BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038294
(799 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 124/318 (38%), Positives = 179/318 (56%), Gaps = 16/318 (5%)
Query: 476 RRRKYENNVQDSSTSET------NLRFFSYNELKEATGGF--KEELGRGSFGIVYKGVLK 527
RR+K +++ D E L+ FS EL+ A+ F K LGRG FG VYKG L
Sbjct: 1 RRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL- 59
Query: 528 SASGKAIAVKKL-DRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMG 586
A G +AVK+L + Q E +F++EV I H+NL++L GFC RLLVY +M
Sbjct: 60 -ADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMA 118
Query: 587 NGTLANLIFAIPKP----DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNY 642
NG++A+ + P+ DW R RI+L ARGL YLH+ C+ IIH D+K NILLD
Sbjct: 119 NGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE 178
Query: 643 FSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIIC 702
F A + DFGL+KL+ +RGT G++APE+ S K DV+ +GVMLLE+I
Sbjct: 179 FEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 238
Query: 703 CRRSVEM-EVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIR 761
+R+ ++ + + +L DW E +L+ LVD D +++ + +A+ C +
Sbjct: 239 GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQ 298
Query: 762 EDPSKRPTMKVVLQMLEG 779
P +RP M V++MLEG
Sbjct: 299 SSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 119/303 (39%), Positives = 171/303 (56%), Gaps = 10/303 (3%)
Query: 485 QDSSTSETNLRFFSYNELKEATGGF--KEELGRGSFGIVYKGVLKSASGKAIAVKKL-DR 541
+D L+ FS EL+ A+ F K LGRG FG VYKG L A G +AVK+L +
Sbjct: 8 EDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRL--ADGXLVAVKRLKEE 65
Query: 542 LAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP- 600
Q E +F++EV I H+NL++L GFC RLLVY +M NG++A+ + P+
Sbjct: 66 RTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 125
Query: 601 ---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLL 657
DW R RI+L ARGL YLH+ C+ IIH D+K NILLD F A + DFGL+KL+
Sbjct: 126 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 185
Query: 658 SDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEM-EVEEEGR 716
+RG G++APE+ S K DV+ +GVMLLE+I +R+ ++ + +
Sbjct: 186 YKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 245
Query: 717 AILTDWAYDCYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQM 776
+L DW E +L+ LVD D +++ + +A+ C + P +RP M V++M
Sbjct: 246 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 305
Query: 777 LEG 779
LEG
Sbjct: 306 LEG 308
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 117/319 (36%), Positives = 177/319 (55%), Gaps = 23/319 (7%)
Query: 479 KYENNVQDSSTSETNLRFFSYN----ELKEATGGFKEE--LGRGSFGIVYKGVLKSASGK 532
K N++ D+ +S + F SY +L+EAT F + +G G FG VYKGVL+ G
Sbjct: 7 KATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD--GA 64
Query: 533 AIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLAN 592
+A+K+ + + EF++E+ + H +LV L+GFCDE +L+Y++M NG L
Sbjct: 65 KVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKR 124
Query: 593 LIFAIPKP----DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKIS 648
++ P W R+ I + ARGL YLH IIH D+K NILLD F KI+
Sbjct: 125 HLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKIT 181
Query: 649 DFGLSKLLLS-DQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSV 707
DFG+SK DQ+ +++GT GY+ PE+F ++ K DVYSFGV+L E++C R ++
Sbjct: 182 DFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI 241
Query: 708 EMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAMADRSR---LQKWLMIAMWCIREDP 764
+ E L +WA + + G+L+ +VD P +AD+ R L+K+ A+ C+
Sbjct: 242 VQSLPRE-MVNLAEWAVESHNNGQLEQIVD---PNLADKIRPESLRKFGDTAVKCLALSS 297
Query: 765 SKRPTMKVVLQMLEGLLEV 783
RP+M VL LE L +
Sbjct: 298 EDRPSMGDVLWKLEYALRL 316
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/314 (36%), Positives = 174/314 (55%), Gaps = 23/314 (7%)
Query: 479 KYENNVQDSSTSETNLRFFSYN----ELKEATGGFKEE--LGRGSFGIVYKGVLKSASGK 532
K N++ D+ +S + F SY +L+EAT F + +G G FG VYKGVL+ G
Sbjct: 7 KATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD--GA 64
Query: 533 AIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLAN 592
+A+K+ + + EF++E+ + H +LV L+GFCDE +L+Y++M NG L
Sbjct: 65 KVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKR 124
Query: 593 LIFAIPKP----DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKIS 648
++ P W R+ I + ARGL YLH IIH D+K NILLD F KI+
Sbjct: 125 HLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKIT 181
Query: 649 DFGLSKLLLS-DQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSV 707
DFG+SK Q+ +++GT GY+ PE+F ++ K DVYSFGV+L E++C R ++
Sbjct: 182 DFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI 241
Query: 708 EMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAMADRSR---LQKWLMIAMWCIREDP 764
+ E L +WA + + G+L+ +VD P +AD+ R L+K+ A+ C+
Sbjct: 242 VQSLPRE-MVNLAEWAVESHNNGQLEQIVD---PNLADKIRPESLRKFGDTAVKCLALSS 297
Query: 765 SKRPTMKVVLQMLE 778
RP+M VL LE
Sbjct: 298 EDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 168/308 (54%), Gaps = 26/308 (8%)
Query: 489 TSETNLRFFSYNELKEATGGFKE--------ELGRGSFGIVYKGVLKSASGKAIAVKKL- 539
S+T FS+ ELK T F E ++G G FG+VYKG + + + +AVKKL
Sbjct: 7 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT---VAVKKLA 63
Query: 540 ---DRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFA 596
D +E +++F E+ + + H+NLV+LLGF + + LVY +M NG+L + +
Sbjct: 64 AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 597 I---PKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLS 653
+ P W++R +I+ A G+ +LHE + IH DIK NILLD F+AKISDFGL+
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180
Query: 654 KLLLS-DQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVE 712
+ Q+ + I GT Y+APE + ++ K D+YSFGV+LLEII +V+
Sbjct: 181 RASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE--H 237
Query: 713 EEGRAILTDWAYDCYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKV 772
E + +L E ++ +D + AD + ++ +A C+ E +KRP +K
Sbjct: 238 REPQLLLDIKEEIEDEEKTIEDYIDK-KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 773 VLQMLEGL 780
V Q+L+ +
Sbjct: 297 VQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 167/308 (54%), Gaps = 26/308 (8%)
Query: 489 TSETNLRFFSYNELKEATGGFKE--------ELGRGSFGIVYKGVLKSASGKAIAVKKL- 539
S+T FS+ ELK T F E ++G G FG+VYKG + + + +AVKKL
Sbjct: 7 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT---VAVKKLA 63
Query: 540 ---DRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFA 596
D +E +++F E+ + + H+NLV+LLGF + + LVY +M NG+L + +
Sbjct: 64 AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 597 I---PKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLS 653
+ P W++R +I+ A G+ +LHE + IH DIK NILLD F+AKISDFGL+
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180
Query: 654 KLLLS-DQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVE 712
+ Q+ I GT Y+APE + ++ K D+YSFGV+LLEII +V+
Sbjct: 181 RASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE--H 237
Query: 713 EEGRAILTDWAYDCYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKV 772
E + +L E ++ +D + AD + ++ +A C+ E +KRP +K
Sbjct: 238 REPQLLLDIKEEIEDEEKTIEDYIDK-KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 773 VLQMLEGL 780
V Q+L+ +
Sbjct: 297 VQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 169/310 (54%), Gaps = 30/310 (9%)
Query: 489 TSETNLRFFSYNELKEATGGFKE--------ELGRGSFGIVYKGVLKSASGKAIAVKKL- 539
S+T FS+ ELK T F E ++G G FG+VYKG + + + +AVKKL
Sbjct: 1 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT---VAVKKLA 57
Query: 540 ---DRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFA 596
D +E +++F E+ + + H+NLV+LLGF + + LVY +M NG+L + +
Sbjct: 58 AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 117
Query: 597 I---PKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLS 653
+ P W++R +I+ A G+ +LHE + IH DIK NILLD F+AKISDFGL+
Sbjct: 118 LDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 174
Query: 654 KLLLSDQSRTHTM---IRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEME 710
+ S++ M I GT Y+APE + ++ K D+YSFGV+LLEII +V+
Sbjct: 175 R--ASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE- 230
Query: 711 VEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTM 770
E + +L E ++ +D + AD + ++ +A C+ E +KRP +
Sbjct: 231 -HREPQLLLDIKEEIEDEEKTIEDYIDK-KMNDADSTSVEAMYSVASQCLHEKKNKRPDI 288
Query: 771 KVVLQMLEGL 780
K V Q+L+ +
Sbjct: 289 KKVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 159/303 (52%), Gaps = 26/303 (8%)
Query: 492 TNLRFFSYNELKEATGGFKE--------ELGRGSFGIVYKGVLKSASGKAIAVKKL---- 539
T FS+ ELK T F E + G G FG+VYKG + + + +AVKKL
Sbjct: 1 TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTT---VAVKKLAAMV 57
Query: 540 DRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAI-- 597
D +E +++F E+ + H+NLV+LLGF + + LVY + NG+L + + +
Sbjct: 58 DITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDG 117
Query: 598 -PKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL 656
P W+ R +I+ A G+ +LHE + IH DIK NILLD F+AKISDFGL++
Sbjct: 118 TPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS 174
Query: 657 LS-DQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEG 715
Q + I GT Y APE + ++ K D+YSFGV+LLEII +V+ E
Sbjct: 175 EKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE--HREP 231
Query: 716 RAILTDWAYDCYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
+ +L E ++ +D + AD + ++ +A C+ E +KRP +K V Q
Sbjct: 232 QLLLDIKEEIEDEEKTIEDYIDK-KXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQ 290
Query: 776 MLE 778
+L+
Sbjct: 291 LLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 140/284 (49%), Gaps = 26/284 (9%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKL--DRLAQEREREFKSEVSAIGRTHHKNLV 566
KE++G GSFG V++ G +AVK L ER EF EV+ + R H N+V
Sbjct: 41 IKEKIGAGSFGTVHRA---EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIF---AIPKPDWNLRVRISLEIARGLVYLHEEC 623
+G + N +V E++ G+L L+ A + D R+ ++ ++A+G+ YLH
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR- 156
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
N PI+H D+K N+L+D ++ K+ DFGLS+L S + GT ++APE ++ P
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA-GTPEWMAPEVLRDEP 215
Query: 684 VSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAM 743
+ K DVYSFGV+L E+ ++ ++ + C RL++ + +
Sbjct: 216 SNEKSDVYSFGVILWELATLQQPWG---NLNPAQVVAAVGFKC---KRLEIPRNLNPQVA 269
Query: 744 ADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVPNPP 787
A I C +P KRP+ ++ +L L++ PP
Sbjct: 270 A----------IIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 142/288 (49%), Gaps = 34/288 (11%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKL--DRLAQEREREFKSEVSAIGRTHHKNLV 566
KE++G GSFG V++ G +AVK L ER EF EV+ + R H N+V
Sbjct: 41 IKEKIGAGSFGTVHRA---EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIF---AIPKPDWNLRVRISLEIARGLVYLHEEC 623
+G + N +V E++ G+L L+ A + D R+ ++ ++A+G+ YLH
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR- 156
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKL----LLSDQSRTHTMIRGTRGYVAPEWF 679
N PI+H ++K N+L+D ++ K+ DFGLS+L LS +S GT ++APE
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA-----GTPEWMAPEVL 211
Query: 680 KNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSD 739
++ P + K DVYSFGV+L E+ ++ ++ + C RL++ + +
Sbjct: 212 RDEPSNEKSDVYSFGVILWELATLQQPWG---NLNPAQVVAAVGFKC---KRLEIPRNLN 265
Query: 740 EPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVPNPP 787
A I C +P KRP+ ++ +L L++ PP
Sbjct: 266 PQVAA----------IIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 153/294 (52%), Gaps = 37/294 (12%)
Query: 493 NLRFFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS 552
+L Y E++ +E +GRG+FG+V K ++ K +A+K+++ ++ + F
Sbjct: 2 SLHMIDYKEIE-----VEEVVGRGAFGVVCKAKWRA---KDVAIKQIE--SESERKAFIV 51
Query: 553 EVSAIGRTHHKNLVQLLGFCDEALNRL-LVYEFMGNGTLANLIF-AIPKPDWNLRVRIS- 609
E+ + R +H N+V+L G C LN + LV E+ G+L N++ A P P + +S
Sbjct: 52 ELRQLSRVNHPNIVKLYGAC---LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 108
Query: 610 -LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSA-KISDFGLSKLLLSDQSRTHTMI 667
L+ ++G+ YLH +IH D+KP N+LL + KI DFG + D T
Sbjct: 109 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNN 164
Query: 668 RGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCY 727
+G+ ++APE F+ + S K DV+S+G++L E+I R+ + E G A WA
Sbjct: 165 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD---EIGGPAFRIMWA---- 217
Query: 728 AEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLL 781
V + P + + + + LM W +DPS+RP+M+ +++++ L+
Sbjct: 218 ------VHNGTRPPLIKNLPKPIESLMTRCW--SKDPSQRPSMEEIVKIMTHLM 263
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 153/294 (52%), Gaps = 37/294 (12%)
Query: 493 NLRFFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS 552
+L Y E++ +E +GRG+FG+V K ++ K +A+K+++ ++ + F
Sbjct: 1 SLHMIDYKEIE-----VEEVVGRGAFGVVCKAKWRA---KDVAIKQIE--SESERKAFIV 50
Query: 553 EVSAIGRTHHKNLVQLLGFCDEALNRL-LVYEFMGNGTLANLIF-AIPKPDWNLRVRIS- 609
E+ + R +H N+V+L G C LN + LV E+ G+L N++ A P P + +S
Sbjct: 51 ELRQLSRVNHPNIVKLYGAC---LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 107
Query: 610 -LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSA-KISDFGLSKLLLSDQSRTHTMI 667
L+ ++G+ YLH +IH D+KP N+LL + KI DFG + D T
Sbjct: 108 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNN 163
Query: 668 RGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCY 727
+G+ ++APE F+ + S K DV+S+G++L E+I R+ + E G A WA
