Query 038292
Match_columns 122
No_of_seqs 113 out of 1054
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 09:32:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038292.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038292hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02216 protein SRG1 100.0 4.7E-38 1E-42 247.8 11.0 117 1-117 223-357 (357)
2 PLN02947 oxidoreductase 100.0 1.8E-37 3.9E-42 245.8 11.9 117 1-118 238-372 (374)
3 PLN02639 oxidoreductase, 2OG-F 100.0 6.8E-37 1.5E-41 239.5 10.1 115 2-116 204-336 (337)
4 PLN03001 oxidoreductase, 2OG-F 100.0 1.1E-36 2.3E-41 231.6 10.4 114 1-115 129-260 (262)
5 PLN02758 oxidoreductase, 2OG-F 100.0 1.7E-36 3.8E-41 239.2 11.1 117 1-117 224-359 (361)
6 PLN02912 oxidoreductase, 2OG-F 100.0 3E-36 6.5E-41 236.9 10.0 116 2-118 211-346 (348)
7 PLN02276 gibberellin 20-oxidas 100.0 2.7E-36 6E-41 238.0 9.5 116 1-117 219-352 (361)
8 PLN02393 leucoanthocyanidin di 100.0 5.8E-36 1.3E-40 236.3 10.4 117 2-118 227-361 (362)
9 PLN03178 leucoanthocyanidin di 100.0 4.9E-36 1.1E-40 236.5 9.5 117 1-118 224-359 (360)
10 PLN02299 1-aminocyclopropane-1 100.0 5.4E-36 1.2E-40 233.3 9.3 118 1-118 171-309 (321)
11 PLN02904 oxidoreductase 100.0 9.7E-36 2.1E-40 234.7 9.4 117 1-119 221-356 (357)
12 PLN02254 gibberellin 3-beta-di 100.0 1.5E-35 3.3E-40 233.6 9.4 113 1-117 223-354 (358)
13 PLN02365 2-oxoglutarate-depend 100.0 7.6E-35 1.6E-39 224.9 9.8 114 2-115 163-296 (300)
14 PLN02704 flavonol synthase 100.0 1.1E-34 2.4E-39 226.9 10.7 102 1-103 212-331 (335)
15 PLN02997 flavonol synthase 100.0 1.3E-34 2.8E-39 225.9 10.3 102 2-104 197-316 (325)
16 KOG0143 Iron/ascorbate family 100.0 2E-34 4.3E-39 224.6 10.3 113 1-114 189-320 (322)
17 PLN02156 gibberellin 2-beta-di 100.0 2.5E-34 5.4E-39 225.0 10.0 104 3-107 195-317 (335)
18 PLN00417 oxidoreductase, 2OG-F 100.0 4.5E-34 9.8E-39 224.5 9.6 111 2-114 217-345 (348)
19 PLN02485 oxidoreductase 100.0 4E-34 8.7E-39 223.1 9.1 105 2-106 202-327 (329)
20 PLN02515 naringenin,2-oxogluta 100.0 1.1E-33 2.5E-38 223.0 9.6 105 1-107 208-332 (358)
21 PLN02750 oxidoreductase, 2OG-F 100.0 1.4E-33 3E-38 221.4 9.9 104 2-106 207-330 (345)
22 PLN03002 oxidoreductase, 2OG-F 100.0 1.7E-33 3.6E-38 220.1 9.7 105 3-108 198-324 (332)
23 PTZ00273 oxidase reductase; Pr 100.0 2E-33 4.3E-38 218.4 9.5 104 2-106 192-313 (320)
24 PLN02984 oxidoreductase, 2OG-F 100.0 6.4E-32 1.4E-36 211.9 10.4 106 2-118 214-340 (341)
25 PLN02403 aminocyclopropanecarb 100.0 7E-32 1.5E-36 208.8 9.4 110 2-118 167-297 (303)
26 COG3491 PcbC Isopenicillin N s 99.9 2.3E-27 5.1E-32 182.0 7.8 90 2-92 188-297 (322)
27 PF03171 2OG-FeII_Oxy: 2OG-Fe( 99.7 5.9E-18 1.3E-22 110.4 6.0 67 1-68 12-98 (98)
28 PF13640 2OG-FeII_Oxy_3: 2OG-F 94.3 0.15 3.4E-06 32.4 5.2 62 6-67 11-100 (100)
29 PF12851 Tet_JBP: Oxygenase do 94.0 0.29 6.4E-06 35.1 6.7 62 6-67 86-170 (171)
30 PF13759 2OG-FeII_Oxy_5: Putat 79.1 4.4 9.4E-05 26.0 4.1 30 35-64 64-100 (101)
31 smart00702 P4Hc Prolyl 4-hydro 74.2 17 0.00036 25.4 6.3 60 7-66 96-177 (178)
32 TIGR02466 conserved hypothetic 68.7 8.3 0.00018 28.4 3.8 32 35-66 160-198 (201)
33 COG2140 Thermophilic glucose-6 61.3 19 0.00042 26.8 4.5 36 17-53 115-152 (209)
34 PRK05467 Fe(II)-dependent oxyg 55.7 59 0.0013 24.4 6.4 41 25-66 129-176 (226)
35 PF06560 GPI: Glucose-6-phosph 50.3 40 0.00086 24.6 4.6 38 14-53 92-136 (182)
36 PF12791 RsgI_N: Anti-sigma fa 44.0 24 0.00051 20.1 2.1 22 32-56 13-34 (56)
37 PF13532 2OG-FeII_Oxy_2: 2OG-F 42.1 34 0.00074 24.0 3.2 47 6-53 109-164 (194)
38 PF02373 JmjC: JmjC domain, hy 41.7 62 0.0013 20.4 4.1 34 23-56 76-110 (114)
39 PF06820 Phage_fiber_C: Putati 34.0 29 0.00062 20.8 1.4 35 6-40 17-61 (64)
40 PF11876 DUF3396: Protein of u 32.6 10 0.00022 28.1 -0.9 43 11-53 105-152 (208)
41 PRK15401 alpha-ketoglutarate-d 31.1 1.9E+02 0.0041 21.6 5.7 21 33-53 163-183 (213)
42 smart00460 TGc Transglutaminas 31.0 54 0.0012 18.6 2.3 16 28-43 53-68 (68)
43 KOG3889 Predicted gamma-butyro 30.8 41 0.00089 26.6 2.2 21 5-31 187-207 (371)
44 PRK04190 glucose-6-phosphate i 28.5 1.7E+02 0.0037 21.3 5.0 22 32-53 125-146 (191)
45 PF10777 YlaC: Inner membrane 27.6 27 0.00059 24.8 0.7 23 24-46 92-114 (155)
46 KOG2778 Ubiquitin C-terminal h 25.2 23 0.00051 27.9 -0.0 25 7-31 4-28 (328)
47 KOG1228 Uncharacterized conser 24.0 82 0.0018 23.9 2.6 28 14-43 56-84 (256)
48 PF05520 Citrus_P18: Citrus tr 23.4 47 0.001 22.7 1.2 12 45-56 26-37 (167)
49 COG1741 Pirin-related protein 23.0 1.3E+02 0.0027 23.4 3.6 35 5-39 57-98 (276)
50 PF10509 GalKase_gal_bdg: Gala 21.6 47 0.001 19.0 0.8 13 7-19 25-37 (52)
51 PF02678 Pirin: Pirin; InterP 21.1 1.4E+02 0.0029 19.7 3.0 19 3-21 40-58 (107)
52 PF08699 DUF1785: Domain of un 21.1 1.5E+02 0.0032 16.8 2.8 25 25-50 18-42 (52)
No 1
>PLN02216 protein SRG1
Probab=100.00 E-value=4.7e-38 Score=247.79 Aligned_cols=117 Identities=53% Similarity=0.889 Sum_probs=111.1
Q ss_pred CCccccccccccCCceeEEEecCCCCceEEEECCeEEEecCCCCeEEEEeccceee------------------eceeeE
Q 038292 1 PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET------------------HWRLSI 62 (122)
Q Consensus 1 pe~~~g~~~HtD~~~lTll~qd~~v~GLqV~~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~Si 62 (122)
|+.++|+++|||+|+||||+|+++++||||+++|+|++|+|++|+|||||||+||+ ++|||+
T Consensus 223 ~~~~~G~~~HtD~g~lTlL~q~~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~~HRVv~~~~~~R~Si 302 (357)
T PLN02216 223 PDQVIGLTPHSDAVGLTILLQVNEVEGLQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSV 302 (357)
T ss_pred cccccCccCcccCceEEEEEecCCCCceeEEECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccCceeecCCCCCEEEE
Confidence 45689999999999999999965799999999999999999999999999999998 789999
Q ss_pred EEEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhcccCCccccceecc
Q 038292 63 GTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKSHLDALRI 117 (122)
Q Consensus 63 ~~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~g~~~ld~~~i 117 (122)
+||++|+.|++|+|+++|+++++|++|++++++||+..++++...+++.++.+||
T Consensus 303 ~~F~~P~~d~~i~p~~~lv~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~ 357 (357)
T PLN02216 303 ATFHNTGMGKEIGPAKSLVERQKAALFKSLTTKEYFDGLFSRELDGKAYLDAMRI 357 (357)
T ss_pred EEEecCCCCCeEeCcHHHcCCCCCCCCCCcCHHHHHHHHHhcccCCcchhhhhcC
Confidence 9999999999999999999999999999999999999999999999999999886
No 2
>PLN02947 oxidoreductase
Probab=100.00 E-value=1.8e-37 Score=245.75 Aligned_cols=117 Identities=34% Similarity=0.630 Sum_probs=111.8
Q ss_pred CCccccccccccCCceeEEEecCCCCceEEEECCeEEEecCCCCeEEEEeccceee------------------eceeeE
Q 038292 1 PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET------------------HWRLSI 62 (122)
Q Consensus 1 pe~~~g~~~HtD~~~lTll~qd~~v~GLqV~~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~Si 62 (122)
|+.++|+++|||+|+||||+|| +++||||+++|+|++|+|.||+|||||||+||+ ++||||
T Consensus 238 ~~~~~G~~~HTD~g~lTlL~Qd-~v~GLQV~~~g~Wi~V~p~pga~VVNvGD~Lq~~SNG~~kS~~HRVv~~~~~~R~Si 316 (374)
T PLN02947 238 PELTLGMPPHSDYGFLTLLLQD-EVEGLQIMHAGRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPRISV 316 (374)
T ss_pred cccccCCCCccCCCceEEEEec-CCCCeeEeECCEEEeCCCCCCeEEEEeCceeeeeeCCEEeccccccccCCCCCEEEE
Confidence 4678999999999999999996 899999999999999999999999999999999 789999
Q ss_pred EEEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhcccCCccccceeccc
Q 038292 63 GTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKSHLDALRIE 118 (122)
Q Consensus 63 ~~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~g~~~ld~~~i~ 118 (122)
+||++|+.|++|+|+++|+++++|++|++++++||++.+.++...|++.++.+|+.
