BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038290
(139 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2
SV=1
Length = 127
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 70/91 (76%), Gaps = 7/91 (7%)
Query: 39 DLVTRLEASGGLTECWNALMELKSCSNEIVIFFLNSQANIGLDCCRAIDIITRNCRPAML 98
++ RL+ SGGL ECWNAL ELKSC+NEIV+FFLN + +G+ CC ++DIIT NC PAML
Sbjct: 35 NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAML 93
Query: 99 TSLGFTAEEGNILRGYC------DASSAPSP 123
TSLGFT EE N+LRG+C D+S APSP
Sbjct: 94 TSLGFTPEEANVLRGFCQNPNSGDSSPAPSP 124
>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2
SV=1
Length = 125
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 74/111 (66%), Gaps = 7/111 (6%)
Query: 7 FFILAFTFLIMANIANATCRNDRLNNNMKPGYDLVTRLEASGGLTECWNALMELKSCSNE 66
F L++ NI+ T + N + RL GGL ECWNAL ELKSC+NE
Sbjct: 7 FLFATIAILLVLNISGRTLPETEDSTN------IAARLNG-GGLMECWNALYELKSCTNE 59
Query: 67 IVIFFLNSQANIGLDCCRAIDIITRNCRPAMLTSLGFTAEEGNILRGYCDA 117
IV+FFLN + +G+DCC+A+++IT +C PAMLTSLGFT++E N+LRG+C +
Sbjct: 60 IVLFFLNGETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDETNVLRGFCQS 110
>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2
SV=1
Length = 125
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 76/119 (63%), Gaps = 9/119 (7%)
Query: 7 FFILAFTFLIMANIANATCRNDRLNNNMKPGYDLVTRLEASGGLTECWNALMELKSCSNE 66
F + T L++ N+++ R + ++ RL GGL +CW+AL ELKSC+NE
Sbjct: 7 FLFVTVTLLLVLNVSS------RALPPVADSTNIAARLTG-GGLMQCWDALYELKSCTNE 59
Query: 67 IVIFFLNSQANIGLDCCRAIDIITRNCRPAMLTSLGFTAEEGNILRGYCDA--SSAPSP 123
IV+FFLN + +G CC A+D+IT +C PAMLTSLGFT EE N+LRG+C + S SP
Sbjct: 60 IVLFFLNGETKLGYGCCNAVDVITTDCWPAMLTSLGFTLEETNVLRGFCQSPNSGGSSP 118
>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2
SV=1
Length = 158
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 56/86 (65%)
Query: 35 KPGYDLVTRLEASGGLTECWNALMELKSCSNEIVIFFLNSQANIGLDCCRAIDIITRNCR 94
P LV RL+ CW++LM+L+ CS E+++FFLN + IG CC AI I R C
Sbjct: 39 SPTTSLVYRLKLDEDTGYCWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKCW 98
Query: 95 PAMLTSLGFTAEEGNILRGYCDASSA 120
P M+ LGFTA+EG++L+GYCD + +
Sbjct: 99 PTMIGVLGFTAQEGDMLQGYCDGNDS 124
>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2
SV=1
Length = 155
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 15/104 (14%)
Query: 40 LVTRLEASGGLTECWNALMELKSCSNEIVIFFLNS--------QANIGLDCCRAIDIITR 91
+ T +G L +CWNA +ELKSC++EIV FFL+ + I DCC AI ++ +
Sbjct: 40 MATDHSGAGNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVK 99
Query: 92 NCRPAMLTSLGFTAEEGNILRGYC-------DASSAPSPDGLAV 128
+C M TSLG T EGN LR YC + S +P+P+ LA+
Sbjct: 100 DCWSVMFTSLGLTTMEGNNLREYCEFQAEKSELSPSPAPETLAL 143
>sp|P55742|AMP_CLOTM Putative aminopeptidase OS=Clostridium thermocellum GN=celM PE=3
SV=1
Length = 330
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 12/129 (9%)
Query: 15 LIMANIANATCRNDRLNNNMKPGYDLVTR-LEASGGLTECWNALMELKSCSNEIVIFFLN 73
L M NI + C + + + G ++++ L+ G A+ ELK NEI F
Sbjct: 140 LKMVNIGDVACF---VGDAVLQGDTVISKALDNRSGCAVVVKAIKELKKTDNEI-YFVFT 195
Query: 74 SQANIGLDCCRAIDIITRNCRPAMLTSLGFT----AEEGNILRGYCDASSAPSPDGLAVI 129
Q +GL R + +P + ++ T E + + C A +VI
Sbjct: 196 VQEEVGL---RGAKTAAFSIKPDIAIAVDVTMTGDTPESHPMEVKCGGGPAIKVKDRSVI 252
Query: 130 CQPQVSKVL 138
C P+V K+L
Sbjct: 253 CHPEVRKLL 261
>sp|A4TCS1|DCUP_MYCGI Uroporphyrinogen decarboxylase OS=Mycobacterium gilvum (strain
PYR-GCK) GN=hemE PE=3 SV=1
Length = 354
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 49 GLTECWNALMELKSCSNEIVIFFLNSQANIGLDCCRAID 87
G TE WNALM + ++ I FL Q + G+D + D
Sbjct: 173 GETETWNALM---AALTDVTIEFLRVQLDAGVDAIQVFD 208
>sp|C8Z692|KRE28_YEAS8 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain Lalvin EC1118 / Prise de mousse) GN=KRE28 PE=3
SV=1
Length = 385
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 32 NNMKPGYDLVTRL--EASGGLTECWNALMELKSCSN 65