Sbjct: 164 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD---EIGGPAFRIMWA---- 216
Query: 728 AEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLL 781
V + P + + + + LM W +DPS+RP+M+ +++++ L+
Sbjct: 217 ------VHNGTRPPLIKNLPKPIESLMTRCW--SKDPSQRPSMEEIVKIMTHLM 262
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
F +E+G G FG+V+ G + AI K R E +F E + + H LVQL
Sbjct: 14 FVQEIGSGQFGLVHLGYWLNKDKVAI---KTIREGAMSEEDFIEEAEVMMKLSHPKLVQL 70
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLEIARGLVYLHEE 622
G C E LV+EFM +G L++ + FA + + L++ G+ YL E
Sbjct: 71 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA-----ETLLGMCLDVCEGMAYLEEA 125
Query: 623 CNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNA 682
C +IH D+ +N L+ K+SDFG+++ +L DQ + T + + +PE F +
Sbjct: 126 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 182
Query: 683 PVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPA 742
S+K DV+SFGV++ E+ E ++ E R+ ++ D RL +P
Sbjct: 183 RYSSKSDVWSFGVLMWEVFS-----EGKIPYENRSN-SEVVEDISTGFRL------YKPR 230
Query: 743 MADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLE 782
+A Q I C RE P RP +L+ L + E
Sbjct: 231 LASTHVYQ----IMNHCWRERPEDRPAFSRLLRQLAEIAE 266
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 153/320 (47%), Gaps = 42/320 (13%)
Query: 480 YENNVQDSSTSETNLRFFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAV 536
Y S ++ L+F + E+ + ++ +G G FG VYKG+LK++SGK +A+
Sbjct: 21 YFQGAMGSDPNQAVLKFTT--EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAI 78
Query: 537 KKLDRLAQERER-EFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI- 594
K L E++R +F E +G+ H N+++L G + +++ E+M NG L +
Sbjct: 79 KTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLR 138
Query: 595 -----FAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISD 649
F++ + LR IA G+ YL N+ +H D+ +NIL+++ K+SD
Sbjct: 139 EKDGEFSVLQLVGMLR-----GIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSD 190
Query: 650 FGLSKLLLSDQSRTHTMIRGTRG--YVAPEWFKNAPVSAKVDVYSFGVMLLEIICC--RR 705
FGLS++L D T+T G + APE ++ DV+SFG+++ E++ R
Sbjct: 191 FGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
Query: 706 SVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPS 765
E+ E +AI + RL +D + M C +++ +
Sbjct: 251 YWELSNHEVMKAINDGF--------RLPTPMDCPSAI----------YQLMMQCWQQERA 292
Query: 766 KRPTMKVVLQMLEGLLEVPN 785
+RP ++ +L+ L+ P+
Sbjct: 293 RRPKFADIVSILDKLIRAPD 312
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 17/198 (8%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
F +E+G G FG+V+ G + AI K R E +F E + + H LVQL
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKVAI---KTIREGAMSEEDFIEEAEVMMKLSHPKLVQL 67
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLEIARGLVYLHEE 622
G C E LV+EFM +G L++ + FA + + L++ G+ YL E
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA-----ETLLGMCLDVCEGMAYLEEA 122
Query: 623 CNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNA 682
C +IH D+ +N L+ K+SDFG+++ +L DQ + T + + +PE F +
Sbjct: 123 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 179
Query: 683 PVSAKVDVYSFGVMLLEI 700
S+K DV+SFGV++ E+
Sbjct: 180 RYSSKSDVWSFGVLMWEV 197
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 17/198 (8%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
F +E+G G FG+V+ G + AI K R E +F E + + H LVQL
Sbjct: 9 FVQEIGSGQFGLVHLGYWLNKDKVAI---KTIREGAMSEEDFIEEAEVMMKLSHPKLVQL 65
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLEIARGLVYLHEE 622
G C E LV+EFM +G L++ + FA + + L++ G+ YL E
Sbjct: 66 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA-----ETLLGMCLDVCEGMAYLEEA 120
Query: 623 CNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNA 682
C +IH D+ +N L+ K+SDFG+++ +L DQ + T + + +PE F +
Sbjct: 121 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 177
Query: 683 PVSAKVDVYSFGVMLLEI 700
S+K DV+SFGV++ E+
Sbjct: 178 RYSSKSDVWSFGVLMWEV 195
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
F +E+G G FG+V+ G + AI K R E +F E + + H LVQL
Sbjct: 12 FVQEIGSGQFGLVHLGYWLNKDKVAI---KTIREGAMSEEDFIEEAEVMMKLSHPKLVQL 68
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLEIARGLVYLHEE 622
G C E LV EFM +G L++ + FA + + L++ G+ YL E
Sbjct: 69 YGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAA-----ETLLGMCLDVCEGMAYLEEA 123
Query: 623 CNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNA 682
C +IH D+ +N L+ K+SDFG+++ +L DQ + T + + +PE F +
Sbjct: 124 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 180
Query: 683 PVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPA 742
S+K DV+SFGV++ E+ E ++ E R+ ++ D RL +P
Sbjct: 181 RYSSKSDVWSFGVLMWEVFS-----EGKIPYENRSN-SEVVEDISTGFRL------YKPR 228
Query: 743 MADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLE 782
+A Q I C RE P RP +L+ L + E
Sbjct: 229 LASTHVYQ----IMNHCWRERPEDRPAFSRLLRQLAEIAE 264
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 33/280 (11%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
F +E+G G FG+V+ G + AI K ++ E +F E + + H LVQL
Sbjct: 31 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMS---EDDFIEEAEVMMKLSHPKLVQL 87
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLEIARGLVYLHEE 622
G C E LV+EFM +G L++ + FA + + L++ G+ YL E
Sbjct: 88 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA-----ETLLGMCLDVCEGMAYLEEA 142
Query: 623 CNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNA 682
C +IH D+ +N L+ K+SDFG+++ +L DQ + T + + +PE F +
Sbjct: 143 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 199
Query: 683 PVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPA 742
S+K DV+SFGV++ E+ E ++ E R+ ++ D RL +P
Sbjct: 200 RYSSKSDVWSFGVLMWEVFS-----EGKIPYENRSN-SEVVEDISTGFRL------YKPR 247
Query: 743 MADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLE 782
+A Q I C +E P RP +L+ L + E
Sbjct: 248 LASTHVYQ----IMNHCWKERPEDRPAFSRLLRQLAEIAE 283
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 71
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + N V + + +I+ + Y
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH D+ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 132 LEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES 188
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 134/286 (46%), Gaps = 37/286 (12%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLG 570
E LG+G FG K V +G+ + +K+L R +E +R F EV + H N+++ +G
Sbjct: 16 EVLGKGCFGQAIK-VTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 571 --FCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRVRISLEIARGLVYLHEECNVPI 627
+ D+ LN + E++ GTL +I ++ + W+ RV + +IA G+ YLH ++ I
Sbjct: 75 VLYKDKRLN--FITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNI 129
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM-------------IRGTRGYV 674
IH D+ N L+ + ++DFGL++L++ ++++ + + G ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 675 APEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDV 734
APE KVDV+SFG++L EII V + + + G LD
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIG-------RVNADPDYLPRTMDFGLNVRGFLDR 242
Query: 735 LVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGL 780
+ P + I + C DP KRP+ + LE L
Sbjct: 243 YCPPNCPP--------SFFPITVRCCDLDPEKRPSFVKLEHWLETL 280
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 71
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + N V + + +I+ + Y
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH D+ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 132 LEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 188
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 13 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 70
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + N V + + +I+ + Y
Sbjct: 71 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 130
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH D+ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 131 LEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 187
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 188 LAYNKFSIKSDVWAFGVLLWEI 209
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 67
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + N V + + +I+ + Y
Sbjct: 68 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 127
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH D+ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 128 LEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES 184
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 185 LAYNKFSIKSDVWAFGVLLWEI 206
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 115/210 (54%), Gaps = 29/210 (13%)
Query: 512 ELGRGSFGIVYKG----VLKSASGKAIAVKKLDRLAQERER-EFKSEVSAI-GRTHHKNL 565
ELG+GSFG+VY+G ++K + +AVK ++ A RER EF +E S + G T H ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HV 82
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAI----------PKPDWNLRVRISLEIARG 615
V+LLG + L+V E M +G L + + ++ P P ++++ EIA G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG--- 672
+ YL+ + +H D+ +N ++ + F+ KI DFG+++ D T +G +G
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLP 195
Query: 673 --YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
++APE K+ + D++SFGV+L EI
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 71
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + N V + + +I+ + Y
Sbjct: 72 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH D+ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 132 LEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 188
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 115/210 (54%), Gaps = 29/210 (13%)
Query: 512 ELGRGSFGIVYKG----VLKSASGKAIAVKKLDRLAQERER-EFKSEVSAI-GRTHHKNL 565
ELG+GSFG+VY+G ++K + +AVK ++ A RER EF +E S + G T H ++
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HV 79
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAI----------PKPDWNLRVRISLEIARG 615
V+LLG + L+V E M +G L + + ++ P P ++++ EIA G
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG--- 672
+ YL+ + +H D+ +N ++ + F+ KI DFG+++ D T +G +G
Sbjct: 140 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLP 192
Query: 673 --YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
++APE K+ + D++SFGV+L EI
Sbjct: 193 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 115/210 (54%), Gaps = 29/210 (13%)
Query: 512 ELGRGSFGIVYKG----VLKSASGKAIAVKKLDRLAQERER-EFKSEVSAI-GRTHHKNL 565
ELG+GSFG+VY+G ++K + +AVK ++ A RER EF +E S + G T H ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HV 82
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAI----------PKPDWNLRVRISLEIARG 615
V+LLG + L+V E M +G L + + ++ P P ++++ EIA G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG--- 672
+ YL+ + +H D+ +N ++ + F+ KI DFG+++ D T +G +G
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLP 195
Query: 673 --YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
++APE K+ + D++SFGV+L EI
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 66
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + N V + + +I+ + Y
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 126
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH D+ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 127 LEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 66
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + N V + + +I+ + Y
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 126
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH D+ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 127 LEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 68
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + N V + + +I+ + Y
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 128
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH D+ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 129 LEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 185
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 186 LAYNKFSIKSDVWAFGVLLWEI 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 22 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 79
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + N V + + +I+ + Y
Sbjct: 80 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 139
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH D+ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 140 LEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 196
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 197 LAYNKFSIKSDVWAFGVLLWEI 218
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 71
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + N V + + +I+ + Y
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH D+ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 132 LEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 188
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 68
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + N V + + +I+ + Y
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 128
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH D+ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 129 LEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 185
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 186 LAYNKFSIKSDVWAFGVLLWEI 207
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 115/210 (54%), Gaps = 29/210 (13%)