T Consensus 317 a~F~~P~~d~~i~Pl~~lv~~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~l~~~~~~ 372 (374)
T PLN02947 317 ASLHSLPFERVVGPAPELVDEQNPRRYMDTDFATFLAYLASAEGKHKNFLESRKLI 372 (374)
T ss_pred EEEecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHHHHHHHhccCchhhhhhhhcc
Confidence 99999999999999999999999999999999999999999888899999999885
No 3
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=6.8e-37 Score=239.53 Aligned_cols=115 Identities=35% Similarity=0.665 Sum_probs=107.6
Q ss_pred CccccccccccCCceeEEEecCCCCceEEEECCeEEEecCCCCeEEEEeccceee------------------eceeeEE
Q 038292 2 EKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET------------------HWRLSIG 63 (122)
Q Consensus 2 e~~~g~~~HtD~~~lTll~qd~~v~GLqV~~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~Si~ 63 (122)
+..+|+++|||+|+||||+||++++||||+++|+|++|+|.+|++|||+||+|++ ++|||++
T Consensus 204 ~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pg~lVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia 283 (337)
T PLN02639 204 ELTYGLPAHTDPNALTILLQDQQVAGLQVLKDGKWVAVNPHPGAFVINIGDQLQALSNGRYKSVWHRAVVNTDKERMSVA 283 (337)
T ss_pred ccccCCCCCcCCCceEEEEecCCcCceEeecCCeEEeccCCCCeEEEechhHHHHHhCCeeeccCcccccCCCCCEEEEE
Confidence 5678999999999999999963599999999999999999999999999999998 7799999
Q ss_pred EEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhcccCCccccceec
Q 038292 64 TIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKSHLDALR 116 (122)
Q Consensus 64 ~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~g~~~ld~~~ 116 (122)
||++|+.|++|+|+++|++.++|++|++++++||++.++.+...++++++.++
T Consensus 284 ~F~~p~~d~~i~pl~~~~~~~~p~~y~p~~~~e~~~~~~~~~~~~~~~l~~~~ 336 (337)
T PLN02639 284 SFLCPCDDAVISPAKKLTDDGTAAVYRDFTYAEYYKKFWSRNLDQEHCLELFK 336 (337)
T ss_pred EEecCCCCceEeCchHHcCCCCCCCCCCCCHHHHHHHHHhccCCCchhhHhhc
Confidence 99999999999999999999999999999999999999998888888887765
No 4
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.1e-36 Score=231.57 Aligned_cols=114 Identities=33% Similarity=0.596 Sum_probs=105.8
Q ss_pred CCccccccccccCCceeEEEecCCCCceEEEECCeEEEecCCCCeEEEEeccceee------------------eceeeE
Q 038292 1 PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET------------------HWRLSI 62 (122)
Q Consensus 1 pe~~~g~~~HtD~~~lTll~qd~~v~GLqV~~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~Si 62 (122)
|+.++|+++|||+|+||||+|| +++||||+++|+|++|+|.+|++||||||+|++ ++|||+
T Consensus 129 ~~~~~g~~~HtD~g~lTlL~qd-~v~GLqV~~~g~Wi~V~p~p~a~vVNiGD~l~~~tng~~~S~~HRVv~~~~~~R~Si 207 (262)
T PLN03001 129 PELTLGLQSHSDFGAITLLIQD-DVEGLQLLKDAEWLMVPPISDAILIIIADQTEIITNGNYKSAQHRAIANANKARLSV 207 (262)
T ss_pred cccccCCcCCcCCCeeEEEEeC-CCCceEEeeCCeEEECCCCCCcEEEEccHHHHHHhCCccccccceEEcCCCCCEEEE
Confidence 3568999999999999999996 899999999999999999999999999999998 779999
Q ss_pred EEEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhcccCCcccccee
Q 038292 63 GTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKSHLDAL 115 (122)
Q Consensus 63 ~~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~g~~~ld~~ 115 (122)
+||++|+.|++|+|+++|++.++|++|++++++||+..++++...+++.++.+
T Consensus 208 a~F~~p~~d~~i~p~~e~v~~~~p~~y~~~~~~e~l~~~~~~~~~~~~~~~~~ 260 (262)
T PLN03001 208 ATFHDPAKTAKIAPASALSTESFPPRYCEIVYGEYVSSWYSKGPEGKRNIDAL 260 (262)
T ss_pred EEEEcCCCCCEEeCChHhcCCCCCCcCCCccHHHHHHHHHHhccCCcchhhhh
Confidence 99999999999999999999989999999999999999998877777766654
No 5
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.7e-36 Score=239.18 Aligned_cols=117 Identities=42% Similarity=0.691 Sum_probs=109.8
Q ss_pred CCccccccccccCCceeEEEecC-CCCceEEEECCeEEEecCCCCeEEEEeccceee------------------eceee
Q 038292 1 PEKVVGLSTHSDDSALAILLEIN-EVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET------------------HWRLS 61 (122)
Q Consensus 1 pe~~~g~~~HtD~~~lTll~qd~-~v~GLqV~~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~S 61 (122)
|+.++|+++|||+|+||||+||+ +++||||+++|+|++|+|.+|++|||+||+||+ ++|||
T Consensus 224 ~~~~~g~~~HtD~g~lTlL~qd~~~v~GLQV~~~g~Wi~V~p~pgalVVNiGD~L~~~SNG~~kS~~HRVv~~~~~~R~S 303 (361)
T PLN02758 224 PDLVLGLSPHSDGSALTVLQQGKGSCVGLQILKDNTWVPVHPVPNALVINIGDTLEVLTNGKYKSVEHRAVTNKEKDRLS 303 (361)
T ss_pred cccccCccCccCCceeEEEEeCCCCCCCeeeeeCCEEEeCCCCCCeEEEEccchhhhhcCCeeecccceeecCCCCCEEE
Confidence 46789999999999999999963 489999999999999999999999999999999 78999
Q ss_pred EEEEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhcccCCccccceecc
Q 038292 62 IGTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKSHLDALRI 117 (122)
Q Consensus 62 i~~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~g~~~ld~~~i 117 (122)
++||++|+.|++|+|+++|+++++|++|++++++||+..++++...+++.++.+|+
T Consensus 304 ia~F~~P~~d~~i~pl~elv~~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~~~~~~~ 359 (361)
T PLN02758 304 IVTFYAPSYEVELGPMPELVDDENPCKYRRYNHGEYSRHYVTSKLQGKKTLEFAKI 359 (361)
T ss_pred EEEEecCCCCCeEeCCHHHcCCCCCCcCCCccHHHHHHHHHhcccCchhhhhhhcc
Confidence 99999999999999999999999999999999999999999988888888888876
No 6
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=3e-36 Score=236.85 Aligned_cols=116 Identities=35% Similarity=0.659 Sum_probs=108.4
Q ss_pred CccccccccccCCceeEEEecCCCCceEEEECCeEEEecCCCCeEEEEeccceee------------------eceeeEE
Q 038292 2 EKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET------------------HWRLSIG 63 (122)
Q Consensus 2 e~~~g~~~HtD~~~lTll~qd~~v~GLqV~~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~Si~ 63 (122)
+.++|+++|||+|+||||+|| +++||||+++|+|++|+|.+|++|||+||+|++ .+|||++
T Consensus 211 ~~~~G~~~HtD~g~lTlL~Qd-~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia 289 (348)
T PLN02912 211 ELTYGLPGHKDANLITVLLQD-EVSGLQVFKDGKWIAVNPIPNTFIVNLGDQMQVISNDKYKSVLHRAVVNTDKERISIP 289 (348)
T ss_pred hhcCCcCCCcCCCceEEEEEC-CCCceEEEECCcEEECCCcCCeEEEEcCHHHHHHhCCEEEcccccccCCCCCCEEEEE
Confidence 457899999999999999996 899999999999999999999999999999998 7799999
Q ss_pred EEeecCCCeEEecCCCccCCC--CCCCCCCccHHHHHHHHHhcccCCccccceeccc
Q 038292 64 TIYSVRYDGEMYPASNLVSEN--TPPLFKRVTVEEYFGNLCARKLRGKSHLDALRIE 118 (122)
Q Consensus 64 ~F~~p~~d~~i~pl~~~v~~~--~p~~y~~~~~~e~~~~~~~~~~~g~~~ld~~~i~ 118 (122)
||++|+.|+.|+|+++|++.+ +|++|++++++||+..++.+...+.++++.+|..
T Consensus 290 ~F~~p~~d~~i~pl~~~v~~~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~l~~~~~~ 346 (348)
T PLN02912 290 TFYCPSEDAVIGPAQELINEEEDSLAIYRNFTYAEYFEKFWDTAFATESCIDSFKAS 346 (348)
T ss_pred EEecCCCCCeEeCCHHHhCcCCCCCCCCCCCcHHHHHHHHHhcccCCcchhhhhhcc
Confidence 999999999999999999865 4899999999999999999888888889988864
No 7
>PLN02276 gibberellin 20-oxidase
Probab=100.00 E-value=2.7e-36 Score=238.03 Aligned_cols=116 Identities=28% Similarity=0.413 Sum_probs=109.0
Q ss_pred CCccccccccccCCceeEEEecCCCCceEEEECCeEEEecCCCCeEEEEeccceee------------------eceeeE
Q 038292 1 PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET------------------HWRLSI 62 (122)
Q Consensus 1 pe~~~g~~~HtD~~~lTll~qd~~v~GLqV~~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~Si 62 (122)
|+..+|+++|||+|+||||+|| +++||||+++|+|++|+|.+|++|||+||+|++ ++|||+
T Consensus 219 ~~~~~g~~~HTD~g~lTlL~Qd-~v~GLQV~~~g~Wi~V~p~pgalVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Si 297 (361)
T PLN02276 219 PELTLGTGPHCDPTSLTILHQD-QVGGLQVFVDNKWRSVRPRPGALVVNIGDTFMALSNGRYKSCLHRAVVNSERERRSL 297 (361)
T ss_pred cccccCCccccCCceeEEEEec-CCCceEEEECCEEEEcCCCCCeEEEEcHHHHHHHhCCccccccceeecCCCCCEEEE
Confidence 4567899999999999999996 899999999999999999999999999999998 789999
Q ss_pred EEEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhcccCCccccceecc
Q 038292 63 GTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKSHLDALRI 117 (122)
Q Consensus 63 ~~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~g~~~ld~~~i 117 (122)
+||++|+.|+.|+|+++|+++++|++|++++++||++.+.++...+++.++.+++
T Consensus 298 a~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~l~~~~~ 352 (361)
T PLN02276 298 AFFLCPKEDKVVRPPQELVDREGPRKYPDFTWSDLLEFTQKHYRADMNTLQAFSN 352 (361)
T ss_pred EEEecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHHHHHHHhcccchhHHHHHHH
Confidence 9999999999999999999999999999999999999999888888888887774
No 8
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=100.00 E-value=5.8e-36 Score=236.25 Aligned_cols=117 Identities=34% Similarity=0.653 Sum_probs=109.1
Q ss_pred CccccccccccCCceeEEEecCCCCceEEEECCeEEEecCCCCeEEEEeccceee------------------eceeeEE
Q 038292 2 EKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET------------------HWRLSIG 63 (122)
Q Consensus 2 e~~~g~~~HtD~~~lTll~qd~~v~GLqV~~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~Si~ 63 (122)
+..+|+++|||+|+||||+|+++++||||+++|+|++|+|.||++|||+||+|++ ++|||++
T Consensus 227 ~~~~g~~~HtD~g~lTlL~q~~~v~GLQV~~~g~W~~V~p~pgalVVNiGD~l~~~Tng~~kSt~HRVv~~~~~~R~Sia 306 (362)
T PLN02393 227 DLTLGLSPHSDPGGMTILLPDDNVAGLQVRRDDAWITVKPVPDAFIVNIGDQIQVLSNAIYKSVEHRVIVNSAKERVSLA 306 (362)
T ss_pred ccccccccccCCceEEEEeeCCCCCcceeeECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccceecccCCCCCEEEEE
Confidence 5678999999999999999965799999999999999999999999999999998 7899999
Q ss_pred EEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhcccCCccccceeccc
Q 038292 64 TIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKSHLDALRIE 118 (122)
Q Consensus 64 ~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~g~~~ld~~~i~ 118 (122)
||++|+.|++|+|+++|+++++|++|++++++||+..+.++...+++.++.+|+.
