Query 038282
Match_columns 234
No_of_seqs 115 out of 1192
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 09:24:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038282.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038282hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00207 hypothetical protein; 99.9 5.4E-23 1.2E-27 194.2 12.2 180 43-224 345-576 (591)
2 KOG2504 Monocarboxylate transp 99.6 2.3E-14 5.1E-19 134.0 13.1 157 45-201 292-477 (509)
3 TIGR00892 2A0113 monocarboxyla 99.3 2.9E-11 6.3E-16 111.5 13.5 182 46-227 236-449 (455)
4 TIGR00890 2A0111 Oxalate/Forma 99.1 5.3E-10 1.2E-14 98.1 10.0 151 42-193 196-375 (377)
5 PRK09705 cynX putative cyanate 99.1 7.5E-10 1.6E-14 100.0 10.6 158 44-201 198-382 (393)
6 PRK11273 glpT sn-glycerol-3-ph 99.0 5.2E-09 1.1E-13 96.3 14.1 165 47-212 249-447 (452)
7 PLN00028 nitrate transmembrane 99.0 2.5E-09 5.5E-14 99.2 9.6 158 44-202 245-435 (476)
8 PRK11551 putative 3-hydroxyphe 98.9 5.4E-09 1.2E-13 94.0 10.1 148 52-199 221-395 (406)
9 PRK09556 uhpT sugar phosphate 98.9 1.4E-08 3.1E-13 93.7 12.7 155 46-200 253-449 (467)
10 TIGR00889 2A0110 nucleoside tr 98.9 2.4E-09 5.3E-14 97.8 7.4 161 43-203 200-405 (418)
11 TIGR00902 2A0127 phenyl propri 98.8 4.6E-08 1E-12 87.9 12.4 151 42-195 196-374 (382)
12 COG2807 CynX Cyanate permease 98.8 3.1E-08 6.6E-13 88.2 10.6 156 42-197 199-382 (395)
13 COG2814 AraJ Arabinose efflux 98.8 5.1E-08 1.1E-12 88.3 11.6 147 52-199 14-187 (394)
14 COG2223 NarK Nitrate/nitrite t 98.8 4.2E-08 9.1E-13 88.7 10.8 162 42-203 209-404 (417)
15 PRK03699 putative transporter; 98.8 7.5E-08 1.6E-12 86.8 12.1 156 49-206 203-386 (394)
16 PRK10091 MFS transport protein 98.8 5.4E-08 1.2E-12 87.4 11.0 145 51-196 3-174 (382)
17 PRK10091 MFS transport protein 98.7 1.5E-07 3.3E-12 84.4 12.7 156 45-200 193-376 (382)
18 TIGR01299 synapt_SV2 synaptic 98.7 1.2E-07 2.5E-12 92.8 12.3 119 48-166 160-291 (742)
19 TIGR00893 2A0114 d-galactonate 98.7 1.6E-07 3.5E-12 82.4 12.1 157 42-198 206-397 (399)
20 COG2271 UhpC Sugar phosphate p 98.7 3.2E-07 7E-12 83.2 13.8 196 8-205 195-439 (448)
21 PRK09528 lacY galactoside perm 98.7 7.7E-08 1.7E-12 87.4 9.6 155 44-199 216-402 (420)
22 PRK11663 regulatory protein Uh 98.7 6.2E-08 1.4E-12 88.6 9.0 126 70-196 42-194 (434)
23 PRK11663 regulatory protein Uh 98.7 3.9E-07 8.4E-12 83.4 13.8 151 47-198 239-422 (434)
24 PRK10504 putative transporter; 98.7 1.2E-07 2.6E-12 87.1 10.1 148 51-199 10-184 (471)
25 PRK03545 putative arabinose tr 98.7 3E-07 6.5E-12 82.6 12.0 127 71-198 29-182 (390)
26 TIGR00881 2A0104 phosphoglycer 98.7 4.3E-08 9.3E-13 86.1 6.2 128 72-199 16-170 (379)
27 PRK10213 nepI ribonucleoside t 98.6 2.3E-07 4.9E-12 84.0 10.8 124 69-193 38-188 (394)
28 TIGR00896 CynX cyanate transpo 98.6 9.3E-08 2E-12 84.6 7.8 119 43-161 189-316 (355)
29 TIGR02332 HpaX 4-hydroxyphenyl 98.6 1.7E-07 3.8E-12 85.3 9.6 127 72-198 29-187 (412)
30 TIGR00924 yjdL_sub1_fam amino 98.6 5E-07 1.1E-11 84.1 12.4 147 51-198 10-190 (475)
31 PRK03699 putative transporter; 98.6 2.6E-07 5.5E-12 83.3 10.2 146 52-197 8-180 (394)
32 TIGR00891 2A0112 putative sial 98.6 6.5E-07 1.4E-11 79.6 12.6 97 70-166 31-136 (405)
33 PRK10054 putative transporter; 98.6 3.2E-07 6.9E-12 83.1 10.0 146 51-198 7-180 (395)
34 PRK11128 putative 3-phenylprop 98.6 7.2E-07 1.6E-11 80.1 12.2 149 42-193 196-372 (382)
35 TIGR00710 efflux_Bcr_CflA drug 98.6 4.1E-07 8.9E-12 80.6 10.5 148 50-198 3-178 (385)
36 PRK09952 shikimate transporter 98.6 7.2E-07 1.6E-11 81.9 12.2 156 45-200 243-433 (438)
37 PRK10642 proline/glycine betai 98.6 9.9E-07 2.1E-11 82.1 13.0 160 42-201 239-431 (490)
38 PRK05122 major facilitator sup 98.6 4E-07 8.8E-12 81.7 9.7 135 70-207 235-396 (399)
39 PRK10489 enterobactin exporter 98.5 2.2E-07 4.8E-12 84.2 8.0 151 44-196 217-395 (417)
40 TIGR00895 2A0115 benzoate tran 98.5 6.4E-07 1.4E-11 79.2 10.8 126 71-197 37-189 (398)
41 TIGR00897 2A0118 polyol permea 98.5 7.4E-07 1.6E-11 80.6 11.4 154 44-200 215-401 (402)
42 PF11700 ATG22: Vacuole efflux 98.5 3.9E-07 8.5E-12 85.0 9.8 193 9-202 237-470 (477)
43 TIGR00893 2A0114 d-galactonate 98.5 7.4E-08 1.6E-12 84.5 4.7 127 72-199 15-168 (399)
44 PRK03633 putative MFS family t 98.5 6.2E-07 1.3E-11 80.4 10.5 152 43-196 192-368 (381)
45 TIGR00883 2A0106 metabolite-pr 98.5 7.1E-07 1.5E-11 78.7 10.4 149 41-189 207-390 (394)
46 PRK10406 alpha-ketoglutarate t 98.5 2.1E-06 4.5E-11 78.5 13.6 159 43-202 234-426 (432)
47 TIGR00900 2A0121 H+ Antiporter 98.5 2.3E-07 5.1E-12 81.1 7.1 147 53-200 1-179 (365)
48 PRK11195 lysophospholipid tran 98.5 3.1E-07 6.6E-12 83.1 7.8 117 50-166 2-124 (393)
49 PRK09584 tppB putative tripept 98.5 2E-06 4.3E-11 80.6 13.1 155 43-198 12-199 (500)
50 TIGR00899 2A0120 sugar efflux 98.5 1.1E-06 2.5E-11 77.6 10.7 154 43-198 191-372 (375)
51 PF07690 MFS_1: Major Facilita 98.5 1.5E-07 3.3E-12 82.0 5.0 137 59-196 4-168 (352)
52 TIGR00886 2A0108 nitrite extru 98.5 1.1E-06 2.5E-11 77.4 10.4 114 52-166 2-126 (366)
53 TIGR00712 glpT glycerol-3-phos 98.5 3.5E-06 7.6E-11 77.1 13.9 158 46-204 246-437 (438)
54 PRK09528 lacY galactoside perm 98.5 8.4E-07 1.8E-11 80.6 9.7 79 45-123 4-87 (420)
55 TIGR00885 fucP L-fucose:H+ sym 98.5 2.5E-06 5.4E-11 77.9 12.8 142 43-184 224-395 (410)
56 TIGR00712 glpT glycerol-3-phos 98.5 5.1E-07 1.1E-11 82.6 8.1 126 74-199 49-205 (438)
57 PRK11551 putative 3-hydroxyphe 98.4 1.8E-06 3.9E-11 77.7 11.2 124 72-196 36-186 (406)
58 TIGR00879 SP MFS transporter, 98.4 1.5E-06 3.1E-11 78.5 10.5 127 73-199 50-216 (481)
59 cd06174 MFS The Major Facilita 98.4 1.5E-06 3.3E-11 75.1 10.2 145 54-199 2-173 (352)
60 PRK03545 putative arabinose tr 98.4 2.5E-06 5.5E-11 76.6 12.0 154 43-199 197-379 (390)
61 COG2814 AraJ Arabinose efflux 98.4 3.5E-06 7.6E-11 76.5 12.4 160 43-204 203-390 (394)
62 PRK10133 L-fucose transporter; 98.4 4E-06 8.7E-11 77.2 13.1 119 44-162 251-379 (438)
63 PRK11043 putative transporter; 98.4 2.9E-06 6.2E-11 76.4 11.7 128 71-199 26-180 (401)
64 PRK11273 glpT sn-glycerol-3-ph 98.4 3.3E-06 7.1E-11 77.7 12.3 152 46-199 21-207 (452)
65 TIGR00711 efflux_EmrB drug res 98.4 1.3E-06 2.9E-11 80.1 9.7 142 57-199 8-176 (485)
66 COG2271 UhpC Sugar phosphate p 98.4 5.7E-06 1.2E-10 75.2 12.8 155 44-199 19-205 (448)
67 PRK11652 emrD multidrug resist 98.4 3.4E-06 7.3E-11 75.7 11.4 126 70-196 27-179 (394)
68 PRK03893 putative sialic acid 98.4 2.1E-06 4.6E-11 79.3 10.3 122 71-193 295-446 (496)
69 TIGR02718 sider_RhtX_FptX side 98.4 2.2E-06 4.8E-11 77.0 10.1 152 43-195 200-386 (390)
70 TIGR00890 2A0111 Oxalate/Forma 98.4 2.2E-06 4.8E-11 75.1 9.8 129 70-199 22-176 (377)
71 TIGR00882 2A0105 oligosacchari 98.4 6.7E-06 1.4E-10 74.0 13.1 147 50-198 1-181 (396)
72 PRK09874 drug efflux system pr 98.4 5.6E-06 1.2E-10 74.2 12.3 155 44-199 211-397 (408)
73 cd06174 MFS The Major Facilita 98.4 1.8E-06 4E-11 74.6 8.6 146 51-197 175-349 (352)
74 PRK11102 bicyclomycin/multidru 98.4 1.3E-06 2.8E-11 77.6 7.8 128 70-198 10-164 (377)
75 PRK10473 multidrug efflux syst 98.3 3.1E-06 6.8E-11 75.9 10.2 129 70-199 22-177 (392)
76 PRK12307 putative sialic acid 98.3 3.3E-06 7.2E-11 76.4 10.3 125 43-167 220-358 (426)
77 PRK11902 ampG muropeptide tran 98.3 1.4E-06 3.1E-11 78.7 7.7 159 43-202 201-392 (402)
78 PRK15402 multidrug efflux syst 98.3 3.8E-06 8.2E-11 75.8 10.4 146 51-197 9-185 (406)
79 PRK03893 putative sialic acid 98.3 3.4E-06 7.4E-11 77.9 10.3 115 52-166 21-144 (496)
80 PRK09705 cynX putative cyanate 98.3 5E-06 1.1E-10 75.1 11.0 122 70-192 28-176 (393)
81 PRK11646 multidrug resistance 98.3 9E-06 2E-10 73.7 12.7 153 43-195 200-383 (400)
82 TIGR01272 gluP glucose/galacto 98.3 9.1E-06 2E-10 71.5 12.1 119 44-162 133-262 (310)
83 PRK09874 drug efflux system pr 98.3 8E-06 1.7E-10 73.2 11.5 148 50-199 13-192 (408)
84 PRK15034 nitrate/nitrite trans 98.3 8.2E-06 1.8E-10 75.8 11.8 158 44-202 245-456 (462)
85 PRK12307 putative sialic acid 98.3 7.5E-06 1.6E-10 74.1 11.1 98 70-167 37-143 (426)
86 TIGR00882 2A0105 oligosacchari 98.3 1.1E-05 2.3E-10 72.7 11.9 155 43-198 207-393 (396)
87 PRK11646 multidrug resistance 98.3 9.8E-06 2.1E-10 73.5 11.4 148 47-197 7-182 (400)
88 TIGR02332 HpaX 4-hydroxyphenyl 98.3 4.5E-06 9.7E-11 76.0 9.2 143 47-189 238-410 (412)
89 PRK10077 xylE D-xylose transpo 98.3 8.2E-06 1.8E-10 75.0 11.0 119 81-199 50-214 (479)
90 COG0738 FucP Fucose permease [ 98.2 1.6E-05 3.4E-10 72.0 12.1 122 43-165 228-358 (422)
91 PRK15403 multidrug efflux syst 98.2 5.8E-06 1.3E-10 75.3 9.5 127 70-197 35-188 (413)
92 PRK15402 multidrug efflux syst 98.2 1.5E-05 3.4E-10 71.8 12.1 141 43-184 207-379 (406)
93 TIGR00894 2A0114euk Na(+)-depe 98.2 1.3E-05 2.8E-10 73.7 11.5 165 42-207 252-457 (465)
94 PF03825 Nuc_H_symport: Nucleo 98.2 2.1E-05 4.6E-10 71.9 12.6 158 42-199 198-394 (400)
95 PRK11010 ampG muropeptide tran 98.2 1.2E-05 2.7E-10 75.1 11.2 157 43-200 214-403 (491)
96 PRK15034 nitrate/nitrite trans 98.2 9.8E-06 2.1E-10 75.3 10.3 118 48-166 31-163 (462)
97 PRK12382 putative transporter; 98.2 8.6E-06 1.9E-10 73.0 9.5 127 70-199 235-388 (392)
98 PRK10489 enterobactin exporter 98.2 2.6E-06 5.7E-11 77.2 5.9 154 45-199 11-196 (417)
99 PRK15075 citrate-proton sympor 98.2 2.7E-05 5.9E-10 71.2 12.6 122 45-166 231-367 (434)
100 PRK10213 nepI ribonucleoside t 98.2 3.9E-05 8.5E-10 69.4 13.2 149 43-193 208-384 (394)
101 PRK10429 melibiose:sodium symp 98.2 1.4E-05 3E-10 74.2 10.4 115 45-159 225-353 (473)
102 PRK10054 putative transporter; 98.2 1.7E-05 3.6E-10 71.9 10.5 155 42-197 197-381 (395)
103 PRK14995 methyl viologen resis 98.2 1.5E-05 3.3E-10 74.3 10.4 132 67-199 22-181 (495)
104 TIGR00792 gph sugar (Glycoside 98.2 1.6E-05 3.4E-10 72.2 10.3 116 44-160 215-341 (437)
105 PLN00028 nitrate transmembrane 98.1 3.9E-05 8.4E-10 71.3 13.0 129 70-199 55-218 (476)
106 TIGR00900 2A0121 H+ Antiporter 98.1 6.2E-06 1.3E-10 72.0 7.1 123 44-166 203-337 (365)
107 PRK10207 dipeptide/tripeptide 98.1 3.9E-05 8.5E-10 71.8 12.5 145 51-196 14-190 (489)
108 PRK06814 acylglycerophosphoeth 98.1 2E-05 4.4E-10 80.3 11.3 154 44-197 218-419 (1140)
109 TIGR00892 2A0113 monocarboxyla 98.1 1.8E-05 3.9E-10 73.0 9.9 126 72-199 40-193 (455)
110 TIGR00886 2A0108 nitrite extru 98.1 2.5E-05 5.4E-10 68.8 10.1 88 43-130 217-309 (366)
111 PRK12382 putative transporter; 98.1 3.6E-05 7.9E-10 69.0 11.1 121 47-167 11-149 (392)
112 PRK03633 putative MFS family t 98.1 1.6E-05 3.6E-10 71.2 8.8 117 50-166 5-130 (381)
113 TIGR00897 2A0118 polyol permea 98.1 2.4E-05 5.1E-10 70.8 9.6 115 53-167 15-142 (402)
114 PRK09556 uhpT sugar phosphate 98.0 6.5E-05 1.4E-09 69.4 12.4 127 73-199 51-211 (467)
115 PRK15462 dipeptide/tripeptide 98.0 7E-05 1.5E-09 70.2 12.7 146 51-197 9-186 (493)
116 PRK05122 major facilitator sup 98.0 4.7E-05 1E-09 68.3 11.2 117 51-167 15-149 (399)
117 PF01306 LacY_symp: LacY proto 98.0 2.1E-05 4.6E-10 72.0 8.8 157 45-202 214-402 (412)
118 TIGR00903 2A0129 major facilit 98.0 9.9E-05 2.1E-09 66.5 12.9 151 43-197 184-362 (368)
119 PRK10077 xylE D-xylose transpo 98.0 3.8E-05 8.3E-10 70.5 10.5 130 72-202 292-459 (479)
120 TIGR00901 2A0125 AmpG-related 98.0 3.4E-05 7.3E-10 68.2 9.8 124 43-166 198-345 (356)
121 TIGR00898 2A0119 cation transp 98.0 2E-05 4.2E-10 73.2 8.2 158 42-202 314-497 (505)
122 PRK10504 putative transporter; 98.0 0.00016 3.4E-09 66.6 13.7 122 45-166 255-389 (471)
123 PRK15011 sugar efflux transpor 98.0 0.00011 2.3E-09 66.3 12.4 128 70-199 235-390 (393)
124 TIGR00887 2A0109 phosphate:H+ 98.0 6.2E-05 1.4E-09 70.2 11.2 85 82-166 52-151 (502)
125 TIGR00879 SP MFS transporter, 98.0 7.9E-06 1.7E-10 73.7 4.8 129 70-199 303-469 (481)
126 TIGR00898 2A0119 cation transp 98.0 9.3E-06 2E-10 75.3 5.3 127 73-199 111-263 (505)
127 TIGR00894 2A0114euk Na(+)-depe 98.0 5.8E-06 1.3E-10 76.0 3.8 120 80-199 70-218 (465)
128 TIGR00881 2A0104 phosphoglycer 97.9 0.00013 2.7E-09 64.0 11.5 123 44-166 209-346 (379)
129 TIGR00885 fucP L-fucose:H+ sym 97.9 7.8E-05 1.7E-09 68.1 10.5 115 52-166 4-130 (410)
130 PF06609 TRI12: Fungal trichot 97.9 7.6E-05 1.6E-09 71.3 10.6 154 46-201 35-218 (599)
131 TIGR00891 2A0112 putative sial 97.9 4.5E-05 9.7E-10 67.8 8.2 114 71-184 258-399 (405)
132 TIGR00895 2A0115 benzoate tran 97.9 8.2E-05 1.8E-09 65.7 9.8 115 52-166 251-374 (398)
133 PRK08633 2-acyl-glycerophospho 97.9 0.00012 2.5E-09 74.5 11.7 124 44-167 225-359 (1146)
134 PRK11102 bicyclomycin/multidru 97.9 0.00013 2.9E-09 64.6 10.6 81 44-124 187-272 (377)
135 PRK10473 multidrug efflux syst 97.9 0.00017 3.6E-09 64.7 11.3 89 43-131 195-288 (392)
136 TIGR00710 efflux_Bcr_CflA drug 97.9 0.00019 4.2E-09 63.4 11.6 123 43-166 198-335 (385)
137 PRK09848 glucuronide transport 97.9 0.00024 5.2E-09 65.1 12.4 117 44-160 221-349 (448)
138 TIGR00711 efflux_EmrB drug res 97.8 0.00011 2.4E-09 67.4 9.7 123 44-166 248-384 (485)
139 TIGR00903 2A0129 major facilit 97.8 7.4E-05 1.6E-09 67.3 8.3 126 71-198 11-163 (368)
140 KOG2533 Permease of the major 97.8 0.0002 4.3E-09 67.3 11.1 70 42-111 264-335 (495)
141 TIGR01299 synapt_SV2 synaptic 97.8 0.0001 2.2E-09 72.4 9.1 108 91-200 600-734 (742)
142 PTZ00207 hypothetical protein; 97.8 0.0002 4.4E-09 68.5 10.6 127 71-199 47-204 (591)
143 PRK11043 putative transporter; 97.8 0.00037 8.1E-09 62.6 11.8 123 43-166 195-331 (401)
144 TIGR00887 2A0109 phosphate:H+ 97.7 0.00013 2.8E-09 68.1 8.9 133 69-201 306-490 (502)
145 TIGR00806 rfc RFC reduced fola 97.7 0.00011 2.3E-09 68.5 7.6 134 73-207 48-210 (511)
146 PRK11010 ampG muropeptide tran 97.7 0.00038 8.2E-09 65.1 11.3 152 46-199 7-194 (491)
147 TIGR00896 CynX cyanate transpo 97.7 0.00012 2.6E-09 64.7 7.6 94 71-166 20-122 (355)
148 PRK10406 alpha-ketoglutarate t 97.7 0.00063 1.4E-08 62.1 12.5 93 74-166 45-160 (432)
149 PRK08633 2-acyl-glycerophospho 97.7 0.00027 5.9E-09 71.9 10.9 123 45-167 3-140 (1146)
150 PF07690 MFS_1: Major Facilita 97.7 3.6E-05 7.7E-10 67.0 3.8 123 44-166 199-335 (352)
151 KOG1330 Sugar transporter/spin 97.7 2.4E-05 5.3E-10 71.9 2.4 134 72-205 54-215 (493)
152 PRK10642 proline/glycine betai 97.6 0.0014 3.1E-08 61.0 14.1 76 92-167 63-155 (490)
153 PRK10133 L-fucose transporter; 97.6 0.00053 1.2E-08 63.1 11.0 112 52-163 27-150 (438)
154 KOG0255 Synaptic vesicle trans 97.5 0.00018 3.9E-09 67.3 6.6 112 81-195 113-250 (521)
155 TIGR00805 oat sodium-independe 97.5 3.1E-05 6.8E-10 74.7 1.4 95 72-166 54-208 (633)
156 COG2270 Permeases of the major 97.5 0.00037 7.9E-09 63.6 7.8 160 43-202 244-431 (438)
157 PRK11902 ampG muropeptide tran 97.5 0.0013 2.8E-08 59.3 11.5 126 70-197 18-179 (402)
158 PRK14995 methyl viologen resis 97.5 0.00082 1.8E-08 62.7 10.3 122 45-166 253-387 (495)
159 KOG0569 Permease of the major 97.5 0.0016 3.5E-08 60.9 11.7 173 40-215 254-469 (485)
160 PF13347 MFS_2: MFS/sugar tran 97.4 0.0003 6.4E-09 64.2 6.6 119 43-162 217-347 (428)
161 KOG0254 Predicted transporter 97.4 0.00069 1.5E-08 63.6 9.2 80 87-166 90-178 (513)
162 PRK09952 shikimate transporter 97.4 0.0034 7.4E-08 57.6 13.5 71 97-167 75-162 (438)
163 PRK15011 sugar efflux transpor 97.4 0.0019 4.2E-08 58.1 11.6 153 44-198 9-192 (393)
164 TIGR00899 2A0120 sugar efflux 97.4 0.0013 2.8E-08 58.0 10.1 128 70-198 16-174 (375)
165 KOG2532 Permease of the major 97.4 0.00015 3.2E-09 67.7 4.1 121 81-201 68-217 (466)
166 PF03825 Nuc_H_symport: Nucleo 97.4 0.0023 5E-08 58.5 11.9 98 70-167 21-130 (400)
167 COG3104 PTR2 Dipeptide/tripept 97.4 0.0022 4.8E-08 59.7 11.7 154 47-201 16-207 (498)
168 PF05977 MFS_3: Transmembrane 97.4 0.0011 2.4E-08 62.7 10.1 122 45-166 4-139 (524)
169 KOG4686 Predicted sugar transp 97.4 0.002 4.4E-08 56.5 10.3 131 50-184 263-423 (459)
170 PF05977 MFS_3: Transmembrane 97.4 0.00019 4.2E-09 67.8 4.4 155 47-202 214-396 (524)
171 PRK06814 acylglycerophosphoeth 97.3 0.0022 4.8E-08 65.6 11.5 154 45-199 5-194 (1140)
172 KOG2615 Permease of the major 97.3 0.0014 3E-08 59.4 8.6 87 79-166 61-156 (451)
173 PRK09669 putative symporter Ya 97.3 0.0045 9.7E-08 56.7 12.3 118 43-160 221-349 (444)
174 TIGR00880 2_A_01_02 Multidrug 97.3 0.00022 4.8E-09 53.1 3.0 105 94-199 6-137 (141)
175 PF00083 Sugar_tr: Sugar (and 97.2 2.5E-05 5.4E-10 71.3 -3.1 82 86-167 46-139 (451)
176 TIGR00902 2A0127 phenyl propri 97.2 0.0037 8E-08 56.1 10.4 106 53-158 6-122 (382)
177 TIGR00901 2A0125 AmpG-related 97.2 0.0024 5.3E-08 56.3 9.1 126 71-198 8-176 (356)
178 PRK11128 putative 3-phenylprop 97.2 0.0041 8.8E-08 55.7 10.5 123 70-193 23-172 (382)
179 KOG2532 Permease of the major 97.2 0.0014 3.1E-08 61.1 7.7 168 40-207 247-454 (466)
180 PRK15403 multidrug efflux syst 97.1 0.0079 1.7E-07 54.8 11.6 66 43-108 210-276 (413)
181 KOG0569 Permease of the major 97.1 0.0027 5.9E-08 59.4 8.5 80 88-167 62-153 (485)
182 COG2211 MelB Na+/melibiose sym 97.0 0.0069 1.5E-07 56.4 10.6 115 46-160 231-357 (467)
183 TIGR01301 GPH_sucrose GPH fami 97.0 0.006 1.3E-07 57.1 10.2 129 71-199 24-217 (477)
184 KOG0252 Inorganic phosphate tr 97.0 0.0034 7.4E-08 58.1 8.1 84 83-166 81-180 (538)
185 PRK11195 lysophospholipid tran 96.9 0.0087 1.9E-07 54.1 10.6 117 45-163 199-325 (393)
186 TIGR00889 2A0110 nucleoside tr 96.9 0.013 2.8E-07 53.6 11.5 84 72-155 23-117 (418)
187 TIGR00883 2A0106 metabolite-pr 96.7 0.012 2.7E-07 51.5 9.9 70 97-166 46-132 (394)
188 PRK11462 putative transporter; 96.7 0.075 1.6E-06 49.3 15.1 117 44-160 221-348 (460)
189 PF03209 PUCC: PUCC protein; 96.7 0.013 2.9E-07 53.4 9.7 123 44-166 201-337 (403)
190 KOG2504 Monocarboxylate transp 96.7 0.0087 1.9E-07 56.5 8.8 148 54-201 45-222 (509)
191 KOG3764 Vesicular amine transp 96.6 0.0063 1.4E-07 55.5 7.0 121 81-202 101-249 (464)
192 PRK11652 emrD multidrug resist 96.6 0.035 7.5E-07 49.7 11.6 123 43-166 199-334 (394)
193 COG2223 NarK Nitrate/nitrite t 96.5 0.012 2.6E-07 53.8 7.9 94 73-167 36-141 (417)
194 PRK15075 citrate-proton sympor 96.5 0.026 5.7E-07 51.5 10.3 96 71-166 35-153 (434)
195 PF06609 TRI12: Fungal trichot 96.4 0.0095 2.1E-07 57.2 7.1 114 40-153 298-428 (599)
196 TIGR00788 fbt folate/biopterin 96.2 0.0098 2.1E-07 55.3 6.0 122 44-166 245-387 (468)
197 TIGR00805 oat sodium-independe 96.2 0.033 7.2E-07 53.9 9.6 84 44-127 323-414 (633)
198 TIGR00792 gph sugar (Glycoside 95.9 0.071 1.5E-06 48.2 9.9 90 70-159 18-128 (437)
199 KOG2563 Permease of the major 95.8 0.036 7.8E-07 51.3 7.6 119 43-161 258-390 (480)
200 KOG0253 Synaptic vesicle trans 95.6 0.036 7.7E-07 50.5 6.5 109 94-202 389-521 (528)
201 KOG0252 Inorganic phosphate tr 95.3 0.068 1.5E-06 49.8 7.5 156 71-233 324-525 (538)
202 KOG2325 Predicted transporter/ 95.3 0.11 2.4E-06 48.7 9.0 131 70-200 53-229 (488)
203 KOG2533 Permease of the major 95.2 0.11 2.4E-06 48.9 8.7 119 79-198 74-225 (495)
204 TIGR02718 sider_RhtX_FptX side 94.9 0.32 6.9E-06 43.5 10.8 130 69-199 19-183 (390)
205 PRK09669 putative symporter Ya 94.8 0.28 6E-06 44.9 10.3 89 72-160 30-139 (444)
206 TIGR00926 2A1704 Peptide:H+ sy 94.8 0.089 1.9E-06 51.3 7.1 120 80-199 17-181 (654)
207 KOG3626 Organic anion transpor 94.5 0.22 4.8E-06 48.9 9.1 65 44-108 385-451 (735)
208 PF12832 MFS_1_like: MFS_1 lik 94.2 0.18 4E-06 35.1 5.9 48 70-117 19-70 (77)
209 PF01306 LacY_symp: LacY proto 94.1 0.085 1.8E-06 48.5 5.0 61 48-108 4-65 (412)
210 COG0738 FucP Fucose permease [ 94.0 0.2 4.4E-06 45.8 7.3 96 70-165 31-139 (422)
211 COG2807 CynX Cyanate permease 93.8 0.66 1.4E-05 42.1 9.9 128 72-199 33-185 (395)
212 TIGR00788 fbt folate/biopterin 93.3 0.99 2.1E-05 42.0 10.8 145 53-201 28-210 (468)
213 TIGR01301 GPH_sucrose GPH fami 93.1 1.5 3.2E-05 41.2 11.6 152 51-202 258-473 (477)
214 PF13347 MFS_2: MFS/sugar tran 92.9 0.29 6.3E-06 44.6 6.6 89 73-161 23-134 (428)
215 PF06813 Nodulin-like: Nodulin 92.9 1.5 3.2E-05 37.7 10.4 60 72-132 23-86 (250)
216 KOG3762 Predicted transporter 92.4 0.17 3.7E-06 48.0 4.4 151 46-202 366-549 (618)
217 PRK10429 melibiose:sodium symp 92.3 1.5 3.3E-05 40.6 10.6 89 71-159 26-135 (473)
218 PF03137 OATP: Organic Anion T 91.8 0.049 1.1E-06 51.8 0.0 83 43-125 297-387 (539)
219 PF06779 DUF1228: Protein of u 91.5 0.9 1.9E-05 32.4 6.3 63 70-132 11-77 (85)
220 PF05631 DUF791: Protein of un 90.8 4.3 9.3E-05 36.6 11.3 121 76-197 59-213 (354)
221 KOG3764 Vesicular amine transp 90.8 0.88 1.9E-05 41.9 6.9 161 40-201 259-455 (464)
222 KOG3098 Uncharacterized conser 90.5 3.9 8.5E-05 38.3 11.2 121 45-166 234-388 (461)
223 PRK09584 tppB putative tripept 90.4 1.8 4E-05 40.5 9.2 119 88-206 318-485 (500)
224 PF00083 Sugar_tr: Sugar (and 89.4 0.012 2.7E-07 53.5 -6.2 94 71-166 273-385 (451)
225 KOG0254 Predicted transporter 88.4 0.77 1.7E-05 43.0 5.0 114 52-166 296-431 (513)
226 PRK09848 glucuronide transport 87.8 3.8 8.3E-05 37.4 9.1 36 73-108 30-66 (448)
227 KOG1330 Sugar transporter/spin 87.2 2.6 5.7E-05 39.4 7.5 29 81-109 278-306 (493)
228 KOG0255 Synaptic vesicle trans 86.2 5.4 0.00012 37.2 9.3 172 42-216 309-509 (521)
229 PF11700 ATG22: Vacuole efflux 85.6 24 0.00053 33.1 13.2 77 88-164 72-160 (477)
230 KOG0253 Synaptic vesicle trans 84.8 13 0.00027 34.5 10.4 146 72-218 98-277 (528)
231 PF03209 PUCC: PUCC protein; 83.5 5.8 0.00013 36.4 7.9 90 77-167 6-126 (403)
232 PF05978 UNC-93: Ion channel r 83.3 5.7 0.00012 31.5 6.9 75 89-163 44-122 (156)
233 PF01770 Folate_carrier: Reduc 82.1 3.5 7.7E-05 38.0 6.0 134 72-206 24-188 (412)
234 PRK11462 putative transporter; 81.4 16 0.00034 33.9 10.1 87 73-159 31-138 (460)
235 COG2270 Permeases of the major 79.2 3.6 7.7E-05 38.1 4.9 80 88-167 60-152 (438)
236 COG0477 ProP Permeases of the 76.1 39 0.00084 27.1 10.3 89 73-161 24-125 (338)
237 TIGR00924 yjdL_sub1_fam amino 75.8 33 0.00072 31.8 10.5 114 88-202 314-470 (475)
238 PF00854 PTR2: POT family; In 73.6 8.3 0.00018 34.4 5.8 86 113-199 2-122 (372)
239 PF03137 OATP: Organic Anion T 72.6 1.1 2.3E-05 42.8 -0.2 130 73-202 25-252 (539)
240 PRK03612 spermidine synthase; 70.3 68 0.0015 30.5 11.3 30 80-109 44-73 (521)
241 COG3114 CcmD Heme exporter pro 67.9 25 0.00055 23.6 5.5 48 177-224 13-62 (67)
242 TIGR00806 rfc RFC reduced fola 67.2 74 0.0016 30.3 10.6 28 139-166 362-389 (511)
243 PF03092 BT1: BT1 family; Int 65.4 42 0.00091 30.9 8.7 127 74-202 12-177 (433)
244 COG2211 MelB Na+/melibiose sym 64.2 90 0.002 29.4 10.5 83 76-158 38-140 (467)
245 KOG4686 Predicted sugar transp 61.7 12 0.00027 33.3 4.1 85 80-164 73-170 (459)
246 PF06963 FPN1: Ferroportin1 (F 59.3 47 0.001 30.8 7.8 77 45-122 253-333 (432)
247 PF01770 Folate_carrier: Reduc 58.3 1.3E+02 0.0027 27.9 10.3 122 44-165 240-375 (412)
248 KOG2563 Permease of the major 57.6 1.7E+02 0.0037 27.6 11.5 114 52-166 42-176 (480)
249 PF06305 DUF1049: Protein of u 54.9 42 0.00092 22.0 5.1 16 185-200 24-39 (68)
250 PRK10207 dipeptide/tripeptide 54.3 1.1E+02 0.0024 28.6 9.5 67 139-205 388-481 (489)
251 KOG3762 Predicted transporter 49.3 16 0.00034 35.2 2.9 62 70-131 30-96 (618)
252 TIGR00939 2a57 Equilibrative N 46.1 53 0.0011 30.5 5.9 22 87-108 308-329 (437)
253 KOG2816 Predicted transporter 45.1 61 0.0013 30.4 6.2 87 81-167 272-367 (463)
254 TIGR00985 3a0801s04tom mitocho 43.2 51 0.0011 26.0 4.5 20 200-219 30-49 (148)
255 TIGR03141 cytochro_ccmD heme e 40.7 86 0.0019 19.2 4.7 8 177-184 5-12 (45)
256 PF15086 UPF0542: Uncharacteri 39.2 1E+02 0.0022 21.3 4.8 38 180-217 24-62 (74)
257 PF07672 MFS_Mycoplasma: Mycop 37.7 2.3E+02 0.005 24.6 8.0 78 40-117 83-177 (267)
258 PF00558 Vpu: Vpu protein; In 37.3 43 0.00094 23.6 3.0 22 210-231 41-63 (81)
259 PF02064 MAS20: MAS20 protein 37.3 11 0.00023 28.7 -0.1 21 200-220 20-40 (121)
260 KOG0637 Sucrose transporter an 36.2 57 0.0012 30.8 4.4 61 71-131 52-121 (498)
261 PF03092 BT1: BT1 family; Int 35.8 83 0.0018 28.9 5.5 84 83-166 252-354 (433)
262 PF04995 CcmD: Heme exporter p 34.3 1.1E+02 0.0025 18.7 5.3 7 178-184 5-11 (46)
263 KOG3810 Micronutrient transpor 31.8 4.2E+02 0.0091 24.5 10.7 57 110-166 301-362 (433)
264 COG2962 RarD Predicted permeas 29.3 2.9E+02 0.0063 24.3 7.4 85 43-131 61-146 (293)
265 COG3247 HdeD Uncharacterized c 28.2 2.5E+02 0.0053 23.0 6.4 72 53-131 75-151 (185)
266 PF10669 Phage_Gp23: Protein g 28.2 1.9E+02 0.0042 21.1 5.1 16 202-218 39-54 (121)
267 KOG1608 Protein transporter of 28.0 3.6E+02 0.0077 24.0 7.6 22 175-196 287-309 (374)
268 MTH00057 ND6 NADH dehydrogenas 26.7 55 0.0012 26.7 2.4 27 177-203 140-167 (186)
269 PRK11677 hypothetical protein; 26.3 1.2E+02 0.0025 23.6 4.0 11 223-233 39-49 (134)
270 PF01988 VIT1: VIT family; In 25.8 1.7E+02 0.0037 24.1 5.3 47 185-231 36-84 (213)
271 KOG1237 H+/oligopeptide sympor 25.6 3.2E+02 0.007 26.4 7.8 135 65-199 51-244 (571)
272 PF01102 Glycophorin_A: Glycop 25.2 96 0.0021 23.6 3.3 21 185-205 74-94 (122)
273 KOG2816 Predicted transporter 24.7 89 0.0019 29.3 3.7 69 96-165 72-147 (463)
274 PF14770 TMEM18: Transmembrane 24.6 2.1E+02 0.0045 21.8 5.1 48 173-220 75-122 (123)
275 TIGR00822 EII-Sor PTS system, 24.3 63 0.0014 28.0 2.5 14 221-234 252-265 (265)
276 PF14012 DUF4229: Protein of u 24.3 2.2E+02 0.0047 19.2 4.7 30 185-214 36-65 (69)
277 KOG3626 Organic anion transpor 24.3 50 0.0011 32.9 2.0 52 81-132 127-182 (735)
278 PTZ00370 STEVOR; Provisional 23.6 1.2E+02 0.0026 26.7 3.9 32 177-208 255-287 (296)
279 PF02990 EMP70: Endomembrane p 22.0 1.3E+02 0.0028 28.6 4.2 63 45-108 252-319 (521)
280 TIGR01478 STEVOR variant surfa 21.2 1.2E+02 0.0026 26.6 3.5 32 177-208 259-291 (295)
281 PF02416 MttA_Hcf106: mttA/Hcf 21.1 1.7E+02 0.0038 18.6 3.5 26 203-228 21-46 (53)
282 PRK03449 putative inner membra 20.7 2E+02 0.0043 25.5 4.9 36 195-231 262-297 (304)
283 TIGR00880 2_A_01_02 Multidrug 20.7 3E+02 0.0066 19.1 8.0 19 90-108 91-109 (141)
No 1
>PTZ00207 hypothetical protein; Provisional
Probab=99.89 E-value=5.4e-23 Score=194.25 Aligned_cols=180 Identities=20% Similarity=0.291 Sum_probs=152.6
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhh-CCChhh--HHHHHHHHHHhcccccccccc-----------
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSL-GYPKRG--ISTFVSLVNIWNCLGRVVSGF----------- 108 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~-G~s~~~--aa~~~si~~i~~~vGRl~~G~----------- 108 (234)
|+.|.+++.+||++|+.++|+.+.++.+++|+..+.+++ |.+.+. ...++++++++|.+||+..|.
T Consensus 345 t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~ 424 (591)
T PTZ00207 345 TFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAE 424 (591)
T ss_pred hHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccc
Confidence 899999999999999999999999999999999999999 883333 334899999999999999998
Q ss_pred --cchHHHHHHHHHHHHHHHHHHHhhcc-chhh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------
Q 038282 109 --FRRPLMLTIILLVSWIGHLLIAFNVP-GGLN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP-------------- 167 (234)
Q Consensus 109 --~gr~~~l~~~~~~~~i~~~ll~~~~~-~~l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-------------- 167 (234)
+.|...+.+..+ +.++.+++....+ ..+| +.|+++|..+++.+++++|+|| ||++.+
T Consensus 425 ~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~ 502 (591)
T PTZ00207 425 DRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIF 502 (591)
T ss_pred cccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHH
Confidence 122233445555 6666666666555 5565 9999999999999999999999 999963
Q ss_pred ----------------CCccccccccccHHHHH-HHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhHHhhccc
Q 038282 168 ----------------EDDLNCIGVECFKLSFI-MTAATLFSAFVSLILVLMTRKFYKSDIHQRFREAAAKSAA 224 (234)
Q Consensus 168 ----------------g~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (234)
.++..|.+..||+.+|+ +++++++++++...++.|.||+|++.+.+|+|.++|+.+.
T Consensus 503 ~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r~~y~~~~~~~~~~~~~~~~~ 576 (591)
T PTZ00207 503 LNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYRRLCLKALEERRRIREEERAL 576 (591)
T ss_pred HHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeehHHHHHHHHHHHHHHHhhhhcc
Confidence 23457888899999999 9999999999999999999999999999999999885553
No 2
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.57 E-value=2.3e-14 Score=134.05 Aligned_cols=157 Identities=22% Similarity=0.306 Sum_probs=130.1
Q ss_pred HHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc------cchHHHHHHH
Q 038282 45 LQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF------FRRPLMLTII 118 (234)
Q Consensus 45 ~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~------~gr~~~l~~~ 118 (234)
.+.+|++.|+.+.+...+.......+..+++++++++|+++.+++.++|++++.+++||+++|+ +.++.+..++
T Consensus 292 ~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ 371 (509)
T KOG2504|consen 292 LSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLT 371 (509)
T ss_pred HHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHH
Confidence 5899999999998888887777777888999999999999999999999999999999999999 2334444455
Q ss_pred HHHHHHHHHHHHhhccch-h--h--hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCccccccc
Q 038282 119 LLVSWIGHLLIAFNVPGG-L--N--IMGFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDDLNCIGV 176 (234)
Q Consensus 119 ~~~~~i~~~ll~~~~~~~-l--~--l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~~ 176 (234)
.+..+++...++...+.. + + ++|++.|...++.+.++.|+.|.+++++. .+|+++|.+
T Consensus 372 ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~t 451 (509)
T KOG2504|consen 372 LLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDIT 451 (509)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeecc
Confidence 555656654445444432 2 3 99999999999999999999999999973 277999999
Q ss_pred cccHHHHH-HHHHHHHHHHHHHHHHh
Q 038282 177 ECFKLSFI-MTAATLFSAFVSLILVL 201 (234)
Q Consensus 177 g~Y~~~f~-~a~~~~va~~l~l~l~~ 201 (234)
++|+..|+ ++.+.+++..+.+..+.
T Consensus 452 g~Y~~~f~~~g~~~~~s~~~~~~~~~ 477 (509)
T KOG2504|consen 452 GNYDHAFYFCGLCFLLSAVLLLILRE 477 (509)
T ss_pred CCeeeehhhcChHHHHHHHHHHHhHH
Confidence 99999999 88888888877777663
No 3
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.31 E-value=2.9e-11 Score=111.54 Aligned_cols=182 Identities=16% Similarity=0.178 Sum_probs=123.3
Q ss_pred HHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc-cc-----hHHHHHHH-
Q 038282 46 QALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF-FR-----RPLMLTII- 118 (234)
Q Consensus 46 ~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~-~g-----r~~~l~~~- 118 (234)
+.+|+|.||...+..++..........+++++.++.|+++.+++.++++.++++.+++++.|+ .+ +++...+.
T Consensus 236 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 315 (455)
T TIGR00892 236 SLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSF 315 (455)
T ss_pred HHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHH
Confidence 688999999887776665555555667888999999999999999999999999999999998 22 22222222
Q ss_pred -HHHHHHHHHHHHhhccch-h--h--hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCcccccc
Q 038282 119 -LLVSWIGHLLIAFNVPGG-L--N--IMGFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDDLNCIG 175 (234)
Q Consensus 119 -~~~~~i~~~ll~~~~~~~-l--~--l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~ 175 (234)
.+..++++++.....+.. + + ++|+++|...+...+++.|.++.++.++. ..|.+.|.
T Consensus 316 ~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~ 395 (455)
T TIGR00892 316 ALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDA 395 (455)
T ss_pred HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehh
Confidence 222233333332222222 2 2 88999999999999999999998887763 26777888
Q ss_pred ccccHHHHH-HHHHHHHHHHHHHHHHh-hhhhhhHHHHHHHhhhHHhhccccch
Q 038282 176 VECFKLSFI-MTAATLFSAFVSLILVL-MTRKFYKSDIHQRFREAAAKSAADKG 227 (234)
Q Consensus 176 ~g~Y~~~f~-~a~~~~va~~l~l~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (234)
.++|+..|+ .+++.+++.+....-+. ..|..-+|.++.-.||++||....+|
T Consensus 396 ~g~~~~~f~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (455)
T TIGR00892 396 TKNYKYIFYASGSIVVSAGLFLAIGNYINYRLLAKEQKAALEREGARDKKDAEG 449 (455)
T ss_pred cCCcchHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccc
Confidence 889999999 77777766654433221 23333344444555666555544443
No 4
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.09 E-value=5.3e-10 Score=98.11 Aligned_cols=151 Identities=25% Similarity=0.339 Sum_probs=114.8
Q ss_pred CCHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 42 YTILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 42 ~~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
.+.++.+|++++|.+.+..++..........+.+++.++.|.++.+++...++.++...++++++|+ ++|++.+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~ 275 (377)
T TIGR00890 196 YTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSI 275 (377)
T ss_pred hhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhH
Confidence 4567899999999888777665555554556677888889999989999999999999999999999 688888877
Q ss_pred HHHHHHHHHHHHHhhcc-ch--h---h-hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCcccc
Q 038282 118 ILLVSWIGHLLIAFNVP-GG--L---N-IMGFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDDLNC 173 (234)
Q Consensus 118 ~~~~~~i~~~ll~~~~~-~~--l---~-l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~ 173 (234)
..++.+++.+++..... .. . . +.|++.|...+..+.++.|.++.++.++. ..|.+.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 355 (377)
T TIGR00890 276 VFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHAL 355 (377)
T ss_pred HHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777665554322 11 1 1 77888999889999999999999988863 134444
Q ss_pred ccccccHHHHH-HHHHHHHHH
Q 038282 174 IGVECFKLSFI-MTAATLFSA 193 (234)
Q Consensus 174 d~~g~Y~~~f~-~a~~~~va~ 193 (234)
|. .+|+..|+ .+++.+++.
T Consensus 356 ~~-~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 356 TE-IGFEYTFIVTGAFALTSL 375 (377)
T ss_pred hh-hchhhHHHHHHHHHHHhc
Confidence 43 35888888 777666654
No 5
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.08 E-value=7.5e-10 Score=100.04 Aligned_cols=158 Identities=12% Similarity=0.114 Sum_probs=117.3
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHH
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIIL 119 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~ 119 (234)
..+.+|++++|.+.+.+++.......+..+++++.+++|.+..+++...++.++++.+|++++|+ ++|++.+....
T Consensus 198 ~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~ 277 (393)
T PRK09705 198 PVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLAL 277 (393)
T ss_pred CcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHH
Confidence 35678899999877766665555555677899999989999999999999999999999999999 68887777777
Q ss_pred HHHHHHHHHHHh-hccc-hh-h-hHhhhhhchhhhhHHHHHHhhCC-CCCCCC-----------------CCcccccccc
Q 038282 120 LVSWIGHLLIAF-NVPG-GL-N-IMGFNFGAQWPLVFAITSEFFGP-KNHKEP-----------------EDDLNCIGVE 177 (234)
Q Consensus 120 ~~~~i~~~ll~~-~~~~-~l-~-l~G~~~G~~~~~~p~l~~~~fG~-~~~~~~-----------------g~g~~~d~~g 177 (234)
.+.+++.+++.. +... .+ . +.|++.|...+.....+.+.++. ++.++. ..|++.|..|
T Consensus 278 ~l~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g 357 (393)
T PRK09705 278 VLQLVGFCGFIWLPLQLPVLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG 357 (393)
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 676666655432 2211 12 2 77888888888777777777764 444431 2667888899
Q ss_pred ccHHHHH-HHHHHHHHHHHHHHHHh
Q 038282 178 CFKLSFI-MTAATLFSAFVSLILVL 201 (234)
Q Consensus 178 ~Y~~~f~-~a~~~~va~~l~l~l~~ 201 (234)
+|+..|+ .+++++++..+.+.++.
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (393)
T PRK09705 358 NYLMDWAFHALCVVGLMIITLRFAP 382 (393)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999 78777777666555443
No 6
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.03 E-value=5.2e-09 Score=96.26 Aligned_cols=165 Identities=10% Similarity=0.031 Sum_probs=108.7
Q ss_pred HhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----c--chHHHH-HHH
Q 038282 47 ALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----F--RRPLML-TII 118 (234)
Q Consensus 47 ~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~--gr~~~l-~~~ 118 (234)
.+|++.+|.+++..++..........++|.+.++ .|++..+++...++.++++.+|+++.|+ + +|+... ...
T Consensus 249 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~ 328 (452)
T PRK11273 249 VLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFF 328 (452)
T ss_pred HHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHH
Confidence 6789999998887777665555566789999887 5999888888889999999999999999 3 343322 222
Q ss_pred HHHHHHHHHHHHhhc-cc-h-h-h---hHhhhhhchhhhhHHHHHHhhCCCCCCCC----------C--------Ccccc
Q 038282 119 LLVSWIGHLLIAFNV-PG-G-L-N---IMGFNFGAQWPLVFAITSEFFGPKNHKEP----------E--------DDLNC 173 (234)
Q Consensus 119 ~~~~~i~~~ll~~~~-~~-~-l-~---l~G~~~G~~~~~~p~l~~~~fG~~~~~~~----------g--------~g~~~ 173 (234)
..+..++.+++.... .. . . . ++|.+..+........+.|.++++..++. + .|.+.
T Consensus 329 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~ 408 (452)
T PRK11273 329 MTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTV 408 (452)
T ss_pred HHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 233333333332211 11 1 1 1 33443333333344567799998888863 1 33445
Q ss_pred ccccccHHHHH-HHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q 038282 174 IGVECFKLSFI-MTAATLFSAFVSLILVLMTRKFYKSDIH 212 (234)
Q Consensus 174 d~~g~Y~~~f~-~a~~~~va~~l~l~l~~~~~~~~~~~~~ 212 (234)
|..| |+..|+ +++++++++++...+...++|..+|.+.
T Consensus 409 ~~~g-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (452)
T PRK11273 409 DFFG-WDGGFMVMIGGSILAVILLIVVMIGEKRHHEELLQ 447 (452)
T ss_pred HHhc-chHHHHHHHHHHHHHHHHHHHHhccccchHHHHHh
Confidence 5555 999999 8888888888887776666666666654
No 7
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.97 E-value=2.5e-09 Score=99.24 Aligned_cols=158 Identities=11% Similarity=0.070 Sum_probs=97.1
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchH------
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRP------ 112 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~------ 112 (234)
+++.++++++|.+++.+++.......+...++++..+ .|++...++.+.++.++++.+||+++|+ ++||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r 324 (476)
T PLN00028 245 LRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGR 324 (476)
T ss_pred HHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchh
Confidence 4677899999998887665555554455567777655 5999999999999999999999999999 4433
Q ss_pred -HHHHHHHHHHHHHHHHHHhhccch--h-h--hHhhhhhchhhhhHHHHHHhhCCCCCCCC----------C---Ccccc
Q 038282 113 -LMLTIILLVSWIGHLLIAFNVPGG--L-N--IMGFNFGAQWPLVFAITSEFFGPKNHKEP----------E---DDLNC 173 (234)
Q Consensus 113 -~~l~~~~~~~~i~~~ll~~~~~~~--l-~--l~G~~~G~~~~~~p~l~~~~fG~~~~~~~----------g---~g~~~ 173 (234)
....+.+++.+++++++....+.. . . +++++.+...+...+++.++ ++++.+.. | .++++
T Consensus 325 ~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~g~lg~~i~~~l~ 403 (476)
T PLN00028 325 LWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFV-SRRSLGVISGLTGAGGNVGAVLTQLLF 403 (476)
T ss_pred HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCccc-ChhhchhhhhhhhccccHHHHHHHHHH
Confidence 233333333333333332222211 1 1 44444333322222223332 34555542 1 33444
Q ss_pred c--cccccHHHHH-HHHHHHHHHHHHHHHHhh
Q 038282 174 I--GVECFKLSFI-MTAATLFSAFVSLILVLM 202 (234)
Q Consensus 174 d--~~g~Y~~~f~-~a~~~~va~~l~l~l~~~ 202 (234)
+ .+++|+..|+ ++++.+++.++.++++.+
T Consensus 404 ~~~~~~~y~~~f~~~~~~~~i~~~~~~~~~~~ 435 (476)
T PLN00028 404 FTGSSYSTETGISLMGVMIIACTLPVAFIHFP 435 (476)
T ss_pred HhcCCccHhhHHHHHHHHHHHHHHHHHheecc
Confidence 4 3567999999 888888888888777643
No 8
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.93 E-value=5.4e-09 Score=94.00 Aligned_cols=148 Identities=13% Similarity=0.086 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHH
Q 038282 52 DMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHL 127 (234)
Q Consensus 52 ~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ 127 (234)
+.+.+++..++.......+..+.+.+.++.|.++.+.+...+..+++..+++++.|+ ++|++.+...++..+++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 300 (406)
T PRK11551 221 ATLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLA 300 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 344444444444444444556788888999999999999999999999999999999 6778877766655555555
Q ss_pred HHHhhccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCccccccccccHHHHH-
Q 038282 128 LIAFNVPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDDLNCIGVECFKLSFI- 184 (234)
Q Consensus 128 ll~~~~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~~g~Y~~~f~- 184 (234)
++....... ++ +.|++.++..+..++++.|.++.++.++. ..|.+.|..++|...++
T Consensus 301 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~ 380 (406)
T PRK11551 301 ALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGA 380 (406)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHH
Confidence 444322221 21 67888888888889999999999888763 26677777788888888
Q ss_pred HHHHHHHHHHHHHHH
Q 038282 185 MTAATLFSAFVSLIL 199 (234)
Q Consensus 185 ~a~~~~va~~l~l~l 199 (234)
...+.+++.++.+.+
T Consensus 381 ~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 381 SIPVILVAALAALLL 395 (406)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777777766665544
No 9
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.92 E-value=1.4e-08 Score=93.68 Aligned_cols=155 Identities=14% Similarity=0.057 Sum_probs=104.5
Q ss_pred HHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHH
Q 038282 46 QALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILL 120 (234)
Q Consensus 46 ~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~ 120 (234)
+.+|+|.+|.+++..++..........++|.+.++ .|+|..+++...++..++..+|++++|+ ++||+.+.....