Query: 512 ELGRGSFGIVYKG----VLKSASGKAIAVKKLDRLAQERER-EFKSEVSAI-GRTHHKNL 565
ELG+GSFG+VY+G ++K + +AVK ++ A RER EF +E S + G T H ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HV 82
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAI----------PKPDWNLRVRISLEIARG 615
V+LLG + L+V E M +G L + + ++ P P ++++ EIA G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG--- 672
+ YL+ + +H D+ +N ++ + F+ KI DFG+++ D T +G +G
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLP 195
Query: 673 --YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
++APE K+ + D++SFGV+L EI
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 115/210 (54%), Gaps = 29/210 (13%)
Query: 512 ELGRGSFGIVYKG----VLKSASGKAIAVKKLDRLAQERER-EFKSEVSAI-GRTHHKNL 565
ELG+GSFG+VY+G ++K + +AVK ++ A RER EF +E S + G T H ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HV 82
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAI----------PKPDWNLRVRISLEIARG 615
V+LLG + L+V E M +G L + + ++ P P ++++ EIA G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG--- 672
+ YL+ + +H D+ +N ++ + F+ KI DFG+++ D T +G +G
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETAYYRKGGKGLLP 195
Query: 673 --YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
++APE K+ + D++SFGV+L EI
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G FG VY+GV K S +AVK L E E EF E + +
Sbjct: 7 EMERTDITMKHKLGGGQFGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 64
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + + V + + +I+ + Y
Sbjct: 65 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH D+ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 125 LEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES 181
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEI 203
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 126/289 (43%), Gaps = 31/289 (10%)
Query: 499 YNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIG 558
+ ELK +ELG G FG+V G K A+ + K ++ E EF E +
Sbjct: 2 HMELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS---EDEFFQEAQTMM 58
Query: 559 RTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP-DWNLRVRISLEIARGLV 617
+ H LV+ G C + +V E++ NG L N + + K + + + + ++ G+
Sbjct: 59 KLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMA 118
Query: 618 YLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 677
+L IH D+ +N L+D K+SDFG+++ +L DQ + + + APE
Sbjct: 119 FLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPE 175
Query: 678 WFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVD 737
F S+K DV++FG+++ E+ L YD Y + + V
Sbjct: 176 VFHYFKYSSKSDVWAFGILMWEVFS----------------LGKMPYDLYTNSEVVLKVS 219
Query: 738 SDE----PAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLE 782
P +A + Q I C E P KRPT + +L +E L E
Sbjct: 220 QGHRLYRPHLASDTIYQ----IMYSCWHELPEKRPTFQQLLSSIEPLRE 264
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 115/210 (54%), Gaps = 29/210 (13%)
Query: 512 ELGRGSFGIVYKG----VLKSASGKAIAVKKLDRLAQERER-EFKSEVSAI-GRTHHKNL 565
ELG+GSFG+VY+G ++K + +AVK ++ A RER EF +E S + G T H ++
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HV 81
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAI----------PKPDWNLRVRISLEIARG 615
V+LLG + L+V E M +G L + + ++ P P ++++ EIA G
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG--- 672
+ YL+ + +H D+ +N ++ + F+ KI DFG+++ D T +G +G
Sbjct: 142 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLP 194
Query: 673 --YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
++APE K+ + D++SFGV+L EI
Sbjct: 195 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 64
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + + V + + +I+ + Y
Sbjct: 65 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH D+ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 125 LEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES 181
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEI 203
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 100/198 (50%), Gaps = 17/198 (8%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
F +E+G G FG+V+ G + AI K R E +F E + + H LVQL
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKVAI---KTIREGAMSEEDFIEEAEVMMKLSHPKLVQL 67
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLEIARGLVYLHEE 622
G C E LV+EFM +G L++ + FA + + L++ G+ YL E
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA-----ETLLGMCLDVCEGMAYLEE- 121
Query: 623 CNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNA 682
+IH D+ +N L+ K+SDFG+++ +L DQ + T + + +PE F +
Sbjct: 122 --ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 179
Query: 683 PVSAKVDVYSFGVMLLEI 700
S+K DV+SFGV++ E+
Sbjct: 180 RYSSKSDVWSFGVLMWEV 197
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 213 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 270
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + N V + + +I+ + Y
Sbjct: 271 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 330
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH ++ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 331 LEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 387
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 388 LAYNKFSIKSDVWAFGVLLWEI 409
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 71
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + + V + + +I+ + Y
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 131
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH D+ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 132 LEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 188
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEI 210
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 255 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 312
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + N V + + +I+ + Y
Sbjct: 313 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 372
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH ++ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 373 LEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 429
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 430 LAYNKFSIKSDVWAFGVLLWEI 451
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 66
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + + V + + +I+ + Y
Sbjct: 67 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH D+ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 127 LEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 66
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + + V + + +I+ + Y
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH D+ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 127 LEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 66
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + + V + + +I+ + Y
Sbjct: 67 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH D+ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 127 LEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 66
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + + V + + +I+ + Y
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH D+ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 127 LEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEI 205
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 115/210 (54%), Gaps = 29/210 (13%)
Query: 512 ELGRGSFGIVYKG----VLKSASGKAIAVKKLDRLAQERER-EFKSEVSAI-GRTHHKNL 565
ELG+GSFG+VY+G ++K + +AVK ++ A RER EF +E S + G T H ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HV 82
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAI----------PKPDWNLRVRISLEIARG 615
V+LLG + L+V E M +G L + + ++ P P ++++ EIA G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG--- 672
+ YL+ + +H ++ +N ++ + F+ KI DFG+++ D T +G +G
Sbjct: 143 MAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLP 195
Query: 673 --YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
++APE K+ + D++SFGV+L EI
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 115/210 (54%), Gaps = 29/210 (13%)
Query: 512 ELGRGSFGIVYKG----VLKSASGKAIAVKKLDRLAQERER-EFKSEVSAI-GRTHHKNL 565
ELG+GSFG+VY+G ++K + +AVK ++ A RER EF +E S + G T H ++
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HV 83
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAI----------PKPDWNLRVRISLEIARG 615
V+LLG + L+V E M +G L + + ++ P P ++++ EIA G
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG--- 672
+ YL+ + +H ++ +N ++ + F+ KI DFG+++ D T +G +G
Sbjct: 144 MAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLP 196
Query: 673 --YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
++APE K+ + D++SFGV+L EI
Sbjct: 197 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 64
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + + V + + +I+ + Y
Sbjct: 65 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH D+ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 125 LEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPES 181
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEI 203
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 273
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + + V + + +I+ + Y
Sbjct: 274 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 333
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
L ++ IH ++ +N L+ K++DFGLS+L+ D H + + APE
Sbjct: 334 LEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 390
Query: 679 FKNAPVSAKVDVYSFGVMLLEI 700
S K DV++FGV+L EI
Sbjct: 391 LAYNKFSIKSDVWAFGVLLWEI 412
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 103/212 (48%), Gaps = 9/212 (4%)
Query: 493 NLRFFSYN--ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREF 550
NL F S + E++ K +LG G +G VY GV K S +AVK L E E EF
Sbjct: 18 NLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYS-LTVAVKTLKEDTMEVE-EF 75
Query: 551 KSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL 610
E + + H NLVQLLG C +V E+M G L + + + + V + +
Sbjct: 76 LKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYM 135
Query: 611 --EIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR 668
+I+ + YL ++ IH D+ +N L+ K++DFGLS+L+ D H +
Sbjct: 136 ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAK 192
Query: 669 GTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+ APE S K DV++FGV+L EI
Sbjct: 193 FPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 27/209 (12%)
Query: 512 ELGRGSFGIVY----KGVLKSASGKAIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLV 566
ELG+GSFG+VY KGV+K +A+K ++ A RER EF +E S + + ++V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFA----------IPKPDWNLRVRISLEIARGL 616
+LLG + L++ E M G L + + + + P + ++++ EIA G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 617 VYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG---- 672
YL+ +H D+ +N ++ F+ KI DFG+++ D T +G +G
Sbjct: 146 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPV 198
Query: 673 -YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+++PE K+ + DV+SFGV+L EI
Sbjct: 199 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 103/205 (50%), Gaps = 13/205 (6%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 67
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + N V + + +I+ + Y
Sbjct: 68 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 127
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR---GYVA 675
L ++ IH D+ +N L+ K++DFGLS+L+ D T+T G + + A
Sbjct: 128 LEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAPAGAKFPIKWTA 181
Query: 676 PEWFKNAPVSAKVDVYSFGVMLLEI 700
PE S K DV++FGV+L EI
Sbjct: 182 PESLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 103/205 (50%), Gaps = 13/205 (6%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E++ K +LG G +G VY+GV K S +AVK L E E EF E + +
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKEDTMEVE-EFLKEAAVMKEI 68
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVY 618
H NLVQLLG C ++ EFM G L + + + + N V + + +I+ + Y
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 128
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR---GYVA 675
L ++ IH D+ +N L+ K++DFGLS+L+ D T+T G + + A
Sbjct: 129 LEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAPAGAKFPIKWTA 182
Query: 676 PEWFKNAPVSAKVDVYSFGVMLLEI 700
PE S K DV++FGV+L EI
Sbjct: 183 PESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 27/209 (12%)
Query: 512 ELGRGSFGIVY----KGVLKSASGKAIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLV 566
ELG+GSFG+VY KGV+K +A+K ++ A RER EF +E S + + ++V
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFA----------IPKPDWNLRVRISLEIARGL 616
+LLG + L++ E M G L + + + + P + ++++ EIA G+
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 617 VYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG---- 672
YL+ +H D+ +N ++ F+ KI DFG+++ D T +G +G
Sbjct: 137 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPV 189
Query: 673 -YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+++PE K+ + DV+SFGV+L EI
Sbjct: 190 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 27/209 (12%)
Query: 512 ELGRGSFGIVY----KGVLKSASGKAIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLV 566
ELG+GSFG+VY KGV+K +A+K ++ A RER EF +E S + + ++V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFA----------IPKPDWNLRVRISLEIARGL 616