T Consensus 307 fF~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~ 361 (362)
T PLN02393 307 FFYNPKSDLPIEPLKELVTPDRPALYPPMTFDEYRLFIRTKGPRGKSQVESLKSP 361 (362)
T ss_pred EEecCCCCceEeCcHHhcCCCCCCCCCCccHHHHHHHHHhcccCcchHHhhhccC
Confidence 9999999999999999999999999999999999998888888888888888763
No 9
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=100.00 E-value=4.9e-36 Score=236.47 Aligned_cols=117 Identities=30% Similarity=0.502 Sum_probs=109.5
Q ss_pred CCccccccccccCCceeEEEecCCCCceEEEECCeEEEecCCCCeEEEEeccceee------------------eceeeE
Q 038292 1 PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET------------------HWRLSI 62 (122)
Q Consensus 1 pe~~~g~~~HtD~~~lTll~qd~~v~GLqV~~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~Si 62 (122)
|+.++|+++|||+|+||||+|| +++||||+++|+|++|+|.+|++||||||+||+ .+|||+
T Consensus 224 ~~~~~g~~~HTD~g~lTlL~qd-~v~GLQV~~~g~Wi~V~p~pg~lvVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Si 302 (360)
T PLN03178 224 PDLALGVEAHTDVSALTFILHN-MVPGLQVLYEGKWVTAKCVPDSIVVHIGDTLEILSNGRYKSILHRGLVNKEKVRISW 302 (360)
T ss_pred CccccCcCCccCCCceEEEeeC-CCCceeEeECCEEEEcCCCCCeEEEEccHHHHHHhCCccccccceeecCCCCCeEEE
Confidence 3567899999999999999996 899999999999999999999999999999998 679999
Q ss_pred EEEeecCCCeE-EecCCCccCCCCCCCCCCccHHHHHHHHHhcccCCccccceeccc
Q 038292 63 GTIYSVRYDGE-MYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKSHLDALRIE 118 (122)
Q Consensus 63 ~~F~~p~~d~~-i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~g~~~ld~~~i~ 118 (122)
+||++|+.|+. +.|+++|++.++|++|++++++||+..++.+...+++.++.++|.
T Consensus 303 ~~F~~P~~d~~v~~pl~~~v~~~~p~~y~p~~~~eyl~~~~~~~~~~~~~~~~~~~~ 359 (360)
T PLN03178 303 AVFCEPPKEKIILKPLPELVSKEEPPKFPPRTFGQHVSHKLFKKPQDERNIDAADIS 359 (360)
T ss_pred EEEecCCcccccccCcHHHcCCCCcccCCCccHHHHHHHHHhcccCcchhHhHHhcc
Confidence 99999999975 599999999889999999999999999999988899999999885
No 10
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=100.00 E-value=5.4e-36 Score=233.25 Aligned_cols=118 Identities=31% Similarity=0.644 Sum_probs=107.0
Q ss_pred CCccccccccccCCceeEEEecCCCCceEEEECCeEEEecCCCCeEEEEeccceee------------------eceeeE
Q 038292 1 PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET------------------HWRLSI 62 (122)
Q Consensus 1 pe~~~g~~~HtD~~~lTll~qd~~v~GLqV~~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~Si 62 (122)
|+..+|+++|||+|+||||+||++++||||+++|+|++|+|.+|++|||+||+||+ .+|||+
T Consensus 171 ~~~~~G~~~HTD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pg~lvVNiGD~l~~~Tng~~kS~~HRVv~~~~~~R~Si 250 (321)
T PLN02299 171 PDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVVAQTDGNRMSI 250 (321)
T ss_pred cccccCccCccCCCeEEEEEecCCCCCcCcccCCeEEECCCCCCeEEEEeCHHHHHHhCCceecccceeecCCCCCEEEE
Confidence 35578999999999999999964699999999999999999999999999999998 679999
Q ss_pred EEEeecCCCeEEecCCCccCCC--CCCCCCCccHHHHHHHHHhcccCCc-cccceeccc
Q 038292 63 GTIYSVRYDGEMYPASNLVSEN--TPPLFKRVTVEEYFGNLCARKLRGK-SHLDALRIE 118 (122)
Q Consensus 63 ~~F~~p~~d~~i~pl~~~v~~~--~p~~y~~~~~~e~~~~~~~~~~~g~-~~ld~~~i~ 118 (122)
+||++|+.|++|+|+++|++.+ +|++|++++++||++.+.++...++ ..++.+|+.
T Consensus 251 ~~F~~p~~d~~i~pl~~~v~~~~~~p~~y~p~~~~e~l~~~~~~~~~~~~~~~~~~~~~ 309 (321)
T PLN02299 251 ASFYNPGSDAVIYPAPALVEKEAEEEQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKAM 309 (321)
T ss_pred EEEecCCCCceEeCchHhcCcccCCCcCCCCCcHHHHHHHHHHcccCCccchhhhhhcc
Confidence 9999999999999999999865 5899999999999999999877775 668888774
No 11
>PLN02904 oxidoreductase
Probab=100.00 E-value=9.7e-36 Score=234.67 Aligned_cols=117 Identities=27% Similarity=0.553 Sum_probs=109.3
Q ss_pred CCccccccccccCCceeEEEecCCCCceEEEE-CCeEEEecCCCCeEEEEeccceee------------------eceee
Q 038292 1 PEKVVGLSTHSDDSALAILLEINEVEGLQIKK-DGKWIHITPFPNAFVVNVGNVLET------------------HWRLS 61 (122)
Q Consensus 1 pe~~~g~~~HtD~~~lTll~qd~~v~GLqV~~-~g~W~~v~p~~~~~vvniGd~le~------------------~~R~S 61 (122)
|+.++|+++|||+|+||||+|+ ++||||+. +|+|++|+|.||+|||||||+||+ .+|||
T Consensus 221 ~~~~~g~~~HtD~g~lTlL~qd--~~GLQV~~~~g~Wi~V~p~pgalVVNiGD~Le~~TNG~~kSt~HRVv~~~~~~R~S 298 (357)
T PLN02904 221 PEIALGMPPHSDFGSLTILLQS--SQGLQIMDCNKNWVCVPYIEGALIVQLGDQVEVMSNGIYKSVVHRVTVNKDYKRLS 298 (357)
T ss_pred cccccCCcCccCCCceEEEecC--CCeeeEEeCCCCEEECCCCCCeEEEEccHHHHHHhCCeeeccCCcccCCCCCCEEE
Confidence 4568999999999999999995 48999995 799999999999999999999999 78999
Q ss_pred EEEEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhcccCCccccceecccc
Q 038292 62 IGTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKSHLDALRIEH 119 (122)
Q Consensus 62 i~~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~g~~~ld~~~i~~ 119 (122)
++||++|+.|+.|+|+++|+++++|++|++++|+||++.+.++..++++.++.++++.
T Consensus 299 i~~F~~p~~d~~i~Pl~~~v~~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PLN02904 299 FASLHSLPLHKKISPAPELVNENKPAAYGEFSFNDFLDYISSNDITQERFIDTLKKNN 356 (357)
T ss_pred EEEeecCCCCCeEeCCHHHcCCCCCCcCCCCCHHHHHHHHHhcccCcchHHHHhccCC
Confidence 9999999999999999999999999999999999999999999998999999888753
No 12
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=100.00 E-value=1.5e-35 Score=233.63 Aligned_cols=113 Identities=35% Similarity=0.682 Sum_probs=103.1
Q ss_pred CCccccccccccCCceeEEEecCCCCceEEEECC-eEEEecCCCCeEEEEeccceee------------------eceee
Q 038292 1 PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDG-KWIHITPFPNAFVVNVGNVLET------------------HWRLS 61 (122)
Q Consensus 1 pe~~~g~~~HtD~~~lTll~qd~~v~GLqV~~~g-~W~~v~p~~~~~vvniGd~le~------------------~~R~S 61 (122)
|+.++|+++|||+|+||||+|| +++||||+++| +|++|+|.||++||||||+||+ ++|||
T Consensus 223 ~~~~~G~~~HtD~g~lTiL~Qd-~v~GLQV~~~~~~Wi~V~p~pgalVVNiGD~lq~~SNg~~kS~~HRVv~~~~~~R~S 301 (358)
T PLN02254 223 PDRAMGLAPHTDSSLLTILYQS-NTSGLQVFREGVGWVTVPPVPGSLVVNVGDLLHILSNGRFPSVLHRAVVNKTRHRIS 301 (358)
T ss_pred cccccCcCCccCCCcEEEEecC-CCCCceEECCCCEEEEcccCCCCEEEEhHHHHHHHhCCeeccccceeecCCCCCEEE
Confidence 4678999999999999999996 89999999765 8999999999999999999998 78999
Q ss_pred EEEEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhcccCCccccceecc
Q 038292 62 IGTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKSHLDALRI 117 (122)
Q Consensus 62 i~~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~g~~~ld~~~i 117 (122)
++||++|+.|++|+|+++|++.++|++|++++++||+..+++.... .++.+++
T Consensus 302 ia~F~~P~~d~~i~pl~~lv~~~~p~~Y~~~t~~ey~~~~~~~~~~---~~~~~~~ 354 (358)
T PLN02254 302 VAYFYGPPSDVQISPLPKLVDPNHPPLYRSVTWKEYLATKAKHFNK---ALSLIRN 354 (358)
T ss_pred EEEEecCCCCcEEeCcHHhcCCCCCcccCCcCHHHHHHHHHHhhhh---hhhhhhc
Confidence 9999999999999999999999899999999999999998877655 4555554
No 13
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=100.00 E-value=7.6e-35 Score=224.91 Aligned_cols=114 Identities=26% Similarity=0.467 Sum_probs=103.5
Q ss_pred CccccccccccCCceeEEEecCCCCceEEEE--CCeEEEecCCCCeEEEEeccceee------------------eceee
Q 038292 2 EKVVGLSTHSDDSALAILLEINEVEGLQIKK--DGKWIHITPFPNAFVVNVGNVLET------------------HWRLS 61 (122)
Q Consensus 2 e~~~g~~~HtD~~~lTll~qd~~v~GLqV~~--~g~W~~v~p~~~~~vvniGd~le~------------------~~R~S 61 (122)
+..+|+++|||+|+||||+||++++||||+. +|+|++|+|.||++|||+||+||+ .+|||
T Consensus 163 ~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~~~~~g~Wi~V~p~pga~vVNiGD~l~~~TNG~~~St~HRVv~~~~~~R~S 242 (300)
T PLN02365 163 VGSSGVQIHTDSGFLTILQDDENVGGLEVMDPSSGEFVPVDPLPGTLLVNLGDVATAWSNGRLCNVKHRVQCKEATMRIS 242 (300)
T ss_pred cccccccCccCCCceEEEecCCCcCceEEEECCCCeEEecCCCCCeEEEEhhHHHHHHhCCceecccceeEcCCCCCEEE
Confidence 4678999999999999999963599999985 689999999999999999999998 67999
Q ss_pred EEEEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhcccCCcccccee
Q 038292 62 IGTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKSHLDAL 115 (122)
Q Consensus 62 i~~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~g~~~ld~~ 115 (122)
++||+.|+.|++|+|+++|++.++|++|++++++||+..+..+...+...+..+
T Consensus 243 i~~F~~p~~d~~i~p~~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~~~~~~~~~ 296 (300)
T PLN02365 243 IASFLLGPKDDDVEAPPEFVDAEHPRLYKPFTYEDYRKLRLSTKLHAGEALALI 296 (300)
T ss_pred EEEEecCCCCCeEeCCHHHcCCCCCccCCCccHHHHHHHHHhccccccchHhhh
Confidence 999999999999999999999889999999999999999998877666655544
No 14
>PLN02704 flavonol synthase
Probab=100.00 E-value=1.1e-34 Score=226.87 Aligned_cols=102 Identities=30% Similarity=0.555 Sum_probs=97.3
Q ss_pred CCccccccccccCCceeEEEecCCCCceEEEECCeEEEecCCCCeEEEEeccceee------------------eceeeE
Q 038292 1 PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET------------------HWRLSI 62 (122)
Q Consensus 1 pe~~~g~~~HtD~~~lTll~qd~~v~GLqV~~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~Si 62 (122)
|+.++|+++|||+|+||||+|| +++||||+++|+|++|+|.+|++|||+||+||+ .+|||+
T Consensus 212 ~~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~g~Wi~V~p~pg~lvVNvGD~L~~~TNg~~kSt~HRVv~~~~~~R~Si 290 (335)
T PLN02704 212 PDLALGVVAHTDMSAITILVPN-EVQGLQVFRDDHWFDVKYIPNALVIHIGDQIEILSNGKYKSVLHRTTVNKEKTRMSW 290 (335)
T ss_pred cccccCccCccCCcceEEEecC-CCCceeEeECCEEEeCCCCCCeEEEEechHHHHHhCCeeecccceeecCCCCCeEEE
Confidence 3567899999999999999996 899999999999999999999999999999998 789999
Q ss_pred EEEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHh
Q 038292 63 GTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCA 103 (122)
Q Consensus 63 ~~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~ 103 (122)
+||++|+.|++|+|+++|++.++|++|++++++||+..+++
T Consensus 291 ~~F~~p~~d~~i~pl~~~~~~~~p~~Y~~~~~~e~~~~~~~ 331 (335)
T PLN02704 291 PVFLEPPSELAVGPLPKLINEDNPPKFKTKKFKDYVYCKLN 331 (335)
T ss_pred EEEecCCCCceEeCChHhcCCCCCccCCCCCHHHHHHHHHh
Confidence 99999999999999999999999999999999999998876
No 15
>PLN02997 flavonol synthase
Probab=100.00 E-value=1.3e-34 Score=225.90 Aligned_cols=102 Identities=31% Similarity=0.503 Sum_probs=96.8
Q ss_pred CccccccccccCCceeEEEecCCCCceEEEECCeEEEecCCCCeEEEEeccceee------------------eceeeEE
Q 038292 2 EKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET------------------HWRLSIG 63 (122)
Q Consensus 2 e~~~g~~~HtD~~~lTll~qd~~v~GLqV~~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~Si~ 63 (122)
+..+|+++|||+|+||||+|| +++||||+++|+|++|+|.+|++|||+||+||+ ..|||++
T Consensus 197 ~~~~g~~~HTD~g~lTlL~Qd-~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~Le~~TNG~~kSt~HRVv~~~~~~R~Si~ 275 (325)
T PLN02997 197 ELVIGAAAHSDMGAIALLIPN-EVPGLQAFKDEQWLDLNYINSAVVVIIGDQLMRMTNGRFKNVLHRAKTDKERLRISWP 275 (325)
T ss_pred ccccCccCccCCCceEEEecC-CCCCEEEeECCcEEECCCCCCeEEEEechHHHHHhCCccccccceeeCCCCCCEEEEE
Confidence 467899999999999999996 899999999999999999999999999999998 5699999
Q ss_pred EEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhc
Q 038292 64 TIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCAR 104 (122)
Q Consensus 64 ~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~ 104 (122)
||++|+.|++|+|+++|++.++|++|++++++||+..+++.