T Consensus 253 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~ 332 (467)
T PRK09556 253 YVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIA 332 (467)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHH
Confidence 37899999998888777665555566788888865 7999999999999999999999999999 676666554433
Q ss_pred HHHHHHHHHHhh--ccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------C-------Ccccccc
Q 038282 121 VSWIGHLLIAFN--VPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP-----------E-------DDLNCIG 175 (234)
Q Consensus 121 ~~~i~~~ll~~~--~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------g-------~g~~~d~ 175 (234)
+..++..++... .+.. .+ ++|++..+........+.|.++.++.++. | .|++.|.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~ 412 (467)
T PRK09556 333 LALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADP 412 (467)
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcc
Confidence 333332222221 1221 22 45543333333334566789988887752 1 3555661
Q ss_pred -----------ccccHHHHH-HHHHHHHHHHHHHHHH
Q 038282 176 -----------VECFKLSFI-MTAATLFSAFVSLILV 200 (234)
Q Consensus 176 -----------~g~Y~~~f~-~a~~~~va~~l~l~l~ 200 (234)
..+|+..|+ ..++++++.++.+.++
T Consensus 413 ~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 413 TKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred cccccccccccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 245999999 8888888887777665
No 10
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.92 E-value=2.4e-09 Score=97.78 Aligned_cols=161 Identities=11% Similarity=0.031 Sum_probs=120.1
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCCh--------hhHHHHHHHHHHhcccccccccc----cc
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPK--------RGISTFVSLVNIWNCLGRVVSGF----FR 110 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~--------~~aa~~~si~~i~~~vGRl~~G~----~g 110 (234)
+..+.+|+|+||.+++..++..........+.+.+.++.|.++ ...+..+++.++..+++++..|+ +|
T Consensus 200 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g 279 (418)
T TIGR00889 200 DAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFG 279 (418)
T ss_pred hHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4567899999998877777655444344567777888877654 45689999999999999999998 79
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcc-c---h-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------
Q 038282 111 RPLMLTIILLVSWIGHLLIAFNVP-G---G-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP-------------- 167 (234)
Q Consensus 111 r~~~l~~~~~~~~i~~~ll~~~~~-~---~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-------------- 167 (234)
+|+++....++.++++.++....+ . . ++ +.|++.+...+..+.++.|.++.+..++.
T Consensus 280 ~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~ 359 (418)
T TIGR00889 280 IKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSL 359 (418)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHH
Confidence 999998888888777655554221 1 1 12 78888888888888999999998877753
Q ss_pred ----CCcccccccc-----ccHHHHH-HHHHHHHHHHHHHHHHhhh
Q 038282 168 ----EDDLNCIGVE-----CFKLSFI-MTAATLFSAFVSLILVLMT 203 (234)
Q Consensus 168 ----g~g~~~d~~g-----~Y~~~f~-~a~~~~va~~l~l~l~~~~ 203 (234)
.+|.+.|..| +|+.+|+ .+++.++++++.+...+++
T Consensus 360 iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 360 LGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 2666777664 5999999 8888888777776665433
No 11
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.83 E-value=4.6e-08 Score=87.89 Aligned_cols=151 Identities=9% Similarity=-0.092 Sum_probs=115.7
Q ss_pred CCHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 42 YTILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 42 ~~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
.+..+.+|+|++|.+.+..++..........+.+++.++.|.++.+.+.++++..+...++.+++|+ +|.++.+.+
T Consensus 196 ~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~ 275 (382)
T TIGR00902 196 SAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLI 275 (382)
T ss_pred hhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHH
Confidence 3567899999999988877776555555667888899999999999999999999999999999998 688888888
Q ss_pred HHHHHHHHHHHHHhhccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC------------------CCccccc
Q 038282 118 ILLVSWIGHLLIAFNVPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP------------------EDDLNCI 174 (234)
Q Consensus 118 ~~~~~~i~~~ll~~~~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~------------------g~g~~~d 174 (234)
+.+..++.+.++....+.. ++ +.|+++|...+....++.+. ..++.++. .+|+++|
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~ 354 (382)
T TIGR00902 276 SAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYP 354 (382)
T ss_pred HHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888877666543323 22 88999999999988888887 55454421 2777888
Q ss_pred cccccHHHHH-HHHHHHHHHHH
Q 038282 175 GVECFKLSFI-MTAATLFSAFV 195 (234)
Q Consensus 175 ~~g~Y~~~f~-~a~~~~va~~l 195 (234)
..| + ..|. ++++++++.++
T Consensus 355 ~~g-~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 355 TLG-A-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred hcc-H-HHHHHHHHHHHHHHHH
Confidence 775 4 5676 77777665443
No 12
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.82 E-value=3.1e-08 Score=88.24 Aligned_cols=156 Identities=12% Similarity=0.081 Sum_probs=121.5
Q ss_pred CCHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc-----cchHHHHH
Q 038282 42 YTILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF-----FRRPLMLT 116 (234)
Q Consensus 42 ~~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~-----~gr~~~l~ 116 (234)
.+..++.|||.-|.+.+.+.+-+...+.++..+|++..|+|+|+.+++.++|+..+.+....+..-+ -++++...
T Consensus 199 ~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~ 278 (395)
T COG2807 199 VSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVV 278 (395)
T ss_pred ccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHH
Confidence 3456799999999999888888888888899999999999999999999999999999888887777 46677777
Q ss_pred HHHHHHHHHHHHHHh-hccchh-h--hHhhhhhchhhhhHHHHHHhhCCCCCCCC---------------C---Cccccc
Q 038282 117 IILLVSWIGHLLIAF-NVPGGL-N--IMGFNFGAQWPLVFAITSEFFGPKNHKEP---------------E---DDLNCI 174 (234)
Q Consensus 117 ~~~~~~~i~~~ll~~-~~~~~l-~--l~G~~~G~~~~~~p~l~~~~fG~~~~~~~---------------g---~g~~~d 174 (234)
...+++.++..-+.+ +.+..+ . ++|++.|+.+++.-.++.+....-+.... | .|.++|
T Consensus 279 ~~~~~~l~G~~G~~~~P~~~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhD 358 (395)
T COG2807 279 LALLLMLVGLVGLLLAPGQLPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHD 358 (395)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHH
Confidence 777777777666654 333322 2 99999999999999888766654444310 2 788999
Q ss_pred cccccHHHHH-HHHHHHHHHHHHH
Q 038282 175 GVECFKLSFI-MTAATLFSAFVSL 197 (234)
Q Consensus 175 ~~g~Y~~~f~-~a~~~~va~~l~l 197 (234)
.+|||..+++ .+...++..++-+
T Consensus 359 a~gsw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 359 ATGSWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred hcCChHHHHHHHHHHHHHHHHHHh
Confidence 9999999999 6666555554443
No 13
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.80 E-value=5.1e-08 Score=88.33 Aligned_cols=147 Identities=16% Similarity=0.267 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHH
Q 038282 52 DMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHL 127 (234)
Q Consensus 52 ~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ 127 (234)
.-+.+.++.|+.....+.+..-++++++|.|+|..+++.++|+++++-.++-++... ++||+.+...+.+++++.+
T Consensus 14 ~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~ 93 (394)
T COG2814 14 ALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNL 93 (394)
T ss_pred HHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHH
Confidence 344556666776777877888999999999999999999999999999999998887 8999999999999999998
Q ss_pred HHHhhccchh--h---hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---CccccccccccHHHHH-
Q 038282 128 LIAFNVPGGL--N---IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECFKLSFI- 184 (234)
Q Consensus 128 ll~~~~~~~l--~---l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y~~~f~- 184 (234)
+...+.+..+ . +.|++.|..+++..++.+++-.+++.++. | +.++ -..-+|+.+|.
T Consensus 94 l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~i-g~~~GWR~~F~~ 172 (394)
T COG2814 94 LSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFL-GQLFGWRATFLA 172 (394)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHH-HHHhhHHHHHHH
Confidence 8887655443 2 99999999999999999999999999983 2 1121 22357999999
Q ss_pred HHHHHHHHHHHHHHH
Q 038282 185 MTAATLFSAFVSLIL 199 (234)
Q Consensus 185 ~a~~~~va~~l~l~l 199 (234)
.+++.+++.+..+..
T Consensus 173 ia~l~ll~~~~~~~~ 187 (394)
T COG2814 173 IAVLALLALLLLWKL 187 (394)
T ss_pred HHHHHHHHHHHHHHh
Confidence 888888887776554
No 14
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.80 E-value=4.2e-08 Score=88.67 Aligned_cols=162 Identities=12% Similarity=0.094 Sum_probs=121.9
Q ss_pred CCHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhh-CCChhhHHHHHHHHHHhcccccccccc----cchHHHHH
Q 038282 42 YTILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSL-GYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLT 116 (234)
Q Consensus 42 ~~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~-G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~ 116 (234)
...+.+.++++-|.+.+.++.+-+....+...++.+.+++ |.++..++...+...+.+.+.|++.|| +|.++++.
T Consensus 209 ~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~ 288 (417)
T COG2223 209 AQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTL 288 (417)
T ss_pred hHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHH
Confidence 3466788899999999988877666666777888888875 999999999999999999999999999 77778788
Q ss_pred HHHHHHHHHHHHHHhhc------cchh---------h-hHhhhhhchhhhhHHHHHHhhCCCCC-----CCC-------C
Q 038282 117 IILLVSWIGHLLIAFNV------PGGL---------N-IMGFNFGAQWPLVFAITSEFFGPKNH-----KEP-------E 168 (234)
Q Consensus 117 ~~~~~~~i~~~ll~~~~------~~~l---------~-l~G~~~G~~~~~~p~l~~~~fG~~~~-----~~~-------g 168 (234)
..+..++++..++.... .... + +.|++.|+++-++|.+-.+-.|.-.- +.+ .
T Consensus 289 ~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~ 368 (417)
T COG2223 289 AVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLA 368 (417)
T ss_pred HHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHHHHHHhccccccchhHH
Confidence 77777777766665432 1111 1 78999999999999887662221100 001 1
Q ss_pred CccccccccccHHHHH-HHHHHHHHHHHHHHHHhhh
Q 038282 169 DDLNCIGVECFKLSFI-MTAATLFSAFVSLILVLMT 203 (234)
Q Consensus 169 ~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l~~~~ 203 (234)
-+..+|.+|+|+..|+ ...+.+++..+...+..|+
T Consensus 369 ~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 369 FGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3456789999999999 9999888888877765544
No 15
>PRK03699 putative transporter; Provisional
Probab=98.78 E-value=7.5e-08 Score=86.77 Aligned_cols=156 Identities=13% Similarity=0.139 Sum_probs=107.6
Q ss_pred ccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHH
Q 038282 49 FSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSW 123 (234)
Q Consensus 49 k~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~ 123 (234)
.++.+|.+.+..++.......+....+.+.++ .|+|..+++.+.++..++..+||+++|+ ++|++.+.....+..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~ 282 (394)
T PRK03699 203 WGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLAL 282 (394)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHH
Confidence 35678887777777665555566788999865 5999999999999999999999999999 688887776666655
Q ss_pred HHHHHHHhhccch-h-h---hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCccccccccccHH
Q 038282 124 IGHLLIAFNVPGG-L-N---IMGFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDDLNCIGVECFKL 181 (234)
Q Consensus 124 i~~~ll~~~~~~~-l-~---l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~~g~Y~~ 181 (234)
++++++....+.. + . +.|++.++.++...+...+... ++.++. ..|++.|..| |..
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g-~~~ 360 (394)
T PRK03699 283 VLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFG-LQA 360 (394)
T ss_pred HHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC-chh
Confidence 5554444332222 2 1 7788888888887777776553 333321 1456666544 778
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhhhhh
Q 038282 182 SFI-MTAATLFSAFVSLILVLMTRKF 206 (234)
Q Consensus 182 ~f~-~a~~~~va~~l~l~l~~~~~~~ 206 (234)
+++ .+++.+++.++.+.+.+.+||+
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK03699 361 ALLTANGLYAVVFVMCILLGFVSKHR 386 (394)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 888 7777777776666665444443
No 16
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.78 E-value=5.4e-08 Score=87.38 Aligned_cols=145 Identities=13% Similarity=0.169 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHH
Q 038282 51 MDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGH 126 (234)
Q Consensus 51 ~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~ 126 (234)
+.+|.+.+..++...........++.+.++.|.|..+.+.+.+...++..++.+++|+ +|||+.+....++.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 82 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGN 82 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHH
Confidence 4567767666666655556667888999999999999999999999999999999998 899999999888888887
Q ss_pred HHHHhhccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---CccccccccccHHHHH
Q 038282 127 LLIAFNVPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECFKLSFI 184 (234)
Q Consensus 127 ~ll~~~~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y~~~f~ 184 (234)
++.....+.. ++ +.|++.|...+..+.++.++++.++.++. + ++...+ ..+|+.+|+
T Consensus 83 ~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~gwr~~f~ 161 (382)
T PRK10091 83 AMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ-EFSWRYTFL 161 (382)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh-hccHHHHHH
Confidence 7666544332 22 88999999888889999999988776642 1 222222 346999998
Q ss_pred -HHHHHHHHHHHH
Q 038282 185 -MTAATLFSAFVS 196 (234)
Q Consensus 185 -~a~~~~va~~l~ 196 (234)
.+...++..+..
T Consensus 162 ~~~~~~~~~~~~~ 174 (382)
T PRK10091 162 LIAVFNIAVLASI 174 (382)
T ss_pred HHHHHHHHHHHHH
Confidence 776666555443
No 17
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.74 E-value=1.5e-07 Score=84.41 Aligned_cols=156 Identities=13% Similarity=0.104 Sum_probs=102.7
Q ss_pred HHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHH
Q 038282 45 LQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIIL 119 (234)
Q Consensus 45 ~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~ 119 (234)
.+.+|++++|.+++..++..........+.+++.++ .|.++.+.+.+.++.+++..+++++.|+ +++++.+....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~ 272 (382)
T PRK10091 193 FHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTD 272 (382)
T ss_pred HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHH
Confidence 467899999987766555433333334556666654 6999999999999999999999999999 67788887777
Q ss_pred HHHHHHHHHHHh-hccchh--h---hHhhhhhchhh-hhHHHHHHhhCCCCCCCC---------------CCcccccccc
Q 038282 120 LVSWIGHLLIAF-NVPGGL--N---IMGFNFGAQWP-LVFAITSEFFGPKNHKEP---------------EDDLNCIGVE 177 (234)
Q Consensus 120 ~~~~i~~~ll~~-~~~~~l--~---l~G~~~G~~~~-~~p~l~~~~fG~~~~~~~---------------g~g~~~d~~g 177 (234)
.+.+++.+++.. ...... . +.+++.++..+ .....+.+.++.+..+.. ..|.+.|.++
T Consensus 273 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~Gp~~~G~l~~~~~ 352 (382)
T PRK10091 273 FIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAIGAYCGGMMLTLGL 352 (382)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHhHHHHHccc
Confidence 777776654433 222221 1 44444443332 222344455555544431 2778888889
Q ss_pred ccHHHHH-HHHHHHHHHHHHHHHH
Q 038282 178 CFKLSFI-MTAATLFSAFVSLILV 200 (234)
Q Consensus 178 ~Y~~~f~-~a~~~~va~~l~l~l~ 200 (234)
+|+..+. .+..++++..+.....
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~ 376 (382)
T PRK10091 353 AYNYVALPAALLSFAAMSSLLLYG 376 (382)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHh
Confidence 9999999 7766666666555443
No 18
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.73 E-value=1.2e-07 Score=92.77 Aligned_cols=119 Identities=21% Similarity=0.210 Sum_probs=90.6
Q ss_pred hccHHHHHHHHHHHHhhhh-HH--h-HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHH
Q 038282 48 LFSMDMLILFLATICGVGG-TL--L-AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIIL 119 (234)
Q Consensus 48 lk~~~F~~l~~~~~~~~~~-~~--~-~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~ 119 (234)
-..+..|.+++...+..+. ++ . +...++.+..+.|++..+.+++.++..++..+|.+++|+ +|||+++.+.+
T Consensus 160 ~~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~l 239 (742)
T TIGR01299 160 GHGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICL 239 (742)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 3457777766555444322 21 1 233466667788999999999999999999999999999 89999999888
Q ss_pred HHHHHHHHHHHhhccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 120 LVSWIGHLLIAFNVPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 120 ~~~~i~~~ll~~~~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
++.+++.++..+..+.. ++ +.|++.|+..++.+++++|+++.++.+.
T Consensus 240 il~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~ 291 (742)
T TIGR01299 240 SVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGE 291 (742)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 88777766655543322 21 8899999999999999999999988775
No 19
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.72 E-value=1.6e-07 Score=82.39 Aligned_cols=157 Identities=16% Similarity=0.064 Sum_probs=106.8
Q ss_pred CCHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHH--H
Q 038282 42 YTILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPL--M 114 (234)
Q Consensus 42 ~~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~--~ 114 (234)
.+.++.+|+|++|.+++..++.......+..+.+.+.++ .|.++.+.+...++.++++.++++++|+ ++||+ .
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 285 (399)
T TIGR00893 206 YQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSL 285 (399)
T ss_pred cchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Confidence 346789999999998888777766666666778888765 6999999999999999999999999999 56664 1
Q ss_pred HHHH--HHHHH--HHHHHHHhhcc-ch-h-h---hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------
Q 038282 115 LTII--LLVSW--IGHLLIAFNVP-GG-L-N---IMGFNFGAQWPLVFAITSEFFGPKNHKEP----------------- 167 (234)
Q Consensus 115 l~~~--~~~~~--i~~~ll~~~~~-~~-l-~---l~G~~~G~~~~~~p~l~~~~fG~~~~~~~----------------- 167 (234)
.... ..+.. .+......... .. . . +.+....+..+...+++.|.++.++.++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~ 365 (399)
T TIGR00893 286 VFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPI 365 (399)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhH
Confidence 1111 11111 11111111111 11 1 1 33333333678888899999999888752
Q ss_pred CCccccccccccHHHHH-HHHHHHHHHHHHHH
Q 038282 168 EDDLNCIGVECFKLSFI-MTAATLFSAFVSLI 198 (234)
Q Consensus 168 g~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~ 198 (234)
..|.+.|..|+|...|+ .+++.+++.++.+.
T Consensus 366 i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 366 VIGAIAATTGSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred HhhhhccCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 26677788888999999 88888777766543
No 20
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.71 E-value=3.2e-07 Score=83.20 Aligned_cols=196 Identities=17% Similarity=0.102 Sum_probs=130.8
Q ss_pred ccccCCCccccccccccCCccccCC----CCCCC-----CC-CCCCHH-----HHhccHHHHHHHHHHHHhhhhHHhHHh
Q 038282 8 NLFLGKPKSIHLMRYRSIDSKYLSG----WCQLY-----QG-EDYTIL-----QALFSMDMLILFLATICGVGGTLLAID 72 (234)
Q Consensus 8 ~l~~~~p~~~~~~~~~p~~~~~~~~----~~~~~-----~~-~~~~~~-----~~lk~~~F~~l~~~~~~~~~~~~~~~~ 72 (234)
.+++++.. ++++|++|++.+.++- +++++ ++ ++++.+ -++|||--|.+.++.++.-..=+.+..
T Consensus 195 aiival~~-~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~d 273 (448)
T COG2271 195 AIIVALIL-LFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGIND 273 (448)
T ss_pred HHHHHHHH-HHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhh
Confidence 34444444 4678999998886542 12221 11 225543 478999999999888877777667777
Q ss_pred hHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc-----c-chHHHHHHHHHH-HHHHHHHHHhhccc--hh----h
Q 038282 73 NLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF-----F-RRPLMLTIILLV-SWIGHLLIAFNVPG--GL----N 138 (234)
Q Consensus 73 ~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~-----~-gr~~~l~~~~~~-~~i~~~ll~~~~~~--~l----~ 138 (234)
..|.+..+ .|+|...+....+++=++...|.+++|| + |||..+.+.+.+ ..+++..++.+... .+ .
T Consensus 274 W~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l 353 (448)
T COG2271 274 WGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILL 353 (448)
T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHH
Confidence 88888766 6999999999999999999999999999 4 777766654444 34455555543322 22 1
Q ss_pred -hHhhhhhchhhhhHHHHHHhhCCCCCCCC------------------CCccccccccccHHHHH-HHHHHHHHHHHHHH
Q 038282 139 -IMGFNFGAQWPLVFAITSEFFGPKNHKEP------------------EDDLNCIGVECFKLSFI-MTAATLFSAFVSLI 198 (234)
Q Consensus 139 -l~G~~~G~~~~~~p~l~~~~fG~~~~~~~------------------g~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~ 198 (234)
++|+..-+-.-++-....|.-..+-.|+. ..+++-|. -+|+..|+ ..+.++++.++.+.
T Consensus 354 ~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~-~gW~g~Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 354 FIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADT-WGWDGGFIVLSIAALLAILLLLP 432 (448)
T ss_pred HHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEec-CCCcchHHHHHHHHHHHHHHHHH
Confidence 56665555455555566666666666653 13444444 67889999 88888888877766
Q ss_pred HHhhhhh
Q 038282 199 LVLMTRK 205 (234)
Q Consensus 199 l~~~~~~ 205 (234)
+...+++
T Consensus 433 ~~~~~~~ 439 (448)
T COG2271 433 VWNAEER 439 (448)
T ss_pred HHhhcch
Confidence 6544433
No 21
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.70 E-value=7.7e-08 Score=87.37 Aligned_cols=155 Identities=12% Similarity=-0.005 Sum_probs=103.3
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh----hCCChhhHHHHHHHHHHhcccccccccc----cchHHHH
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS----LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLML 115 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~----~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l 115 (234)
..+.+|+|.+|.+.+..++..........+.+.+..+ .+.+..+.+.+.++..+.+.++.+++|+ +|+++.+
T Consensus 216 ~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~ 295 (420)
T PRK09528 216 ALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNAL 295 (420)
T ss_pred HHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhh
Confidence 4568899999876654444333322233345555443 3677777889999999999999999999 7888888
Q ss_pred HHHHHHHHHHHHHHHhhccchh-h----hHhhhhhchhhhhHHHHHHhhCCCCCCCC------------------CCccc
Q 038282 116 TIILLVSWIGHLLIAFNVPGGL-N----IMGFNFGAQWPLVFAITSEFFGPKNHKEP------------------EDDLN 172 (234)
Q Consensus 116 ~~~~~~~~i~~~ll~~~~~~~l-~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~------------------g~g~~ 172 (234)
....++.+++.+++....+... + +.|++.+........++.+.++.+..++. ..|++
T Consensus 296 ~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l 375 (420)
T PRK09528 296 LLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNL 375 (420)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHH
Confidence 7777777777666654333222 2 66666666666666777888888776542 15566
Q ss_pred cccccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 173 CIGVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 173 ~d~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
.|.. +|+.+|+ .+++.++..++.+..
T Consensus 376 ~~~~-G~~~~f~~~~~~~~i~~~~~~~~ 402 (420)
T PRK09528 376 YDSI-GFQGTYLILGGIVLLFTLISVFT 402 (420)
T ss_pred HHhh-CchHHHHHHHHHHHHHHHHHHHH
Confidence 6654 4999999 787777666555443
No 22
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.70 E-value=6.2e-08 Score=88.64 Aligned_cols=126 Identities=13% Similarity=0.207 Sum_probs=96.5
Q ss_pred HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh----hH
Q 038282 70 AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN----IM 140 (234)
Q Consensus 70 ~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l~ 140 (234)
+...++.+.++.|+|..+.+.+.+...++..++++++|+ +|||+++.+..++.+++.++.....+.. ++ +.
T Consensus 42 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 121 (434)
T PRK11663 42 FNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLN 121 (434)
T ss_pred HHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 345678888999999999999999999999999999999 7999999888888887776665543322 21 67
Q ss_pred hhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCccccccccccHHHHH-HHHHHHHHHHHH
Q 038282 141 GFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDDLNCIGVECFKLSFI-MTAATLFSAFVS 196 (234)
Q Consensus 141 G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~~g~Y~~~f~-~a~~~~va~~l~ 196 (234)
|++.|..++....++.+.|..++.++. ..+.+.+ ..+|+..|+ .+.+.++.+++.
T Consensus 122 g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~-~~gw~~~f~~~~i~~~~~~~~~ 194 (434)
T PRK11663 122 AFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL-HYGWRYGMMIAGIIAIVVGLFL 194 (434)
T ss_pred HHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHHHHHH
Confidence 888998888899999999998887763 1333333 346999998 766655554443
No 23
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.69 E-value=3.9e-07 Score=83.42 Aligned_cols=151 Identities=15% Similarity=0.021 Sum_probs=94.8
Q ss_pred HhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHH-hhCCChhhHHHHHHHHHHhcccccccccc----c--c-hHHHHHHH
Q 038282 47 ALFSMDMLILFLATICGVGGTLLAIDNLRQIGT-SLGYPKRGISTFVSLVNIWNCLGRVVSGF----F--R-RPLMLTII 118 (234)
Q Consensus 47 ~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~-~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~--g-r~~~l~~~ 118 (234)
.+|++.+|.+.+..++.......+..+++++.+ +.|++..+++...+++.+++.+|++++|+ + + |+......
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~ 318 (434)
T PRK11663 239 VLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIF 318 (434)
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHH
Confidence 677899998877666555444445567888885 47999999999999999999999999999 3 2 12222221
Q ss_pred HHHHHHHHHH-HHhhccch--hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCccccc
Q 038282 119 LLVSWIGHLL-IAFNVPGG--LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDDLNCI 174 (234)
Q Consensus 119 ~~~~~i~~~l-l~~~~~~~--l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d 174 (234)
.+...++... +..+.... .+ ..|++..+........++|.++.++.+.. ..|++.|
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~ 398 (434)
T PRK11663 319 AAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLE 398 (434)
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 1111111111 11122111 11 33332222333455677899998888762 2556677
Q ss_pred cccccHHHHH-HHHHHHHHHHHHHH
Q 038282 175 GVECFKLSFI-MTAATLFSAFVSLI 198 (234)
Q Consensus 175 ~~g~Y~~~f~-~a~~~~va~~l~l~ 198 (234)
..| |+..|+ .++++++++++.+.
T Consensus 399 ~~g-~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 399 IWH-WTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred hcc-cHHHHHHHHHHHHHHHHHHHH
Confidence 665 999999 88887777665543
No 24
>PRK10504 putative transporter; Provisional
Probab=98.67 E-value=1.2e-07 Score=87.14 Aligned_cols=148 Identities=13% Similarity=0.099 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHH
Q 038282 51 MDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGH 126 (234)
Q Consensus 51 ~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~ 126 (234)
+.+|.+++..++.......+...++.+.++.|.++.+.+++.+...++..++.+++|+ +|||+.+....++.+++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~ 89 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGS 89 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 3678888777776655555667889999999999999999999999999999999998 899998887777777666
Q ss_pred HHHHhhccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---CccccccccccHHHHH
Q 038282 127 LLIAFNVPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECFKLSFI 184 (234)
Q Consensus 127 ~ll~~~~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y~~~f~ 184 (234)
++.....+.. ++ +.|++.|...+...+++.|.+..++.++. + ++.+.+. .+|+..|+
T Consensus 90 ~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~-~gw~~~f~ 168 (471)
T PRK10504 90 LFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY-ASWHWIFL 168 (471)
T ss_pred HHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh-ccHHHHHH
Confidence 5544433222 22 88999999999999999999998876642 1 3333333 46999999
Q ss_pred -HHHHHHHHHHHHHHH
Q 038282 185 -MTAATLFSAFVSLIL 199 (234)
Q Consensus 185 -~a~~~~va~~l~l~l 199 (234)
...++.++.++....
T Consensus 169 ~~~~~~~l~~~~~~~~ 184 (471)
T PRK10504 169 INIPVGIIGAIATLML 184 (471)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 777777776665544
No 25
>PRK03545 putative arabinose transporter; Provisional
Probab=98.66 E-value=3e-07 Score=82.60 Aligned_cols=127 Identities=11% Similarity=0.151 Sum_probs=97.2
Q ss_pred HhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh----hHh
Q 038282 71 IDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN----IMG 141 (234)
Q Consensus 71 ~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l~G 141 (234)
...++++.++.|.|+.+.+...+...++..++.+.+|+ +|||+.+....++.+++.++.....+.. ++ +.|
T Consensus 29 ~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G 108 (390)
T PRK03545 29 VGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIA 108 (390)
T ss_pred HcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 34578889999999999999999999999999999998 8999999998888888776665544332 22 778
Q ss_pred hhhhchhhhhHHHHHHhhCCCCCCCC--------------C---CccccccccccHHHHH-HHHHHHHHHHHHHH
Q 038282 142 FNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECFKLSFI-MTAATLFSAFVSLI 198 (234)
Q Consensus 142 ~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~ 198 (234)
++.+..++...+++.|.+..++.++. + .+.+. ...+|+.+|+ .+.++++..++...
T Consensus 109 ~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~-~~~gw~~~f~~~~~~~~l~~~~~~~ 182 (390)
T PRK03545 109 FAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIG-QYLGWRTTFLAIGGGALITLLLLIK 182 (390)
T ss_pred HHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHH-HHhcHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888889999999998888763 1 22221 2347999998 77777666555443
No 26
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.65 E-value=4.3e-08 Score=86.05 Aligned_cols=128 Identities=16% Similarity=0.240 Sum_probs=96.8
Q ss_pred hhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccchh-h----hHhh
Q 038282 72 DNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGGL-N----IMGF 142 (234)
Q Consensus 72 ~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~l-~----l~G~ 142 (234)
...+.+.++.|.|+.+.+.+.++..++..++.+++|+ +|||+++....++.+++.++.....+... + +.|+
T Consensus 16 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 95 (379)
T TIGR00881 16 LAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGI 95 (379)
T ss_pred hhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 3456667778999999999999999999999999999 79999999888888887777665444322 1 8899
Q ss_pred hhhchhhhhHHHHHHhhCCCCCCCC----------C---Cc----cccccccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 143 NFGAQWPLVFAITSEFFGPKNHKEP----------E---DD----LNCIGVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 143 ~~G~~~~~~p~l~~~~fG~~~~~~~----------g---~g----~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
+.|...+...+++.|.+..++.++. | +. .......+|+..|+ .+.+.++..++.+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (379)
T TIGR00881 96 FQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLL 170 (379)
T ss_pred hccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhee
Confidence 9999999999999999998887753 1 11 11223457888888 776666655555443
No 27
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.64 E-value=2.3e-07 Score=84.03 Aligned_cols=124 Identities=13% Similarity=0.228 Sum_probs=97.3
Q ss_pred hHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh----h
Q 038282 69 LAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN----I 139 (234)
Q Consensus 69 ~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l 139 (234)
.+...++++.++.|.++.+.+..+++..++..++++++|+ +|||+++....++.+++.++.....+.. ++ +
T Consensus 38 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 117 (394)
T PRK10213 38 LPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRAC 117 (394)
T ss_pred HHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHH
Confidence 3455788899999999999999999999999999999998 8999999999998888776665543332 22 8
Q ss_pred HhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---CccccccccccHHHHH-HHHHHHHHH
Q 038282 140 MGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECFKLSFI-MTAATLFSA 193 (234)
Q Consensus 140 ~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y~~~f~-~a~~~~va~ 193 (234)
.|++.|...+..++++.|++..|+.++. + ++.+.+ .-+|+..|+ .+.++++..
T Consensus 118 ~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~-~~gw~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 118 LGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGE-LIGWRNVFNAAAVMGVLCI 188 (394)
T ss_pred HHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHH
Confidence 8999999999999999999998887753 1 333332 246899998 665555443
No 28
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.63 E-value=9.3e-08 Score=84.65 Aligned_cols=119 Identities=13% Similarity=0.095 Sum_probs=87.9
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----c-chHHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----F-RRPLMLTI 117 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~-gr~~~l~~ 117 (234)
+.++.+|+|.+|.+.+..++.......+..+++.+.++.|.+..+++.+.++.+++..++++++|+ + +|++.+..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~ 268 (355)
T TIGR00896 189 TPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAV 268 (355)
T ss_pred CCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHH
Confidence 456789999999877666555555555667888898889999999999999999999999999999 4 45666666
Q ss_pred HHHHHHHHHHHHHhhcc-ch-hh--hHhhhhhchhhhhHHHHHHhhCC
Q 038282 118 ILLVSWIGHLLIAFNVP-GG-LN--IMGFNFGAQWPLVFAITSEFFGP 161 (234)
Q Consensus 118 ~~~~~~i~~~ll~~~~~-~~-l~--l~G~~~G~~~~~~p~l~~~~fG~ 161 (234)
..++.+++.+++..... .. .+ ++|++.|..++...+.+.+....
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~ 316 (355)
T TIGR00896 269 LAVLQLVGLCGLLFAPMHGLWAWALVLGLGQGGAFPLALTLIGLRSRQ 316 (355)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhHhHHHHHHHHHhccC
Confidence 66666666555544222 12 23 88999999998877776655443
No 29
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.63 E-value=1.7e-07 Score=85.27 Aligned_cols=127 Identities=10% Similarity=0.086 Sum_probs=97.0
Q ss_pred hhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh----hHhh
Q 038282 72 DNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN----IMGF 142 (234)
Q Consensus 72 ~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l~G~ 142 (234)
...+.+.+|.|.++.+.+.+.++..++..++.+..|+ +|||+.+....++.+++.++.....+.. ++ +.|+
T Consensus 29 ~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 108 (412)
T TIGR02332 29 FAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGI 108 (412)
T ss_pred HHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 3455667889999999999999999999999999998 8999999888888887777666544432 32 8899
Q ss_pred hhhchhhhhHHHHHHhhCCCCCCCC--------------C---Cccccc-----cccccHHHHH-HHHHHHHHHHHHHH
Q 038282 143 NFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCI-----GVECFKLSFI-MTAATLFSAFVSLI 198 (234)
Q Consensus 143 ~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d-----~~g~Y~~~f~-~a~~~~va~~l~l~ 198 (234)
+.|+..+....++.|.|..++.++. + ++++.+ ...+|+.+|+ .+...++.+++..+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~ 187 (412)
T TIGR02332 109 AEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWF 187 (412)
T ss_pred HHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhh
Confidence 9999998888899999998887763 1 222222 1348999999 77776665554443
No 30
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.61 E-value=5e-07 Score=84.09 Aligned_cols=147 Identities=9% Similarity=0.092 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHhhhhHHhHHhhHHHHHHh---hCCChhhHHHHHHHHHHhcccccccccc-----cchHHHHHHHHHHH
Q 038282 51 MDMLILFLATICGVGGTLLAIDNLRQIGTS---LGYPKRGISTFVSLVNIWNCLGRVVSGF-----FRRPLMLTIILLVS 122 (234)
Q Consensus 51 ~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~---~G~s~~~aa~~~si~~i~~~vGRl~~G~-----~gr~~~l~~~~~~~ 122 (234)
+.+|.+++..++.....+.+...++.+.++ .|+++.+++.+++...+...++++++|+ +|||+++....++.
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~ 89 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVL 89 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHH
Confidence 346777777777666766677888888775 6999999999999999999999999998 59999999999998
Q ss_pred HHHHHHHHhhccch-hh----hHhhhhhchhhhhHHHHHHhhCCCC---CCCC--------------C---Ccccccccc
Q 038282 123 WIGHLLIAFNVPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKN---HKEP--------------E---DDLNCIGVE 177 (234)
Q Consensus 123 ~i~~~ll~~~~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~---~~~~--------------g---~g~~~d~~g 177 (234)
+++.+++....+.. ++ +.|++.|...+..++++++.|..++ .++. | .+++.+. -
T Consensus 90 ~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~-~ 168 (475)
T TIGR00924 90 MLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAEN-Y 168 (475)
T ss_pred HHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHh-c
Confidence 88887776643322 22 7899999999999999999998754 2221 1 3344333 3
Q ss_pred ccHHHHH-HHHHHHHHHHHHHH
Q 038282 178 CFKLSFI-MTAATLFSAFVSLI 198 (234)
Q Consensus 178 ~Y~~~f~-~a~~~~va~~l~l~ 198 (234)
+|+..|+ .+...+++.+..+.
T Consensus 169 g~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 169 GYHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred ChHHHHHHHHHHHHHHHHHHHH
Confidence 5999999 77666665544443
No 31
>PRK03699 putative transporter; Provisional
Probab=98.61 E-value=2.6e-07 Score=83.32 Aligned_cols=146 Identities=9% Similarity=0.052 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHH
Q 038282 52 DMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHL 127 (234)
Q Consensus 52 ~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ 127 (234)
-+|..++.+++.......+-..++++.++.|+|+.+.+...+...++..++.+++|+ +|||+++....++.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~ 87 (394)
T PRK03699 8 LTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVA 87 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 355555555544443333445688899999999999999999999999999999999 7999998888888777776
Q ss_pred HHHhhccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC----------C-------CccccccccccHHHHH-
Q 038282 128 LIAFNVPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP----------E-------DDLNCIGVECFKLSFI- 184 (234)
Q Consensus 128 ll~~~~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~----------g-------~g~~~d~~g~Y~~~f~- 184 (234)
+.....+.. ++ +.|++.|...+...+++.+.+..++.+.. + .+...+...+|+..|+
T Consensus 88 l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~ 167 (394)
T PRK03699 88 GLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYAC 167 (394)
T ss_pred HHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 666543322 21 78999998888889999999987766542 1 2233344568999998
Q ss_pred HHHHHHHHHHHHH
Q 038282 185 MTAATLFSAFVSL 197 (234)
Q Consensus 185 ~a~~~~va~~l~l 197 (234)
.+.+.++..++.+
T Consensus 168 ~~~~~~~~~~~~~ 180 (394)
T PRK03699 168 IGLVYVAIFILTL 180 (394)
T ss_pred HHHHHHHHHHHHH
Confidence 7776666554443
No 32
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.61 E-value=6.5e-07 Score=79.64 Aligned_cols=97 Identities=15% Similarity=0.228 Sum_probs=80.4
Q ss_pred HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh----hH
Q 038282 70 AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN----IM 140 (234)
Q Consensus 70 ~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l~ 140 (234)
.....+.+.++.|.|+.+.+.+.++..++..++.+++|+ +|||+.+....++.+++.++.....+.. ++ +.
T Consensus 31 ~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 110 (405)
T TIGR00891 31 VALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVI 110 (405)
T ss_pred HHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 344567778889999999999999999999999999999 8999998888887777776665543322 22 88
Q ss_pred hhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 141 GFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 141 G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
|++.|...+...+++.|.+..++.++
T Consensus 111 G~~~~~~~~~~~~~i~~~~~~~~~~~ 136 (405)
T TIGR00891 111 GIGMGGEYGSSAAYVIESWPKHLRNK 136 (405)
T ss_pred HhhhhhhhHHHHHHHHHhCChhhhhH
Confidence 99999999999999999999888776
No 33
>PRK10054 putative transporter; Provisional
Probab=98.58 E-value=3.2e-07 Score=83.06 Aligned_cols=146 Identities=10% Similarity=0.065 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHhhhhHHhHHhhHHHHHH-hhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHH
Q 038282 51 MDMLILFLATICGVGGTLLAIDNLRQIGT-SLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIG 125 (234)
Q Consensus 51 ~~F~~l~~~~~~~~~~~~~~~~~~~~~~~-~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~ 125 (234)
+++|.+.+..++...........++.+.+ +.|+|+.+.+.+.++..+...+++++.|+ +|||+++.+..++.+++
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~ 86 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASG 86 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHH
Confidence 45788777777766555556667777765 57999999999999999999999999999 79999888888777777
Q ss_pred HHHHHhhccchh-h----hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---CccccccccccHHHH
Q 038282 126 HLLIAFNVPGGL-N----IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECFKLSF 183 (234)
Q Consensus 126 ~~ll~~~~~~~l-~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y~~~f 183 (234)
.+++.+..+... + +.|.+.+...+...+...|.++.++.++. + ++.+.+ .+|+.+|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~--~g~~~~f 164 (395)
T PRK10054 87 FIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM--QSINLPF 164 (395)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccCcHH
Confidence 666655333222 1 55666666677788888899888776652 1 334332 4688999
Q ss_pred H-HHHHHHHHHHHHHH
Q 038282 184 I-MTAATLFSAFVSLI 198 (234)
Q Consensus 184 ~-~a~~~~va~~l~l~ 198 (234)
+ .+.+.+++.++...
T Consensus 165 ~~~~~~~~i~~i~~~~ 180 (395)
T PRK10054 165 WLAAICSAFPLVFIQI 180 (395)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9 77777776555443
No 34
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.58 E-value=7.2e-07 Score=80.07 Aligned_cols=149 Identities=11% Similarity=-0.074 Sum_probs=101.7
Q ss_pred CCHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 42 YTILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 42 ~~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
.+.++.+|+|.+|.+.+..++..........+.+.+.++.|.++.+.+.+.++..+...+++++.|+ +++++.+..
T Consensus 196 ~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~ 275 (382)
T PRK11128 196 PAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLL 275 (382)
T ss_pred chHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 4678999999999877766665544444556778888889999999999999999999999999998 677888887
Q ss_pred HHHHHHHHHHHHHhhccchh-h----hHhhhhhchhhhhHHHHHHhhCCCCCCCC------------------CCccccc
Q 038282 118 ILLVSWIGHLLIAFNVPGGL-N----IMGFNFGAQWPLVFAITSEFFGPKNHKEP------------------EDDLNCI 174 (234)
Q Consensus 118 ~~~~~~i~~~ll~~~~~~~l-~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~------------------g~g~~~d 174 (234)
..+..+++.+++....+... + +.|+++|...+....++.+.- .++.++. .+|.++|
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~ 354 (382)
T PRK11128 276 SAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAARP-GSEVIRLQALYSALAMGGSIAIMTVLSGFLYQ 354 (382)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777665544333222 2 667777766665555555543 2222321 1566777
Q ss_pred cccccHHHHH-HHHHHHHHH
Q 038282 175 GVECFKLSFI-MTAATLFSA 193 (234)
Q Consensus 175 ~~g~Y~~~f~-~a~~~~va~ 193 (234)
..|. ..|+ .+++.+++.
T Consensus 355 ~~g~--~~~~~~~~~~~~~~ 372 (382)
T PRK11128 355 HLGA--GVFWVMALVALPAL 372 (382)
T ss_pred hccH--HHHHHHHHHHHHHH
Confidence 6654 3566 665555443
No 35
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.58 E-value=4.1e-07 Score=80.57 Aligned_cols=148 Identities=12% Similarity=0.101 Sum_probs=106.5
Q ss_pred cHHHHHHHHHHHHhhhhH-HhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHH
Q 038282 50 SMDMLILFLATICGVGGT-LLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWI 124 (234)
Q Consensus 50 ~~~F~~l~~~~~~~~~~~-~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i 124 (234)
+++++.....+.+....+ .......+.+.++.|.|+.+.+.+.++..++..++.+++|+ +|||+.+....++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~ 82 (385)
T TIGR00710 3 AKAFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFAL 82 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 444554444443333233 33445678888899999999999999999999999999998 8999999888888777
Q ss_pred HHHHHHhhccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---CccccccccccHHH
Q 038282 125 GHLLIAFNVPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECFKLS 182 (234)
Q Consensus 125 ~~~ll~~~~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y~~~ 182 (234)
+.++.....+.. ++ +.|++.+...+...+++.|.+..++.++. + .+.+.+ ..+|+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~~~~~~ 161 (385)
T TIGR00710 83 SSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILV-WLSWHAI 161 (385)
T ss_pred HHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCHHHH
Confidence 776665543322 21 88999999999999999999998877652 1 233222 3468888
Q ss_pred HH-HHHHHHHHHHHHHH
Q 038282 183 FI-MTAATLFSAFVSLI 198 (234)
Q Consensus 183 f~-~a~~~~va~~l~l~ 198 (234)
|+ .+...++..++.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 162 FAFLSLAGILLSALIFF 178 (385)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88 77776666665544
No 36
>PRK09952 shikimate transporter; Provisional
Probab=98.57 E-value=7.2e-07 Score=81.85 Aligned_cols=156 Identities=15% Similarity=0.116 Sum_probs=104.3
Q ss_pred HHHhccHHHHHHHHHHH-HhhhhHHhHHhhHHHHHH-hhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHH
Q 038282 45 LQALFSMDMLILFLATI-CGVGGTLLAIDNLRQIGT-SLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTII 118 (234)
Q Consensus 45 ~~~lk~~~F~~l~~~~~-~~~~~~~~~~~~~~~~~~-~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~ 118 (234)
+..+|++++|....... +.....+.+..+.+++.+ +.|.++.....+..+.++...++.+++|+ +|||+.+...
T Consensus 243 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~ 322 (438)
T PRK09952 243 EALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITG 322 (438)
T ss_pred HHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 34778888887654333 333333445567777765 46888877666666778888889999998 7888887766
Q ss_pred HHHHHHHHHHHHh---hcc-chh-h----hHhhhhhchhhhhHHHHHHhhCCCCCCCC------------------CCcc
Q 038282 119 LLVSWIGHLLIAF---NVP-GGL-N----IMGFNFGAQWPLVFAITSEFFGPKNHKEP------------------EDDL 171 (234)
Q Consensus 119 ~~~~~i~~~ll~~---~~~-~~l-~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~------------------g~g~ 171 (234)
.++.+++.+.+.. ..+ ... . +.+++.|...+..+++++|.|+.++.+.. ..++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~ 402 (438)
T PRK09952 323 ALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAA 402 (438)
T ss_pred HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 6555444332222 111 111 1 55788888888899999999999876531 1345
Q ss_pred ccccc-cccHHHHH-HHHHHHHHHHHHHHHH
Q 038282 172 NCIGV-ECFKLSFI-MTAATLFSAFVSLILV 200 (234)
Q Consensus 172 ~~d~~-g~Y~~~f~-~a~~~~va~~l~l~l~ 200 (234)
+.|.+ ++|...++ .+++++++.+..+.++
T Consensus 403 l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~ 433 (438)
T PRK09952 403 LVTYFGGSWHSVAIYLLAGCLISAMTALLMK 433 (438)
T ss_pred HHHhcCCCchHHHHHHHHHHHHHHHHHHHcc
Confidence 55644 57999888 8888888877776554
No 37
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.56 E-value=9.9e-07 Score=82.09 Aligned_cols=160 Identities=8% Similarity=0.048 Sum_probs=99.9
Q ss_pred CCHHHHhcc-HHHHHHHHHH-HHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHH
Q 038282 42 YTILQALFS-MDMLILFLAT-ICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLM 114 (234)
Q Consensus 42 ~~~~~~lk~-~~F~~l~~~~-~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~ 114 (234)
.+.++.+++ ++.+.+.... ++.....+.+..+++++.++ .|++..++....+...++..++.+++|+ +|||+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 318 (490)
T PRK10642 239 VSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPF 318 (490)
T ss_pred CCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 456677663 3333322222 22223344456678888864 6999888888888888899999999998 899998
Q ss_pred HHHHHHHHHH-HHHHHHh-hcc-ch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CC
Q 038282 115 LTIILLVSWI-GHLLIAF-NVP-GG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP-----------------ED 169 (234)
Q Consensus 115 l~~~~~~~~i-~~~ll~~-~~~-~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~ 169 (234)
+....+...+ +..++.. ..+ .. ++ +.|++.|......+.+++++|.++..++. ..
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~ 398 (490)
T PRK10642 319 VILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLA 398 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHH
Confidence 7766554332 2222222 111 12 12 66777777778888888999999888752 13
Q ss_pred ccccccccccHHHHH-HHHHHHHHHHHHHHHHh
Q 038282 170 DLNCIGVECFKLSFI-MTAATLFSAFVSLILVL 201 (234)
Q Consensus 170 g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l~~ 201 (234)
++..+..+++..+++ ....++++.+..++++.
T Consensus 399 g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pe 431 (490)
T PRK10642 399 AWLVESTQNLMMPAYYLMVVAVIGLITGVTMKE 431 (490)
T ss_pred HHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 344555566566665 66666666666655543
No 38
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.55 E-value=4e-07 Score=81.74 Aligned_cols=135 Identities=16% Similarity=0.169 Sum_probs=93.6
Q ss_pred HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-h---h-hH
Q 038282 70 AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-L---N-IM 140 (234)
Q Consensus 70 ~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l---~-l~ 140 (234)
...+++.+.++.|.+ ..+...++.+++..+++++.|+ +++++.+.....+.+++..++....+.. . . +.
T Consensus 235 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (399)
T PRK05122 235 IATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALT 312 (399)
T ss_pred HHHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 334566666777763 3456678888899999999998 6777877777777766665555433222 1 1 78
Q ss_pred hhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCccccccccccHHHHH-HHHHHHHHHHHHHHHHhh
Q 038282 141 GFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDDLNCIGVECFKLSFI-MTAATLFSAFVSLILVLM 202 (234)
Q Consensus 141 G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l~~~ 202 (234)
|++.+..++.....+.+.++.++.++. ..|.+.|. .+|+..|+ .+++++++.++.+.++++
T Consensus 313 G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 313 GFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASW-FGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999988888877888888888877763 13444443 35999999 888888887777666555
Q ss_pred hhhhh
Q 038282 203 TRKFY 207 (234)
Q Consensus 203 ~~~~~ 207 (234)
++|..
T Consensus 392 ~~~~~ 396 (399)
T PRK05122 392 APRAV 396 (399)
T ss_pred ccccC
Confidence 55443
No 39
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.55 E-value=2.2e-07 Score=84.20 Aligned_cols=151 Identities=13% Similarity=-0.071 Sum_probs=97.9
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHH
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTII 118 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~ 118 (234)
.+..+|+|.++.+++..++.... ..+..+.+.+.++ .|.++.+.+.+.+..+++..+|+++.|+ .++++.+...
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~ 295 (417)
T PRK10489 217 FRFLLASPVVGGIALLGGLLTMA-SAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLS 295 (417)
T ss_pred HHHHHcChHHHHHHHHHHHHHHH-HhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHH
Confidence 34577888887766554443322 2344567888888 7999999999999999999999999999 2334455566
Q ss_pred HHHHHHHHHHHHhhccchh----h-hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCccccccc
Q 038282 119 LLVSWIGHLLIAFNVPGGL----N-IMGFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDDLNCIGV 176 (234)
Q Consensus 119 ~~~~~i~~~ll~~~~~~~l----~-l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~~ 176 (234)
.++.+++++++....+... . ++|++.+...+...+++.+.+..++.++. ..|.+.|..
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~ 375 (417)
T PRK10489 296 TLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMM 375 (417)
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHh
Confidence 6666666555443222221 1 67777777777777888899988877763 144555544
Q ss_pred cccHHHHH-HHHHHHHHHHHH
Q 038282 177 ECFKLSFI-MTAATLFSAFVS 196 (234)
Q Consensus 177 g~Y~~~f~-~a~~~~va~~l~ 196 (234)
| +..+++ .+++.++.+++.
T Consensus 376 g-~~~~~~~~~~~~~~~~~~~ 395 (417)
T PRK10489 376 T-PVASASASGFGLLIIGVLL 395 (417)
T ss_pred c-hhhHHHHHHHHHHHHHHHH
Confidence 4 455555 554444444444
No 40
>TIGR00895 2A0115 benzoate transport.
Probab=98.55 E-value=6.4e-07 Score=79.25 Aligned_cols=126 Identities=18% Similarity=0.119 Sum_probs=93.6
Q ss_pred HhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-h--h--hHh
Q 038282 71 IDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-L--N--IMG 141 (234)
Q Consensus 71 ~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l--~--l~G 141 (234)
....+.+.++.|.++.+.+.+.++..++..++.++.|+ +|||+.+....++.+++.++.....+.. + . +.|
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 116 (398)
T TIGR00895 37 GFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAG 116 (398)
T ss_pred HhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHh
Confidence 34567777889999999999999999999999999998 7999988888887777766665543322 2 1 889
Q ss_pred hhhhchhhhhHHHHHHhhCCCCCCCC--------------C---CccccccccccHHHHH-HHHHHHHHHHHHH
Q 038282 142 FNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECFKLSFI-MTAATLFSAFVSL 197 (234)
Q Consensus 142 ~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l 197 (234)
++.|...+...+++.|.+..++.++. + .+...+ ..+|+..|+ .+.+.++..++.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~ 189 (398)
T TIGR00895 117 LGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIP-VFGWRSLFYVGGIAPLLLLLLLM 189 (398)
T ss_pred cccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhh-cccceeehhhhhhHHHHHHHHHH
Confidence 99999999999999999998877753 1 222222 235777887 6555555544443
No 41
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.55 E-value=7.4e-07 Score=80.60 Aligned_cols=154 Identities=14% Similarity=0.013 Sum_probs=103.1
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHH-HH
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLT-II 118 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~-~~ 118 (234)
.++.+|+|.+|...+..++..........+.+.+.++.|++..+++...++..+++.+|++++|+ ++|++.+. ..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~ 294 (402)
T TIGR00897 215 ATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFG 294 (402)
T ss_pred HHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Confidence 45688999999877776665555555667888898889999999999999999999999999999 56666543 22
Q ss_pred HHHHHHHHHHHHh-h----ccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCcc
Q 038282 119 LLVSWIGHLLIAF-N----VPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDDL 171 (234)
Q Consensus 119 ~~~~~i~~~ll~~-~----~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~ 171 (234)
.+..+++.+++.. + .+.. .+ +.|++.+...+. .+.+.+. .+++.++. ..+.
T Consensus 295 ~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~gp~i~g~ 372 (402)
T TIGR00897 295 GVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPL-AAVFPTL-APKHKGAAMSVLNLSAGLSAFLAPAIAVL 372 (402)
T ss_pred HHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhh-CcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333332222221 1 1111 11 677777776554 3455565 44566652 1556
Q ss_pred ccccccccHHHHH-HHHHHHHHHHHHHHHH
Q 038282 172 NCIGVECFKLSFI-MTAATLFSAFVSLILV 200 (234)
Q Consensus 172 ~~d~~g~Y~~~f~-~a~~~~va~~l~l~l~ 200 (234)
..|..| |...|+ .+++.++++++..++|
T Consensus 373 l~~~~g-~~~~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 373 FIGFFG-AIGVVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred HHhhcc-hHHHHHHHHHHHHHHHHHHHHhc
Confidence 666654 667777 8888888888887765
No 42
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.55 E-value=3.9e-07 Score=85.01 Aligned_cols=193 Identities=16% Similarity=0.116 Sum_probs=131.8
Q ss_pred cccCCCccccccccccCCccccCCCCCC---CCCCCCCHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHH-hhCCC
Q 038282 9 LFLGKPKSIHLMRYRSIDSKYLSGWCQL---YQGEDYTILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGT-SLGYP 84 (234)
Q Consensus 9 l~~~~p~~~~~~~~~p~~~~~~~~~~~~---~~~~~~~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~-~~G~s 84 (234)
++..+|.. ++.|.||++.+.++..... -++-..++++.-|.|+...++++.++..-+...++.....+++ +.|++
T Consensus 237 ~vfsiP~~-~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s 315 (477)
T PF11700_consen 237 LVFSIPLF-LWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMS 315 (477)
T ss_pred HHHHHHHH-HhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcC
Confidence 34556664 4567776642222111000 0011235677778888888788877766555455666666666 67999
Q ss_pred hhhHHHHHHHHHHhcccccccccc----cchH--HHHHHHHHHH-HHHHHHHH---h----hccch-hh----hHhhhhh
Q 038282 85 KRGISTFVSLVNIWNCLGRVVSGF----FRRP--LMLTIILLVS-WIGHLLIA---F----NVPGG-LN----IMGFNFG 145 (234)
Q Consensus 85 ~~~aa~~~si~~i~~~vGRl~~G~----~gr~--~~l~~~~~~~-~i~~~ll~---~----~~~~~-l~----l~G~~~G 145 (234)
..+...+.-+..+..++|-+++|+ +|.| +++.+.+++. .+.+..+. . ..+.. .| ++|++.|
T Consensus 316 ~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G 395 (477)
T PF11700_consen 316 TTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMG 395 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhh
Confidence 999988888999999999999999 6666 6666555444 22332222 1 11111 12 9999999
Q ss_pred chhhhhHHHHHHhhCCCCCCCC--------------C---CccccccccccHHHHH-HHHHHHHHHHHHHHHHhh
Q 038282 146 AQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECFKLSFI-MTAATLFSAFVSLILVLM 202 (234)
Q Consensus 146 ~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l~~~ 202 (234)
+.++..=++.+++-..++-++. | .|.+-|.+|+.+..+. ..++.+++.++...+..+
T Consensus 396 ~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 396 GIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred hHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccch
Confidence 9999999999999999888874 2 5667788999999999 999999998887666543
No 43
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.55 E-value=7.4e-08 Score=84.55 Aligned_cols=127 Identities=15% Similarity=0.150 Sum_probs=96.4
Q ss_pred hhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh----hHhh
Q 038282 72 DNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN----IMGF 142 (234)
Q Consensus 72 ~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l~G~ 142 (234)
...+.+.++.|.|+.+.+.+.++..++..++.+++|+ +|||+.+....++.+++..+.....+.. ++ +.|+
T Consensus 15 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 94 (399)
T TIGR00893 15 FAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGA 94 (399)
T ss_pred HhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 3455667778999999999999999999999999999 7999998888888777776665543322 22 8899
Q ss_pred hhhchhhhhHHHHHHhhCCCCCCCC----------C-------CccccccccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 143 NFGAQWPLVFAITSEFFGPKNHKEP----------E-------DDLNCIGVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 143 ~~G~~~~~~p~l~~~~fG~~~~~~~----------g-------~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
+.|...+..+.++.|++..++.++. | .+...+ ..+|+..|+ .+.+.++..++.+..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (399)
T TIGR00893 95 AEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILI-HFSWQWAFIIEGVLGIIWGVLWLKF 168 (399)
T ss_pred HHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH-hCCchHHHHHHHHHHHHHHHHhhhe
Confidence 9999999999999999998877652 1 222222 345889998 777776666655443
No 44
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.54 E-value=6.2e-07 Score=80.39 Aligned_cols=152 Identities=15% Similarity=0.089 Sum_probs=100.9
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTII 118 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~ 118 (234)
+..+.+|+|.+|......++...........++.+.++.|.++...+..+++..++..++++..|+ +++++.+...
