Query 038292
Match_columns 122
No_of_seqs 113 out of 1054
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 16:18:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038292.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038292hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w9y_A 1-aminocyclopropane-1-c 100.0 4.8E-37 1.6E-41 237.6 7.8 118 1-118 168-307 (319)
2 1gp6_A Leucoanthocyanidin diox 100.0 1.6E-35 5.3E-40 232.0 9.3 109 1-110 223-350 (356)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 1.6E-34 5.6E-39 222.5 8.7 101 3-104 184-308 (312)
4 1odm_A Isopenicillin N synthas 100.0 3E-33 1E-37 217.1 8.6 101 2-105 205-324 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 8.2E-32 2.8E-36 207.5 4.9 102 4-106 177-306 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 4.4E-29 1.5E-33 189.9 6.5 87 3-104 167-276 (280)
7 2rg4_A Uncharacterized protein 90.5 1.3 4.3E-05 31.7 7.5 37 34-70 166-209 (216)
8 2hbt_A EGL nine homolog 1; pro 86.1 2.3 7.8E-05 31.0 6.5 62 7-68 131-213 (247)
9 3dkq_A PKHD-type hydroxylase S 78.1 14 0.00049 26.8 8.2 61 7-67 112-194 (243)
10 2ww6_A Fibritin, T4 fibritin; 51.3 9.3 0.00032 18.4 1.7 16 25-40 8-24 (27)
11 3s57_A Alpha-ketoglutarate-dep 31.8 43 0.0015 23.3 3.4 31 35-65 158-200 (204)
12 3i3q_A Alpha-ketoglutarate-dep 28.5 71 0.0024 22.5 4.1 21 34-54 153-173 (211)
13 2iuw_A Alkylated repair protei 27.5 1E+02 0.0035 21.9 4.9 33 34-66 184-228 (238)
14 4av5_A FIMH; cell adhesion, ba 26.2 1.5E+02 0.0051 20.2 5.2 47 28-74 92-156 (158)
15 1tq5_A Protein YHHW; bicupin, 23.7 72 0.0025 22.9 3.5 18 4-21 53-70 (242)
16 2p17_A Pirin-like protein; GK1 23.4 68 0.0023 23.5 3.3 18 4-21 51-68 (277)
No 1
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=4.8e-37 Score=237.63 Aligned_cols=118 Identities=30% Similarity=0.637 Sum_probs=104.5
Q ss_pred CCccccccccccCCceeEEEecCCCCceEEEECCeEEEecCCCCeEEEEeccceee------------------eceeeE
Q 038292 1 PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET------------------HWRLSI 62 (122)
Q Consensus 1 pe~~~g~~~HtD~~~lTll~qd~~v~GLqV~~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~Si 62 (122)
|+.++|+++|||+|+||||+||++++||||+++|+|++|+|.||+|||||||+||+ ++|||+
T Consensus 168 ~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~~~~R~Si 247 (319)
T 1w9y_A 168 PDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSL 247 (319)
T ss_dssp GGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEE
T ss_pred cccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCCCCCceEE
Confidence 35678999999999999999965799999999999999999999999999999998 689999
Q ss_pred EEEeecCCCeEEecCCCccCCC---CCCCCCCccHHHHHHHHHhcccCCccc-cceeccc
Q 038292 63 GTIYSVRYDGEMYPASNLVSEN---TPPLFKRVTVEEYFGNLCARKLRGKSH-LDALRIE 118 (122)
Q Consensus 63 ~~F~~p~~d~~i~pl~~~v~~~---~p~~y~~~~~~e~~~~~~~~~~~g~~~-ld~~~i~ 118 (122)
+||++|+.|++|+|+++|++++ +|++|++++++||+..++++.+.|+.. ++.+|+.