T Consensus 276 fF~~P~~d~~i~Plp~~v~~~~p~~y~~~~~~e~l~~r~~~ 316 (325)
T PLN02997 276 VFVAPRADMSVGPLPELTGDENPPKFETLIYNDYIDQKIRG 316 (325)
T ss_pred EEecCCCCCeEeCChHHcCCCCCCcCCCccHHHHHHHHHhh
Confidence 99999999999999999999999999999999999988763
No 16
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=100.00 E-value=2e-34 Score=224.59 Aligned_cols=113 Identities=42% Similarity=0.728 Sum_probs=104.9
Q ss_pred CCccccccccccCCceeEEEecCCCCceEEE-ECCeEEEecCCCCeEEEEeccceee------------------eceee
Q 038292 1 PEKVVGLSTHSDDSALAILLEINEVEGLQIK-KDGKWIHITPFPNAFVVNVGNVLET------------------HWRLS 61 (122)
Q Consensus 1 pe~~~g~~~HtD~~~lTll~qd~~v~GLqV~-~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~S 61 (122)
||.++|+++|||.++||+|+||++++||||. ++|+|++|+|.|++|||||||+||+ +.|+|
T Consensus 189 pe~~lGl~~HtD~~~lTiLlqd~~V~GLQv~~~dg~Wi~V~P~p~a~vVNiGD~l~~lSNG~ykSv~HRV~~n~~~~R~S 268 (322)
T KOG0143|consen 189 PELTLGLGAHTDKSFLTILLQDDDVGGLQVFTKDGKWIDVPPIPGAFVVNIGDMLQILSNGRYKSVLHRVVVNGEKERIS 268 (322)
T ss_pred ccccccccCccCcCceEEEEccCCcCceEEEecCCeEEECCCCCCCEEEEcccHHhHhhCCcccceEEEEEeCCCCceEE
Confidence 7889999999999999999997689999999 5999999999999999999999999 56999
Q ss_pred EEEEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhcccCCccccce
Q 038292 62 IGTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKSHLDA 114 (122)
Q Consensus 62 i~~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~g~~~ld~ 114 (122)
+|+|+.|..|.+|.|++++++.+ |++|+++++.+|++.+..+...++..++.
T Consensus 269 ia~F~~p~~d~~i~p~~elv~~~-~~~Y~~~~~~~y~~~~~~~~~~~~~~~~~ 320 (322)
T KOG0143|consen 269 VAFFVFPPLDKVIGPPEELVDEE-PPKYKPFTFGDYLEFYFSKKLQGKTLLDY 320 (322)
T ss_pred EEEEecCCCCceecChhhhCCCC-CCccCcEEHHHHHHHHHhccccCcchhhh
Confidence 99999999999999999998877 88899999999999999988887665554
No 17
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=100.00 E-value=2.5e-34 Score=225.05 Aligned_cols=104 Identities=28% Similarity=0.442 Sum_probs=98.3
Q ss_pred ccccccccccCCceeEEEecCCCCceEEE-ECCeEEEecCCCCeEEEEeccceee------------------eceeeEE
Q 038292 3 KVVGLSTHSDDSALAILLEINEVEGLQIK-KDGKWIHITPFPNAFVVNVGNVLET------------------HWRLSIG 63 (122)
Q Consensus 3 ~~~g~~~HtD~~~lTll~qd~~v~GLqV~-~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~Si~ 63 (122)
..+|+++|||+|+||||+|| +++||||+ ++|+|++|+|.+|+||||+||+||+ ++|||++
T Consensus 195 ~~~g~~~HTD~g~lTlL~Qd-~v~GLQV~~~~g~Wi~Vpp~pga~VVNiGD~l~~wTNg~~kSt~HRVv~~~~~~R~Sia 273 (335)
T PLN02156 195 VEIGFGEHTDPQLISLLRSN-DTAGLQICVKDGTWVDVPPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTKRSRISMI 273 (335)
T ss_pred cccCCCCccCCCceEEEEeC-CCCceEEEeCCCCEEEccCCCCcEEEEhHHHHHHHhCCeeeccceeeecCCCCCEEEEE
Confidence 46899999999999999996 89999998 7999999999999999999999998 6799999
Q ss_pred EEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhcccC
Q 038292 64 TIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLR 107 (122)
Q Consensus 64 ~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~ 107 (122)
||++|+.|++|+|+++|++.++|++|++++++||+..+.++...
T Consensus 274 fF~~P~~d~~i~pl~~~v~~~~p~~y~p~~~~ey~~~~~~~~~~ 317 (335)
T PLN02156 274 YFAGPPLSEKIAPLSCLVPKQDDCLYNEFTWSQYKLSAYKTKLG 317 (335)
T ss_pred EeecCCCCCEEeCChHhcCCCCCccCCCccHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999887654
No 18
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=4.5e-34 Score=224.53 Aligned_cols=111 Identities=37% Similarity=0.631 Sum_probs=96.9
Q ss_pred CccccccccccCCceeEEEecCCCCceEEEECCeEEEecCCCCeEEEEeccceee------------------eceeeEE
Q 038292 2 EKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET------------------HWRLSIG 63 (122)
Q Consensus 2 e~~~g~~~HtD~~~lTll~qd~~v~GLqV~~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~Si~ 63 (122)
+.++|+++|||+|+||||+||++++||||+++|+|++|+|.+|++||||||+||+ .+|||++
T Consensus 217 ~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pg~lVVNiGD~Le~~Tng~~kSt~HRVv~~~~~~R~Si~ 296 (348)
T PLN00417 217 DKVIGVKPHADGSAFTLLLPDKDVEGLQFLKDGKWYKAPIVPDTILINVGDQMEIMSNGIYKSPVHRVVTNREKERISVA 296 (348)
T ss_pred ccccCCcCccCCCceEEEEecCCCCceeEeECCeEEECCCCCCcEEEEcChHHHHHhCCeecccceEEecCCCCCEEEEE
Confidence 5678999999999999999964699999999999999999999999999999998 6799999
Q ss_pred EEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhcccCCccccce
Q 038292 64 TIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKSHLDA 114 (122)
Q Consensus 64 ~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~g~~~ld~ 114 (122)
||++|+.|++|+|+++++++++|++|++++ +|+..+++...+++.+++.
T Consensus 297 fF~~P~~d~~i~pl~~~v~~~~p~~Y~~~~--~~~~~~~~~~~~~~~~~~~ 345 (348)
T PLN00417 297 TFCIPGADKEIQPVDGLVSEARPRLYKTVK--KYVELFFKYYQQGRRPIEA 345 (348)
T ss_pred EEecCCCCceecCchHhcCCCCCCCCCCHH--HHHHHHHHHHhcCcchhhh
Confidence 999999999999999999988999999999 4444444444445555543
No 19
>PLN02485 oxidoreductase
Probab=100.00 E-value=4e-34 Score=223.08 Aligned_cols=105 Identities=26% Similarity=0.538 Sum_probs=97.1
Q ss_pred CccccccccccCCceeEEEecCCCCceEEE-ECCeEEEecCCCCeEEEEeccceee------------------eceeeE
Q 038292 2 EKVVGLSTHSDDSALAILLEINEVEGLQIK-KDGKWIHITPFPNAFVVNVGNVLET------------------HWRLSI 62 (122)
Q Consensus 2 e~~~g~~~HtD~~~lTll~qd~~v~GLqV~-~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~Si 62 (122)
+.++|+++|||+|+||||+||++++||||+ ++|+|++|+|.+|++||||||+|++ ++|||+
T Consensus 202 ~~~~g~~~HTD~g~lTlL~qd~~~~GLqV~~~~g~Wi~V~p~pg~~vVNiGD~L~~~TnG~~~St~HRVv~~~~~~R~Si 281 (329)
T PLN02485 202 ENDIGCGAHTDYGLLTLVNQDDDITALQVRNLSGEWIWAIPIPGTFVCNIGDMLKIWSNGVYQSTLHRVINNSPKYRVCV 281 (329)
T ss_pred ccCcccccccCCCeEEEEeccCCCCeeeEEcCCCcEEECCCCCCcEEEEhHHHHHHHHCCEeeCCCceecCCCCCCeEEE
Confidence 457899999999999999996468999998 6899999999999999999999998 789999
Q ss_pred EEEeecCCCeEEecCCCccC--CCCCCCCCCccHHHHHHHHHhccc
Q 038292 63 GTIYSVRYDGEMYPASNLVS--ENTPPLFKRVTVEEYFGNLCARKL 106 (122)
Q Consensus 63 ~~F~~p~~d~~i~pl~~~v~--~~~p~~y~~~~~~e~~~~~~~~~~ 106 (122)
+||++|+.|++|+|+++|++ .++|++|++++++||+..++.+.+
T Consensus 282 ~~F~~p~~d~~i~pl~~~~~~~~~~~~~y~~~t~~e~~~~~~~~~~ 327 (329)
T PLN02485 282 AFFYETNFDAAVEPLDICKEKRTGGSQVFKRVVYGEHLVNKVLTNF 327 (329)
T ss_pred EEEecCCCCceeecchhhcccccCCCCCCCcEeHHHHHHHHHHHhh
Confidence 99999999999999999987 567899999999999999987653
No 20
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=100.00 E-value=1.1e-33 Score=223.01 Aligned_cols=105 Identities=34% Similarity=0.582 Sum_probs=95.2
Q ss_pred CCccccccccccCCceeEEEecCCCCceEEEECC--eEEEecCCCCeEEEEeccceee------------------ecee
Q 038292 1 PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDG--KWIHITPFPNAFVVNVGNVLET------------------HWRL 60 (122)
Q Consensus 1 pe~~~g~~~HtD~~~lTll~qd~~v~GLqV~~~g--~W~~v~p~~~~~vvniGd~le~------------------~~R~ 60 (122)
||.++|+++|||+|+||||+|| +++||||++++ +|++|+|.||+||||+||+||+ .+||
T Consensus 208 ~~~~~G~~~HTD~g~lTlL~Qd-~v~GLQV~~~~~~~Wi~Vpp~pgalVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~ 286 (358)
T PLN02515 208 PDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNCSRL 286 (358)
T ss_pred hhhccCCCCCCCCCeEEEEecC-CCCceEEEECCCCeEEECCCCCCeEEEEccHHHHHHhCCeeeeecceEECCCCCCEE
Confidence 4678999999999999999996 89999998643 7999999999999999999998 7799
Q ss_pred eEEEEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhcccC
Q 038292 61 SIGTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLR 107 (122)
Q Consensus 61 Si~~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~ 107 (122)
|++||++|+.|++|+|++ ++.+++|++|++++++||+..++.+...