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~ 271 (381)
T PRK03633 192 SIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQ 271 (381)
T ss_pred CHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHH
Confidence 467789999988654433332222222345677888888999999999999999999999999998 6888877777
Q ss_pred HHHHHHHHHHHHhhccchh--h-hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---Cccccccccc
Q 038282 119 LLVSWIGHLLIAFNVPGGL--N-IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVEC 178 (234)
Q Consensus 119 ~~~~~i~~~ll~~~~~~~l--~-l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~ 178 (234)
..+.+++...+. ...... . +.|++.+...+.....+.|..+.++.+.. | .|++.|.. +
T Consensus 272 ~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~-g 349 (381)
T PRK03633 272 VFVVILGSIAML-SQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY-S 349 (381)
T ss_pred HHHHHHHHHHHh-hhHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-C
Confidence 666666554433 111111 1 66766666677777777777766554421 1 55665554 4
Q ss_pred cHHHHH-HHHHHHHHHHHH
Q 038282 179 FKLSFI-MTAATLFSAFVS 196 (234)
Q Consensus 179 Y~~~f~-~a~~~~va~~l~ 196 (234)
++..|+ .+.+.+++.++.
T Consensus 350 ~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 350 DNLLFIMIASVSFIYLLML 368 (381)
T ss_pred ccHHHHHHHHHHHHHHHHH
Confidence 888888 766666554443
No 45
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.53 E-value=7.1e-07 Score=78.71 Aligned_cols=149 Identities=15% Similarity=0.007 Sum_probs=100.0
Q ss_pred CCCHHHHhccHH--HHHHHHHHHHhhhhHHhHHhhHHHHHH-hhCCChhhHHHHHHHHHHhcccccccccc----cchHH
Q 038282 41 DYTILQALFSMD--MLILFLATICGVGGTLLAIDNLRQIGT-SLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPL 113 (234)
Q Consensus 41 ~~~~~~~lk~~~--F~~l~~~~~~~~~~~~~~~~~~~~~~~-~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~ 113 (234)
..+.++.+|+++ ++......++..........+.+.+.+ +.|.++.+.+...++..+.+.++++++|+ +|||+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 286 (394)
T TIGR00883 207 RGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRP 286 (394)
T ss_pred cCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH
Confidence 345677888876 776666555554444445567888885 46999999999999999999999999999 78888
Q ss_pred HHHHHHHHHHH-HHHHH-Hhh-cc-chh-h----hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------
Q 038282 114 MLTIILLVSWI-GHLLI-AFN-VP-GGL-N----IMGFNFGAQWPLVFAITSEFFGPKNHKEP----------------- 167 (234)
Q Consensus 114 ~l~~~~~~~~i-~~~ll-~~~-~~-~~l-~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~----------------- 167 (234)
.+.....+..+ ++.++ ... .+ ... + +.|++.|...+...+++.|.++.++.++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p 366 (394)
T TIGR00883 287 VLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAP 366 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHH
Confidence 66644433332 32222 221 12 221 1 77888888999999999999998877652
Q ss_pred -CCccccccccccHHHHH-HHHHH
Q 038282 168 -EDDLNCIGVECFKLSFI-MTAAT 189 (234)
Q Consensus 168 -g~g~~~d~~g~Y~~~f~-~a~~~ 189 (234)
..|.+.|..|.+...++ .++++
T Consensus 367 ~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 367 YIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred HHHHHHHHHcCcchhHHHHHHHHH
Confidence 13455566666666666 44433
No 46
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.52 E-value=2.1e-06 Score=78.48 Aligned_cols=159 Identities=10% Similarity=-0.017 Sum_probs=105.2
Q ss_pred CHHHHhccHHHHHHHHHHHHh-hhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHH
Q 038282 43 TILQALFSMDMLILFLATICG-VGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLT 116 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~-~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~ 116 (234)
+.++.+|++++|.+.+..++. ....+.+..+++++.++ .|.+..+.+...++..+...++.++.|+ ++||+.+.
T Consensus 234 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~ 313 (432)
T PRK10406 234 SLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSML 313 (432)
T ss_pred cHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHH
Confidence 578899999999876665543 33344455678887765 6999888888888888888888999998 78888766
Q ss_pred HHHHHHHHHHH-HHH-hh-ccc-hh-h----hHhhhhhchhhhhHHHHHHhhCCCCCCCC------------C------C
Q 038282 117 IILLVSWIGHL-LIA-FN-VPG-GL-N----IMGFNFGAQWPLVFAITSEFFGPKNHKEP------------E------D 169 (234)
Q Consensus 117 ~~~~~~~i~~~-ll~-~~-~~~-~l-~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~------------g------~ 169 (234)
...++.++... ++. .. ... .. + +.+++.+...+..+++++|+|++|+.++. + .
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~ 393 (432)
T PRK10406 314 CFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVA 393 (432)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHH
Confidence 55444332222 111 11 111 11 1 23344455556677888999999998873 1 1
Q ss_pred ccccccccccHHHHH-HHHHHHHHHHHHHHHHhh
Q 038282 170 DLNCIGVECFKLSFI-MTAATLFSAFVSLILVLM 202 (234)
Q Consensus 170 g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l~~~ 202 (234)
+ ..+.+|+|...++ .++..+++.+..++++.|
T Consensus 394 ~-~l~~~g~~~~~~~~~~~~~~i~~~~~~~l~~~ 426 (432)
T PRK10406 394 L-SLKSIGMETAFFWYVTLMAVVAFLVSLMLHRK 426 (432)
T ss_pred H-HHHHhCCCcHHHHHHHHHHHHHHHHHHHhhhc
Confidence 2 3456788888888 777777777776665443
No 47
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.52 E-value=2.3e-07 Score=81.06 Aligned_cols=147 Identities=12% Similarity=0.021 Sum_probs=105.6
Q ss_pred HHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHH
Q 038282 53 MLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLL 128 (234)
Q Consensus 53 F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~l 128 (234)
||.+++..++...........++.+..+.+.++.+.+.+.++..+...++.+++|+ +|||+.+....++..++.++
T Consensus 1 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~ 80 (365)
T TIGR00900 1 FRLLFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAV 80 (365)
T ss_pred CeehHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHH
Confidence 35556666665555444555677788889999999999999999999999999999 89999998887777666555
Q ss_pred HHhhc-----cch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---CccccccccccHH
Q 038282 129 IAFNV-----PGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECFKL 181 (234)
Q Consensus 129 l~~~~-----~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y~~ 181 (234)
..... +.. ++ +.|++.|...+...++++|++..++.++. + ++...+ ..+|+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~g~~~ 159 (365)
T TIGR00900 81 LPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYA-TLGIKW 159 (365)
T ss_pred HHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH-HhhHHH
Confidence 44322 222 22 88999999999999999999998877652 1 233322 346888
Q ss_pred HHH-HHHHHHHHHHHHHHHH
Q 038282 182 SFI-MTAATLFSAFVSLILV 200 (234)
Q Consensus 182 ~f~-~a~~~~va~~l~l~l~ 200 (234)
.|+ .+...+++.++.+.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~ 179 (365)
T TIGR00900 160 AIWVDAVGFAISALLIVSVR 179 (365)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 888 6666666655544443
No 48
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.51 E-value=3.1e-07 Score=83.14 Aligned_cols=117 Identities=15% Similarity=0.160 Sum_probs=95.6
Q ss_pred cHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHH
Q 038282 50 SMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIG 125 (234)
Q Consensus 50 ~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~ 125 (234)
+|.||.+++..++............+++.++.|.++.+.+++.+...+..++..+++|+ +|||+++..+.++.+++
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~ 81 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLG 81 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHH
Confidence 46789888888887765555566677788899999999999999999999999999999 89999999988888776
Q ss_pred HHHHHhhccchh-h-hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 126 HLLIAFNVPGGL-N-IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 126 ~~ll~~~~~~~l-~-l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
.++.....+..+ . +.|++.|...+...++++|+++.++.++
T Consensus 82 ~~~~~~~~~~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~ 124 (393)
T PRK11195 82 CLLMLFGIHPLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVK 124 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 655443222222 2 8899999999999999999999998876
No 49
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.50 E-value=2e-06 Score=80.63 Aligned_cols=155 Identities=12% Similarity=0.087 Sum_probs=108.3
Q ss_pred CHHHHhccHH-HHHHHHHHHHhhhhHHhHHhhHHHHH-HhhCCChhhHHHHHHHHHHhcccccccccc-----cchHHHH
Q 038282 43 TILQALFSMD-MLILFLATICGVGGTLLAIDNLRQIG-TSLGYPKRGISTFVSLVNIWNCLGRVVSGF-----FRRPLML 115 (234)
Q Consensus 43 ~~~~~lk~~~-F~~l~~~~~~~~~~~~~~~~~~~~~~-~~~G~s~~~aa~~~si~~i~~~vGRl~~G~-----~gr~~~l 115 (234)
-..+.+|+|+ +|.++...++.....+.+...++.+. ++.|+++.+++.+.+..........+++|+ +|||+.+
T Consensus 12 ~~~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~ 91 (500)
T PRK09584 12 VSLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVI 91 (500)
T ss_pred CChhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH
Confidence 3355668875 88888777777766666667788877 457999998888777766555555567787 4999999
Q ss_pred HHHHHHHHHHHHHHHhhcc-ch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCC--CC-----------------CCc
Q 038282 116 TIILLVSWIGHLLIAFNVP-GG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHK--EP-----------------EDD 170 (234)
Q Consensus 116 ~~~~~~~~i~~~ll~~~~~-~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~--~~-----------------g~g 170 (234)
....++.+++.+++..... .. ++ +.|++.|...+..++++++.|..++.. .. ..+
T Consensus 92 ~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g 171 (500)
T PRK09584 92 MLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATP 171 (500)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHH
Confidence 9988888888776665422 22 22 789999998999999999999754322 11 144
Q ss_pred cccccccccHHHHH-HHHHHHHHHHHHHH
Q 038282 171 LNCIGVECFKLSFI-MTAATLFSAFVSLI 198 (234)
Q Consensus 171 ~~~d~~g~Y~~~f~-~a~~~~va~~l~l~ 198 (234)
++.|. .+|+..|+ .++..+++.+..+.
T Consensus 172 ~l~~~-~g~~~~F~i~~i~~~i~~i~~~~ 199 (500)
T PRK09584 172 WLAAK-YGWSVAFALSVVGMLITVVNFAF 199 (500)
T ss_pred HHHHh-hCHHHHHHHHHHHHHHHHHHHHH
Confidence 44443 46999999 77655655544433
No 50
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.49 E-value=1.1e-06 Score=77.58 Aligned_cols=154 Identities=14% Similarity=0.105 Sum_probs=101.2
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHH-hhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGT-SLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~-~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
+.++.++++++|.++...++............+.+.+ +.|.++.+.+.+.++..+...+++++.|+ ++||+.+..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~ 270 (375)
T TIGR00899 191 EVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLL 270 (375)
T ss_pred hhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHH
Confidence 3455788888887666555443333333445666654 57999998888888877788888899998 688887776
Q ss_pred HHHHHHHHHHHHHhhccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCcccccc
Q 038282 118 ILLVSWIGHLLIAFNVPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDDLNCIG 175 (234)
Q Consensus 118 ~~~~~~i~~~ll~~~~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~ 175 (234)
..++..+...++....+.. .+ +.|++.|...+.....+.|.+..++ ++. ..|.+.|.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~g~~~~~ 349 (375)
T TIGR00899 271 AALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGRA-GAATTLYTNTGRVGWIIAGSVGGILAER 349 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchh-hHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6655544443333322222 21 6788888888888888888887543 432 14444443
Q ss_pred ccccHHHHH-HHHHHHHHHHHHHH
Q 038282 176 VECFKLSFI-MTAATLFSAFVSLI 198 (234)
Q Consensus 176 ~g~Y~~~f~-~a~~~~va~~l~l~ 198 (234)
.+|+..|+ .+++.+++.++.+.
T Consensus 350 -~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 350 -WSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred -ccchhHHHHHHHHHHHHHHHHhe
Confidence 36999999 88877777776544
No 51
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.49 E-value=1.5e-07 Score=81.98 Aligned_cols=137 Identities=22% Similarity=0.264 Sum_probs=100.9
Q ss_pred HHHHhhhhHHhHHhhHH-HHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhc
Q 038282 59 ATICGVGGTLLAIDNLR-QIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNV 133 (234)
Q Consensus 59 ~~~~~~~~~~~~~~~~~-~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~ 133 (234)
..++...........++ .+.++.|.|+.+.+.+.++..+...++.+++|+ +|||+++....++.+++.++..++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~ 83 (352)
T PF07690_consen 4 AFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFAS 83 (352)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhh
Confidence 33443333333445566 677788999999999999999999999999999 7999999998888888844444433
Q ss_pred cchh-h----hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---CccccccccccHHHHH-HHHHHH
Q 038282 134 PGGL-N----IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECFKLSFI-MTAATL 190 (234)
Q Consensus 134 ~~~l-~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y~~~f~-~a~~~~ 190 (234)
+... + +.|++.+...+...+++.|.+..++.++. + ++.+. ...+|+.+|+ .+++.+
T Consensus 84 ~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~-~~~~~~~~~~~~~~~~~ 162 (352)
T PF07690_consen 84 NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLI-SYFGWRWAFLISAILSL 162 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHCHHCCHHHHHHHHHH
T ss_pred hHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhh-hccccccccccccchhh
Confidence 3222 2 88999999999999999999999888753 1 33333 3345888898 888888
Q ss_pred HHHHHH
Q 038282 191 FSAFVS 196 (234)
Q Consensus 191 va~~l~ 196 (234)
++.++.
T Consensus 163 ~~~il~ 168 (352)
T PF07690_consen 163 IAAILF 168 (352)
T ss_dssp HHHHHH
T ss_pred hhhhhH
Confidence 877643
No 52
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.48 E-value=1.1e-06 Score=77.43 Aligned_cols=114 Identities=19% Similarity=0.229 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHhhhhHHhHHhhHHH-HHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHH
Q 038282 52 DMLILFLATICGVGGTLLAIDNLRQ-IGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGH 126 (234)
Q Consensus 52 ~F~~l~~~~~~~~~~~~~~~~~~~~-~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~ 126 (234)
.||..++.+++............+. +.++.|+|+.+.+.+.++..++..++.+++|+ +|||+.+....++.+++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPC 81 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 5777777776655555555566774 67789999999999999999999999999999 899999999888888887
Q ss_pred HHHHhhc-cch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 127 LLIAFNV-PGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 127 ~ll~~~~-~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
++..... +.. ++ +.|++.+ .+....+++++.+..++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~ 126 (366)
T TIGR00886 82 LWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGT 126 (366)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhH
Confidence 7766544 322 21 6787754 45556788999998887765
No 53
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.47 E-value=3.5e-06 Score=77.14 Aligned_cols=158 Identities=11% Similarity=0.016 Sum_probs=96.8
Q ss_pred HHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchH-HHHHHH-
Q 038282 46 QALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRP-LMLTII- 118 (234)
Q Consensus 46 ~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~-~~l~~~- 118 (234)
+.+|++.+|.+.+..++..........+.+.+.++ .|.++.+++...++.++.+.+|++++|+ ++++ +.....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~ 325 (438)
T TIGR00712 246 YVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVF 325 (438)
T ss_pred HHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHH
Confidence 47899999998776666555545566788899887 5999999999999999999999999999 3222 222211
Q ss_pred HH-HHHHHHHHHHhh-ccc-h-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC----------C--------Cccc
Q 038282 119 LL-VSWIGHLLIAFN-VPG-G-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP----------E--------DDLN 172 (234)
Q Consensus 119 ~~-~~~i~~~ll~~~-~~~-~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~----------g--------~g~~ 172 (234)
.. ...++.+++... ... . .+ +.|++..+........+.|.++.++.++. + .|.+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l 405 (438)
T TIGR00712 326 FMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYT 405 (438)
T ss_pred HHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHH
Confidence 11 112222222221 111 1 11 33433222222223456788988887753 1 2333
Q ss_pred cccccccHHHHH-HHHHHHHHHHHHHHHHhhhh
Q 038282 173 CIGVECFKLSFI-MTAATLFSAFVSLILVLMTR 204 (234)
Q Consensus 173 ~d~~g~Y~~~f~-~a~~~~va~~l~l~l~~~~~ 204 (234)
.|.. +|+.+|+ .++..+++.+..+.+.+++|
T Consensus 406 ~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 406 VDFF-GWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred HHhc-cchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4443 4999999 88888888777766654433
No 54
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.47 E-value=8.4e-07 Score=80.57 Aligned_cols=79 Identities=11% Similarity=-0.096 Sum_probs=64.4
Q ss_pred HHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHH
Q 038282 45 LQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIIL 119 (234)
Q Consensus 45 ~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~ 119 (234)
....|+|+||.+++..++...+.......++.+.++ .|+|..+.+.+.++..+...++++++|+ +|||+.+.+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~ 83 (420)
T PRK09528 4 MYYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWII 83 (420)
T ss_pred chhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 457789999998887777665554566777777776 7999999999999999999999999999 78898877655
Q ss_pred HHHH
Q 038282 120 LVSW 123 (234)
Q Consensus 120 ~~~~ 123 (234)
.+.+
T Consensus 84 ~~~~ 87 (420)
T PRK09528 84 SGLL 87 (420)
T ss_pred HHHH
Confidence 4443
No 55
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.47 E-value=2.5e-06 Score=77.88 Aligned_cols=142 Identities=13% Similarity=0.081 Sum_probs=106.1
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhh--CCChhhHHHHHHHHHHhcccccccccc----cchHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSL--GYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLT 116 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~--G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~ 116 (234)
+.++.+|+|.++...+..++..+....+..+++++.++. +.++..++...+.......+||++.|+ +++++.+.
T Consensus 224 ~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~ 303 (410)
T TIGR00885 224 SLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLM 303 (410)
T ss_pred hHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 456889999999988888887777766778899998876 455556666777777788999999999 67777777
Q ss_pred HHHHHHHHHHHHHHhhcc-chh--h-hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------C-------Cccccccc-
Q 038282 117 IILLVSWIGHLLIAFNVP-GGL--N-IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------E-------DDLNCIGV- 176 (234)
Q Consensus 117 ~~~~~~~i~~~ll~~~~~-~~l--~-l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------g-------~g~~~d~~- 176 (234)
+..+..++.+++.....+ ..+ + +.|++.+..++.+-++..+..|.+..... | .|.+.|..
T Consensus 304 i~~~~~~~~~ll~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~~Gga~~p~l~G~~~d~~~ 383 (410)
T TIGR00885 304 AYAIIGMALCLGSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAIIGGGIVPPLQGFIIDMKE 383 (410)
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHhccchHHHHHHHHHHHhc
Confidence 777777766666655333 223 3 88999999999999999999997775421 1 55666743
Q ss_pred ----cccHHHHH
Q 038282 177 ----ECFKLSFI 184 (234)
Q Consensus 177 ----g~Y~~~f~ 184 (234)
|+|+.+|+
T Consensus 384 ~~~~~~~~~~~~ 395 (410)
T TIGR00885 384 IAAAPAVNTSFI 395 (410)
T ss_pred ccccCccchHHH
Confidence 57888887
No 56
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.46 E-value=5.1e-07 Score=82.64 Aligned_cols=126 Identities=13% Similarity=0.171 Sum_probs=93.1
Q ss_pred HHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhc---cc-h-hh----hH
Q 038282 74 LRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNV---PG-G-LN----IM 140 (234)
Q Consensus 74 ~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~---~~-~-l~----l~ 140 (234)
..+..++.|+|+.+.+...++..++..++.+++|+ +|||+.+....++.+++.++..... +. . ++ +.
T Consensus 49 ~~p~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 128 (438)
T TIGR00712 49 AMPYLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLN 128 (438)
T ss_pred hhHHHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHH
Confidence 34555667999999999999999999999999999 7999888887777777665554321 11 1 11 77
Q ss_pred hhhhhchhhhhHHHHHHhhCCCCCCCC----------C-------CccccccccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 141 GFNFGAQWPLVFAITSEFFGPKNHKEP----------E-------DDLNCIGVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 141 G~~~G~~~~~~p~l~~~~fG~~~~~~~----------g-------~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
|++.|..++.....+.|+|..++.++. + .+...+...+|+.+|+ .+.++++..++.++.
T Consensus 129 g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~ 205 (438)
T TIGR00712 129 GWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAM 205 (438)
T ss_pred HHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 888888888888899999998888763 1 1122334568999999 788777766555444
No 57
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.45 E-value=1.8e-06 Score=77.66 Aligned_cols=124 Identities=18% Similarity=0.148 Sum_probs=92.5
Q ss_pred hhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh----hHhh
Q 038282 72 DNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN----IMGF 142 (234)
Q Consensus 72 ~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l~G~ 142 (234)
...+.+.++.|.|+.+.+.+.+...++..++.+++|+ +|||+.+....++.+++.++.....+.. ++ +.|+
T Consensus 36 ~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 115 (406)
T PRK11551 36 VAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGV 115 (406)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHh
Confidence 3456778889999999999999999999999999999 8999999888877777665555443322 21 8899
Q ss_pred hhhchhhhhHHHHHHhhCCCCCCCC----------C-------CccccccccccHHHHH-HHHHHHHHHHHH
Q 038282 143 NFGAQWPLVFAITSEFFGPKNHKEP----------E-------DDLNCIGVECFKLSFI-MTAATLFSAFVS 196 (234)
Q Consensus 143 ~~G~~~~~~p~l~~~~fG~~~~~~~----------g-------~g~~~d~~g~Y~~~f~-~a~~~~va~~l~ 196 (234)
+.|...+...+++.|.+..++.++. | .+.. ....+|+..|+ .+.+.++..++.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 186 (406)
T PRK11551 116 GLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLA-AGDAAWRHIFYVGGVGPLLLVPLL 186 (406)
T ss_pred hHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccccCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998887763 1 1111 22346888888 665555554443
No 58
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.44 E-value=1.5e-06 Score=78.54 Aligned_cols=127 Identities=17% Similarity=0.162 Sum_probs=91.8
Q ss_pred hHHHHHHhhCCC--------hhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhh-ccc---h
Q 038282 73 NLRQIGTSLGYP--------KRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFN-VPG---G 136 (234)
Q Consensus 73 ~~~~~~~~~G~s--------~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~-~~~---~ 136 (234)
..+.+..+.+++ ..+.+.+.++..++..++.+++|+ +|||+++.+..++..++..+.... ... .
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (481)
T TIGR00879 50 ALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEM 129 (481)
T ss_pred hhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHH
Confidence 344455555555 789999999999999999999998 899999988888877776665432 222 2
Q ss_pred h--h--hHhhhhhchhhhhHHHHHHhhCCCCCCCC----------C------Cc---cccccccccHHHHH-HHHHHHHH
Q 038282 137 L--N--IMGFNFGAQWPLVFAITSEFFGPKNHKEP----------E------DD---LNCIGVECFKLSFI-MTAATLFS 192 (234)
Q Consensus 137 l--~--l~G~~~G~~~~~~p~l~~~~fG~~~~~~~----------g------~g---~~~d~~g~Y~~~f~-~a~~~~va 192 (234)
+ . +.|++.|...+....+++|.+..++.+.. | .+ .......+|+..|+ .+...++.
T Consensus 130 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~ 209 (481)
T TIGR00879 130 LIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLL 209 (481)
T ss_pred HHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHH
Confidence 2 1 88999999999999999999998888763 1 11 12224568999998 66655555
Q ss_pred HHHHHHH
Q 038282 193 AFVSLIL 199 (234)
Q Consensus 193 ~~l~l~l 199 (234)
.++.+++
T Consensus 210 ~~~~~~l 216 (481)
T TIGR00879 210 FLGLFFL 216 (481)
T ss_pred HHHHhcC
Confidence 5444443
No 59
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.44 E-value=1.5e-06 Score=75.15 Aligned_cols=145 Identities=27% Similarity=0.380 Sum_probs=106.4
Q ss_pred HHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHH
Q 038282 54 LILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLI 129 (234)
Q Consensus 54 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll 129 (234)
|.+....++............+.+.++.|.++.+.+...++..+...++.+++|+ +|||+.+.....+..++.++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~ 81 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLL 81 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHH
Confidence 3344444444444444456677888889999999999999999999999999999 799998888888888877766
Q ss_pred Hhhccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---CccccccccccHHHHH-HH
Q 038282 130 AFNVPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECFKLSFI-MT 186 (234)
Q Consensus 130 ~~~~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y~~~f~-~a 186 (234)
....+.. .+ +.|++.+...+..++++.|+++.|+.++. + .+...+ ..+++..|+ .+
T Consensus 82 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~ 160 (352)
T cd06174 82 AFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAE-SLGWRWLFLILA 160 (352)
T ss_pred HHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHH
Confidence 6543322 22 88999999999999999999999887763 1 223322 234788888 77
Q ss_pred HHHHHHHHHHHHH
Q 038282 187 AATLFSAFVSLIL 199 (234)
Q Consensus 187 ~~~~va~~l~l~l 199 (234)
...+++.++...+
T Consensus 161 ~~~~~~~~~~~~~ 173 (352)
T cd06174 161 ILGLLLALLLLFL 173 (352)
T ss_pred HHHHHHHHHHHHH
Confidence 7777666555443
No 60
>PRK03545 putative arabinose transporter; Provisional
Probab=98.44 E-value=2.5e-06 Score=76.58 Aligned_cols=154 Identities=12% Similarity=0.051 Sum_probs=101.7
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
+.++.+|+|.+|..+...++..........+++++.++ .|.|+.+++.+.++.++++.+|+++.|+ ++|+... .
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~ 275 (390)
T PRK03545 197 SLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-I 275 (390)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-H
Confidence 45789999999876665555444444445667777776 5999999999999999999999999999 5665543 3
Q ss_pred HHHHHHHHHHHH-Hhhccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCccccc
Q 038282 118 ILLVSWIGHLLI-AFNVPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDDLNCI 174 (234)
Q Consensus 118 ~~~~~~i~~~ll-~~~~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d 174 (234)
...+..++..++ ....+.. ++ +.|++.+...+.....+.+..+ ++.++. ..|.+.|
T Consensus 276 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~ 354 (390)
T PRK03545 276 AIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSL 354 (390)
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333333333332 2222222 21 7788877777777777777765 344431 1455554
Q ss_pred cccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 175 GVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 175 ~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
. -+|+..|+ .+.+.+++.++....
T Consensus 355 ~-~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 355 H-LGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred c-cChhHHHHHHHHHHHHHHHHHHHH
Confidence 4 57889998 777777777665443
No 61
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.43 E-value=3.5e-06 Score=76.45 Aligned_cols=160 Identities=19% Similarity=0.202 Sum_probs=114.3
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhh-CCChhhHHHHHHHHHHhcccccccccc---cchHHHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSL-GYPKRGISTFVSLVNIWNCLGRVVSGF---FRRPLMLTII 118 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~-G~s~~~aa~~~si~~i~~~vGRl~~G~---~gr~~~l~~~ 118 (234)
+..+.+|+|+-|..++..++.....+..+.++.|+.++. |+|....+.++-+++++..+|.++.|+ .+.++.+...
T Consensus 203 ~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr~~~~~l~~~ 282 (394)
T COG2814 203 TLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADRGPRRALIAA 282 (394)
T ss_pred HHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccccchhHHHHH
Confidence 467899999999999999998888888888999999885 999999999999999999999999999 3444455555
Q ss_pred HHHHHHHHHHHHhh-ccchh-h----hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCcccccc
Q 038282 119 LLVSWIGHLLIAFN-VPGGL-N----IMGFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDDLNCIG 175 (234)
Q Consensus 119 ~~~~~i~~~ll~~~-~~~~l-~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~ 175 (234)
..+.++.++.+... ....+ . +.|+..+........-.++ ..+++-+.. .+|...|.
T Consensus 283 ~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~ 361 (394)
T COG2814 283 LLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA 361 (394)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55565555555442 22222 1 4455555554444444445 333443321 27777777
Q ss_pred ccccHHHHH-HHHHHHHHHHHHHHHHhhhh
Q 038282 176 VECFKLSFI-MTAATLFSAFVSLILVLMTR 204 (234)
Q Consensus 176 ~g~Y~~~f~-~a~~~~va~~l~l~l~~~~~ 204 (234)
.+|....+ .+.+.+++.++.++..+.++
T Consensus 362 -~g~~~~~~~~a~l~~~a~~~~~~~~~~~~ 390 (394)
T COG2814 362 -LGYAATGWVGAALLLLALLLALLSARKDR 390 (394)
T ss_pred -hchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 88999999 88888888888776654433
No 62
>PRK10133 L-fucose transporter; Provisional
Probab=98.43 E-value=4e-06 Score=77.16 Aligned_cols=119 Identities=18% Similarity=0.214 Sum_probs=89.6
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHH-Hh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQIG-TS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~-~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
.++.+|+|.+|...+..++............+++. ++ .|.|+.+++...+...++..+||++.|+ +++++++..
T Consensus 251 ~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~ 330 (438)
T PRK10133 251 LSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAA 330 (438)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 46789999999877666665555444455566664 44 6999999999999999999999999999 688888777
Q ss_pred HHHHHHHHHHHHHhhcc-chh--h-hHhhhhhchhhhhHHHHHHhhCCC
Q 038282 118 ILLVSWIGHLLIAFNVP-GGL--N-IMGFNFGAQWPLVFAITSEFFGPK 162 (234)
Q Consensus 118 ~~~~~~i~~~ll~~~~~-~~l--~-l~G~~~G~~~~~~p~l~~~~fG~~ 162 (234)
...+.++++++...... ..+ + +.|++.|..++..-+...+.++.+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~ 379 (438)
T PRK10133 331 YALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQD 379 (438)
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHcccchh
Confidence 66666555544443222 122 2 899999999999999999998864
No 63
>PRK11043 putative transporter; Provisional
Probab=98.42 E-value=2.9e-06 Score=76.37 Aligned_cols=128 Identities=16% Similarity=0.128 Sum_probs=95.0
Q ss_pred HhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh----hHh
Q 038282 71 IDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN----IMG 141 (234)
Q Consensus 71 ~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l~G 141 (234)
....+++.++.|.|+.+.+...++..++..++.+++|+ +|||+.+.....+.+++.++.....+.. ++ +.|
T Consensus 26 ~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G 105 (401)
T PRK11043 26 LPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQA 105 (401)
T ss_pred HhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 34566677889999999999999999999999999999 8999999888877777766655543322 22 778
Q ss_pred hhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCccccccccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 142 FNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDDLNCIGVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 142 ~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
++.+...+...+++.|.+..++.++. ..+.+.+ ..+|+..|+ .+.+.++..++.+.+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~ 180 (401)
T PRK11043 106 VGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN-HFGWQAIFATLFAITLLLILPTLRL 180 (401)
T ss_pred hhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCChHHHHHHHHHHHHHHHHHHHHc
Confidence 88888888888899999988765432 1333333 346889998 777777766655444
No 64
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.42 E-value=3.3e-06 Score=77.70 Aligned_cols=152 Identities=13% Similarity=0.197 Sum_probs=100.2
Q ss_pred HHhccHHHHHHHHHHHHhhhhHHhH----HhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 46 QALFSMDMLILFLATICGVGGTLLA----IDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 46 ~~lk~~~F~~l~~~~~~~~~~~~~~----~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
..+|+.+ |.++...++........ ....+.+.++ |+|..+.+...+...++..++.+++|+ +|||+++..
T Consensus 21 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~ 98 (452)
T PRK11273 21 PTYRRLR-WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPA 98 (452)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHH
Confidence 3444433 55555444433322221 1234455555 999999999999999999999999999 899999988
Q ss_pred HHHHHHHHHHHHHhhc----cch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC----------CCc---c----
Q 038282 118 ILLVSWIGHLLIAFNV----PGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP----------EDD---L---- 171 (234)
Q Consensus 118 ~~~~~~i~~~ll~~~~----~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~----------g~g---~---- 171 (234)
..++.+++.+++.... +.. ++ +.|++.|..++.....+.+.|..++.++. |.+ .
T Consensus 99 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~ 178 (452)
T PRK11273 99 GLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLL 178 (452)
T ss_pred HHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 8888777766554421 111 11 77888888888777888899988877652 111 1
Q ss_pred ccccccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 172 NCIGVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 172 ~~d~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
......+|+..|+ .+.+.++..++.++.
T Consensus 179 ~~~~~~gw~~~f~i~~~~~~~~~~l~~~~ 207 (452)
T PRK11273 179 GMAWFNDWHAALYMPAFAAILVALFAFAM 207 (452)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112357889998 777666655554443
No 65
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.42 E-value=1.3e-06 Score=80.11 Aligned_cols=142 Identities=16% Similarity=0.231 Sum_probs=105.3
Q ss_pred HHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhh
Q 038282 57 FLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFN 132 (234)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~ 132 (234)
.+..++...........++.+.++.|.+..+.+++.+...++..++.+++|+ +|||+.+....++..++.++....
T Consensus 8 ~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 87 (485)
T TIGR00711 8 MLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVA 87 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCc
Confidence 3333333333333455678888999999999999999999999999999999 799999998888888877666554
Q ss_pred ccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---CccccccccccHHHHH-HHHHH
Q 038282 133 VPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECFKLSFI-MTAAT 189 (234)
Q Consensus 133 ~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y~~~f~-~a~~~ 189 (234)
.+.. ++ +.|++.|...+...+++.|.+..++.++. + ++++.+ ..+|+..|+ .+.+.
T Consensus 88 ~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~~w~~~f~~~~~~~ 166 (485)
T TIGR00711 88 PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIE-NYHWRWIFLINVPIG 166 (485)
T ss_pred CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhcc-CcCceehhhhhhHHH
Confidence 3322 21 88999999999999999999998877652 1 333332 356888998 77777
Q ss_pred HHHHHHHHHH
Q 038282 190 LFSAFVSLIL 199 (234)
Q Consensus 190 ~va~~l~l~l 199 (234)
+++.++.+..
T Consensus 167 ~~~~~~~~~~ 176 (485)
T TIGR00711 167 IIVVVVAFFI 176 (485)
T ss_pred HHHHHHHHHH
Confidence 6666655444
No 66
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.39 E-value=5.7e-06 Score=75.23 Aligned_cols=155 Identities=18% Similarity=0.199 Sum_probs=113.1
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHh----HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHH
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLL----AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLML 115 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~----~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l 115 (234)
.++..|..+.- +++..+++-.+.+. +....+++.++.|+|..|.+.+.|.+.+.-.++++++|. .+.|..+
T Consensus 19 ~~~~y~~~r~q-if~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm 97 (448)
T COG2271 19 IDKTYKRWRIQ-IFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFM 97 (448)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceee
Confidence 34555555443 45555554433333 234567778888999999999999999999999999999 5667788
Q ss_pred HHHHHHHHHHHHHHHhhccchh----h-hHhhhhhchhhhhHHHHHHhhCCCCCCCC----------CCcc--------c
Q 038282 116 TIILLVSWIGHLLIAFNVPGGL----N-IMGFNFGAQWPLVFAITSEFFGPKNHKEP----------EDDL--------N 172 (234)
Q Consensus 116 ~~~~~~~~i~~~ll~~~~~~~l----~-l~G~~~G~~~~~~p~l~~~~fG~~~~~~~----------g~g~--------~ 172 (234)
...+++.++..+++-+..+..+ + +.|..-|--++-.--++.+.|.++..|+. |++. .
T Consensus 98 ~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~ 177 (448)
T COG2271 98 AFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAF 177 (448)
T ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHH
Confidence 8899998888877766443222 2 88999999999999999999999999973 2221 1
Q ss_pred cccccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 173 CIGVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 173 ~d~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
+...++++.+|+ -++++++.+++.+.+
T Consensus 178 ~~~~~~w~~~f~~pgiiaiival~~~~~ 205 (448)
T COG2271 178 FAFHGGWRAAFYFPGIIAIIVALILLFL 205 (448)
T ss_pred HHhccchhHHHHHHHHHHHHHHHHHHHH
Confidence 223459999999 666666666665554
No 67
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.39 E-value=3.4e-06 Score=75.73 Aligned_cols=126 Identities=10% Similarity=0.155 Sum_probs=92.4
Q ss_pred HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh----hH
Q 038282 70 AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN----IM 140 (234)
Q Consensus 70 ~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l~ 140 (234)
....++.+.++.|.|+.+.+...++..+...++.+++|+ +|||+++....++..++.++.....+.. ++ +.
T Consensus 27 ~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 106 (394)
T PRK11652 27 YVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQ 106 (394)
T ss_pred HhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 445678889999999999999999999999999999999 8999998888877777766655533322 22 77
Q ss_pred hhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---CccccccccccHHHHH-HHHHHHHHHHHH
Q 038282 141 GFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECFKLSFI-MTAATLFSAFVS 196 (234)
Q Consensus 141 G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y~~~f~-~a~~~~va~~l~ 196 (234)
|++.|...+....++.|.+..++.++. + .+...+ ..+|+.+|+ .+.+.++..++.
T Consensus 107 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-~~g~~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK11652 107 GLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT-LFGWRACYLFLLLLGAGVTFSM 179 (394)
T ss_pred HhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccChHHHHHHHHHHHHHHHHHH
Confidence 888888777777888888876665542 1 233322 346899998 666665554443
No 68
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.39 E-value=2.1e-06 Score=79.30 Aligned_cols=122 Identities=12% Similarity=0.095 Sum_probs=80.9
Q ss_pred HhhHHHHHH-hhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhcc-c-hh-h----
Q 038282 71 IDNLRQIGT-SLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVP-G-GL-N---- 138 (234)
Q Consensus 71 ~~~~~~~~~-~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~-~-~l-~---- 138 (234)
...++.+.+ +.|++..+++.+.+..+++..+|+++.|+ ++|++.+.....+..++.+++..... . .. .
T Consensus 295 ~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (496)
T PRK03893 295 QALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLF 374 (496)
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHH
Confidence 356788885 68999999999999999999999999999 68888777666555554433322111 1 11 1
Q ss_pred hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---CccccccccccHHHHH-HHHHHHHHH
Q 038282 139 IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECFKLSFI-MTAATLFSA 193 (234)
Q Consensus 139 l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y~~~f~-~a~~~~va~ 193 (234)
+.++...+..+..++++.+.++.++.++. | .|.+.|.. +|...+. .++.+.+.+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~-g~~~~~~~~~~~~~~~~ 446 (496)
T PRK03893 375 FQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRL-DLGTALASLSFSLTFVV 446 (496)
T ss_pred HHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccC-ChHHHHHHHHHHHHHHH
Confidence 23333344567788899999998887763 1 44444544 4777776 444443333
No 69
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.39 E-value=2.2e-06 Score=76.98 Aligned_cols=152 Identities=10% Similarity=-0.008 Sum_probs=102.9
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHH-hcccccccccc----cchHHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNI-WNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i-~~~vGRl~~G~----~gr~~~l~~ 117 (234)
+.++.+|+|.+|.+.+..++............+++.+|.|+++.+.+.+.++.++ ...+|.++.|+ +|+++.+..
T Consensus 200 ~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~ 279 (390)
T TIGR02718 200 SLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFIL 279 (390)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 4678999999988777766665555455567788899999999999998888874 66688999998 677777766
Q ss_pred HHHHHHHHHHHHH-hhc----cc-h-hh----hHhhhhhchhhhhHHHHHHhhCC-CCCCCC-----------------C
Q 038282 118 ILLVSWIGHLLIA-FNV----PG-G-LN----IMGFNFGAQWPLVFAITSEFFGP-KNHKEP-----------------E 168 (234)
Q Consensus 118 ~~~~~~i~~~ll~-~~~----~~-~-l~----l~G~~~G~~~~~~p~l~~~~fG~-~~~~~~-----------------g 168 (234)
..++.++..+... ... +. . ++ +.+++.|..++...+...+..++ ++.++. .
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~ 359 (390)
T TIGR02718 280 GVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSI 359 (390)
T ss_pred HHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 5555433222221 111 11 1 12 44667788888777787788776 555542 1
Q ss_pred CccccccccccHHHHH-HHHHHHHHHHH
Q 038282 169 DDLNCIGVECFKLSFI-MTAATLFSAFV 195 (234)
Q Consensus 169 ~g~~~d~~g~Y~~~f~-~a~~~~va~~l 195 (234)
+|.++|.. +|+..|. ++++.+++.++
T Consensus 360 ~G~l~~~~-G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 360 AGYLTDRF-GYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHH-ccHHHHHHHHHHHHHHHHH
Confidence 56666654 5888888 77766666544
No 70
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.38 E-value=2.2e-06 Score=75.12 Aligned_cols=129 Identities=15% Similarity=0.163 Sum_probs=94.8
Q ss_pred HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh----hH
Q 038282 70 AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN----IM 140 (234)
Q Consensus 70 ~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l~ 140 (234)
+....+++.++.|.|+.+.+...++..++..++.+.+|+ +|||+.+....++.+++.++.....+.. ++ +.
T Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (377)
T TIGR00890 22 WTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLA 101 (377)
T ss_pred hhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677888899999999999999999999999999999 8999999988888888776665543332 22 78
Q ss_pred hhhhhchhhhhHHHHHHhhCCCCCCCC--------CCc-----cc---cccccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 141 GFNFGAQWPLVFAITSEFFGPKNHKEP--------EDD-----LN---CIGVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 141 G~~~G~~~~~~p~l~~~~fG~~~~~~~--------g~g-----~~---~d~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
|++.|..++.....+.+.+. |+.+.. +.| .. .....+|+..|+ .+.+.++.+++.+..
T Consensus 102 g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 176 (377)
T TIGR00890 102 SAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFL 176 (377)
T ss_pred hHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHh
Confidence 88888888777778888886 444432 111 00 112347899999 777777766665443
No 71
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.38 E-value=6.7e-06 Score=74.01 Aligned_cols=147 Identities=11% Similarity=-0.025 Sum_probs=95.9
Q ss_pred cHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHH
Q 038282 50 SMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWI 124 (234)
Q Consensus 50 ~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i 124 (234)
||.||.+....++...........++.+.++ .|.|+.+.+.+.++..+...++++++|+ +|||+.+...+....+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLV 80 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 6789988776666555544455677777765 6999999999999999999999999999 8999988765555443
Q ss_pred HHHHH---Hhhc----cch--hh----hHhhhhhchhhhhHHHHHHhhCCC--CCCCC-------------CCccccccc
Q 038282 125 GHLLI---AFNV----PGG--LN----IMGFNFGAQWPLVFAITSEFFGPK--NHKEP-------------EDDLNCIGV 176 (234)
Q Consensus 125 ~~~ll---~~~~----~~~--l~----l~G~~~G~~~~~~p~l~~~~fG~~--~~~~~-------------g~g~~~d~~ 176 (234)
+.... .... ... .. +.|++.+...+....++.+.-..+ .++.. .++.+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-- 158 (396)
T TIGR00882 81 LFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRNSNFEYGKARMFGCVGWALCASIAGILFS-- 158 (396)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhhcccccchhhhhcccHHHHHHHHHhhhhc--
Confidence 32211 1110 011 11 566777777777777766642222 12221 1444433
Q ss_pred cccHHHHH-HHHHHHHHHHHHHH
Q 038282 177 ECFKLSFI-MTAATLFSAFVSLI 198 (234)
Q Consensus 177 g~Y~~~f~-~a~~~~va~~l~l~ 198 (234)
-+++..|+ .+.+.++.+++.+.
T Consensus 159 ~~~~~~f~~~~~~~~~~~~~~~~ 181 (396)
T TIGR00882 159 IDPQIVFWLGSGFALILMLLLMF 181 (396)
T ss_pred cCchHHHHHHHHHHHHHHHHHHH
Confidence 37888998 77777777655543
No 72
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.37 E-value=5.6e-06 Score=74.16 Aligned_cols=155 Identities=15% Similarity=0.052 Sum_probs=99.1
Q ss_pred HHHHhccHHHHHHHHHHHH-hhhhHHhHHhhHHHHHHhhCCChh----hHHHHHHHHHHhcccccccccc----cchHHH
Q 038282 44 ILQALFSMDMLILFLATIC-GVGGTLLAIDNLRQIGTSLGYPKR----GISTFVSLVNIWNCLGRVVSGF----FRRPLM 114 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~-~~~~~~~~~~~~~~~~~~~G~s~~----~aa~~~si~~i~~~vGRl~~G~----~gr~~~ 114 (234)
..+.+|+++++..+....+ ............+.+..+.+.+.. ..+.+.++.+++..++++.+|+ ++|++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~ 290 (408)
T PRK09874 211 VVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKI 290 (408)
T ss_pred HHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchh
Confidence 4567788888764333222 222221233456666666533322 2345666777888899999998 688888
Q ss_pred HHHHHHHHHHHHHHHHhhccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---Cccc
Q 038282 115 LTIILLVSWIGHLLIAFNVPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLN 172 (234)
Q Consensus 115 l~~~~~~~~i~~~ll~~~~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~ 172 (234)
+.....+.+++.+.+....+.. ++ +.|++.|...+...+++.+..+.++.++. | .|.+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l 370 (408)
T PRK09874 291 LITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAI 370 (408)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHH
Confidence 8777766666555444333222 21 78999999988888888888887777763 1 4444
Q ss_pred cccccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 173 CIGVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 173 ~d~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
.|. .+|+..|+ .+++.++++++....
T Consensus 371 ~~~-~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 371 SAN-YGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred Hhh-cchhHHHHHHHHHHHHHHHHHHHH
Confidence 443 46999999 888888887766543
No 73
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.36 E-value=1.8e-06 Score=74.62 Aligned_cols=146 Identities=24% Similarity=0.320 Sum_probs=108.9
Q ss_pred HHHHHHHHHHHHhhhhHHhHHhhHHHHHHhh-CCChhhHHHHHHHHHHhcccccccccc----cchHH-HHHHHHHHHHH
Q 038282 51 MDMLILFLATICGVGGTLLAIDNLRQIGTSL-GYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPL-MLTIILLVSWI 124 (234)
Q Consensus 51 ~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~-G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~-~l~~~~~~~~i 124 (234)
|++|.+.+..++..........+.+.+.++. |.++.+.+...++.+++..++++++|+ ++||+ .+.....+..+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i 254 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAAL 254 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 4555555555554444444556777888776 999999999999999999999999998 68888 88888877777
Q ss_pred HHHHHHhhccch-h---h-hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCccccccccccHHH
Q 038282 125 GHLLIAFNVPGG-L---N-IMGFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDDLNCIGVECFKLS 182 (234)
Q Consensus 125 ~~~ll~~~~~~~-l---~-l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~~g~Y~~~ 182 (234)
+...+....+.. . . +.|++.+...+....++.|.++.++.++. ..+...| ..+|+..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~-~~~~~~~ 333 (352)
T cd06174 255 GLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD-TGGYGGV 333 (352)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccCcchH
Confidence 776665533222 1 2 88999999999999999999998888763 1333333 4578899
Q ss_pred HH-HHHHHHHHHHHHH
Q 038282 183 FI-MTAATLFSAFVSL 197 (234)
Q Consensus 183 f~-~a~~~~va~~l~l 197 (234)
|+ .+++.+++.++..
T Consensus 334 ~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 334 FLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHhe
Confidence 99 8888888776654
No 74
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.36 E-value=1.3e-06 Score=77.55 Aligned_cols=128 Identities=15% Similarity=0.157 Sum_probs=99.2
Q ss_pred HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh----hH
Q 038282 70 AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN----IM 140 (234)
Q Consensus 70 ~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l~ 140 (234)
....++.+.++.|+|+.+.+.+.++..++..++++++|+ +|||+++....++.+++.++.....+.. ++ +.
T Consensus 10 ~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~ 89 (377)
T PRK11102 10 YLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLH 89 (377)
T ss_pred HhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 446788889999999999999999999999999999998 7999999888888887777666543322 21 88
Q ss_pred hhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---CccccccccccHHHHH-HHHHHHHHHHHHHH
Q 038282 141 GFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECFKLSFI-MTAATLFSAFVSLI 198 (234)
Q Consensus 141 G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~ 198 (234)
|++.+...+...+++.|.+..++.++. + .+...+ ..+|+..|+ .+.++++..++...
T Consensus 90 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~ 164 (377)
T PRK11102 90 GLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV-WFSWHAIFWVLALAAILAAALVFF 164 (377)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998887753 1 233333 236888988 77777666655543
No 75
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.35 E-value=3.1e-06 Score=75.88 Aligned_cols=129 Identities=16% Similarity=0.143 Sum_probs=98.6
Q ss_pred HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh----hH
Q 038282 70 AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN----IM 140 (234)
Q Consensus 70 ~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l~ 140 (234)
....++.+.++.|.|+.+.+...++..++..++.++.|+ +|||+.+....++.+++..+.....+.. ++ +.
T Consensus 22 ~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~ 101 (392)
T PRK10473 22 YLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQ 101 (392)
T ss_pred HhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 345688888999999999999999999999999999999 8999999888888777776665543322 22 78
Q ss_pred hhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---CccccccccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 141 GFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 141 G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
|++.|...+....++.|.+..++.++. + ++... ...+|+..|+ .+++.++..++.+..
T Consensus 102 g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~-~~~g~~~~~~~~~~~~~i~~~~~~~~ 177 (392)
T PRK10473 102 GIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIM-LKFPWQSLFYTMAAMGILVLLLSLFI 177 (392)
T ss_pred HhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcChHHHHHHHHHHHHHHHHHHHHH
Confidence 899898888899999999998887653 1 22222 2357889998 777777776665443
No 76
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.34 E-value=3.3e-06 Score=76.39 Aligned_cols=125 Identities=14% Similarity=0.092 Sum_probs=85.5
Q ss_pred CHHHHhccHHHHHHHHHHHHhh---hhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHH
Q 038282 43 TILQALFSMDMLILFLATICGV---GGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLML 115 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~---~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l 115 (234)
+.++.+|++.++.....+.+.. .....+..+++.+.++.|.++.+.+.+.++.+++..+|++++|+ ++|++.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~ 299 (426)
T PRK12307 220 SMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTF 299 (426)
T ss_pred HHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 4678899999886544332211 12222456788888889999999999999999999999999998 6888877
Q ss_pred HHHHHHHHHHHHHHHhh-ccchh-h---hHhhh--hhchhhhhHHHHHHhhCCCCCCCC
Q 038282 116 TIILLVSWIGHLLIAFN-VPGGL-N---IMGFN--FGAQWPLVFAITSEFFGPKNHKEP 167 (234)
Q Consensus 116 ~~~~~~~~i~~~ll~~~-~~~~l-~---l~G~~--~G~~~~~~p~l~~~~fG~~~~~~~ 167 (234)
....++.++.++.+... ..... . ++|++ ..+..+..|.++.|.++.++.++.
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~ 358 (426)
T PRK12307 300 SIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLG 358 (426)
T ss_pred HHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhh
Confidence 77766665554444322 12111 1 33433 234456788899999999888863
No 77
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.34 E-value=1.4e-06 Score=78.67 Aligned_cols=159 Identities=10% Similarity=0.024 Sum_probs=100.7
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHH-HHHhhCCChhhHHHHHHHHHH-hcccccccccc----cchHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQ-IGTSLGYPKRGISTFVSLVNI-WNCLGRVVSGF----FRRPLMLT 116 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~-~~~~~G~s~~~aa~~~si~~i-~~~vGRl~~G~----~gr~~~l~ 116 (234)
+.++.+|+|.+|.+++..++............++ +.++.|+++.+.+.+.+..++ +..+|.+++|+ +++++.+.
T Consensus 201 ~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~ 280 (402)
T PRK11902 201 PLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLM 280 (402)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 4567899999998776655544332222222333 445589999988888776654 57888999998 67777766
Q ss_pred HHHHHHHHHHHHH---Hhhccc-hh-h--------hHhhhhhchhhhhHHHHHHhhCCCCCCCC-------------CCc
Q 038282 117 IILLVSWIGHLLI---AFNVPG-GL-N--------IMGFNFGAQWPLVFAITSEFFGPKNHKEP-------------EDD 170 (234)
Q Consensus 117 ~~~~~~~i~~~ll---~~~~~~-~l-~--------l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-------------g~g 170 (234)
....+.++..+.+ ....+. .. + +.|++.+...+....++.+.++.++++.. .+|
T Consensus 281 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~G 360 (402)
T PRK11902 281 LFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYALLSALASVGRVYVGPTSG 360 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6555554443322 221121 21 1 34566777788888888888887776632 155
Q ss_pred cccccccccHHHHH-HHHHHHHHHHHHHHHHhh
Q 038282 171 LNCIGVECFKLSFI-MTAATLFSAFVSLILVLM 202 (234)
Q Consensus 171 ~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l~~~ 202 (234)
.+.|.. +|...|. .+.+++++.++......+
T Consensus 361 ~l~~~~-G~~~~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 361 YLVEAY-GWPGFYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred HHHHHh-ChHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 566654 5888888 777777776665444443
No 78
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.34 E-value=3.8e-06 Score=75.79 Aligned_cols=146 Identities=11% Similarity=-0.003 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHhhhh----HHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHH
Q 038282 51 MDMLILFLATICGVGG----TLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVS 122 (234)
Q Consensus 51 ~~F~~l~~~~~~~~~~----~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~ 122 (234)
+++|++.+...+.... ...+...++.+.++.|.|+.+.+...+...++..++.++.|. +|||+++....++.
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 88 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFF 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 5666655555444332 222344677788899999999999999999999999999998 89999988888777
Q ss_pred HHHHHHHHhhccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---CccccccccccH
Q 038282 123 WIGHLLIAFNVPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECFK 180 (234)
Q Consensus 123 ~i~~~ll~~~~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y~ 180 (234)
+++.++.....+.. ++ +.|++.+...+...+.+.|.+..++..+. + .+...+ ..+|+
T Consensus 89 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-~~~w~ 167 (406)
T PRK15402 89 ILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIH-VLPWR 167 (406)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCcc
Confidence 77766655543322 22 77888888888888999999987765542 1 222222 35788
Q ss_pred HHHH-HHHHHHHHHHHHH
Q 038282 181 LSFI-MTAATLFSAFVSL 197 (234)
Q Consensus 181 ~~f~-~a~~~~va~~l~l 197 (234)
.+|+ .+++.+++.+...
