=2.1e-18 Score=135.16 Aligned_cols=111 Identities=12% Similarity=0.147 Sum_probs=83.2
Q ss_pred eeeeeEEEEEeecCC-CCccccCCceecceeeEEEEEeCC------eeEEEEeecCCCC--CCCCCceEEEEEEEEeCCC
Q 038267 8 TISRLAQWRIDNFGP-CSYKKSDPFKIGIWNWHLSVEKNR------YLYVRLFPEPSRL--SKEQPPFARFIIRVSNGGA 78 (295)
Q Consensus 8 ~~~~~~~w~I~~~~~-~~~~~S~~F~~gg~~W~l~~yp~g------~~~vsl~l~~~~~--~~~~~v~a~f~~~l~~~~~ 78 (295)
...++|.|+|+||+. .+.+.||+|.+||++|+|++||+| ..++||||.+... +.+|.+.|+|+|+|+|+++
T Consensus 16 ~~~~~~~w~I~nfS~~~~~~~S~~f~~gg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~~~~~~w~v~a~~~l~l~~~~~ 95 (155)
T 2foj_A 16 RSEATFQFTVERFSRLSESVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAESDSTSWSCHAQAVLKIINYRD 95 (155)
T ss_dssp CSEEEEEEEESSGGGCCSCEECCCEEETTEEEEEEEEEEC------CBEEEEEEEESTTCCCSSCEEEEEEEEEECCSSC
T ss_pred CCCcEEEEEECChhhcCCceEcCCEEECCccEEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCEEEEEEEEEEEcCCC
Confidence 456999999999974 467999999999999999999986 2478888766432 3469999999999999988
Q ss_pred CCeeeeeeccceecccCCceeee-e-----------eeeeeceeEEEeeeee
Q 038267 79 NRRLYISQVNERLLRTCEDFVWY-V-----------DCTIHGRFIVDVEFLE 118 (295)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~w~-~-----------~~~~~~~l~ve~~v~~ 118 (295)
+..+......++|.....+|||. + +|++||+++|+|+|.+
T Consensus 96 ~~~~~~~~~~~~F~~~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~Ie~~V~V 147 (155)
T 2foj_A 96 DEKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQA 147 (155)
T ss_dssp GGGCEEEEEEEEEETTBCEEEEEEEEEHHHHTCTTTSSCBTTBEEEEEEEEE
T ss_pred CcceEEeccEEEeCCCCCCEeECCeEEHHHhcCcCCCceECCEEEEEEEEEE
Confidence 76443333333444434444443 1 4788999999999754
No 23
>4gjh_A TNF receptor-associated factor 5; TRAF domain, immune system; 2.81A {Mus musculus}
Probab=99.75 E-value=3.3e-18 Score=136.93 Aligned_cols=112 Identities=11% Similarity=0.042 Sum_probs=82.4
Q ss_pred cceeeeeEEEEEeecC-------CC--CccccCCceec--ceeeEEEEEeCCe-----eEEEEeecCCCCC----CCCCc
Q 038267 6 VETISRLAQWRIDNFG-------PC--SYKKSDPFKIG--IWNWHLSVEKNRY-----LYVRLFPEPSRLS----KEQPP 65 (295)
Q Consensus 6 ~~~~~~~~~w~I~~~~-------~~--~~~~S~~F~~g--g~~W~l~~yp~g~-----~~vsl~l~~~~~~----~~~~v 65 (295)
..+..|+|.|+|.||+ .| .++.||+|.+| ||+|+|++||+|. .++||||.+.+.. ..|++
T Consensus 19 ~~~~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~~g~~G~~W~i~~yP~G~~~~~~~~lSlyL~l~~~~~d~~l~W~v 98 (178)
T 4gjh_A 19 GACYSGKLIWKVTDYRVKKREAVEGHTVSVFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPF 98 (178)
T ss_dssp HCCSSSEEEEEECCHHHHHHHHHTTSCCCEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEBCCTTGGGSCSSC
T ss_pred CcccceEEEEEECCHHHHHhhhhcCCCcEEECCCeEeCCCCeEEEEEEEECCCCCCCCCEEEEEEEEecCCCCcccCCce
Confidence 3467899999999985 23 37999999999 9999999999993 5899998875433 36999
Q ss_pred eEEEEEEEEeCCCCCeeeeee----ccceecc-----cCCceeee-e-----------eeeeeceeEEEeeee
Q 038267 66 FARFIIRVSNGGANRRLYISQ----VNERLLR-----TCEDFVWY-V-----------DCTIHGRFIVDVEFL 117 (295)
Q Consensus 66 ~a~f~~~l~~~~~~~~~~~~~----~~~~~~~-----~~~~~~w~-~-----------~~~~~~~l~ve~~v~ 117 (295)
.|+|+|+|+|++++....... .....|. ...+|||. | +|++||+++|+|+|.
T Consensus 99 ~a~~~l~Lldq~~~~~~~~~~~~~~~~~~~F~~p~~~~~~~wG~~~Fi~~~~L~~~~~~yL~dD~l~I~~~V~ 171 (178)
T 4gjh_A 99 RQRVTLMLLDQSGKKNHIVETFKADPNSSSFKRPDGEMNIASGCPRFVSHSTLENSKNTYIKDDTLFLKVAVD 171 (178)
T ss_dssp CCEEEEEECCTTSSCCCEEEEEECCTTCGGGSCCSSSBCCCEEEEEEEEHHHHHCTTCCSSBTTBEEEEEEEC
T ss_pred EEEEEEEEEcCCCCcceeEEeeccCCccccccCCcccccCCcChhheeEHHHhhccccCcCcCCEEEEEEEEE
Confidence 999999999998765433321 0112222 12344443 1 478899999999973
No 24
>4ghu_A TNF receptor-associated factor 3; alpha/beta, innate immunity, IFN pathway, immune system; 2.20A {Mus musculus} PDB: 2gkw_A 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=99.74 E-value=4e-18 Score=138.31 Aligned_cols=112 Identities=14% Similarity=0.069 Sum_probs=82.5
Q ss_pred ceeeeeEEEEEeecC---------CCCccccCCceec--ceeeEEEEEeCCe-----eEEEEeecCCCC----CCCCCce
Q 038267 7 ETISRLAQWRIDNFG---------PCSYKKSDPFKIG--IWNWHLSVEKNRY-----LYVRLFPEPSRL----SKEQPPF 66 (295)
Q Consensus 7 ~~~~~~~~w~I~~~~---------~~~~~~S~~F~~g--g~~W~l~~yp~g~-----~~vsl~l~~~~~----~~~~~v~ 66 (295)
.+.+|+|.|+|.||+ .|+++.||+|.+| |++|+|++||+|. ++|||||.+.+. ...|++.