T Consensus 287 Si~~F~~P~~d~~i~Pl~-~~~~~~p~~y~~~t~~eyl~~~~~~~~~ 332 (358)
T PLN02515 287 SIATFQNPAPDATVYPLK-VREGEKPILEEPITFAEMYRRKMSRDLE 332 (358)
T ss_pred EEEEEecCCCCCEEECCC-cCCCCCCCcCCCcCHHHHHHHHHhcccc
Confidence 999999999999999997 5666789999999999999999876544
No 21
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.4e-33 Score=221.43 Aligned_cols=104 Identities=31% Similarity=0.616 Sum_probs=97.3
Q ss_pred CccccccccccCCceeEEEecCCCCceEEE--ECCeEEEecCCCCeEEEEeccceee------------------eceee
Q 038292 2 EKVVGLSTHSDDSALAILLEINEVEGLQIK--KDGKWIHITPFPNAFVVNVGNVLET------------------HWRLS 61 (122)
Q Consensus 2 e~~~g~~~HtD~~~lTll~qd~~v~GLqV~--~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~S 61 (122)
+..+|+++|||+|+||||+|| +++||||+ .+|+|++|+|.+|++|||+||+|++ .+|||
T Consensus 207 ~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~~~g~Wi~V~p~pg~~vVNiGD~L~~~Tng~~~St~HRVv~~~~~~R~S 285 (345)
T PLN02750 207 HLALGVGRHKDGGALTVLAQD-DVGGLQISRRSDGEWIPVKPIPDAFIINIGNCMQVWTNDLYWSAEHRVVVNSQKERFS 285 (345)
T ss_pred ccccCcCCCCCCCeEEEEecC-CCCceEEeecCCCeEEEccCCCCeEEEEhHHHHHHHhCCeeecccceeccCCCCCEEE
Confidence 467899999999999999996 89999997 4899999999999999999999998 78999
Q ss_pred EEEEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhccc
Q 038292 62 IGTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKL 106 (122)
Q Consensus 62 i~~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~~ 106 (122)
++||++|+.|++|+|++++++.++|++|++++++||+..++....
T Consensus 286 i~~F~~P~~d~~i~pl~~~v~~~~p~~y~p~~~~e~~~~~~~~~~ 330 (345)
T PLN02750 286 IPFFFFPSHYVNIKPLDELINEQNPPKYKEFNWGKFFASRNRSDY 330 (345)
T ss_pred EEEeecCCCCCeecCcHHhcCCCCCCccCCccHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999998877653
No 22
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.7e-33 Score=220.08 Aligned_cols=105 Identities=27% Similarity=0.341 Sum_probs=97.2
Q ss_pred ccccccccccCCceeEEEecCCCCceEEEE-----CCeEEEecCCCCeEEEEeccceee-----------------ecee
Q 038292 3 KVVGLSTHSDDSALAILLEINEVEGLQIKK-----DGKWIHITPFPNAFVVNVGNVLET-----------------HWRL 60 (122)
Q Consensus 3 ~~~g~~~HtD~~~lTll~qd~~v~GLqV~~-----~g~W~~v~p~~~~~vvniGd~le~-----------------~~R~ 60 (122)
..+|+++|||+|+||||+|| +++||||+. +|+|++|+|.||+|||||||+|++ .+||
T Consensus 198 ~~~g~~~HTD~g~lTlL~qd-~v~GLQV~~~~~~~~g~Wi~Vpp~pg~~VVNiGD~L~~wTng~~kSt~HRVv~~~~~R~ 276 (332)
T PLN03002 198 GIYACGAHSDFGMMTLLATD-GVMGLQICKDKNAMPQKWEYVPPIKGAFIVNLGDMLERWSNGFFKSTLHRVLGNGQERY 276 (332)
T ss_pred CccccccccCCCeEEEEeeC-CCCceEEecCCCCCCCcEEECCCCCCeEEEEHHHHHHHHhCCeeECcCCeecCCCCCee
Confidence 36899999999999999996 899999985 368999999999999999999998 6899
Q ss_pred eEEEEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhcccCC
Q 038292 61 SIGTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRG 108 (122)
Q Consensus 61 Si~~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~g 108 (122)
|++||++|+.|++|+|+++|+++++|++|++++++||+..++.....+
T Consensus 277 Sia~F~~p~~d~~i~pl~~~~~~~~p~~y~~~~~~e~l~~~~~~~~~~ 324 (332)
T PLN03002 277 SIPFFVEPNHDCLVECLPTCKSESDLPKYPPIKCSTYLTQRYEETHAK 324 (332)
T ss_pred EEEEEecCCCCeeEecCCcccCCCCcccCCCccHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999998876443
No 23
>PTZ00273 oxidase reductase; Provisional
Probab=100.00 E-value=2e-33 Score=218.37 Aligned_cols=104 Identities=24% Similarity=0.403 Sum_probs=97.6
Q ss_pred CccccccccccCCceeEEEecCCCCceEEE-ECCeEEEecCCCCeEEEEeccceee-----------------eceeeEE
Q 038292 2 EKVVGLSTHSDDSALAILLEINEVEGLQIK-KDGKWIHITPFPNAFVVNVGNVLET-----------------HWRLSIG 63 (122)
Q Consensus 2 e~~~g~~~HtD~~~lTll~qd~~v~GLqV~-~~g~W~~v~p~~~~~vvniGd~le~-----------------~~R~Si~ 63 (122)
+.++|+++|||+|+||||+|| .++||||+ ++|+|++|+|.+|++|||+||+||+ .+|||++
T Consensus 192 ~~~~g~~~HTD~g~lTlL~qd-~~~GLqV~~~~g~Wi~V~p~pg~lvVNvGD~l~~~TnG~~kSt~HRVv~~~~~R~Si~ 270 (320)
T PTZ00273 192 KGRTVCGEHTDYGIITLLYQD-SVGGLQVRNLSGEWMDVPPLEGSFVVNIGDMMEMWSNGRYRSTPHRVVNTGVERYSMP 270 (320)
T ss_pred ccCcccccccCCCeEEEEecC-CCCceEEECCCCCEEeCCCCCCeEEEEHHHHHHHHHCCeeeCCCccccCCCCCeEEEE
Confidence 357899999999999999996 89999998 6899999999999999999999998 6899999
Q ss_pred EEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhccc
Q 038292 64 TIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKL 106 (122)
Q Consensus 64 ~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~~ 106 (122)
||++|+.|++|+|+++|++.++|++|++++++||+..++.+.+
T Consensus 271 ~F~~p~~d~~i~pl~~~~~~~~~~~y~~~~~~e~~~~~~~~~~ 313 (320)
T PTZ00273 271 FFCEPNPNVIIKCLDNCHSEENPPKYPPVRAVDWLLKRFAETY 313 (320)
T ss_pred EEEcCCCCceEecCccccCCCCcccCCceeHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999887653
No 24
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=99.97 E-value=6.4e-32 Score=211.92 Aligned_cols=106 Identities=26% Similarity=0.433 Sum_probs=94.5
Q ss_pred CccccccccccCCceeEEEecCCCCceEEEECCeEEEecCCCCeEEEEeccceee-------------------eceeeE
Q 038292 2 EKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET-------------------HWRLSI 62 (122)
Q Consensus 2 e~~~g~~~HtD~~~lTll~qd~~v~GLqV~~~g~W~~v~p~~~~~vvniGd~le~-------------------~~R~Si 62 (122)
+..+|+++|||+|+||||+|| +++||||+++|+|++|+|.||++|||+||+||+ ++|||+
T Consensus 214 ~~~~g~~aHTD~g~lTlL~Qd-~v~GLQV~~~g~Wv~V~p~pgalVVNiGD~Le~wTNg~~kSt~HRVv~~~~~~~R~Si 292 (341)
T PLN02984 214 AEAPGMEVHTDSSVISILNQD-EVGGLEVMKDGEWFNVKPIANTLVVNLGDMMQVISDDEYKSVLHRVGKRNKKKERYSI 292 (341)
T ss_pred ccccCccCccCCCceEEEEeC-CCCCeeEeeCCceEECCCCCCeEEEECChhhhhhcCCeeeCCCCccccCCCCCCeEEE
Confidence 457899999999999999996 899999999999999999999999999999998 679999
Q ss_pred EEEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhcccCC--ccccceeccc
Q 038292 63 GTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRG--KSHLDALRIE 118 (122)
Q Consensus 63 ~~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~g--~~~ld~~~i~ 118 (122)
+||++|+.|++|+ |++|++++++||+..+......+ +..++.+|++
T Consensus 293 a~F~~P~~d~~i~----------p~~y~p~t~~e~l~~~~~~~~~~~~~~~~~~~~~~ 340 (341)
T PLN02984 293 CYFVFPEEDCVIK----------SSKYKPFTYSDFEAQVQLDVKTLGSKVGLSRFKSN 340 (341)
T ss_pred EEEecCCCCCEEc----------cCCcCcccHHHHHHHHHhhhhccCCcccccceecC
Confidence 9999999999996 36999999999999888655443 3337888875
No 25
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=99.97 E-value=7e-32 Score=208.79 Aligned_cols=110 Identities=32% Similarity=0.505 Sum_probs=96.9
Q ss_pred CccccccccccCCceeEEEecCCCCceEEEECCeEEEecCCC-CeEEEEeccceee------------------eceeeE
Q 038292 2 EKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFP-NAFVVNVGNVLET------------------HWRLSI 62 (122)
Q Consensus 2 e~~~g~~~HtD~~~lTll~qd~~v~GLqV~~~g~W~~v~p~~-~~~vvniGd~le~------------------~~R~Si 62 (122)
+.++|+++|||+|+||||+|++.++||||+++|+|++|+|.+ +++|||+||+|++ .+|||+
T Consensus 167 ~~~~G~~~HtD~g~lTlL~q~~~v~GLqV~~~g~Wi~V~p~p~~~lvVNvGD~L~~~Tng~~~S~~HRVv~~~~~~R~Si 246 (303)
T PLN02403 167 ELVRGLREHTDAGGIILLLQDDQVPGLEFLKDGKWVPIPPSKNNTIFVNTGDQLEVLSNGRYKSTLHRVMADKNGSRLSI 246 (303)
T ss_pred ccccCccCccCCCeEEEEEecCCCCceEeccCCeEEECCCCCCCEEEEEehHHHHHHhCCeeecccceeecCCCCCEEEE
Confidence 556899999999999999996459999999999999999999 6999999999998 679999
Q ss_pred EEEeecCCCeEEecCCCccCCCCCCCCC-CccHHHHHHHHHhc-ccCCccccceeccc
Q 038292 63 GTIYSVRYDGEMYPASNLVSENTPPLFK-RVTVEEYFGNLCAR-KLRGKSHLDALRIE 118 (122)
Q Consensus 63 ~~F~~p~~d~~i~pl~~~v~~~~p~~y~-~~~~~e~~~~~~~~-~~~g~~~ld~~~i~ 118 (122)
+||++|+.|++|+|+++++. + +++++||++.+.+. ...+++.++.+|+.