T Consensus 168 ~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK15402 168 GMFVLFAALAALSFFGLW 185 (406)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 9998 7777777665443
No 79
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.33 E-value=3.4e-06 Score=77.90 Aligned_cols=115 Identities=15% Similarity=0.186 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHH
Q 038282 52 DMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHL 127 (234)
Q Consensus 52 ~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ 127 (234)
.+..+++..++.......+...++.+.++.|.|+.+.+.+.+...++..++.++.|+ +|||+++....++.+++.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 100 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTL 100 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 445555555554444444455677788889999999999999999999999999999 8999998888888877777
Q ss_pred HHHhhccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 128 LIAFNVPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 128 ll~~~~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
++....+.. ++ +.|++.|...+....++.|.+..++.++
T Consensus 101 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~ 144 (496)
T PRK03893 101 ACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNK 144 (496)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 666543322 22 8899999999999999999999887765
No 80
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.33 E-value=5e-06 Score=75.10 Aligned_cols=122 Identities=11% Similarity=0.062 Sum_probs=93.9
Q ss_pred HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh----hH
Q 038282 70 AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN----IM 140 (234)
Q Consensus 70 ~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l~ 140 (234)
+...++.+.++.|+|..+.+.+.+...++..++.+..|+ +|||+++..+..+.+++.++.....+.. ++ +.
T Consensus 28 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~ 107 (393)
T PRK09705 28 VGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLG 107 (393)
T ss_pred cchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHH
Confidence 335677888899999999999999999999999999999 8999999999999999888777654432 22 88
Q ss_pred hhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---CccccccccccHHHHH-HHHHHHHH
Q 038282 141 GFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECFKLSFI-MTAATLFS 192 (234)
Q Consensus 141 G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y~~~f~-~a~~~~va 192 (234)
|++.|...+..+.++.+.|. ++.+.. + .+.+.+..++|+..+. .+...+++
T Consensus 108 Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~ 176 (393)
T PRK09705 108 GVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVA 176 (393)
T ss_pred HhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 99999999999999999996 555542 1 2223333356788776 55554443
No 81
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.32 E-value=9e-06 Score=73.71 Aligned_cols=153 Identities=8% Similarity=-0.068 Sum_probs=95.3
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc-c----chHHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF-F----RRPLMLTI 117 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~-~----gr~~~l~~ 117 (234)
+.++.+|+|+++.+.+..+.............|.+.++.+.++.+.+.+.++.++...++....++ . +.++.+..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 279 (400)
T PRK11646 200 GMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMA 279 (400)
T ss_pred HHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHH
Confidence 467889999998765554433322222345677778887777778888888877766544443444 2 22344555
Q ss_pred HHHHHHHHHHHHHhhccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCcccccc
Q 038282 118 ILLVSWIGHLLIAFNVPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDDLNCIG 175 (234)
Q Consensus 118 ~~~~~~i~~~ll~~~~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~ 175 (234)
.+++.+++.+++....+.. +. +++++.+...+..++++.+..+.++.++. ..|.+.|.
T Consensus 280 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 280 GLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 5556666655554432222 21 67888888888888999999999888874 26666776
Q ss_pred ccc---cHHHHH-HHHHHHHHHHH
Q 038282 176 VEC---FKLSFI-MTAATLFSAFV 195 (234)
Q Consensus 176 ~g~---Y~~~f~-~a~~~~va~~l 195 (234)
+++ +..+|+ .+.+.+++.+.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 360 GKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HhhcCCcchHHHHHHHHHHHHHHH
Confidence 543 456666 55555555433
No 82
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.31 E-value=9.1e-06 Score=71.54 Aligned_cols=119 Identities=15% Similarity=0.167 Sum_probs=93.6
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh---hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHH
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS---LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLT 116 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~---~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~ 116 (234)
.++.+|+|.+|+..+.+|+..+....+..+.+.+..+ .|+++.+++...+....+..+||++.++ +++++.+.
T Consensus 133 ~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~ 212 (310)
T TIGR01272 133 KTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLA 212 (310)
T ss_pred hhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 3468899999998888888887777777888888875 3999999999999999999999999999 77777777
Q ss_pred HHHHHHHHHHHHHHhhccc-hhh---hHhhhhhchhhhhHHHHHHhhCCC
Q 038282 117 IILLVSWIGHLLIAFNVPG-GLN---IMGFNFGAQWPLVFAITSEFFGPK 162 (234)
Q Consensus 117 ~~~~~~~i~~~ll~~~~~~-~l~---l~G~~~G~~~~~~p~l~~~~fG~~ 162 (234)
+...+.+++.++....... ..+ ++|++.+..++..-+...+.++.+
T Consensus 213 ~~~~l~~~~~~l~~~~~~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~ 262 (310)
T TIGR01272 213 FNAFLAVLLSIGAALTHGYVAMWFVLALGLFNSIMFPTIFSLALNALGRH 262 (310)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 7666666655444432222 122 889999999999888888888764
No 83
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.29 E-value=8e-06 Score=73.17 Aligned_cols=148 Identities=14% Similarity=0.084 Sum_probs=100.2
Q ss_pred cHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhh-----HHHHHHHHHHhcccccccccc----cchHHHHHHHHH
Q 038282 50 SMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRG-----ISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILL 120 (234)
Q Consensus 50 ~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~-----aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~ 120 (234)
++.+..+++..++...........++.+.++.|.+..+ .+.+.++..+...++.+++|+ +|||+.+....+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 92 (408)
T PRK09874 13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHH
Confidence 44566667766665555444556788899999988654 367888888999999999998 799998888777
Q ss_pred HHHHHHHHHHhhccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---Cccccccccc
Q 038282 121 VSWIGHLLIAFNVPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVEC 178 (234)
Q Consensus 121 ~~~i~~~ll~~~~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~ 178 (234)
+.+++.+++....+.. ++ +.|++.+ ..+....++.+.+..++.++. + .+.+.+ ..+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~ 170 (408)
T PRK09874 93 GMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD-SYG 170 (408)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HhC
Confidence 7777766555433322 22 6676644 456666778888887776652 1 223222 346
Q ss_pred cHHHHH-HHHHHHHHHHHHHHH
Q 038282 179 FKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 179 Y~~~f~-~a~~~~va~~l~l~l 199 (234)
|+.+|+ .+.+.+++.++.+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~ 192 (408)
T PRK09874 171 LRPVFFITASVLFLCFLVTLFC 192 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 888888 777777666655443
No 84
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.29 E-value=8.2e-06 Score=75.82 Aligned_cols=158 Identities=12% Similarity=0.117 Sum_probs=102.9
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHH
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIIL 119 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~ 119 (234)
..+++|+|+.|++.+.+++.-+.........|.+.++ .++.........+..+...++|++.|+ +|+++++...+
T Consensus 245 ~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~ 323 (462)
T PRK15034 245 QLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINF 323 (462)
T ss_pred HHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHH
Confidence 5679999999998888877555544455577777766 344333333344456778999999999 78888888777
Q ss_pred HHHHHHHHHHH--hhcc--c--hhh---------hHhhhhhchhhhhHHHHHH--hhCCC---------------CCCCC
Q 038282 120 LVSWIGHLLIA--FNVP--G--GLN---------IMGFNFGAQWPLVFAITSE--FFGPK---------------NHKEP 167 (234)
Q Consensus 120 ~~~~i~~~ll~--~~~~--~--~l~---------l~G~~~G~~~~~~p~l~~~--~fG~~---------------~~~~~ 167 (234)
+...++.+.+. .+.. . ..+ ..|++.|+++-++|.+-.+ ....+ +.+..
T Consensus 324 i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v 403 (462)
T PRK15034 324 IFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAA 403 (462)
T ss_pred HHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHH
Confidence 76665543322 2211 1 111 5588888888888776542 11112 11110
Q ss_pred ----------C-------CccccccccccHHHHH-HHHHHHHHHHHHHHHHhh
Q 038282 168 ----------E-------DDLNCIGVECFKLSFI-MTAATLFSAFVSLILVLM 202 (234)
Q Consensus 168 ----------g-------~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l~~~ 202 (234)
| -|...+.+|+|...|+ ..++.+++..+.++...|
T Consensus 404 ~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r 456 (462)
T PRK15034 404 LGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGR 456 (462)
T ss_pred HHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1 3456778999999999 999988888888776443
No 85
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.28 E-value=7.5e-06 Score=74.06 Aligned_cols=98 Identities=14% Similarity=0.156 Sum_probs=81.6
Q ss_pred HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh----hH
Q 038282 70 AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN----IM 140 (234)
Q Consensus 70 ~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l~ 140 (234)
+....+.+.++.|.|+.+.+...++..++..++.+++|+ +|||+++....++.+++.++.....+.. ++ +.
T Consensus 37 ~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 116 (426)
T PRK12307 37 IFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIV 116 (426)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 345566777889999999999999999999999999999 8999999998888888776665544332 22 88
Q ss_pred hhhhhchhhhhHHHHHHhhCCCCCCCC
Q 038282 141 GFNFGAQWPLVFAITSEFFGPKNHKEP 167 (234)
Q Consensus 141 G~~~G~~~~~~p~l~~~~fG~~~~~~~ 167 (234)
|++.|..++....++.|.+..++.++.
T Consensus 117 G~g~g~~~~~~~~~~~~~~~~~~r~~~ 143 (426)
T PRK12307 117 GMGMAGEYACASTYAVESWPKHLKSKA 143 (426)
T ss_pred HHHHhhHHHHHHHHHHHhCCHhHhhHh
Confidence 999999999999999999998887763
No 86
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.28 E-value=1.1e-05 Score=72.72 Aligned_cols=155 Identities=10% Similarity=0.026 Sum_probs=98.8
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhh----CCChhhHHHHHHHHHHhcccccccccc----cchHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSL----GYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLM 114 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~----G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~ 114 (234)
+..+.+|++.+|.+.+..++............+.+.++. +.+....+...++..+.+.++.+..|+ +|+|+.
T Consensus 207 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~ 286 (396)
T TIGR00882 207 LALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNA 286 (396)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 467899999998766554443322222323445555443 556666788888888999999999998 788888
Q ss_pred HHHHHHHHHHHHHHHHhhccchh-h----hHhhhhhchhhhhHHHHHHhhCCCCCCCC------------------CCcc
Q 038282 115 LTIILLVSWIGHLLIAFNVPGGL-N----IMGFNFGAQWPLVFAITSEFFGPKNHKEP------------------EDDL 171 (234)
Q Consensus 115 l~~~~~~~~i~~~ll~~~~~~~l-~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~------------------g~g~ 171 (234)
+.+..++.+++..+.....+... + +.|++.+......-.+..+.++.+..++. ..|+
T Consensus 287 l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~ 366 (396)
T TIGR00882 287 LLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGN 366 (396)
T ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHH
Confidence 88777777776655444333222 2 55555544444444455666666654331 2566
Q ss_pred ccccccccHHHHH-HHHHHHHHHHHHHH
Q 038282 172 NCIGVECFKLSFI-MTAATLFSAFVSLI 198 (234)
Q Consensus 172 ~~d~~g~Y~~~f~-~a~~~~va~~l~l~ 198 (234)
+.|.. +|+.+|+ .+.+.++.+++...
T Consensus 367 l~~~~-G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 367 MYDSI-GFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHhc-ccHHHHHHHHHHHHHHHHHHHH
Confidence 66654 5999999 88888877776543
No 87
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.26 E-value=9.8e-06 Score=73.48 Aligned_cols=148 Identities=14% Similarity=0.058 Sum_probs=105.9
Q ss_pred HhccHHHHHHHHHHHHhhhhHHhHHhhHHHH-HHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHH
Q 038282 47 ALFSMDMLILFLATICGVGGTLLAIDNLRQI-GTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLV 121 (234)
Q Consensus 47 ~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~-~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~ 121 (234)
.-|-++ |.++...++.......+...++.+ .++.|.|..+.+...+...+...+.++++|+ +|||+.+....++
T Consensus 7 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~ 85 (400)
T PRK11646 7 ARNLGK-YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLM 85 (400)
T ss_pred cccccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHH
Confidence 334455 444555555555555556666665 4678999999999999999999999999998 8999999988888
Q ss_pred HHHHHHHHHhhccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---Ccccccccccc
Q 038282 122 SWIGHLLIAFNVPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECF 179 (234)
Q Consensus 122 ~~i~~~ll~~~~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y 179 (234)
.+++.++.....+.. ++ +.|++.|...+...+++.+.++.++.++. | ++++. ..+|
T Consensus 86 ~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~--~~g~ 163 (400)
T PRK11646 86 RAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL--QYDF 163 (400)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhH
Confidence 888877766543332 22 77888877778888889999988887763 1 44443 3478
Q ss_pred HHHHH-HHHHHHHHHHHHH
Q 038282 180 KLSFI-MTAATLFSAFVSL 197 (234)
Q Consensus 180 ~~~f~-~a~~~~va~~l~l 197 (234)
+..|+ .+...++++++..
T Consensus 164 ~~~f~~~~~~~~~~~i~~~ 182 (400)
T PRK11646 164 RLVCATGAVLFVLAAAFNA 182 (400)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 88898 7766666655443
No 88
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.26 E-value=4.5e-06 Score=76.01 Aligned_cols=143 Identities=11% Similarity=0.059 Sum_probs=92.3
Q ss_pred HhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhh--CCChhhHHHHHHHHHHhcccccccccc----cchHHH-HHHHH
Q 038282 47 ALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSL--GYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLM-LTIIL 119 (234)
Q Consensus 47 ~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~--G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~-l~~~~ 119 (234)
.++++.+|...+.+++.......+..++|++.++. |.++.+++.+.++..++..+|++++|+ ++|++. +...+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~ 317 (412)
T TIGR02332 238 EIFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPY 317 (412)
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHH
Confidence 35578899888877776666666778999999874 678888899999999999999999999 554543 34444
Q ss_pred HHHHHHHHHHHhhccchh-h----hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCcccccccc
Q 038282 120 LVSWIGHLLIAFNVPGGL-N----IMGFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDDLNCIGVE 177 (234)
Q Consensus 120 ~~~~i~~~ll~~~~~~~l-~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~~g 177 (234)
++..+++.+......... + +.+++.....+.......+.+++++.++. ..|.+.|..|
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g 397 (412)
T TIGR02332 318 LFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATG 397 (412)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCC
Confidence 444444333222111111 1 22223322333344444567887777642 2556778889
Q ss_pred ccHHHHH-HHHHH
Q 038282 178 CFKLSFI-MTAAT 189 (234)
Q Consensus 178 ~Y~~~f~-~a~~~ 189 (234)
+|+..|. .+++.
T Consensus 398 ~~~~~~~~~~~~~ 410 (412)
T TIGR02332 398 SFNSGLWFVAALL 410 (412)
T ss_pred CCchhHHHHHHHH
Confidence 9999998 65543
No 89
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.26 E-value=8.2e-06 Score=74.96 Aligned_cols=119 Identities=15% Similarity=0.138 Sum_probs=88.2
Q ss_pred hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhc---------cc----hh--h--h
Q 038282 81 LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNV---------PG----GL--N--I 139 (234)
Q Consensus 81 ~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~---------~~----~l--~--l 139 (234)
.|.++.+.+.+.++..++..+|.+++|+ +|||+.+.+..++.+++.++...+. .. .+ + +
T Consensus 50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l 129 (479)
T PRK10077 50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRII 129 (479)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHH
Confidence 3888999999999999999999999999 8999999988888777655443310 11 11 2 8
Q ss_pred HhhhhhchhhhhHHHHHHhhCCCCCCCC----------C-------Cccc-------cccccccHHHHH-HHHHHHHHHH
Q 038282 140 MGFNFGAQWPLVFAITSEFFGPKNHKEP----------E-------DDLN-------CIGVECFKLSFI-MTAATLFSAF 194 (234)
Q Consensus 140 ~G~~~G~~~~~~p~l~~~~fG~~~~~~~----------g-------~g~~-------~d~~g~Y~~~f~-~a~~~~va~~ 194 (234)
.|++.|+..+..+++++|++..++.+.. | +... .....+|+..|+ .+...++..+
T Consensus 130 ~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~ 209 (479)
T PRK10077 130 GGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLM 209 (479)
T ss_pred HhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999988863 1 0000 012347999998 7766666655
Q ss_pred HHHHH
Q 038282 195 VSLIL 199 (234)
Q Consensus 195 l~l~l 199 (234)
+.+++
T Consensus 210 ~~~~l 214 (479)
T PRK10077 210 LLYFV 214 (479)
T ss_pred HHHcC
Confidence 44443
No 90
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.25 E-value=1.6e-05 Score=72.03 Aligned_cols=122 Identities=16% Similarity=0.200 Sum_probs=97.2
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
...+++|+|.++.-.+..|+..+....+-.+++.+..+ .|.++.+++..+|...++-.+||++.-+ +...+.+..
T Consensus 228 ~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf 307 (422)
T COG0738 228 GLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAF 307 (422)
T ss_pred hHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 78899999999999999999999998888899999998 7999999999999999999999987777 555665555
Q ss_pred HHHHHHHHHHHHHhhccc-hhh---hHhhhhhchhhhhHHHHHHhhCCCCCC
Q 038282 118 ILLVSWIGHLLIAFNVPG-GLN---IMGFNFGAQWPLVFAITSEFFGPKNHK 165 (234)
Q Consensus 118 ~~~~~~i~~~ll~~~~~~-~l~---l~G~~~G~~~~~~p~l~~~~fG~~~~~ 165 (234)
..++..+-++......+. .+| +.|+..+..+|.+-++..+..| ++-.
T Consensus 308 ~a~~~ill~~~~~l~~g~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts 358 (422)
T COG0738 308 YALIAILLLLAVALIGGVVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTS 358 (422)
T ss_pred HHHHHHHHHHHHHHhcChHHHHHHHHHHHHhHHHHHHHHHHHHhccC-cccc
Confidence 554444333333332232 234 8999999999999999999998 4443
No 91
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.24 E-value=5.8e-06 Score=75.35 Aligned_cols=127 Identities=13% Similarity=0.018 Sum_probs=95.1
Q ss_pred HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh----hH
Q 038282 70 AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN----IM 140 (234)
Q Consensus 70 ~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l~ 140 (234)
....++.+.++.|.+..+.+..++++.++..++.+++|+ +|||+++....++.+++.++.....+.. ++ +.
T Consensus 35 ~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~ 114 (413)
T PRK15403 35 IQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQ 114 (413)
T ss_pred hccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 345677788899999999999999999999999999998 8999999888888877776665544332 22 77
Q ss_pred hhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---CccccccccccHHHHH-HHHHHHHHHHHHH
Q 038282 141 GFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECFKLSFI-MTAATLFSAFVSL 197 (234)
Q Consensus 141 G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l 197 (234)
|++.|...+....++.|.|+.++.++. | ++.+. ...+|+..|+ .+++.+++.++.+
T Consensus 115 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~-~~~gw~~~f~~~~~~~~i~~~~~~ 188 (413)
T PRK15403 115 GTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALM-HFVHWKVLFAIIAVMGLIAFVGLL 188 (413)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHH
Confidence 887776666677788899988776542 1 22222 2357999999 8877777765543
No 92
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.24 E-value=1.5e-05 Score=71.80 Aligned_cols=141 Identities=13% Similarity=-0.080 Sum_probs=91.8
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHH-hhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGT-SLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~-~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
+.++.+|+|++|.+.+..++............+.+.+ +.|.++.+.+.......++..+|++++|+ +++++.+.+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~ 286 (406)
T PRK15402 207 DYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRM 286 (406)
T ss_pred HHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 3467899999998777665544333333445566654 47999988888777777888999999998 678887777
Q ss_pred HHHHHHHHHHHHHhhc---c-ch--hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCc
Q 038282 118 ILLVSWIGHLLIAFNV---P-GG--LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDD 170 (234)
Q Consensus 118 ~~~~~~i~~~ll~~~~---~-~~--l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g 170 (234)
..++.+++.+++.... + .. .+ ++|++.|...+.....+.... .++.++. ..+
T Consensus 287 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~g~~~~~ 365 (406)
T PRK15402 287 GLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSS-DVSKGTVSAAMGMLSMLIFTVGIELSK 365 (406)
T ss_pred HHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhc-cccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777666665554321 1 11 11 678888777665544443322 2444442 166
Q ss_pred cccccccccHHHHH
Q 038282 171 LNCIGVECFKLSFI 184 (234)
Q Consensus 171 ~~~d~~g~Y~~~f~ 184 (234)
..++..+.|...+.
T Consensus 366 ~l~~~~~~~~~~~~ 379 (406)
T PRK15402 366 HAYLGGGNGLFNLF 379 (406)
T ss_pred hcccCCchHHHHHH
Confidence 77788887776665
No 93
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.22 E-value=1.3e-05 Score=73.73 Aligned_cols=165 Identities=11% Similarity=0.024 Sum_probs=99.1
Q ss_pred CCHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHH---
Q 038282 42 YTILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPL--- 113 (234)
Q Consensus 42 ~~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~--- 113 (234)
.+.++.++++.+|.+++..++.......+..++|.+.++ .|.+..+.+...++..++..+++++.|+ +++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~ 331 (465)
T TIGR00894 252 LPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLS 331 (465)
T ss_pred CCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 457899999999998888777666665566788888765 6999999999999999999999999999 22111
Q ss_pred ---HHHHHHHH--HHHHHHH--HHh-hccchh----h-hHhhhhhchhhhhHHHHHHhhCCCCCCCC-------------
Q 038282 114 ---MLTIILLV--SWIGHLL--IAF-NVPGGL----N-IMGFNFGAQWPLVFAITSEFFGPKNHKEP------------- 167 (234)
Q Consensus 114 ---~l~~~~~~--~~i~~~l--l~~-~~~~~l----~-l~G~~~G~~~~~~p~l~~~~fG~~~~~~~------------- 167 (234)
...+...+ ...+..+ ... ...... . +.+.+.+...+..-....+..+. +.+..
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~ 410 (465)
T TIGR00894 332 LTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGL 410 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHH
Confidence 11111111 1111111 111 111111 1 33444444433333333444433 44321
Q ss_pred ----CCccccccc--cccHHHHH-HHHHHHHHHHHHHHHHhhhhhhh
Q 038282 168 ----EDDLNCIGV--ECFKLSFI-MTAATLFSAFVSLILVLMTRKFY 207 (234)
Q Consensus 168 ----g~g~~~d~~--g~Y~~~f~-~a~~~~va~~l~l~l~~~~~~~~ 207 (234)
..|.+.|.. ++|...|+ .++..+++.++.......++..|
T Consensus 411 i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~w 457 (465)
T TIGR00894 411 IASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFGSAERQDW 457 (465)
T ss_pred HHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeeecceecCC
Confidence 144444433 67999999 88888888877766555455555
No 94
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.22 E-value=2.1e-05 Score=71.85 Aligned_cols=158 Identities=17% Similarity=0.133 Sum_probs=109.7
Q ss_pred CCHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhC-CChhhHHHHHHHHHHhcccccccccc----cchHHHHH
Q 038282 42 YTILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLG-YPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLT 116 (234)
Q Consensus 42 ~~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G-~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~ 116 (234)
.+..+++|+|++..+++..++....--......+.+.++.| .+....+.++++-.+..++-=+..++ +|.++++.
T Consensus 198 ~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~ 277 (400)
T PF03825_consen 198 LDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLL 277 (400)
T ss_pred hHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 34568999999988776666554443334567778899987 77777788888888888888888887 67788888
Q ss_pred HHHHHHHHHHHHHHhh-ccch-hh--------hHhhhhhchhhhhHHHHHHhhCCCCCCCC------------------C
Q 038282 117 IILLVSWIGHLLIAFN-VPGG-LN--------IMGFNFGAQWPLVFAITSEFFGPKNHKEP------------------E 168 (234)
Q Consensus 117 ~~~~~~~i~~~ll~~~-~~~~-l~--------l~G~~~G~~~~~~p~l~~~~fG~~~~~~~------------------g 168 (234)
++.+..++=..+.... ++.+ .+ +.|+++|..+.....++.+....+..++. .
T Consensus 278 ~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~i 357 (400)
T PF03825_consen 278 LALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLI 357 (400)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHH
Confidence 8777777655555543 3322 11 47999999999999999999988877642 2
Q ss_pred Ccccccccc-----ccHHHHH-HHHHHHHHHHHHHHH
Q 038282 169 DDLNCIGVE-----CFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 169 ~g~~~d~~g-----~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
+|+++|..| .|...+. .+++.++..++...+
T Consensus 358 gG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 358 GGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred HHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 777777543 2334444 555555555444443
No 95
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.21 E-value=1.2e-05 Score=75.06 Aligned_cols=157 Identities=9% Similarity=0.033 Sum_probs=95.7
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHH-hhCCChhhHHHHHH-HHHHhcccccccccc----cchHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGT-SLGYPKRGISTFVS-LVNIWNCLGRVVSGF----FRRPLMLT 116 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~-~~G~s~~~aa~~~s-i~~i~~~vGRl~~G~----~gr~~~l~ 116 (234)
+.++.++++.+|.+.+..++............+++.. +.|+|+.+.+.... +..++..+|.+++|+ +++++.+.
T Consensus 214 ~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~ 293 (491)
T PRK11010 214 PLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALM 293 (491)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 4567888888887666555444343334455667654 57999999988875 445788999999999 67777666
Q ss_pred HHHHHHHHHHHHH---Hhhccch--hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCc
Q 038282 117 IILLVSWIGHLLI---AFNVPGG--LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDD 170 (234)
Q Consensus 117 ~~~~~~~i~~~ll---~~~~~~~--l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g 170 (234)
+..++.+++.+++ ....+.. ++ +..++.|...+...++..++...+.-++. ..|
T Consensus 294 i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G 373 (491)
T PRK11010 294 IFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAG 373 (491)
T ss_pred HHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555444433222 1211111 11 33333444444445555555555444431 146
Q ss_pred cccccccccHHHHH-HHHHHHHHHHHHHHHH
Q 038282 171 LNCIGVECFKLSFI-MTAATLFSAFVSLILV 200 (234)
Q Consensus 171 ~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l~ 200 (234)
++.|.. +|+..|. .+++++.+.++...++
T Consensus 374 ~l~~~~-G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 374 WFVEAH-GWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHh-ChHHHHHHHHHHHHHHHHHHHHHH
Confidence 666655 5999998 8888888877776553
No 96
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.21 E-value=9.8e-06 Score=75.30 Aligned_cols=118 Identities=15% Similarity=0.185 Sum_probs=86.3
Q ss_pred hccHHHHHHHHHHHHhhhhHHhHHhhHHHHHH-hhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHH
Q 038282 48 LFSMDMLILFLATICGVGGTLLAIDNLRQIGT-SLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVS 122 (234)
Q Consensus 48 lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~-~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~ 122 (234)
+-.+.+|.-+++++.+-..=.....-.+.+.+ +.|+|+.|.+.+.++..+...++|+..|+ +|.|+++.+..++.
T Consensus 31 ~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~ 110 (462)
T PRK15034 31 IARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAIL 110 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 44456777666655443333333334555555 68999999999999999999999999999 78888888877777
Q ss_pred HHHHHHHHhh-----ccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 123 WIGHLLIAFN-----VPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 123 ~i~~~ll~~~-----~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
.+..++...+ .+.. ++ +.|++ |+.++.....+++.|..|+.++
T Consensus 111 ~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~ 163 (462)
T PRK15034 111 IIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGS 163 (462)
T ss_pred HHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHH
Confidence 7766665543 2222 21 88887 7788888889999999888886
No 97
>PRK12382 putative transporter; Provisional
Probab=98.20 E-value=8.6e-06 Score=73.03 Aligned_cols=127 Identities=13% Similarity=0.098 Sum_probs=90.1
Q ss_pred HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccchh-h----hH
Q 038282 70 AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGGL-N----IM 140 (234)
Q Consensus 70 ~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~l-~----l~ 140 (234)
+..+.+.+.++.|.++ .+...+..+++..++++++|+ +|+++.+.....+.+++.+++....+... + +.
T Consensus 235 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (392)
T PRK12382 235 IGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALT 312 (392)
T ss_pred HHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 3445667777777764 455667778888999999998 67788777777777777665544322221 1 78
Q ss_pred hhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCccccccccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 141 GFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDDLNCIGVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 141 G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
|+++|...+.....+.+.+++++.++. ..|.+.|. .+|+..|+ .+++.+++.++.+..
T Consensus 313 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 313 GAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATS-FGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHhh
Confidence 888888888888888999998888763 14455444 35999999 888887777666543
No 98
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.18 E-value=2.6e-06 Score=77.15 Aligned_cols=154 Identities=16% Similarity=0.083 Sum_probs=105.9
Q ss_pred HHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHH
Q 038282 45 LQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILL 120 (234)
Q Consensus 45 ~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~ 120 (234)
+...|++.|+.+++..++...........++.+.++.+.++.+.+.+.+...+...++.+++|+ +|||+.+.....
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~ 90 (417)
T PRK10489 11 SLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARG 90 (417)
T ss_pred HHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHH
Confidence 4455789999888776666555444455677788888889999999999999999999999998 789988777666
Q ss_pred HHHHHHHHHHh----hcc-ch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---Ccccc
Q 038282 121 VSWIGHLLIAF----NVP-GG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNC 173 (234)
Q Consensus 121 ~~~i~~~ll~~----~~~-~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~ 173 (234)
+.+++.+.+.. ..+ .. ++ +.|++.|...+...+++.+.+..++.++. | ++.+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~ 170 (417)
T PRK10489 91 TCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLI 170 (417)
T ss_pred HHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHH
Confidence 66555443321 111 12 22 66777777777777888899988777652 1 33333
Q ss_pred ccccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 174 IGVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 174 d~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
+ ..+|++.|+ .+...+++.++.+.+
T Consensus 171 ~-~~~~~~~~~~~~~~~~~~~~~~~~l 196 (417)
T PRK10489 171 A-AGGVAWNYGLAAAGTFITLLPLLRL 196 (417)
T ss_pred H-HHhhHHHHHHHHHHHHHHHHHHHhC
Confidence 3 346788888 666666555544433
No 99
>PRK15075 citrate-proton symporter; Provisional
Probab=98.18 E-value=2.7e-05 Score=71.18 Aligned_cols=122 Identities=10% Similarity=0.071 Sum_probs=78.9
Q ss_pred HHHhccHHHHHHHHHH-HHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHH
Q 038282 45 LQALFSMDMLILFLAT-ICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTII 118 (234)
Q Consensus 45 ~~~lk~~~F~~l~~~~-~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~ 118 (234)
++..++++.|...... ++.......+..+.+.+.++ .|++..++....++.++++.++++++|+ +|||+.+...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~ 310 (434)
T PRK15075 231 RSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAF 310 (434)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 3445566666543322 22233333455678888876 6999998888888899999999999999 7888876655
Q ss_pred HHHHHHHHH-HH-Hh-hccch--h---h-hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 119 LLVSWIGHL-LI-AF-NVPGG--L---N-IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 119 ~~~~~i~~~-ll-~~-~~~~~--l---~-l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
.++..+... .+ .. ..+.. . . +.+++.|...+...+++.|.+..+..++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~ 367 (434)
T PRK15075 311 TVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTA 367 (434)
T ss_pred HHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccch
Confidence 444332211 11 11 11111 1 1 5677888777777788899999887776
No 100
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.17 E-value=3.9e-05 Score=69.41 Aligned_cols=149 Identities=13% Similarity=0.137 Sum_probs=92.2
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhH-HHHHHhhCCChhhHHHHHHHHHHhcccccccccc-cch--HHHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNL-RQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF-FRR--PLMLTII 118 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~-~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~-~gr--~~~l~~~ 118 (234)
...+.+|+|.+|...+..++..........+. +.+.++.|++..+.+.+.+..++++.+|+++.|+ .+| ++.+...
T Consensus 208 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~ 287 (394)
T PRK10213 208 NTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGA 287 (394)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHH
Confidence 35688999999987665544444333344455 5566678999999999999999999999999998 222 2322332
Q ss_pred HHH-HHHHHHHHHhhccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCcccccc
Q 038282 119 LLV-SWIGHLLIAFNVPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDDLNCIG 175 (234)
Q Consensus 119 ~~~-~~i~~~ll~~~~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~ 175 (234)
..+ .+.++++........ ++ +.|++++...+..++.+.+... ++.++. .+|.++|.
T Consensus 288 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~ 366 (394)
T PRK10213 288 PLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDN 366 (394)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 222 222333322222222 21 7888998888888877777664 332221 26677775
Q ss_pred ccccHHHHH-HHHHHHHHH
Q 038282 176 VECFKLSFI-MTAATLFSA 193 (234)
Q Consensus 176 ~g~Y~~~f~-~a~~~~va~ 193 (234)
. +|...++ .+++.++..
T Consensus 367 ~-g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 367 I-GLTSPLMLSGTLMLLTA 384 (394)
T ss_pred c-ChhhHHHHHHHHHHHHH
Confidence 4 4666676 555444444
No 101
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.17 E-value=1.4e-05 Score=74.16 Aligned_cols=115 Identities=7% Similarity=-0.047 Sum_probs=73.5
Q ss_pred HHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHH
Q 038282 45 LQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILL 120 (234)
Q Consensus 45 ~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~ 120 (234)
+..+||+.|+.+++..++..............+.+....++...+.+.++.++...++.+++++ +|+|+.+.....
T Consensus 225 ~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~ 304 (473)
T PRK10429 225 ALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASI 304 (473)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 3455888888777766655443333323333344443334455566777777888889899998 799998877766
Q ss_pred HHHHHHHHHHh----hcc-chh-h----hHhhhhhchhhhhHHHHHHhh
Q 038282 121 VSWIGHLLIAF----NVP-GGL-N----IMGFNFGAQWPLVFAITSEFF 159 (234)
Q Consensus 121 ~~~i~~~ll~~----~~~-~~l-~----l~G~~~G~~~~~~p~l~~~~f 159 (234)
+.+++.+.+.. ... ..+ + +.|++.+...+..+++++|..
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~i 353 (473)
T PRK10429 305 FPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTV 353 (473)
T ss_pred HHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 65554433322 111 122 1 778999999999999999983
No 102
>PRK10054 putative transporter; Provisional
Probab=98.15 E-value=1.7e-05 Score=71.85 Aligned_cols=155 Identities=9% Similarity=-0.043 Sum_probs=98.7
Q ss_pred CCHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHH---HhhCCChhhHHHHHHHHHHhcccccccccc----cchHHH
Q 038282 42 YTILQALFSMDMLILFLATICGVGGTLLAIDNLRQIG---TSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLM 114 (234)
Q Consensus 42 ~~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~---~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~ 114 (234)
.+.++.+|++++|.+.+..++............+.+. ++.+.+....+..+++.++.....+...|+ .++++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 276 (395)
T PRK10054 197 WSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPL 276 (395)
T ss_pred hhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhH
Confidence 3457889999999877766654443322222233333 445777777778888888888888877777 566777
Q ss_pred HHHHHHHHHHHHHHHHhhc-cch-h--h--hHhhhhhchhhhhHHHHHHhhCCCCCCCC----------------CCccc
Q 038282 115 LTIILLVSWIGHLLIAFNV-PGG-L--N--IMGFNFGAQWPLVFAITSEFFGPKNHKEP----------------EDDLN 172 (234)
Q Consensus 115 l~~~~~~~~i~~~ll~~~~-~~~-l--~--l~G~~~G~~~~~~p~l~~~~fG~~~~~~~----------------g~g~~ 172 (234)
+...+.+..+++.++.... +.. + . ++|++.+...+.....+.+.-..+..++. .+|.+
T Consensus 277 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~~Gp~~~G~l 356 (395)
T PRK10054 277 MTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQSLGWLGAAINPLVSGVI 356 (395)
T ss_pred HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHHHHHHHHHHHHHHHHHH
Confidence 7777777777665554422 222 2 1 77777777677766677676666555543 26667
Q ss_pred cccccccHHHHH-HHHHHHHHHHHHH
Q 038282 173 CIGVECFKLSFI-MTAATLFSAFVSL 197 (234)
Q Consensus 173 ~d~~g~Y~~~f~-~a~~~~va~~l~l 197 (234)
+|.. +|...|. .+.+..++.++.+
T Consensus 357 ~~~~-g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 357 LTTL-PPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HHHc-ChhhHHHHHHHHHHHHHHHHH
Confidence 7766 6667777 6666666665554
No 103
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.15 E-value=1.5e-05 Score=74.30 Aligned_cols=132 Identities=11% Similarity=0.023 Sum_probs=98.5
Q ss_pred HHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh---
Q 038282 67 TLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN--- 138 (234)
Q Consensus 67 ~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~--- 138 (234)
...+...+|++.++.|.+..+.+++.+.+.++..++.+.+|+ +|||+.+....++..++.++...+.+.. ++
T Consensus 22 ~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r 101 (495)
T PRK14995 22 ATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATR 101 (495)
T ss_pred HHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 333455688999999999999999999999999999999998 8999999999988888877766544332 22
Q ss_pred -hHhhhhhchhhhhHHHHHHhh-CCCCCCCC--------------C---CccccccccccHHHHH-HHHHHHHHHHHHHH
Q 038282 139 -IMGFNFGAQWPLVFAITSEFF-GPKNHKEP--------------E---DDLNCIGVECFKLSFI-MTAATLFSAFVSLI 198 (234)
Q Consensus 139 -l~G~~~G~~~~~~p~l~~~~f-G~~~~~~~--------------g---~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~ 198 (234)
+.|++.|...+.....+.+.+ ..++.++. | ++.+.+ ..+|++.|+ ...++++..++...
T Consensus 102 ~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~-~~gwr~~f~i~~~~~~~~~~l~~~ 180 (495)
T PRK14995 102 ALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE-HFYWGSVFLINVPIVLVVMGLTAR 180 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCChHHHHHHHHHHHHHHHHHHHH
Confidence 789998888877777777776 55655542 1 344333 457999999 77777766655544
Q ss_pred H
Q 038282 199 L 199 (234)
Q Consensus 199 l 199 (234)
.
T Consensus 181 ~ 181 (495)
T PRK14995 181 Y 181 (495)
T ss_pred h
Confidence 3
No 104
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.15 E-value=1.6e-05 Score=72.16 Aligned_cols=116 Identities=20% Similarity=0.130 Sum_probs=79.8
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHH
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTII 118 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~ 118 (234)
.++.+|+|.||.+.+..++............+.+.+. .| ++.+.+.+.++..+...++.+++|+ +|+++.+...
T Consensus 215 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~ 293 (437)
T TIGR00792 215 FKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGG 293 (437)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 4677899999987776665544433322223334443 24 4556677777888999999999998 7888888887
Q ss_pred HHHHHHHHHHHHhhcc-chh----h-hHhhhhhchhhhhHHHHHHhhC
Q 038282 119 LLVSWIGHLLIAFNVP-GGL----N-IMGFNFGAQWPLVFAITSEFFG 160 (234)
Q Consensus 119 ~~~~~i~~~ll~~~~~-~~l----~-l~G~~~G~~~~~~p~l~~~~fG 160 (234)
.++.+++.+++..... ... . +.|++.|...+...++++|..+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 341 (437)
T TIGR00792 294 ILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVD 341 (437)
T ss_pred HHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 7777777665554222 121 1 7788999999999999888754
No 105
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.15 E-value=3.9e-05 Score=71.33 Aligned_cols=129 Identities=14% Similarity=0.129 Sum_probs=89.7
Q ss_pred HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh----hH
Q 038282 70 AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN----IM 140 (234)
Q Consensus 70 ~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l~ 140 (234)
....++++.++.|+|..+.+.+.+...++..++.++.|+ +|||+++....++.+++.++.....+.. ++ +.
T Consensus 55 ~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~ 134 (476)
T PLN00028 55 AAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFI 134 (476)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 344567788889999999999888898999999999999 7999888877777776665555433322 22 67
Q ss_pred hhhhhchhhhhHHHHHHhhCCCCCCCC----------CC-------cccc--------ccccccHHHHH-HHHHHHHHHH
Q 038282 141 GFNFGAQWPLVFAITSEFFGPKNHKEP----------ED-------DLNC--------IGVECFKLSFI-MTAATLFSAF 194 (234)
Q Consensus 141 G~~~G~~~~~~p~l~~~~fG~~~~~~~----------g~-------g~~~--------d~~g~Y~~~f~-~a~~~~va~~ 194 (234)
|++.+... .....++++|..++.+.. |. ..+. +...+|+.+|+ .+++.++.++
T Consensus 135 G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l 213 (476)
T PLN00028 135 GFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGI 213 (476)
T ss_pred HHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHH
Confidence 77777543 344567899988877752 10 1111 11237999999 8887777666
Q ss_pred HHHHH
Q 038282 195 VSLIL 199 (234)
Q Consensus 195 l~l~l 199 (234)
+.+.+
T Consensus 214 ~~~~~ 218 (476)
T PLN00028 214 LVLTL 218 (476)
T ss_pred HHHHH
Confidence 65554
No 106
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.13 E-value=6.2e-06 Score=72.03 Aligned_cols=123 Identities=16% Similarity=0.107 Sum_probs=90.8
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHH-hhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAI-DNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~-~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
.++.+|+|.+|.+.+..++......... ...+.+.++ .|.++.+.+.+.+..+++..+++++.|+ .+|++.+..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 282 (365)
T TIGR00900 203 IKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTG 282 (365)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHH
Confidence 4567899999987776665554444444 556677776 6999999999999999999999999998 677777776
Q ss_pred HHHHHHHHHHHHHhhcc-chh----h-hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 118 ILLVSWIGHLLIAFNVP-GGL----N-IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 118 ~~~~~~i~~~ll~~~~~-~~l----~-l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
...+.+++++++....+ ... . +.|++.+...+...+++.|.++.++.++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 337 (365)
T TIGR00900 283 AIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGR 337 (365)
T ss_pred HHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 66666666655544332 221 1 8899999998999999999988776554
No 107
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.12 E-value=3.9e-05 Score=71.80 Aligned_cols=145 Identities=10% Similarity=0.096 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHhhhhHHhHHhhHHHHHH-hhCCChhhHHHHHHHHHHhcccccccccc-----cchHHHHHHHHHHHHH
Q 038282 51 MDMLILFLATICGVGGTLLAIDNLRQIGT-SLGYPKRGISTFVSLVNIWNCLGRVVSGF-----FRRPLMLTIILLVSWI 124 (234)
Q Consensus 51 ~~F~~l~~~~~~~~~~~~~~~~~~~~~~~-~~G~s~~~aa~~~si~~i~~~vGRl~~G~-----~gr~~~l~~~~~~~~i 124 (234)
+.+|.++...++.....+.+...++.+.+ +.|.++.+++++.+.+.+...+.-++.|+ +|||+++....++.++
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~ 93 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAI 93 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHH
Confidence 45777776666666666666666777665 57999999998888888777777788888 6999999999999998
Q ss_pred HHHHHHhhcc-ch-hh----hHhhhhhchhhhhHHHHHHhhCCCCC--CCC--------------C---Ccccccccccc
Q 038282 125 GHLLIAFNVP-GG-LN----IMGFNFGAQWPLVFAITSEFFGPKNH--KEP--------------E---DDLNCIGVECF 179 (234)
Q Consensus 125 ~~~ll~~~~~-~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~--~~~--------------g---~g~~~d~~g~Y 179 (234)
+.+++..+.. .. ++ +.|++.|...+..+++++|.|..++. ++. | .+++.+. .+|
T Consensus 94 g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~-~gw 172 (489)
T PRK10207 94 GYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK-FGY 172 (489)
T ss_pred HHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh-hCh
Confidence 8877665432 22 22 88999999999999999999976642 221 1 4444333 369
Q ss_pred HHHHH-HHHHHHHHHHHH
Q 038282 180 KLSFI-MTAATLFSAFVS 196 (234)
Q Consensus 180 ~~~f~-~a~~~~va~~l~ 196 (234)
+..|+ .++...++.+..
T Consensus 173 ~~~F~i~~i~~~~~~~~~ 190 (489)
T PRK10207 173 SVTYNLCGAGLIIALLVY 190 (489)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 99998 655444444333
No 108
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.11 E-value=2e-05 Score=80.35 Aligned_cols=154 Identities=15% Similarity=0.045 Sum_probs=103.8
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc-c---chHHHHHHH
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF-F---RRPLMLTII 118 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~-~---gr~~~l~~~ 118 (234)
++.+.+++.+|.+.+.+++.......+..+++.+.++ .|.++.+++.+.+..+++.++|.++.|+ . .+++.+...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~ 297 (1140)
T PRK06814 218 LKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIG 297 (1140)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHH
Confidence 5677899999998887766655555556678888877 5999999999999999999999999999 2 222333322
Q ss_pred HHHHHHHHHHHHhh--------------------ccchh----h-hHhhhhhchhhhhHHHHHHhhCCCCCCCC------
Q 038282 119 LLVSWIGHLLIAFN--------------------VPGGL----N-IMGFNFGAQWPLVFAITSEFFGPKNHKEP------ 167 (234)
Q Consensus 119 ~~~~~i~~~ll~~~--------------------~~~~l----~-l~G~~~G~~~~~~p~l~~~~fG~~~~~~~------ 167 (234)
.++.+++.+.+... .+.+. + ++|++.|...+...+++.+.+..++.+++
T Consensus 298 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~ 377 (1140)
T PRK06814 298 ALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNV 377 (1140)
T ss_pred HHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHH
Confidence 22222222211110 11111 1 78888898888899999999999999985
Q ss_pred -----------CCccccccccccHHHHH-HHHHHHHHHHHHH
Q 038282 168 -----------EDDLNCIGVECFKLSFI-MTAATLFSAFVSL 197 (234)
Q Consensus 168 -----------g~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l 197 (234)
..+.+.+...++...|+ .+.+.++.+++.+
T Consensus 378 ~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (1140)
T PRK06814 378 LNAAFMVAGTIILALLQALGFSIPWIILFIALANLIVAILIL 419 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHH
Confidence 13344445567777777 5555455444433
No 109
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.10 E-value=1.8e-05 Score=73.04 Aligned_cols=126 Identities=12% Similarity=0.131 Sum_probs=90.6
Q ss_pred hhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh-----hHh
Q 038282 72 DNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN-----IMG 141 (234)
Q Consensus 72 ~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~-----l~G 141 (234)
...+++.++.|.+..+.+...++..++..++.+++|+ +|||+++....++.+++.++.....+.. ++ +.|
T Consensus 40 ~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G 119 (455)
T TIGR00892 40 VFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITG 119 (455)
T ss_pred hhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4577888899999999999999999888999999999 8999988888877777766655433322 22 557
Q ss_pred hhhhchhhhhHHHHHHhhCCCCCCCC----------C-------CccccccccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 142 FNFGAQWPLVFAITSEFFGPKNHKEP----------E-------DDLNCIGVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 142 ~~~G~~~~~~p~l~~~~fG~~~~~~~----------g-------~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
++.|...+....++.++|. ++.++. + .+.+.+ ..+|+.+|+ .+++.+++.++.+++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~-~~gwr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 120 LGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFE-SFGWRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred hcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHH-HhChHHHHHHHHHHHHHHHHHHHHh
Confidence 8888766666677889995 454442 0 223333 347999999 887777666555444
No 110
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.09 E-value=2.5e-05 Score=68.83 Aligned_cols=88 Identities=19% Similarity=0.197 Sum_probs=66.9
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
+..+.+++|++|.+.+..++.......+..+.+.+.++ .|.++.+++.+.++..+.+.++++++|+ +|+++.+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~ 296 (366)
T TIGR00886 217 DQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLM 296 (366)
T ss_pred HHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHH
Confidence 45778999999988877666555555566678888876 5999999999999999999999999999 677776666
Q ss_pred HHHHHHHHHHHHH
Q 038282 118 ILLVSWIGHLLIA 130 (234)
Q Consensus 118 ~~~~~~i~~~ll~ 130 (234)
.+....++..++.
T Consensus 297 ~~~~~~~~~~~~~ 309 (366)
T TIGR00886 297 SFLGVAMGAFLVV 309 (366)
T ss_pred HHHHHHHHHHHHH
Confidence 5555555444443
No 111
>PRK12382 putative transporter; Provisional
Probab=98.08 E-value=3.6e-05 Score=68.96 Aligned_cols=121 Identities=16% Similarity=0.131 Sum_probs=86.5
Q ss_pred HhccHHHHHHHHHHHHhhhhHHhHHhhHHHH-HHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHH
Q 038282 47 ALFSMDMLILFLATICGVGGTLLAIDNLRQI-GTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLV 121 (234)
Q Consensus 47 ~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~-~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~ 121 (234)
...++.+|.+++..++......+....++.+ .++.|.|+.+.+.+.+...+...++.+++|+ +|||+.+....+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~ 90 (392)
T PRK12382 11 SSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLA 90 (392)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHH
Confidence 4455667777766665544433445566654 4678999999999999999999999999999 8999988877666
Q ss_pred HHHHHHHH---Hh-hc----cch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC
Q 038282 122 SWIGHLLI---AF-NV----PGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP 167 (234)
Q Consensus 122 ~~i~~~ll---~~-~~----~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~ 167 (234)
..++.+.. .. .. +.. ++ +.|++.+...+...+.+.|.+..|+.++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a 149 (392)
T PRK12382 91 CGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKV 149 (392)
T ss_pred HHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchh
Confidence 55443221 11 10 111 12 78888888888788888999998888874
No 112
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.08 E-value=1.6e-05 Score=71.16 Aligned_cols=117 Identities=12% Similarity=0.026 Sum_probs=90.1
Q ss_pred cHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHH
Q 038282 50 SMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIG 125 (234)
Q Consensus 50 ~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~ 125 (234)
++.+|.++...++...........++.+.++.|.|+.+.+.+.+...++..++.+++|+ +|||+.+....++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~ 84 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAG 84 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45577777777665555444567789999999999999999999999999999999999 89999988888888777
Q ss_pred HHHHHhhccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 126 HLLIAFNVPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 126 ~~ll~~~~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
.++.....+.. ++ +.|++.|...+...+.+.+....++.++
T Consensus 85 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (381)
T PRK03633 85 CAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGR 130 (381)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 76655543322 22 7788888888777777777776666554
No 113
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.06 E-value=2.4e-05 Score=70.80 Aligned_cols=115 Identities=17% Similarity=0.137 Sum_probs=84.5
Q ss_pred HHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHH
Q 038282 53 MLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLL 128 (234)
Q Consensus 53 F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~l 128 (234)
++..+++.++...........++++.++.|.|+.+.+.+.++.+++..++.+++|+ +|||+.+....++.+++.++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~ 94 (402)
T TIGR00897 15 LLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAA 94 (402)
T ss_pred hhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 44455555555544444556788888999999999999999999999999999998 89999998888887776543
Q ss_pred HH-hh--cc-ch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC
Q 038282 129 IA-FN--VP-GG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP 167 (234)
Q Consensus 129 l~-~~--~~-~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~ 167 (234)
.. .. .+ .. ++ +.|++.+...+...+.+.+.+..++.++.
T Consensus 95 ~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~ 142 (402)
T TIGR00897 95 FIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSA 142 (402)
T ss_pred HHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHH
Confidence 32 11 11 11 12 66888777777777778888888887763
No 114
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.05 E-value=6.5e-05 Score=69.39 Aligned_cols=127 Identities=15% Similarity=0.145 Sum_probs=90.7
Q ss_pred hHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhh-----ccch-hh----
Q 038282 73 NLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFN-----VPGG-LN---- 138 (234)
Q Consensus 73 ~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~-----~~~~-l~---- 138 (234)
..+++.++.|+++.+.+++.+...++..++.+++|+ +|||+++....++.+++.+++... .+.. ++
T Consensus 51 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 130 (467)
T PRK09556 51 AQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWA 130 (467)
T ss_pred hhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 467788899999999999999999999999999999 899998887776666554443321 1211 21
Q ss_pred hHhhhhhchhhhhHHHHHHhhCCCCCCCC----------C---C----ccccc--cccccHHHHH-HHHHHHHHHHHHHH
Q 038282 139 IMGFNFGAQWPLVFAITSEFFGPKNHKEP----------E---D----DLNCI--GVECFKLSFI-MTAATLFSAFVSLI 198 (234)
Q Consensus 139 l~G~~~G~~~~~~p~l~~~~fG~~~~~~~----------g---~----g~~~d--~~g~Y~~~f~-~a~~~~va~~l~l~ 198 (234)
+.|++.|..++....++++.|..++.++. | + .+... ..++++..|. .+.+.++.+++.+.
T Consensus 131 l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~ 210 (467)
T PRK09556 131 LSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLR 210 (467)
T ss_pred HHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999988863 1 1 11111 1235777777 66666655555444
Q ss_pred H
Q 038282 199 L 199 (234)
Q Consensus 199 l 199 (234)
+
T Consensus 211 ~ 211 (467)
T PRK09556 211 Y 211 (467)
T ss_pred h
Confidence 3
No 115
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.05 E-value=7e-05 Score=70.25 Aligned_cols=146 Identities=14% Similarity=0.101 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----c-chHHHHHHHHHHHHH
Q 038282 51 MDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----F-RRPLMLTIILLVSWI 124 (234)
Q Consensus 51 ~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~-gr~~~l~~~~~~~~i 124 (234)
+.+|.++...+......+.+...++.+.++ .|+++.+++.+.+...+...++.++.|+ + |||+++.+..++..+
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~l 88 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAI 88 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHH
Confidence 456766666666556666666677877665 6999999999999999999999999999 5 999999998888888
Q ss_pred HHHHHHhhcc--chhh----hHhhhhhchhhhhHHHHHHhhCCCC--CCCC----------C-------Ccccccccccc
Q 038282 125 GHLLIAFNVP--GGLN----IMGFNFGAQWPLVFAITSEFFGPKN--HKEP----------E-------DDLNCIGVECF 179 (234)
Q Consensus 125 ~~~ll~~~~~--~~l~----l~G~~~G~~~~~~p~l~~~~fG~~~--~~~~----------g-------~g~~~d~~g~Y 179 (234)
+.+++..... ..++ +..++.|...+..+++++|.|..++ ..+. | .+++. ...+|
T Consensus 89 g~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~-~~~Gw 167 (493)
T PRK15462 89 GHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQ-EEYSW 167 (493)
T ss_pred HHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHH-hhhCh
Confidence 8766654221 1122 5567778888888999999998652 3221 1 23322 23469
Q ss_pred HHHHH-HHHHHHHHHHHHH
Q 038282 180 KLSFI-MTAATLFSAFVSL 197 (234)
Q Consensus 180 ~~~f~-~a~~~~va~~l~l 197 (234)
+..|. ++...+++.+..+
T Consensus 168 ~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 168 AMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 99998 6665555554443
No 116
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.05 E-value=4.7e-05 Score=68.32 Aligned_cols=117 Identities=14% Similarity=0.023 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHhhhhHHhHHhhHHHHH-HhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHH
Q 038282 51 MDMLILFLATICGVGGTLLAIDNLRQIG-TSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIG 125 (234)
Q Consensus 51 ~~F~~l~~~~~~~~~~~~~~~~~~~~~~-~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~ 125 (234)
+.+..+.+..+.......+....++.+. ++.|.|+.+.+.+.+...+...++.+++|+ +|||+++....++.+++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALS 94 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHH
Confidence 3455556655555555444555677654 567999999999999999999999999999 89999999888777655
Q ss_pred HHHHHh---hcc-----c-hhh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC
Q 038282 126 HLLIAF---NVP-----G-GLN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP 167 (234)
Q Consensus 126 ~~ll~~---~~~-----~-~l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~ 167 (234)
...... ... . .++ +.|++.+...+....++.+.+..|+.++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~ 149 (399)
T PRK05122 95 GLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRV 149 (399)
T ss_pred HHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccc
Confidence 433322 111 1 111 88899998888888888999988888764
No 117
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.04 E-value=2.1e-05 Score=71.96 Aligned_cols=157 Identities=11% Similarity=0.032 Sum_probs=105.3
Q ss_pred HHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhh----CCChhhHHHHHHHHHHhcccccccccc----cchHHHHH
Q 038282 45 LQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSL----GYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLT 116 (234)
Q Consensus 45 ~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~----G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~ 116 (234)
.+.+|+|+||.+.+............-.+.+.+.++. +.++...+.++|+--+.++..-.+..+ +|.|+.+.