T Consensus 36 ~~~~g~~~w~I~nfS~~~~~~~~~~g~~i~S~~F~vg~~Gy~W~i~~yPnG~~~~~~~~lSlyL~l~~g~~D~~l~wp~~ 115 (198)
T 4ghu_A 36 ASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFK 115 (198)
T ss_dssp CCSSSEEEEEECCHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEECCTTGGGSCSSCC
T ss_pred cccccEEEEEECCHHHHHhhhccCCCcEEECCCeEECCCCcEEEEEEEeCCCCCCCCCeEEEEEEecCCccCCCCCceEE
Confidence 457799999999985 2478999999999 9999999999993 489999987542 2379999
Q ss_pred EEEEEEEEeCCCCCeeeeee--------ccceecc-cCCceeee-e---------eeeeeceeEEEeeeee
Q 038267 67 ARFIIRVSNGGANRRLYISQ--------VNERLLR-TCEDFVWY-V---------DCTIHGRFIVDVEFLE 118 (295)
Q Consensus 67 a~f~~~l~~~~~~~~~~~~~--------~~~~~~~-~~~~~~w~-~---------~~~~~~~l~ve~~v~~ 118 (295)
|+|+|+|+|+.+++...... .+.+.+. ...+|||. | +|+.||+++|+|+|.+
T Consensus 116 a~~~l~Lldq~~~~~~~~~~~~~~~~~~~f~rp~~~~~~~wG~~~Fi~~~~L~~~gyL~dD~l~I~~~V~v 186 (198)
T 4ghu_A 116 QKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDT 186 (198)
T ss_dssp CCEEEEECCCSTTCCCEEEEECCCTTSGGGSCCSSSBCCCEEEEEEEEHHHHHHTTSCBTTBEEEEEEECC
T ss_pred EEEEEEEEcCCCCccceEEEeecCcccceecCCcccCcCCcCchhEeEHHHhhhcCCeeCCEEEEEEEEEe
Confidence 99999999998765433221 1222122 12343333 1 4788999999999754
No 25
>1lb6_A TNF receptor-associated factor 6; TRAF6-CD40 complex, signaling protein; 1.80A {Homo sapiens} SCOP: b.8.1.1 PDB: 1lb5_A 1lb4_A
Probab=99.73 E-value=1.5e-17 Score=130.99 Aligned_cols=111 Identities=14% Similarity=0.089 Sum_probs=78.7
Q ss_pred eeeeEEEEEeecC-------CCC--ccccCCceec--ceeeEEEEEeCC------eeEEEEeecCCCC----CCCCCceE
Q 038267 9 ISRLAQWRIDNFG-------PCS--YKKSDPFKIG--IWNWHLSVEKNR------YLYVRLFPEPSRL----SKEQPPFA 67 (295)
Q Consensus 9 ~~~~~~w~I~~~~-------~~~--~~~S~~F~~g--g~~W~l~~yp~g------~~~vsl~l~~~~~----~~~~~v~a 67 (295)
..|+|.|+|.||+ .|+ .+.||+|.+| ||+|+|++||+| ..++||||.+.+. ..+|++.|
T Consensus 3 ~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~vg~~Gy~w~i~~yP~G~~~~~~~~~lSlyL~l~~~~~d~~l~wp~~a 82 (160)
T 1lb6_A 3 CNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQG 82 (160)
T ss_dssp CCEEEEEEECCHHHHHHHHHTTCCEEEECCCEESSSSCCEEEEEEEECCTTCTTTTTEEEEEEEEECCTTGGGSCSSCCS
T ss_pred cCcEEEEEECCHHHHHHhhhcCCCeEEECcCeecCCCCeeEEEEEEecCCCCCCCCCEEEEEEEEeecCCCccCCCceee
Confidence 4689999999984 355 8999999999 999999999997 2489999887532 23599999
Q ss_pred EEEEEEEeCCCCCe--eeeee-----ccceecc---cCCceeeee------------eeeeeceeEEEeeeeee
Q 038267 68 RFIIRVSNGGANRR--LYISQ-----VNERLLR---TCEDFVWYV------------DCTIHGRFIVDVEFLEL 119 (295)
Q Consensus 68 ~f~~~l~~~~~~~~--~~~~~-----~~~~~~~---~~~~~~w~~------------~~~~~~~l~ve~~v~~~ 119 (295)
+|+|+|+|+.++.. ..... ....+.+ .....+||+ +|+.||+++|+|+|.++
T Consensus 83 ~~~l~lldq~~~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~G~~~Fi~~~~L~~~~yl~dD~l~I~~~V~v~ 156 (160)
T 1lb6_A 83 TIRLTILDQSEAPVRQNHEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTR 156 (160)
T ss_dssp EEEEEECCCSCTTSCCCEEEEEECCTTSGGGSCCSSSBCSEEEEEEEEEEGGGGGTSCCCBTTBEEEEEEEEC-
T ss_pred eEEEEEEcCCCccccccceEEeecCCcchhccCCcccCCCCCcCEeeEeEHHHhhhCCCccCCEEEEEEEEEEe
Confidence 99999999987531 11111 0111111 112224664 47889999999998653
No 26
>2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=99.70 E-value=1e-17 Score=135.64 Aligned_cols=111 Identities=14% Similarity=0.098 Sum_probs=81.1
Q ss_pred eeeeeEEEEEeecCC-------CC--ccccCCceec--ceeeEEEEEeCCe-----eEEEEeecCCCCC----CCCCceE
Q 038267 8 TISRLAQWRIDNFGP-------CS--YKKSDPFKIG--IWNWHLSVEKNRY-----LYVRLFPEPSRLS----KEQPPFA 67 (295)
Q Consensus 8 ~~~~~~~w~I~~~~~-------~~--~~~S~~F~~g--g~~W~l~~yp~g~-----~~vsl~l~~~~~~----~~~~v~a 67 (295)
.+.|+|.|+|.||+. |+ .+.||+|.+| ||+|+|++||+|. .++|||+.+.+.. ..|++.|
T Consensus 37 ~~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~vg~~Gykw~i~~yPnG~~~~~~~~lSlyL~l~~~~~d~~l~wp~~a 116 (192)
T 2gkw_A 37 SYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQ 116 (192)
T ss_dssp CCSSEEEEEEECHHHHHHHHHHTSCSCEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEECCTTGGGSCSSCCC
T ss_pred ccCcEEEEEECCHHHHHHHhhcCCCceEEcccEEECCCCcEEEEEEEeCCCCCCCCCEEEEEEEEecCCCCccCCCcEEE
Confidence 467999999999852 44 5999999999 9999999999994 4899999875322 3699999
Q ss_pred EEEEEEEeCCCCCeeeeee-----ccceeccc----CCceeee-e---------eeeeeceeEEEeeeee
Q 038267 68 RFIIRVSNGGANRRLYISQ-----VNERLLRT----CEDFVWY-V---------DCTIHGRFIVDVEFLE 118 (295)
Q Consensus 68 ~f~~~l~~~~~~~~~~~~~-----~~~~~~~~----~~~~~w~-~---------~~~~~~~l~ve~~v~~ 118 (295)
+|+|+|+|+.++....... ....|.+. ..+|||. | +|+.||+++|+|+|.+
T Consensus 117 ~~~l~lldq~~~~~~~~~~~~~~~~~~~F~~~~~~~~~~wG~~~Fi~~~~L~~~gyl~dD~l~I~~~V~v 186 (192)
T 2gkw_A 117 KVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDT 186 (192)
T ss_dssp CEEEEECCCSTTCCCEEEEECCCTTCTTSSCCSSSBCCCEEEEEEEEHHHHHHTTSCBTTEEEEEEEECC
T ss_pred EEEEEEECCCCCccceEEEEecCCCcccccCCCCCCcCCCChHHEeEHHHhCcCCCeeCCEEEEEEEEEc
Confidence 9999999998875433221 11223221 2344443 1 4788999999999744
No 27
>1ca9_A TRAF2, protein (TNF receptor associated factor 2); TNF signaling, TRAF, adapter protein, cell surviVal; 2.30A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1qsc_A 1czz_A
Probab=99.69 E-value=4.9e-17 Score=131.77 Aligned_cols=111 Identities=11% Similarity=0.001 Sum_probs=80.7
Q ss_pred eeeeeEEEEEeecC-------CCC--ccccCCcee--cceeeEEEEEeCCe-----eEEEEeecCCCCC----CCCCceE
Q 038267 8 TISRLAQWRIDNFG-------PCS--YKKSDPFKI--GIWNWHLSVEKNRY-----LYVRLFPEPSRLS----KEQPPFA 67 (295)
Q Consensus 8 ~~~~~~~w~I~~~~-------~~~--~~~S~~F~~--gg~~W~l~~yp~g~-----~~vsl~l~~~~~~----~~~~v~a 67 (295)
...++|.|+|.||+ .|+ ++.||+|.+ ||++|+|++||+|. .++||||.+.+.. .+|++.|
T Consensus 40 ~~~g~~~w~I~nfS~~~~~~~~g~~~~i~S~~F~v~~gG~~W~i~~yP~G~~~~~~~~lSlyL~l~~~~~~~~~~W~~~a 119 (192)
T 1ca9_A 40 TYDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQ 119 (192)
T ss_dssp CSSSEEEEEEESHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEECCTTGGGSCSSCCC
T ss_pred ccCceEEEEECCHHHHHHHhhcCCCceEECceEEeCCCCeEEEEEEEeCCCCCCCCCEEEEEEEEccCCCCCcCCCceEE
Confidence 57799999999985 244 599999999 99999999999983 5899998774432 4699999
Q ss_pred EEEEEEEeCCCCCeeeeee-------ccceecc-cCCceeee-e----------eeeeeceeEEEeeeee
Q 038267 68 RFIIRVSNGGANRRLYISQ-------VNERLLR-TCEDFVWY-V----------DCTIHGRFIVDVEFLE 118 (295)
Q Consensus 68 ~f~~~l~~~~~~~~~~~~~-------~~~~~~~-~~~~~~w~-~----------~~~~~~~l~ve~~v~~ 118 (295)
+|+|+|+|++++....... .+.+... ...+|||. | +|++||+++|+|+|.+
T Consensus 120 ~~~l~lldq~~~~~~~~~~~~~~~~~~f~rp~~~~~~~wG~~~Fi~~~~L~~~~gyl~dD~l~I~~~V~V 189 (192)
T 1ca9_A 120 KVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDL 189 (192)
T ss_dssp CEEEEECCTTSSCCEEEEECCCTTSGGGSCCSSSBCCCEEEEEEEETHHHHSSCSSCBTTEEEEEEEECC
T ss_pred EEEEEEECCCCCceeeEeeccCCchhhhcCCccCCCCCcChhheeEHHHhhhccCCEeCCEEEEEEEEEe
Confidence 9999999998874321110 1221111 12344443 1 3788999999999754
No 28
>1d00_A Tumor necrosis factor receptor associated protein 2; B-sandwich, protein-peptide complex, apoptosis; 2.00A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1ca4_A 1d0j_A 1f3v_B 1czy_A 1d01_A 1d0a_A
Probab=99.68 E-value=8.1e-17 Score=127.82 Aligned_cols=111 Identities=11% Similarity=0.002 Sum_probs=80.0
Q ss_pred eeeeeEEEEEeecC-------CCC--ccccCCce--ecceeeEEEEEeCCe-----eEEEEeecCCCCC----CCCCceE