+N DL+ L EA+G + CW++L ELK+ +N
Sbjct: 163 HNFAEKQDLINELYLEATGDIENCWDSLNELKNLTN 198
>sp|A6ZZB9|KRE28_YEAS7 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain YJM789) GN=KRE28 PE=3 SV=1
Length = 385
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 32 NNMKPGYDLVTRL--EASGGLTECWNALMELKSCSN 65
+N DL+ L EA+G + CW++L ELK+ +N
Sbjct: 163 HNFAEKQDLINELYLEATGDIENCWDSLNELKNLTN 198
>sp|B5VH51|KRE28_YEAS6 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain AWRI1631) GN=KRE28 PE=3 SV=1
Length = 385
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 32 NNMKPGYDLVTRL--EASGGLTECWNALMELKSCSN 65
+N DL+ L EA+G + CW++L ELK+ +N
Sbjct: 163 HNFAEKQDLINELYLEATGDIENCWDSLNELKNLTN 198
>sp|C7GKW3|KRE28_YEAS2 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain JAY291) GN=KRE28 PE=3 SV=1
Length = 385
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 32 NNMKPGYDLVTRL--EASGGLTECWNALMELKSCSN 65
+N DL+ L EA+G + CW++L ELK+ +N
Sbjct: 163 HNFAEKQDLINELYLEATGDIENCWDSLNELKNLTN 198
>sp|B3LFD9|KRE28_YEAS1 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=KRE28 PE=3 SV=1
Length = 385
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 32 NNMKPGYDLVTRL--EASGGLTECWNALMELKSCSN 65
+N DL+ L EA+G + CW++L ELK+ +N
Sbjct: 163 HNFAEKQDLINELYLEATGDIENCWDSLNELKNLTN 198
>sp|Q04431|KRE28_YEAST Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=KRE28 PE=1 SV=1
Length = 385
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 32 NNMKPGYDLVTRL--EASGGLTECWNALMELKSCSN 65
+N DL+ L EA+G + CW++L ELK+ +N
Sbjct: 163 HNFAERQDLINELYLEATGDIENCWDSLNELKNLTN 198
>sp|P05882|ENV_HV1Z8 Envelope glycoprotein gp160 OS=Human immunodeficiency virus type 1
group M subtype D (isolate Z84) GN=env PE=3 SV=1
Length = 863
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 42 TRLEASGGLTECWNALMELKSCSNEIVIFFLNSQANIGLDCCRAIDIITRNCRPAMLTSL 101
T+L +G L E ++ ++ +N + ++ ++ ++C R + ITR P L
Sbjct: 269 TQLLLNGSLAEE-EIIIRSENLTNNVKTIIVHLNESVEINCTRPDNKITRQSTPIGLGQA 327
Query: 102 GFTAE-EGNILRGYCDASSA 120
+T +G+I + YC+ S+A
Sbjct: 328 LYTTRIKGDIRQAYCNISAA 347
>sp|Q56A08|GPKOW_MOUSE G patch domain and KOW motifs-containing protein OS=Mus musculus
GN=Gpkow PE=2 SV=2
Length = 488
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 15 LIMANIANATCRNDRLNNNMKPGYDLVTRLEASGGLTECWNALMELKSCSNEIVIFFLNS 74
L++ I N + R L+ N KP + T L + G L++ L+E S L
Sbjct: 67 LVIPLIQNGS-RRQPLSKNPKPSSETSTVLMSDGVLSQAVKELIEESKKS-------LEE 118
Query: 75 QANIGLDCCRAIDIITRNCRP 95
+ N G+D I +I + C P
Sbjct: 119 RENAGVDPTLTIPMIQKGCTP 139
>sp|O76096|CYTF_HUMAN Cystatin-F OS=Homo sapiens GN=CST7 PE=1 SV=1
Length = 145
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 9 ILAFTFLIMANIANA---TCRNDRLNNNMKPGYDLVTRLEASGGLTECWNALMELKSCSN 65
+LAF L+++ TC D LN+ +KPG+ + G L ++ + +C+N
Sbjct: 7 LLAFCCLVLSTTGGPSPDTCSQD-LNSRVKPGFPKTIKTNDPGVLQAARYSVEKFNNCTN 65
Query: 66 EIVIF 70
++ +F
Sbjct: 66 DMFLF 70
>sp|P0C9J9|11012_ASFM2 Protein MGF 110-12L OS=African swine fever virus (isolate
Tick/Malawi/Lil 20-1/1983) GN=Mal-017 PE=3 SV=1
Length = 171
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 3 LKHVFFILAFTFLIMANIANATCRNDRLNNNMK 35
++H F L F+F +A A C+N RL MK
Sbjct: 121 IRHYCFYLVFSFAFAGCVAFAICKNLRLRTTMK 153
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.137 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,439,765
Number of Sequences: 539616
Number of extensions: 1610622
Number of successful extensions: 4117
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 4104
Number of HSP's gapped (non-prelim): 22
length of query: 139
length of database: 191,569,459
effective HSP length: 104
effective length of query: 35
effective length of database: 135,449,395
effective search space: 4740728825
effective search space used: 4740728825
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)