T Consensus 214 ~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Ll 293 (412)
T PF01306_consen 214 LSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLL 293 (412)
T ss_dssp HHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
T ss_pred HHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHH
Confidence 4788999999866544333333332323455555544 445556677888888888888888887 78899998
Q ss_pred HHHHHHHHHHHHHHhhccchh---h--hHhhhhhchhhhhHHHHHHhhCCCCCCCC------------------CCcccc
Q 038282 117 IILLVSWIGHLLIAFNVPGGL---N--IMGFNFGAQWPLVFAITSEFFGPKNHKEP------------------EDDLNC 173 (234)
Q Consensus 117 ~~~~~~~i~~~ll~~~~~~~l---~--l~G~~~G~~~~~~p~l~~~~fG~~~~~~~------------------g~g~~~ 173 (234)
++.+++.+=+.+....++... . +.|+-.+......--++.+.|+.|-.++. .+|.+|
T Consensus 294 lag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~ly 373 (412)
T PF01306_consen 294 LAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLY 373 (412)
T ss_dssp HHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhH
Confidence 888887776666555444332 1 88888888888888899999998876542 277777
Q ss_pred ccccccHHHHH-HHHHHHHHHHHHHHHHhh
Q 038282 174 IGVECFKLSFI-MTAATLFSAFVSLILVLM 202 (234)
Q Consensus 174 d~~g~Y~~~f~-~a~~~~va~~l~l~l~~~ 202 (234)
|.. +|+.+|+ ++++.+...++..+..++
T Consensus 374 d~~-G~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 374 DRI-GFQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred hhc-CcHHHHHHHHHHHHHHHHHheeeecC
Confidence 776 6778888 888877777777665443
No 118
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.03 E-value=9.9e-05 Score=66.49 Aligned_cols=151 Identities=15% Similarity=0.048 Sum_probs=96.6
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc-cchH---HH-HHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF-FRRP---LM-LTI 117 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~-~gr~---~~-l~~ 117 (234)
..++.+|+|.+|.+.+..++.....+.+..+++++.++.|++.. ++...++..+...+|....+. .+|+ +. ...
T Consensus 184 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g~~~~~d~~~r~~~r~~~~~~ 262 (368)
T TIGR00903 184 EFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIGVAVIPDRVARAGLRSIYIRA 262 (368)
T ss_pred HHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHH
Confidence 35789999999999998888777777777889999988888864 556566666555555432222 3433 22 222
Q ss_pred HHHHHHHHHHHHHhhccch-h--h--hHhhhhhchhhhhHHHHHHhhCCCCCCCC----------C-------Ccccccc
Q 038282 118 ILLVSWIGHLLIAFNVPGG-L--N--IMGFNFGAQWPLVFAITSEFFGPKNHKEP----------E-------DDLNCIG 175 (234)
Q Consensus 118 ~~~~~~i~~~ll~~~~~~~-l--~--l~G~~~G~~~~~~p~l~~~~fG~~~~~~~----------g-------~g~~~d~ 175 (234)
..++.++.+.++....+.. . . +.+++.+..++...++.+|.|.++..++. + .+...
T Consensus 263 ~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~-- 340 (368)
T TIGR00903 263 AALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI-- 340 (368)
T ss_pred HHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh--
Confidence 3333333333333222221 1 1 56777777778788899999999998874 0 11111
Q ss_pred ccccHHHHH-HHHHHHHHHHHHH
Q 038282 176 VECFKLSFI-MTAATLFSAFVSL 197 (234)
Q Consensus 176 ~g~Y~~~f~-~a~~~~va~~l~l 197 (234)
.+....|. .++..+++++..+
T Consensus 341 -~~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 341 -SSAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred -cCHHHHHHHHHHHHHHHHHHHH
Confidence 26778888 7777777776653
No 119
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.03 E-value=3.8e-05 Score=70.53 Aligned_cols=130 Identities=16% Similarity=0.090 Sum_probs=86.3
Q ss_pred hhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhh--cc-ch-h--h---
Q 038282 72 DNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFN--VP-GG-L--N--- 138 (234)
Q Consensus 72 ~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~--~~-~~-l--~--- 138 (234)
.+.+.+.++.|.+...+.......++.+.++.++.|+ +|||+.+....++.+++.+++... .. .. . +
T Consensus 292 ~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~ 371 (479)
T PRK10077 292 YYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSML 371 (479)
T ss_pred HHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHH
Confidence 3456777788998877778888888999999999998 788998888888887776665432 11 11 1 1
Q ss_pred hHhhhhhch-hhhhHHHHHHhhCCCCCCCC----------C-------------CccccccccccHHHHH-HHHHHHHHH
Q 038282 139 IMGFNFGAQ-WPLVFAITSEFFGPKNHKEP----------E-------------DDLNCIGVECFKLSFI-MTAATLFSA 193 (234)
Q Consensus 139 l~G~~~G~~-~~~~p~l~~~~fG~~~~~~~----------g-------------~g~~~d~~g~Y~~~f~-~a~~~~va~ 193 (234)
+++++++.. .++...+++|.|+.++.++. + .++..|. .++...|+ .++.+++++
T Consensus 372 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 450 (479)
T PRK10077 372 FYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAH-FHNGFSYWIYGCMGVLAA 450 (479)
T ss_pred HHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhh-ccCccHHHHHHHHHHHHH
Confidence 444444433 36678899999998887753 0 1222222 33456777 777777776
Q ss_pred HHHHHHHhh
Q 038282 194 FVSLILVLM 202 (234)
Q Consensus 194 ~l~l~l~~~ 202 (234)
++.+.+..+
T Consensus 451 ~~~~~~~~e 459 (479)
T PRK10077 451 LFMWKFVPE 459 (479)
T ss_pred HHHHhcccc
Confidence 666554443
No 120
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.03 E-value=3.4e-05 Score=68.19 Aligned_cols=124 Identities=17% Similarity=0.125 Sum_probs=90.5
Q ss_pred CHHHHhccHH---HHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHH-Hhcccccccccc----cchHHH
Q 038282 43 TILQALFSMD---MLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVN-IWNCLGRVVSGF----FRRPLM 114 (234)
Q Consensus 43 ~~~~~lk~~~---F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~-i~~~vGRl~~G~----~gr~~~ 114 (234)
+.++.+|++. +|.+.+..++..........+.+++.++.|+++.+.+.+.++.+ +...+|.+++|+ +||++.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~ 277 (356)
T TIGR00901 198 PIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYA 277 (356)
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 3456677775 77666665555555555667888898889999999988888777 567899999998 788887
Q ss_pred HHHHHHHHHHHHHHHHhh--c--------c-ch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 115 LTIILLVSWIGHLLIAFN--V--------P-GG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 115 l~~~~~~~~i~~~ll~~~--~--------~-~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
+....++.+++..++... . + .. ++ +.+++.|...+...+++.+.+.+++.++
T Consensus 278 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~ 345 (356)
T TIGR00901 278 LLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGAT 345 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHH
Confidence 777776666655443321 1 1 12 11 6689999999999999999999888765
No 121
>TIGR00898 2A0119 cation transport protein.
Probab=98.01 E-value=2e-05 Score=73.17 Aligned_cols=158 Identities=15% Similarity=0.151 Sum_probs=99.5
Q ss_pred CCHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 42 YTILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 42 ~~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
.+.++++|+|.++...+...+...........+.....+.+.+... ...+.++...+++++.++ +|||+.+.+
T Consensus 314 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~ 390 (505)
T TIGR00898 314 YSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIYL---DLFISGLVELPAKLITLLLIDRLGRRYTMAA 390 (505)
T ss_pred CcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccCCChHH---HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 5778999999998876655443333222222233334445655433 333556777888888888 799999988
Q ss_pred HHHHHHHHHHHHHhhccc--hh----h-hHhhhhhchhhhhHHHHHHhhCCCCCCCC----------C---Ccccc-ccc
Q 038282 118 ILLVSWIGHLLIAFNVPG--GL----N-IMGFNFGAQWPLVFAITSEFFGPKNHKEP----------E---DDLNC-IGV 176 (234)
Q Consensus 118 ~~~~~~i~~~ll~~~~~~--~l----~-l~G~~~G~~~~~~p~l~~~~fG~~~~~~~----------g---~g~~~-d~~ 176 (234)
..++.+++++++...... .. . +.+++.+..+++...+++|+|+++..++. | +..+. ...
T Consensus 391 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~~~~ 470 (505)
T TIGR00898 391 SLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVYLGE 470 (505)
T ss_pred HHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHHHHH
Confidence 888888777666553222 21 1 66677777888888999999998877753 1 11111 112
Q ss_pred cccHHHHH-HHHHHHHHHHHHHHHHhh
Q 038282 177 ECFKLSFI-MTAATLFSAFVSLILVLM 202 (234)
Q Consensus 177 g~Y~~~f~-~a~~~~va~~l~l~l~~~ 202 (234)
.++..+++ .+++.+++.++.++++.+
T Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~lpet 497 (505)
T TIGR00898 471 KWLFLPLVLFGGLALLAGILTLFLPET 497 (505)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHcCcCC
Confidence 23445666 777777777777666543
No 122
>PRK10504 putative transporter; Provisional
Probab=97.99 E-value=0.00016 Score=66.56 Aligned_cols=122 Identities=11% Similarity=0.004 Sum_probs=88.7
Q ss_pred HHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHH
Q 038282 45 LQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIIL 119 (234)
Q Consensus 45 ~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~ 119 (234)
.+.+||+.|+..++..++............+.+.+. .|.++.+++..+....++..++++++|+ +|+++.+....
T Consensus 255 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~ 334 (471)
T PRK10504 255 LKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATT 334 (471)
T ss_pred HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHH
Confidence 468999999987776666554433333455666664 7999999999998888989999899998 78888888777
Q ss_pred HHHHHHHHHHHhhc-cch---h---h-hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 120 LVSWIGHLLIAFNV-PGG---L---N-IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 120 ~~~~i~~~ll~~~~-~~~---l---~-l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
.+.+++.+++.... ... . + +.|++.|..++....++.+.+..+..+.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 389 (471)
T PRK10504 335 LGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASS 389 (471)
T ss_pred HHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccc
Confidence 76666655544422 111 1 2 6678888888888888888888887775
No 123
>PRK15011 sugar efflux transporter B; Provisional
Probab=97.99 E-value=0.00011 Score=66.35 Aligned_cols=128 Identities=8% Similarity=0.049 Sum_probs=84.3
Q ss_pred HHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch--h-h--h
Q 038282 70 AIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG--L-N--I 139 (234)
Q Consensus 70 ~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~--l-~--l 139 (234)
...+.+.+.++ .|+++.+++.+.++..+...++++++|+ ++||+.+........+.+..+....... + . +
T Consensus 235 ~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 314 (393)
T PRK15011 235 YIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLL 314 (393)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 33467777654 6999988888888888888899999999 7888766655444444433333222221 1 1 5
Q ss_pred HhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCccccccccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 140 MGFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDDLNCIGVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 140 ~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
.+++.|...+..+....|.+..+ .++. ..|.+.|.. +|+..|+ .+++++++.++.+.+
T Consensus 315 ~~~~~g~~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIW-NYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhh
Confidence 56677777777778888888743 4532 145565543 6888888 777777777666544
No 124
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.99 E-value=6.2e-05 Score=70.20 Aligned_cols=85 Identities=21% Similarity=0.276 Sum_probs=69.0
Q ss_pred CCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhcc------ch-hh----hHhhhhhc
Q 038282 82 GYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVP------GG-LN----IMGFNFGA 146 (234)
Q Consensus 82 G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~------~~-l~----l~G~~~G~ 146 (234)
..++.+.+.+.+...++..+|.+++|+ +|||+++....++..++..+...... .. ++ +.|++.|.
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~ 131 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGG 131 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhh
Confidence 345667788999999999999999999 89999998888887777655544321 11 21 88999999
Q ss_pred hhhhhHHHHHHhhCCCCCCC
Q 038282 147 QWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 147 ~~~~~p~l~~~~fG~~~~~~ 166 (234)
..+..+.+++|.+..++.++
T Consensus 132 ~~~~~~~~~~e~~p~~~Rg~ 151 (502)
T TIGR00887 132 DYPLSAIITSEFATKKWRGA 151 (502)
T ss_pred hhHHHHHHHHHhcChhhHHH
Confidence 99999999999999999986
No 125
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=97.98 E-value=7.9e-06 Score=73.73 Aligned_cols=129 Identities=16% Similarity=0.069 Sum_probs=86.6
Q ss_pred HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHh---h-cc------c
Q 038282 70 AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAF---N-VP------G 135 (234)
Q Consensus 70 ~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~---~-~~------~ 135 (234)
+..+.+.+.++.|++..+++...++..+++.+++++.|+ ++||+.+...+++.+++.+++.. . .. .
T Consensus 303 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (481)
T TIGR00879 303 IMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSG 382 (481)
T ss_pred hHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchh
Confidence 345667777888999988889999999999999999998 78888888777777666555541 1 11 1
Q ss_pred h--hh---hHhhhhhc-hhhhhHHHHHHhhCCCCCCCC-----------------CCccccccccccHHHHH-HHHHHHH
Q 038282 136 G--LN---IMGFNFGA-QWPLVFAITSEFFGPKNHKEP-----------------EDDLNCIGVECFKLSFI-MTAATLF 191 (234)
Q Consensus 136 ~--l~---l~G~~~G~-~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~~g~Y~~~f~-~a~~~~v 191 (234)
. +. +++.+++. ..++...++.|.++.++.++. ..+.+.+. .+|...|+ .++++++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~-~~~~~~f~~~~~~~~~ 461 (481)
T TIGR00879 383 NVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES-IGVGGVFIFFGGLNVL 461 (481)
T ss_pred HHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCccceehhHHHHHHH
Confidence 1 11 33333333 335555667899998877652 13333333 34778888 8888887
Q ss_pred HHHHHHHH
Q 038282 192 SAFVSLIL 199 (234)
Q Consensus 192 a~~l~l~l 199 (234)
++++.+..
T Consensus 462 ~~i~~~~~ 469 (481)
T TIGR00879 462 GLIFVYFF 469 (481)
T ss_pred HHHHHhee
Confidence 77776554
No 126
>TIGR00898 2A0119 cation transport protein.
Probab=97.97 E-value=9.3e-06 Score=75.34 Aligned_cols=127 Identities=19% Similarity=0.221 Sum_probs=94.9
Q ss_pred hHHHHHHhhCCC---hhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccchh---h--hH
Q 038282 73 NLRQIGTSLGYP---KRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGGL---N--IM 140 (234)
Q Consensus 73 ~~~~~~~~~G~s---~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~l---~--l~ 140 (234)
..+.+.+|.+++ +.+.+.+.++..++..+|.+++|+ +|||+++.+..++.+++.++...+.+... . +.
T Consensus 111 ~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~ 190 (505)
T TIGR00898 111 FSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLV 190 (505)
T ss_pred ccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 345667788998 888999999999999999999999 89999998888888777766655433322 1 88
Q ss_pred hhhhhchhhhhHHHHHHhhCCCCCCCC----------C---CccccccccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 141 GFNFGAQWPLVFAITSEFFGPKNHKEP----------E---DDLNCIGVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 141 G~~~G~~~~~~p~l~~~~fG~~~~~~~----------g---~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
|++.|+..+...+++.|+++.++.+.. | ...+.....+|+..|+ .+...++..++.+++
T Consensus 191 G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~~~~~~ 263 (505)
T TIGR00898 191 GMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLSWFV 263 (505)
T ss_pred HhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999888753 1 0111001123888888 777666666555444
No 127
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.97 E-value=5.8e-06 Score=76.05 Aligned_cols=120 Identities=12% Similarity=0.142 Sum_probs=90.1
Q ss_pred hhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhc--cch-hh----hHhhhhhchh
Q 038282 80 SLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNV--PGG-LN----IMGFNFGAQW 148 (234)
Q Consensus 80 ~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~--~~~-l~----l~G~~~G~~~ 148 (234)
+.++++.+.+.+.+...++..++.+..|+ +|||+.+....++.+++.++...+. ... ++ +.|++.|..+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 56899999999999999999999999998 8999988888877776665543321 122 22 8899999999
Q ss_pred hhhHHHHHHhhCCCCCCCC-----------------CCccccccccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 149 PLVFAITSEFFGPKNHKEP-----------------EDDLNCIGVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 149 ~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
+....++++.+..++.++. ..+.+.+...+|+.+|+ .+...++..++.+..
T Consensus 150 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~ 218 (465)
T TIGR00894 150 PATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVF 218 (465)
T ss_pred hhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHH
Confidence 9999999999998887753 13344443357899999 777666555554443
No 128
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=97.93 E-value=0.00013 Score=63.98 Aligned_cols=123 Identities=15% Similarity=0.098 Sum_probs=79.4
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc-cc----hHHHHH-
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF-FR----RPLMLT- 116 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~-~g----r~~~l~- 116 (234)
.++.+|+|.+|.+.+..++.......+....+.+.++ .|.++.+++...++.++++.+|+++.|+ .+ +++...
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~ 288 (379)
T TIGR00881 209 LQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLA 288 (379)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHH
Confidence 4567899999988877766655555556677777765 6999999999999999999999999999 22 222222
Q ss_pred HH-HHHHHHHHHHHHhh-ccch-h---h--hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 117 II-LLVSWIGHLLIAFN-VPGG-L---N--IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 117 ~~-~~~~~i~~~ll~~~-~~~~-l---~--l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
.. .....+++..+... .... . . +.|+..++.......+..|.++.++.++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 346 (379)
T TIGR00881 289 VFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGT 346 (379)
T ss_pred HHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHH
Confidence 21 11222222222221 1111 1 1 5565555556666778889998887765
No 129
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.93 E-value=7.8e-05 Score=68.06 Aligned_cols=115 Identities=7% Similarity=-0.121 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHH
Q 038282 52 DMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHL 127 (234)
Q Consensus 52 ~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ 127 (234)
.++.++..+++............+.+.++.|.|+.+.+.+.+...++..++.+..|+ +|||+++...+++.+++.+
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~ 83 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAF 83 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 456655554443333222335667777788999999999999999999999999998 8999999999999888877
Q ss_pred HHHhhc---cchhh-----hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 128 LIAFNV---PGGLN-----IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 128 ll~~~~---~~~l~-----l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
+..... +...+ +.|++.|...+...+++.+....++.++
T Consensus 84 l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~ 130 (410)
T TIGR00885 84 LFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATR 130 (410)
T ss_pred HHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHH
Confidence 654321 22221 8899999999998888888876666553
No 130
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.93 E-value=7.6e-05 Score=71.35 Aligned_cols=154 Identities=16% Similarity=0.079 Sum_probs=108.3
Q ss_pred HHhccHHHHHHHHHHHHhhhhHHhH----HhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 46 QALFSMDMLILFLATICGVGGTLLA----IDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 46 ~~lk~~~F~~l~~~~~~~~~~~~~~----~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
...++++|+..+.++.+.....+.. ..-++.+.+|.|-++ ..+++.+...+.+.++-++.|. +|||+.++.
T Consensus 35 g~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~-~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~ 113 (599)
T PF06609_consen 35 GYYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSD-NWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFII 113 (599)
T ss_pred CceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCc-cchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHH
Confidence 3557888888776665544333222 234667788888875 4567777888888999999998 899999999
Q ss_pred HHHHHHHHHHHHHhhccchhh-----hHhhhhhchhhhhHHHHHHhhCCCCCCCC------------C-Cccc---cccc
Q 038282 118 ILLVSWIGHLLIAFNVPGGLN-----IMGFNFGAQWPLVFAITSEFFGPKNHKEP------------E-DDLN---CIGV 176 (234)
Q Consensus 118 ~~~~~~i~~~ll~~~~~~~l~-----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~------------g-~g~~---~d~~ 176 (234)
..++..+|..+...+.+...+ ++|++.|..... ...++|+...|+..-. . ++.. ....
T Consensus 114 g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~~-~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~ 192 (599)
T PF06609_consen 114 GSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQELA-ALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAH 192 (599)
T ss_pred HHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHHH-HHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccC
Confidence 999999999887765443222 889998888754 5558999987776531 1 1111 2235
Q ss_pred cccHHHHH-HHHHHHHHHHHHHHHHh
Q 038282 177 ECFKLSFI-MTAATLFSAFVSLILVL 201 (234)
Q Consensus 177 g~Y~~~f~-~a~~~~va~~l~l~l~~ 201 (234)
++||+.|+ .+....+++++.++...
T Consensus 193 ~~WRw~~~~~~i~~~i~~vl~~~fY~ 218 (599)
T PF06609_consen 193 SGWRWIFYIFIIWSGIALVLIFFFYF 218 (599)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhC
Confidence 78999999 88888887766655433
No 131
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=97.90 E-value=4.5e-05 Score=67.77 Aligned_cols=114 Identities=17% Similarity=0.206 Sum_probs=81.2
Q ss_pred HhhHHHHHH-hhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHH-Hhhccchh-h----h
Q 038282 71 IDNLRQIGT-SLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLI-AFNVPGGL-N----I 139 (234)
Q Consensus 71 ~~~~~~~~~-~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll-~~~~~~~l-~----l 139 (234)
....+.+.+ +.|.+..+.+.+.++.+++..+|+++.|+ ++|++.+....++.++....+ ....+... . +
T Consensus 258 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (405)
T TIGR00891 258 QDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFF 337 (405)
T ss_pred hhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHH
Confidence 345666665 46999999999999999999999999999 688887776665543332222 22122221 1 5
Q ss_pred HhhhhhchhhhhHHHHHHhhCCCCCCCC-----------------CCccccccccccHHHHH
Q 038282 140 MGFNFGAQWPLVFAITSEFFGPKNHKEP-----------------EDDLNCIGVECFKLSFI 184 (234)
Q Consensus 140 ~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~~g~Y~~~f~ 184 (234)
.+++.++..++.++++.|.++.++.++. ..|.+.|..|+|+.++.
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~ 399 (405)
T TIGR00891 338 QQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALA 399 (405)
T ss_pred HHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHH
Confidence 6677777888899999999998888763 15566777777877665
No 132
>TIGR00895 2A0115 benzoate transport.
Probab=97.90 E-value=8.2e-05 Score=65.69 Aligned_cols=115 Identities=17% Similarity=0.210 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHH
Q 038282 52 DMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHL 127 (234)
Q Consensus 52 ~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ 127 (234)
.++.+++..++............+.+.++.|.++.+++...++.+++..++++++|+ ++|+..+....+....+.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 330 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVL 330 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHH
Confidence 344444444444444434445667777788999999999999999999999999999 6777433333332322222
Q ss_pred HHHhhccch-h--h--hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 128 LIAFNVPGG-L--N--IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 128 ll~~~~~~~-l--~--l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
+.....+.. . . +.|++.+...+...+++.|.++.++.++
T Consensus 331 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 374 (398)
T TIGR00895 331 VGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRAT 374 (398)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHH
Confidence 222112211 2 1 8899999999999999999988776654
No 133
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=97.88 E-value=0.00012 Score=74.54 Aligned_cols=124 Identities=12% Similarity=0.018 Sum_probs=89.2
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChh-hHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKR-GISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~-~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
+++.++++.+|.+.+..++...........++.+.++ .|.+.. +.+.+.++.+++.++|.+++|+ +++++.+.+
T Consensus 225 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~ 304 (1146)
T PRK08633 225 LKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPL 304 (1146)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhH
Confidence 4567888888887766655554444455566777655 699988 8999999999999999999999 455555656
Q ss_pred HHHHHHHHHHHHHhhccch-h---h-hHhhhhhchhhhhHHHHHHhhCCCCCCCC
Q 038282 118 ILLVSWIGHLLIAFNVPGG-L---N-IMGFNFGAQWPLVFAITSEFFGPKNHKEP 167 (234)
Q Consensus 118 ~~~~~~i~~~ll~~~~~~~-l---~-l~G~~~G~~~~~~p~l~~~~fG~~~~~~~ 167 (234)
..++.+++++++....+.. + . ++|++.|...+...+++.+.+..++.++.
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~ 359 (1146)
T PRK08633 305 GALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKV 359 (1146)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhh
Confidence 6656655555554422221 1 1 78888888888888888999988888864
No 134
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=97.87 E-value=0.00013 Score=64.63 Aligned_cols=81 Identities=12% Similarity=0.096 Sum_probs=58.5
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHH-hhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHH
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGT-SLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTII 118 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~-~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~ 118 (234)
.++.+|++++|...+..++............+.+.. ..|.++.+.+...++.+++..+++++.|+ +|||+.+...
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~ 266 (377)
T PRK11102 187 FASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFG 266 (377)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 456888999887666554443333333344444444 46999999999999999999999999999 7888887776
Q ss_pred HHHHHH
Q 038282 119 LLVSWI 124 (234)
Q Consensus 119 ~~~~~i 124 (234)
..+..+
T Consensus 267 ~~~~~~ 272 (377)
T PRK11102 267 LWIQFI 272 (377)
T ss_pred HHHHHH
Confidence 655443
No 135
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=97.87 E-value=0.00017 Score=64.69 Aligned_cols=89 Identities=11% Similarity=0.126 Sum_probs=64.1
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHH-hhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGT-SLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~-~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
..++.+|++++|...+...+............+.+.+ +.|.++.+.+.+.+..++...+++++.|+ +||++.+..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~ 274 (392)
T PRK10473 195 ENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLT 274 (392)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 3467899999987665554443333333333344444 56999999999999999999999999998 788888888
Q ss_pred HHHHHHHHHHHHHh
Q 038282 118 ILLVSWIGHLLIAF 131 (234)
Q Consensus 118 ~~~~~~i~~~ll~~ 131 (234)
.+++..++.+++..
T Consensus 275 ~~~~~~~~~~~~~~ 288 (392)
T PRK10473 275 SQVLFLAAGITLAL 288 (392)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777766665554
No 136
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=97.86 E-value=0.00019 Score=63.44 Aligned_cols=123 Identities=15% Similarity=0.104 Sum_probs=85.3
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHH-hhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGT-SLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~-~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
+.++.+|++++|.+.+...+............+.+.+ +.|.++.+.+.+.+..+++..+++++.|+ +++++.+..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~ 277 (385)
T TIGR00710 198 TFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRM 277 (385)
T ss_pred HHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 3567889999998766555444433334444555555 57999999999999999999999999999 688887777
Q ss_pred HHHHHHHHHHHHHhh---c-cc-hh-h----hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 118 ILLVSWIGHLLIAFN---V-PG-GL-N----IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 118 ~~~~~~i~~~ll~~~---~-~~-~l-~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
...+..++..++... . +. .. + +.|++.+...+..+....|.++. +.++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~g~ 335 (385)
T TIGR00710 278 GLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPH-VAGT 335 (385)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-cchH
Confidence 666666555444331 1 11 11 1 67888888888888888887763 3443
No 137
>PRK09848 glucuronide transporter; Provisional
Probab=97.86 E-value=0.00024 Score=65.12 Aligned_cols=117 Identities=10% Similarity=0.012 Sum_probs=77.7
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHH
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTII 118 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~ 118 (234)
.++.+|||.|+.+.+..++............+.+.++ .|.++...........+...++.+++++ +|+++.+.+.
T Consensus 221 ~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g 300 (448)
T PRK09848 221 LQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIG 300 (448)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 5678999999987777666544433333344445554 4776655544444335566778888887 7888888888
Q ss_pred HHHHHHHHHHHHhhcc--chh-h----hHhhhhhchhhhhHHHHHHhhC
Q 038282 119 LLVSWIGHLLIAFNVP--GGL-N----IMGFNFGAQWPLVFAITSEFFG 160 (234)
Q Consensus 119 ~~~~~i~~~ll~~~~~--~~l-~----l~G~~~G~~~~~~p~l~~~~fG 160 (234)
.++.+++.+++..... .+. + +.|++.|...+...++.+|.-.
T Consensus 301 ~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~ 349 (448)
T PRK09848 301 ALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVE 349 (448)
T ss_pred HHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 8777777666554221 111 1 7788888888888888877764
No 138
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=97.83 E-value=0.00011 Score=67.39 Aligned_cols=123 Identities=19% Similarity=0.129 Sum_probs=90.1
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHH
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTII 118 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~ 118 (234)
..+.+|++.|+...+..++...........++.+.++ .|.++.+++...+..+++..++++++|+ ++|++.+...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g 327 (485)
T TIGR00711 248 DLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIG 327 (485)
T ss_pred CHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHH
Confidence 3568899999987776666555555555677888876 5999999999999999999999999998 7888888877
Q ss_pred HHHHHHHHHHHHh-hcc--c-h-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 119 LLVSWIGHLLIAF-NVP--G-G-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 119 ~~~~~i~~~ll~~-~~~--~-~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
..+.+++.+++.. ..+ . . .+ +.|++.|...+.......+.++.++.++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~ 384 (485)
T TIGR00711 328 LILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIAR 384 (485)
T ss_pred HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhH
Confidence 7777777766552 111 1 1 11 7888888887666666666666555443
No 139
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=97.82 E-value=7.4e-05 Score=67.30 Aligned_cols=126 Identities=10% Similarity=-0.076 Sum_probs=87.0
Q ss_pred HhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh----hHh
Q 038282 71 IDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN----IMG 141 (234)
Q Consensus 71 ~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l~G 141 (234)
...++.+.+|.|+|+.+.+.+.+.+.++..++.+.+|+ +|||+++.........+......+.+.. ++ +.|
T Consensus 11 ~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G 90 (368)
T TIGR00903 11 SPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAA 90 (368)
T ss_pred HhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 34678888999999999999999999999999999999 8988876655554444433222222222 21 888
Q ss_pred hhhhchhhhhHHHHHHhhCCCCCCCC----------C-------CccccccccccHHHHH-HHHHHHHHHHHHHH
Q 038282 142 FNFGAQWPLVFAITSEFFGPKNHKEP----------E-------DDLNCIGVECFKLSFI-MTAATLFSAFVSLI 198 (234)
Q Consensus 142 ~~~G~~~~~~p~l~~~~fG~~~~~~~----------g-------~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~ 198 (234)
++.|...+.. ..++|.+..|+.++. | ...+. ...+|+..|+ .+++.++.+++...
T Consensus 91 ~g~~~~~~~~-~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~-~~~gWr~~f~~~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 91 LGQPFLLNAF-APAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIY-TAGGLQLLIIPIAAVAAAGIILVLA 163 (368)
T ss_pred hHhHHHHHHH-HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccchHHHHHHHHHHHHHHHHHHHH
Confidence 8888654333 445888888877753 1 22222 2468999999 78877777665544
No 140
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.81 E-value=0.0002 Score=67.26 Aligned_cols=70 Identities=14% Similarity=0.011 Sum_probs=62.3
Q ss_pred CCHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc-cch
Q 038282 42 YTILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF-FRR 111 (234)
Q Consensus 42 ~~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~-~gr 111 (234)
..+.+++|+|+.|.+.+..+|.......+.+.++-+.++ .|+|+.++..+...+.++.++|-++.|+ .+|
T Consensus 264 ~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr 335 (495)
T KOG2533|consen 264 KGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDR 335 (495)
T ss_pred HHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHH
Confidence 446799999999999999999988888888899999988 5799999999999999999999999999 344
No 141
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=97.78 E-value=0.0001 Score=72.37 Aligned_cols=108 Identities=18% Similarity=0.159 Sum_probs=78.4
Q ss_pred HHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccc-hh---h-hHhhhhhchhhhhHHHHHHhhCC
Q 038282 91 FVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPG-GL---N-IMGFNFGAQWPLVFAITSEFFGP 161 (234)
Q Consensus 91 ~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~-~l---~-l~G~~~G~~~~~~p~l~~~~fG~ 161 (234)
...+.+++.++|.++.|+ +|||+++.++.++.+++++++....+. .+ . ++|++.++.++...++++|+|.+
T Consensus 600 ~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt 679 (742)
T TIGR01299 600 VNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPS 679 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence 355666888999999999 899999988888888877666553332 22 1 77888888888899999999999
Q ss_pred CCCCCC----------C-------CccccccccccHHHHH-HHHHHHHHHHHHHHHH
Q 038282 162 KNHKEP----------E-------DDLNCIGVECFKLSFI-MTAATLFSAFVSLILV 200 (234)
Q Consensus 162 ~~~~~~----------g-------~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l~ 200 (234)
+..++. | .+.+.+ .++..+|+ ++++.++++++.++++
T Consensus 680 ~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~--~~~~~pf~i~a~~lll~~ll~~~LP 734 (742)
T TIGR01299 680 DKRATAFGFLNALCKAAAVLGILIFGSFVG--ITKAAPILFASAALACGGLLALKLP 734 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 988763 1 223322 23566777 7777777777777664
No 142
>PTZ00207 hypothetical protein; Provisional
Probab=97.76 E-value=0.0002 Score=68.49 Aligned_cols=127 Identities=12% Similarity=0.049 Sum_probs=84.1
Q ss_pred HhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhc------cch-h--
Q 038282 71 IDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNV------PGG-L-- 137 (234)
Q Consensus 71 ~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~------~~~-l-- 137 (234)
....+++.++.|+|..+.+.+.++.. .-....+..|+ +|+|+++.++.++..++.++.+... +.. +
T Consensus 47 sv~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l 125 (591)
T PTZ00207 47 NLISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSV 125 (591)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHH
Confidence 34556777788999999888777633 33345666788 8999999999999988887777641 111 1
Q ss_pred h--hHhhhhhchhhhhHHHHHHhhCCCCCCCC----------CC---ccccc--cccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 138 N--IMGFNFGAQWPLVFAITSEFFGPKNHKEP----------ED---DLNCI--GVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 138 ~--l~G~~~G~~~~~~p~l~~~~fG~~~~~~~----------g~---g~~~d--~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
+ +.|++.|...+.....+.+.|. ++.+.. |+ +.++. -..+++..|+ .+.+.++.+++.+.+
T Consensus 126 ~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~~ 204 (591)
T PTZ00207 126 YNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIVF 204 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhh
Confidence 2 7788888777888888899995 555653 11 10111 1135667777 666666665555544
No 143
>PRK11043 putative transporter; Provisional
Probab=97.76 E-value=0.00037 Score=62.61 Aligned_cols=123 Identities=19% Similarity=0.118 Sum_probs=78.2
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTII 118 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~ 118 (234)
+.++.+|++++|...+...+..........+.+.+.++.|+++.+.+.......++..+|+++.++ +++++.....
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~ 274 (401)
T PRK11043 195 TFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWL 274 (401)
T ss_pred HHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 567899999998766555444333333455677788888999988888877778888888888887 5777765444
Q ss_pred HHHHHHHHHH---HHhh-ccc-h-h---h-hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 119 LLVSWIGHLL---IAFN-VPG-G-L---N-IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 119 ~~~~~i~~~l---l~~~-~~~-~-l---~-l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
.+..+++.+. +... .+. . . + +.|++.|..++.......+.++ ++.++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~ 331 (401)
T PRK11043 275 LVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGK 331 (401)
T ss_pred HHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChH
Confidence 4433333222 2211 111 1 1 1 6677778777777666666664 34443
No 144
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.75 E-value=0.00013 Score=68.11 Aligned_cols=133 Identities=11% Similarity=0.054 Sum_probs=78.2
Q ss_pred hHHhhHHHHHHhhCCChhhHHH------------HHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhh
Q 038282 69 LAIDNLRQIGTSLGYPKRGIST------------FVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFN 132 (234)
Q Consensus 69 ~~~~~~~~~~~~~G~s~~~aa~------------~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~ 132 (234)
.+..+.+.+.++.|++...++. ...+..++..+|.+++++ +|||+.+....+++++++.++...
T Consensus 306 ~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~ 385 (502)
T TIGR00887 306 GVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFA 385 (502)
T ss_pred ccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 3445678888888887543211 233444566778888888 799998887777766655444332
Q ss_pred c---c-c-hh--h-hHhhh-hhchhhhhHHHHHHhhCCCCCCCC-----------------CCccccccc---------c
Q 038282 133 V---P-G-GL--N-IMGFN-FGAQWPLVFAITSEFFGPKNHKEP-----------------EDDLNCIGV---------E 177 (234)
Q Consensus 133 ~---~-~-~l--~-l~G~~-~G~~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~~---------g 177 (234)
. + . .+ + +..+. ..+..++...+.+|+|+++..++. ..+.+.|.. .
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 465 (502)
T TIGR00887 386 YNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGI 465 (502)
T ss_pred HHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccc
Confidence 1 1 1 11 2 22222 222344556677999999988752 133344432 2
Q ss_pred ccHHHHH-HHHHHHHHHHHHHHHHh
Q 038282 178 CFKLSFI-MTAATLFSAFVSLILVL 201 (234)
Q Consensus 178 ~Y~~~f~-~a~~~~va~~l~l~l~~ 201 (234)
++...|+ .++++++++++.++++.
T Consensus 466 ~~~~~~~i~~~~~~~~~i~~~~lpE 490 (502)
T TIGR00887 466 WMGHVLEIFALFMFLGILFTLLIPE 490 (502)
T ss_pred cchHHHHHHHHHHHHHHHHheEecc
Confidence 4556777 87777777666544443
No 145
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.71 E-value=0.00011 Score=68.54 Aligned_cols=134 Identities=14% Similarity=0.111 Sum_probs=103.7
Q ss_pred hHHHHHHhhCCChhh-HHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-h--h--hHhh
Q 038282 73 NLRQIGTSLGYPKRG-ISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-L--N--IMGF 142 (234)
Q Consensus 73 ~~~~~~~~~G~s~~~-aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l--~--l~G~ 142 (234)
..+++.++.|+++.+ .+.+.+.+..+-.+..+..|+ +|.|+++.+..+.-++..+++.++.+.. + . ++|+
T Consensus 48 a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGv 127 (511)
T TIGR00806 48 ITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSV 127 (511)
T ss_pred HHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455677789999999 999999999999999999999 7888888887777776666665543322 2 1 9999
Q ss_pred hhhchhhhhHHHHHHhhCCCCCCCC----------C-------Cccc-cccccccHHHHH-HHHHHHHHHHHHHHHHhhh
Q 038282 143 NFGAQWPLVFAITSEFFGPKNHKEP----------E-------DDLN-CIGVECFKLSFI-MTAATLFSAFVSLILVLMT 203 (234)
Q Consensus 143 ~~G~~~~~~p~l~~~~fG~~~~~~~----------g-------~g~~-~d~~g~Y~~~f~-~a~~~~va~~l~l~l~~~~ 203 (234)
+.|+.+ ....++.+.|..++.++. | .+++ ..+-.+|....+ ..+...++.+++++++.++
T Consensus 128 aEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~ 206 (511)
T TIGR00806 128 TMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLKRPK 206 (511)
T ss_pred HHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 999999 999999999999999863 1 2221 112236888888 8888888999999998766
Q ss_pred hhhh
Q 038282 204 RKFY 207 (234)
Q Consensus 204 ~~~~ 207 (234)
|..+
T Consensus 207 ~sl~ 210 (511)
T TIGR00806 207 RSLF 210 (511)
T ss_pred hhhh
Confidence 6554
No 146
>PRK11010 ampG muropeptide transporter; Validated
Probab=97.71 E-value=0.00038 Score=65.08 Aligned_cols=152 Identities=14% Similarity=0.065 Sum_probs=98.7
Q ss_pred HHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----c-----chHHH-H
Q 038282 46 QALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----F-----RRPLM-L 115 (234)
Q Consensus 46 ~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~-----gr~~~-l 115 (234)
+..++++.+.++...+............++.+.++.|.|..+.+.+ +..+.. .+++++||. + |||+. +
T Consensus 7 ~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~l 84 (491)
T PRK11010 7 RIFQQPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQA-YVFKFLWSPLMDRYTPPFLGRRRGWL 84 (491)
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHH-HHHHHHHHHHHHcccccCCCCchHHH
Confidence 3445556555555444444444445567888889999998887775 444433 257888888 5 77774 5
Q ss_pred HHHHHHHHHHHHHHHhhcc--c-h-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---Cc
Q 038282 116 TIILLVSWIGHLLIAFNVP--G-G-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DD 170 (234)
Q Consensus 116 ~~~~~~~~i~~~ll~~~~~--~-~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g 170 (234)
....+..+++...+....+ . . ++ +.+++.+...+...++..|++..++.++. + ..
T Consensus 85 l~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~ 164 (491)
T PRK11010 85 LATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLAL 164 (491)
T ss_pred HHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666666666555444222 1 1 11 77888888888999999999998888752 1 22
Q ss_pred cccccccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 171 LNCIGVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 171 ~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
++.+...+|+.+|+ .+++.++..+..+.+
T Consensus 165 ~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~ 194 (491)
T PRK11010 165 WLADRYLGWQGMYWLMAALLIPCIIATLLA 194 (491)
T ss_pred HHHhcccCHHHHHHHHHHHHHHHHHHHHhc
Confidence 33332458999999 887777766555443
No 147
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=97.70 E-value=0.00012 Score=64.74 Aligned_cols=94 Identities=16% Similarity=0.079 Sum_probs=74.3
Q ss_pred HhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh----hHh
Q 038282 71 IDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN----IMG 141 (234)
Q Consensus 71 ~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l~G 141 (234)
...++.+.++.|.|..+.+...++..++..++.++.|+ +|||+.+....++.+++.++. ...+.. ++ +.|
T Consensus 20 ~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g 98 (355)
T TIGR00896 20 GPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIG 98 (355)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHH
Confidence 34678889999999999999999999999999999999 799999888777766666554 322222 22 778
Q ss_pred hhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 142 FNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 142 ~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
++.|...+..+.++.|.+. ++.++
T Consensus 99 ~g~~~~~~~~~~~~~~~~~-~~~~~ 122 (355)
T TIGR00896 99 VGIAIINVLLPSLIKRDFP-QRVGL 122 (355)
T ss_pred HHHHHHhccchHHHHHhCc-chhhH
Confidence 8888888888999999885 45554
No 148
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=97.70 E-value=0.00063 Score=62.14 Aligned_cols=93 Identities=15% Similarity=0.088 Sum_probs=65.7
Q ss_pred HHHHHHhh---CCChhhH---HHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccc--------
Q 038282 74 LRQIGTSL---GYPKRGI---STFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPG-------- 135 (234)
Q Consensus 74 ~~~~~~~~---G~s~~~a---a~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~-------- 135 (234)
.+.+.++. +.++.+. ..+.+...++..+|.+++|+ +|||+.+....++.+++.++.....+.
T Consensus 45 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (432)
T PRK10406 45 SLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAP 124 (432)
T ss_pred HHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHH
Confidence 34455665 3444433 23334444555588888888 899999999888888777665543221
Q ss_pred -hh--h--hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 136 -GL--N--IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 136 -~l--~--l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
.+ . +.|++.|+.++...++++|.+..++.+.
T Consensus 125 ~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~ 160 (432)
T PRK10406 125 ALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGF 160 (432)
T ss_pred HHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccH
Confidence 12 1 8899999999999999999999888775
No 149
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=97.69 E-value=0.00027 Score=71.92 Aligned_cols=123 Identities=17% Similarity=0.059 Sum_probs=85.6
Q ss_pred HHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHH-HhhCCC--hhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 45 LQALFSMDMLILFLATICGVGGTLLAIDNLRQIG-TSLGYP--KRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 45 ~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~-~~~G~s--~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
.+.++++.|+.++++.++......+....+.++. .+.+.+ ....+++.+++.+...++.+++|+ +|||+++..
T Consensus 3 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~ 82 (1146)
T PRK08633 3 KNLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRI 82 (1146)
T ss_pred cchhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHH
Confidence 3578889999888877776544443333333333 344444 344678888888999999999998 899999887
Q ss_pred HHHHHHHHHHHHHh---hccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC
Q 038282 118 ILLVSWIGHLLIAF---NVPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP 167 (234)
Q Consensus 118 ~~~~~~i~~~ll~~---~~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~ 167 (234)
+.++.++..++... ..... ++ +.|++.|...+...++++|++..++.++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 140 (1146)
T PRK08633 83 VKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRA 140 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhh
Confidence 77665544433322 12222 22 88999999999999999999999988863
No 150
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=97.68 E-value=3.6e-05 Score=66.98 Aligned_cols=123 Identities=20% Similarity=0.264 Sum_probs=85.1
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHH-HHhhCCC-hhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQI-GTSLGYP-KRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~-~~~~G~s-~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
.++..+++.+|.+++..++............+.+ .++.|.+ ..+.+...++.++...+++++.|+ +++++....
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 278 (352)
T PF07690_consen 199 FKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLI 278 (352)
T ss_dssp CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHH
Confidence 4677788888855555554443444455667776 5567999 788999999999999999999999 455555555
Q ss_pred HHHHHHHHHHHHHh-hcc--chh----h-hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 118 ILLVSWIGHLLIAF-NVP--GGL----N-IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 118 ~~~~~~i~~~ll~~-~~~--~~l----~-l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
......++.+.+.. ... ..+ . +.|++.|...+....++.+.++.++.++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 335 (352)
T PF07690_consen 279 AILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGT 335 (352)
T ss_dssp HHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 55555444444332 111 111 1 8899999999999999999988776654
No 151
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.66 E-value=2.4e-05 Score=71.89 Aligned_cols=134 Identities=7% Similarity=0.131 Sum_probs=102.7
Q ss_pred hhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccchh---h--hHhh
Q 038282 72 DNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGGL---N--IMGF 142 (234)
Q Consensus 72 ~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~l---~--l~G~ 142 (234)
.-++.+.+..++++...+.+-+++.+...+.-+++|. ++|++++.+...+-.++.+.-.+....+. . +.|+
T Consensus 54 gv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGi 133 (493)
T KOG1330|consen 54 GVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGI 133 (493)
T ss_pred hhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4455566667999999999999999999999999999 89999988877776666555444333332 2 9999
Q ss_pred hhhchhhhhHHHHHHhhCCCCCCCC----------C-------CccccccccccHHHHH-HHHHHHHHHHHHHHH-Hhhh
Q 038282 143 NFGAQWPLVFAITSEFFGPKNHKEP----------E-------DDLNCIGVECFKLSFI-MTAATLFSAFVSLIL-VLMT 203 (234)
Q Consensus 143 ~~G~~~~~~p~l~~~~fG~~~~~~~----------g-------~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l-~~~~ 203 (234)
|...+.++.|++++|.|..++.++. | +..+-+.++.|+++|. .+++.++..++.++. +.+.
T Consensus 134 GeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 134 GEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred chhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 9999999999999999999888862 2 3334445677999999 888888888777665 3334
Q ss_pred hh
Q 038282 204 RK 205 (234)
Q Consensus 204 ~~ 205 (234)
|+
T Consensus 214 rg 215 (493)
T KOG1330|consen 214 RG 215 (493)
T ss_pred cc
Confidence 43
No 152
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=97.64 E-value=0.0014 Score=60.95 Aligned_cols=76 Identities=18% Similarity=0.266 Sum_probs=61.3
Q ss_pred HHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch---------h--h--hHhhhhhchhhhhHHH
Q 038282 92 VSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG---------L--N--IMGFNFGAQWPLVFAI 154 (234)
Q Consensus 92 ~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~---------l--~--l~G~~~G~~~~~~p~l 154 (234)
.++.-++..+|.+++|+ +|||+++....++.+++.++.....+.. + . +.|++.|+.++...++
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~ 142 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIF 142 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHH
Confidence 35555777889999998 8999999999999888877766543311 2 1 8899999999999999
Q ss_pred HHHhhCCCCCCCC
Q 038282 155 TSEFFGPKNHKEP 167 (234)
Q Consensus 155 ~~~~fG~~~~~~~ 167 (234)
++|.+..++.+..
T Consensus 143 ~~e~~p~~~Rg~~ 155 (490)
T PRK10642 143 VAEYSPDRKRGFM 155 (490)
T ss_pred HHHhCCCCCCcHH
Confidence 9999998888763
No 153
>PRK10133 L-fucose transporter; Provisional
Probab=97.63 E-value=0.00053 Score=63.12 Aligned_cols=112 Identities=10% Similarity=-0.058 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHH
Q 038282 52 DMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHL 127 (234)
Q Consensus 52 ~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ 127 (234)
.++.+++.++.............|.+.++.|.|+.+.+...+...++..++.+..|+ +|||+++.....+..++.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~ 106 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAA 106 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 455555555554444444556677887788999999999999999999999999998 8999999999999888876
Q ss_pred HHHh---hccch-hh----hHhhhhhchhhhhHHHHHHhhCCCC
Q 038282 128 LIAF---NVPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKN 163 (234)
Q Consensus 128 ll~~---~~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~ 163 (234)
+... +.+.. ++ +.|++.|...+...+++.+....++
T Consensus 107 l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~ 150 (438)
T PRK10133 107 LFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS 150 (438)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh
Confidence 6431 22222 21 8899999999999999988654433
No 154
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.54 E-value=0.00018 Score=67.33 Aligned_cols=112 Identities=18% Similarity=0.166 Sum_probs=90.6
Q ss_pred hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccchhh-----hHhhhhhchhhhh
Q 038282 81 LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGGLN-----IMGFNFGAQWPLV 151 (234)
Q Consensus 81 ~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~l~-----l~G~~~G~~~~~~ 151 (234)
...+........+++.++..+|.+++|. +|||+++..++++..++.+...++.+...+ +.|++.++..++.
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~ 192 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVG 192 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHh
Confidence 4677788889999999999999999999 899999999999998877666655443332 8999999999999
Q ss_pred HHHHHHhhCCCCCCCC----------------CCccccccccccHHHHH-HHHHHHHHHHH
Q 038282 152 FAITSEFFGPKNHKEP----------------EDDLNCIGVECFKLSFI-MTAATLFSAFV 195 (234)
Q Consensus 152 p~l~~~~fG~~~~~~~----------------g~g~~~d~~g~Y~~~f~-~a~~~~va~~l 195 (234)
..+.+|++++++.+.. +.++. ..+|+..++ .+....+..++
T Consensus 193 ~~~~~E~~~~~~R~~~~~~~~~~~~~~~~~~~~~a~~---~~~Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 193 FGLVAEIVSPKQRGLALTLGGFFFVGGLMLPAGAAYI---TRDWRWLFWIISIPSGLFLLL 250 (521)
T ss_pred HhhheeecCcchhhHHHHHHHHHHHHHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999863 12232 238999998 77777666666
No 155
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.53 E-value=3.1e-05 Score=74.73 Aligned_cols=95 Identities=18% Similarity=0.233 Sum_probs=79.0
Q ss_pred hhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhc--------------
Q 038282 72 DNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNV-------------- 133 (234)
Q Consensus 72 ~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~-------------- 133 (234)
..++++.++.++++.+.+.+.|...+++.++.++.|+ .+|++++.+..++.+++.++...+.
T Consensus 54 ~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~ 133 (633)
T TIGR00805 54 SSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSS 133 (633)
T ss_pred hhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccc
Confidence 4556666778999999999999999999999999998 7899999998888888887775541
Q ss_pred -----------------------------------c-ch-h-h----hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 134 -----------------------------------P-GG-L-N----IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 134 -----------------------------------~-~~-l-~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
. .. + + +.|++.+..+++.++++.|.+..++.+.
T Consensus 134 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~ 208 (633)
T TIGR00805 134 TGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPL 208 (633)
T ss_pred cccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHH
Confidence 0 01 1 1 8899999999999999999999998875
No 156
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.50 E-value=0.00037 Score=63.63 Aligned_cols=160 Identities=13% Similarity=0.151 Sum_probs=115.1
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHH-hhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGT-SLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~-~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
|+++.-+.+....++++.++..=....++.....++. +.|++..+.....-+.++....|.+++|+ +|.|+++.+
T Consensus 244 t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~ 323 (438)
T COG2270 244 TFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMI 323 (438)
T ss_pred HHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehH
Confidence 3566666666655555555544333334555666777 68999999999999999999999999999 788887777
Q ss_pred HHHHHHHHHHHHHhhccc---hhh--hHhhhhhchhhhhHHHHHHhhCCCCCCCC-------C----------Ccccccc
Q 038282 118 ILLVSWIGHLLIAFNVPG---GLN--IMGFNFGAQWPLVFAITSEFFGPKNHKEP-------E----------DDLNCIG 175 (234)
Q Consensus 118 ~~~~~~i~~~ll~~~~~~---~l~--l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-------g----------~g~~~d~ 175 (234)
.+++..+.++...+.... +++ ++|++.|+.++..=++.++....++.++. | -+..-+.
T Consensus 324 ~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~i 403 (438)
T COG2270 324 GLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQI 403 (438)
T ss_pred HHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHH
Confidence 777766555444442222 223 99999999999999999999999999884 1 3334556
Q ss_pred ccccHHHHH-HHHHHHHHHHHHHHHHhh
Q 038282 176 VECFKLSFI-MTAATLFSAFVSLILVLM 202 (234)
Q Consensus 176 ~g~Y~~~f~-~a~~~~va~~l~l~l~~~ 202 (234)
+|+-+..++ ...+..++.++.+.++.+
T Consensus 404 Tg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 404 TGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred hcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 788888888 777777777666555433
No 157
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.50 E-value=0.0013 Score=59.35 Aligned_cols=126 Identities=16% Similarity=0.109 Sum_probs=86.3
Q ss_pred HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----c-----chHH-HHHHHHHHHHHHHHHHHhhcc-c--h
Q 038282 70 AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----F-----RRPL-MLTIILLVSWIGHLLIAFNVP-G--G 136 (234)
Q Consensus 70 ~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~-----gr~~-~l~~~~~~~~i~~~ll~~~~~-~--~ 136 (234)
...-+|.+.++.|+|.++-+.+.++... .+.+++||+ + |||+ ++....++.+++...+....+ . .
T Consensus 18 ~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~ 95 (402)
T PRK11902 18 TSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALW 95 (402)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHH
Confidence 4467888999999999999887555554 588899998 4 5655 677777777666665554322 1 1
Q ss_pred -hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---CccccccccccHHHHH-HHHHHHHHH
Q 038282 137 -LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECFKLSFI-MTAATLFSA 193 (234)
Q Consensus 137 -l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y~~~f~-~a~~~~va~ 193 (234)
++ +.+++.....+...++++|++..|+.++. + .+.+.+...+|+..|+ .+++.++..
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~ 175 (402)
T PRK11902 96 PLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGA 175 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHH
Confidence 12 55777777778889999999998878763 1 1222332358999999 777766655
Q ss_pred HHHH
Q 038282 194 FVSL 197 (234)
Q Consensus 194 ~l~l 197 (234)
+..+
T Consensus 176 l~~~ 179 (402)
T PRK11902 176 LTTL 179 (402)
T ss_pred HHHH
Confidence 5433
No 158
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=97.49 E-value=0.00082 Score=62.70 Aligned_cols=122 Identities=11% Similarity=-0.007 Sum_probs=88.6
Q ss_pred HHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHH
Q 038282 45 LQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIIL 119 (234)
Q Consensus 45 ~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~ 119 (234)
.+.+|++.|+...+..++............+.+.+. +|.|+.+++......+++..++.++.|+ +|+|+.+....
T Consensus 253 ~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~ 332 (495)
T PRK14995 253 MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGM 332 (495)
T ss_pred HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHH
Confidence 578999999887776666555544445567777776 6999999999999999999999999999 78888777777
Q ss_pred HHHHHHHHHHHhhc--c-ch-h--h--hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 120 LVSWIGHLLIAFNV--P-GG-L--N--IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 120 ~~~~i~~~ll~~~~--~-~~-l--~--l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
++.+++.+++.... + .. . + +.|++.|...+.....+.+....++.+.