Q 038267 8 TISRLAQWRIDNFG-------PCS--YKKSDPFK--IGIWNWHLSVEKNRY-----LYVRLFPEPSRLS----KEQPPFA 67 (295)
Q Consensus 8 ~~~~~~~w~I~~~~-------~~~--~~~S~~F~--~gg~~W~l~~yp~g~-----~~vsl~l~~~~~~----~~~~v~a 67 (295)
++.++|.|+|.||+ .|+ .+.||+|. +||++|+|++||+|. .++||||.+.+.. .+|++.|
T Consensus 16 ~~~g~~~w~I~nfS~~~~~~~~g~~~~i~S~~F~~~~gG~~W~i~~yP~G~~~~~~~~lSlyL~l~~~~~~~~~~w~~~~ 95 (168)
T 1d00_A 16 TYDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQ 95 (168)
T ss_dssp CSSSEEEEEEESHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEECCTTGGGSCSSCCC
T ss_pred ccCCEEEEEECCHHHHHHHhhcCCCeEEECCCeecCCCCEEEEEEEEeCCCCCCCCcEEEEEEEEecCCCCccCCCceEE
Confidence 57899999999985 344 39999995 899999999999983 5899998774421 4799999
Q ss_pred EEEEEEEeCCCCCeeeeeec----cceecc----cCCceeee-e----------eeeeeceeEEEeeeee
Q 038267 68 RFIIRVSNGGANRRLYISQV----NERLLR----TCEDFVWY-V----------DCTIHGRFIVDVEFLE 118 (295)
Q Consensus 68 ~f~~~l~~~~~~~~~~~~~~----~~~~~~----~~~~~~w~-~----------~~~~~~~l~ve~~v~~ 118 (295)
+|+|+|+|+++......... ...+.+ ...+|||. | +|++||+++|+|+|.+
T Consensus 96 ~~~l~ll~q~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~G~~~Fi~~~~L~~~~gyl~dD~l~I~~~V~v 165 (168)
T 1d00_A 96 KVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDL 165 (168)
T ss_dssp CEEEEECCTTSSCCEEEEECCCTTSGGGSCCSSSBCCCEEEEEEEETTTTTSSSSSSBTTEEEEEEEECC
T ss_pred EEEEEEECCCCCccceeccccCcchhhccCCCcCCCCCcCcceEeEHHHhcccCCceeCCEEEEEEEEEe
Confidence 99999999988653221100 112221 13444554 1 4788999999999743
No 29
>1flk_A TNF receptor associated factor 3; TNF signaling, TRAF3, CD40-binding protein, apoptosis; 2.80A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1fll_A
Probab=99.67 E-value=3.7e-17 Score=135.79 Aligned_cols=111 Identities=14% Similarity=0.067 Sum_probs=81.6
Q ss_pred eeeeeEEEEEeecC-------CC--CccccCCceec--ceeeEEEEEeCCe-----eEEEEeecCCCC----CCCCCceE
Q 038267 8 TISRLAQWRIDNFG-------PC--SYKKSDPFKIG--IWNWHLSVEKNRY-----LYVRLFPEPSRL----SKEQPPFA 67 (295)
Q Consensus 8 ~~~~~~~w~I~~~~-------~~--~~~~S~~F~~g--g~~W~l~~yp~g~-----~~vsl~l~~~~~----~~~~~v~a 67 (295)
+..|+|.|+|.||+ .| ..+.||+|.+| ||+|+|++||+|. .++||||.+.+. ...|++.|
T Consensus 73 ~~~g~~~wkI~nfS~~~~~~~~g~~~~i~S~~F~vg~~Gy~w~i~~yPnG~~~~~~~~lSlyL~l~~~~~d~~l~Wp~~a 152 (228)
T 1flk_A 73 SYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQ 152 (228)
T ss_dssp CSSSEEEEEEECHHHHHHHHHTTSCCCEECCCEESSTTSCEECEEEETTCCGGGTTTEEEEEECCBCCTTTTSSCSSCCC
T ss_pred CcCcEEEEEECCHHHHHHHhhcCCCeeEECceEEeCCCCcEEEEEEEcCCCCCCCCCEEEEEEEEecCCccccCCCcEEE
Confidence 57899999999985 23 37999999999 9999999999994 489999987532 23699999
Q ss_pred EEEEEEEeCCCCCeeeeee-----ccceec---c-cCCceeee-e---------eeeeeceeEEEeeeee
Q 038267 68 RFIIRVSNGGANRRLYISQ-----VNERLL---R-TCEDFVWY-V---------DCTIHGRFIVDVEFLE 118 (295)
Q Consensus 68 ~f~~~l~~~~~~~~~~~~~-----~~~~~~---~-~~~~~~w~-~---------~~~~~~~l~ve~~v~~ 118 (295)
+|+|+|+|+.+.+.+.... ....|. . ...+|||. | +|+.||+++|+|+|.+
T Consensus 153 ~~~l~lldq~~~~~~~~~~~~~~~~~~~F~rp~~~~~~~wG~~~Fi~~~~L~~~gyL~dD~l~I~~~V~v 222 (228)
T 1flk_A 153 KVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDT 222 (228)
T ss_dssp CEEEEECCCSSSCCCEEEEECCCTTCTTSSSCSSSBCCCCSEEEEEEHHHHSSSTTCCSSEEEEEEECCC
T ss_pred EEEEEEEcCCCCccceeeeecCCCccccccCCccCCCCCcCHHHeeEHHHHccCCCccCCEEEEEEEEEc
Confidence 9999999998776433221 111121 1 12344444 1 4788999999999754
No 30
>2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens}
Probab=99.58 E-value=5.7e-15 Score=137.55 Aligned_cols=111 Identities=13% Similarity=0.167 Sum_probs=83.8
Q ss_pred eeeeeEEEEEeecCCC-CccccCCceecceeeEEEEEeCCe------eEEEEeecCCC--CCCCCCceEEEEEEEEeCCC
Q 038267 8 TISRLAQWRIDNFGPC-SYKKSDPFKIGIWNWHLSVEKNRY------LYVRLFPEPSR--LSKEQPPFARFIIRVSNGGA 78 (295)
Q Consensus 8 ~~~~~~~w~I~~~~~~-~~~~S~~F~~gg~~W~l~~yp~g~------~~vsl~l~~~~--~~~~~~v~a~f~~~l~~~~~ 78 (295)
...++|+|+|+||+.. +.+.|++|.+||++|+|.+||+|+ +++|+||.+.+ .+.+|.+.|+|+|+|+|+++
T Consensus 28 ~~~~~~~w~I~nfS~~~~~~~S~~F~vgg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~~~~~~w~v~a~f~l~l~n~~~ 107 (522)
T 2f1z_A 28 RSEATFQFTVERFSRLSESVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAESDSTSWSCHAQAVLKIINYRD 107 (522)
T ss_dssp CSEEEEEEEESSCTTCCSCEECCCEEETTEEEEEEECBC--------CBBCEEEEESTTCCCSSCBEEEEEEEEECCTTC
T ss_pred cCCcEEEEEECChhhcCCceeCCCEEECCEeeEEEEEeCCCCCCCCCCeEEEEEEecCCCCCCCceEEEEEEEEEEcCCC
Confidence 4579999999999753 379999999999999999999872 37788776633 35579999999999999887
Q ss_pred CCeeeeeeccceecccCCceeee-e-----------eeeeeceeEEEeeeee
Q 038267 79 NRRLYISQVNERLLRTCEDFVWY-V-----------DCTIHGRFIVDVEFLE 118 (295)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~w~-~-----------~~~~~~~l~ve~~v~~ 118 (295)
+..+......++|.....+|||. + +|++||+++|+|+|.+
T Consensus 108 ~~~~~~~~~~~~F~~~~~~wG~~~Fi~~~~L~~~~~g~L~nD~l~i~~~V~v 159 (522)
T 2f1z_A 108 DEKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQA 159 (522)
T ss_dssp GGGCEEEECCEEECGGGCEEEESSSSBHHHHSCGGGSSCBTTBEEEEEEEEE
T ss_pred CccceeccceeEecCCCCCcchhheeEhhHhcCcccCcccCCcEEEEEEeec
Confidence 76554444444554444554543 1 4788999999999765
No 31
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.51 E-value=8.2e-14 Score=109.09 Aligned_cols=115 Identities=10% Similarity=0.131 Sum_probs=87.1
Q ss_pred EEEEe-CCeEEEeEeeeeccCCHHHHHhhcC-ccC-cCccceEEECCCCHHHHHHHHHHHhCCC--c-------------
Q 038267 163 TVIHT-ADGTLKAHKAVLSASSPVFQSMFHH-DLK-EKESSTIYIEDMSVESCMALLSYLYGTI--K------------- 224 (295)
Q Consensus 163 v~l~v-~~~~~~~hk~iLa~~S~~F~~~f~~-~~~-e~~~~~i~l~~~~~~~f~~~L~~lY~~~--~------------- 224 (295)
|+|+. +|+.|.+||.+ |..|++|++||.+ ++. |+.+..|+|+++++.+++.+++|+|+.. .
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~ 81 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 81 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------C
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccch
Confidence 67765 68899999999 8899999999987 666 7777899999999999999999999521 0
Q ss_pred ----------ccccHHHHHHHHHHHhhcChHHHHHHHHHHHHhcCC---hhhHHHHHHHHHHcCcHH
Q 038267 225 ----------QEDFWKHRLALLGAANKYDIADLKDACEESLLEDIN---SGNVLERLQEAWLYQLSK 278 (295)
Q Consensus 225 ----------~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~---~~~~~~~l~~A~~~~~~~ 278 (295)
..-..+++.+|+.||+++++..|.+.|++++...+. ++.+..++.+...+...+
T Consensus 82 ~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~eE 148 (159)
T 2ast_A 82 DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEE 148 (159)
T ss_dssp CCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCTTH
T ss_pred hhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHH
Confidence 112247899999999999999999999999977654 444555554444444333
No 32
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.29 E-value=5.9e-12 Score=89.97 Aligned_cols=79 Identities=16% Similarity=0.209 Sum_probs=61.3
Q ss_pred EEEEe-CCeEEEeEeeeeccCCHHHHHhhcC--ccCcCccceEEECCCCHHHHHHHHHHHh-----C----CCc---ccc
Q 038267 163 TVIHT-ADGTLKAHKAVLSASSPVFQSMFHH--DLKEKESSTIYIEDMSVESCMALLSYLY-----G----TIK---QED 227 (295)
Q Consensus 163 v~l~v-~~~~~~~hk~iLa~~S~~F~~~f~~--~~~e~~~~~i~l~~~~~~~f~~~L~~lY-----~----~~~---~~~ 227 (295)
|+|+. +|++|.+||.+ |..|++|++||.+ ++.|+..+.|+|+++++.+++.+++|+| + ++. ++.