T Consensus 248 a~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~~ 307 (319)
T 1w9y_A 248 ASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAM 307 (319)
T ss_dssp EEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHHC
T ss_pred EEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHHH
Confidence 9999999999999999999987 599999999999999999888888765 6777765
No 2
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=1.6e-35 Score=231.98 Aligned_cols=109 Identities=28% Similarity=0.447 Sum_probs=102.2
Q ss_pred CCccccccccccCCceeEEEecCCCCceEEEECCeEEEecCCCCeEEEEeccceee------------------eceeeE
Q 038292 1 PEKVVGLSTHSDDSALAILLEINEVEGLQIKKDGKWIHITPFPNAFVVNVGNVLET------------------HWRLSI 62 (122)
Q Consensus 1 pe~~~g~~~HtD~~~lTll~qd~~v~GLqV~~~g~W~~v~p~~~~~vvniGd~le~------------------~~R~Si 62 (122)
|+.++|+++|||+|+||||+|| +++||||+++|+|++|+|.+|+|||||||+||+ ++|||+
T Consensus 223 ~~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Si 301 (356)
T 1gp6_A 223 PELALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISW 301 (356)
T ss_dssp TTTCCSEEEECCCSSEEEEEEC-SCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEE
T ss_pred cccccCcCCccCCCeEEEEEEc-CCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEE
Confidence 4568899999999999999996 799999999999999999999999999999998 689999
Q ss_pred EEEeecCCCe-EEecCCCccCCCCCCCCCCccHHHHHHHHHhcccCCcc
Q 038292 63 GTIYSVRYDG-EMYPASNLVSENTPPLFKRVTVEEYFGNLCARKLRGKS 110 (122)
Q Consensus 63 ~~F~~p~~d~-~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~g~~ 110 (122)
+||++|+.|+ +|+|+++|+++++|++|++++++||+..+++++++|+.
T Consensus 302 a~F~~P~~d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~ 350 (356)
T 1gp6_A 302 AVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEEL 350 (356)
T ss_dssp EEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC
T ss_pred EEeecCCCCCcEEeCChhhcCCCCCccCCCccHHHHHHHHHHhccCcch
Confidence 9999999999 99999999998899999999999999999988766644
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=1.6e-34 Score=222.50 Aligned_cols=101 Identities=28% Similarity=0.483 Sum_probs=93.9
Q ss_pred ccccccccccCCceeEEEecCCCCceEEE-ECCeEEEecCCCCeEEEEeccceee----------------------ece
Q 038292 3 KVVGLSTHSDDSALAILLEINEVEGLQIK-KDGKWIHITPFPNAFVVNVGNVLET----------------------HWR 59 (122)
Q Consensus 3 ~~~g~~~HtD~~~lTll~qd~~v~GLqV~-~~g~W~~v~p~~~~~vvniGd~le~----------------------~~R 59 (122)
..+|+++|||+|+||||+|| +++||||+ ++|+|++|+|.+|++||||||+||+ .+|
T Consensus 184 ~~~g~~~HtD~g~lTlL~qd-~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R 262 (312)
T 3oox_A 184 TGVRAGAHGDINTITLLLGA-EEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPR 262 (312)
T ss_dssp C--CEEEECCCSSEEEEECC-TTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTTSSCCCCEEECCCCGGGTTSCE
T ss_pred CCcCccceecCceEEEEeEc-CcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCCeecCCCceEeCCCccCCCCCE
Confidence 34899999999999999996 89999997 7899999999999999999999998 249
Q ss_pred eeEEEEeecCCCeEEecCCCccCCCCCCCCC-CccHHHHHHHHHhc
Q 038292 60 LSIGTIYSVRYDGEMYPASNLVSENTPPLFK-RVTVEEYFGNLCAR 104 (122)
Q Consensus 60 ~Si~~F~~p~~d~~i~pl~~~v~~~~p~~y~-~~~~~e~~~~~~~~ 104 (122)
||++||++|+.|++|+|+++|+++++|++|+ +++++||+..+++.