T Consensus 333 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~ 387 (495)
T PRK14995 333 ALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAA 387 (495)
T ss_pred HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcch
Confidence 77766665543311 1 11 1 2 7899988888777777777666665543
No 159
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.46 E-value=0.0016 Score=60.92 Aligned_cols=173 Identities=15% Similarity=0.073 Sum_probs=105.0
Q ss_pred CCCCHHHHhccHHHHH----HHHHHHHhhhhHHh-HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cc
Q 038282 40 EDYTILQALFSMDMLI----LFLATICGVGGTLL-AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FR 110 (234)
Q Consensus 40 ~~~~~~~~lk~~~F~~----l~~~~~~~~~~~~~-~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~g 110 (234)
++.+++|+++++..-. .+...++-...|.. +..+...+.++.|++..++.++-..+++.+.+..++..+ .|
T Consensus 254 ~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~g 333 (485)
T KOG0569|consen 254 KQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLG 333 (485)
T ss_pred cCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5677899999855332 22222222233333 345666778888999999999999999999999999998 79
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhc----cc--hh-h-------hHhhhhhchh-hhhHHHHHHhhCCCCCCCC--------
Q 038282 111 RPLMLTIILLVSWIGHLLIAFNV----PG--GL-N-------IMGFNFGAQW-PLVFAITSEFFGPKNHKEP-------- 167 (234)
Q Consensus 111 r~~~l~~~~~~~~i~~~ll~~~~----~~--~l-~-------l~G~~~G~~~-~~~p~l~~~~fG~~~~~~~-------- 167 (234)
||..+..++.++.+..+++.... .. +. | ++.++++... ++..-+++|+|.++.....
T Consensus 334 RRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~ 413 (485)
T KOG0569|consen 334 RRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVN 413 (485)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHH
Confidence 99999998888877665554321 11 11 2 3344444332 3344467899998888753
Q ss_pred -------C--CccccccccccHHHHH-HHHHHHHHHHHHHH-HHhhhhhhhHHHHHHHh
Q 038282 168 -------E--DDLNCIGVECFKLSFI-MTAATLFSAFVSLI-LVLMTRKFYKSDIHQRF 215 (234)
Q Consensus 168 -------g--~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~-l~~~~~~~~~~~~~~~~ 215 (234)
+ .-.+++..|. ..|+ .++.+++..+..+. ++.++.|... ++.+..
T Consensus 414 w~~~fiv~~~fp~l~~~~g~--~~filF~i~~~~~~i~~~~~lPETkgr~~~-eI~~~~ 469 (485)
T KOG0569|consen 414 WLSNFIVGFAFPPLQNVIGP--YVFILFVIPLAIFLIYLYRYLPETKGRTPY-EIIEEL 469 (485)
T ss_pred HHHHHHHHHHHHHHHHHhcc--hhhHHHHHHHHHHHHHHHHhCcccCCCCHH-HHHHHH
Confidence 1 1122334466 4555 55555555544433 3444445544 444433
No 160
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.44 E-value=0.0003 Score=64.21 Aligned_cols=119 Identities=22% Similarity=0.217 Sum_probs=90.9
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhh-CCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSL-GYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~-G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
..++.+|||.|+.++...++..............+.+.. |.+ ...+.+..+..+...++-+++++ +|+|+.+..
T Consensus 217 ~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~ 295 (428)
T PF13347_consen 217 SLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYII 295 (428)
T ss_pred chhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhh
Confidence 467889999999888887776555544445566677764 665 45677777888889999999998 899999999
Q ss_pred HHHHHHHHHHHHHhhc--cchh-h----hHhhhhhchhhhhHHHHHHhhCCC
Q 038282 118 ILLVSWIGHLLIAFNV--PGGL-N----IMGFNFGAQWPLVFAITSEFFGPK 162 (234)
Q Consensus 118 ~~~~~~i~~~ll~~~~--~~~l-~----l~G~~~G~~~~~~p~l~~~~fG~~ 162 (234)
...+.+++.+++.... +..+ + +.|++.|..+.+..++.+|+.+.+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~ 347 (428)
T PF13347_consen 296 GLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYD 347 (428)
T ss_pred hHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhH
Confidence 8888888776665532 2222 2 889999999999999999988743
No 161
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.44 E-value=0.00069 Score=63.55 Aligned_cols=80 Identities=20% Similarity=0.243 Sum_probs=70.8
Q ss_pred hHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh----hHhhhhhchhhhhHHHHHH
Q 038282 87 GISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN----IMGFNFGAQWPLVFAITSE 157 (234)
Q Consensus 87 ~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l~G~~~G~~~~~~p~l~~~ 157 (234)
+.+++.+...+++.+|.+++|. +|||.++.++.++..++.++...+.... ++ +.|++.|+...+.|.+++|
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sE 169 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISE 169 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhh
Confidence 3489999999999999999998 8999999999999999998887765433 32 9999999999999999999
Q ss_pred hhCCCCCCC
Q 038282 158 FFGPKNHKE 166 (234)
Q Consensus 158 ~fG~~~~~~ 166 (234)
+-..+..+.
T Consensus 170 iap~~~RG~ 178 (513)
T KOG0254|consen 170 IAPAHIRGT 178 (513)
T ss_pred cCChhhhHH
Confidence 999988886
No 162
>PRK09952 shikimate transporter; Provisional
Probab=97.43 E-value=0.0034 Score=57.56 Aligned_cols=71 Identities=25% Similarity=0.299 Sum_probs=55.7
Q ss_pred Hhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch---------hh----hHhhhhhchhhhhHHHHHHhh
Q 038282 97 IWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG---------LN----IMGFNFGAQWPLVFAITSEFF 159 (234)
Q Consensus 97 i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~---------l~----l~G~~~G~~~~~~p~l~~~~f 159 (234)
++..+|.++.|+ +|||+.+....++.+++.++..+..+.. +. +.|++.|+.++....++.|.+
T Consensus 75 ~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~ 154 (438)
T PRK09952 75 LFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESA 154 (438)
T ss_pred HHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhC
Confidence 445677777887 8999999998888888777666543321 21 889999999999999999999
Q ss_pred CCCCCCCC
Q 038282 160 GPKNHKEP 167 (234)
Q Consensus 160 G~~~~~~~ 167 (234)
..|+.+..
T Consensus 155 p~~~rg~~ 162 (438)
T PRK09952 155 PKNKKAFY 162 (438)
T ss_pred CCCCCcHH
Confidence 99888753
No 163
>PRK15011 sugar efflux transporter B; Provisional
Probab=97.42 E-value=0.0019 Score=58.13 Aligned_cols=153 Identities=10% Similarity=0.045 Sum_probs=87.3
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHH-HhhCCChhhHHHHHHHHHH-hcccccccccc---cchHHHH-HH
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQIG-TSLGYPKRGISTFVSLVNI-WNCLGRVVSGF---FRRPLML-TI 117 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~-~~~G~s~~~aa~~~si~~i-~~~vGRl~~G~---~gr~~~l-~~ 117 (234)
..+.+ |.+.|.+++..++.......+...++.+. ++.|.|+.+.+.+.+...+ ....+.+..|+ +|||+.+ ..
T Consensus 9 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~ 87 (393)
T PRK15011 9 SAKSF-DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVF 87 (393)
T ss_pred cchhc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHH
Confidence 34455 55577777777776655555556666654 5679999999988776654 55566666676 6777654 44
Q ss_pred HHHHHHHHHHHHHhhccchh-h----hHhhhhhchhhhhHHHHHHhhCCCCCCC-----C-----------C---Ccccc
Q 038282 118 ILLVSWIGHLLIAFNVPGGL-N----IMGFNFGAQWPLVFAITSEFFGPKNHKE-----P-----------E---DDLNC 173 (234)
Q Consensus 118 ~~~~~~i~~~ll~~~~~~~l-~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~-----~-----------g---~g~~~ 173 (234)
..+...++..+.....+... + +.+...+...+....++.+....+.... . + ++.+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~ 167 (393)
T PRK15011 88 CCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALA 167 (393)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 44444455444444332222 1 3333333444555556666554443211 0 1 33333
Q ss_pred ccccccHHHHH-HHHHHHHHHHHHHH
Q 038282 174 IGVECFKLSFI-MTAATLFSAFVSLI 198 (234)
Q Consensus 174 d~~g~Y~~~f~-~a~~~~va~~l~l~ 198 (234)
+ .-+|+.+|+ .+...++.+++.+.
T Consensus 168 ~-~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 168 M-GFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred H-hcChHHHHHHHHHHHHHHHHHHHh
Confidence 3 348999999 77766666555443
No 164
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=97.41 E-value=0.0013 Score=58.01 Aligned_cols=128 Identities=14% Similarity=0.036 Sum_probs=80.6
Q ss_pred HHhhHHHHH-HhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH-HHHHHHHHHHHHHhhccch-hh----
Q 038282 70 AIDNLRQIG-TSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI-ILLVSWIGHLLIAFNVPGG-LN---- 138 (234)
Q Consensus 70 ~~~~~~~~~-~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~-~~~~~~i~~~ll~~~~~~~-l~---- 138 (234)
....++.+. ++.|.|+.+.+.+.+...+...+..+++|+ +|||+.+.. ...+..++.++...+.+.. ++
T Consensus 16 ~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (375)
T TIGR00899 16 QFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGV 95 (375)
T ss_pred HhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 445566655 567999999999999999999999999998 687776544 4444444444444433322 22
Q ss_pred hHhhhhhchhhhhHHHHHHhhCCCCCCC------------C----C---CccccccccccHHHHH-HHHHHHHHHHHHHH
Q 038282 139 IMGFNFGAQWPLVFAITSEFFGPKNHKE------------P----E---DDLNCIGVECFKLSFI-MTAATLFSAFVSLI 198 (234)
Q Consensus 139 l~G~~~G~~~~~~p~l~~~~fG~~~~~~------------~----g---~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~ 198 (234)
+.|.+.+...+....+..|....+..+. . + .+... ...+|+..|+ .+.+.++..++.+.
T Consensus 96 ~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~-~~~~~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 96 LLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLA-LGFGFTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHH-HhcccHHHHHHHHHHHHHHHHHHHH
Confidence 4555555566666666777775444331 0 1 22222 2357999999 77776666655544
No 165
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.41 E-value=0.00015 Score=67.67 Aligned_cols=121 Identities=17% Similarity=0.186 Sum_probs=101.5
Q ss_pred hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhcc--ch-h-h---hHhhhhhchhh
Q 038282 81 LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVP--GG-L-N---IMGFNFGAQWP 149 (234)
Q Consensus 81 ~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~--~~-l-~---l~G~~~G~~~~ 149 (234)
..++..+-+.+.|-...+..++.+..|+ +|-|+++..+.++.+++.++.+.+.. .. + . +.|++.|..++
T Consensus 68 ~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~p 147 (466)
T KOG2532|consen 68 YDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFP 147 (466)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHh
Confidence 4677888999999999999999999999 89999999988888888888877543 11 2 2 99999999999
Q ss_pred hhHHHHHHhhCCCCCCCC-----------------CCccccccccccHHHHH-HHHHHHHHHHHHHHHHh
Q 038282 150 LVFAITSEFFGPKNHKEP-----------------EDDLNCIGVECFKLSFI-MTAATLFSAFVSLILVL 201 (234)
Q Consensus 150 ~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l~~ 201 (234)
.+..++++....+..++. .+|++|+...+|+.+|| .+++.++-.++.+.+..
T Consensus 148 a~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 148 AIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred hhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999998888762 37888998899999999 88888887777666543
No 166
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.40 E-value=0.0023 Score=58.50 Aligned_cols=98 Identities=20% Similarity=0.229 Sum_probs=71.0
Q ss_pred HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc-----cchHHHHHHHHHHHHHHHHHHHhhccch-hh----h
Q 038282 70 AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF-----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN----I 139 (234)
Q Consensus 70 ~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~-----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l 139 (234)
....++.+.++.|+|..|.+.+.++..+...++.++||+ ..+++.+.+..++.++.++......+.. ++ +
T Consensus 21 ~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l 100 (400)
T PF03825_consen 21 FLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLL 100 (400)
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 445688899999999999999999999999999999999 2345555555555555444433333322 21 7
Q ss_pred HhhhhhchhhhhHHHHHHhhC--CCCCCCC
Q 038282 140 MGFNFGAQWPLVFAITSEFFG--PKNHKEP 167 (234)
Q Consensus 140 ~G~~~G~~~~~~p~l~~~~fG--~~~~~~~ 167 (234)
+.+.+.+..++.-+++.+.-+ .+++|++
T Consensus 101 ~~~~~~p~~pl~dsi~~~~~~~~~~~YG~i 130 (400)
T PF03825_consen 101 FSFFFSPTMPLSDSIALSYLGDRGKDYGRI 130 (400)
T ss_pred HHHHHccHHHHHHHHHHHHcccccCCCCcc
Confidence 788888888888888888776 3555654
No 167
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.40 E-value=0.0022 Score=59.67 Aligned_cols=154 Identities=14% Similarity=0.161 Sum_probs=109.4
Q ss_pred HhccH-HHHHHHHHHHHhhhhHHhHHhhHHHHHH-----hhCCChhhHHHHHHHHHHhcccccccccc-----cchHHHH
Q 038282 47 ALFSM-DMLILFLATICGVGGTLLAIDNLRQIGT-----SLGYPKRGISTFVSLVNIWNCLGRVVSGF-----FRRPLML 115 (234)
Q Consensus 47 ~lk~~-~F~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~G~s~~~aa~~~si~~i~~~vGRl~~G~-----~gr~~~l 115 (234)
.+++| .+|.++..-+.--++.+++-..+..+.. .+|+++++|..+++.++-.--+..++.|| .|+++++
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI 95 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI 95 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 44443 4666666655555555554333333332 24699999999999999888888888999 7999999
Q ss_pred HHHHHHHHHHHHHHHhhc-c--chhh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC------------C-------C
Q 038282 116 TIILLVSWIGHLLIAFNV-P--GGLN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP------------E-------D 169 (234)
Q Consensus 116 ~~~~~~~~i~~~ll~~~~-~--~~l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~------------g-------~ 169 (234)
.+..+++.+|.+++..+. . ..+| +++++.|..-+...++++|.|+.++--+= | -
T Consensus 96 ~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~ 175 (498)
T COG3104 96 VLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIIT 175 (498)
T ss_pred HHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHH
Confidence 999999999999988753 2 2344 78899999999999999999987766541 1 1
Q ss_pred ccccccccccHHHHH-HHHHHHHHHHHHHHHHh
Q 038282 170 DLNCIGVECFKLSFI-MTAATLFSAFVSLILVL 201 (234)
Q Consensus 170 g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l~~ 201 (234)
++. ....+|...|- ++.-...+.+..+..++
T Consensus 176 ~~~-~~~~g~~~gF~~aavGm~~gl~~f~~~~r 207 (498)
T COG3104 176 GLL-AINYGWHVGFGLAAVGMIIGLVIFLLGRR 207 (498)
T ss_pred HHH-HHhhCHHHHHHHHHHHHHHHHHHHHHccc
Confidence 111 13456999998 77666667666666554
No 168
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=97.40 E-value=0.0011 Score=62.67 Aligned_cols=122 Identities=18% Similarity=0.136 Sum_probs=85.4
Q ss_pred HHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHH
Q 038282 45 LQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILL 120 (234)
Q Consensus 45 ~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~ 120 (234)
...+|+|.|..+|++-+++..+..+...-.+-+..+..-|+...+.+.....+-..+-.++.|. ++||++++...+
T Consensus 4 ~aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~ 83 (524)
T PF05977_consen 4 FAPLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQL 83 (524)
T ss_pred cccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHH
Confidence 3468999999999998887666554333444455566666666666666666666666666776 899999998888
Q ss_pred HHHHHHHHHHh-h-c---cch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 121 VSWIGHLLIAF-N-V---PGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 121 ~~~i~~~ll~~-~-~---~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
++++..+++.. . . +.+ ++ +.|++.....+...++++++.+.++..+
T Consensus 84 ~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~ 139 (524)
T PF05977_consen 84 LRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPA 139 (524)
T ss_pred HHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHH
Confidence 87654433322 1 1 112 22 7788888888999999999999999875
No 169
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.36 E-value=0.002 Score=56.51 Aligned_cols=131 Identities=12% Similarity=0.083 Sum_probs=81.6
Q ss_pred cHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhh-CCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH-HHHHHH
Q 038282 50 SMDMLILFLATICGVGGTLLAIDNLRQIGTSL-GYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI-ILLVSW 123 (234)
Q Consensus 50 ~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~-G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~-~~~~~~ 123 (234)
.|.||++.+..++.-..-.=++...+.+-+++ |+|+..++.+.|..-..+.+-.+++|. .|++.+... .++...
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl 342 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTL 342 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHH
Confidence 35799877765554433322333444555664 999999999999999889999999998 677655443 444445
Q ss_pred HHHHHHHhhc-cchh-h-hHhhhhhc----hhhhhHHHHHHhhCCCCCCCC-----------------CCcccccccccc
Q 038282 124 IGHLLIAFNV-PGGL-N-IMGFNFGA----QWPLVFAITSEFFGPKNHKEP-----------------EDDLNCIGVECF 179 (234)
Q Consensus 124 i~~~ll~~~~-~~~l-~-l~G~~~G~----~~~~~p~l~~~~fG~~~~~~~-----------------g~g~~~d~~g~Y 179 (234)
++...+.+.. ++.. . +.|+.+.. .++++|.+++ .++.|+. .+|.+.|+.|+|
T Consensus 343 ~~H~~l~Ft~lsPy~~m~~lGLsysllAcslWP~va~~vp----E~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y 418 (459)
T KOG4686|consen 343 LGHSGLFFTFLSPYTSMTFLGLSYSLLACSLWPCVASLVP----EEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSY 418 (459)
T ss_pred HHhhhHHhhhccHHHHHHHHhhhHHHHHHHHhhhhhhhCC----HHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCch
Confidence 5555554421 1111 1 55665554 4455555544 4455541 488889999988
Q ss_pred HHHHH
Q 038282 180 KLSFI 184 (234)
Q Consensus 180 ~~~f~ 184 (234)
+..-.
T Consensus 419 ~~le~ 423 (459)
T KOG4686|consen 419 DNLEA 423 (459)
T ss_pred hhHHH
Confidence 76544
No 170
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=97.36 E-value=0.00019 Score=67.80 Aligned_cols=155 Identities=14% Similarity=0.022 Sum_probs=95.9
Q ss_pred HhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHH
Q 038282 47 ALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLV 121 (234)
Q Consensus 47 ~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~ 121 (234)
+.++|....+.+..++.......+...+|.++++ .|.++...+.+.+..+++.++|-++.++ +++.+.+..+.+.
T Consensus 214 v~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~ 293 (524)
T PF05977_consen 214 VRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLL 293 (524)
T ss_pred HhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHH
Confidence 3445655443333333222222233446667765 5899999999999999999999999997 5666777777777
Q ss_pred HHHHHHHHHhhccchh----h-hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---Ccccccccccc
Q 038282 122 SWIGHLLIAFNVPGGL----N-IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVECF 179 (234)
Q Consensus 122 ~~i~~~ll~~~~~~~l----~-l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g~Y 179 (234)
.+++++.+.+..+.++ . +.|++.....+...+.+-+....+..|+. | .|.+.|.. +-
T Consensus 294 ~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~-g~ 372 (524)
T PF05977_consen 294 FALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHF-GV 372 (524)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CH
Confidence 7766666555333222 1 77888877777777777777777777763 1 33333332 34
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHhh
Q 038282 180 KLSFI-MTAATLFSAFVSLILVLM 202 (234)
Q Consensus 180 ~~~f~-~a~~~~va~~l~l~l~~~ 202 (234)
..++. +++..+++.++....+.+
T Consensus 373 ~~al~~a~~~lll~~~~~~~~~l~ 396 (524)
T PF05977_consen 373 RTALLIAGAALLLSALIALRFPLR 396 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCc
Confidence 45566 555555555554444333
No 171
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=97.29 E-value=0.0022 Score=65.61 Aligned_cols=154 Identities=14% Similarity=0.149 Sum_probs=92.9
Q ss_pred HHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHH-----HhhCCC-hhhHHHHHHHHHHhcccccccccc----cchHHH
Q 038282 45 LQALFSMDMLILFLATICGVGGTLLAIDNLRQIG-----TSLGYP-KRGISTFVSLVNIWNCLGRVVSGF----FRRPLM 114 (234)
Q Consensus 45 ~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~G~s-~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~ 114 (234)
.+++|+++|+.+++..+++...-.+....+..+. .+.+.+ ....+...++..+...+..+++|+ +|||++
T Consensus 5 ~~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~ 84 (1140)
T PRK06814 5 LYLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKL 84 (1140)
T ss_pred hhhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHH
Confidence 3578899999888877776654322222222221 122222 234566777788888899999998 899987
Q ss_pred HHHHHHHHH--HHHHHHHhh-ccch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---C
Q 038282 115 LTIILLVSW--IGHLLIAFN-VPGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---D 169 (234)
Q Consensus 115 l~~~~~~~~--i~~~ll~~~-~~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~ 169 (234)
+........ .+..++... .+.. ++ +.|++.+...+..-+++.+++..++.++. | +
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~ 164 (1140)
T PRK06814 85 AKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIG 164 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHH
Confidence 643222211 111111111 2222 22 88999999999999999999999988863 1 4
Q ss_pred ccccccccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 170 DLNCIGVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 170 g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
|++.+ ..+++..|+ .+.+.+++.++.+.+
T Consensus 165 g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1140)
T PRK06814 165 GLATI-SGNFVILVALLMGIAVLGWLASLFI 194 (1140)
T ss_pred HHHHh-ccccHHHHHHHHHHHHHHHHHHhhC
Confidence 44433 356777776 555555555444444
No 172
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.29 E-value=0.0014 Score=59.40 Aligned_cols=87 Identities=17% Similarity=0.074 Sum_probs=67.5
Q ss_pred HhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccchhh-----hHhhhhhchhh
Q 038282 79 TSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGGLN-----IMGFNFGAQWP 149 (234)
Q Consensus 79 ~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~l~-----l~G~~~G~~~~ 149 (234)
++.+.+...++.+-|.+++.+.+..+.||. +|||.++.+++...++.++++........+ +.|+.- +..+
T Consensus 61 ~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~k-gnl~ 139 (451)
T KOG2615|consen 61 EPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFK-GNLS 139 (451)
T ss_pred CcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-CchH
Confidence 334556678899999999999999999998 899999999888888877777665444222 444444 4567
Q ss_pred hhHHHHHHhhCCCCCCC
Q 038282 150 LVFAITSEFFGPKNHKE 166 (234)
Q Consensus 150 ~~p~l~~~~fG~~~~~~ 166 (234)
++-++++|++-.|+.+.
T Consensus 140 v~rAiisdV~sek~r~l 156 (451)
T KOG2615|consen 140 VIRAIISDVVSEKYRPL 156 (451)
T ss_pred HHHHHHHhhcChhhccc
Confidence 77889999999988876
No 173
>PRK09669 putative symporter YagG; Provisional
Probab=97.28 E-value=0.0045 Score=56.74 Aligned_cols=118 Identities=13% Similarity=0.042 Sum_probs=71.2
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTII 118 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~ 118 (234)
+.++.+||+.||.+++..++..............+.+..--+++..+.+.....+...++.+++++ +|+|+.+...
T Consensus 221 ~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~ 300 (444)
T PRK09669 221 DLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWT 300 (444)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHH
Confidence 457789999999887766554333222112222223322112333444555555777788888888 7888887776
Q ss_pred HHHHHHHHH-HHHhhcc-chh-h----hHhhhhhchhhhhHHHHHHhhC
Q 038282 119 LLVSWIGHL-LIAFNVP-GGL-N----IMGFNFGAQWPLVFAITSEFFG 160 (234)
Q Consensus 119 ~~~~~i~~~-ll~~~~~-~~l-~----l~G~~~G~~~~~~p~l~~~~fG 160 (234)
.+..+++.+ +...+.+ ..+ + +.|++.+...++..++++|...
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d 349 (444)
T PRK09669 301 IVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVD 349 (444)
T ss_pred HHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 655544332 2222222 222 2 7899999999999999999874
No 174
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.26 E-value=0.00022 Score=53.13 Aligned_cols=105 Identities=13% Similarity=0.184 Sum_probs=73.7
Q ss_pred HHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccchh----h-hHhhhhhchhhhhHHHHHHhhCCCCC
Q 038282 94 LVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGGL----N-IMGFNFGAQWPLVFAITSEFFGPKNH 164 (234)
Q Consensus 94 i~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~l----~-l~G~~~G~~~~~~p~l~~~~fG~~~~ 164 (234)
..++++.++.+++|+ +|||+.+.....+..++.+++....+... . +.|++.+...+....++.|.+..++.
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 85 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEER 85 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhh
Confidence 445667778888887 78899888877777777665554333221 1 88999999999999999999998887
Q ss_pred CCC-----------------CCccccccccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 165 KEP-----------------EDDLNCIGVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 165 ~~~-----------------g~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
++. ..+... ...+|+..|+ .+...+++.++...+
T Consensus 86 ~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 86 GVALGLMSAGIALGPLLGPPLGGVLA-QFLGWRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred hHHHHHHHHhHHHHHHHhHHhHHHHh-cccchHHHHHHHHHHHHHHHHHHhhc
Confidence 753 133333 3356888888 777766666655443
No 175
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.23 E-value=2.5e-05 Score=71.29 Aligned_cols=82 Identities=28% Similarity=0.313 Sum_probs=69.5
Q ss_pred hhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhc---cchhh-----hHhhhhhchhhhhHH
Q 038282 86 RGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNV---PGGLN-----IMGFNFGAQWPLVFA 153 (234)
Q Consensus 86 ~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~---~~~l~-----l~G~~~G~~~~~~p~ 153 (234)
.+.+...+...++..+|.+++|+ +|||+.+.++.++..++.++...+. +...+ +.|++.|+..+..+.
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 45678889999999999999998 8999999999989888887776654 33221 999999999999999
Q ss_pred HHHHhhCCCCCCCC
Q 038282 154 ITSEFFGPKNHKEP 167 (234)
Q Consensus 154 l~~~~fG~~~~~~~ 167 (234)
++.|+-..++.+..
T Consensus 126 ~~~E~~~~~~R~~~ 139 (451)
T PF00083_consen 126 YISEIAPPKHRGFL 139 (451)
T ss_pred cccccccccccccc
Confidence 99999999988763
No 176
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.17 E-value=0.0037 Score=56.07 Aligned_cols=106 Identities=14% Similarity=0.037 Sum_probs=65.0
Q ss_pred HHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHH-HHHHHHHH
Q 038282 53 MLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIIL-LVSWIGHL 127 (234)
Q Consensus 53 F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~-~~~~i~~~ 127 (234)
+|.+.+.+++.....-.....++.+.++.|.|..+.+.+.++..+...++.+++|. .+|+....... ....+..+
T Consensus 6 ~~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~ 85 (382)
T TIGR00902 6 FRWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA 85 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 34455555554444334567789999999999999999999999999999999997 45433222111 11111111
Q ss_pred HHH-hhccch-hh----hHhhhhhchhhhhHHHHHHh
Q 038282 128 LIA-FNVPGG-LN----IMGFNFGAQWPLVFAITSEF 158 (234)
Q Consensus 128 ll~-~~~~~~-l~----l~G~~~G~~~~~~p~l~~~~ 158 (234)
.+. ...+.. ++ +.+.+.+...+..-+++.+.
T Consensus 86 ~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~ 122 (382)
T TIGR00902 86 AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW 122 (382)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH
Confidence 111 222222 22 56777777777777776554
No 177
>TIGR00901 2A0125 AmpG-related permease.
Probab=97.17 E-value=0.0024 Score=56.27 Aligned_cols=126 Identities=16% Similarity=0.066 Sum_probs=79.9
Q ss_pred HhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----c-----chHHH-HHHHHHHHHHHHHHHHhhcc-ch---
Q 038282 71 IDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----F-----RRPLM-LTIILLVSWIGHLLIAFNVP-GG--- 136 (234)
Q Consensus 71 ~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~-----gr~~~-l~~~~~~~~i~~~ll~~~~~-~~--- 136 (234)
..-.+.+.++.|+|..+.+....+ ++...+ ++++|. + |||+. +....++.+++.+.+.+..+ ..
T Consensus 8 ~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~ 85 (356)
T TIGR00901 8 GNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPL 85 (356)
T ss_pred HhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHH
Confidence 346778889999999988877544 444444 888887 3 77776 45555556555444444322 11
Q ss_pred hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC--------------C---Ccccccccc-------ccHHHHH-HHH
Q 038282 137 LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP--------------E---DDLNCIGVE-------CFKLSFI-MTA 187 (234)
Q Consensus 137 l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~--------------g---~g~~~d~~g-------~Y~~~f~-~a~ 187 (234)
++ +.+++.+...+...++++|.+..|+.+.. + .+......+ +|+.+|+ .+.
T Consensus 86 l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai 165 (356)
T TIGR00901 86 LAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTAL 165 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHH
Confidence 11 55666777777788899999988888753 1 222222222 3999999 777
Q ss_pred HHHHHHHHHHH
Q 038282 188 ATLFSAFVSLI 198 (234)
Q Consensus 188 ~~~va~~l~l~ 198 (234)
+.+++.++.+.
T Consensus 166 ~~l~~~~~~~~ 176 (356)
T TIGR00901 166 LILPGLLVTLF 176 (356)
T ss_pred HHHHHHHHHHH
Confidence 76665555443
No 178
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.15 E-value=0.0041 Score=55.74 Aligned_cols=123 Identities=11% Similarity=0.010 Sum_probs=72.3
Q ss_pred HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHH-HHHHHHHHHHHHHHHhh-ccchh-h----
Q 038282 70 AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLML-TIILLVSWIGHLLIAFN-VPGGL-N---- 138 (234)
Q Consensus 70 ~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l-~~~~~~~~i~~~ll~~~-~~~~l-~---- 138 (234)
+...++.+.++.|.|..+.+.++++..+...++.+++|. +||+... ....+...+..+.+... .+.+. +
T Consensus 23 ~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 102 (382)
T PRK11128 23 FLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAFWFGAHSFWLLFVAIG 102 (382)
T ss_pred HhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 556788899999999999999999999999999999998 4542111 11111111111111111 22222 2
Q ss_pred hHhhhhhchhhhhHHHHHHhhCCCCCC--CC----------C---CccccccccccHHHHH-HHHHHHHHH
Q 038282 139 IMGFNFGAQWPLVFAITSEFFGPKNHK--EP----------E---DDLNCIGVECFKLSFI-MTAATLFSA 193 (234)
Q Consensus 139 l~G~~~G~~~~~~p~l~~~~fG~~~~~--~~----------g---~g~~~d~~g~Y~~~f~-~a~~~~va~ 193 (234)
+.|++.+...+...+++.+....+... .. | ++++.+ ..+|+..|+ .++..++..
T Consensus 103 l~g~~~~~~~~~~~a~~~~~~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~-~~g~~~~f~~~~~~~~~~~ 172 (382)
T PRK11128 103 LFNLFFSPLVPLTDALANTWQKQIGLDYGKVRLWGSIAFVIGSALTGKLVS-WFGEQAILWILTAGVASML 172 (382)
T ss_pred HHHHHHcccccHHHHHHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHH-HcChhHHHHHHHHHHHHHH
Confidence 577778888887777777663322211 11 1 333333 236888888 665444443
No 179
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.15 E-value=0.0014 Score=61.12 Aligned_cols=168 Identities=15% Similarity=0.131 Sum_probs=105.8
Q ss_pred CCCCHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----c-----
Q 038282 40 EDYTILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----F----- 109 (234)
Q Consensus 40 ~~~~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~----- 109 (234)
.+.+.++.++++.+|.+++.-++.......+..++|.+..+ +|++-.+.+.+.++--+...+-++++|. .
T Consensus 247 ~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~l 326 (466)
T KOG2532|consen 247 PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRIL 326 (466)
T ss_pred CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 36788999999999999999998887777778899999987 6999999999999999999999999998 1
Q ss_pred ----chHHHHHHHHHHHHHHHHHHHhhc-cch---h--h-----hHhhhhhchhhhhHH----HHHHhhCCCCCCC-C--
Q 038282 110 ----RRPLMLTIILLVSWIGHLLIAFNV-PGG---L--N-----IMGFNFGAQWPLVFA----ITSEFFGPKNHKE-P-- 167 (234)
Q Consensus 110 ----gr~~~l~~~~~~~~i~~~ll~~~~-~~~---l--~-----l~G~~~G~~~~~~p~----l~~~~fG~~~~~~-~-- 167 (234)
-||..-.+++...+++++.+.+.. ... + + +.|+..++......- ...-+.|..+.-. +
T Consensus 327 s~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~ 406 (466)
T KOG2532|consen 327 SETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAG 406 (466)
T ss_pred chHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHH
Confidence 122222344444555555544422 111 1 1 334444443322211 1111122111111 0
Q ss_pred -----CCcccc-c-cccccHHHHH-HHHHHHHHHHHHHHHHhhhhhhh
Q 038282 168 -----EDDLNC-I-GVECFKLSFI-MTAATLFSAFVSLILVLMTRKFY 207 (234)
Q Consensus 168 -----g~g~~~-d-~~g~Y~~~f~-~a~~~~va~~l~l~l~~~~~~~~ 207 (234)
..+.+. | ....|+..|+ .+++.+++.++..+.-.-++..|
T Consensus 407 ~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e~~~w 454 (466)
T KOG2532|consen 407 FIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGSGEPAPW 454 (466)
T ss_pred HHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEeecCcccCc
Confidence 244444 3 2458999999 88888888866555433344444
No 180
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.06 E-value=0.0079 Score=54.78 Aligned_cols=66 Identities=6% Similarity=-0.205 Sum_probs=45.1
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhh-CCChhhHHHHHHHHHHhcccccccccc
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSL-GYPKRGISTFVSLVNIWNCLGRVVSGF 108 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~-G~s~~~aa~~~si~~i~~~vGRl~~G~ 108 (234)
..++.+|||.+|...+..++............|.+.++. |.++.+.+........+..++..+.+.
T Consensus 210 ~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~ 276 (413)
T PRK15403 210 DFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVAR 276 (413)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356789999999877776655444444445667787775 899988887765555555665555554
No 181
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.05 E-value=0.0027 Score=59.40 Aligned_cols=80 Identities=25% Similarity=0.261 Sum_probs=63.4
Q ss_pred HHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhc--c-chh--h---hHhhhhhchhhhhHHHH
Q 038282 88 ISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNV--P-GGL--N---IMGFNFGAQWPLVFAIT 155 (234)
Q Consensus 88 aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~--~-~~l--~---l~G~~~G~~~~~~p~l~ 155 (234)
-+..+|++.++..+|-++.|+ +|||+.+.+..++..++.++..... + ..+ + +.|+..|......|-++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 356777778899999999998 8999999888877776665554422 2 122 2 99999999999999999
Q ss_pred HHhhCCCCCCCC
Q 038282 156 SEFFGPKNHKEP 167 (234)
Q Consensus 156 ~~~fG~~~~~~~ 167 (234)
.|.-..+..|..
T Consensus 142 ~E~sP~~~RG~~ 153 (485)
T KOG0569|consen 142 TEISPKNLRGAL 153 (485)
T ss_pred hhcChhhhccHH
Confidence 999999999863
No 182
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.00 E-value=0.0069 Score=56.38 Aligned_cols=115 Identities=21% Similarity=0.186 Sum_probs=80.3
Q ss_pred HHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHH
Q 038282 46 QALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILL 120 (234)
Q Consensus 46 ~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~ 120 (234)
..+||+.+-.+.++.++..............+.+. +|.++.+..............+-+++.. +|+|+.+....+
T Consensus 231 ~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~ 310 (467)
T COG2211 231 LIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLL 310 (467)
T ss_pred HHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHH
Confidence 57789888877775555443333333344555554 5887777767766666666666777776 899999999998
Q ss_pred HHHHHHHHHHhhccc--hh-h----hHhhhhhchhhhhHHHHHHhhC
Q 038282 121 VSWIGHLLIAFNVPG--GL-N----IMGFNFGAQWPLVFAITSEFFG 160 (234)
Q Consensus 121 ~~~i~~~ll~~~~~~--~l-~----l~G~~~G~~~~~~p~l~~~~fG 160 (234)
+.+++.+++.+.... .+ + +.+++.+...++..++++|+-.
T Consensus 311 ~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vD 357 (467)
T COG2211 311 LLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVD 357 (467)
T ss_pred HHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhh
Confidence 888888777663222 22 2 7789999999999999887754
No 183
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=96.99 E-value=0.006 Score=57.13 Aligned_cols=129 Identities=14% Similarity=0.114 Sum_probs=87.9
Q ss_pred HhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc--------cchHHHHHHH-HHHHHHHHHHHHhhccc------
Q 038282 71 IDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF--------FRRPLMLTII-LLVSWIGHLLIAFNVPG------ 135 (234)
Q Consensus 71 ~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~--------~gr~~~l~~~-~~~~~i~~~ll~~~~~~------ 135 (234)
..+++++.++.|.+....+.++.+..+...+..+++|+ +|||+.+.+. .....++++++.++.+.
T Consensus 24 ~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~ 103 (477)
T TIGR01301 24 LSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGD 103 (477)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccc
Confidence 46788899999999999999999999999999999998 6888877664 44444555555442110
Q ss_pred -------h---h-h-----hHhhhhhchhhhhHHHHHHhhCCCCCCC--C--------------C---Cccc--cc----
Q 038282 136 -------G---L-N-----IMGFNFGAQWPLVFAITSEFFGPKNHKE--P--------------E---DDLN--CI---- 174 (234)
Q Consensus 136 -------~---l-~-----l~G~~~G~~~~~~p~l~~~~fG~~~~~~--~--------------g---~g~~--~d---- 174 (234)
. + + +..++.....+...++++|++..++..+ . | ++.. ++
T Consensus 104 ~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~ 183 (477)
T TIGR01301 104 NLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPF 183 (477)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccc
Confidence 0 1 1 3344777777778889999999775421 0 1 2111 11
Q ss_pred --------cccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 175 --------GVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 175 --------~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
...+++.+|+ .+++.+++.++..+.
T Consensus 184 ~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~ 217 (477)
T TIGR01301 184 TKTEACGVSCANLKSCFLIDIILLAILTYIALSA 217 (477)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHHHHeee
Confidence 1137899999 777777766666554
No 184
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=96.96 E-value=0.0034 Score=58.13 Aligned_cols=84 Identities=21% Similarity=0.341 Sum_probs=68.4
Q ss_pred CChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhh--ccch------h--h--hHhhhhhc
Q 038282 83 YPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFN--VPGG------L--N--IMGFNFGA 146 (234)
Q Consensus 83 ~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~--~~~~------l--~--l~G~~~G~ 146 (234)
+++...+.+-.+..+++++|++++|| +|||+++-..+++++++-.+...+ .+.. + | +.|++.|+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGG 160 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGG 160 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccC
Confidence 55667777777888999999999999 899999999988888877644432 1211 2 2 99999999
Q ss_pred hhhhhHHHHHHhhCCCCCCC
Q 038282 147 QWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 147 ~~~~~p~l~~~~fG~~~~~~ 166 (234)
-+|+..+.++|.--.+..|.
T Consensus 161 DYPlSAtI~SE~an~~~RGa 180 (538)
T KOG0252|consen 161 DYPLSATIMSESANKKTRGA 180 (538)
T ss_pred CCcchHHHhhhhhhhccccc
Confidence 99999999999998888886
No 185
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=96.94 E-value=0.0087 Score=54.09 Aligned_cols=117 Identities=14% Similarity=-0.112 Sum_probs=71.1
Q ss_pred HHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHH
Q 038282 45 LQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIIL 119 (234)
Q Consensus 45 ~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~ 119 (234)
++++++|.++......++............+.+.++ .|.++.+.+.+.+..+++..+|.++.|+ .++++.+...+
T Consensus 199 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~ 278 (393)
T PRK11195 199 RVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI 278 (393)
T ss_pred HHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH
Confidence 466788887755444333333333333445566655 6999999999999999999999999998 34444444443
Q ss_pred HHHHHHHHHHHhhccchh----h-hHhhhhhchhhhhHHHHHHhhCCCC
Q 038282 120 LVSWIGHLLIAFNVPGGL----N-IMGFNFGAQWPLVFAITSEFFGPKN 163 (234)
Q Consensus 120 ~~~~i~~~ll~~~~~~~l----~-l~G~~~G~~~~~~p~l~~~~fG~~~ 163 (234)
. .++..+++....+... . +.|++.|...+...+.+.+. .+++
T Consensus 279 ~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~-~~~~ 325 (393)
T PRK11195 279 L-MGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHR-GHVL 325 (393)
T ss_pred H-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhh-Cccc
Confidence 2 2333222222222221 1 67888887776666776665 4443
No 186
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=96.91 E-value=0.013 Score=53.58 Aligned_cols=84 Identities=12% Similarity=0.087 Sum_probs=55.8
Q ss_pred hhHHHH-HHhhCCChhhHHHHHHHHHHhcccccccccc----cch-HHHHHHHHHHHHHHHHHHHhhccch-hh----hH
Q 038282 72 DNLRQI-GTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRR-PLMLTIILLVSWIGHLLIAFNVPGG-LN----IM 140 (234)
Q Consensus 72 ~~~~~~-~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr-~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l~ 140 (234)
..++.+ .++.|+|..+.+.+.++..++..++.+++|. +|| |+.+.+..++..++..+.....+.. ++ +.
T Consensus 23 ~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 102 (418)
T TIGR00889 23 VTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLAN 102 (418)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 334444 4557999999999999999999999999999 544 6566665655555544444332222 22 66
Q ss_pred hhhhhchhhhhHHHH
Q 038282 141 GFNFGAQWPLVFAIT 155 (234)
Q Consensus 141 G~~~G~~~~~~p~l~ 155 (234)
|++.+...+..-++.
T Consensus 103 ~~~~~~~~~~~~~l~ 117 (418)
T TIGR00889 103 SLAYMPTIALTNSIS 117 (418)
T ss_pred HHHHccHHHHHHHHH
Confidence 777666666555443
No 187
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=96.75 E-value=0.012 Score=51.54 Aligned_cols=70 Identities=31% Similarity=0.394 Sum_probs=54.3
Q ss_pred Hhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccc---------hhh----hHhhhhhchhhhhHHHHHHhh
Q 038282 97 IWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPG---------GLN----IMGFNFGAQWPLVFAITSEFF 159 (234)
Q Consensus 97 i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~---------~l~----l~G~~~G~~~~~~p~l~~~~f 159 (234)
+...++.+++|+ +|||+.+....++..++.++.....+. .++ +.|++.|...+..+.+++|.+
T Consensus 46 ~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~ 125 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYA 125 (394)
T ss_pred HHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcC
Confidence 334567888888 899999999888888877766654321 111 789999999999999999999
Q ss_pred CCCCCCC
Q 038282 160 GPKNHKE 166 (234)
Q Consensus 160 G~~~~~~ 166 (234)
..++.+.
T Consensus 126 ~~~~r~~ 132 (394)
T TIGR00883 126 PPGKRGF 132 (394)
T ss_pred CcccchH
Confidence 9888875
No 188
>PRK11462 putative transporter; Provisional
Probab=96.70 E-value=0.075 Score=49.25 Aligned_cols=117 Identities=9% Similarity=0.016 Sum_probs=63.2
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHH
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIIL 119 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~ 119 (234)
.+..++|+.|+.+....++..............+.+...-++...+.+..+..+.+.+|-+++++ +++|+.+....
T Consensus 221 l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~ 300 (460)
T PRK11462 221 LRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTN 300 (460)
T ss_pred HHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence 45678888887766554444333222222233333333222333455667777888888888888 56676655443
Q ss_pred HHHHH-HHHHHHhhccch--hh----hHhhhhhchhhhhHHHHHHhhC
Q 038282 120 LVSWI-GHLLIAFNVPGG--LN----IMGFNFGAQWPLVFAITSEFFG 160 (234)
Q Consensus 120 ~~~~i-~~~ll~~~~~~~--l~----l~G~~~G~~~~~~p~l~~~~fG 160 (234)
.+.++ ++++...+.... ++ +.|++.+...++..++++|.-.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d 348 (460)
T PRK11462 301 ALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVD 348 (460)
T ss_pred HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 33333 332222222211 12 6677777777766677776644
No 189
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=96.69 E-value=0.013 Score=53.37 Aligned_cols=123 Identities=14% Similarity=0.105 Sum_probs=87.1
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc-----cchHHHHHH
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF-----FRRPLMLTI 117 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~-----~gr~~~l~~ 117 (234)
+++...+|+--.++...++......+=-..+=|+.-+ .|.|..+-+.+-++.+.+..+|-.+.|+ .+.+++...
T Consensus 201 ~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~ 280 (403)
T PF03209_consen 201 WRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAAL 280 (403)
T ss_pred HHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHH
Confidence 4567777777665555554443333211234455544 6999999999999999999999998888 566676677
Q ss_pred HHHHHHHHHHHHHhhc---cchhh-----hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 118 ILLVSWIGHLLIAFNV---PGGLN-----IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 118 ~~~~~~i~~~ll~~~~---~~~l~-----l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
.+...+++..++..+. +..++ ++|++.|....-..+...++-..++-+.
T Consensus 281 G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~ 337 (403)
T PF03209_consen 281 GCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGL 337 (403)
T ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhH
Confidence 7777777666555432 12222 9999999999999999999998888774
No 190
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=96.68 E-value=0.0087 Score=56.52 Aligned_cols=148 Identities=16% Similarity=0.108 Sum_probs=104.8
Q ss_pred HHHHHHHHHhhhhHHhHHh----hHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHH
Q 038282 54 LILFLATICGVGGTLLAID----NLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIG 125 (234)
Q Consensus 54 ~~l~~~~~~~~~~~~~~~~----~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~ 125 (234)
|.+.++.|+.......+.. ..+.+.++.+.+..+.+++.|+......+..++.+. +|.|.+.++..++..++
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g 124 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALG 124 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHH
Confidence 6666666555544444332 344556677888888999999999888887777777 78899999999999999
Q ss_pred HHHHHhhccch-h---h--hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----CCcc---c-------cccccccHHHHH
Q 038282 126 HLLIAFNVPGG-L---N--IMGFNFGAQWPLVFAITSEFFGPKNHKEP-----EDDL---N-------CIGVECFKLSFI 184 (234)
Q Consensus 126 ~~ll~~~~~~~-l---~--l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-----g~g~---~-------~d~~g~Y~~~f~ 184 (234)
+++-.++.+.+ + | +.|+|.|..+.-...++..+|..|+--.. |.|. + .-..-+++.+++
T Consensus 125 ~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l 204 (509)
T KOG2504|consen 125 LLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALL 204 (509)
T ss_pred HHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHH
Confidence 98888766533 2 3 88999999999999999999987765331 2221 1 113347888888
Q ss_pred -HHHHHHHHHHHHHHHHh
Q 038282 185 -MTAATLFSAFVSLILVL 201 (234)
Q Consensus 185 -~a~~~~va~~l~l~l~~ 201 (234)
.+++.+-.+.....++.
T Consensus 205 ~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 205 IFGGISLNVLVAGALLRP 222 (509)
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 77777666666665544
No 191
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.63 E-value=0.0063 Score=55.48 Aligned_cols=121 Identities=14% Similarity=0.121 Sum_probs=100.2
Q ss_pred hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-hh----hHhhhhhchhhhh
Q 038282 81 LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-LN----IMGFNFGAQWPLV 151 (234)
Q Consensus 81 ~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l~----l~G~~~G~~~~~~ 151 (234)
.+-++.+.+.+.+..++.+.+..++.|. +|++.-+.+.++++..+-.++.+....+ ++ +-|++.....+.-
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhh
Confidence 4666788899999999999999999998 7999999999999988888877765543 33 9999999999999
Q ss_pred HHHHHHhhCCCCC-CCC--------------C---CccccccccccHHHHH-HHHHHHHHHHHHHHHHhh
Q 038282 152 FAITSEFFGPKNH-KEP--------------E---DDLNCIGVECFKLSFI-MTAATLFSAFVSLILVLM 202 (234)
Q Consensus 152 p~l~~~~fG~~~~-~~~--------------g---~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l~~~ 202 (234)
-++++|.|+.++. ++. | +|..||. .+|..+|+ .++++++...+.+++..+
T Consensus 181 lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~-~Gk~aPFlVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 181 LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEF-AGKSAPFLVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhh-cCCcCcHHHHHHHHHHHHHHHHheeCc
Confidence 9999999999985 431 2 5665554 56889999 999999999998887654
No 192
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=96.57 E-value=0.035 Score=49.69 Aligned_cols=123 Identities=15% Similarity=0.074 Sum_probs=72.4
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccccchHH--HHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGFFRRPL--MLTIIL 119 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~~gr~~--~l~~~~ 119 (234)
..++.+|++++|...+..++............+.+.++ .|.++.+.+.+..+..++..+|.++.+++.+|. ......
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~ 278 (394)
T PRK11652 199 SYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSV 278 (394)
T ss_pred HHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34678899999876655444332222223344556666 799998888888888888888888888833222 222222
Q ss_pred HHHHHHHHHHHh---hc--cch-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 120 LVSWIGHLLIAF---NV--PGG-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 120 ~~~~i~~~ll~~---~~--~~~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
....++.+++.. .. ... ++ +.|++.|...+.......+.+. ++.+.
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~ 334 (394)
T PRK11652 279 ICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGT 334 (394)
T ss_pred HHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchH
Confidence 222222222211 11 111 11 7788888888888888888775 44454
No 193
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=96.48 E-value=0.012 Score=53.80 Aligned_cols=94 Identities=21% Similarity=0.231 Sum_probs=73.9
Q ss_pred hHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch---hh-----hH
Q 038282 73 NLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG---LN-----IM 140 (234)
Q Consensus 73 ~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~---l~-----l~ 140 (234)
-.+.+.++.|+|+.|.+++.++-.+...+.|+..|. +|.|++..+..++..+-++.+..+.+.. .+ +.
T Consensus 36 l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~ 115 (417)
T COG2223 36 LGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLL 115 (417)
T ss_pred HHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHH
Confidence 344455778999999999999999999999999998 7888888888888887777776654422 22 33
Q ss_pred hhhhhchhhhhHHHHHHhhCCCCCCCC
Q 038282 141 GFNFGAQWPLVFAITSEFFGPKNHKEP 167 (234)
Q Consensus 141 G~~~G~~~~~~p~l~~~~fG~~~~~~~ 167 (234)
|+ .|+.+++.-+.+++.|.+++.|..
T Consensus 116 G~-~GasFav~m~~~s~~fP~~~qG~A 141 (417)
T COG2223 116 GL-AGASFAVGMPNASFFFPKEKQGLA 141 (417)
T ss_pred hc-ccceehcccccccccCChhhhhHH
Confidence 33 466778888889999999999863
No 194
>PRK15075 citrate-proton symporter; Provisional
Probab=96.47 E-value=0.026 Score=51.51 Aligned_cols=96 Identities=21% Similarity=0.168 Sum_probs=68.4
Q ss_pred HhhHHHHHHhhCCChhhHH-HHHHHHH-----Hhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch----
Q 038282 71 IDNLRQIGTSLGYPKRGIS-TFVSLVN-----IWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG---- 136 (234)
Q Consensus 71 ~~~~~~~~~~~G~s~~~aa-~~~si~~-----i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~---- 136 (234)
....+.+.++.+.++.+.+ ...++.. +...+|.+++|+ +|||+.+.....+.+++.++.....+..
T Consensus 35 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~ 114 (434)
T PRK15075 35 GFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGL 114 (434)
T ss_pred HHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHH
Confidence 3456667788888766543 3333222 223467778888 8999999998888887776666543311
Q ss_pred -----hh----hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 137 -----LN----IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 137 -----l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
++ +.|++.|...+..+.+++|++..++.++
T Consensus 115 ~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~ 153 (434)
T PRK15075 115 AAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGF 153 (434)
T ss_pred HHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchH
Confidence 11 8899999999999999999999988886
No 195
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.39 E-value=0.0095 Score=57.19 Aligned_cols=114 Identities=14% Similarity=0.049 Sum_probs=63.0
Q ss_pred CCCCHHHHhcc-HHHHHHHHHHHHhhhhHHhHHhhHHHHHHhh-CCCh---hhHHHHHHHHHHhcccccccccc----cc
Q 038282 40 EDYTILQALFS-MDMLILFLATICGVGGTLLAIDNLRQIGTSL-GYPK---RGISTFVSLVNIWNCLGRVVSGF----FR 110 (234)
Q Consensus 40 ~~~~~~~~lk~-~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~-G~s~---~~aa~~~si~~i~~~vGRl~~G~----~g 110 (234)
.++-+.+++|+ +.|+..++..++..+..+......+...... +-+. ...+......+.+..+|.++.|+ ++
T Consensus 298 ~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir 377 (599)
T PF06609_consen 298 DPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIR 377 (599)
T ss_pred CCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHcc
Confidence 34567789998 5577655555554434444444455554443 3333 24556666777777888888887 45
Q ss_pred hHHHH-HHHHHHHHHHHHHHHhhcc---chh--h--hHhhhhhchhhhhHH
Q 038282 111 RPLML-TIILLVSWIGHLLIAFNVP---GGL--N--IMGFNFGAQWPLVFA 153 (234)
Q Consensus 111 r~~~l-~~~~~~~~i~~~ll~~~~~---~~l--~--l~G~~~G~~~~~~p~ 153 (234)
|.+.. +++.+++.+++.++....+ ... + +.|++.|........
T Consensus 378 ~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~ 428 (599)
T PF06609_consen 378 HIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIV 428 (599)
T ss_pred chhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHH
Confidence 55554 4555555555444443222 111 2 666666665544433
No 196
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=96.21 E-value=0.0098 Score=55.33 Aligned_cols=122 Identities=8% Similarity=-0.050 Sum_probs=81.1
Q ss_pred HHHHhccHHHHHHHHHHHH-hhh-hHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 44 ILQALFSMDMLILFLATIC-GVG-GTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~-~~~-~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
..+.+++|..|...+..++ ... .+.....+. ......|+++.+.+.+.+..++++.+|-.+.++ ++.++++.+
T Consensus 245 l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~-~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~ 323 (468)
T TIGR00788 245 LRGAIQLLEIAKPLIFIFLSYANLPGASGSVFC-ATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGV 323 (468)
T ss_pred HHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEE-EEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHH
Confidence 4567888998875554444 221 111100000 111357999999999999999999999999998 677777777
Q ss_pred HHHHHHHHHHHHHh-----h----ccchhh------hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 118 ILLVSWIGHLLIAF-----N----VPGGLN------IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 118 ~~~~~~i~~~ll~~-----~----~~~~l~------l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
..++.+++.+.... . .+...+ +.+++.|..+.....++.+....++-++
T Consensus 324 ~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt 387 (468)
T TIGR00788 324 TTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESS 387 (468)
T ss_pred HHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceeh
Confidence 77777665533221 0 011111 7788888888888899999998888776
No 197
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.16 E-value=0.033 Score=53.93 Aligned_cols=84 Identities=19% Similarity=0.197 Sum_probs=64.2
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHH-hcccccccccc----c--chHHHH
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNI-WNCLGRVVSGF----F--RRPLML 115 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i-~~~vGRl~~G~----~--gr~~~l 115 (234)
.++++|+|.||...+..++.......+...++.+.++ .|+++.+++.+.++..+ +..+|.++.|+ + +.++.+
T Consensus 323 ~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~ 402 (633)
T TIGR00805 323 IKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAA 402 (633)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHH
Confidence 4578999999998888887777766677889999886 69999999998888776 56789999998 2 345556
Q ss_pred HHHHHHHHHHHH
Q 038282 116 TIILLVSWIGHL 127 (234)
Q Consensus 116 ~~~~~~~~i~~~ 127 (234)
....++..++++
T Consensus 403 ~~~~~~~~~~~~ 414 (633)
T TIGR00805 403 YFAICLSTLSYL 414 (633)
T ss_pred HHHHHHHHHHHH
Confidence 666655555543
No 198
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=95.86 E-value=0.071 Score=48.17 Aligned_cols=90 Identities=13% Similarity=0.065 Sum_probs=59.0
Q ss_pred HHhhHHHHHH-hhCCChhhHHHHHHHHHHhcccccccccc--------cch-HHHHHHHHHHHHHHHHHHHhhccc----
Q 038282 70 AIDNLRQIGT-SLGYPKRGISTFVSLVNIWNCLGRVVSGF--------FRR-PLMLTIILLVSWIGHLLIAFNVPG---- 135 (234)
Q Consensus 70 ~~~~~~~~~~-~~G~s~~~aa~~~si~~i~~~vGRl~~G~--------~gr-~~~l~~~~~~~~i~~~ll~~~~~~---- 135 (234)
+..++.++.+ +.|+|+.+++.++++..+.+.+..++.|+ .|| |..+.....+.+++.+++....+.