+LLG + L++ E M G L + + + + P + ++++ EIA G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 617 VYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG---- 672
YL+ +H D+ +N ++ F+ KI DFG+++ D T +G +G
Sbjct: 152 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPV 204
Query: 673 -YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+++PE K+ + DV+SFGV+L EI
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 27/209 (12%)
Query: 512 ELGRGSFGIVY----KGVLKSASGKAIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLV 566
ELG+GSFG+VY KGV+K +A+K ++ A RER EF +E S + + ++V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFA----------IPKPDWNLRVRISLEIARGL 616
+LLG + L++ E M G L + + + + P + ++++ EIA G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 617 VYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG---- 672
YL+ +H D+ +N ++ F+ KI DFG+++ D T +G +G
Sbjct: 145 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPV 197
Query: 673 -YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+++PE K+ + DV+SFGV+L EI
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 27/209 (12%)
Query: 512 ELGRGSFGIVY----KGVLKSASGKAIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLV 566
ELG+GSFG+VY KGV+K +A+K ++ A RER EF +E S + + ++V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFA----------IPKPDWNLRVRISLEIARGL 616
+LLG + L++ E M G L + + + + P + ++++ EIA G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 617 VYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG---- 672
YL+ +H D+ +N ++ F+ KI DFG+++ D T +G +G
Sbjct: 152 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPV 204
Query: 673 -YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+++PE K+ + DV+SFGV+L EI
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 27/209 (12%)
Query: 512 ELGRGSFGIVY----KGVLKSASGKAIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLV 566
ELG+GSFG+VY KGV+K +A+K ++ A RER EF +E S + + ++V
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFA----------IPKPDWNLRVRISLEIARGL 616
+LLG + L++ E M G L + + + + P + ++++ EIA G+
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 617 VYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG---- 672
YL+ +H D+ +N ++ F+ KI DFG+++ D T +G +G
Sbjct: 142 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPV 194
Query: 673 -YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+++PE K+ + DV+SFGV+L EI
Sbjct: 195 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 27/209 (12%)
Query: 512 ELGRGSFGIVY----KGVLKSASGKAIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLV 566
ELG+GSFG+VY KGV+K +A+K ++ A RER EF +E S + + ++V
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFA----------IPKPDWNLRVRISLEIARGL 616
+LLG + L++ E M G L + + + + P + ++++ EIA G+
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 617 VYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG---- 672
YL+ +H D+ +N ++ F+ KI DFG+++ D T +G +G
Sbjct: 143 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPV 195
Query: 673 -YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+++PE K+ + DV+SFGV+L EI
Sbjct: 196 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 27/209 (12%)
Query: 512 ELGRGSFGIVY----KGVLKSASGKAIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLV 566
ELG+GSFG+VY KGV+K +A+K ++ A RER EF +E S + + ++V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFA----------IPKPDWNLRVRISLEIARGL 616
+LLG + L++ E M G L + + + + P + ++++ EIA G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 617 VYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG---- 672
YL+ +H D+ +N ++ F+ KI DFG+++ D T +G +G
Sbjct: 146 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPV 198
Query: 673 -YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+++PE K+ + DV+SFGV+L EI
Sbjct: 199 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 27/209 (12%)
Query: 512 ELGRGSFGIVY----KGVLKSASGKAIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLV 566
ELG+GSFG+VY KGV+K +A+K ++ A RER EF +E S + + ++V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFA----------IPKPDWNLRVRISLEIARGL 616
+LLG + L++ E M G L + + + + P + ++++ EIA G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 617 VYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG---- 672
YL+ +H D+ +N ++ F+ KI DFG+++ D T +G +G
Sbjct: 139 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPV 191
Query: 673 -YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+++PE K+ + DV+SFGV+L EI
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 27/209 (12%)
Query: 512 ELGRGSFGIVY----KGVLKSASGKAIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLV 566
ELG+GSFG+VY KGV+K +A+K ++ A RER EF +E S + + ++V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFA----------IPKPDWNLRVRISLEIARGL 616
+LLG + L++ E M G L + + + + P + ++++ EIA G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 617 VYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG---- 672
YL+ +H D+ +N ++ F+ KI DFG+++ D T +G +G
Sbjct: 145 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPV 197
Query: 673 -YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+++PE K+ + DV+SFGV+L EI
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 27/209 (12%)
Query: 512 ELGRGSFGIVY----KGVLKSASGKAIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLV 566
ELG+GSFG+VY KGV+K +A+K ++ A RER EF +E S + + ++V
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFA----------IPKPDWNLRVRISLEIARGL 616
+LLG + L++ E M G L + + + + P + ++++ EIA G+
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 617 VYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG---- 672
YL+ +H D+ +N ++ F+ KI DFG+++ D T +G +G
Sbjct: 174 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPV 226
Query: 673 -YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+++PE K+ + DV+SFGV+L EI
Sbjct: 227 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 108/208 (51%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYK---GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAI 557
+ +E F ++LG+G+FG V L+ +G+ +AVKKL +E R+F+ E+ +
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
Query: 558 GRTHHKNLVQLLGFCDEALNR--LLVYEFMGNGTLANLIFA-IPKPDWNLRVRISLEIAR 614
H N+V+ G C A R L+ E++ G+L + + A + D ++ + +I +
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICK 128
Query: 615 GLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-- 672
G+ YL + IH D+ +NIL++N KI DFGL+K+L D+ G
Sbjct: 129 GMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 673 YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+ APE + S DV+SFGV+L E+
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 27/209 (12%)
Query: 512 ELGRGSFGIVY----KGVLKSASGKAIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLV 566
ELG+GSFG+VY KGV+K +A+K ++ A RER EF +E S + + ++V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFA----------IPKPDWNLRVRISLEIARGL 616
+LLG + L++ E M G L + + + + P + ++++ EIA G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 617 VYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG---- 672
YL+ +H D+ +N + F+ KI DFG+++ D T +G +G
Sbjct: 139 AYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPV 191
Query: 673 -YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+++PE K+ + DV+SFGV+L EI
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 11/201 (5%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNL 565
F E +GRG FG VY G L GK I AVK L+R+ E +F +E + H N+
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 566 VQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEEC 623
+ LLG C + L+V +M +G L N I P + L++A+G+ +L +
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK- 153
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS---DQSRTHTMIRGTRGYVAPEWFK 680
+H D+ +N +LD F+ K++DFGL++ +L D T + ++A E +
Sbjct: 154 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
+ K DV+SFGV+L E++
Sbjct: 212 TQKFTTKSDVWSFGVLLWELM 232
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 11/201 (5%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNL 565
F E +GRG FG VY G L GK I AVK L+R+ E +F +E + H N+
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 566 VQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEEC 623
+ LLG C + L+V +M +G L N I P + L++A+G+ YL +
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK- 151
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR---GYVAPEWFK 680
+H D+ +N +LD F+ K++DFGL++ + + + G + ++A E +
Sbjct: 152 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
+ K DV+SFGV+L E++
Sbjct: 210 TQKFTTKSDVWSFGVLLWELM 230
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYK---GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAI 557
+ +E F ++LG+G+FG V L+ +G+ +AVKKL +E R+F+ E+ +
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
Query: 558 GRTHHKNLVQLLGFCDEALNR--LLVYEFMGNGTLANLIFAIPKPDWNLR-VRISLEIAR 614
H N+V+ G C A R L+ E++ G+L + + + +++ ++ + +I +
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 128
Query: 615 GLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-- 672
G+ YL + IH D+ +NIL++N KI DFGL+K+L D+ G
Sbjct: 129 GMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 673 YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+ APE + S DV+SFGV+L E+
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 497 FSYNELKEATGGFKEEL-----------GRGSFGIVYKGVLKSASGKAI--AVKKLDRLA 543
F++ + EA F +E+ G G FG V G LK + I A+K L
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 544 QERER-EFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FA 596
E++R +F SE S +G+ H N++ L G ++ +++ EFM NG+L + + F
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 597 IPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL 656
+ + LR IA G+ YL ++ +H D+ +NIL+++ K+SDFGLS+ L
Sbjct: 134 VIQLVGMLR-----GIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL 185
Query: 657 LSDQSR-THTMIRGTR---GYVAPEWFKNAPVSAKVDVYSFGVMLLEIICC--RRSVEME 710
D S T+T G + + APE + ++ DV+S+G+++ E++ R +M
Sbjct: 186 EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT 245
Query: 711 VEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTM 770
++ AI D+ RL P M S L + LM+ W ++D + RP
Sbjct: 246 NQDVINAIEQDY--------RL-------PPPMDCPSALHQ-LMLDCW--QKDRNHRPKF 287
Query: 771 KVVLQMLEGLLEVPN 785
++ L+ ++ PN
Sbjct: 288 GQIVNTLDKMIRNPN 302
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYK---GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAI 557
+ +E F ++LG+G+FG V L+ +G+ +AVKKL +E R+F+ E+ +
Sbjct: 5 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 64
Query: 558 GRTHHKNLVQLLGFCDEALNR--LLVYEFMGNGTLANLIFAIPKPDWNLR-VRISLEIAR 614
H N+V+ G C A R L+ E++ G+L + + + +++ ++ + +I +
Sbjct: 65 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 124
Query: 615 GLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-- 672
G+ YL + IH D+ +NIL++N KI DFGL+K+L D+ G
Sbjct: 125 GMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 181
Query: 673 YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+ APE + S DV+SFGV+L E+
Sbjct: 182 WYAPESLTESKFSVASDVWSFGVVLYEL 209
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYK---GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAI 557
+ +E F ++LG+G+FG V L+ +G+ +AVKKL +E R+F+ E+ +
Sbjct: 11 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 70
Query: 558 GRTHHKNLVQLLGFCDEALNR--LLVYEFMGNGTLANLIFAIPKPDWNLR-VRISLEIAR 614
H N+V+ G C A R L+ E++ G+L + + + +++ ++ + +I +
Sbjct: 71 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 130
Query: 615 GLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-- 672
G+ YL + IH D+ +NIL++N KI DFGL+K+L D+ G
Sbjct: 131 GMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 187
Query: 673 YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+ APE + S DV+SFGV+L E+
Sbjct: 188 WYAPESLTESKFSVASDVWSFGVVLYEL 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYK---GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAI 557
+ +E F ++LG+G+FG V L+ +G+ +AVKKL +E R+F+ E+ +
Sbjct: 4 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 63
Query: 558 GRTHHKNLVQLLGFCDEALNR--LLVYEFMGNGTLANLIFAIPKPDWNLR-VRISLEIAR 614
H N+V+ G C A R L+ E++ G+L + + + +++ ++ + +I +
Sbjct: 64 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 123
Query: 615 GLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-- 672
G+ YL + IH D+ +NIL++N KI DFGL+K+L D+ G
Sbjct: 124 GMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 180
Query: 673 YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+ APE + S DV+SFGV+L E+
Sbjct: 181 WYAPESLTESKFSVASDVWSFGVVLYEL 208
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYK---GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAI 557
+ +E F ++LG+G+FG V L+ +G+ +AVKKL +E R+F+ E+ +
Sbjct: 13 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 72
Query: 558 GRTHHKNLVQLLGFCDEALNR--LLVYEFMGNGTLANLIFAIPKPDWNLR-VRISLEIAR 614
H N+V+ G C A R L+ E++ G+L + + + +++ ++ + +I +
Sbjct: 73 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 132
Query: 615 GLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-- 672
G+ YL + IH D+ +NIL++N KI DFGL+K+L D+ G
Sbjct: 133 GMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 189
Query: 673 YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+ APE + S DV+SFGV+L E+
Sbjct: 190 WYAPESLTESKFSVASDVWSFGVVLYEL 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYK---GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAI 557