T Consensus 263 ~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 263 YSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLRE 308 (312)
T ss_dssp EECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHH
T ss_pred EEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHH
Confidence 9999999999999999999999999999999 99999999999874
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=3e-33 Score=217.08 Aligned_cols=101 Identities=18% Similarity=0.282 Sum_probs=94.6
Q ss_pred Cc-cccccccccCCceeEEEecCCCCceEEE-ECCeEEEecCCCCeEEEEeccceee-----------------eceeeE
Q 038292 2 EK-VVGLSTHSDDSALAILLEINEVEGLQIK-KDGKWIHITPFPNAFVVNVGNVLET-----------------HWRLSI 62 (122)
Q Consensus 2 e~-~~g~~~HtD~~~lTll~qd~~v~GLqV~-~~g~W~~v~p~~~~~vvniGd~le~-----------------~~R~Si 62 (122)
+. .+|+++|||+|+||||+|| +++||||+ ++| |++|+|.+|+|||||||+||+ ++|||+
T Consensus 205 ~~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~R~Si 282 (331)
T 1odm_A 205 DGTKLSFEWHEDVSLITVLYQS-NVQNLQVETAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWVNAERQSL 282 (331)
T ss_dssp TSCEEEEEEECCSSSEEEEEEC-SSCCEEEEETTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECCCSCEEEE
T ss_pred cccccccccccCCCeEEEEeeC-CCCCEEEEcCCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCCCCCEEEE
Confidence 44 7899999999999999996 79999999 788 999999999999999999998 679999
Q ss_pred EEEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhcc
Q 038292 63 GTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCARK 105 (122)
Q Consensus 63 ~~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~~ 105 (122)
+||++|+.|++|+|+++++++++ ++|++++++||++.++++.
T Consensus 283 a~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t~~e~l~~~~~~~ 324 (331)
T 1odm_A 283 PFFVNLGYDSVIDPFDPREPNGK-SDREPLSYGDYLQNGLVSL 324 (331)
T ss_dssp EEEECCCTTCBCCCCCTTSTTCC-CSSCCCBHHHHHHHHHHHH
T ss_pred EEEEcCCCCCEEeCCCccccccc-cCCCCccHHHHHHHHHHHH
Confidence 99999999999999999998877 8999999999999988753
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=99.97 E-value=8.2e-32 Score=207.52 Aligned_cols=102 Identities=16% Similarity=0.147 Sum_probs=93.9
Q ss_pred cccccccccCCceeEEEecCCCCc---eEEEECCeEEEecCCCCeEEEEeccceee-----------------------e
Q 038292 4 VVGLSTHSDDSALAILLEINEVEG---LQIKKDGKWIHITPFPNAFVVNVGNVLET-----------------------H 57 (122)
Q Consensus 4 ~~g~~~HtD~~~lTll~qd~~v~G---LqV~~~g~W~~v~p~~~~~vvniGd~le~-----------------------~ 57 (122)
.+|+++|||+|+||||+||++++| |||+.+|+|++|+|.+|+|||||||+||+ +
T Consensus 177 ~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~ 256 (311)
T 1dcs_A 177 PLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGS 256 (311)
T ss_dssp -CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTC
T ss_pred ccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCC
Confidence 678999999999999999547999 99999999999999999999999999998 2
Q ss_pred ceeeEEEEeecCCCeEEecCCCccCCCCCCCC--CCccHHHHHHHHHhccc
Q 038292 58 WRLSIGTIYSVRYDGEMYPASNLVSENTPPLF--KRVTVEEYFGNLCARKL 106 (122)
Q Consensus 58 ~R~Si~~F~~p~~d~~i~pl~~~v~~~~p~~y--~~~~~~e~~~~~~~~~~ 106 (122)
+|||++||++|+.|++|+ +++++++++|++| ++++++||+..++++..