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~~ 82 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 82 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCCG
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCCH
Confidence 45555 57799999999 9999999999986 6778888999999999999999999999 3 233 333
Q ss_pred cHHHHHHHHHHHhhcCh
Q 038267 228 FWKHRLALLGAANKYDI 244 (295)
Q Consensus 228 ~~~~~~~ll~~A~~~~~ 244 (295)
+++.+|+.||+++++
T Consensus 83 --~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 83 --EIALELLMAANFLDC 97 (97)
T ss_dssp --GGHHHHHHHHHHHTC
T ss_pred --HHHHHHHHHHhhhCC
Confidence 789999999999873
No 33
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.18 E-value=1.1e-10 Score=89.23 Aligned_cols=99 Identities=12% Similarity=0.096 Sum_probs=80.6
Q ss_pred EEEEe-CCeEEEeEeeeeccCCHHHHHhhcCccCcCccceEEECCCCHHHHHHHHHHHhCC--Cc---------------
Q 038267 163 TVIHT-ADGTLKAHKAVLSASSPVFQSMFHHDLKEKESSTIYIEDMSVESCMALLSYLYGT--IK--------------- 224 (295)
Q Consensus 163 v~l~v-~~~~~~~hk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~lY~~--~~--------------- 224 (295)
|+|.. +|+.|.+|+.+ |..|++++.||.+. . .+.|+|++++..+++.+++|+|.. ..
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~---~-~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~ 78 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDL---G-MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDD 78 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHT---C-CSSEECTTCCHHHHHHHHHHHHHHTTCC---------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhc---C-CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhh
Confidence 67776 67899999998 88999999999753 1 568999999999999999999841 11
Q ss_pred --------ccccHHHHHHHHHHHhhcChHHHHHHHHHHHHhcCChhhHHH
Q 038267 225 --------QEDFWKHRLALLGAANKYDIADLKDACEESLLEDINSGNVLE 266 (295)
Q Consensus 225 --------~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~~~~~ 266 (295)
..-..+++.+|+.||++++++.|.+.|++++...+...+.-+
T Consensus 79 i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~ee 128 (141)
T 1fs1_B 79 IPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEE 128 (141)
T ss_dssp --HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHH
T ss_pred hhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHH
Confidence 111237889999999999999999999999998776655544
No 34
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=99.06 E-value=2.2e-11 Score=95.22 Aligned_cols=110 Identities=14% Similarity=0.168 Sum_probs=61.6
Q ss_pred EEEEe-CCeEEEeEeeeeccCCHHHHHhhcCccCcCccceEEECCCCHHHHHHHHHHHhCCCc-----------------
Q 038267 163 TVIHT-ADGTLKAHKAVLSASSPVFQSMFHHDLKEKESSTIYIEDMSVESCMALLSYLYGTIK----------------- 224 (295)
Q Consensus 163 v~l~v-~~~~~~~hk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~lY~~~~----------------- 224 (295)
|+|.. +|+.|.+|+.+ |..|++|+.||.+.. ..+.|+|++|+..+++.+++|+|....
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~ 81 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC---VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDD 81 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC---------------CCTTSCHHHHHHHHHC-----------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC---CCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccccc
Confidence 66665 68899999998 889999999997642 345899999999999999999995310
Q ss_pred ---------ccccHHHHHHHHHHHhhcChHHHHHHHHHHHHhcC---ChhhHHHHHHHHHHcCc
Q 038267 225 ---------QEDFWKHRLALLGAANKYDIADLKDACEESLLEDI---NSGNVLERLQEAWLYQL 276 (295)
Q Consensus 225 ---------~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~---~~~~~~~~l~~A~~~~~ 276 (295)
..-..+++.+|+.||+++++..|.++|++++...+ +++.+..++.++..+.-
T Consensus 82 ~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t~ 145 (160)
T 2p1m_A 82 DLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTP 145 (160)
T ss_dssp -------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCCH
T ss_pred hhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCH
Confidence 01112678899999999999999999999999988 55566666555544443
No 35
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.64 E-value=6.9e-08 Score=68.79 Aligned_cols=81 Identities=17% Similarity=0.192 Sum_probs=64.6
Q ss_pred cEEEEe-CCeEEEeEeeeeccCCHHHHHhhcCccCcCccceEEECCCCHHHHHHHHHHHhCCC----------c---ccc
Q 038267 162 DTVIHT-ADGTLKAHKAVLSASSPVFQSMFHHDLKEKESSTIYIEDMSVESCMALLSYLYGTI----------K---QED 227 (295)
Q Consensus 162 Dv~l~v-~~~~~~~hk~iLa~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~lY~~~----------~---~~~ 227 (295)
-|+|.. +|+.|.+++.+ |..|..++.|+.+++ +...+.|+|++++...++.+++|+|... . ..-
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~v 82 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFEI 82 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCccC
Confidence 367766 77899999997 889999999998766 5666799999999999999999998410 0 011
Q ss_pred cHHHHHHHHHHHhhcCh
Q 038267 228 FWKHRLALLGAANKYDI 244 (295)
Q Consensus 228 ~~~~~~~ll~~A~~~~~ 244 (295)
..+.+.+|+.||+++++
T Consensus 83 d~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 83 PTEMSLELLLAADYLSI 99 (99)
T ss_dssp CHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 23678899999998874
No 36
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.56 E-value=6.2e-08 Score=68.64 Aligned_cols=79 Identities=15% Similarity=0.194 Sum_probs=58.9
Q ss_pred EEEEe-CCeEEEeEeeeeccCCHHHHHhhcC--ccCcCccceEEECCCCHHHHHHHHHHHhCCC------------cccc
Q 038267 163 TVIHT-ADGTLKAHKAVLSASSPVFQSMFHH--DLKEKESSTIYIEDMSVESCMALLSYLYGTI------------KQED 227 (295)
Q Consensus 163 v~l~v-~~~~~~~hk~iLa~~S~~F~~~f~~--~~~e~~~~~i~l~~~~~~~f~~~L~~lY~~~------------~~~~ 227 (295)
|+|+. +|+.|.+++.+ |..|+.++.|+.+ .+.|+..+.|+|++++...++.+++|+|... ..+.
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~ 81 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 81 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCCT
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcccCH
Confidence 56665 67899999996 8899999999975 3356667899999999999999999998411 1122
Q ss_pred cHHHHHHHHHHHhhcCh
Q 038267 228 FWKHRLALLGAANKYDI 244 (295)
Q Consensus 228 ~~~~~~~ll~~A~~~~~ 244 (295)
+.+.+|+.||+++++
T Consensus 82 --~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 82 --EIALELLMAANFLDC 96 (96)
T ss_dssp --TTHHHHHHHHHHHTC
T ss_pred --HHHHHHHHHHHHhCc
Confidence 578899999998864
No 37
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.52 E-value=5.4e-07 Score=70.69 Aligned_cols=108 Identities=11% Similarity=0.124 Sum_probs=78.2
Q ss_pred cEEEEe-CCeEEEeEeeeeccCCHHHHHhhcCccC----cCccceEEECCCCHHHHHHHHHHHhC--CCc-c--------
Q 038267 162 DTVIHT-ADGTLKAHKAVLSASSPVFQSMFHHDLK----EKESSTIYIEDMSVESCMALLSYLYG--TIK-Q-------- 225 (295)
Q Consensus 162 Dv~l~v-~~~~~~~hk~iLa~~S~~F~~~f~~~~~----e~~~~~i~l~~~~~~~f~~~L~~lY~--~~~-~-------- 225 (295)
-|+|+. +|+.|.+++.+ |.+|..++.|+..... +.....|+|++|+..+++.+++|++. +.. +
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~~ 86 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSR 86 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC-------
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccccccccc
Confidence 467765 56799999997 7799999999965322 13347899999999999999999973 111 0
Q ss_pred -------------cccHHHHHHHHHHHhhcChHHHHHHHHHHHHhcCC---hhhHHHHHHH
Q 038267 226 -------------EDFWKHRLALLGAANKYDIADLKDACEESLLEDIN---SGNVLERLQE 270 (295)
Q Consensus 226 -------------~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~---~~~~~~~l~~ 270 (295)
.-....+.+|+.||+++++..|.++|++.+...+. ++.+..++.+
T Consensus 87 ~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I 147 (169)
T 3v7d_A 87 KSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNI 147 (169)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTC
T ss_pred ccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCC
Confidence 01136789999999999999999999998866444 4444444443
No 38
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.46 E-value=8.4e-07 Score=64.15 Aligned_cols=94 Identities=15% Similarity=0.176 Sum_probs=72.2
Q ss_pred cEEEEeCCeEEEeEeeeeccCC-HHHHHhhcCccC----cCccceEEECCCCHHHHHHHHHHHhCC-CcccccHHHHHHH
Q 038267 162 DTVIHTADGTLKAHKAVLSASS-PVFQSMFHHDLK----EKESSTIYIEDMSVESCMALLSYLYGT-IKQEDFWKHRLAL 235 (295)
Q Consensus 162 Dv~l~v~~~~~~~hk~iLa~~S-~~F~~~f~~~~~----e~~~~~i~l~~~~~~~f~~~L~~lY~~-~~~~~~~~~~~~l 235 (295)
-|+|.|||..|...+..|+... .+|.+||.++.. ....+++-+ |-+|..|+.+|+|+.++ +..... -....+
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~-~~~~~l 84 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKD-LAEEGV 84 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTT-SCHHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCC-CCHHHH
Confidence 4789999999999999999775 478899876421 113445655 78999999999999964 322221 124678
Q ss_pred HHHHhhcChHHHHHHHHHHHHh
Q 038267 236 LGAANKYDIADLKDACEESLLE 257 (295)
Q Consensus 236 l~~A~~~~~~~l~~~c~~~l~~ 257 (295)
++-|+.|+++.|.+.|++.|.+
T Consensus 85 ~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 85 LEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHhc
Confidence 9999999999999999998764
No 39
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=98.15 E-value=2.6e-06 Score=61.86 Aligned_cols=82 Identities=15% Similarity=0.112 Sum_probs=59.6
Q ss_pred cEEEE-eCCeEEEeEeeeeccCCHHHHHhhcC--ccCcCccceEEECCCCHHHHHHHHHHHhCC----C---c---cccc
Q 038267 162 DTVIH-TADGTLKAHKAVLSASSPVFQSMFHH--DLKEKESSTIYIEDMSVESCMALLSYLYGT----I---K---QEDF 228 (295)
Q Consensus 162 Dv~l~-v~~~~~~~hk~iLa~~S~~F~~~f~~--~~~e~~~~~i~l~~~~~~~f~~~L~~lY~~----~---~---~~~~ 228 (295)
-|+|+ .+|+.|.+++. .|..|..++.|+.. .+.|...+.|+|++|+..+++.+++|++.. . . ..-.