+ +E F ++LG+G+FG V L+ +G+ +AVKKL +E R+F+ E+ +
Sbjct: 37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 96
Query: 558 GRTHHKNLVQLLGFCDEALNR--LLVYEFMGNGTLANLIFAIPKPDWNLR-VRISLEIAR 614
H N+V+ G C A R L+ E++ G+L + + + +++ ++ + +I +
Sbjct: 97 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 156
Query: 615 GLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-- 672
G+ YL + IH D+ +NIL++N KI DFGL+K+L D+ G
Sbjct: 157 GMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 213
Query: 673 YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+ APE + S DV+SFGV+L E+
Sbjct: 214 WYAPESLTESKFSVASDVWSFGVVLYEL 241
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYK---GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAI 557
+ +E F ++LG+G+FG V L+ +G+ +AVKKL +E R+F+ E+ +
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 558 GRTHHKNLVQLLGFCDEALNR--LLVYEFMGNGTLANLIFAIPKPDWNLR-VRISLEIAR 614
H N+V+ G C A R L+ E++ G+L + + + +++ ++ + +I +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 615 GLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-- 672
G+ YL + IH D+ +NIL++N KI DFGL+K+L D+ G
Sbjct: 126 GMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 182
Query: 673 YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+ APE + S DV+SFGV+L E+
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 42 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 100
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 101 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIH 157
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S T + GT Y+ PE + KVD
Sbjct: 158 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 214
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 215 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 263
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 264 SRL----------LKHNPSQRPMLREVLE 282
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYK---GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAI 557
+ +E F ++LG+G+FG V L+ +G+ +AVKKL +E R+F+ E+ +
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 558 GRTHHKNLVQLLGFCDEALNR--LLVYEFMGNGTLANLIFAIPKPDWNLR-VRISLEIAR 614
H N+V+ G C A R L+ E++ G+L + + + +++ ++ + +I +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 615 GLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-- 672
G+ YL + IH D+ +NIL++N KI DFGL+K+L D+ G
Sbjct: 126 GMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 182
Query: 673 YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+ APE + S DV+SFGV+L E+
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 11/201 (5%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNL 565
F E +GRG FG VY G L GK I AVK L+R+ E +F +E + H N+
Sbjct: 52 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 566 VQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEEC 623
+ LLG C + L+V +M +G L N I P + L++A+G+ YL +
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK- 170
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR---GYVAPEWFK 680
+H D+ +N +LD F+ K++DFGL++ + + + G + ++A E +
Sbjct: 171 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
+ K DV+SFGV+L E++
Sbjct: 229 TQKFTTKSDVWSFGVLLWELM 249
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYK---GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAI 557
+ +E F ++LG+G+FG V L+ +G+ +AVKKL +E R+F+ E+ +
Sbjct: 12 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 71
Query: 558 GRTHHKNLVQLLGFCDEALNR--LLVYEFMGNGTLANLIFAIPKPDWNLR-VRISLEIAR 614
H N+V+ G C A R L+ E++ G+L + + + +++ ++ + +I +
Sbjct: 72 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 131
Query: 615 GLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-- 672
G+ YL + IH D+ +NIL++N KI DFGL+K+L D+ G
Sbjct: 132 GMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 188
Query: 673 YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+ APE + S DV+SFGV+L E+
Sbjct: 189 WYAPESLTESKFSVASDVWSFGVVLYEL 216
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYK---GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAI 557
+ +E F ++LG+G+FG V L+ +G+ +AVKKL +E R+F+ E+ +
Sbjct: 10 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 69
Query: 558 GRTHHKNLVQLLGFCDEALNR--LLVYEFMGNGTLANLIFAIPKPDWNLR-VRISLEIAR 614
H N+V+ G C A R L+ E++ G+L + + + +++ ++ + +I +
Sbjct: 70 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 129
Query: 615 GLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-- 672
G+ YL + IH D+ +NIL++N KI DFGL+K+L D+ G
Sbjct: 130 GMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 186
Query: 673 YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+ APE + S DV+SFGV+L E+
Sbjct: 187 WYAPESLTESKFSVASDVWSFGVVLYEL 214
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 11/201 (5%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNL 565
F E +GRG FG VY G L GK I AVK L+R+ E +F +E + H N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 566 VQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEEC 623
+ LLG C + L+V +M +G L N I P + L++A+G+ YL +
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK- 152
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR---GYVAPEWFK 680
+H D+ +N +LD F+ K++DFGL++ + + + G + ++A E +
Sbjct: 153 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
+ K DV+SFGV+L E++
Sbjct: 211 TQKFTTKSDVWSFGVLLWELM 231
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 11/201 (5%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNL 565
F E +GRG FG VY G L GK I AVK L+R+ E +F +E + H N+
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 566 VQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEEC 623
+ LLG C + L+V +M +G L N I P + L++A+G+ YL +
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK- 147
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR---GYVAPEWFK 680
+H D+ +N +LD F+ K++DFGL++ + + + G + ++A E +
Sbjct: 148 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
+ K DV+SFGV+L E++
Sbjct: 206 TQKFTTKSDVWSFGVLLWELM 226
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYK---GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAI 557
+ +E F +LG+G+FG V L+ +G+ +AVKKL +E R+F+ E+ +
Sbjct: 9 QFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
Query: 558 GRTHHKNLVQLLGFCDEALNR--LLVYEFMGNGTLANLIFAIPKPDWNLR-VRISLEIAR 614
H N+V+ G C A R L+ EF+ G+L + + +++ ++ + +I +
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICK 128
Query: 615 GLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-- 672
G+ YL + IH D+ +NIL++N KI DFGL+K+L D+ G
Sbjct: 129 GMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 673 YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+ APE + S DV+SFGV+L E+
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 21/206 (10%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGK--AIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNL 565
+E +G G FG V +G LK+ K +A+K L ER+R EF SE S +G+ H N+
Sbjct: 18 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLEIARGLVYL 619
++L G ++ +++ EFM NG L + + F + + LR IA G+ YL
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR-----GIASGMRYL 132
Query: 620 HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSR-THTMIRGTR---GYVA 675
E + +H D+ +NIL+++ K+SDFGLS+ L + S T+T G + + A
Sbjct: 133 AE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTA 189
Query: 676 PEWFKNAPVSAKVDVYSFGVMLLEII 701
PE ++ D +S+G+++ E++
Sbjct: 190 PEAIAFRKFTSASDAWSYGIVMWEVM 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYK---GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAI 557
+ +E F ++LG+G+FG V L+ +G+ +AVKKL +E R+F+ E+ +
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 83
Query: 558 GRTHHKNLVQLLGFCDEALNR--LLVYEFMGNGTLANLIFAIPKPDWNLR-VRISLEIAR 614
H N+V+ G C A R L+ E++ G+L + + + +++ ++ + +I +
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 615 GLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-- 672
G+ YL + IH D+ +NIL++N KI DFGL+K+L D+ G
Sbjct: 144 GMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 673 YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+ APE + S DV+SFGV+L E+
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 33 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 91
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 92 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 148
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S T + GT Y+ PE + KVD
Sbjct: 149 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 205
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 206 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 254
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 255 SRL----------LKHNPSQRPMLREVLE 273
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 11/201 (5%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNL 565
F E +GRG FG VY G L GK I AVK L+R+ E +F +E + H N+
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 566 VQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEEC 623
+ LLG C + L+V +M +G L N I P + L++A+G+ YL +
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK- 151
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR---GYVAPEWFK 680
+H D+ +N +LD F+ K++DFGL++ + + + G + ++A E +
Sbjct: 152 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
+ K DV+SFGV+L E++
Sbjct: 210 TQKFTTKSDVWSFGVLLWELM 230
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 16 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 131
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S T + GT Y+ PE + KVD
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 189 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 237
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 238 SRL----------LKHNPSQRPMLREVLE 256
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 11/201 (5%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNL 565
F E +GRG FG VY G L GK I AVK L+R+ E +F +E + H N+
Sbjct: 26 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 85
Query: 566 VQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEEC 623
+ LLG C + L+V +M +G L N I P + L++A+G+ YL +
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK- 144
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR---GYVAPEWFK 680
+H D+ +N +LD F+ K++DFGL++ + + + G + ++A E +
Sbjct: 145 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 202
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
+ K DV+SFGV+L E++
Sbjct: 203 TQKFTTKSDVWSFGVLLWELM 223
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 11/201 (5%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNL 565
F E +GRG FG VY G L GK I AVK L+R+ E +F +E + H N+
Sbjct: 53 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 566 VQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEEC 623
+ LLG C + L+V +M +G L N I P + L++A+G+ YL +
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK- 171
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR---GYVAPEWFK 680
+H D+ +N +LD F+ K++DFGL++ + + + G + ++A E +
Sbjct: 172 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 229
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
+ K DV+SFGV+L E++
Sbjct: 230 TQKFTTKSDVWSFGVLLWELM 250
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 11/201 (5%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNL 565
F E +GRG FG VY G L GK I AVK L+R+ E +F +E + H N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 566 VQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEEC 623
+ LLG C + L+V +M +G L N I P + L++A+G+ YL +
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK- 152
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR---GYVAPEWFK 680
+H D+ +N +LD F+ K++DFGL++ + + + G + ++A E +
Sbjct: 153 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
+ K DV+SFGV+L E++
Sbjct: 211 TQKFTTKSDVWSFGVLLWELM 231
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYK---GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAI 557
+ +E F ++LG+G+FG V L+ +G+ +AVKKL +E R+F+ E+ +
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 83
Query: 558 GRTHHKNLVQLLGFCDEALNR--LLVYEFMGNGTLANLIFAIPKPDWNLR-VRISLEIAR 614
H N+V+ G C A R L+ E++ G+L + + + +++ ++ + +I +
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 615 GLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-- 672
G+ YL + IH D+ +NIL++N KI DFGL+K+L D+ G
Sbjct: 144 GMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 673 YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+ APE + S DV+SFGV+L E+
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 11/201 (5%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNL 565
F E +GRG FG VY G L GK I AVK L+R+ E +F +E + H N+
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 566 VQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEEC 623
+ LLG C + L+V +M +G L N I P + L++A+G+ YL +
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK- 149
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR---GYVAPEWFK 680
+H D+ +N +LD F+ K++DFGL++ + + + G + ++A E +
Sbjct: 150 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 207
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
+ K DV+SFGV+L E++
Sbjct: 208 TQKFTTKSDVWSFGVLLWELM 228
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ LG G++G V V + +A+AVK +D + A + K E+ +H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 71