T Consensus 257 ~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~~ 306 (311)
T 1dcs_A 257 SRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNIR 306 (311)
T ss_dssp CEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCEE
T ss_pred CeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHHh
Confidence 599999999999999999 9999988899999 99999999998776543
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=99.95 E-value=4.4e-29 Score=189.95 Aligned_cols=87 Identities=22% Similarity=0.395 Sum_probs=80.8
Q ss_pred ccccccccccCCceeEEEecCCCCceEEE-ECCeEEEecCCCCeEEEEeccceee----------------------ece
Q 038292 3 KVVGLSTHSDDSALAILLEINEVEGLQIK-KDGKWIHITPFPNAFVVNVGNVLET----------------------HWR 59 (122)
Q Consensus 3 ~~~g~~~HtD~~~lTll~qd~~v~GLqV~-~~g~W~~v~p~~~~~vvniGd~le~----------------------~~R 59 (122)
.++|+++|||+|+||||+|| +++||||+ ++|+|++|+|.||++||||||+||+ .+|
T Consensus 167 ~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R 245 (280)
T 3on7_A 167 GAIRAAAHEDINLITVLPTA-NEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGYFPSTSHRVINPEGTDKTKSR 245 (280)
T ss_dssp CSEEEEEECCCSSEEEEECC-SCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEEECCTTCCTTSCE
T ss_pred CcccccCCCCCCeEEEEEec-CCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhCCcccCCCceEeCCCCCCCCCCe
Confidence 46899999999999999996 89999999 7899999999999999999999998 279
Q ss_pred eeEEEEeecCCCeEEecCCCccCCCCCCCCCCccHHHHHHHHHhc
Q 038292 60 LSIGTIYSVRYDGEMYPASNLVSENTPPLFKRVTVEEYFGNLCAR 104 (122)
Q Consensus 60 ~Si~~F~~p~~d~~i~pl~~~v~~~~p~~y~~~~~~e~~~~~~~~ 104 (122)
||++||++|+.|++|+| ++|++||+..|++.
T Consensus 246 ~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~ 276 (280)
T 3on7_A 246 ISLPLFLHPHPSVVLSE--------------RYTADSYLMERLRE 276 (280)
T ss_dssp EECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHH
T ss_pred EEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHH
Confidence 99999999999999974 58999999999875
No 7
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=90.51 E-value=1.3 Score=31.70 Aligned_cols=37 Identities=11% Similarity=0.068 Sum_probs=29.1
Q ss_pred CeEEEecCCCCeEEEEeccceee-------eceeeEEEEeecCC
Q 038292 34 GKWIHITPFPNAFVVNVGNVLET-------HWRLSIGTIYSVRY 70 (122)
Q Consensus 34 g~W~~v~p~~~~~vvniGd~le~-------~~R~Si~~F~~p~~ 70 (122)
..+..+.|.+|.+|+.-+.+.-. .+|+||+|.+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESWLRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETTSCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCCCEEeccCCCCCCCEEEEEEEeecCC
Confidence 35778999999999998885443 58999999988764
No 8
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=86.07 E-value=2.3 Score=30.99 Aligned_cols=62 Identities=18% Similarity=0.213 Sum_probs=44.3
Q ss_pred ccccccCC-----ceeEEEecCC-------CCceEEEECC--eEEEecCCCCeEEEEeccc--eee-----eceeeEEEE
Q 038292 7 LSTHSDDS-----ALAILLEINE-------VEGLQIKKDG--KWIHITPFPNAFVVNVGNV--LET-----HWRLSIGTI 65 (122)
Q Consensus 7 ~~~HtD~~-----~lTll~qd~~-------v~GLqV~~~g--~W~~v~p~~~~~vvniGd~--le~-----~~R~Si~~F 65 (122)
...|.|.. .+|+++.-|+ .|.|.++.++ ....|.|..|.+|+.-.+. +-. ..|+|++.+
T Consensus 131 y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~~~~H~V~p~~~~R~sit~W 210 (247)
T 2hbt_A 131 YVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVW 210 (247)
T ss_dssp EEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECSTTCCEEECCBSSCEEEEEEE
T ss_pred ccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCCCceeeeccCCCEEEEEEEE
Confidence 46788862 6888877543 3346777544 5789999999999988763 221 889999887
Q ss_pred eec
Q 038292 66 YSV 68 (122)
Q Consensus 66 ~~p 68 (122)
+.-
T Consensus 211 ~~~ 213 (247)
T 2hbt_A 211 YFD 213 (247)
T ss_dssp EEE
T ss_pred EcC
Confidence 653
No 9
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=78.05 E-value=14 Score=26.81 Aligned_cols=61 Identities=18% Similarity=0.103 Sum_probs=42.2
Q ss_pred ccccccCC-----------ceeEEEecCC----C-CceEEEECCeEEEecCCCCeEEEEeccceee------eceeeEEE
Q 038292 7 LSTHSDDS-----------ALAILLEINE----V-EGLQIKKDGKWIHITPFPNAFVVNVGNVLET------HWRLSIGT 64 (122)
Q Consensus 7 ~~~HtD~~-----------~lTll~qd~~----v-~GLqV~~~g~W~~v~p~~~~~vvniGd~le~------~~R~Si~~ 64 (122)
..+|.|.. .+|+++.-++ . |.|.+.....=..|+|..|.+|+.-..++-. ..|++++.