T Consensus 18 ~v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~vd 96 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 96 (112)
T ss_dssp EEEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCCC
T ss_pred EEEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCcccC
Confidence 46776 46779999999 56799999999974 334555679999999999999999999731 0 0 1112
Q ss_pred HHHHHHHHHHHhhcCh
Q 038267 229 WKHRLALLGAANKYDI 244 (295)
Q Consensus 229 ~~~~~~ll~~A~~~~~ 244 (295)
.+.+.+|+.||+++++
T Consensus 97 ~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 97 PEIALELLMAANFLDC 112 (112)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 3788999999999874
No 40
>4gwm_A Meprin A subunit beta; mulidomain structure, hydrolase; HET: NAG BMA FUC MAN; 1.85A {Homo sapiens} PDB: 4gwn_A*
Probab=97.57 E-value=0.00038 Score=64.77 Aligned_cols=69 Identities=13% Similarity=0.162 Sum_probs=54.3
Q ss_pred eeEEEEEeecC-----CCCccccCCcee-cceeeEEEEEeCCeeEEEEeecCCCC----CCCCCce-EEEEEEEEeCCCC
Q 038267 11 RLAQWRIDNFG-----PCSYKKSDPFKI-GIWNWHLSVEKNRYLYVRLFPEPSRL----SKEQPPF-ARFIIRVSNGGAN 79 (295)
Q Consensus 11 ~~~~w~I~~~~-----~~~~~~S~~F~~-gg~~W~l~~yp~g~~~vsl~l~~~~~----~~~~~v~-a~f~~~l~~~~~~ 79 (295)
..+.|+|.||+ .+..+.||+|.. .||.++|.+|+++..+++||..+.+. .-.|++. -++++.|++|+..
T Consensus 406 P~~vw~i~nfs~~l~~~~~~~~Sp~Fys~~GY~~~v~l~~~~~~~~~~~~~l~sG~~D~~L~WP~~~~q~t~~llDQ~pd 485 (592)
T 4gwm_A 406 PHHIWHIRNFTQFIGSPNGTLYSPPFYSSKGYAFQIYLNLAHVTNAGIYFHLISGANDDQLQWPCPWQQATMTLLDQNPD 485 (592)
T ss_dssp CSEEEEECSCGGGTTCTTCEEECCCEECTTSCEEEEEEECCSSSEEEEEEEEECCTTGGGSCSSCCSEEEEEEECCCCSS
T ss_pred CCCceeecCHHHhhcCCCCceeCCCccCCCCeEEEEEEecCCCceEEEEEEEecCCCCCCccCCCCCCEEEEEEeCCCCC
Confidence 47999999984 466799999974 59999999999887777777766442 3458874 6799999999744
No 41
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.52 E-value=0.00021 Score=56.85 Aligned_cols=95 Identities=15% Similarity=0.174 Sum_probs=71.0
Q ss_pred cEEEEeCCeEEEeEeeeeccCC-HHHHHhhcCcc--C--cCccceEEECCCCHHHHHHHHHHHhCC-CcccccHHHHHHH
Q 038267 162 DTVIHTADGTLKAHKAVLSASS-PVFQSMFHHDL--K--EKESSTIYIEDMSVESCMALLSYLYGT-IKQEDFWKHRLAL 235 (295)
Q Consensus 162 Dv~l~v~~~~~~~hk~iLa~~S-~~F~~~f~~~~--~--e~~~~~i~l~~~~~~~f~~~L~~lY~~-~~~~~~~~~~~~l 235 (295)
=|+|.|||..|...+..|.... .+|..||.+.. . ....+++-| |=+|..|+.+|+|+.++ +..... -....+
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~-~~~~~l 90 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKD-LAEEGV 90 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTT-SCHHHH
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCC-CCHHHH
Confidence 4778999999999999998764 47888987542 1 112345555 67999999999999864 332221 123579
Q ss_pred HHHHhhcChHHHHHHHHHHHHhc
Q 038267 236 LGAANKYDIADLKDACEESLLED 258 (295)
Q Consensus 236 l~~A~~~~~~~l~~~c~~~l~~~ 258 (295)
+.-|++|+++.|.+.|++.|.+.
T Consensus 91 ~eEA~FygL~~Lv~~l~~~i~er 113 (202)
T 3drx_A 91 LEEAEFYNITSLIKLVKDKIRER 113 (202)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCcHHHHHHHHHHHHHH
Confidence 99999999999999999988753
No 42
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.86 E-value=0.00063 Score=48.64 Aligned_cols=39 Identities=13% Similarity=0.034 Sum_probs=33.0
Q ss_pred HhcCChhhHHHHHHHHHHcCcHHHHHHHHHHHHh-hcccc
Q 038267 256 LEDINSGNVLERLQEAWLYQLSKLKKGCLTYLFD-FGKIY 294 (295)
Q Consensus 256 ~~~~~~~~~~~~l~~A~~~~~~~L~~~~~~~i~~-~~~i~ 294 (295)
.+.++++||+.++.+|+.|++..|++.|.+||.+ |.+|.
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~ 44 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQ 44 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHH
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 3467889999999999999999999999999988 77653
No 43
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=95.78 E-value=0.0019 Score=46.87 Aligned_cols=95 Identities=8% Similarity=0.053 Sum_probs=64.4
Q ss_pred cEEEEeCCeEEEeEeeeeccCC-HHHHHhhcCcc-CcCccceEEECCCCHHHHHHHHHHHhCC-CcccccHHHHHHHHHH
Q 038267 162 DTVIHTADGTLKAHKAVLSASS-PVFQSMFHHDL-KEKESSTIYIEDMSVESCMALLSYLYGT-IKQEDFWKHRLALLGA 238 (295)
Q Consensus 162 Dv~l~v~~~~~~~hk~iLa~~S-~~F~~~f~~~~-~e~~~~~i~l~~~~~~~f~~~L~~lY~~-~~~~~~~~~~~~ll~~ 238 (295)
=|+|.|||..|...+..|.... ..+.+|+.+.. .....+++-+ |=+|..|+.+|.|+.++ +..... -....++.-
T Consensus 6 ~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~-~~~~~~~~E 83 (115)
T 3kvt_A 6 RVIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTD-VCGPLFEEE 83 (115)
T ss_dssp EEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSS-SCHHHHHHH
T ss_pred EEEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCc-ccHHHHHHH
Confidence 4789999999999999998663 24556665421 1223456655 68999999999999864 322221 235688999
Q ss_pred HhhcChHHHHHH--HHHHHHhc
Q 038267 239 ANKYDIADLKDA--CEESLLED 258 (295)
Q Consensus 239 A~~~~~~~l~~~--c~~~l~~~ 258 (295)
|+.|+++...-. |...+.+.