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G E + L E+ G L + I +P+PD R ++ G+VYLH +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLH---GIG 125
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I H DIKP+N+LLD + KISDFGL+ + +++ R + GT YVAPE K
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 686 AK-VDVYSFGVMLLEIIC 702
A+ VDV+S G++L ++
Sbjct: 186 AEPVDVWSCGIVLTAMLA 203
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 11/201 (5%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNL 565
F E +GRG FG VY G L GK I AVK L+R+ E +F +E + H N+
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 566 VQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEEC 623
+ LLG C + L+V +M +G L N I P + L++A+G+ YL +
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK- 150
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR---GYVAPEWFK 680
+H D+ +N +LD F+ K++DFGL++ + + + G + ++A E +
Sbjct: 151 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
+ K DV+SFGV+L E++
Sbjct: 209 TQKFTTKSDVWSFGVLLWELM 229
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ LG G++G V V + +A+AVK +D + A + K E+ +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G E + L E+ G L + I +P+PD R ++ G+VYLH +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLH---GIG 124
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I H DIKP+N+LLD + KISDFGL+ + +++ R + GT YVAPE K
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 686 AK-VDVYSFGVMLLEIIC 702
A+ VDV+S G++L ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNL 565
F E +GRG FG VY G L GK I AVK L+R+ E +F +E + H N+
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 566 VQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEEC 623
+ LLG C + L+V +M +G L N I P + L++A+G+ +L +
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK- 153
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS---DQSRTHTMIRGTRGYVAPEWFK 680
+H D+ +N +LD F+ K++DFGL++ + D T + ++A E +
Sbjct: 154 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
+ K DV+SFGV+L E++
Sbjct: 212 TQKFTTKSDVWSFGVLLWELM 232
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 121/269 (44%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 17 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIH 132
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S S T + GT Y+ PE + KVD
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVD 189
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 190 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 238
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 239 SRL----------LKHNPSQRPMLREVLE 257
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ LG G++G V V + +A+AVK +D + A + K E+ +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G E + L E+ G L + I +P+PD R ++ G+VYLH +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLH---GIG 124
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I H DIKP+N+LLD + KISDFGL+ + +++ R + GT YVAPE K
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 686 AK-VDVYSFGVMLLEIIC 702
A+ VDV+S G++L ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 21/214 (9%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKL----DRLAQEREREFKSEVSA 556
E+ A +E +G G FG VY+ G +AVK D + + E
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFW---IGDEVAVKAARHDPDEDISQTIENVRQEAKL 59
Query: 557 IGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGL 616
H N++ L G C + N LV EF G L N + + + ++ V +++IARG+
Sbjct: 60 FAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGM 118
Query: 617 VYLHEECNVPIIHCDIKPQNILLDNYFS--------AKISDFGLSKLLLSDQSRTHTM-I 667
YLH+E VPIIH D+K NIL+ KI+DFGL++ + RT M
Sbjct: 119 NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTKMSA 174
Query: 668 RGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEII 701
G ++APE + + S DV+S+GV+L E++
Sbjct: 175 AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELL 208
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 21 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 136
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S T + GT Y+ PE + KVD
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVD 193
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 194 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 242
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 243 SRL----------LKHNPSQRPXLREVLE 261
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNL 565
F E +GRG FG VY G L GK I AVK L+R+ E +F +E + H N+
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 566 VQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEEC 623
+ LLG C + L+V +M +G L N I P + L++A+G+ +L +
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK- 211
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS---DQSRTHTMIRGTRGYVAPEWFK 680
+H D+ +N +LD F+ K++DFGL++ + D T + ++A E +
Sbjct: 212 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
+ K DV+SFGV+L E++
Sbjct: 270 TQKFTTKSDVWSFGVLLWELM 290
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 21 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 136
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S T + GT Y+ PE + KVD
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 194 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 242
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 243 SRL----------LKHNPSQRPMLREVLE 261
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNL 565
F E +GRG FG VY G L GK I AVK L+R+ E +F +E + H N+
Sbjct: 39 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 98
Query: 566 VQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEEC 623
+ LLG C + L+V +M +G L N I P + L++A+G+ +L +
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK- 157
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS---DQSRTHTMIRGTRGYVAPEWFK 680
+H D+ +N +LD F+ K++DFGL++ + D T + ++A E +
Sbjct: 158 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
+ K DV+SFGV+L E++
Sbjct: 216 TQKFTTKSDVWSFGVLLWELM 236
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNL 565
F E +GRG FG VY G L GK I AVK L+R+ E +F +E + H N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 566 VQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEEC 623
+ LLG C + L+V +M +G L N I P + L++A+G+ +L +
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK- 152
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS---DQSRTHTMIRGTRGYVAPEWFK 680
+H D+ +N +LD F+ K++DFGL++ + D T + ++A E +
Sbjct: 153 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
+ K DV+SFGV+L E++
Sbjct: 211 TQKFTTKSDVWSFGVLLWELM 231
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ LG G++G V V + +A+AVK +D + A + K E+ +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G E + L E+ G L + I +P+PD R ++ G+VYLH +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLH---GIG 124
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I H DIKP+N+LLD + KISDFGL+ + +++ R + GT YVAPE K
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 686 AK-VDVYSFGVMLLEIIC 702
A+ VDV+S G++L ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNL 565
F E +GRG FG VY G L GK I AVK L+R+ E +F +E + H N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 566 VQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEEC 623
+ LLG C + L+V +M +G L N I P + L++A+G+ +L +
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK- 152
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS---DQSRTHTMIRGTRGYVAPEWFK 680
+H D+ +N +LD F+ K++DFGL++ + D T + ++A E +
Sbjct: 153 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
+ K DV+SFGV+L E++
Sbjct: 211 TQKFTTKSDVWSFGVLLWELM 231
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRTHHKNL 565
F E +GRG FG VY G L GK I AVK L+R+ E +F +E + H N+
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 566 VQLLGFCDEALNR-LLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEEC 623
+ LLG C + L+V +M +G L N I P + L++A+G+ +L +
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK- 150
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS---DQSRTHTMIRGTRGYVAPEWFK 680
+H D+ +N +LD F+ K++DFGL++ + D T + ++A E +
Sbjct: 151 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
+ K DV+SFGV+L E++
Sbjct: 209 TQKFTTKSDVWSFGVLLWELM 229
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
++G GS GIV K +GK +AVKK+D Q+R +EV + HH N+V +
Sbjct: 52 KIGEGSTGIVCIATEKH-TGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSS 110
Query: 572 CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCD 631
+V EF+ G L +++ + + + L + R L YLH N +IH D
Sbjct: 111 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-ATVCLSVLRALSYLH---NQGVIHRD 166
Query: 632 IKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVY 691
IK +ILL + K+SDFG + + + ++ GT ++APE P +VD++
Sbjct: 167 IKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV-GTPYWMAPEVISRLPYGTEVDIW 225
Query: 692 SFGVMLLEII 701
S G+M++E+I
Sbjct: 226 SLGIMVIEMI 235
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 19 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 134
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S T + GT Y+ PE + KVD
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 240
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 241 SRL----------LKHNPSQRPMLREVLE 259
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ LG G++G V V + +A+AVK +D + A + K E+ +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G E + L E+ G L + I +P+PD R ++ G+VYLH +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLH---GIG 124
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I H DIKP+N+LLD + KISDFGL+ + +++ R + GT YVAPE K
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 686 AK-VDVYSFGVMLLEIIC 702
A+ VDV+S G++L ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ LG G++G V V + +A+AVK +D + A + K E+ +H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFY 71
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G E + L E+ G L + I +P+PD R ++ G+VYLH +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLH---GIG 125
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I H DIKP+N+LLD + KISDFGL+ + +++ R + GT YVAPE K
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 686 AK-VDVYSFGVMLLEIIC 702
A+ VDV+S G++L ++
Sbjct: 186 AEPVDVWSCGIVLTAMLA 203
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ LG G++G V V + +A+AVK +D + A + K E+ +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G E + L E+ G L + I +P+PD R ++ G+VYLH +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLH---GIG 124
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I H DIKP+N+LLD + KISDFGL+ + +++ R + GT YVAPE K
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 686 AK-VDVYSFGVMLLEIIC 702
A+ VDV+S G++L ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 16 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 131
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S T + GT Y+ PE + KVD
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVD 188
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 189 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 237
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 238 SRL----------LKHNPSQRPMLREVLE 256
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 124/269 (46%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 17 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 132
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + + SR T+ GT Y+ PE + KVD
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLC-GTLDYLPPEMIEGRMHDEKVD 189
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 190 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 238
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 239 SRL----------LKHNPSQRPMLREVLE 257
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ LG G++G V V + +A+AVK +D + A + K E+ +H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G E + L E+ G L + I +P+PD R ++ G+VYLH +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLH---GIG 125
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I H DIKP+N+LLD + KISDFGL+ + +++ R + GT YVAPE K
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 686 AK-VDVYSFGVMLLEIIC 702
A+ VDV+S G++L ++
Sbjct: 186 AEPVDVWSCGIVLTAMLA 203
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 108/206 (52%), Gaps = 21/206 (10%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGK--AIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNL 565
+E +G G FG V +G LK+ K +A+K L ER+R EF SE S +G+ H N+
Sbjct: 20 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLEIARGLVYL 619
++L G ++ +++ EFM NG L + + F + + LR IA G+ YL
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR-----GIASGMRYL 134
Query: 620 HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSR-THTMIRGTR---GYVA 675
E + +H D+ +NIL+++ K+SDFGLS+ L + S T T G + + A
Sbjct: 135 AE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTA 191
Query: 676 PEWFKNAPVSAKVDVYSFGVMLLEII 701
PE ++ D +S+G+++ E++
Sbjct: 192 PEAIAFRKFTSASDAWSYGIVMWEVM 217
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 20 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 79 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIH 135
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S T + GT Y+ PE + KVD