T Consensus 112 y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s~~lH~v~pV~~G~R~~~~~ 191 (243)
T 3dkq_A 112 FGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPSSSLHQVTPVLSGERTAAFM 191 (243)
T ss_dssp EEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEETTSEEEECCEEEECEEEEEE
T ss_pred eccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECCCCeEcCccccccCEEEEEE
Confidence 46788763 4667666543 2 3355555434578999999999988876544 68999888
Q ss_pred Eee
Q 038292 65 IYS 67 (122)
Q Consensus 65 F~~ 67 (122)
+++
T Consensus 192 Wi~ 194 (243)
T 3dkq_A 192 WLQ 194 (243)
T ss_dssp EEE
T ss_pred ehh
Confidence 876
No 10
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=51.34 E-value=9.3 Score=18.41 Aligned_cols=16 Identities=19% Similarity=0.632 Sum_probs=11.1
Q ss_pred CCc-eEEEECCeEEEec
Q 038292 25 VEG-LQIKKDGKWIHIT 40 (122)
Q Consensus 25 v~G-LqV~~~g~W~~v~ 40 (122)
..| .-|+++|.|+...
T Consensus 8 ~Dg~~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 8 RDAQAYVRKFGEWVLLS 24 (27)
T ss_dssp SSSCEEEEETTEEEEGG
T ss_pred cCcceeEEEcCeEEEcc
Confidence 445 3467899999754
No 11
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=31.75 E-value=43 Score=23.32 Aligned_cols=31 Identities=3% Similarity=-0.068 Sum_probs=23.3
Q ss_pred eEEEecCCCCeEEEEeccceee------------eceeeEEEE
Q 038292 35 KWIHITPFPNAFVVNVGNVLET------------HWRLSIGTI 65 (122)
Q Consensus 35 ~W~~v~p~~~~~vvniGd~le~------------~~R~Si~~F 65 (122)
..+.+...+|.++|.-|+.=.. ..|+|+.|-
T Consensus 158 ~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 158 AVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp CCEEEEECTTEEEEEETTHHHHEEEEECCCTTCCSCEEEEEEE
T ss_pred ceEEEECCCCCEEEECchhhheeEeeccccCCCCCCEEEEEee
Confidence 4678888999999988875331 468888774
No 12
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=28.55 E-value=71 Score=22.49 Aligned_cols=21 Identities=14% Similarity=-0.062 Sum_probs=17.2
Q ss_pred CeEEEecCCCCeEEEEeccce
Q 038292 34 GKWIHITPFPNAFVVNVGNVL 54 (122)
Q Consensus 34 g~W~~v~p~~~~~vvniGd~l 54 (122)
+....+.-.+|.++|.-|+.-
T Consensus 153 ~~~~~i~L~~GsllvM~G~~r 173 (211)
T 3i3q_A 153 DPLKRLLLEHGDVVVWGGESR 173 (211)
T ss_dssp SCCEEEEECTTCEEEECGGGT
T ss_pred CceEEEECCCCCEEEECchHH
Confidence 567888889999999888763
No 13
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=27.53 E-value=1e+02 Score=21.87 Aligned_cols=33 Identities=9% Similarity=0.030 Sum_probs=25.1
Q ss_pred CeEEEecCCCCeEEEEeccceee------------eceeeEEEEe
Q 038292 34 GKWIHITPFPNAFVVNVGNVLET------------HWRLSIGTIY 66 (122)
Q Consensus 34 g~W~~v~p~~~~~vvniGd~le~------------~~R~Si~~F~ 66 (122)
+..+.+.-.+|.++|.-|+.=.. ..|+|+.|=.