T Consensus 84 a~fy~i~~~~l~~CC~~~~~~~ 105 (115)
T 3kvt_A 84 LEFWGLDSNQVEPCCWMTYTAH 105 (115)
T ss_dssp HHHHTCCGGGBCGGGSHHHHSC
T ss_pred HHHhCCChHHHHHHHHHHHHhc
Confidence 999999875433 44444443
No 44
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=95.02 E-value=0.022 Score=41.72 Aligned_cols=90 Identities=11% Similarity=0.182 Sum_probs=60.5
Q ss_pred ccEEEEeCCeEEEeEeeeeccCCHHHHHhhcCc----cCcCccceEEECCCCHHHHHHHHHHHhCC-CcccccHHHHHHH
Q 038267 161 ADTVIHTADGTLKAHKAVLSASSPVFQSMFHHD----LKEKESSTIYIEDMSVESCMALLSYLYGT-IKQEDFWKHRLAL 235 (295)
Q Consensus 161 ~Dv~l~v~~~~~~~hk~iLa~~S~~F~~~f~~~----~~e~~~~~i~l~~~~~~~f~~~L~~lY~~-~~~~~~~~~~~~l 235 (295)
.=|+|.|||..|...+..|..... +||... ......+++-+ |=++..|+.+|.|+.++ +..... ..+..+
T Consensus 13 ~~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~-~~~~~l 87 (124)
T 1s1g_A 13 ELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRY-ECISAY 87 (124)
T ss_dssp CEEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTT-SCHHHH
T ss_pred CEEEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCC-cCHHHH
Confidence 358899999999999999975432 334321 11223456655 56999999999999864 322221 236789
Q ss_pred HHHHhhcChHHHH-HH-HHHHH
Q 038267 236 LGAANKYDIADLK-DA-CEESL 255 (295)
Q Consensus 236 l~~A~~~~~~~l~-~~-c~~~l 255 (295)
+.-|+.|+++.+. .. |...+
T Consensus 88 ~~Ea~fy~i~~l~l~~cC~~~~ 109 (124)
T 1s1g_A 88 DDELAFYGILPEIIGDCCYEEY 109 (124)
T ss_dssp HHHHHHTTCCGGGBCHHHHHHH
T ss_pred HHHHHHcCCChHHHHHHHHHHH
Confidence 9999999999873 44 44433
No 45
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=94.31 E-value=0.016 Score=41.25 Aligned_cols=80 Identities=8% Similarity=0.103 Sum_probs=55.2
Q ss_pred EEEEeCCeEEEeEeeeeccCCHHHHHhhcCcc----CcCccceEEECCCCHHHHHHHHHHHhCC-CcccccHHHHHHHHH
Q 038267 163 TVIHTADGTLKAHKAVLSASSPVFQSMFHHDL----KEKESSTIYIEDMSVESCMALLSYLYGT-IKQEDFWKHRLALLG 237 (295)
Q Consensus 163 v~l~v~~~~~~~hk~iLa~~S~~F~~~f~~~~----~e~~~~~i~l~~~~~~~f~~~L~~lY~~-~~~~~~~~~~~~ll~ 237 (295)
|+|.|||..|...+..|..... +||.... .....+++-+ |=+|..|+.+|.|+-++ +..... ..+..++.
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~-~~~~~l~~ 76 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRH-ECISAYDE 76 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTT-SCHHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCC-cCHHHHHH
Confidence 6899999999999999875532 3333211 1123345555 56999999999999864 322221 23678999
Q ss_pred HHhhcChHHH
Q 038267 238 AANKYDIADL 247 (295)
Q Consensus 238 ~A~~~~~~~l 247 (295)
-|+.|+++.+
T Consensus 77 Ea~fy~i~~l 86 (105)
T 1nn7_A 77 ELAFFGLIPE 86 (105)
T ss_dssp HHHHHTCCSC
T ss_pred HHHHcCCCHH
Confidence 9999999876
No 46
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=94.29 E-value=0.019 Score=40.34 Aligned_cols=84 Identities=10% Similarity=0.091 Sum_probs=57.1
Q ss_pred EEEEeCCeEEEeEeeeeccCCH-HHHHhhcC-ccCcCccceEEECCCCHHHHHHHHHHHhC-C-CcccccHHHHHHHHHH
Q 038267 163 TVIHTADGTLKAHKAVLSASSP-VFQSMFHH-DLKEKESSTIYIEDMSVESCMALLSYLYG-T-IKQEDFWKHRLALLGA 238 (295)
Q Consensus 163 v~l~v~~~~~~~hk~iLa~~S~-~F~~~f~~-~~~e~~~~~i~l~~~~~~~f~~~L~~lY~-~-~~~~~~~~~~~~ll~~ 238 (295)
|+|.|||..|...+..|...-. .+.+|+.. .......+++-+ |=+|..|+.+|.|+.+ + +..... ..+..++.-
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~-~~~~~~~~E 80 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVN-VPLDVFSEE 80 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTT-SCHHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCC-CCHHHHHHH
Confidence 6899999999999999965421 23333321 111224456665 6799999999999986 4 322221 236789999
Q ss_pred HhhcChHHHH
Q 038267 239 ANKYDIADLK 248 (295)
Q Consensus 239 A~~~~~~~l~ 248 (295)
|+.|+++.+.
T Consensus 81 a~fy~i~~~~ 90 (100)
T 1t1d_A 81 IKFYELGENA 90 (100)
T ss_dssp HHHTTCCHHH
T ss_pred HHHcCCCHHH
Confidence 9999998754
No 47
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=93.80 E-value=0.044 Score=41.02 Aligned_cols=83 Identities=10% Similarity=0.127 Sum_probs=57.4
Q ss_pred cccEEEEeCCeEEEeEeeeeccCCHHHHHhhcCcc----CcCccceEEECCCCHHHHHHHHHHHhCC-CcccccHHHHHH
Q 038267 160 LADTVIHTADGTLKAHKAVLSASSPVFQSMFHHDL----KEKESSTIYIEDMSVESCMALLSYLYGT-IKQEDFWKHRLA 234 (295)
Q Consensus 160 ~~Dv~l~v~~~~~~~hk~iLa~~S~~F~~~f~~~~----~e~~~~~i~l~~~~~~~f~~~L~~lY~~-~~~~~~~~~~~~ 234 (295)
..-|+|.|||..|...+..|.... .+||.... .....+++-+ |=++..|+.+|+|+-++ +..... ..+..
T Consensus 34 ~~~V~LNVGG~~F~T~~~TL~~~P---~S~L~~~~~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~-~~~~~ 108 (140)
T 2nz0_B 34 DELIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRY-ECISA 108 (140)
T ss_dssp CCEEEEEETTEEEEEEHHHHHTCT---TSTTTSGGGGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTT-SCHHH
T ss_pred CCEEEEEECCEEEEeeHHHHhcCC---CeeecccCCcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCC-cCHHH
Confidence 345889999999999999997543 23443311 1123345555 56999999999999864 322221 23678
Q ss_pred HHHHHhhcChHHH
Q 038267 235 LLGAANKYDIADL 247 (295)
Q Consensus 235 ll~~A~~~~~~~l 247 (295)
++.-|++|+++.+
T Consensus 109 l~eEa~fy~i~~l 121 (140)
T 2nz0_B 109 YDDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHHTCCGG
T ss_pred HHHHHHHcCCChH
Confidence 9999999999987
No 48
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=89.45 E-value=0.47 Score=33.25 Aligned_cols=31 Identities=29% Similarity=0.492 Sum_probs=29.0
Q ss_pred CChhhHHHHHHHHHHcCcHHHHHHHHHHHHh
Q 038267 259 INSGNVLERLQEAWLYQLSKLKKGCLTYLFD 289 (295)
Q Consensus 259 ~~~~~~~~~l~~A~~~~~~~L~~~~~~~i~~ 289 (295)
++.+++..++..|++|+++.|++.|.+||.+
T Consensus 77 ~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~ 107 (109)
T 2vkp_A 77 LEADTVLATLYAAKKYIVPALAKACVNFLET 107 (109)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 6678999999999999999999999999976
No 49
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=86.15 E-value=1.9 Score=30.45 Aligned_cols=31 Identities=26% Similarity=0.234 Sum_probs=28.0
Q ss_pred CChhhHHHHHHHHHHcCcHHHHHHHHHHHHh
Q 038267 259 INSGNVLERLQEAWLYQLSKLKKGCLTYLFD 289 (295)
Q Consensus 259 ~~~~~~~~~l~~A~~~~~~~L~~~~~~~i~~ 289 (295)
++.+|+..++..|++++.+.|++.|.+||.+
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (116)
T 2vpk_A 86 LDSWNVKEIHQAADYLKVEEVVTKCKIKMED 116 (116)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 5678999999999999999999999999863
No 50
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=84.27 E-value=1.2 Score=31.87 Aligned_cols=30 Identities=20% Similarity=0.255 Sum_probs=28.0
Q ss_pred CChhhHHHHHHHHHHcCcHHHHHHHHHHHH
Q 038267 259 INSGNVLERLQEAWLYQLSKLKKGCLTYLF 288 (295)
Q Consensus 259 ~~~~~~~~~l~~A~~~~~~~L~~~~~~~i~ 288 (295)
++.+|+.+++..|++++.+.|++.|.+||.