Sbjct: 136 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 193 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 241
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 242 SRL----------LKHNPSQRPMLREVLE 260
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ LG G++G V V + +A+AVK +D + A + K E+ +H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G E + L E+ G L + I +P+PD R ++ G+VYLH +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLH---GIG 125
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I H DIKP+N+LLD + KISDFGL+ + +++ R + GT YVAPE K
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 686 AK-VDVYSFGVMLLEIIC 702
A+ VDV+S G++L ++
Sbjct: 186 AEPVDVWSCGIVLTAMLA 203
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ LG G++G V V + +A+AVK +D + A + K E+ +H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G E + L E+ G L + I +P+PD R ++ G+VYLH +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLH---GIG 125
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I H DIKP+N+LLD + KISDFGL+ + +++ R + GT YVAPE K
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 686 AK-VDVYSFGVMLLEIIC 702
A+ VDV+S G++L ++
Sbjct: 186 AEPVDVWSCGIVLTAMLA 203
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 142/299 (47%), Gaps = 43/299 (14%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGK--AIAVKKLDRLAQERER-EFKSEVSAI 557
EL + +G G FG V G LK S K ++A+K L E++R +F E S +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLE 611
G+ H N+++L G ++ ++V E+M NG+L + + F + + LR
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 612 IARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR 671
IA G+ YL ++ +H D+ +NIL+++ K+SDFGLS++L D +T TR
Sbjct: 156 IASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TR 208
Query: 672 G------YVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYD 725
G + +PE ++ DV+S+G++L E++ E+ + D Y
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY- 267
Query: 726 CYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVP 784
RL P M + L + LM+ W ++D + RP + ++ +L+ L+ P
Sbjct: 268 -----RL-------PPPMDCPAALYQ-LMLDCW--QKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ LG G++G V V + +A+AVK +D + A + K E+ +H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G E + L E+ G L + I +P+PD R ++ G+VYLH +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLH---GIG 125
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I H DIKP+N+LLD + KISDFGL+ + +++ R + GT YVAPE K
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 686 AK-VDVYSFGVMLLEIIC 702
A+ VDV+S G++L ++
Sbjct: 186 AEPVDVWSCGIVLTAMLA 203
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ LG G++G V V + +A+AVK +D + A + K E+ +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G E + L E+ G L + I +P+PD R ++ G+VYLH +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLH---GIG 124
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I H DIKP+N+LLD + KISDFGL+ + +++ R + GT YVAPE K
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 686 AK-VDVYSFGVMLLEIIC 702
A+ VDV+S G++L ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ LG G++G V V + +A+AVK +D + A + K E+ +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G E + L E+ G L + I +P+PD R ++ G+VYLH +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLH---GIG 124
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I H DIKP+N+LLD + KISDFGL+ + +++ R + GT YVAPE K
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 686 AK-VDVYSFGVMLLEIIC 702
A+ VDV+S G++L ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYK---GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAI 557
+ +E F ++LG+G+FG V L+ +G+ +AVKKL +E R+F+ E+ +
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 558 GRTHHKNLVQLLGFCDEALNR--LLVYEFMGNGTLANLIFAIPKPDWNLR-VRISLEIAR 614
H N+V+ G C A R L+ E++ G+L + + + +++ ++ + +I +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 615 GLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-- 672
G+ YL + IH D+ +NIL++N KI DFGL+K+L D+ G
Sbjct: 126 GMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF 182
Query: 673 YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+ APE + S DV+SFGV+L E+
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 15 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 73
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 74 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIH 130
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S T + GT Y+ PE + KVD
Sbjct: 131 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 187
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 188 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 236
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 237 SRL----------LKHNPSQRPMLREVLE 255
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ LG G++G V V + +A+AVK +D + A + K E+ +H+N+V+
Sbjct: 11 QTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 69
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G E + L E+ G L + I +P+PD R ++ G+VYLH +
Sbjct: 70 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLH---GIG 123
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I H DIKP+N+LLD + KISDFGL+ + +++ R + GT YVAPE K
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 686 AK-VDVYSFGVMLLEIIC 702
A+ VDV+S G++L ++
Sbjct: 184 AEPVDVWSCGIVLTAMLA 201
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ LG G++G V V + +A+AVK +D + A + K E+ +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G E + L E+ G L + I +P+PD R ++ G+VYLH +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLH---GIG 124
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I H DIKP+N+LLD + KISDFGL+ + +++ R + GT YVAPE K
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 686 AK-VDVYSFGVMLLEIIC 702
A+ VDV+S G++L ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ LG G++G V V + +A+AVK +D + A + K E+ +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G E + L E+ G L + I +P+PD R ++ G+VYLH +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLH---GIG 124
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I H DIKP+N+LLD + KISDFGL+ + +++ R + GT YVAPE K
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 686 AK-VDVYSFGVMLLEIIC 702
A+ VDV+S G++L ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 16 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIH 131
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S T + GT Y+ PE + KVD
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 189 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 237
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 238 SRL----------LKHNPSQRPMLREVLE 256
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ LG G++G V V + +A+AVK +D + A + K E+ +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G E + L E+ G L + I +P+PD R ++ G+VYLH +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLH---GIG 124
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I H DIKP+N+LLD + KISDFGL+ + +++ R + GT YVAPE K
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 686 AK-VDVYSFGVMLLEIIC 702
A+ VDV+S G++L ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ LG G++G V V + +A+AVK +D + A + K E+ +H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G E + L E+ G L + I +P+PD R ++ G+VYLH +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLH---GIG 125
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I H DIKP+N+LLD + KISDFGL+ + +++ R + GT YVAPE K
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 686 AK-VDVYSFGVMLLEIIC 702
A+ VDV+S G++L ++
Sbjct: 186 AEPVDVWSCGIVLTAMLA 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ LG G++G V V + +A+AVK +D + A + K E+ +H+N+V+
Sbjct: 12 QTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G E + L E+ G L + I +P+PD R ++ G+VYLH +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLH---GIG 124
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I H DIKP+N+LLD + KISDFGL+ + +++ R + GT YVAPE K
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 686 AK-VDVYSFGVMLLEIIC 702
A+ VDV+S G++L ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ LG G++G V V + +A+AVK +D + A + K E+ +H+N+V+
Sbjct: 13 QTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G E + L E+ G L + I +P+PD R ++ G+VYLH +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLH---GIG 125
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I H DIKP+N+LLD + KISDFGL+ + +++ R + GT YVAPE K
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 686 AK-VDVYSFGVMLLEIIC 702
A+ VDV+S G++L ++
Sbjct: 186 AEPVDVWSCGIVLTAMLA 203
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 19 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 134
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S T + GT Y+ PE + KVD
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 240
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 241 SRL----------LKHNPSQRPMLREVLE 259
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 17 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 132
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S T + GT Y+ PE + KVD
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVD 189
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 190 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 238
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 239 SRL----------LKHNPSQRPMLREVLE 257
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 142/299 (47%), Gaps = 43/299 (14%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGK--AIAVKKLDRLAQERER-EFKSEVSAI 557
EL + +G G FG V G LK S K ++A+K L E++R +F E S +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLE 611
G+ H N+++L G ++ ++V E+M NG+L + + F + + LR
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 612 IARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR 671
IA G+ YL ++ +H D+ +NIL+++ K+SDFGLS++L D +T TR
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TR 208
Query: 672 G------YVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYD 725
G + +PE ++ DV+S+G++L E++ E+ + D Y
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY- 267
Query: 726 CYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVP 784
RL P M + L + LM+ W ++D + RP + ++ +L+ L+ P
Sbjct: 268 -----RL-------PPPMDCPAALYQ-LMLDCW--QKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 142/299 (47%), Gaps = 43/299 (14%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGK--AIAVKKLDRLAQERER-EFKSEVSAI 557
EL + +G G FG V G LK S K ++A+K L E++R +F E S +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLE 611
G+ H N+++L G ++ ++V E+M NG+L + + F + + LR
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 612 IARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR 671
IA G+ YL ++ +H D+ +NIL+++ K+SDFGLS++L D +T TR
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TR 208
Query: 672 G------YVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYD 725
G + +PE ++ DV+S+G++L E++ E+ + D Y
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY- 267
Query: 726 CYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVP 784
RL P M + L + LM+ W ++D + RP + ++ +L+ L+ P
Sbjct: 268 -----RL-------PPPMDCPAALYQ-LMLDCW--QKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 16 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 131
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S T + GT Y+ PE + KVD
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 189 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 237
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 238 SRL----------LKHNPSQRPMLREVLE 256
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 21 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ G + + + K D E+A L Y H + +IH
Sbjct: 80 GYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 136
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S T + GT Y+ PE + KVD
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 194 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 242
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 243 SRL----------LKHNPSQRPMLREVLE 261
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 142/299 (47%), Gaps = 43/299 (14%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGK--AIAVKKLDRLAQERER-EFKSEVSAI 557
EL + +G G FG V G LK S K ++A+K L E++R +F E S +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLE 611
G+ H N+++L G ++ ++V E+M NG+L + + F + + LR
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 612 IARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR 671
IA G+ YL ++ +H D+ +NIL+++ K+SDFGLS++L D +T TR
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TR 208
Query: 672 G------YVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYD 725
G + +PE ++ DV+S+G++L E++ E+ + D Y
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY- 267
Query: 726 CYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVP 784
RL P M + L + LM+ W ++D + RP + ++ +L+ L+ P
Sbjct: 268 -----RL-------PPPMDCPAALYQ-LMLDCW--QKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 21 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 136
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S T + GT Y+ PE + KVD
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 194 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 242
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 243 SRL----------LKHNPSQRPMLREVLE 261