T Consensus 184 ~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 184 VERVKIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFRT 228 (238)
T ss_dssp CCEEEEEECTTCEEEEEETHHHHEEEEECCCSSCCCCEEEEEEEC
T ss_pred CceEEEEcCCCCEEEEChhhhCccEecCCCcCCCCCCEEEEEeee
Confidence 36888999999999999985211 5788888765
No 14
>4av5_A FIMH; cell adhesion, bacterial adhesin type 1 fimbriae, urinary TR infection, variable immunoglobulin fold; HET: FYZ; 1.40A {Escherichia coli} PDB: 2vco_A* 1uwf_A* 4auy_A* 4av0_A* 4auu_A* 4avh_A* 4avi_A* 4avj_A* 4avk_A* 1tr7_B* 4av4_A*
Probab=26.15 E-value=1.5e+02 Score=20.20 Aligned_cols=47 Identities=4% Similarity=-0.081 Sum_probs=29.5
Q ss_pred eEEEECCeEEEec--------CCCCeEEEEeccceee----------eceeeEEEEeecCCCeEE
Q 038292 28 LQIKKDGKWIHIT--------PFPNAFVVNVGNVLET----------HWRLSIGTIYSVRYDGEM 74 (122)
Q Consensus 28 LqV~~~g~W~~v~--------p~~~~~vvniGd~le~----------~~R~Si~~F~~p~~d~~i 74 (122)
-++..++.|.+.| ...+..+||-||.+.. ..-.++..-+..+.|++|
T Consensus 92 ~~~~~~~~~~P~p~kLyLtp~~~a~Gv~I~~G~~iAtl~~~q~~~~~~~~~~FtWni~A~NDVvv 156 (158)
T 4av5_A 92 RVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDFQFVWNIYANNDVVV 156 (158)
T ss_dssp CEEECCSSCEECCEEEEEEECTTCCEEEECTTCEEEEEEEEEEESSSCCCEEEEEEEEESSCEEE
T ss_pred EEEEecCCccccceEEEEEeccCcCcEEEeCCCEEEEEEEEEEccCCCCCCcEEEEEEecCcEEc
Confidence 3455678888777 3455699999998776 211123444555666665
No 15
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=23.74 E-value=72 Score=22.90 Aligned_cols=18 Identities=33% Similarity=0.418 Sum_probs=14.7
Q ss_pred cccccccccCCceeEEEe
Q 038292 4 VVGLSTHSDDSALAILLE 21 (122)
Q Consensus 4 ~~g~~~HtD~~~lTll~q 21 (122)
.++.-+|.+.-.+|++++
T Consensus 53 gf~~HPHrg~EtvTyvl~ 70 (242)
T 1tq5_A 53 GFGTHPHKDMEILTYVLE 70 (242)
T ss_dssp EEEEEEECSCEEEEEEEE
T ss_pred cCCCcCCCCcEEEEEEEE
Confidence 456678899999999987
No 16
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=23.37 E-value=68 Score=23.51 Aligned_cols=18 Identities=6% Similarity=0.211 Sum_probs=15.3
Q ss_pred cccccccccCCceeEEEe
Q 038292 4 VVGLSTHSDDSALAILLE 21 (122)
Q Consensus 4 ~~g~~~HtD~~~lTll~q 21 (122)
.++..+|.+.-.+|++++
T Consensus 51 gf~~HPHrg~EtVTyvl~ 68 (277)
T 2p17_A 51 TFDVHPHRGIETVTYVIS 68 (277)
T ss_dssp CCCCEEECSEEEEEEEEE
T ss_pred CCCCCCCCCcEEEEEEEE
Confidence 466778999999999998
Done!