T Consensus 247 ~~F~~p~~d~~i~pl~~~~~-------~~~~~~~eyl~~~~~~~~~~~~~~~~~~~~~ 297 (303)
T PLN02403 247 ATFYNPAGDAIISPAPKLLY-------PSNYRFQDYLKLYSTTKFGDKGPRFESMKKM 297 (303)
T ss_pred EEEEcCCCCCeEeCchhhCC-------CCCccHHHHHHHHHHhccccccchHHHhhhh
Confidence 99999999999999998853 3 49999999998874 34457778888874
No 26
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=99.94 E-value=2.3e-27 Score=181.95 Aligned_cols=90 Identities=30% Similarity=0.551 Sum_probs=79.2
Q ss_pred CccccccccccCCceeEEEecCCCCceEEEE-CCeEEEecCCCCeEEEEeccceee------------------eceeeE
Q 038292 2 EKVVGLSTHSDDSALAILLEINEVEGLQIKK-DGKWIHITPFPNAFVVNVGNVLET------------------HWRLSI 62 (122)
Q Consensus 2 e~~~g~~~HtD~~~lTll~qd~~v~GLqV~~-~g~W~~v~p~~~~~vvniGd~le~------------------~~R~Si 62 (122)
+..-|.|+|||+|+||||+|| +++||||+. .|+|++|+|.||++|||+||+||+ .+||||
T Consensus 188 ~~~~~~GaHtD~G~lTLl~Qd-~~~GLqv~~~~g~Wl~v~P~pgtlvVNiGdmLe~~Tng~lrST~HRV~~~~~~~R~Si 266 (322)
T COG3491 188 EGADGVGAHTDYGLLTLLFQD-DVGGLEVRPPNGGWLDVPPIPGTLVVNIGDMLERWTNGRLRSTVHRVRNPPGVDRYSI 266 (322)
T ss_pred ccccccccccCCCeEEEEEec-ccCCeEEecCCCCeeECCCCCCeEEEeHHHHHHHHhCCeeccccceeecCCCccceee
Confidence 345578999999999999997 999999995 599999999999999999999998 599999
Q ss_pred EEEeecCCCeEEecCCCc-cCCCCCCCCCCc
Q 038292 63 GTIYSVRYDGEMYPASNL-VSENTPPLFKRV 92 (122)
Q Consensus 63 ~~F~~p~~d~~i~pl~~~-v~~~~p~~y~~~ 92 (122)
+||+.|+.|+.|.|+.++ .+...++++...
T Consensus 267 pfF~~p~~Da~I~Pl~~l~~~~a~~~~~~~t 297 (322)
T COG3491 267 PFFLEPNFDAEIAPLLPLCPEAANEPRGPGT 297 (322)
T ss_pred eeeccCCCCccccccCCCCcccccCCcCCCC
Confidence 999999999999987644 455667777775
No 27
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.73 E-value=5.9e-18 Score=110.37 Aligned_cols=67 Identities=42% Similarity=0.772 Sum_probs=56.0
Q ss_pred CCccccccccccC--CceeEEEecCCCCceEEEECCeEEEecCCCCeEEEEeccceee------------------ecee
Q 038292 1 PEKVVGLSTHSDD--SALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET------------------HWRL 60 (122)
Q Consensus 1 pe~~~g~~~HtD~--~~lTll~qd~~v~GLqV~~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~ 60 (122)
++...|+++|+|. +++|+|+|+ .++|||+...++|+.|++.++.++||+||+|++ ..|+
T Consensus 12 ~~~~~~~~~H~D~~~~~~Til~~~-~~~gL~~~~~~~~~~v~~~~~~~~v~~G~~l~~~t~g~~~~~~HrV~~~~~~~R~ 90 (98)
T PF03171_consen 12 PENGVGIGPHTDDEDGLLTILFQD-EVGGLQVRDDGEWVDVPPPPGGFIVNFGDALEILTNGRYPATLHRVVPPTEGERY 90 (98)
T ss_dssp CCGCEEEEEEEES--SSEEEEEET-STS-EEEEETTEEEE----TTCEEEEEBHHHHHHTTTSS----EEEE--STS-EE
T ss_pred cccCCceeCCCcCCCCeEEEEecc-cchheeccccccccCccCccceeeeeceeeeecccCCccCCceeeeEcCCCCCEE
Confidence 4677899999999 999999994 899999999999999999999999999998886 7899
Q ss_pred eEEEEeec
Q 038292 61 SIGTIYSV 68 (122)
Q Consensus 61 Si~~F~~p 68 (122)
|++||++|
T Consensus 91 s~~~f~~p 98 (98)
T PF03171_consen 91 SLTFFLRP 98 (98)
T ss_dssp EEEEEEE-
T ss_pred EEEEEECC
Confidence 99999987
No 28
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=94.29 E-value=0.15 Score=32.43 Aligned_cols=62 Identities=23% Similarity=0.301 Sum_probs=42.6
Q ss_pred cccccccC-----CceeEEEecC-C-----CCceEEEE----CCeEEEec-----CCCCeEEEEec-cceee-------e
Q 038292 6 GLSTHSDD-----SALAILLEIN-E-----VEGLQIKK----DGKWIHIT-----PFPNAFVVNVG-NVLET-------H 57 (122)
Q Consensus 6 g~~~HtD~-----~~lTll~qd~-~-----v~GLqV~~----~g~W~~v~-----p~~~~~vvniG-d~le~-------~ 57 (122)
.+++|+|. ..+|+|+.-+ . .+.|++.. ++....+. |.+|.+|+.-+ +.+-. .
T Consensus 11 ~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~~~~~~~~~~~~~~~~p~~g~~v~F~~~~~~H~v~~v~~~~ 90 (100)
T PF13640_consen 11 FFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSKDSDDVSREVEDFDIVPKPGRLVIFPSDNSLHGVTPVGEGG 90 (100)
T ss_dssp EEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS-TSSTCEEEGGGSEE-BTTEEEEEESCTCEEEEEEE-EES
T ss_pred EEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccccCCCcceEEEeccccCCCCEEEEEeCCCCeecCcccCCCC
Confidence 46899998 6899995543 2 24577763 35566666 99999999999 54433 7
Q ss_pred ceeeEEEEee
Q 038292 58 WRLSIGTIYS 67 (122)
Q Consensus 58 ~R~Si~~F~~ 67 (122)
.|+++.+|++
T Consensus 91 ~R~~l~~~~~ 100 (100)
T PF13640_consen 91 RRYSLTFWFH 100 (100)
T ss_dssp EEEEEEEEEE
T ss_pred CEEEEEEEEC
Confidence 7999998874
No 29
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=93.99 E-value=0.29 Score=35.10 Aligned_cols=62 Identities=11% Similarity=0.005 Sum_probs=45.7
Q ss_pred cccccccC----CceeEEEecC---CCCceEEEEC----CeEEEecCCCCeEEEEeccceee------------eceeeE
Q 038292 6 GLSTHSDD----SALAILLEIN---EVEGLQIKKD----GKWIHITPFPNAFVVNVGNVLET------------HWRLSI 62 (122)
Q Consensus 6 g~~~HtD~----~~lTll~qd~---~v~GLqV~~~----g~W~~v~p~~~~~vvniGd~le~------------~~R~Si 62 (122)
....|.|. ..+|++.--. ..+|+-+... .-=+.+.+.+|++++-.|-.+.. ..|+|+
T Consensus 86 ~t~~HrD~~~~~~~~~~~~t~~~gd~~~g~l~lp~~~~~~~g~~~~~~~GtVl~~~~~~~~Hgvtpv~~~~~~~~~R~sl 165 (171)
T PF12851_consen 86 CTHSHRDTHNMPNGYDVLCTLGRGDYDGGRLELPGLDPNILGVAFAYQPGTVLIFCAKRELHGVTPVESPNRNHGTRISL 165 (171)
T ss_pred CccceecCCCCCCCeEEEEecCCccccCceEeccccccccCCEEEecCCCcEEEEcccceeeecCcccCCCCCCCeEEEE
Confidence 45789998 7788877631 2355555533 13488899999999999987665 579999
Q ss_pred EEEee
Q 038292 63 GTIYS 67 (122)
Q Consensus 63 ~~F~~ 67 (122)
+||.+
T Consensus 166 vfy~h 170 (171)
T PF12851_consen 166 VFYQH 170 (171)
T ss_pred EEEeE
Confidence 99986
No 30
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=79.14 E-value=4.4 Score=26.02 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=22.6
Q ss_pred eEEEecCCCCeEEEEeccceee-------eceeeEEE
Q 038292 35 KWIHITPFPNAFVVNVGNVLET-------HWRLSIGT 64 (122)
Q Consensus 35 ~W~~v~p~~~~~vvniGd~le~-------~~R~Si~~ 64 (122)
.+..++|.+|.+||.=+.+.-. .+|+||+|
T Consensus 64 ~~~~~~p~~G~lvlFPs~l~H~v~p~~~~~~Risisf 100 (101)
T PF13759_consen 64 PYYIVEPEEGDLVLFPSWLWHGVPPNNSDEERISISF 100 (101)
T ss_dssp SEEEE---TTEEEEEETTSEEEE----SSS-EEEEEE
T ss_pred ceEEeCCCCCEEEEeCCCCEEeccCcCCCCCEEEEEc
Confidence 5888999999999999988766 68999987
No 31
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=74.21 E-value=17 Score=25.42 Aligned_cols=60 Identities=23% Similarity=0.247 Sum_probs=38.4
Q ss_pred ccccccCC--------ceeEEEecC--CCCc-eEEEECC--eEEEecCCCCeEEEEe-cc--ceee------eceeeEEE
Q 038292 7 LSTHSDDS--------ALAILLEIN--EVEG-LQIKKDG--KWIHITPFPNAFVVNV-GN--VLET------HWRLSIGT 64 (122)
Q Consensus 7 ~~~HtD~~--------~lTll~qd~--~v~G-LqV~~~g--~W~~v~p~~~~~vvni-Gd--~le~------~~R~Si~~ 64 (122)
..+|.|.. .+|+++.-+ ..+| |.+...+ ....|.|..|.+|+.- ++ .+.. ..|+++..
T Consensus 96 ~~~H~D~~~~~~~~~r~~T~~~yLn~~~~GG~~~f~~~~~~~~~~v~P~~G~~v~f~~~~~~~~H~v~pv~~G~r~~~~~ 175 (178)
T smart00702 96 YGPHVDNFEDDENGDRIATFLLYLNDVEEGGELVFPGLGLMVCATVKPKKGDLLFFPSGRGRSLHGVCPVTRGSRWAITG 175 (178)
T ss_pred ccCcCCCCCCCCCCCeEEEEEEEeccCCcCceEEecCCCCccceEEeCCCCcEEEEeCCCCCccccCCcceeCCEEEEEE
Confidence 57899965 578776632 2444 6665443 2568899999888765 32 3222 57888877
Q ss_pred Ee
Q 038292 65 IY 66 (122)
Q Consensus 65 F~ 66 (122)
++
T Consensus 176 W~ 177 (178)
T smart00702 176 WI 177 (178)
T ss_pred EE
Confidence 65
No 32
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=68.65 E-value=8.3 Score=28.41 Aligned_cols=32 Identities=13% Similarity=0.233 Sum_probs=26.7
Q ss_pred eEEEecCCCCeEEEEeccceee-------eceeeEEEEe
Q 038292 35 KWIHITPFPNAFVVNVGNVLET-------HWRLSIGTIY 66 (122)
Q Consensus 35 ~W~~v~p~~~~~vvniGd~le~-------~~R~Si~~F~ 66 (122)
.|+.+.|.+|.+|+.=+-++-. .+|+|++|=+
T Consensus 160 ~~~~v~P~~G~lvlFPS~L~H~v~p~~~~~~RISiSFNl 198 (201)
T TIGR02466 160 RFVYVPPQEGRVLLFESWLRHEVPPNESEEERISVSFNY 198 (201)
T ss_pred ccEEECCCCCeEEEECCCCceecCCCCCCCCEEEEEEee
Confidence 4888999999999988877655 7899999865
No 33
>COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes [Carbohydrate transport and metabolism / General function prediction only]
Probab=61.33 E-value=19 Score=26.85 Aligned_cols=36 Identities=17% Similarity=0.319 Sum_probs=27.4
Q ss_pred eEEEecCCCCceEEE--ECCeEEEecCCCCeEEEEeccc
Q 038292 17 AILLEINEVEGLQIK--KDGKWIHITPFPNAFVVNVGNV 53 (122)
Q Consensus 17 Tll~qd~~v~GLqV~--~~g~W~~v~p~~~~~vvniGd~ 53 (122)
.+++|+ ..+-..+. +.|.=+.|||.-++.++|+||-
T Consensus 115 ~m~v~~-~~G~~~v~~~~~Gd~iyVPp~~gH~t~N~Gd~ 152 (209)
T COG2140 115 RMLVQK-PEGEARVIAVRAGDVIYVPPGYGHYTINTGDE 152 (209)
T ss_pred EEEEEc-CCCcEEEEEecCCcEEEeCCCcceEeecCCCC
Confidence 456664 33445555 5689999999999999999985
No 34
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=55.69 E-value=59 Score=24.42 Aligned_cols=41 Identities=15% Similarity=0.037 Sum_probs=27.4
Q ss_pred CCceEEEE-CCeEEEecCCCCeEEEEeccceee------eceeeEEEEe
Q 038292 25 VEGLQIKK-DGKWIHITPFPNAFVVNVGNVLET------HWRLSIGTIY 66 (122)
Q Consensus 25 v~GLqV~~-~g~W~~v~p~~~~~vvniGd~le~------~~R~Si~~F~ 66 (122)
.+.|.+.. .|. ..|+|..|.+|+.-...+-. ..||++.+..