T Consensus 88 i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 88 LSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 677899999999999999999999999985
No 51
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=84.25 E-value=3 Score=29.93 Aligned_cols=31 Identities=16% Similarity=0.442 Sum_probs=28.9
Q ss_pred CChhhHHHHHHHHHHcCcHHHHHHHHHHHHh
Q 038267 259 INSGNVLERLQEAWLYQLSKLKKGCLTYLFD 289 (295)
Q Consensus 259 ~~~~~~~~~l~~A~~~~~~~L~~~~~~~i~~ 289 (295)
++.+++..++..|+.++.+.|++.|.+||.+
T Consensus 95 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 95 LREGNIMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 5678999999999999999999999999975
No 52
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=83.85 E-value=3.4 Score=29.37 Aligned_cols=31 Identities=19% Similarity=0.297 Sum_probs=28.9
Q ss_pred CChhhHHHHHHHHHHcCcHHHHHHHHHHHHh
Q 038267 259 INSGNVLERLQEAWLYQLSKLKKGCLTYLFD 289 (295)
Q Consensus 259 ~~~~~~~~~l~~A~~~~~~~L~~~~~~~i~~ 289 (295)
++.+|+.+++..|++++.+.|++.|.+||.+
T Consensus 89 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 89 AKAEDLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp CCGGGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 5678999999999999999999999999976
No 53
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=82.11 E-value=0.86 Score=32.58 Aligned_cols=31 Identities=19% Similarity=0.216 Sum_probs=27.4
Q ss_pred CChhhHHHHHHHHHHcCcHHHHHHHHHHHHh
Q 038267 259 INSGNVLERLQEAWLYQLSKLKKGCLTYLFD 289 (295)
Q Consensus 259 ~~~~~~~~~l~~A~~~~~~~L~~~~~~~i~~ 289 (295)
++.+|+.+++..|+.++.+.|++.|.+|+.+
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 86 LTSGNRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred cCHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 6678999999999999999999999999875
No 54
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=82.01 E-value=1.8 Score=30.73 Aligned_cols=29 Identities=24% Similarity=0.416 Sum_probs=27.2
Q ss_pred CChhhHHHHHHHHHHcCcHHHHHHHHHHH
Q 038267 259 INSGNVLERLQEAWLYQLSKLKKGCLTYL 287 (295)
Q Consensus 259 ~~~~~~~~~l~~A~~~~~~~L~~~~~~~i 287 (295)
++.+++..++..|++|+.+.|++.|.+||
T Consensus 91 ~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 91 VSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 56789999999999999999999999987
No 55
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.98 E-value=1.3 Score=31.08 Aligned_cols=29 Identities=14% Similarity=0.110 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhhcChHHHHHHHHHHHHhc
Q 038267 230 KHRLALLGAANKYDIADLKDACEESLLED 258 (295)
Q Consensus 230 ~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 258 (295)
+|...++.+|+.|++++|+..|.+|+..+
T Consensus 11 ~NCl~i~~~A~~~~~~~L~~~a~~fi~~n 39 (105)
T 2eqx_A 11 GNCLQVMWLADRHSDPELYTAAKHCAKTH 39 (105)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 67999999999999999999999998875
No 56
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=80.58 E-value=2.2 Score=31.19 Aligned_cols=31 Identities=19% Similarity=0.205 Sum_probs=28.4
Q ss_pred CChhhHHHHHHHHHHcCcHHHHHHHHHHHHh
Q 038267 259 INSGNVLERLQEAWLYQLSKLKKGCLTYLFD 289 (295)
Q Consensus 259 ~~~~~~~~~l~~A~~~~~~~L~~~~~~~i~~ 289 (295)
++.+|+.+++..|+.|+...|++.|.+||.+
T Consensus 87 i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~ 117 (135)
T 2yy9_A 87 LTSGNRDQVLLAAKELRVPEAVELCQSFQPQ 117 (135)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCCC-
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 6788999999999999999999999999977
No 57
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=78.94 E-value=0.94 Score=33.36 Aligned_cols=31 Identities=16% Similarity=0.286 Sum_probs=29.2
Q ss_pred CChhhHHHHHHHHHHcCcHHHHHHHHHHHHh
Q 038267 259 INSGNVLERLQEAWLYQLSKLKKGCLTYLFD 289 (295)
Q Consensus 259 ~~~~~~~~~l~~A~~~~~~~L~~~~~~~i~~ 289 (295)
++.+|+..++..|+.++.+.|++.|.+||.+
T Consensus 101 i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 131 (138)
T 2z8h_A 101 LSKDNVDEVCRCVEFLSVHNIEESCFQFLKF 131 (138)
T ss_dssp CCTTTHHHHHHHHHHHTCGGGHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 6788999999999999999999999999987
No 58
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=77.21 E-value=4.8 Score=30.39 Aligned_cols=31 Identities=13% Similarity=0.056 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhhcChHHHHHHHHHHHHhcCC
Q 038267 230 KHRLALLGAANKYDIADLKDACEESLLEDIN 260 (295)
Q Consensus 230 ~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~ 260 (295)
+++..++.+|++|+++.|+..|.+++.+++.
T Consensus 135 ~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~ 165 (172)
T 3htm_A 135 ENAAEILILADLHSADQLKTQAVDFINYHAT 165 (172)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 5689999999999999999999999998744
No 59
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=75.63 E-value=1.6 Score=32.47 Aligned_cols=29 Identities=31% Similarity=0.479 Sum_probs=27.0
Q ss_pred CChhhHHHHHHHHHHcCcHHHHHHHHHHH
Q 038267 259 INSGNVLERLQEAWLYQLSKLKKGCLTYL 287 (295)
Q Consensus 259 ~~~~~~~~~l~~A~~~~~~~L~~~~~~~i 287 (295)
++.+++..++..|++|+.+.|++.|.+||
T Consensus 115 i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 115 LNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 56789999999999999999999999886
No 60
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=71.21 E-value=3.3 Score=29.56 Aligned_cols=31 Identities=16% Similarity=0.235 Sum_probs=27.2
Q ss_pred CChhhHHHHHHHHHHcCcHHHHHHHHHHHHh
Q 038267 259 INSGNVLERLQEAWLYQLSKLKKGCLTYLFD 289 (295)
Q Consensus 259 ~~~~~~~~~l~~A~~~~~~~L~~~~~~~i~~ 289 (295)
++.+|+..++..|+.++...|++.|.+++..
T Consensus 87 i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 87 LQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp ECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 6788999999999999999999999998753
No 61
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=69.32 E-value=4.1 Score=37.27 Aligned_cols=85 Identities=11% Similarity=0.050 Sum_probs=55.5
Q ss_pred cEEEEeCCeEEEeEeeeeccCCHH-HHHhhc-CccCcCccceEEECCCCHHHHHHHHHHHhC-CC-cccccHHHHHHHHH
Q 038267 162 DTVIHTADGTLKAHKAVLSASSPV-FQSMFH-HDLKEKESSTIYIEDMSVESCMALLSYLYG-TI-KQEDFWKHRLALLG 237 (295)
Q Consensus 162 Dv~l~v~~~~~~~hk~iLa~~S~~-F~~~f~-~~~~e~~~~~i~l~~~~~~~f~~~L~~lY~-~~-~~~~~~~~~~~ll~ 237 (295)
-|+|.|||..|...+..|...-.- +..++. ........++.-+ |=+|..|+.+|.|+.+ +. ..... -....+++
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~-~~~~~~~~ 130 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVN-VPLDIFSE 130 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTT-SCHHHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCc-ccHHHHHH
Confidence 477899999999999998754221 111111 0111234456665 7799999999999996 52 22221 23457888
Q ss_pred HHhhcChHHHH
Q 038267 238 AANKYDIADLK 248 (295)
Q Consensus 238 ~A~~~~~~~l~ 248 (295)
=|+.|+++.+.
T Consensus 131 E~~f~~i~~~~ 141 (514)
T 2r9r_B 131 EIRFYELGEEA 141 (514)
T ss_dssp HHHHTTCCHHH
T ss_pred HHHhcCCCHHH
Confidence 89999998754
No 62
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=68.36 E-value=11 Score=31.58 Aligned_cols=31 Identities=13% Similarity=0.056 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhhcChHHHHHHHHHHHHhcCC
Q 038267 230 KHRLALLGAANKYDIADLKDACEESLLEDIN 260 (295)
Q Consensus 230 ~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~ 260 (295)
+++..++.+|++|+++.|+..|.++|..++.
T Consensus 275 ~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~ 305 (312)
T 3hqi_A 275 ENAAEILILADLHSADQLKTQAVDFINYHAT 305 (312)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999998643
No 63
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=67.53 E-value=4.5 Score=19.46 Aligned_cols=22 Identities=18% Similarity=0.125 Sum_probs=18.2
Q ss_pred HHHHHHHHcCcHHHHHHHHHHH
Q 038267 266 ERLQEAWLYQLSKLKKGCLTYL 287 (295)
Q Consensus 266 ~~l~~A~~~~~~~L~~~~~~~i 287 (295)
..+-.|.+++.++|.+.|++-.