T Consensus 18 ~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~ 97 (437)
T TIGR00792 18 VSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATG 97 (437)
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcch
Confidence 3345555555 57999999999999999999999999999 345 445666666666666555442211
Q ss_pred -hhh------hHhhhhhchhhhhHHHHHHhh
Q 038282 136 -GLN------IMGFNFGAQWPLVFAITSEFF 159 (234)
Q Consensus 136 -~l~------l~G~~~G~~~~~~p~l~~~~f 159 (234)
..+ +++.+++.......++.+++.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~ 128 (437)
T TIGR00792 98 KLVYAYITYILLGLFYSFVNIPYWSLVPAIT 128 (437)
T ss_pred HHHHHHHHHHHHHHHHHhhcccHhhCccccc
Confidence 111 556666554444455566655
No 199
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.80 E-value=0.036 Score=51.25 Aligned_cols=119 Identities=18% Similarity=0.181 Sum_probs=68.9
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc-cchHH----HHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF-FRRPL----MLTI 117 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~-~gr~~----~l~~ 117 (234)
+.++.++|++|.++.+.+.++.+.-......+-......|++...++....+.-+...+|.++.|. .+|.+ ++++
T Consensus 258 si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v 337 (480)
T KOG2563|consen 258 SIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLV 337 (480)
T ss_pred HHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHH
Confidence 357899999998877666544433333333333334455888877888888888889999999998 45543 3333
Q ss_pred HHHHHHHH-HHHHHh-hcc-c--hhh----hHhhhhhchhhhhHHHHHHhhCC
Q 038282 118 ILLVSWIG-HLLIAF-NVP-G--GLN----IMGFNFGAQWPLVFAITSEFFGP 161 (234)
Q Consensus 118 ~~~~~~i~-~~ll~~-~~~-~--~l~----l~G~~~G~~~~~~p~l~~~~fG~ 161 (234)
.+....++ +.+... ... . .+| ++|++.-+..++---+-.|...+
T Consensus 338 ~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyP 390 (480)
T KOG2563|consen 338 LYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYP 390 (480)
T ss_pred HHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccc
Confidence 33333333 222221 111 1 123 77777777766554444444433
No 200
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=95.59 E-value=0.036 Score=50.50 Aligned_cols=109 Identities=9% Similarity=0.105 Sum_probs=75.5
Q ss_pred HHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccchh-----hhHhhhhhchhhhhHHHHHHhhCCCCC
Q 038282 94 LVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGGL-----NIMGFNFGAQWPLVFAITSEFFGPKNH 164 (234)
Q Consensus 94 i~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~l-----~l~G~~~G~~~~~~p~l~~~~fG~~~~ 164 (234)
+..+....|-++.|+ +|||+++.+.++++++..+++........ +..-++..+.+.+.-.+++|+|.+.-.
T Consensus 389 itslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavR 468 (528)
T KOG0253|consen 389 ITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVR 468 (528)
T ss_pred HHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhh
Confidence 455677899999998 89999999999999988877776543221 245556666666666778888887777
Q ss_pred CCC---------CCccccc------cccccHHHHHHHHHHHHHHHHHHHHHhh
Q 038282 165 KEP---------EDDLNCI------GVECFKLSFIMTAATLFSAFVSLILVLM 202 (234)
Q Consensus 165 ~~~---------g~g~~~d------~~g~Y~~~f~~a~~~~va~~l~l~l~~~ 202 (234)
+.- .+|..+. ....|-+.++.+++++++.+++.+++.+
T Consensus 469 atgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilagIavcffPiE 521 (528)
T KOG0253|consen 469 ATGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAGIAVCFFPIE 521 (528)
T ss_pred hcchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHHHHheeeeec
Confidence 652 1333322 2334656666778888888888777654
No 201
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=95.31 E-value=0.068 Score=49.78 Aligned_cols=156 Identities=16% Similarity=0.145 Sum_probs=95.6
Q ss_pred HhhHHHHHHhhCCChhhHHH----HHH----HHHHhccc-ccccccc----cchHHHHHHHHHHHHHHHHHHHhhcc-c-
Q 038282 71 IDNLRQIGTSLGYPKRGIST----FVS----LVNIWNCL-GRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVP-G- 135 (234)
Q Consensus 71 ~~~~~~~~~~~G~s~~~aa~----~~s----i~~i~~~v-GRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~-~- 135 (234)
.-+++.+.++.|+.+..... -++ ++++++.+ |-.+... +|||++....++++++..+.+..+-. .
T Consensus 324 nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~ 403 (538)
T KOG0252|consen 324 NLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLE 403 (538)
T ss_pred ccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCccccc
Confidence 34677888888876654443 222 33333333 3333333 79999999999999887776655322 1
Q ss_pred ---h---hh---hHhhhhhchhhhhHHHHHHhhCCCCCCCC----------C-------Cccc----cccccccHHHHH-
Q 038282 136 ---G---LN---IMGFNFGAQWPLVFAITSEFFGPKNHKEP----------E-------DDLN----CIGVECFKLSFI- 184 (234)
Q Consensus 136 ---~---l~---l~G~~~G~~~~~~p~l~~~~fG~~~~~~~----------g-------~g~~----~d~~g~Y~~~f~- 184 (234)
. +| .+-..+|...+.+ .+-+|.|.++-.+.. | .... +--..+++.+|+
T Consensus 404 ~~~Gf~v~y~l~~ff~NFGPn~ttf-ivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i 482 (538)
T KOG0252|consen 404 NTIGFVVLYSLTFFFGNFGPNATTF-IVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFII 482 (538)
T ss_pred ccCceeehHHHHHHHHhcCCCceeE-EeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHH
Confidence 1 23 3333344443332 344678888877762 1 1111 112467999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhHHhhccccchhhhhhc
Q 038282 185 MTAATLFSAFVSLILVLMTRKFYKSDIHQRFREAAAKSAADKGEMEQYN 233 (234)
Q Consensus 185 ~a~~~~va~~l~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.+++++++.++.++++..++|.. |-+ ++++++...+|++||-|
T Consensus 483 ~~~~~~~gi~~T~l~pEtk~~~l-eei-----~~e~~~~~~~~~~~~~~ 525 (538)
T KOG0252|consen 483 LAGCMLLGILFTLLIPETKGKSL-EEI-----SNEEESNGGEGKMEEND 525 (538)
T ss_pred HHHHHHHhHheeEEeecccccCH-HHh-----cChhhcccCCCccccCC
Confidence 99999999999988884444443 333 66777888888888764
No 202
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=95.29 E-value=0.11 Score=48.67 Aligned_cols=131 Identities=11% Similarity=0.072 Sum_probs=82.7
Q ss_pred HHhhHHHHHHh--hCCChhhHHHHHHHHHHhcccccccccc----cch-HHHHHHHHHHHHHHHHHHH-hhc-cc-hhh-
Q 038282 70 AIDNLRQIGTS--LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRR-PLMLTIILLVSWIGHLLIA-FNV-PG-GLN- 138 (234)
Q Consensus 70 ~~~~~~~~~~~--~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr-~~~l~~~~~~~~i~~~ll~-~~~-~~-~l~- 138 (234)
+....-++.++ .+.+++..+.+++..+++.+++.+.+|+ .+. |+-++.+++++++|+++.. ... +. ..|
T Consensus 53 ~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~ 132 (488)
T KOG2325|consen 53 YLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYL 132 (488)
T ss_pred EEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHH
Confidence 34567788887 7889999999999999999999999998 222 5567888888888887763 221 11 222
Q ss_pred ------hHhhhhhchhhhhHHHHHHhh-CCCCCCC-------C----------------C-Ccccc---ccccccHHHHH
Q 038282 139 ------IMGFNFGAQWPLVFAITSEFF-GPKNHKE-------P----------------E-DDLNC---IGVECFKLSFI 184 (234)
Q Consensus 139 ------l~G~~~G~~~~~~p~l~~~~f-G~~~~~~-------~----------------g-~g~~~---d~~g~Y~~~f~ 184 (234)
+.|++.|.....-..+...-. +.|..+. . + -|+.. ..-+.|+.+-+
T Consensus 133 mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w 212 (488)
T KOG2325|consen 133 MLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAW 212 (488)
T ss_pred HHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHH
Confidence 667776665444332222111 1111110 0 1 12211 12467999888
Q ss_pred -HHHHHHHHHHHHHHHH
Q 038282 185 -MTAATLFSAFVSLILV 200 (234)
Q Consensus 185 -~a~~~~va~~l~l~l~ 200 (234)
++.+.++.+++..+.-
T Consensus 213 ~m~i~~i~~~v~i~~~f 229 (488)
T KOG2325|consen 213 LMAILWIIYIVIILFFF 229 (488)
T ss_pred HHHHHHHHHHHHHHhhe
Confidence 8888888887776653
No 203
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=95.16 E-value=0.11 Score=48.94 Aligned_cols=119 Identities=23% Similarity=0.238 Sum_probs=79.0
Q ss_pred HhhCCChhhHHHHHHHHHHhcccccccccc-cchHHHHHHHHHHHHHHHHHHHh----hccch-h--h--hHhhhhhchh
Q 038282 79 TSLGYPKRGISTFVSLVNIWNCLGRVVSGF-FRRPLMLTIILLVSWIGHLLIAF----NVPGG-L--N--IMGFNFGAQW 148 (234)
Q Consensus 79 ~~~G~s~~~aa~~~si~~i~~~vGRl~~G~-~gr~~~l~~~~~~~~i~~~ll~~----~~~~~-l--~--l~G~~~G~~~ 148 (234)
+|.+....+.+.+.+++.++-++|.+.+|. ..|-. +...+..+++...++.. ..+.+ + . +.|+.-++.+
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~-ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~w 152 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFP-LSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGW 152 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccc
Confidence 455677778999999999999999999999 33333 22222222222222211 11222 1 1 9999999999
Q ss_pred hhhHHHHHHhhCCCCCCCC----------C---Ccccc---------ccccccHHHHH-HHHHHHHHHHHHHH
Q 038282 149 PLVFAITSEFFGPKNHKEP----------E---DDLNC---------IGVECFKLSFI-MTAATLFSAFVSLI 198 (234)
Q Consensus 149 ~~~p~l~~~~fG~~~~~~~----------g---~g~~~---------d~~g~Y~~~f~-~a~~~~va~~l~l~ 198 (234)
|....+++..|+.++.+.. | ++.+. ...-+|++.|+ .++++++..+++++
T Consensus 153 P~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~ 225 (495)
T KOG2533|consen 153 PGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFF 225 (495)
T ss_pred hHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEE
Confidence 9999999999999999863 1 11111 12358999999 77777777766544
No 204
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=94.95 E-value=0.32 Score=43.48 Aligned_cols=130 Identities=15% Similarity=0.088 Sum_probs=73.8
Q ss_pred hHHhhHHHHHHhhCCChhhHHHH--HHHHHHhcccccccc-cc----cchHHHHHHHH-HHHHHHHHHHH-h-hccc-h-
Q 038282 69 LAIDNLRQIGTSLGYPKRGISTF--VSLVNIWNCLGRVVS-GF----FRRPLMLTIIL-LVSWIGHLLIA-F-NVPG-G- 136 (234)
Q Consensus 69 ~~~~~~~~~~~~~G~s~~~aa~~--~si~~i~~~vGRl~~-G~----~gr~~~l~~~~-~~~~i~~~ll~-~-~~~~-~- 136 (234)
.....++.+.++.|+|..+.+.+ .++..+...+..+++ ++ .|||+...+.. ++.+++...+. . .... .
T Consensus 19 ~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (390)
T TIGR02718 19 LAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAG 98 (390)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHH
Confidence 35578889999999999988876 455566676666666 43 57776653333 22222222222 1 1111 1
Q ss_pred h-h----hHhhhhhchhhhhHHHHHHhhCCCCCCCC----------C---C----ccccccccccHHHHH-HHHHHHHHH
Q 038282 137 L-N----IMGFNFGAQWPLVFAITSEFFGPKNHKEP----------E---D----DLNCIGVECFKLSFI-MTAATLFSA 193 (234)
Q Consensus 137 l-~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~----------g---~----g~~~d~~g~Y~~~f~-~a~~~~va~ 193 (234)
+ . +..++....-+..-.+..|....++.+.. | + ++.. ..-+++.+|+ .+++.++..
T Consensus 99 ~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~-~~~gw~~~f~~~a~l~~~~~ 177 (390)
T TIGR02718 99 WAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLF-GKFGQRPAFLLVACVPLASL 177 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCHHHHHHHHHHHHHHHH
Confidence 1 1 33344444445555566777766666542 1 1 1222 2346899999 888777766
Q ss_pred HHHHHH
Q 038282 194 FVSLIL 199 (234)
Q Consensus 194 ~l~l~l 199 (234)
+..+.+
T Consensus 178 ~~~~~~ 183 (390)
T TIGR02718 178 VCVLWL 183 (390)
T ss_pred HHHHHc
Confidence 665444
No 205
>PRK09669 putative symporter YagG; Provisional
Probab=94.83 E-value=0.28 Score=44.91 Aligned_cols=89 Identities=11% Similarity=0.061 Sum_probs=57.5
Q ss_pred hhHHHH-HHhhCCChhhHHHHHHHHHHhcccccccccc--------cch-HHHHHHHHHHHHHHHHHHHhhcc---c--h
Q 038282 72 DNLRQI-GTSLGYPKRGISTFVSLVNIWNCLGRVVSGF--------FRR-PLMLTIILLVSWIGHLLIAFNVP---G--G 136 (234)
Q Consensus 72 ~~~~~~-~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~--------~gr-~~~l~~~~~~~~i~~~ll~~~~~---~--~ 136 (234)
.++..+ .++.|+|..+++.++++..+.+.+.-++.|+ .|| |.++....++.+++..++..... . .
T Consensus 30 ~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~ 109 (444)
T PRK09669 30 LFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKI 109 (444)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHH
Confidence 344444 4457999999999999999999999999999 344 45566666666665544443211 1 1
Q ss_pred hh------hHhhhhhchhhhhHHHHHHhhC
Q 038282 137 LN------IMGFNFGAQWPLVFAITSEFFG 160 (234)
Q Consensus 137 l~------l~G~~~G~~~~~~p~l~~~~fG 160 (234)
+| +++.++.......-++.+|+..
T Consensus 110 ~~~~~~~~l~~~~~t~~~ip~~al~~~~t~ 139 (444)
T PRK09669 110 IYACVTYILLSLVYTAINVPYCAMPGAITN 139 (444)
T ss_pred HHHHHHHHHHHHHHHhhcchHHHhHHHhcC
Confidence 22 4455555555555566677663
No 206
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=94.75 E-value=0.089 Score=51.25 Aligned_cols=120 Identities=15% Similarity=0.232 Sum_probs=84.8
Q ss_pred hhCCChhhHHHHHHHHHHhcccccccccc-----cchHHHHHHHHHHHHHHHHHHHhhc-cc-------h-hh----hHh
Q 038282 80 SLGYPKRGISTFVSLVNIWNCLGRVVSGF-----FRRPLMLTIILLVSWIGHLLIAFNV-PG-------G-LN----IMG 141 (234)
Q Consensus 80 ~~G~s~~~aa~~~si~~i~~~vGRl~~G~-----~gr~~~l~~~~~~~~i~~~ll~~~~-~~-------~-l~----l~G 141 (234)
..|.++..++.+...+....-+..++.|+ +|+++++.+..++..+++.++.... +. . .+ +..
T Consensus 17 ~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia 96 (654)
T TIGR00926 17 FLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIA 96 (654)
T ss_pred HcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHH
Confidence 47999988888888777777777777777 8999999999999888887776531 11 1 11 888
Q ss_pred hhhhchhhhhHHHHHHhhCCCCCCCC-------------C-------Ccccccc------ccccHHHHH-HHHHHHHHHH
Q 038282 142 FNFGAQWPLVFAITSEFFGPKNHKEP-------------E-------DDLNCIG------VECFKLSFI-MTAATLFSAF 194 (234)
Q Consensus 142 ~~~G~~~~~~p~l~~~~fG~~~~~~~-------------g-------~g~~~d~------~g~Y~~~f~-~a~~~~va~~ 194 (234)
.|.|+.-+.+.+...|-|..++..+. | .+++.+. ..+|..+|. .+++++++.+
T Consensus 97 ~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~l 176 (654)
T TIGR00926 97 LGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALI 176 (654)
T ss_pred hhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHH
Confidence 89999999999999999976543321 1 1111111 236888888 7777777776
Q ss_pred HHHHH
Q 038282 195 VSLIL 199 (234)
Q Consensus 195 l~l~l 199 (234)
+.+..
T Consensus 177 vf~~g 181 (654)
T TIGR00926 177 VFMAG 181 (654)
T ss_pred HHHHh
Confidence 65543
No 207
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.52 E-value=0.22 Score=48.86 Aligned_cols=65 Identities=14% Similarity=0.138 Sum_probs=52.6
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhc-ccccccccc
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWN-CLGRVVSGF 108 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~-~vGRl~~G~ 108 (234)
.++.++||.|....++..+-.........++|.+.+. .|.+++.|..+...+++.. ++|-++.|+
T Consensus 385 ~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~ 451 (735)
T KOG3626|consen 385 IKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGL 451 (735)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccce
Confidence 5688999999888887777666666677889999886 4999999999998888644 577778888
No 208
>PF12832 MFS_1_like: MFS_1 like family
Probab=94.25 E-value=0.18 Score=35.10 Aligned_cols=48 Identities=17% Similarity=0.224 Sum_probs=40.3
Q ss_pred HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 70 AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 70 ~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
+..+++-+.++.|+++.+.+.+.++..+...++.++||+ .++++.+..
T Consensus 19 ~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~ 70 (77)
T PF12832_consen 19 LYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILL 70 (77)
T ss_pred HHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHH
Confidence 456788888999999999999999999999999999999 455554443
No 209
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=94.06 E-value=0.085 Score=48.53 Aligned_cols=61 Identities=16% Similarity=0.023 Sum_probs=44.2
Q ss_pred hccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc
Q 038282 48 LFSMDMLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF 108 (234)
Q Consensus 48 lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~ 108 (234)
.|++.||.+-..+++.-..--......+...++ .|+|..+.+.+.|+.++...+..++.|.
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~ 65 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGF 65 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 578889987666655433322244566677765 7999999999999999999999999998
No 210
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=94.05 E-value=0.2 Score=45.82 Aligned_cols=96 Identities=11% Similarity=-0.044 Sum_probs=72.8
Q ss_pred HHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhcc-ch--hh---
Q 038282 70 AIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVP-GG--LN--- 138 (234)
Q Consensus 70 ~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~-~~--l~--- 138 (234)
....+.|..++ ..++..+++.+-...-.+-..+.+..|+ +|.|..+.+.+.++++++.+++-+.. .. .+
T Consensus 31 l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~ 110 (422)
T COG0738 31 LNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVA 110 (422)
T ss_pred cchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHH
Confidence 44445555554 6899999988777777777777888888 89999999999999999988865332 21 11
Q ss_pred --hHhhhhhchhhhhHHHHHHhhCCCCCC
Q 038282 139 --IMGFNFGAQWPLVFAITSEFFGPKNHK 165 (234)
Q Consensus 139 --l~G~~~G~~~~~~p~l~~~~fG~~~~~ 165 (234)
+.|.|.|..-+...+++..+...++-+
T Consensus 111 lFila~Gi~~LetaaNp~v~~lg~~~~a~ 139 (422)
T COG0738 111 LFILASGIGLLETAANPYVTLLGKPESAA 139 (422)
T ss_pred HHHHHhhhHHHHhccchHHHHhCCchhHH
Confidence 778888888899999999888776444
No 211
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=93.77 E-value=0.66 Score=42.06 Aligned_cols=128 Identities=15% Similarity=0.021 Sum_probs=90.8
Q ss_pred hhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccchhh----hHhhh
Q 038282 72 DNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGGLN----IMGFN 143 (234)
Q Consensus 72 ~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~l~----l~G~~ 143 (234)
.-++.+-++.|.|.+.++.+.++--++-.+..++..+ +|..+.+...+++.+++.++=.......++ +.|.+
T Consensus 33 PLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~~~~L~~gt~l~G~g 112 (395)
T COG2807 33 PLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGGLPLLFLGTLLAGAG 112 (395)
T ss_pred hhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhh
Confidence 4456666778999999999888888777777777776 677777777777777777554433222344 88999
Q ss_pred hhchhhhhHHHHHHhhCCCCCCC---C----------CCcc---ccccccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 144 FGAQWPLVFAITSEFFGPKNHKE---P----------EDDL---NCIGVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 144 ~G~~~~~~p~l~~~~fG~~~~~~---~----------g~g~---~~d~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
.+..-.+.|.++-+.|+.|--.- + +++. +-...++|+.+.. -+..++++.++.+.-
T Consensus 113 Iav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq 185 (395)
T COG2807 113 IAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQ 185 (395)
T ss_pred HHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999998765432 1 1121 1222368999998 888888887765443
No 212
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=93.31 E-value=0.99 Score=41.97 Aligned_cols=145 Identities=18% Similarity=0.069 Sum_probs=85.1
Q ss_pred HHHHHHHHHHhhhhHHhHHhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cc-----hHHHHHHHHHHH
Q 038282 53 MLILFLATICGVGGTLLAIDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FR-----RPLMLTIILLVS 122 (234)
Q Consensus 53 F~~l~~~~~~~~~~~~~~~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~g-----r~~~l~~~~~~~ 122 (234)
...+...++.-... ..+...+.++.++ .|+|..+.+...++.++...+ +++||. ++ ||+.+.+..++.
T Consensus 28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~ 105 (468)
T TIGR00788 28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLG 105 (468)
T ss_pred HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHH
Confidence 33333334433333 3344566777775 699999999999999988777 555887 43 666666665555
Q ss_pred H-HHHHHHHhhccc-h--h--h-hHhhhhhchhhhhHHHHHHhhCCCCCCCC-------------C-------Ccccccc
Q 038282 123 W-IGHLLIAFNVPG-G--L--N-IMGFNFGAQWPLVFAITSEFFGPKNHKEP-------------E-------DDLNCIG 175 (234)
Q Consensus 123 ~-i~~~ll~~~~~~-~--l--~-l~G~~~G~~~~~~p~l~~~~fG~~~~~~~-------------g-------~g~~~d~ 175 (234)
. +++..+....+. . . . +.+++.+..-...-.+..|... ++.... | +|... .
T Consensus 106 ~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~-~ 183 (468)
T TIGR00788 106 SAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLL-D 183 (468)
T ss_pred HHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH-H
Confidence 2 333222221111 1 1 1 7777777777888888888887 333321 1 22222 2
Q ss_pred ccccHHHHH-HHHHHHHHHHHHHHHHh
Q 038282 176 VECFKLSFI-MTAATLFSAFVSLILVL 201 (234)
Q Consensus 176 ~g~Y~~~f~-~a~~~~va~~l~l~l~~ 201 (234)
..+++..|+ .+++.++..+..++++.
T Consensus 184 ~~~~~~~f~~~a~l~ll~~~~~~~~~E 210 (468)
T TIGR00788 184 KTLTRILFLITAALLLLQLFVSNLSKE 210 (468)
T ss_pred hcCcchHHHHHHHHHHHHHHHHHhccc
Confidence 235888888 77777766444444433
No 213
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=93.10 E-value=1.5 Score=41.22 Aligned_cols=152 Identities=14% Similarity=0.022 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHhhhhHHhHHhhHHHH-HHhh-CCCh------hh----HHHHHHHHHHhcccccccccc----cc-hHH
Q 038282 51 MDMLILFLATICGVGGTLLAIDNLRQI-GTSL-GYPK------RG----ISTFVSLVNIWNCLGRVVSGF----FR-RPL 113 (234)
Q Consensus 51 ~~F~~l~~~~~~~~~~~~~~~~~~~~~-~~~~-G~s~------~~----aa~~~si~~i~~~vGRl~~G~----~g-r~~ 113 (234)
+.+|.+++..+++...-+.+..+..++ .++. +-++ ++ ..+...+.++.+.+..++.-+ +| ||.
T Consensus 258 ~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~ 337 (477)
T TIGR01301 258 RPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKR 337 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 678999999888886655544444444 4442 2221 11 233333444444433333333 66 467
Q ss_pred HHHHHHHHHHHHHHHHHh-hc------c--------------ch-h---h-hHhhhhhchhhhhHHHHHHhhCC--CCCC
Q 038282 114 MLTIILLVSWIGHLLIAF-NV------P--------------GG-L---N-IMGFNFGAQWPLVFAITSEFFGP--KNHK 165 (234)
Q Consensus 114 ~l~~~~~~~~i~~~ll~~-~~------~--------------~~-l---~-l~G~~~G~~~~~~p~l~~~~fG~--~~~~ 165 (234)
+..++.++.++++....+ .. + .. . + +.|+.+....++--++++++-.. ++.|
T Consensus 338 ~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G 417 (477)
T TIGR01301 338 LWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQG 417 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCc
Confidence 767887777766655542 11 0 01 1 2 89999999999999999998884 4445
Q ss_pred CC-----------------CCcccccccc-ccHHHHH-HHHHHHHHHHHHHHHHhh
Q 038282 166 EP-----------------EDDLNCIGVE-CFKLSFI-MTAATLFSAFVSLILVLM 202 (234)
Q Consensus 166 ~~-----------------g~g~~~d~~g-~Y~~~f~-~a~~~~va~~l~l~l~~~ 202 (234)
.+ +.|.+.+..| +-..++. .++++++++++++.+..|
T Consensus 418 ~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 418 LSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 42 2443333334 4456666 888888888887766443
No 214
>PF13347 MFS_2: MFS/sugar transport protein
Probab=92.95 E-value=0.29 Score=44.55 Aligned_cols=89 Identities=15% Similarity=0.157 Sum_probs=62.0
Q ss_pred hHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc--------cchH-HHHHHHHHHHHHHHHHHHhhcc----c--h
Q 038282 73 NLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF--------FRRP-LMLTIILLVSWIGHLLIAFNVP----G--G 136 (234)
Q Consensus 73 ~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~--------~gr~-~~l~~~~~~~~i~~~ll~~~~~----~--~ 136 (234)
++.++.++ .|+++...+.+..+..+.+.+--++.|. .||+ .++....++.+++..++....+ . .
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 45555555 5999999999999999999999999998 4544 4556677777777776665312 1 1
Q ss_pred -h-----h-hHhhhhhchhhhhHHHHHHhhCC
Q 038282 137 -L-----N-IMGFNFGAQWPLVFAITSEFFGP 161 (234)
Q Consensus 137 -l-----~-l~G~~~G~~~~~~p~l~~~~fG~ 161 (234)
. | ++.+++.......-++.+|+...
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~ 134 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPD 134 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCcccccc
Confidence 1 1 55666666666666677777754
No 215
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=92.86 E-value=1.5 Score=37.68 Aligned_cols=60 Identities=22% Similarity=0.391 Sum_probs=47.1
Q ss_pred hhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhh
Q 038282 72 DNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFN 132 (234)
Q Consensus 72 ~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~ 132 (234)
.+.+.+-+..|+|..+...+...-.++..+| +..|. .|.+.++.+..+...+|..+++..
T Consensus 23 ~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~ 86 (250)
T PF06813_consen 23 AYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLA 86 (250)
T ss_pred hhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555567999999999888888888876 77787 677788888888888888777663
No 216
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=92.44 E-value=0.17 Score=47.99 Aligned_cols=151 Identities=14% Similarity=0.117 Sum_probs=85.9
Q ss_pred HHhccHHHHHHHHHHHHhhhhHHh-HHhhHHHHHHhhCCChhhHHHHHHHHHHhccccc----ccccc----cchHHHHH
Q 038282 46 QALFSMDMLILFLATICGVGGTLL-AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGR----VVSGF----FRRPLMLT 116 (234)
Q Consensus 46 ~~lk~~~F~~l~~~~~~~~~~~~~-~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGR----l~~G~----~gr~~~l~ 116 (234)
+++.+++.-+++...+. ++.+.. +.+++-=+.++.|-.+..-+ +.++.+-+|- ++.++ +|+.+++.
T Consensus 366 ~~~~s~~~llff~~av~-mG~g~~lv~tFLfWHled~~~~~~LfG----v~~a~~~~gEI~~~ffs~klI~kiGHv~v~~ 440 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVV-MGAGVGLVFTFLFWHLEDLGGIKTLFG----VVSALCHAGEILFYFFSFKLIEKIGHVNVMY 440 (618)
T ss_pred HHhcCCCEEehhHHHHH-HHHHHHHHHHHHHHHHhhcCCcceeee----ehhhhhccchHHHHHHHHHHHHHhcccceee
Confidence 56666665443332222 222222 34455556677664443333 3333333333 33444 68888887
Q ss_pred HHHHHHHHHHHHHHhhccchh---h--hHhhhhhchhhhhHHHHHHhhCCCCCCCC---------C---------Ccccc
Q 038282 117 IILLVSWIGHLLIAFNVPGGL---N--IMGFNFGAQWPLVFAITSEFFGPKNHKEP---------E---------DDLNC 173 (234)
Q Consensus 117 ~~~~~~~i~~~ll~~~~~~~l---~--l~G~~~G~~~~~~p~l~~~~fG~~~~~~~---------g---------~g~~~ 173 (234)
+.+....+=.+.+....+++. . +-|+..+..|..+.+++++.-.++--.+. | +|...
T Consensus 441 lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v 520 (618)
T KOG3762|consen 441 LGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVV 520 (618)
T ss_pred ehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhh
Confidence 777766654444444444442 2 88999999999999999998877665531 1 33332
Q ss_pred ccccccHHHHH-HHHHHHHHHHHHHHHHhh
Q 038282 174 IGVECFKLSFI-MTAATLFSAFVSLILVLM 202 (234)
Q Consensus 174 d~~g~Y~~~f~-~a~~~~va~~l~l~l~~~ 202 (234)
..-+=+..|. ++..+++.+++.+.+++.
T Consensus 521 -~~fg~~ttf~~~giAcl~~l~~~~~iq~~ 549 (618)
T KOG3762|consen 521 -ERFGARTTFRIFGIACLVTLALFISIQLL 549 (618)
T ss_pred -eeehhHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 2233456666 666666666666666554
No 217
>PRK10429 melibiose:sodium symporter; Provisional
Probab=92.35 E-value=1.5 Score=40.57 Aligned_cols=89 Identities=12% Similarity=0.163 Sum_probs=59.1
Q ss_pred HhhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc--------cch-HHHHHHHHHHHHHHHHHHHhhc--c-c--
Q 038282 71 IDNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF--------FRR-PLMLTIILLVSWIGHLLIAFNV--P-G-- 135 (234)
Q Consensus 71 ~~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~--------~gr-~~~l~~~~~~~~i~~~ll~~~~--~-~-- 135 (234)
..++..+.++ .|+++.+.+.++++..+.+.+.-+++|+ +|| |.++..+.+.++++..+++.+. + .
T Consensus 26 ~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~ 105 (473)
T PRK10429 26 YMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQ 105 (473)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHH
Confidence 3445555555 5999999999999999999999999999 466 5566667677777655554421 1 1
Q ss_pred hhh------hHhhhhhchhhhhHHHHHHhh
Q 038282 136 GLN------IMGFNFGAQWPLVFAITSEFF 159 (234)
Q Consensus 136 ~l~------l~G~~~G~~~~~~p~l~~~~f 159 (234)
..| ++++++.......-++.+|+-
T Consensus 106 ~~~~~~~~~l~~~~~t~~~ip~~al~~~lt 135 (473)
T PRK10429 106 YVFVCVTYILWGMTYTIMDIPFWSLVPTLT 135 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcchHHhhhHHhC
Confidence 112 445555554444555666655
No 218
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=91.78 E-value=0.049 Score=51.82 Aligned_cols=83 Identities=18% Similarity=0.145 Sum_probs=0.0
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhh-CCChhhHHHHHHHHHH-hcccccccccc------cchHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSL-GYPKRGISTFVSLVNI-WNCLGRVVSGF------FRRPLM 114 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~-G~s~~~aa~~~si~~i-~~~vGRl~~G~------~gr~~~ 114 (234)
.+++++|||.|..+.++..+.......+..+++.+.|.+ +.++.+++.+..+..+ +.++|-++.|+ .+.++.
T Consensus 297 ~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~ 376 (539)
T PF03137_consen 297 ALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGA 376 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHH
Confidence 357899999998877777666666656777898988874 9999999998888776 56688888888 344444
Q ss_pred HHHHHHHHHHH
Q 038282 115 LTIILLVSWIG 125 (234)
Q Consensus 115 l~~~~~~~~i~ 125 (234)
+....++..++
T Consensus 377 ~~~~~v~~~v~ 387 (539)
T PF03137_consen 377 AKFCIVVSIVS 387 (539)
T ss_dssp -----------
T ss_pred HHHHHHHHHHH
Confidence 44444444433
No 219
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=91.53 E-value=0.9 Score=32.40 Aligned_cols=63 Identities=14% Similarity=0.076 Sum_probs=49.4
Q ss_pred HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhh
Q 038282 70 AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFN 132 (234)
Q Consensus 70 ~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~ 132 (234)
....+|.+.+|.++|..+++++-|.-.++-.+|-+...+ ..++..+..+++...+..+.+...
T Consensus 11 yTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 11 YTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 445788889999999999999999999999999999887 244556666777776666666553
No 220
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=90.81 E-value=4.3 Score=36.65 Aligned_cols=121 Identities=10% Similarity=0.008 Sum_probs=72.3
Q ss_pred HHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccchhh----hHhhhhhch
Q 038282 76 QIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGGLN----IMGFNFGAQ 147 (234)
Q Consensus 76 ~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~l~----l~G~~~G~~ 147 (234)
.+-++.|+++.+.+.+...--+.+.+-..+.|. +|||+.-++.+++.++++++-..+.-..++ +-|++....
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~~~~L~~GRvlgGiaTSLL 138 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSNYPVLLLGRVLGGIATSLL 138 (354)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence 334568999888776666555555555555565 899999888999988888665443222232 556666666
Q ss_pred hhhhHH-HHHHhhCCCCCCCC-------------------CCc----ccccccc-ccHHHHH-HHHHHHHHHHHHH
Q 038282 148 WPLVFA-ITSEFFGPKNHKEP-------------------EDD----LNCIGVE-CFKLSFI-MTAATLFSAFVSL 197 (234)
Q Consensus 148 ~~~~p~-l~~~~fG~~~~~~~-------------------g~g----~~~d~~g-~Y~~~f~-~a~~~~va~~l~l 197 (234)
++.+=+ ++.|. ..+.+.+- ++| ...|..+ +-..+|. ...+..++.+++.
T Consensus 139 fS~FEsW~V~Eh-~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 139 FSAFESWMVHEH-NKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred HHHHHHHHHHHH-HHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHH
Confidence 655544 34444 33344320 122 3333333 3578888 7777776666543
No 221
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=90.76 E-value=0.88 Score=41.89 Aligned_cols=161 Identities=14% Similarity=0.076 Sum_probs=96.4
Q ss_pred CCCCHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHH-HHhhCCChhhHHHHHHHHHHhcccccccccc----cc--hH
Q 038282 40 EDYTILQALFSMDMLILFLATICGVGGTLLAIDNLRQI-GTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FR--RP 112 (234)
Q Consensus 40 ~~~~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~-~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~g--r~ 112 (234)
++.+.++.+++|.-|....+...+..+.-+.-..++.. .+.+..+.-+.+..+--.++...+|-.++|. ++ |.
T Consensus 259 ~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~w 338 (464)
T KOG3764|consen 259 QGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRW 338 (464)
T ss_pred cCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhH
Confidence 45678999999988876555443332222222344443 3444544335566666677788899999998 55 43
Q ss_pred HHHHHHHHHHHHHHHHHHhhccch-h-h---hHhhhhhchhhhhHHHHHHhhCCCCCC---CC-----------------
Q 038282 113 LMLTIILLVSWIGHLLIAFNVPGG-L-N---IMGFNFGAQWPLVFAITSEFFGPKNHK---EP----------------- 167 (234)
Q Consensus 113 ~~l~~~~~~~~i~~~ll~~~~~~~-l-~---l~G~~~G~~~~~~p~l~~~~fG~~~~~---~~----------------- 167 (234)
...+.++++.++++...+++.... + . ..+++.|..-+..-+....+...+|.. .+
T Consensus 339 l~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~ 418 (464)
T KOG3764|consen 339 LLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAI 418 (464)
T ss_pred HHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhc
Confidence 333445555554444444443322 2 2 556666666677777777888888877 32
Q ss_pred C---CccccccccccHHHHH-HHHHHHHHHHHHHHHHh
Q 038282 168 E---DDLNCIGVECFKLSFI-MTAATLFSAFVSLILVL 201 (234)
Q Consensus 168 g---~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l~~ 201 (234)
| +|.+ ...-+|++.-. .+...++-+-+...++.
T Consensus 419 GP~~gg~i-v~~iGF~wl~~iig~~n~iyapvl~ll~~ 455 (464)
T KOG3764|consen 419 GPTFGGSL-VEAIGFEWLMTIIGILNLIYAPVLLLLRI 455 (464)
T ss_pred cccccchh-eeehhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 3333 23456777777 88888877777776654
No 222
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.51 E-value=3.9 Score=38.27 Aligned_cols=121 Identities=21% Similarity=0.279 Sum_probs=64.5
Q ss_pred HHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHH---hhCCC-hhhHHHHHHHHHHhcccccccccc-------cchHH
Q 038282 45 LQALFSMDMLILFLATICGVGGTLLAIDNLRQIGT---SLGYP-KRGISTFVSLVNIWNCLGRVVSGF-------FRRPL 113 (234)
Q Consensus 45 ~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~---~~G~s-~~~aa~~~si~~i~~~vGRl~~G~-------~gr~~ 113 (234)
.+.+++++...+...++.....-...+.+.+.-.. .++.. ....+.-.-..+++..++.+.++. +||+.
T Consensus 234 ~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~ 313 (461)
T KOG3098|consen 234 FKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKP 313 (461)
T ss_pred HHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCc
Confidence 45678887766555544432222222333333221 22332 222333333444455555555554 67777
Q ss_pred HHHHHHHHHHHHHHHHHhhcc--c--------h--------h----h-hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 114 MLTIILLVSWIGHLLIAFNVP--G--------G--------L----N-IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 114 ~l~~~~~~~~i~~~ll~~~~~--~--------~--------l----~-l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
.+.+...+-.+++++.....+ . . + + +.|++-...-+..-.++.+++ +++..+
T Consensus 314 ~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~ 388 (461)
T KOG3098|consen 314 TVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQ 388 (461)
T ss_pred chhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHH
Confidence 777766666555544433111 0 0 1 1 778888888888888999999 555554
No 223
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=90.44 E-value=1.8 Score=40.54 Aligned_cols=119 Identities=13% Similarity=0.120 Sum_probs=72.1
Q ss_pred HHHHHHHHHHhcccccccccc--------cchHHHHHHHHHHHHHHHHHHHhhcc---------c-hh---h-hHhhhhh
Q 038282 88 ISTFVSLVNIWNCLGRVVSGF--------FRRPLMLTIILLVSWIGHLLIAFNVP---------G-GL---N-IMGFNFG 145 (234)
Q Consensus 88 aa~~~si~~i~~~vGRl~~G~--------~gr~~~l~~~~~~~~i~~~ll~~~~~---------~-~l---~-l~G~~~G 145 (234)
.+...++.++...+.-++.++ ++..+.+.+.+++.+++.+++..... . +. | +.|++.+
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 344455555444444444433 33445566777788887766654321 1 11 3 8899999
Q ss_pred chhhhhHHHHHHhhCCCCCCCC----------C---Cccc----------cc---cccccHHHHH-HHHHHHHHHHHHHH
Q 038282 146 AQWPLVFAITSEFFGPKNHKEP----------E---DDLN----------CI---GVECFKLSFI-MTAATLFSAFVSLI 198 (234)
Q Consensus 146 ~~~~~~p~l~~~~fG~~~~~~~----------g---~g~~----------~d---~~g~Y~~~f~-~a~~~~va~~l~l~ 198 (234)
...+....++.++-..+..++. + +|.. .| ..+.|...|. .+.++++.+++.+.
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888877763 0 1111 11 1235889998 77777666655555
Q ss_pred HHhhhhhh
Q 038282 199 LVLMTRKF 206 (234)
Q Consensus 199 l~~~~~~~ 206 (234)
+.++-+|.
T Consensus 478 ~~~~~~k~ 485 (500)
T PRK09584 478 TAPKLNRM 485 (500)
T ss_pred HHHHHHHH
Confidence 54444444
No 224
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=89.39 E-value=0.012 Score=53.53 Aligned_cols=94 Identities=24% Similarity=0.271 Sum_probs=53.8
Q ss_pred HhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHH---h--hccc---h-h
Q 038282 71 IDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIA---F--NVPG---G-L 137 (234)
Q Consensus 71 ~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~---~--~~~~---~-l 137 (234)
....+.+.++.|.++. -....+.++.+.++.++..+ +|||+.+.....+++++.+.+. . .... . +
T Consensus 273 ~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (451)
T PF00083_consen 273 FYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSIL 350 (451)
T ss_pred cccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3445566667788776 22222344555555555545 8999988887777666554442 1 1111 1 1
Q ss_pred ----h-hHhhhhh-chhhhhHHHHHHhhCCCCCCC
Q 038282 138 ----N-IMGFNFG-AQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 138 ----~-l~G~~~G-~~~~~~p~l~~~~fG~~~~~~ 166 (234)
+ ++.++++ +..++...+++|+|.++..+.
T Consensus 351 ~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~ 385 (451)
T PF00083_consen 351 SIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRST 385 (451)
T ss_pred cceeeeecccccccccccccccccccccccccccc
Confidence 1 3334444 333444477899999888775
No 225
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=88.36 E-value=0.77 Score=43.04 Aligned_cols=114 Identities=21% Similarity=0.183 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHH
Q 038282 52 DMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHL 127 (234)
Q Consensus 52 ~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ 127 (234)
.++.+.+..+--......+..+.+.+.+..|.+... .....+.++.+.++-++..+ +|||..++.+...+.++.+
T Consensus 296 ~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~ 374 (513)
T KOG0254|consen 296 LIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLV 374 (513)
T ss_pred HHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHH
Confidence 343334333333322333557788888888888553 45555666666666666665 8999999988888887776
Q ss_pred HHHhh--c--cc--------hh-h----hHhhhhhchhhhhH-HHHHHhhCCCCCCC
Q 038282 128 LIAFN--V--PG--------GL-N----IMGFNFGAQWPLVF-AITSEFFGPKNHKE 166 (234)
Q Consensus 128 ll~~~--~--~~--------~l-~----l~G~~~G~~~~~~p-~l~~~~fG~~~~~~ 166 (234)
++... . .. .+ . ++-.++...+...| .+.+|.|..+..+.
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~ 431 (513)
T KOG0254|consen 375 ILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSK 431 (513)
T ss_pred HHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhh
Confidence 66431 1 00 01 0 22223333333333 46689999888776
No 226
>PRK09848 glucuronide transporter; Provisional
Probab=87.75 E-value=3.8 Score=37.36 Aligned_cols=36 Identities=22% Similarity=0.280 Sum_probs=31.1
Q ss_pred hHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc
Q 038282 73 NLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF 108 (234)
Q Consensus 73 ~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~ 108 (234)
.+..+.++ .|+++.+++.++++..+.+.+..+++|+
T Consensus 30 ~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~ 66 (448)
T PRK09848 30 FLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGR 66 (448)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhhee
Confidence 34455555 5999999999999999999999999999
No 227
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=87.15 E-value=2.6 Score=39.41 Aligned_cols=29 Identities=17% Similarity=0.360 Sum_probs=25.1
Q ss_pred hCCChhhHHHHHHHHHHhccccccccccc
Q 038282 81 LGYPKRGISTFVSLVNIWNCLGRVVSGFF 109 (234)
Q Consensus 81 ~G~s~~~aa~~~si~~i~~~vGRl~~G~~ 109 (234)
.|.+..+...+..++.++..+|-++.|.+
T Consensus 278 ~~~~~~~~~ifg~vt~~~G~lGvl~Ggii 306 (493)
T KOG1330|consen 278 IGFDHNATLIFGGVTCAGGSLGVLFGGII 306 (493)
T ss_pred hCCccccchhhhhHHHhhchhhheehHHH
Confidence 47888888899999999999999999983
No 228
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=86.15 E-value=5.4 Score=37.22 Aligned_cols=172 Identities=19% Similarity=0.119 Sum_probs=89.1
Q ss_pred CCHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHH
Q 038282 42 YTILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTI 117 (234)
Q Consensus 42 ~~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~ 117 (234)
.+..+.+++|++....+...+..........-+.....+.|.+...... +.+.....+....+. .||+.....
T Consensus 309 ~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~lg~~~~~~~~---~~~~~~~p~~~~~~~~~~~~gR~~~~~~ 385 (521)
T KOG0255|consen 309 ISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSGLGGNIYLNFT---LSGLVELPAYFRNGLLLPEFGRRPPLFL 385 (521)
T ss_pred CchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhhcCchHHHHHH---HHHHHHhhHHHHHHHHHHHhCcHHHHHH
Confidence 4577888887533322222222211111222233334445555443332 222244454554455 789999999
Q ss_pred HHHHHHHHHHHHHh-hcc-c-hh----h-hHhhhhhchhhhhHHHHHHhhCCCCCCCC----------C---Ccc-cccc
Q 038282 118 ILLVSWIGHLLIAF-NVP-G-GL----N-IMGFNFGAQWPLVFAITSEFFGPKNHKEP----------E---DDL-NCIG 175 (234)
Q Consensus 118 ~~~~~~i~~~ll~~-~~~-~-~l----~-l~G~~~G~~~~~~p~l~~~~fG~~~~~~~----------g---~g~-~~d~ 175 (234)
...+.+++++.... ... . .+ . +..++.+..+.+.-...+|++.+...... + +.. .+..
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~ 465 (521)
T KOG0255|consen 386 SLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLL 465 (521)
T ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888777655 222 2 12 1 55666666666667777777776655432 1 111 1111
Q ss_pred ccccHHHH-H-HHHHHHHHHHHH-HHHHhhhhhhhHHHHHHHhh
Q 038282 176 VECFKLSF-I-MTAATLFSAFVS-LILVLMTRKFYKSDIHQRFR 216 (234)
Q Consensus 176 ~g~Y~~~f-~-~a~~~~va~~l~-l~l~~~~~~~~~~~~~~~~~ 216 (234)
..-+...- . .+.+..++.+++ ++++.+..+...+.+.++.|
T Consensus 466 ~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~~~ 509 (521)
T KOG0255|consen 466 RQMFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLDAEN 509 (521)
T ss_pred hhhcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHHHh
Confidence 12122222 2 345555555555 66666666666666666665
No 229
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=85.56 E-value=24 Score=33.08 Aligned_cols=77 Identities=22% Similarity=0.192 Sum_probs=51.1
Q ss_pred HHHHHHHHHHhcccccccccc----c-chHHHHHHHHHHHHHHHHHHHhhccc-h-----hh-hHhhhhhchhhhhHHHH
Q 038282 88 ISTFVSLVNIWNCLGRVVSGF----F-RRPLMLTIILLVSWIGHLLIAFNVPG-G-----LN-IMGFNFGAQWPLVFAIT 155 (234)
Q Consensus 88 aa~~~si~~i~~~vGRl~~G~----~-gr~~~l~~~~~~~~i~~~ll~~~~~~-~-----l~-l~G~~~G~~~~~~p~l~ 155 (234)
.....++..+...+--++.|. - .||+.+.....+..++..++.+..+. . ++ +.-.+++.......+++
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~L 151 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345667777777777777776 3 45555555555555565555553332 1 13 66678888888999999
Q ss_pred HHhhCCCCC
Q 038282 156 SEFFGPKNH 164 (234)
Q Consensus 156 ~~~fG~~~~ 164 (234)
+++-..++.
T Consensus 152 P~la~~~~~ 160 (477)
T PF11700_consen 152 PDLARPEPR 160 (477)
T ss_pred HhhcCCChh
Confidence 999988888
No 230
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=84.79 E-value=13 Score=34.47 Aligned_cols=146 Identities=14% Similarity=0.104 Sum_probs=84.0
Q ss_pred hhHHHHHHh-hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccc-hh---h-hHh
Q 038282 72 DNLRQIGTS-LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPG-GL---N-IMG 141 (234)
Q Consensus 72 ~~~~~~~~~-~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~-~l---~-l~G 141 (234)
..+.+..++ -|.++.+++.+.+....+-.+|...||. +||++...+.+.+.++.-.+-...... ++ + +.|
T Consensus 98 s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~ 177 (528)
T KOG0253|consen 98 SLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWG 177 (528)
T ss_pred HHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHh
Confidence 344444443 4899999999988888888899999998 899998888777766554443332222 22 2 899
Q ss_pred hhhhchhhhhHHHHHHhhCCCCCC-CC--------C------CccccccccccHHHHH-HHHHHHHHHHHHHHHHhh---
Q 038282 142 FNFGAQWPLVFAITSEFFGPKNHK-EP--------E------DDLNCIGVECFKLSFI-MTAATLFSAFVSLILVLM--- 202 (234)
Q Consensus 142 ~~~G~~~~~~p~l~~~~fG~~~~~-~~--------g------~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l~~~--- 202 (234)
++.|+ .+...++-.+.-...+.. .. | -.+.-...-++++-.. +..-..+.+.+..++...
T Consensus 178 ~g~gg-~pv~~~~yle~lp~~~r~~~~V~~~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf 256 (528)
T KOG0253|consen 178 FGVGG-LPVDSAIYLEFLPSSHRWLLTVMSFFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRF 256 (528)
T ss_pred ccCCC-ccHhHHHHHHhccCcCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcch
Confidence 99999 555444433333333322 21 1 1111112236666666 555555555555555321
Q ss_pred -----hhhhhHHHHHHHhhhH
Q 038282 203 -----TRKFYKSDIHQRFREA 218 (234)
Q Consensus 203 -----~~~~~~~~~~~~~~~~ 218 (234)
.+..--|.|+.--|+|
T Consensus 257 ~~~~G~~~kAletL~kiArmN 277 (528)
T KOG0253|consen 257 YLAKGDDYKALETLHKIARMN 277 (528)
T ss_pred hhhcCChHHHHHHHHHHHHhc
Confidence 1222235666666655
No 231
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=83.54 E-value=5.8 Score=36.43 Aligned_cols=90 Identities=20% Similarity=0.145 Sum_probs=62.0
Q ss_pred HHHhhCCChhhHHHHHHHHHHhcccccccccc----c------chHHHHHHHHHHHHHHHHHHHh-----hc-------c
Q 038282 77 IGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----F------RRPLMLTIILLVSWIGHLLIAF-----NV-------P 134 (234)
Q Consensus 77 ~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~------gr~~~l~~~~~~~~i~~~ll~~-----~~-------~ 134 (234)
+..|++++....+.++++--+..- .|+.+|. . .|...+.....++..+..+.+. .. +
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 456788988888888777766544 5999998 1 3334455555554444333322 22 1
Q ss_pred chh--------h-hHhhhhhchhhhhHHHHHHhhCCCCCCCC
Q 038282 135 GGL--------N-IMGFNFGAQWPLVFAITSEFFGPKNHKEP 167 (234)
Q Consensus 135 ~~l--------~-l~G~~~G~~~~~~p~l~~~~fG~~~~~~~ 167 (234)
... | ++|++.+...+..-++++|.-..++.++.
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~ 126 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRV 126 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhh
Confidence 111 2 89999999999999999999999999984
No 232
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=83.33 E-value=5.7 Score=31.50 Aligned_cols=75 Identities=9% Similarity=0.024 Sum_probs=47.1
Q ss_pred HHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHhhccchhh----hHhhhhhchhhhhHHHHHHhhCCCC
Q 038282 89 STFVSLVNIWNCLGRVVSGFFRRPLMLTIILLVSWIGHLLIAFNVPGGLN----IMGFNFGAQWPLVFAITSEFFGPKN 163 (234)
Q Consensus 89 a~~~si~~i~~~vGRl~~G~~gr~~~l~~~~~~~~i~~~ll~~~~~~~l~----l~G~~~G~~~~~~p~l~~~~fG~~~ 163 (234)
+.+-....+.+.++..+...+|.|+.+.++.+...+-......+....++ +.|++.+..|+....++.+.-..++
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~ 122 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEET 122 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHH
Confidence 33344444555444444433899999988777766544444433333333 8999999999999888877654443
No 233
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=82.12 E-value=3.5 Score=37.99 Aligned_cols=134 Identities=12% Similarity=0.038 Sum_probs=70.2
Q ss_pred hhHHHHHHh--hCCChhhHHHHHHHHHH-hcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccch-h-h---h
Q 038282 72 DNLRQIGTS--LGYPKRGISTFVSLVNI-WNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGG-L-N---I 139 (234)
Q Consensus 72 ~~~~~~~~~--~G~s~~~aa~~~si~~i-~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~-l-~---l 139 (234)
.++.++..+ +|+++.+...-+--... ...+.-+.... ++-|.++++..+...+...++.+..+.. + . .
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~ 103 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFF 103 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHH
Confidence 466777654 68887765422111111 11111111111 4556666665555555555555544322 1 1 5
Q ss_pred HhhhhhchhhhhHHHHHHhhCCCCCCCC----------C------Ccc--ccccccccHHHHH-HHHHHHHHHHHHHHHH
Q 038282 140 MGFNFGAQWPLVFAITSEFFGPKNHKEP----------E------DDL--NCIGVECFKLSFI-MTAATLFSAFVSLILV 200 (234)
Q Consensus 140 ~G~~~G~~~~~~p~l~~~~fG~~~~~~~----------g------~g~--~~d~~g~Y~~~f~-~a~~~~va~~l~l~l~ 200 (234)
+|++.....+-. +++=..-.++|+.+. | -|. +.....+|....+ ..+...++.++.++++
T Consensus 104 yg~~~a~evay~-sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP 182 (412)
T PF01770_consen 104 YGLATAAEVAYY-SYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLP 182 (412)
T ss_pred HHHHHHHHHHHH-HHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 555555533322 232222355666542 1 121 2224678999988 8888888888888888
Q ss_pred hhhhhh
Q 038282 201 LMTRKF 206 (234)
Q Consensus 201 ~~~~~~ 206 (234)
.+++..
T Consensus 183 ~~~~S~ 188 (412)
T PF01770_consen 183 MPKRSL 188 (412)
T ss_pred CCCccc
Confidence 765433
No 234
>PRK11462 putative transporter; Provisional
Probab=81.38 E-value=16 Score=33.85 Aligned_cols=87 Identities=9% Similarity=0.005 Sum_probs=56.4
Q ss_pred hHHHHH-HhhCCChhhHHHHHHHHHHhcccccccccc--------cchH-HHHHHHHHHHHHHHHHHHhhcc---c--hh
Q 038282 73 NLRQIG-TSLGYPKRGISTFVSLVNIWNCLGRVVSGF--------FRRP-LMLTIILLVSWIGHLLIAFNVP---G--GL 137 (234)
Q Consensus 73 ~~~~~~-~~~G~s~~~aa~~~si~~i~~~vGRl~~G~--------~gr~-~~l~~~~~~~~i~~~ll~~~~~---~--~l 137 (234)
++..+- ...|+++..++.++.+.-+.+++.-++.|+ .||+ .+++...+..+++..+++.... . ..