T Consensus 129 GGEl~~~~~~g~-~~Vkp~aG~~vlfps~~lH~v~pVt~G~R~~~~~Wi 176 (226)
T PRK05467 129 GGELVIEDTYGE-HRVKLPAGDLVLYPSTSLHRVTPVTRGVRVASFFWI 176 (226)
T ss_pred CCceEEecCCCc-EEEecCCCeEEEECCCCceeeeeccCccEEEEEecH
Confidence 44477763 343 67888899988887766544 6677766554
No 35
>PF06560 GPI: Glucose-6-phosphate isomerase (GPI); InterPro: IPR010551 This entry consists of several bacterial and archaeal glucose-6-phosphate isomerase (GPI) proteins (5.3.1.9 from EC), which are involved in glycolysis and in gluconeogenesis and catalyse the conversion of D-glucose 6-phosphate to D-fructose 6-phosphate. The deduced amino acid sequence of the first archaeal PGI isolated from Pyrococcus furiosus revealed that it is not related to its eukaryotic and many of its bacterial counterparts. In contrast, this archaeal PGI shares similarity with the cupin superfamily that consists of a variety of proteins that are generally involved in sugar metabolism in both prokaryotes and eukaryotes [].; GO: 0004347 glucose-6-phosphate isomerase activity, 0006094 gluconeogenesis, 0006096 glycolysis, 0005737 cytoplasm; PDB: 1J3Q_B 1J3R_B 1J3P_A 2GC0_A 1X8E_A 1X82_A 1QY4_B 2GC2_B 1QXJ_A 1QXR_B ....
Probab=50.27 E-value=40 Score=24.57 Aligned_cols=38 Identities=29% Similarity=0.290 Sum_probs=23.9
Q ss_pred CceeEEEecCCCCc-----eEEE--ECCeEEEecCCCCeEEEEeccc
Q 038292 14 SALAILLEINEVEG-----LQIK--KDGKWIHITPFPNAFVVNVGNV 53 (122)
Q Consensus 14 ~~lTll~qd~~v~G-----LqV~--~~g~W~~v~p~~~~~vvniGd~ 53 (122)
|-=.+|+|+ ..| .-+. ..|+-+.|||.=++.+||+||.
T Consensus 92 G~g~~lLq~--~~~~~~~~~~~v~~~~G~~v~IPp~yaH~tIN~g~~ 136 (182)
T PF06560_consen 92 GEGLILLQK--EEGDDVGDVIAVEAKPGDVVYIPPGYAHRTINTGDE 136 (182)
T ss_dssp SSEEEEEE---TTS-----EEEEEE-TTEEEEE-TT-EEEEEE-SSS
T ss_pred CEEEEEEEe--cCCCcceeEEEEEeCCCCEEEECCCceEEEEECCCC
Confidence 334578884 444 2222 5899999999999999999974
No 36
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=43.97 E-value=24 Score=20.11 Aligned_cols=22 Identities=36% Similarity=0.659 Sum_probs=19.1
Q ss_pred ECCeEEEecCCCCeEEEEeccceee
Q 038292 32 KDGKWIHITPFPNAFVVNVGNVLET 56 (122)
Q Consensus 32 ~~g~W~~v~p~~~~~vvniGd~le~ 56 (122)
.+|+++.++..++ +.+|+..++
T Consensus 13 ~dGeF~~ik~~~~---~~vG~eI~~ 34 (56)
T PF12791_consen 13 PDGEFIKIKRKPG---MEVGQEIEF 34 (56)
T ss_pred CCCcEEEEeCCCC---CcccCEEEE
Confidence 5799999999988 788998887
No 37
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=42.09 E-value=34 Score=24.02 Aligned_cols=47 Identities=21% Similarity=0.437 Sum_probs=25.1
Q ss_pred cccccccCCce---eEEEecCCCC--c-eEEEE---CCeEEEecCCCCeEEEEeccc
Q 038292 6 GLSTHSDDSAL---AILLEINEVE--G-LQIKK---DGKWIHITPFPNAFVVNVGNV 53 (122)
Q Consensus 6 g~~~HtD~~~l---Tll~qd~~v~--G-LqV~~---~g~W~~v~p~~~~~vvniGd~ 53 (122)
++++|.|.-.+ ..+..- ..+ . +.+.. .+..+.+...+|+++|.-|++
T Consensus 109 ~i~~H~D~~~~~~~~~I~sl-SLG~~~~~~f~~~~~~~~~~~~~L~~gsl~vm~g~~ 164 (194)
T PF13532_consen 109 GIGPHSDDEEYGFGPPIASL-SLGSSRVFRFRNKSDDDEPIEVPLPPGSLLVMSGEA 164 (194)
T ss_dssp -EEEE---TTC-CCSEEEEE-EEES-EEEEEEECGGTS-EEEEEE-TTEEEEEETTH
T ss_pred CcCCCCCcccccCCCcEEEE-EEccCceEEEeeccCCCccEEEEcCCCCEEEeChHH
Confidence 88999997633 222221 111 1 22222 368999999999999999986
No 38
>PF02373 JmjC: JmjC domain, hydroxylase; InterPro: IPR013129 Jumonji protein is required for neural tube formation in mice [].There is evidence of domain swapping within the jumonji family of transcription factors []. This domain is often associated with jmjN (see IPR003349 from INTERPRO) and belongs to the Cupin superfamily [].; PDB: 2YU2_A 2YU1_A 3AVR_A 3AVS_A 2OX0_B 2OQ6_B 2WWJ_A 2Q8D_A 3PDQ_A 2YBK_A ....
Probab=41.67 E-value=62 Score=20.39 Aligned_cols=34 Identities=21% Similarity=0.359 Sum_probs=23.1
Q ss_pred CCCCceEEE-ECCeEEEecCCCCeEEEEeccceee
Q 038292 23 NEVEGLQIK-KDGKWIHITPFPNAFVVNVGNVLET 56 (122)
Q Consensus 23 ~~v~GLqV~-~~g~W~~v~p~~~~~vvniGd~le~ 56 (122)
.+++...+. +.|+.+-++|.-=+.++|+|+.+..
T Consensus 76 ~gi~~~~~~Q~~Ge~V~i~pg~~H~v~n~g~~i~~ 110 (114)
T PF02373_consen 76 AGIPVYRFVQKPGEFVFIPPGAYHQVFNLGDNISE 110 (114)
T ss_dssp TTS--EEEEEETT-EEEE-TT-EEEEEESSSEEEE
T ss_pred cCcccccceECCCCEEEECCCceEEEEeCCceEEE
Confidence 356666654 7999999999988999999987653
No 39
>PF06820 Phage_fiber_C: Putative prophage tail fibre C-terminus; InterPro: IPR009640 This entry represents the C terminus of phage 933W tail fibre protein. This domain is found together with conserved RLGP motif. The characteristics of the protein distribution suggest prophage matches.
Probab=34.04 E-value=29 Score=20.79 Aligned_cols=35 Identities=29% Similarity=0.474 Sum_probs=21.6
Q ss_pred cccccccCC---ceeEEEec------CCCCceEEE-ECCeEEEec
Q 038292 6 GLSTHSDDS---ALAILLEI------NEVEGLQIK-KDGKWIHIT 40 (122)
Q Consensus 6 g~~~HtD~~---~lTll~qd------~~v~GLqV~-~~g~W~~v~ 40 (122)
|.-|-+|.. -+|+|-.. .-+.-|||+ .||-|.+|.
T Consensus 17 G~~P~tdg~liT~ltfL~pkd~~~vq~~f~~LQv~fgDGpWqdik 61 (64)
T PF06820_consen 17 GWFPETDGRLITGLTFLDPKDATRVQGVFRHLQVRFGDGPWQDIK 61 (64)
T ss_pred ccccCCCcceEeeeEEecccCchhheeeeeeeEEEeccCChhhcc
Confidence 555667744 45566221 123568998 589999875
No 40
>PF11876 DUF3396: Protein of unknown function (DUF3396); InterPro: IPR021815 This family of proteins are functionally uncharacterised. This protein is found in bacteria and viruses. Proteins in this family are typically between 302 to 382 amino acids in length.
Probab=32.64 E-value=10 Score=28.07 Aligned_cols=43 Identities=23% Similarity=0.426 Sum_probs=32.9
Q ss_pred ccCCceeEEEec--CCCCceEEE---ECCeEEEecCCCCeEEEEeccc
Q 038292 11 SDDSALAILLEI--NEVEGLQIK---KDGKWIHITPFPNAFVVNVGNV 53 (122)
Q Consensus 11 tD~~~lTll~qd--~~v~GLqV~---~~g~W~~v~p~~~~~vvniGd~ 53 (122)
...+.+|+|-+. +..+|.+.. -++.|+.+.+..+.+||-+|+.
T Consensus 105 k~v~WlT~Lg~~~l~~LGG~~~lr~~L~~~~~~i~~~~~g~vI~aG~~ 152 (208)
T PF11876_consen 105 KGVNWLTFLGDPLLEKLGGEDALRSALPGPWIRIHPYGGGVVIQAGEW 152 (208)
T ss_pred CCcchhheeCHHHHHhhccHHHHHhhCCCCceEEEECCCcEEEEeCCC
Confidence 346889999774 357776643 2678999999999999999965
No 41
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=31.09 E-value=1.9e+02 Score=21.55 Aligned_cols=21 Identities=19% Similarity=-0.026 Sum_probs=17.2
Q ss_pred CCeEEEecCCCCeEEEEeccc
Q 038292 33 DGKWIHITPFPNAFVVNVGNV 53 (122)
Q Consensus 33 ~g~W~~v~p~~~~~vvniGd~ 53 (122)
.+.+..+.-.+|.++|.-|+.
T Consensus 163 ~~~~~~l~L~~Gdllvm~G~s 183 (213)
T PRK15401 163 SDPLQRILLEHGDVVVWGGPS 183 (213)
T ss_pred CCceEEEEeCCCCEEEECchH
Confidence 456889999999999988875
No 42
>smart00460 TGc Transglutaminase/protease-like homologues. Transglutaminases are enzymes that establish covalent links between proteins. A subset of transglutaminase homologues appear to catalyse the reverse reaction, the hydrolysis of peptide bonds. Proteins with this domain are both extracellular and intracellular, and it is likely that the eukaryotic intracellular proteins are involved in signalling events.
Probab=31.05 E-value=54 Score=18.63 Aligned_cols=16 Identities=25% Similarity=0.831 Sum_probs=11.9
Q ss_pred eEEEECCeEEEecCCC
Q 038292 28 LQIKKDGKWIHITPFP 43 (122)
Q Consensus 28 LqV~~~g~W~~v~p~~ 43 (122)
+||.-+++|+.+.|.+
T Consensus 53 ~ev~~~~~W~~~D~~~ 68 (68)
T smart00460 53 AEVYLEGGWVPVDPTP 68 (68)
T ss_pred EEEEECCCeEEEeCCC
Confidence 5566678999888754
No 43
>KOG3889 consensus Predicted gamma-butyrobetaine,2-oxoglutarate dioxygenase [Lipid transport and metabolism]
Probab=30.79 E-value=41 Score=26.59 Aligned_cols=21 Identities=24% Similarity=0.589 Sum_probs=16.5
Q ss_pred ccccccccCCceeEEEecCCCCceEEE
Q 038292 5 VGLSTHSDDSALAILLEINEVEGLQIK 31 (122)
Q Consensus 5 ~g~~~HtD~~~lTll~qd~~v~GLqV~ 31 (122)
+-+++|||.. -++ +.+|+||.