T Consensus 3 kvmcyaqrhsspellrrcldnc 24 (26)
T 2plx_B 3 KVMCYAQRHSSPELLRRCLDNC 24 (26)
T ss_dssp HHHHHHBCCCCHHHHHHHHHHH
T ss_pred eEEeehhhcCCHHHHHHHHhcc
Confidence 4567889999999999998754
No 64
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=66.22 E-value=0.99 Score=32.76 Aligned_cols=32 Identities=13% Similarity=0.211 Sum_probs=23.4
Q ss_pred cCChhhHHHHHHHHHHcCcHHHHHHHHHHHHh
Q 038267 258 DINSGNVLERLQEAWLYQLSKLKKGCLTYLFD 289 (295)
Q Consensus 258 ~~~~~~~~~~l~~A~~~~~~~L~~~~~~~i~~ 289 (295)
.++.+|+..++..|+.++.+.|++.|.+||.+
T Consensus 95 ~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 95 SMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp ECCTTTHHHHHHHHHHTTBTTSSCC-------
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 46788999999999999999999999999986
No 65
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=64.15 E-value=3.7 Score=30.02 Aligned_cols=31 Identities=26% Similarity=0.148 Sum_probs=25.9
Q ss_pred CChhhHHHHHHHHHHcCcHHHHHHHHHHHHh
Q 038267 259 INSGNVLERLQEAWLYQLSKLKKGCLTYLFD 289 (295)
Q Consensus 259 ~~~~~~~~~l~~A~~~~~~~L~~~~~~~i~~ 289 (295)
++.+++..++..|++|..+.|++.|.++|.+
T Consensus 91 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~ 121 (145)
T 4eoz_A 91 NLDKMADDLLAAADKYALERLKVMCEDALCS 121 (145)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHCC---
T ss_pred CcHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999976
No 66
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=54.25 E-value=12 Score=30.36 Aligned_cols=31 Identities=29% Similarity=0.408 Sum_probs=28.4
Q ss_pred CChhhHHHHHHHHHHcCcHHHHHHHHHHHHh
Q 038267 259 INSGNVLERLQEAWLYQLSKLKKGCLTYLFD 289 (295)
Q Consensus 259 ~~~~~~~~~l~~A~~~~~~~L~~~~~~~i~~ 289 (295)
++.+++..++..|..++.+.|++.|.+|+.+
T Consensus 99 i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~ 129 (256)
T 3hve_A 99 LNEDTIQDVVQAADLLLLTDLKTLCCEFLEG 129 (256)
T ss_dssp CC-CCHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred ccHhHHHHHHHHHHHHChHHHHHHHHHHHHh
Confidence 6788999999999999999999999999986
No 67
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=49.67 E-value=13 Score=30.69 Aligned_cols=31 Identities=32% Similarity=0.419 Sum_probs=29.0
Q ss_pred CChhhHHHHHHHHHHcCcHHHHHHHHHHHHh
Q 038267 259 INSGNVLERLQEAWLYQLSKLKKGCLTYLFD 289 (295)
Q Consensus 259 ~~~~~~~~~l~~A~~~~~~~L~~~~~~~i~~ 289 (295)
++.+++..++..|+.++.+.|++.|.+|+.+
T Consensus 107 i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~ 137 (279)
T 3i3n_A 107 VSTGSVHEVLELADRFLLIRLKEFCGEFLKK 137 (279)
T ss_dssp EETTTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHCcHHHHHHHHHHHHH
Confidence 5678999999999999999999999999987
No 68
>3v0r_A Major allergen ALT A 1; beta-barrel, cell WALL, unknown function; HET: 0FU 8AC; 1.90A {Alternaria alternata}
Probab=49.00 E-value=5.3 Score=28.90 Aligned_cols=30 Identities=30% Similarity=0.323 Sum_probs=23.3
Q ss_pred cccceeeeeEEEEEeecC----CCCccccCCcee
Q 038267 4 SRVETISRLAQWRIDNFG----PCSYKKSDPFKI 33 (295)
Q Consensus 4 ~~~~~~~~~~~w~I~~~~----~~~~~~S~~F~~ 33 (295)
|..-+++|-+.|+|.+|. .|..+.|=.|.+
T Consensus 5 ~cpv~~~gd~vwkIs~F~~RKpeGty~nsvsFnI 38 (133)
T 3v0r_A 5 SCPVTTEGDYVWKISEFYGRKPEGTYYNSLGFNI 38 (133)
T ss_dssp CSSSCCCCTTEEEEEEEEEEETTSSSCSEEEEEE
T ss_pred CCccccCCceEEEeeeeeeEcCCCCceeeEEEEE
Confidence 466778899999999994 577788877743
No 69
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=47.02 E-value=1 Score=32.40 Aligned_cols=30 Identities=17% Similarity=0.336 Sum_probs=26.7
Q ss_pred CChhhHHHHHHHHHHcCcHHHHHHHHHHHH
Q 038267 259 INSGNVLERLQEAWLYQLSKLKKGCLTYLF 288 (295)
Q Consensus 259 ~~~~~~~~~l~~A~~~~~~~L~~~~~~~i~ 288 (295)
++.+|+..++..|+.++.+.|++.|.+||.
T Consensus 94 i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 94 LSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp EETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred cCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 567899999999999999999999998864
No 70
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=42.62 E-value=44 Score=24.92 Aligned_cols=38 Identities=16% Similarity=0.157 Sum_probs=32.6
Q ss_pred HHHHHHHhcCChhhHHHHHHHHHHcCcHHHHHHHHHHHHh
Q 038267 250 ACEESLLEDINSGNVLERLQEAWLYQLSKLKKGCLTYLFD 289 (295)
Q Consensus 250 ~c~~~l~~~~~~~~~~~~l~~A~~~~~~~L~~~~~~~i~~ 289 (295)
.-.+|+ .++.+++.+++..|...+...|.+.|-++++.
T Consensus 87 wD~~F~--~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~ 124 (159)
T 2ast_A 87 WDQEFL--KVDQGTLFELILAANYLDIKGLLDVTCKTVAN 124 (159)
T ss_dssp HHHHHT--CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHH--cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 344455 37899999999999999999999999999976
No 71
>2cmy_B Beta trypsin, veronica hederifolia trypsin inhibitor; acyl-enzyme intermediate, serine protease inhibitor, zymogen protease, digestion; 2.25A {Veronica hederifolia} SCOP: g.2.4.1
Probab=39.65 E-value=11 Score=19.27 Aligned_cols=23 Identities=17% Similarity=0.063 Sum_probs=16.6
Q ss_pred HHHHHHHHcCcHHHHHHHHHHHH
Q 038267 266 ERLQEAWLYQLSKLKKGCLTYLF 288 (295)
Q Consensus 266 ~~l~~A~~~~~~~L~~~~~~~i~ 288 (295)
..+-.|.+++.++|.+.|++-..
T Consensus 8 kvmcyaqrhsspellrrcldnce 30 (34)
T 2cmy_B 8 KVMCYAQRHSSPELLRRCLDNCE 30 (34)
T ss_dssp HHHHHHBC--CCHHHHHHHHHC-
T ss_pred hHHHHHhhcCCHHHHHHHHHhhh
Confidence 56778999999999999987543
No 72
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=33.20 E-value=1.4e+02 Score=21.62 Aligned_cols=79 Identities=11% Similarity=-0.004 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHhC-CCccc-ccHHHHHHHHHHHhhcCh---------------HHHHHHHHHHHHhcCChhhHHHHHHHH
Q 038267 209 VESCMALLSYLYG-TIKQE-DFWKHRLALLGAANKYDI---------------ADLKDACEESLLEDINSGNVLERLQEA 271 (295)
Q Consensus 209 ~~~f~~~L~~lY~-~~~~~-~~~~~~~~ll~~A~~~~~---------------~~l~~~c~~~l~~~~~~~~~~~~l~~A 271 (295)
...++.+++-.-. .+... -....+..++..+....- ..+...-.+|+ .++.+++.+++.-|
T Consensus 24 S~~ik~ml~~~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~--~vd~~~l~eLi~AA 101 (141)
T 1fs1_B 24 SVTIKTMLEDLGMDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFL--KVDQGTLFELILAA 101 (141)
T ss_dssp CHHHHHHHHHTCCSSEECTTCCHHHHHHHHHHHHHHTTCC-----------------HHHHHHT--CSCHHHHHHHHHHH
T ss_pred hHHHHHHHHhcCCCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHH--hCCHHHHHHHHHHH
Confidence 3456666654211 12221 123556667777766541 22333334445 37899999999999
Q ss_pred HHcCcHHHHHHHHHHHHh
Q 038267 272 WLYQLSKLKKGCLTYLFD 289 (295)
Q Consensus 272 ~~~~~~~L~~~~~~~i~~ 289 (295)
...+...|.+.|-++++.
T Consensus 102 nyL~I~~Lldl~c~~vA~ 119 (141)
T 1fs1_B 102 NYLDIKGLLDVTCKTVAN 119 (141)
T ss_dssp HHHTCHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHH
Confidence 999999999999999976
No 73
>1jya_A YOPE regulator; specific chaperone, type III secretion; 1.74A {Yersinia pseudotuberculosis} SCOP: d.198.1.1 PDB: 1k6z_A 1n5b_A 1l2w_A
Probab=29.68 E-value=66 Score=23.16 Aligned_cols=27 Identities=22% Similarity=0.370 Sum_probs=22.6
Q ss_pred CceecceeeEEEEEeCCeeEEEEeecCCC
Q 038267 30 PFKIGIWNWHLSVEKNRYLYVRLFPEPSR 58 (295)
Q Consensus 30 ~F~~gg~~W~l~~yp~g~~~vsl~l~~~~ 58 (295)
.|.+||+.-+|..||.+ ++.+|..+..
T Consensus 28 SL~Vd~~t~hite~p~~--~LlmFs~L~~ 54 (130)
T 1jya_A 28 GVKVGEFACHITEHPVG--QILMFTLPSL 54 (130)
T ss_dssp EEEETTEEEEEEECSTT--EEEEEECCCC
T ss_pred EEEECCeEEEEEecCCC--eEEEEeccCc
Confidence 58899999999999988 7888887754
No 74
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=21.42 E-value=68 Score=23.90 Aligned_cols=31 Identities=16% Similarity=0.166 Sum_probs=22.1
Q ss_pred CChhhHHHHHHHHHHcCcHHHHHHHHHHHHh
Q 038267 259 INSGNVLERLQEAWLYQLSKLKKGCLTYLFD 289 (295)
Q Consensus 259 ~~~~~~~~~l~~A~~~~~~~L~~~~~~~i~~ 289 (295)
++.+++.+++.-|...+...|.+.|-++++.
T Consensus 93 vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~ 123 (160)
T 2p1m_A 93 IDQATLFELILAANYLNIKNLLDLTCQTVAD 123 (160)
T ss_dssp --------CHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 6788999999999999999999999999987
Done!