T Consensus 31 ~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~ 110 (460)
T PRK11462 31 YMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMI 110 (460)
T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 344444 446999999999999999999999999998 5665 4555566667766666654221 1 12
Q ss_pred h------hHhhhhhchhhhhHHHHHHhh
Q 038282 138 N------IMGFNFGAQWPLVFAITSEFF 159 (234)
Q Consensus 138 ~------l~G~~~G~~~~~~p~l~~~~f 159 (234)
| ++.+++-..-.-.-++.+++-
T Consensus 111 y~~~~~~~~~~~~t~~~ipy~al~~~lt 138 (460)
T PRK11462 111 YAAITYTLLTLLYTVVNIPYCALGGVIT 138 (460)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHhc
Confidence 2 445555555544445555554
No 235
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=79.16 E-value=3.6 Score=38.08 Aligned_cols=80 Identities=13% Similarity=0.051 Sum_probs=54.9
Q ss_pred HHHHHHHHHHhcccccccccc-----cchHHHHHHHHHHHHHHHHHHHhhcc--chh-----h-hHhhhhhchhhhhHHH
Q 038282 88 ISTFVSLVNIWNCLGRVVSGF-----FRRPLMLTIILLVSWIGHLLIAFNVP--GGL-----N-IMGFNFGAQWPLVFAI 154 (234)
Q Consensus 88 aa~~~si~~i~~~vGRl~~G~-----~gr~~~l~~~~~~~~i~~~ll~~~~~--~~l-----~-l~G~~~G~~~~~~p~l 154 (234)
.+...++.++...+-.++.|. -.||+.+.....+..+..+++++..+ ..+ | +...++....+..-++
T Consensus 60 ~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~ 139 (438)
T COG2270 60 WGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSM 139 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhH
Confidence 345556666666655566665 35666666666666666666666433 221 2 7788888888889999
Q ss_pred HHHhhCCCCCCCC
Q 038282 155 TSEFFGPKNHKEP 167 (234)
Q Consensus 155 ~~~~fG~~~~~~~ 167 (234)
.+++...++.+++
T Consensus 140 L~~~~~k~~~~ri 152 (438)
T COG2270 140 LPRLTTKDNMGRI 152 (438)
T ss_pred hhhhcCccccCcc
Confidence 9999999999886
No 236
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=76.13 E-value=39 Score=27.15 Aligned_cols=89 Identities=25% Similarity=0.323 Sum_probs=60.0
Q ss_pred hHHHHHHhhCCCh--hhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhcc--ch-hh----h
Q 038282 73 NLRQIGTSLGYPK--RGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVP--GG-LN----I 139 (234)
Q Consensus 73 ~~~~~~~~~G~s~--~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~--~~-l~----l 139 (234)
..+.+..+.+.+. ...+...+...+...++.+++|. .|||+.+........++.++...... .. +. .
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (338)
T COG0477 24 ALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLL 103 (338)
T ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHH
Confidence 4555556665555 46788888888888888899998 37776666655543444333333222 11 11 5
Q ss_pred HhhhhhchhhhhHHHHHHhhCC
Q 038282 140 MGFNFGAQWPLVFAITSEFFGP 161 (234)
Q Consensus 140 ~G~~~G~~~~~~p~l~~~~fG~ 161 (234)
.|++.|...+...+++.+.+..
T Consensus 104 ~g~~~~~~~~~~~~~~~~~~~~ 125 (338)
T COG0477 104 QGLGGGGLLPVASALLSEWFPE 125 (338)
T ss_pred HHhhhHHHHHHHHHHHHHhcCc
Confidence 7889998999999999999887
No 237
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=75.77 E-value=33 Score=31.83 Aligned_cols=114 Identities=17% Similarity=0.100 Sum_probs=66.5
Q ss_pred HHHHHHHHHHhcccccccccc----cchH-----HHH--HHHHHHHHHHHHHHHh---------hccch-h---h-hHhh
Q 038282 88 ISTFVSLVNIWNCLGRVVSGF----FRRP-----LML--TIILLVSWIGHLLIAF---------NVPGG-L---N-IMGF 142 (234)
Q Consensus 88 aa~~~si~~i~~~vGRl~~G~----~gr~-----~~l--~~~~~~~~i~~~ll~~---------~~~~~-l---~-l~G~ 142 (234)
.+.+.++-++.-++..++..+ ..|| ... .+..++.+++...+.. ..+.. + + +.++
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 567777777666666555442 3332 222 4455555555544432 11111 1 2 8999
Q ss_pred hhhchhhhhHHHHHHhhCCCCCCCC----------C---C----ccccccccccHHHHH-HHHHHHHHHHHHHHHHhh
Q 038282 143 NFGAQWPLVFAITSEFFGPKNHKEP----------E---D----DLNCIGVECFKLSFI-MTAATLFSAFVSLILVLM 202 (234)
Q Consensus 143 ~~G~~~~~~p~l~~~~fG~~~~~~~----------g---~----g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l~~~ 202 (234)
+.....+....++.+.-..+..+++ | + .... ..+++...|. .+.++++..++.+.+.++
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGA-VPQGVTGVFGKIGLVTLLVGVVMALMVPW 470 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988888864 1 1 1111 2235666666 666666665555554443
No 238
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=73.64 E-value=8.3 Score=34.40 Aligned_cols=86 Identities=15% Similarity=0.203 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHHhh-cc--c------h-hh----hHhhhhhchhhhhHHHHHHhhCCCCCCCC-----------
Q 038282 113 LMLTIILLVSWIGHLLIAFN-VP--G------G-LN----IMGFNFGAQWPLVFAITSEFFGPKNHKEP----------- 167 (234)
Q Consensus 113 ~~l~~~~~~~~i~~~ll~~~-~~--~------~-l~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~~----------- 167 (234)
+++.++.++..+|++++... .+ . . +| ++++|.|+.=+..+++.+|-|..++-.+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56777888888888775442 11 1 1 23 88999999999999999999997752220
Q ss_pred --C-------CccccccccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 168 --E-------DDLNCIGVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 168 --g-------~g~~~d~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
| .+++ ....+|...|. .++..+++.+..+.-
T Consensus 82 n~G~~~~~~~~~~i-~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYI-QQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHH-HHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhh-ccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 1 3333 24578999998 777777666655443
No 239
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=72.64 E-value=1.1 Score=42.78 Aligned_cols=130 Identities=17% Similarity=0.180 Sum_probs=2.4
Q ss_pred hHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhc---c-----------
Q 038282 73 NLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNV---P----------- 134 (234)
Q Consensus 73 ~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~---~----------- 134 (234)
.++++-+..++++.+.+.+.+..-+++.+.-++..+ -.|.+++....++++++.+++..+. +
T Consensus 25 ~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~ 104 (539)
T PF03137_consen 25 SLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSN 104 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccc
Confidence 455555556999999999999999999998888777 4667788888888888776664321 0
Q ss_pred -----------------------------c---h--hh-------hHhhhhhchhhhhHHHHHHhhCCCCCCCC------
Q 038282 135 -----------------------------G---G--LN-------IMGFNFGAQWPLVFAITSEFFGPKNHKEP------ 167 (234)
Q Consensus 135 -----------------------------~---~--l~-------l~G~~~G~~~~~~p~l~~~~fG~~~~~~~------ 167 (234)
. . .+ +.|+|....+++-.+++=|.-.+++.+-+
T Consensus 105 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~ 184 (539)
T PF03137_consen 105 GNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYA 184 (539)
T ss_dssp -----------------------------------------------SSS------------------------------
T ss_pred cccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhH
Confidence 0 0 00 67777777888877777777666666532
Q ss_pred --------C---Cc--------cccc-------------cccccHHHHH-HHHHHHHHHHHHHHHHhh
Q 038282 168 --------E---DD--------LNCI-------------GVECFKLSFI-MTAATLFSAFVSLILVLM 202 (234)
Q Consensus 168 --------g---~g--------~~~d-------------~~g~Y~~~f~-~a~~~~va~~l~l~l~~~ 202 (234)
| ++ +..+ .-|.|..-|+ .+.+.++.++..+..+++
T Consensus 185 ~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~ 252 (539)
T PF03137_consen 185 MSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKK 252 (539)
T ss_dssp --------------------------------------------------------------------
T ss_pred HhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 0 11 0000 1367888888 888888888777777654
No 240
>PRK03612 spermidine synthase; Provisional
Probab=70.33 E-value=68 Score=30.48 Aligned_cols=30 Identities=23% Similarity=0.311 Sum_probs=23.1
Q ss_pred hhCCChhhHHHHHHHHHHhccccccccccc
Q 038282 80 SLGYPKRGISTFVSLVNIWNCLGRVVSGFF 109 (234)
Q Consensus 80 ~~G~s~~~aa~~~si~~i~~~vGRl~~G~~ 109 (234)
-.|.+....+.+++++-++-.+|-.+.|++
T Consensus 44 ~~G~s~~~~~~ii~~fl~glalGs~l~~~~ 73 (521)
T PRK03612 44 LLGDSVTQFSTVIGLMLFAMGVGALLSKYL 73 (521)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 458888888888888888778877777763
No 241
>COG3114 CcmD Heme exporter protein D [Intracellular trafficking and secretion]
Probab=67.88 E-value=25 Score=23.60 Aligned_cols=48 Identities=21% Similarity=0.238 Sum_probs=23.7
Q ss_pred cccHHHHH-HHHHHHHHHHHHHHHHh-hhhhhhHHHHHHHhhhHHhhccc
Q 038282 177 ECFKLSFI-MTAATLFSAFVSLILVL-MTRKFYKSDIHQRFREAAAKSAA 224 (234)
Q Consensus 177 g~Y~~~f~-~a~~~~va~~l~l~l~~-~~~~~~~~~~~~~~~~~~~~~~~ 224 (234)
|+|-.--+ +-++.++..++.+.-.. .+|+..++...++.||.+.+.+.
T Consensus 13 GgyafyVWlA~~~tll~l~~l~v~sv~qrr~iL~~v~r~~aReaR~~~aq 62 (67)
T COG3114 13 GGYAFYVWLAVGMTLLPLAVLVVHSVLQRRAILRGVARQRAREARLRAAQ 62 (67)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55533223 33444444433333222 35666666667777777555443
No 242
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=67.20 E-value=74 Score=30.29 Aligned_cols=28 Identities=4% Similarity=-0.110 Sum_probs=23.1
Q ss_pred hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 139 IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 139 l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
+++..+....++...-+++.-..+.++-
T Consensus 362 lf~~~y~flitia~~~iA~~L~~~~~aL 389 (511)
T TIGR00806 362 LFRGIYQFLVPIATFQIASSLSKELCAL 389 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccceEE
Confidence 8888888888888888888877777763
No 243
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=65.43 E-value=42 Score=30.88 Aligned_cols=127 Identities=16% Similarity=0.138 Sum_probs=74.5
Q ss_pred HHHHHH-hhCCChhhHHHHHHHHHHhcccccccccc---------cchHHHHHHHHHHHHHHHHHHHh-hc---cchh--
Q 038282 74 LRQIGT-SLGYPKRGISTFVSLVNIWNCLGRVVSGF---------FRRPLMLTIILLVSWIGHLLIAF-NV---PGGL-- 137 (234)
Q Consensus 74 ~~~~~~-~~G~s~~~aa~~~si~~i~~~vGRl~~G~---------~gr~~~l~~~~~~~~i~~~ll~~-~~---~~~l-- 137 (234)
..++.+ ++|.++.+.+...++.++- ...++++|. +.||..+.++.++..++.+.+.. +. +...
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lP-w~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~ 90 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLP-WSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAV 90 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCc-hHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHH
Confidence 334455 4799999988877777653 355777887 34666677777666555544433 22 1111
Q ss_pred h---hHhhhhhchhhhhHHHHHHhhCCCCCCC--C-----------------CCccccccccccHHHHH-HHHHHHHHHH
Q 038282 138 N---IMGFNFGAQWPLVFAITSEFFGPKNHKE--P-----------------EDDLNCIGVECFKLSFI-MTAATLFSAF 194 (234)
Q Consensus 138 ~---l~G~~~G~~~~~~p~l~~~~fG~~~~~~--~-----------------g~g~~~d~~g~Y~~~f~-~a~~~~va~~ 194 (234)
. +..+++...-.+.-+++.|.--.+...+ . -.|...+ ..+++..|. .+.+..+..+
T Consensus 91 ~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~-~~~~~~~f~i~~~~~~l~~~ 169 (433)
T PF03092_consen 91 VLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLD-SFGPQGVFLISAALPLLMLI 169 (433)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh-cCCCeEEehHHHHHHHHHHH
Confidence 1 5555555555666667777764333331 1 1444333 356778887 7777777766
Q ss_pred HHHHHHhh
Q 038282 195 VSLILVLM 202 (234)
Q Consensus 195 l~l~l~~~ 202 (234)
..+.+..+
T Consensus 170 ~~~~~~~e 177 (433)
T PF03092_consen 170 VALFLLEE 177 (433)
T ss_pred HHHHhhhh
Confidence 66665543
No 244
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=64.17 E-value=90 Score=29.39 Aligned_cols=83 Identities=16% Similarity=0.124 Sum_probs=52.6
Q ss_pred HHHHhhCCChhhHHHHHHHHHHhcccccccccc--------cchHH-HHHHHHHHHHHHHHHHHhhcc----c-hh----
Q 038282 76 QIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF--------FRRPL-MLTIILLVSWIGHLLIAFNVP----G-GL---- 137 (234)
Q Consensus 76 ~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~--------~gr~~-~l~~~~~~~~i~~~ll~~~~~----~-~l---- 137 (234)
.+....|+|+..++.++.+.-+.+++.-++.|+ .||++ +++...+..++...+++.+.+ . ..
T Consensus 38 fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~v 117 (467)
T COG2211 38 FYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALV 117 (467)
T ss_pred HHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHH
Confidence 344557999999999999999999999999999 45544 444454555555444444321 1 12
Q ss_pred -h-hHhhhhhchhhhhHHHHHHh
Q 038282 138 -N-IMGFNFGAQWPLVFAITSEF 158 (234)
Q Consensus 138 -~-l~G~~~G~~~~~~p~l~~~~ 158 (234)
| +.++++-.+-.-.-++.+++
T Consensus 118 tY~l~~l~YT~vniPy~al~~~i 140 (467)
T COG2211 118 TYMLLGLGYTLVNIPYGALGPEI 140 (467)
T ss_pred HHHHHHHHHHheeCchhhcchhh
Confidence 2 66666665544333444433
No 245
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=61.73 E-value=12 Score=33.35 Aligned_cols=85 Identities=14% Similarity=0.095 Sum_probs=51.5
Q ss_pred hhCCChhhHHHHHHHHHHhcccccccccc-cchHH----HHHHHHHHHHHHHHHHHhhc---cchh--h---hHhhhhhc
Q 038282 80 SLGYPKRGISTFVSLVNIWNCLGRVVSGF-FRRPL----MLTIILLVSWIGHLLIAFNV---PGGL--N---IMGFNFGA 146 (234)
Q Consensus 80 ~~G~s~~~aa~~~si~~i~~~vGRl~~G~-~gr~~----~l~~~~~~~~i~~~ll~~~~---~~~l--~---l~G~~~G~ 146 (234)
+..+...+...+-|+.+.=|++-.++.|| ++|+. ..++.+....++.+++.... ..+. . ++|++.=.
T Consensus 73 d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgES 152 (459)
T KOG4686|consen 73 DSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGES 152 (459)
T ss_pred ccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchh
Confidence 44666667788999999999999999999 55543 33444444455665554321 1111 1 56665555
Q ss_pred hhhhhHHHHHHhhCCCCC
Q 038282 147 QWPLVFAITSEFFGPKNH 164 (234)
Q Consensus 147 ~~~~~p~l~~~~fG~~~~ 164 (234)
.......+....|.-|..
T Consensus 153 lAVaQN~yav~wFKGKEL 170 (459)
T KOG4686|consen 153 LAVAQNKYAVYWFKGKEL 170 (459)
T ss_pred hhhhhcceeEEEecCccc
Confidence 555555555555554444
No 246
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=59.35 E-value=47 Score=30.83 Aligned_cols=77 Identities=17% Similarity=0.027 Sum_probs=50.7
Q ss_pred HHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHH
Q 038282 45 LQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILL 120 (234)
Q Consensus 45 ~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~ 120 (234)
+.-+++|.|..-+...++... .+.+-..+..++.+.|+++.+.+.+=++-+++...|-++..+ +|..+.=..++.
T Consensus 253 ~~Y~~q~vflas~alalLY~T-VLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~ 331 (432)
T PF06963_consen 253 RTYFRQPVFLASFALALLYFT-VLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLW 331 (432)
T ss_pred HHHHhCHHHHHHHHHHHHHHH-HhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHH
Confidence 445666666543333333332 233445788899999999999999888888888888888888 454444444444
Q ss_pred HH
Q 038282 121 VS 122 (234)
Q Consensus 121 ~~ 122 (234)
.+
T Consensus 332 ~q 333 (432)
T PF06963_consen 332 WQ 333 (432)
T ss_pred HH
Confidence 43
No 247
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=58.26 E-value=1.3e+02 Score=27.92 Aligned_cols=122 Identities=10% Similarity=0.050 Sum_probs=53.5
Q ss_pred HHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhh---CCChhhHHHHHHHHHHhccccccccccc----ch--HHH
Q 038282 44 ILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSL---GYPKRGISTFVSLVNIWNCLGRVVSGFF----RR--PLM 114 (234)
Q Consensus 44 ~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~---G~s~~~aa~~~si~~i~~~vGRl~~G~~----gr--~~~ 114 (234)
+++..++|.....-++..+...+..-+.++...+-++. ......-+.+-++..+.++++-+..|.+ ++ ...
T Consensus 240 ~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~ 319 (412)
T PF01770_consen 240 FKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELA 319 (412)
T ss_pred HHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHH
Confidence 34566777654433333333333333444444444444 2222222334444444445555556652 22 122
Q ss_pred HHHHHHHHHHHHHHHHhhccchh-h----hHhhhhhchhhhhHHHHHHhhCCCCCC
Q 038282 115 LTIILLVSWIGHLLIAFNVPGGL-N----IMGFNFGAQWPLVFAITSEFFGPKNHK 165 (234)
Q Consensus 115 l~~~~~~~~i~~~ll~~~~~~~l-~----l~G~~~G~~~~~~p~l~~~~fG~~~~~ 165 (234)
+....++.+..++++......++ | +++..+-...++...-+++-.-.+.++
T Consensus 320 l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~ya 375 (412)
T PF01770_consen 320 LGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYA 375 (412)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccee
Confidence 23333334434444433222222 3 566666555555555555544444444
No 248
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=57.59 E-value=1.7e+02 Score=27.59 Aligned_cols=114 Identities=13% Similarity=0.045 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHhhhhH-HhHH--hhHHHHHHhh-CCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHH
Q 038282 52 DMLILFLATICGVGGT-LLAI--DNLRQIGTSL-GYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSW 123 (234)
Q Consensus 52 ~F~~l~~~~~~~~~~~-~~~~--~~~~~~~~~~-G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~ 123 (234)
+=|.+++++-+..... .--+ .-+..+.++. | +...+.++..++.+..+.-.+..=| .|-|....++....+
T Consensus 42 rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~ 120 (480)
T KOG2563|consen 42 RRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNG 120 (480)
T ss_pred hHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHH
Confidence 3366555554433222 1111 1233344443 6 5555666666777777665555556 455556666666666
Q ss_pred HHHHHHHhhccc---hh------h----hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 124 IGHLLIAFNVPG---GL------N----IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 124 i~~~ll~~~~~~---~l------~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
++.++=..+... .. + +.+.+.=....+-+=+..-.|+.++...
T Consensus 121 iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~ 176 (480)
T KOG2563|consen 121 IGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAI 176 (480)
T ss_pred HHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhh
Confidence 666554433221 11 1 2222222222222334456789988875
No 249
>PF06305 DUF1049: Protein of unknown function (DUF1049); InterPro: IPR010445 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=54.94 E-value=42 Score=22.05 Aligned_cols=16 Identities=25% Similarity=0.391 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHHH
Q 038282 185 MTAATLFSAFVSLILV 200 (234)
Q Consensus 185 ~a~~~~va~~l~l~l~ 200 (234)
..++.++|+++.+++.
T Consensus 24 il~~f~~G~llg~l~~ 39 (68)
T PF06305_consen 24 ILIAFLLGALLGWLLS 39 (68)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5555555555555443
No 250
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=54.35 E-value=1.1e+02 Score=28.63 Aligned_cols=67 Identities=12% Similarity=-0.033 Sum_probs=41.9
Q ss_pred hHhhhhhchhhhhHHHHHHhhCCCCCCCC----------C---Cccc----------ccc---ccccHHHHH-HHHHHHH
Q 038282 139 IMGFNFGAQWPLVFAITSEFFGPKNHKEP----------E---DDLN----------CIG---VECFKLSFI-MTAATLF 191 (234)
Q Consensus 139 l~G~~~G~~~~~~p~l~~~~fG~~~~~~~----------g---~g~~----------~d~---~g~Y~~~f~-~a~~~~v 191 (234)
+.|++.+...+.-...+.+.-..+..+.. | ++.+ .|- ...|...|. .++.+++
T Consensus 388 l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 467 (489)
T PRK10207 388 FQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLG 467 (489)
T ss_pred HHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHH
Confidence 88999999888888888887777766642 1 1111 011 124778887 7777777
Q ss_pred HHHHHHHHHhhhhh
Q 038282 192 SAFVSLILVLMTRK 205 (234)
Q Consensus 192 a~~l~l~l~~~~~~ 205 (234)
..++.+.+.++-+|
T Consensus 468 ~~v~~~~~~~~~~~ 481 (489)
T PRK10207 468 VAVVMALMVPWLNR 481 (489)
T ss_pred HHHHHHHHHHHHHH
Confidence 66666555443333
No 251
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=49.31 E-value=16 Score=35.19 Aligned_cols=62 Identities=23% Similarity=0.289 Sum_probs=46.7
Q ss_pred HHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc----c-chHHHHHHHHHHHHHHHHHHHh
Q 038282 70 AIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF----F-RRPLMLTIILLVSWIGHLLIAF 131 (234)
Q Consensus 70 ~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~----~-gr~~~l~~~~~~~~i~~~ll~~ 131 (234)
+...++.+...+|+++.+.+++....-+....+.++||. + .+|..++..++....+.+++.+
T Consensus 30 l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~f 96 (618)
T KOG3762|consen 30 LFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLVF 96 (618)
T ss_pred cchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHheee
Confidence 446788889999999999999999999999999999998 3 3344455555555444444443
No 252
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=46.08 E-value=53 Score=30.46 Aligned_cols=22 Identities=23% Similarity=0.280 Sum_probs=19.2
Q ss_pred hHHHHHHHHHHhcccccccccc
Q 038282 87 GISTFVSLVNIWNCLGRVVSGF 108 (234)
Q Consensus 87 ~aa~~~si~~i~~~vGRl~~G~ 108 (234)
....+..++++++.+||.+..|
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~ 329 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSK 329 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhhe
Confidence 5568888999999999998887
No 253
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=45.06 E-value=61 Score=30.36 Aligned_cols=87 Identities=21% Similarity=0.327 Sum_probs=72.2
Q ss_pred hCCChhhHHHHHHHHHHhcccccccccc-----cchHHHHHHHHHHHHHHHHHHHhhccchh-h---hHhhhhhchhhhh
Q 038282 81 LGYPKRGISTFVSLVNIWNCLGRVVSGF-----FRRPLMLTIILLVSWIGHLLIAFNVPGGL-N---IMGFNFGAQWPLV 151 (234)
Q Consensus 81 ~G~s~~~aa~~~si~~i~~~vGRl~~G~-----~gr~~~l~~~~~~~~i~~~ll~~~~~~~l-~---l~G~~~G~~~~~~ 151 (234)
.|+++.+.+.+.+..++.+.++.++... ++-++.+.+++....+..+...++...+. | ++....+...+.+
T Consensus 272 f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~~~~pa~ 351 (463)
T KOG2816|consen 272 FGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAGIVFPAI 351 (463)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhcchhHHH
Confidence 4999999999999999999999998885 57777777888888888777777665553 4 7788888888888
Q ss_pred HHHHHHhhCCCCCCCC
Q 038282 152 FAITSEFFGPKNHKEP 167 (234)
Q Consensus 152 p~l~~~~fG~~~~~~~ 167 (234)
-+.++.+-+.++.|..
T Consensus 352 ~s~~s~~v~~~e~g~v 367 (463)
T KOG2816|consen 352 RAFASILVSPEEQGKV 367 (463)
T ss_pred HhHHHhhcccccccch
Confidence 9999999999999874
No 254
>TIGR00985 3a0801s04tom mitochondrial import receptor subunit translocase of outer membrane 20 kDa subunit.
Probab=43.22 E-value=51 Score=26.02 Aligned_cols=20 Identities=10% Similarity=0.175 Sum_probs=14.4
Q ss_pred HhhhhhhhHHHHHHHhhhHH
Q 038282 200 VLMTRKFYKSDIHQRFREAA 219 (234)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~ 219 (234)
.+|..+.|+..+++++|..+
T Consensus 30 KRR~dPdFRkkLr~rr~k~~ 49 (148)
T TIGR00985 30 KRRNDPDFRKKLRRRRKKQA 49 (148)
T ss_pred hhccCHHHHHHHHHHHHHHH
Confidence 44578888888888777443
No 255
>TIGR03141 cytochro_ccmD heme exporter protein CcmD. The model for this protein family describes a small, hydrophobic, and only moderately well-conserved protein, tricky to identify accurately for all of these reasons. However, members are found as part of large operons involved in heme export across the inner membrane for assembly of c-type cytochromes in a large number of bacteria. The gray zone between the trusted cutoff (13.0) and noise cutoff (4.75) includes both low-scoring examples and false-positive matches to hydrophobic domains of longer proteins.
Probab=40.67 E-value=86 Score=19.21 Aligned_cols=8 Identities=0% Similarity=-0.130 Sum_probs=3.6
Q ss_pred cccHHHHH
Q 038282 177 ECFKLSFI 184 (234)
Q Consensus 177 g~Y~~~f~ 184 (234)
+.|.+.=|
T Consensus 5 ~~yVW~sY 12 (45)
T TIGR03141 5 AFYVWLAY 12 (45)
T ss_pred cHHHHHHH
Confidence 34444444
No 256
>PF15086 UPF0542: Uncharacterised protein family UPF0542
Probab=39.25 E-value=1e+02 Score=21.28 Aligned_cols=38 Identities=18% Similarity=0.161 Sum_probs=23.8
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhhh
Q 038282 180 KLSFI-MTAATLFSAFVSLILVLMTRKFYKSDIHQRFRE 217 (234)
Q Consensus 180 ~~~f~-~a~~~~va~~l~l~l~~~~~~~~~~~~~~~~~~ 217 (234)
...++ ...+.++++++++-+.+.-++..+|-...++|.
T Consensus 24 ~~vll~LtPlfiisa~lSwkLaK~ie~~ere~K~k~Kr~ 62 (74)
T PF15086_consen 24 TTVLLILTPLFIISAVLSWKLAKAIEKEEREKKKKAKRQ 62 (74)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445 788888888888888766544444444444443
No 257
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=37.67 E-value=2.3e+02 Score=24.64 Aligned_cols=78 Identities=12% Similarity=0.014 Sum_probs=41.5
Q ss_pred CCCCHHHHhccHHHHHHHHHHHHhhhhHHhHH--hhHHHHHHhh--CC----Ch----hhHHHHHHHHHHhccccccccc
Q 038282 40 EDYTILQALFSMDMLILFLATICGVGGTLLAI--DNLRQIGTSL--GY----PK----RGISTFVSLVNIWNCLGRVVSG 107 (234)
Q Consensus 40 ~~~~~~~~lk~~~F~~l~~~~~~~~~~~~~~~--~~~~~~~~~~--G~----s~----~~aa~~~si~~i~~~vGRl~~G 107 (234)
++.+..+.+|+++-|...+.+.+.......+. .......... +. +. .......-++-.+-.+|.+..|
T Consensus 83 ~~~s~~~~LK~K~tw~w~~~Yg~wLv~~V~p~t~~~~~~~~~~s~~ni~~~~~~~~~~~~~~~~~I~fv~g~~~G~~~ig 162 (267)
T PF07672_consen 83 KKPSYKSILKEKETWKWILIYGIWLVVVVFPFTPSWFNILIWISPANIKSVVSGGGFNWIIPIFQILFVAGYFLGPFTIG 162 (267)
T ss_pred ccchHHHHHccchHHHHHHHHHHHheeEEEeccchhHhHhhhcCcccccccccccccchhhHHHHHHHHHHHhhhceeec
Confidence 45688999999999986666544433322221 1111111111 11 11 1223334444455567888888
Q ss_pred c-----cchHHHHHH
Q 038282 108 F-----FRRPLMLTI 117 (234)
Q Consensus 108 ~-----~gr~~~l~~ 117 (234)
. +.||+.+..
T Consensus 163 ~~nkt~~kRk~fi~~ 177 (267)
T PF07672_consen 163 LWNKTNYKRKPFIHF 177 (267)
T ss_pred cchhhhhhhhhHHHH
Confidence 6 788887653
No 258
>PF00558 Vpu: Vpu protein; InterPro: IPR008187 The Human immunodeficiency virus 1 (HIV-1) Vpu protein acts in the degradation of CD4 in the endoplasmic reticulum and in the enhancement of virion release from the plasma membrane of infected cells [].; GO: 0019076 release of virus from host; PDB: 2JPX_A 1PI8_A 2GOH_A 2GOF_A 1PI7_A 1PJE_A 1VPU_A 2K7Y_A.
Probab=37.32 E-value=43 Score=23.60 Aligned_cols=22 Identities=32% Similarity=0.521 Sum_probs=12.1
Q ss_pred HHHHHhhhHHhhccc-cchhhhh
Q 038282 210 DIHQRFREAAAKSAA-DKGEMEQ 231 (234)
Q Consensus 210 ~~~~~~~~~~~~~~~-~~~~~~~ 231 (234)
.+-+|=|+.++||-. .|||.|+
T Consensus 41 ~li~RIreraEDSGnES~Gd~Ee 63 (81)
T PF00558_consen 41 RLIERIRERAEDSGNESDGDEEE 63 (81)
T ss_dssp HHHHHHHCTTTCCHCTTTTCCHH
T ss_pred HHHHHHHcccccCCCCCCCcHHH
Confidence 344566666776643 3455554
No 259
>PF02064 MAS20: MAS20 protein import receptor; InterPro: IPR002056 Virtually all mitochondrial precursors are imported via the same mechanism []: precursors first bind to receptors on the mitochondrial surface, then insert into the translocation channel in the outer membrane. Many outer-membrane proteins participate in the early stages of import, four of which (MAS20, MAS22, MAS37 and MAS70) are components of the receptor. MAS20, which forms a subcomplex with MAS22, seems to interact with most or all mitochondrial precursors, suggesting that the protein binds directly to mitochondrial targeting sequences. The MAS37 and MAS70 components also form a subcomplex, the two subcomplexes possibly binding via their trans- membrane (TM) regions - the TM region of MAS70 promotes oligomerisation of attatched protein domains and shares sequence similarity with the TM region of MAS20 []. MAS20 is also known as TOM20.; GO: 0006605 protein targeting, 0006886 intracellular protein transport, 0005742 mitochondrial outer membrane translocase complex; PDB: 3AX3_A 3AWR_B 2V1S_A 3AX5_C 3AX2_C 1OM2_A 2V1T_B.
Probab=37.29 E-value=11 Score=28.72 Aligned_cols=21 Identities=10% Similarity=0.180 Sum_probs=0.0
Q ss_pred HhhhhhhhHHHHHHHhhhHHh
Q 038282 200 VLMTRKFYKSDIHQRFREAAA 220 (234)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~ 220 (234)
.+|..+.|+.-|++++|..++
T Consensus 20 KRR~dP~frkkL~~rrk~~~~ 40 (121)
T PF02064_consen 20 KRRSDPDFRKKLRERRKKQAK 40 (121)
T ss_dssp ---------------------
T ss_pred ccccChHHHHHHHHHHHHHHH
Confidence 445788888888877665543
No 260
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=36.20 E-value=57 Score=30.79 Aligned_cols=61 Identities=20% Similarity=0.173 Sum_probs=45.7
Q ss_pred HhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc--------cchHHHHHH-HHHHHHHHHHHHHh
Q 038282 71 IDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF--------FRRPLMLTI-ILLVSWIGHLLIAF 131 (234)
Q Consensus 71 ~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~--------~gr~~~l~~-~~~~~~i~~~ll~~ 131 (234)
...++|+.++.|++....+..+-.--+...+-.++.|. +|||+-.+. ......+++.++.+
T Consensus 52 lsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~ 121 (498)
T KOG0637|consen 52 LSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGY 121 (498)
T ss_pred hccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhh
Confidence 35789999999999999988887777888888888887 787775554 33344556665544
No 261
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=35.82 E-value=83 Score=28.91 Aligned_cols=84 Identities=11% Similarity=0.072 Sum_probs=45.9
Q ss_pred CChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHH-Hhh--------ccchhh------hHhhh
Q 038282 83 YPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLI-AFN--------VPGGLN------IMGFN 143 (234)
Q Consensus 83 ~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll-~~~--------~~~~l~------l~G~~ 143 (234)
+++...+.+-.+.+++..+|-.+... .+-|+++....++.++..+.- ... .+..+| +..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 77777776666666777777666655 233444444444433322111 110 011122 55666
Q ss_pred hhchhhhhHHHHHHhhCCCCCCC
Q 038282 144 FGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 144 ~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
.+..+-..-.+++++.....-++
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt 354 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGT 354 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHH
Confidence 66666666677888888776664
No 262
>PF04995 CcmD: Heme exporter protein D (CcmD); InterPro: IPR007078 The CcmD protein is part of a C-type cytochrome biogenesis operon []. The exact function of this protein is uncertain. It has been proposed that CcmC, CcmD and CcmE interact directly with each other, establishing a cytoplasm to periplasm haem delivery pathway for cytochrome c maturation []. This protein is found fused to CcmE in P52224 from SWISSPROT. These proteins contain a predicted transmembrane helix.; GO: 0006810 transport, 0016021 integral to membrane
Probab=34.29 E-value=1.1e+02 Score=18.72 Aligned_cols=7 Identities=14% Similarity=0.031 Sum_probs=3.1
Q ss_pred ccHHHHH
Q 038282 178 CFKLSFI 184 (234)
Q Consensus 178 ~Y~~~f~ 184 (234)
.|.+.=|
T Consensus 5 ~yVW~sY 11 (46)
T PF04995_consen 5 FYVWSSY 11 (46)
T ss_pred HHHHHHH
Confidence 3444444
No 263
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=31.82 E-value=4.2e+02 Score=24.51 Aligned_cols=57 Identities=7% Similarity=-0.098 Sum_probs=33.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhccchh-h----hHhhhhhchhhhhHHHHHHhhCCCCCCC
Q 038282 110 RRPLMLTIILLVSWIGHLLIAFNVPGGL-N----IMGFNFGAQWPLVFAITSEFFGPKNHKE 166 (234)
Q Consensus 110 gr~~~l~~~~~~~~i~~~ll~~~~~~~l-~----l~G~~~G~~~~~~p~l~~~~fG~~~~~~ 166 (234)
.+...+.+..+..+-.++.+......++ | ++...+....++...-+++--..|.+|-
T Consensus 301 ~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gL 362 (433)
T KOG3810|consen 301 WGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGL 362 (433)
T ss_pred hhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhhee
Confidence 3344455555555434433333222222 3 8888888888888777777777777763
No 264
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=29.29 E-value=2.9e+02 Score=24.33 Aligned_cols=85 Identities=15% Similarity=0.024 Sum_probs=45.0
Q ss_pred CHHHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc-cchHHHHHHHHHH
Q 038282 43 TILQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF-FRRPLMLTIILLV 121 (234)
Q Consensus 43 ~~~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~-~gr~~~l~~~~~~ 121 (234)
.++++.|+|+-+..++...........++.. ....++.++.+..=.+-.++++ .+||++.+= +.|-+.+.+.+..
T Consensus 61 ~~~~~~~~p~~~~~~~l~a~li~~nW~lfiW--Avn~g~~leaSLGY~InPL~~V--llG~lflkErls~~Q~iAV~lA~ 136 (293)
T COG2962 61 ELKQLLKQPKTLLMLALTALLIGLNWWLFIW--AVNNGHVLEASLGYFINPLVNV--LLGRLFLKERLSRLQWIAVGLAA 136 (293)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHhhe--ecCCCchhHHHhHHHHHHHHHH--HHHHHHHHhhccHHHHHHHHHHH
Confidence 4667889987766554332222222211111 1111122333333344444443 477777775 8888888888877
Q ss_pred HHHHHHHHHh
Q 038282 122 SWIGHLLIAF 131 (234)
Q Consensus 122 ~~i~~~ll~~ 131 (234)
.++...++..
T Consensus 137 ~GV~~~~~~~ 146 (293)
T COG2962 137 AGVLIQTWLL 146 (293)
T ss_pred HHHHHHHHHc
Confidence 7777666554
No 265
>COG3247 HdeD Uncharacterized conserved protein [Function unknown]
Probab=28.18 E-value=2.5e+02 Score=23.02 Aligned_cols=72 Identities=21% Similarity=0.101 Sum_probs=38.0
Q ss_pred HHHHHHHHHHhhhhHHhHHhhHHHHHHhhCCChhhHHHHHHHHHHhcccccccccc-----cchHHHHHHHHHHHHHHHH
Q 038282 53 MLILFLATICGVGGTLLAIDNLRQIGTSLGYPKRGISTFVSLVNIWNCLGRVVSGF-----FRRPLMLTIILLVSWIGHL 127 (234)
Q Consensus 53 F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~s~~~aa~~~si~~i~~~vGRl~~G~-----~gr~~~l~~~~~~~~i~~~ 127 (234)
+|.+++.-++....+.....+. +.++.....+..+.-+++.+-|+..+. .|.-+.+....+-..++..
T Consensus 75 ~W~lll~Gil~i~~gil~~~~~-------~~~~~~l~~lia~~~i~~GI~ri~~~~~~~~~~G~~w~ii~Gvl~ii~g~i 147 (185)
T COG3247 75 FWPLLLSGILSILLGILAGFNP-------GLGALVLTYLIAIWFIASGILRIVVAFRLRSLPGWWWMIISGVLGIIAGLI 147 (185)
T ss_pred chHHHHHHHHHHHHHHHHHHhh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCcHHHHHHHHHHHHHHHH
Confidence 6766555555444444332221 133444556666666777777777776 2333344444444555665
Q ss_pred HHHh
Q 038282 128 LIAF 131 (234)
Q Consensus 128 ll~~ 131 (234)
++..
T Consensus 148 ll~~ 151 (185)
T COG3247 148 LLFN 151 (185)
T ss_pred HHHc
Confidence 5554
No 266
>PF10669 Phage_Gp23: Protein gp23 (Bacteriophage A118); InterPro: IPR018926 This entry is represented by the major tail subunit protein, Gp23 of Listeria phage A118 and prophage found in Bacilli. The function is currently unknown.
Probab=28.15 E-value=1.9e+02 Score=21.12 Aligned_cols=16 Identities=6% Similarity=0.075 Sum_probs=6.8
Q ss_pred hhhhhhHHHHHHHhhhH
Q 038282 202 MTRKFYKSDIHQRFREA 218 (234)
Q Consensus 202 ~~~~~~~~~~~~~~~~~ 218 (234)
..++-.+.-..+ .|+|
T Consensus 39 ~~~r~~r~~MKE-ER~K 54 (121)
T PF10669_consen 39 HDSRQVRIRMKE-ERSK 54 (121)
T ss_pred hhHHHHHHHHHH-HHHH
Confidence 334444444444 4444
No 267
>KOG1608 consensus Protein transporter of the TRAM (translocating chain-associating membrane) superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=27.95 E-value=3.6e+02 Score=24.03 Aligned_cols=22 Identities=14% Similarity=0.108 Sum_probs=16.1
Q ss_pred cccccHHHHH-HHHHHHHHHHHH
Q 038282 175 GVECFKLSFI-MTAATLFSAFVS 196 (234)
Q Consensus 175 ~~g~Y~~~f~-~a~~~~va~~l~ 196 (234)
.+|+++..++ .+++..+.++=.
T Consensus 287 ~~GNfN~l~~rl~vL~~vc~~Qa 309 (374)
T KOG1608|consen 287 STGNFNTLAIRLAVLLSVCALQA 309 (374)
T ss_pred ccCchhHHHHHHHHHHHHHHHHH
Confidence 4799999998 777766665433
No 268
>MTH00057 ND6 NADH dehydrogenase subunit 6; Provisional
Probab=26.68 E-value=55 Score=26.70 Aligned_cols=27 Identities=15% Similarity=0.150 Sum_probs=21.1
Q ss_pred cccHHHHH-HHHHHHHHHHHHHHHHhhh
Q 038282 177 ECFKLSFI-MTAATLFSAFVSLILVLMT 203 (234)
Q Consensus 177 g~Y~~~f~-~a~~~~va~~l~l~l~~~~ 203 (234)
..|-.+|. .+.+.+++.+-+..+.+++
T Consensus 140 t~Y~l~fe~~s~lLLvAmIGAIvLa~~~ 167 (186)
T MTH00057 140 TDYYYLFILASFILLVAMIGAIVLTHDL 167 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 66999999 8888888888777775543
No 269
>PRK11677 hypothetical protein; Provisional
Probab=26.26 E-value=1.2e+02 Score=23.56 Aligned_cols=11 Identities=36% Similarity=0.767 Sum_probs=6.0
Q ss_pred cccchhhhhhc
Q 038282 223 AADKGEMEQYN 233 (234)
Q Consensus 223 ~~~~~~~~~~~ 233 (234)
...+-|.|||.
T Consensus 39 e~~k~ele~Yk 49 (134)
T PRK11677 39 EKNKAELEEYR 49 (134)
T ss_pred HHHHHHHHHHH
Confidence 33455666663
No 270
>PF01988 VIT1: VIT family; InterPro: IPR008217 Proteins containing this entry have no known function and are predicted to be integral membrane proteins. They include the Ccc1 protein from Saccharomyces cerevisiae (Baker's yeast) (P47818 from SWISSPROT) that may have a role in regulating calcium levels [].
Probab=25.83 E-value=1.7e+02 Score=24.09 Aligned_cols=47 Identities=17% Similarity=0.040 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHh--hhhhhhHHHHHHHhhhHHhhccccchhhhh
Q 038282 185 MTAATLFSAFVSLILVL--MTRKFYKSDIHQRFREAAAKSAADKGEMEQ 231 (234)
Q Consensus 185 ~a~~~~va~~l~l~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (234)
.+....++..+++.+-. ..|.......+++.||+.|-....|+|+|+
T Consensus 36 ~gla~~iAga~SMa~G~yls~~se~~~~~~e~~re~~e~~~~pe~e~~e 84 (213)
T PF01988_consen 36 AGLAGLIAGAISMAVGEYLSVKSERDLYEAEREREEWELENNPEEEKEE 84 (213)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHHhChHhHHHH
Confidence 44555555555444321 112222223456666776666666777664
No 271
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=25.64 E-value=3.2e+02 Score=26.37 Aligned_cols=135 Identities=20% Similarity=0.193 Sum_probs=82.4
Q ss_pred hhHHhHHhhHHHHHH-hhCCChhhHHHHHHHHHHhcccccccccc-----cchHHHHHHHHHHHHHHHHHHHhhc-----
Q 038282 65 GGTLLAIDNLRQIGT-SLGYPKRGISTFVSLVNIWNCLGRVVSGF-----FRRPLMLTIILLVSWIGHLLIAFNV----- 133 (234)
Q Consensus 65 ~~~~~~~~~~~~~~~-~~G~s~~~aa~~~si~~i~~~vGRl~~G~-----~gr~~~l~~~~~~~~i~~~ll~~~~----- 133 (234)
.+...+..++..+.. +.+.+...++..++.++-......++.++ .||.+++.++.++..++..++....
T Consensus 51 ~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l 130 (571)
T KOG1237|consen 51 LAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPAL 130 (571)
T ss_pred HhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 333344456666555 46777777887777777655555555555 7999999888888777654443210
Q ss_pred -c--------------ch------hh----hHhhhhhchhhhhHHHHHHhhCCCCC---CCC------------C-----
Q 038282 134 -P--------------GG------LN----IMGFNFGAQWPLVFAITSEFFGPKNH---KEP------------E----- 168 (234)
Q Consensus 134 -~--------------~~------l~----l~G~~~G~~~~~~p~l~~~~fG~~~~---~~~------------g----- 168 (234)
+ .. +| +..+|.|++-+...+.-+|=|+.++- ... +
T Consensus 131 ~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a 210 (571)
T KOG1237|consen 131 LPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLA 210 (571)
T ss_pred CCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHH
Confidence 0 00 12 77788899888888877777772222 111 1
Q ss_pred -Cccccc-cccccHHHHH-HHHHHHHHHHHHHHH
Q 038282 169 -DDLNCI-GVECFKLSFI-MTAATLFSAFVSLIL 199 (234)
Q Consensus 169 -~g~~~d-~~g~Y~~~f~-~a~~~~va~~l~l~l 199 (234)
....+- ...+|...|- ..++.+++.++.+..
T Consensus 211 ~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 211 QTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred HHHHHhhhhcccceeeccHHHHHHHHHHHHHHcC
Confidence 111122 4567877787 777777777665544
No 272
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=25.22 E-value=96 Score=23.60 Aligned_cols=21 Identities=14% Similarity=0.189 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhh
Q 038282 185 MTAATLFSAFVSLILVLMTRK 205 (234)
Q Consensus 185 ~a~~~~va~~l~l~l~~~~~~ 205 (234)
++++..+.+++.+++++++||
T Consensus 74 ~aGvIg~Illi~y~irR~~Kk 94 (122)
T PF01102_consen 74 MAGVIGIILLISYCIRRLRKK 94 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHHHHHHHHHHHHHHhcc
Confidence 333333333334444443333
No 273
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=24.73 E-value=89 Score=29.30 Aligned_cols=69 Identities=14% Similarity=0.237 Sum_probs=39.7
Q ss_pred HHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhhccchhh-h--HhhhhhchhhhhHHHHHHhhCCCCCC
Q 038282 96 NIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFNVPGGLN-I--MGFNFGAQWPLVFAITSEFFGPKNHK 165 (234)
Q Consensus 96 ~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~~~~~l~-l--~G~~~G~~~~~~p~l~~~~fG~~~~~ 165 (234)
++...+--+..|. +|||..+.+.++.+.+..+++.+.. .+.+ + ...+++..++..-++++|.--.++..
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~~~~l~g~~~~~~s~~~a~vadis~~~~R~ 147 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFLLLGLSGGFSAIFSVGFAYVADISSEEERS 147 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhhhcccccchhhhhhhhhhheeeccchhHHH
Confidence 4556666677777 7999988887777766655554422 1111 2 22234444555555666666555443
No 274
>PF14770 TMEM18: Transmembrane protein 18
Probab=24.55 E-value=2.1e+02 Score=21.77 Aligned_cols=48 Identities=8% Similarity=-0.018 Sum_probs=26.3
Q ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhHHh
Q 038282 173 CIGVECFKLSFIMTAATLFSAFVSLILVLMTRKFYKSDIHQRFREAAA 220 (234)
Q Consensus 173 ~d~~g~Y~~~f~~a~~~~va~~l~l~l~~~~~~~~~~~~~~~~~~~~~ 220 (234)
+|..|=+-..++.+.+.+.+.++....-.+..+.-.+.++.+-|.|+|
T Consensus 75 FDs~G~Fisvv~s~PlLl~~~ii~~~~l~~~~~lmv~~Kr~qlr~~~r 122 (123)
T PF14770_consen 75 FDSSGVFISVVFSAPLLLNCLIILVNWLYQLCSLMVQVKRAQLRRKAR 122 (123)
T ss_pred cCCCCeeehHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 677776666666666666666655444444444444444444444443
No 275
>TIGR00822 EII-Sor PTS system, mannose/fructose/sorbose family, IIC component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Man (PTS splinter group) family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine,N-acetylglucosamine, and other sugars. Other members of this family can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the sorbose-specific IIC subunits of this family of PTS transporters.
Probab=24.33 E-value=63 Score=28.00 Aligned_cols=14 Identities=36% Similarity=0.752 Sum_probs=11.1
Q ss_pred hccccchhhhhhcC
Q 038282 221 KSAADKGEMEQYNN 234 (234)
Q Consensus 221 ~~~~~~~~~~~~~~ 234 (234)
..++.|.|.|.|.|
T Consensus 252 ~~~~~~~~~~~~~~ 265 (265)
T TIGR00822 252 SPAASKNELDDYDD 265 (265)
T ss_pred CCCCCccccccccC
Confidence 34678999999986
No 276
>PF14012 DUF4229: Protein of unknown function (DUF4229)
Probab=24.31 E-value=2.2e+02 Score=19.20 Aligned_cols=30 Identities=27% Similarity=0.218 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Q 038282 185 MTAATLFSAFVSLILVLMTRKFYKSDIHQR 214 (234)
Q Consensus 185 ~a~~~~va~~l~l~l~~~~~~~~~~~~~~~ 214 (234)
.....+++..+++.+-++.|+.-++++.++
T Consensus 36 ~l~A~vis~~lS~~ll~~~R~~~~~~ia~~ 65 (69)
T PF14012_consen 36 ALLALVISMPLSYVLLRRLRDRASADIAAR 65 (69)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555566666677766666666666666554
No 277
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=24.29 E-value=50 Score=32.90 Aligned_cols=52 Identities=23% Similarity=0.232 Sum_probs=40.6
Q ss_pred hCCChhhHHHHHHHHHHhcccccccccc----cchHHHHHHHHHHHHHHHHHHHhh
Q 038282 81 LGYPKRGISTFVSLVNIWNCLGRVVSGF----FRRPLMLTIILLVSWIGHLLIAFN 132 (234)
Q Consensus 81 ~G~s~~~aa~~~si~~i~~~vGRl~~G~----~gr~~~l~~~~~~~~i~~~ll~~~ 132 (234)
.++++++.+.+.+..-++|++.-++..+ ..|.+++....++++++.++..++
T Consensus 127 F~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alP 182 (735)
T KOG3626|consen 127 FKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALP 182 (735)
T ss_pred cCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhCh
Confidence 4898888888888888888887777666 577778888888888887776654
No 278
>PTZ00370 STEVOR; Provisional
Probab=23.57 E-value=1.2e+02 Score=26.69 Aligned_cols=32 Identities=6% Similarity=0.110 Sum_probs=22.5
Q ss_pred cccHHHHH-HHHHHHHHHHHHHHHHhhhhhhhH
Q 038282 177 ECFKLSFI-MTAATLFSAFVSLILVLMTRKFYK 208 (234)
Q Consensus 177 g~Y~~~f~-~a~~~~va~~l~l~l~~~~~~~~~ 208 (234)
..|--+-+ ...++++-.++.+|+.+|+++.|+
T Consensus 255 ~Pygiaalvllil~vvliilYiwlyrrRK~swk 287 (296)
T PTZ00370 255 YPYGIAALVLLILAVVLIILYIWLYRRRKNSWK 287 (296)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhcchhH
Confidence 45666666 666667777777788778887774
No 279
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=21.96 E-value=1.3e+02 Score=28.64 Aligned_cols=63 Identities=16% Similarity=0.186 Sum_probs=35.6
Q ss_pred HHHhccHHHHHHHHHHHHhhhhHHhHHhhHHHHHHhhCC-C----hhhHHHHHHHHHHhcccccccccc
Q 038282 45 LQALFSMDMLILFLATICGVGGTLLAIDNLRQIGTSLGY-P----KRGISTFVSLVNIWNCLGRVVSGF 108 (234)
Q Consensus 45 ~~~lk~~~F~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~-s----~~~aa~~~si~~i~~~vGRl~~G~ 108 (234)
.+++|.|+. ..+++.+.+.+..+.+.....-+....|. + ......++.+..+.+.++...++.
T Consensus 252 gDVFR~P~~-~~lls~lvG~G~Qll~~~~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~ 319 (521)
T PF02990_consen 252 GDVFRPPKH-PMLLSALVGTGIQLLFMALVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSAR 319 (521)
T ss_pred HHHhcCcCC-chHHHhHhcchhhhhHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHH
Confidence 478999985 44566666666665544433333333332 2 233445555666666666666665
No 280
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=21.18 E-value=1.2e+02 Score=26.59 Aligned_cols=32 Identities=13% Similarity=0.161 Sum_probs=21.6
Q ss_pred cccHHHHH-HHHHHHHHHHHHHHHHhhhhhhhH
Q 038282 177 ECFKLSFI-MTAATLFSAFVSLILVLMTRKFYK 208 (234)
Q Consensus 177 g~Y~~~f~-~a~~~~va~~l~l~l~~~~~~~~~ 208 (234)
..|--+-+ ...++++-.++.+|+.+|+++.|+
T Consensus 259 ~Pcgiaalvllil~vvliiLYiWlyrrRK~swk 291 (295)
T TIGR01478 259 LPYGIAALVLIILTVVLIILYIWLYRRRKKSWK 291 (295)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 45555555 666666667777777777777774
No 281
>PF02416 MttA_Hcf106: mttA/Hcf106 family; InterPro: IPR003369 Members of this protein family are involved in a sec-independent translocation mechanism. This pathway has been called the DeltapH pathway in chloroplasts []. Members of this family in Escherichia coli are involved in export of redox proteins with a "twin arginine" leader motif (S/T-R-R-X-F-L-K) []. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports proteins with bound cofactors that require folding prior to export.; GO: 0008565 protein transporter activity, 0015031 protein transport; PDB: 2L16_A.
Probab=21.07 E-value=1.7e+02 Score=18.57 Aligned_cols=26 Identities=15% Similarity=0.066 Sum_probs=11.3
Q ss_pred hhhhhHHHHHHHhhhHHhhccccchh
Q 038282 203 TRKFYKSDIHQRFREAAAKSAADKGE 228 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (234)
+=+...+.+.+.-|+=++.....+.|
T Consensus 21 kLP~~~r~lG~~ir~fk~~~~~~~~~ 46 (53)
T PF02416_consen 21 KLPELARSLGKAIREFKKAINEAKEE 46 (53)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 34444555555555443333333333
No 282
>PRK03449 putative inner membrane protein translocase component YidC; Provisional
Probab=20.75 E-value=2e+02 Score=25.49 Aligned_cols=36 Identities=17% Similarity=0.037 Sum_probs=25.2
Q ss_pred HHHHHHhhhhhhhHHHHHHHhhhHHhhccccchhhhh
Q 038282 195 VSLILVLMTRKFYKSDIHQRFREAAAKSAADKGEMEQ 231 (234)
Q Consensus 195 l~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (234)
=.+++.++..+ ..|+..+++|+++.++..++||++.
T Consensus 262 Qq~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (304)
T PRK03449 262 QQHYVFGKIDK-EEEAKKQAKAERRAANAPKPGAKPK 297 (304)
T ss_pred HHHHHHhhccc-hhhHHHHHHHHHHhccCCCCCCCCC
Confidence 33334443333 4678888999999999999998764
No 283
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=20.67 E-value=3e+02 Score=19.11 Aligned_cols=19 Identities=16% Similarity=0.212 Sum_probs=10.7
Q ss_pred HHHHHHHHhcccccccccc
Q 038282 90 TFVSLVNIWNCLGRVVSGF 108 (234)
Q Consensus 90 ~~~si~~i~~~vGRl~~G~ 108 (234)
...+...++..++..+.|+
T Consensus 91 ~~~~~~~~g~~~~~~~~~~ 109 (141)
T TIGR00880 91 LMSAGIALGPLLGPPLGGV 109 (141)
T ss_pred HHHHhHHHHHHHhHHhHHH
Confidence 3344445566666666666
Done!