T Consensus 187 l~lg~HTD~T----YF~--~~~GiQvf 207 (371)
T KOG3889|consen 187 LELGPHTDGT----YFD--QTPGIQVF 207 (371)
T ss_pred eeecccCCCc----eec--cCCCceEE
Confidence 3579999987 455 47999998
No 44
>PRK04190 glucose-6-phosphate isomerase; Provisional
Probab=28.52 E-value=1.7e+02 Score=21.31 Aligned_cols=22 Identities=23% Similarity=0.383 Sum_probs=19.5
Q ss_pred ECCeEEEecCCCCeEEEEeccc
Q 038292 32 KDGKWIHITPFPNAFVVNVGNV 53 (122)
Q Consensus 32 ~~g~W~~v~p~~~~~vvniGd~ 53 (122)
..|+.+.+||.-.+-++|+|+.
T Consensus 125 ~pGd~v~IPpg~~H~~iN~G~e 146 (191)
T PRK04190 125 EPGTVVYVPPYWAHRSVNTGDE 146 (191)
T ss_pred CCCCEEEECCCCcEEeEECCCC
Confidence 6789999999999999999964
No 45
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=27.61 E-value=27 Score=24.76 Aligned_cols=23 Identities=17% Similarity=0.398 Sum_probs=17.2
Q ss_pred CCCceEEEECCeEEEecCCCCeE
Q 038292 24 EVEGLQIKKDGKWIHITPFPNAF 46 (122)
Q Consensus 24 ~v~GLqV~~~g~W~~v~p~~~~~ 46 (122)
++--|.|+.+|+|....+++...
T Consensus 92 dvLDLRVCYNGEWy~tr~vs~~a 114 (155)
T PF10777_consen 92 DVLDLRVCYNGEWYNTRFVSDQA 114 (155)
T ss_pred CeeEEeEEEcceeeeeccCCHHH
Confidence 34457788999999888777643
No 46
>KOG2778 consensus Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
Probab=25.16 E-value=23 Score=27.89 Aligned_cols=25 Identities=28% Similarity=0.332 Sum_probs=21.5
Q ss_pred ccccccCCceeEEEecCCCCceEEE
Q 038292 7 LSTHSDDSALAILLEINEVEGLQIK 31 (122)
Q Consensus 7 ~~~HtD~~~lTll~qd~~v~GLqV~ 31 (122)
+---+|.|.+|.|.++=++.|.||.
T Consensus 4 ~~iESDPGvFTeli~~fgv~gvQVE 28 (328)
T KOG2778|consen 4 CLIESDPGVFTELIEGFGVKGVQVE 28 (328)
T ss_pred eeeccCCcHHHHHHHhcCCCceeEe
Confidence 3446899999999997789999997
No 47
>KOG1228 consensus Uncharacterized conserved protein [Function unknown]
Probab=24.02 E-value=82 Score=23.87 Aligned_cols=28 Identities=21% Similarity=0.551 Sum_probs=22.6
Q ss_pred CceeEEEecCCCCceEEE-ECCeEEEecCCC
Q 038292 14 SALAILLEINEVEGLQIK-KDGKWIHITPFP 43 (122)
Q Consensus 14 ~~lTll~qd~~v~GLqV~-~~g~W~~v~p~~ 43 (122)
|-+.+|.| +..|..+. ..|.|+.|.+.+
T Consensus 56 GRIsvl~q--g~N~~~~k~qgg~WLyVTHd~ 84 (256)
T KOG1228|consen 56 GRISVLDQ--GINGFEVKGQGGCWLYVTHDL 84 (256)
T ss_pred ceEEEEee--ccCcccccCCCceEEEEeccc
Confidence 77889988 47777777 478999999875
No 48
>PF05520 Citrus_P18: Citrus tristeza virus P18 protein; InterPro: IPR008452 This family contains the P18 proteins of citrus tristeza virus (CTV). CTV is a member of the closterovirus group and is one of the more complex single-stranded RNA viruses. Assembly of the viral genome into virions is a critical process of the virus life cycle often defining the ability of the virus to move within the plant and to be transmitted horizontally to other plants. Closteroviridae virions are polar helical rods assembled primarily by a major coat protein, but with a related minor coat protein at one end. It is the only virus family that encodes a protein with similarity to cellular chaperones, a 70kDa heat-shock protein homologue (HSP70h). Deletion mutagenesis reveals that p33, p6, p18, p13, p20, and p23 genes are not needed for virion formation. Their function is unknown [].
Probab=23.43 E-value=47 Score=22.74 Aligned_cols=12 Identities=42% Similarity=0.955 Sum_probs=9.7
Q ss_pred eEEEEeccceee
Q 038292 45 AFVVNVGNVLET 56 (122)
Q Consensus 45 ~~vvniGd~le~ 56 (122)
+|+||+||++-+
T Consensus 26 sfivnvgdiivr 37 (167)
T PF05520_consen 26 SFIVNVGDIIVR 37 (167)
T ss_pred heeeecccEEEE
Confidence 499999998654
No 49
>COG1741 Pirin-related protein [General function prediction only]
Probab=22.98 E-value=1.3e+02 Score=23.41 Aligned_cols=35 Identities=11% Similarity=0.305 Sum_probs=22.6
Q ss_pred ccccccccCCceeEEEec-----CCCCceEEEECC--eEEEe
Q 038292 5 VGLSTHSDDSALAILLEI-----NEVEGLQIKKDG--KWIHI 39 (122)
Q Consensus 5 ~g~~~HtD~~~lTll~qd-----~~v~GLqV~~~g--~W~~v 39 (122)
++-.+|.+...+|.+++. +..+..++.+.| .|+..
T Consensus 57 f~pHPHrg~etvTyvl~G~i~HrDS~Gn~~~i~pGdvqwMTA 98 (276)
T COG1741 57 FPPHPHRGLETVTYVLDGEIEHRDSLGNKGVIRPGDVQWMTA 98 (276)
T ss_pred CCCCCCCCcEEEEEEEccEEEEeecCCceeeecccceeEEcC
Confidence 456789999999999882 234555555444 45543
No 50
>PF10509 GalKase_gal_bdg: Galactokinase galactose-binding signature; InterPro: IPR019539 This entry represents a highly conserved galactokinase signature sequence which appears to be present in all galactokinases, irrespective of how many other ATP binding sites, etc that they carry []. The function of this domain appears to be to bind galactose [], and it is normally located at the N terminus of these enzymes []. It is associated with IPR013750 from INTERPRO and IPR006204 from INTERPRO. While all enzymes in this entry posses galactokinase activity, some are annotated as N-acetylgalactosamine kinases as they also posses this enzyme activity.; PDB: 1PIE_A 1WUU_A 1S4E_D 2A2C_A 2A2D_A 2AJ4_A 2DEJ_A 2CZ9_A 2DEI_A 3V5R_A ....
Probab=21.58 E-value=47 Score=19.00 Aligned_cols=13 Identities=23% Similarity=0.368 Sum_probs=6.8
Q ss_pred ccccccCCceeEE
Q 038292 7 LSTHSDDSALAIL 19 (122)
Q Consensus 7 ~~~HtD~~~lTll 19 (122)
+|+|||++.-.+|
T Consensus 25 iGeHtDy~gG~Vl 37 (52)
T PF10509_consen 25 IGEHTDYNGGFVL 37 (52)
T ss_dssp E-TT-GGGT-EEE
T ss_pred cCcccccCCCeEE
Confidence 6899998754444
No 51
>PF02678 Pirin: Pirin; InterPro: IPR003829 This entry represents N-terminal domain of Pirin proteins from both eukaryotes and prokaryotes. The function of Pirin is unknown but the gene coding for this protein is known to be expressed in all tissues in the human body although it is expressed most strongly in the liver and heart. Pirin is known to be a nuclear protein, exclusively localised within the nucleoplasma and predominantly concentrated within dot-like subnuclear structures []. Pirin is composed of two structurally similar domains arranged face to face. The N-terminal domain additionally features four beta-strands, and the C-terminal domain also includes four additional -strands and a short alpha-helix. Although the two domains are similar, the C-terminal domain of Pirin differs from the N-terminal domain as it does not contain a metal binding site and its sequence does not contain the conserved metal-coordinating residues []. Pirin is confirmed to be a member of the cupin superfamily on the basis of primary sequence and structural similarity. The presence of a metal binding site in the N-terminal beta-barrel of Pirin, may be significant in its role in regulating NFI DNA replication and NF-kappaB transcription factor activity []. Pirin structure has been found to closely resemble members of the cupin superfamily. Pirin contains the two characteristic sequences of the cupin superfamily, namely PG-(X)5-HXH-(X)4-E-(X)6-G and G-(X)5-PXG-(X)2-H-(X)3-N separated by a variable stretch of 15-50 amino acids. These motifs are best conserved in the N-terminal where the conserved histidine and glutamic acid residues correspond to the metal-coordinating residues. The C-terminal domain motifs lack the metal binding residues normally associated with the cupin fold []. Pirin was identified to be a metal-binding protein [], and was found that the metal-binding residues of Pirins are highly conserved across mammals, plants, fungi, and prokaryotic organisms. Pirin acts as a cofactor for the transcription factor NFI, the regulatory mechanism of which is generally believed to require the assistance of a metal ion []. Structural data supports the hypothesis that the bound iron of Pirin may participate in this transcriptional regulation by enhancing and stabilising the formation of the p50,Bcl3,DNA complex []. Metals have been implicated directly or indirectly in the NF-kappaB family of transcription factors that control expression of a number of early response genes associated with inflammatory responses, cell growth, cell cycle progression, and neoplastic transformation []. However, most metal-dependent transcription factors are DNA-binding proteins that bind to specific sequences when the metal binds to the protein. Pirin, on the other hand, appears to function differently and bind to the transcription factor DNA complex [].; PDB: 2VEC_A 1J1L_A 3ACL_A 2P17_A 1TQ5_A.
Probab=21.14 E-value=1.4e+02 Score=19.70 Aligned_cols=19 Identities=16% Similarity=0.167 Sum_probs=16.1
Q ss_pred ccccccccccCCceeEEEe
Q 038292 3 KVVGLSTHSDDSALAILLE 21 (122)
Q Consensus 3 ~~~g~~~HtD~~~lTll~q 21 (122)
..++.-+|.+...+|++++
T Consensus 40 ~gf~~HPH~g~eivTyv~~ 58 (107)
T PF02678_consen 40 AGFPMHPHRGFEIVTYVLE 58 (107)
T ss_dssp TEEEEEEECSEEEEEEEEE
T ss_pred CCCCCcCCCCceEEEEEec
Confidence 4567789999999999987
No 52
>PF08699 DUF1785: Domain of unknown function (DUF1785); InterPro: IPR014811 This region is found in argonaute [] proteins and often co-occurs with IPR003103 from INTERPRO and IPR003165 from INTERPRO. ; PDB: 1R6Z_P 3MJ0_A 4EI1_A 4F3T_A 4EI3_A 1R4K_A.
Probab=21.12 E-value=1.5e+02 Score=16.83 Aligned_cols=25 Identities=24% Similarity=0.444 Sum_probs=19.1
Q ss_pred CCceEEEECCeEEEecCCCCeEEEEe
Q 038292 25 VEGLQIKKDGKWIHITPFPNAFVVNV 50 (122)
Q Consensus 25 v~GLqV~~~g~W~~v~p~~~~~vvni 50 (122)
.+|||+++ |=...|.|..+.+.+|+
T Consensus 18 ~~Gle~~r-G~~qSvRp~~~~l~lNv 42 (52)
T PF08699_consen 18 GGGLEAWR-GFFQSVRPTQGGLLLNV 42 (52)
T ss_dssp ETTEEEEE-EEEEEEEEETTEEEEEE
T ss_pred CCcEEEeE-eEEeeeEEcCCCCEEEE
Confidence 35788864 35678888888899998
Done!