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 142/299 (47%), Gaps = 43/299 (14%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGK--AIAVKKLDRLAQERER-EFKSEVSAI 557
EL + +G G FG V G LK S K ++A+K L E++R +F E S +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLE 611
G+ H N+++L G ++ ++V E+M NG+L + + F + + LR
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 612 IARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR 671
IA G+ YL ++ +H D+ +NIL+++ K+SDFGLS++L D +T TR
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TR 208
Query: 672 G------YVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYD 725
G + +PE ++ DV+S+G++L E++ E+ + D Y
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY- 267
Query: 726 CYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVP 784
RL P M + L + LM+ W ++D + RP + ++ +L+ L+ P
Sbjct: 268 -----RL-------PPPMDCPAALYQ-LMLDCW--QKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 142/299 (47%), Gaps = 43/299 (14%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGK--AIAVKKLDRLAQERER-EFKSEVSAI 557
EL + +G G FG V G LK S K ++A+K L E++R +F E S +
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLE 611
G+ H N+++L G ++ ++V E+M NG+L + + F + + LR
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 153
Query: 612 IARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR 671
IA G+ YL ++ +H D+ +NIL+++ K+SDFGLS++L D +T TR
Sbjct: 154 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TR 206
Query: 672 G------YVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYD 725
G + +PE ++ DV+S+G++L E++ E+ + D Y
Sbjct: 207 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY- 265
Query: 726 CYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVP 784
RL P M + L + LM+ W ++D + RP + ++ +L+ L+ P
Sbjct: 266 -----RL-------PPPMDCPAALYQ-LMLDCW--QKDRNNRPKFEQIVSILDKLIRNP 309
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 135/268 (50%), Gaps = 28/268 (10%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
E +G+GSFG V+KG+ + + + +A+K +D A++ + + E++ + + + +
Sbjct: 29 ERIGKGSFGEVFKGI-DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G + ++ E++G G+ +L+ A P ++ + + EI +GL YLH E IH
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK-EILKGLDYLHSEKK---IH 143
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIK N+LL K++DFG++ L Q + +T + GT ++APE + + +K D
Sbjct: 144 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAYDSKAD 202
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPA--MADRS 747
++S G+ +E+ +G +D R+ L+ + P + D +
Sbjct: 203 IWSLGITAIEL------------AKGEPPNSD-----MHPMRVLFLIPKNNPPTLVGDFT 245
Query: 748 RLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
+ K + A C+ +DPS RPT K +L+
Sbjct: 246 KSFKEFIDA--CLNKDPSFRPTAKELLK 271
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 142/299 (47%), Gaps = 43/299 (14%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGK--AIAVKKLDRLAQERER-EFKSEVSAI 557
EL + +G G FG V G LK S K ++A+K L E++R +F E S +
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLE 611
G+ H N+++L G ++ ++V E+M NG+L + + F + + LR
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 126
Query: 612 IARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR 671
IA G+ YL ++ +H D+ +NIL+++ K+SDFGLS++L D +T TR
Sbjct: 127 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TR 179
Query: 672 G------YVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYD 725
G + +PE ++ DV+S+G++L E++ E+ + D Y
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY- 238
Query: 726 CYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVP 784
RL P M + L + LM+ W ++D + RP + ++ +L+ L+ P
Sbjct: 239 -----RL-------PPPMDCPAALYQ-LMLDCW--QKDRNNRPKFEQIVSILDKLIRNP 282
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 6/190 (3%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
++G GS GIV ++S SGK +AVKK+D Q+R +EV + H+N+V++
Sbjct: 158 KIGEGSTGIVCIATVRS-SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 216
Query: 572 CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCD 631
+V EF+ G L +++ + + + L + + L LH + +IH D
Sbjct: 217 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQALSVLHAQG---VIHRD 272
Query: 632 IKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVY 691
IK +ILL + K+SDFG + + R ++ GT ++APE P +VD++
Sbjct: 273 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIW 331
Query: 692 SFGVMLLEII 701
S G+M++E++
Sbjct: 332 SLGIMVIEMV 341
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 16 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 131
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S T + GT Y+ PE + KVD
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 189 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 237
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 238 SRL----------LKHNPSQRPMLREVLE 256
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 142/299 (47%), Gaps = 43/299 (14%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGK--AIAVKKLDRLAQERER-EFKSEVSAI 557
EL + +G G FG V G LK S K ++A+K L E++R +F E S +
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLE 611
G+ H N+++L G ++ ++V E+M NG+L + + F + + LR
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 143
Query: 612 IARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR 671
IA G+ YL ++ +H D+ +NIL+++ K+SDFGLS++L D +T TR
Sbjct: 144 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TR 196
Query: 672 G------YVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYD 725
G + +PE ++ DV+S+G++L E++ E+ + D Y
Sbjct: 197 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY- 255
Query: 726 CYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVP 784
RL P M + L + LM+ W ++D + RP + ++ +L+ L+ P
Sbjct: 256 -----RL-------PPPMDCPAALYQ-LMLDCW--QKDRNNRPKFEQIVSILDKLIRNP 299
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 109/208 (52%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYK---GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAI 557
+ +E F ++LG+G+FG V L+ +G+ +AVKKL +E R+F+ E+ +
Sbjct: 7 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 66
Query: 558 GRTHHKNLVQLLGFCDEALNR--LLVYEFMGNGTLANLIFAIPKPDWNLR-VRISLEIAR 614
H N+V+ G C A R L+ E++ G+L + + + +++ ++ + +I +
Sbjct: 67 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 126
Query: 615 GLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-- 672
G+ YL + IH ++ +NIL++N KI DFGL+K+L D+ G
Sbjct: 127 GMEYLGTK---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF 183
Query: 673 YVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+ APE + S DV+SFGV+L E+
Sbjct: 184 WYAPESLTESKFSVASDVWSFGVVLYEL 211
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 18 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 76
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 77 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 133
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI++FG S + S T + GT Y+ PE + KVD
Sbjct: 134 RDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 190
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 191 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 239
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 240 SRL----------LKHNPSQRPMLREVLE 258
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 123/269 (45%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 42 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 100
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 101 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIH 157
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + + SR + GT Y+ PE + KVD
Sbjct: 158 RDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLC-GTLDYLPPEMIEGRMHDEKVD 214
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 215 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 263
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 264 SRL----------LKHNPSQRPMLREVLE 282
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 120/269 (44%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 21 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ G + + + K D E+A L Y H + +IH
Sbjct: 80 GYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR---VIH 136
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S + GT Y+ PE + KVD
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVD 193
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 194 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 242
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 243 SRL----------LKHNPSQRPMLREVLE 261
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 6/190 (3%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
++G GS GIV ++S SGK +AVKK+D Q+R +EV + H+N+V++
Sbjct: 81 KIGEGSTGIVCIATVRS-SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 139
Query: 572 CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCD 631
+V EF+ G L +++ + + + L + + L LH + +IH D
Sbjct: 140 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQALSVLHAQG---VIHRD 195
Query: 632 IKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVY 691
IK +ILL + K+SDFG + + R ++ GT ++APE P +VD++
Sbjct: 196 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIW 254
Query: 692 SFGVMLLEII 701
S G+M++E++
Sbjct: 255 SLGIMVIEMV 264
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 19 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 134
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S + GT Y+ PE + KVD
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVD 191
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 240
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 241 SRL----------LKHNPSQRPMLREVLE 259
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 18 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 76
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 77 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 133
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S + GT Y+ PE + KVD
Sbjct: 134 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVD 190
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 191 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 239
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 240 SRL----------LKHNPSQRPMLREVLE 258
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 142/299 (47%), Gaps = 43/299 (14%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGK--AIAVKKLDRLAQERER-EFKSEVSAI 557
EL + +G G FG V G LK S K ++A+K L E++R +F E S +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLE 611
G+ H N+++L G ++ ++V E+M NG+L + + F + + LR
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 612 IARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR 671
IA G+ YL ++ +H D+ +NIL+++ K+SDFGL+++L D +T TR
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT----TR 208
Query: 672 G------YVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYD 725
G + +PE ++ DV+S+G++L E++ E+ + D Y
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY- 267
Query: 726 CYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVP 784
RL P M + L + LM+ W ++D + RP + ++ +L+ L+ P
Sbjct: 268 -----RL-------PPPMDCPAALYQ-LMLDCW--QKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 6/190 (3%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
++G GS GIV ++S SGK +AVKK+D Q+R +EV + H+N+V++
Sbjct: 38 KIGEGSTGIVCIATVRS-SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 96
Query: 572 CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCD 631
+V EF+ G L +++ + + + L + + L LH + +IH D
Sbjct: 97 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQALSVLHAQG---VIHRD 152
Query: 632 IKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVY 691
IK +ILL + K+SDFG + + R ++ GT ++APE P +VD++
Sbjct: 153 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIW 211
Query: 692 SFGVMLLEII 701
S G+M++E++
Sbjct: 212 SLGIMVIEMV 221
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 19 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIH 134
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI++FG S + S T + GT Y+ PE + KVD
Sbjct: 135 RDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 240
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 241 SRL----------LKHNPSQRPMLREVLE 259
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 6/190 (3%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
++G GS GIV ++S SGK +AVKK+D Q+R +EV + H+N+V++
Sbjct: 27 KIGEGSTGIVCIATVRS-SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 85
Query: 572 CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCD 631
+V EF+ G L +++ + + + L + + L LH + +IH D
Sbjct: 86 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQALSVLHAQG---VIHRD 141
Query: 632 IKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVY 691
IK +ILL + K+SDFG + + R ++ GT ++APE P +VD++
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIW 200
Query: 692 SFGVMLLEII 701
S G+M++E++
Sbjct: 201 SLGIMVIEMV 210
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 6/190 (3%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
++G GS GIV ++S SGK +AVKK+D Q+R +EV + H+N+V++
Sbjct: 36 KIGEGSTGIVCIATVRS-SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 94
Query: 572 CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCD 631
+V EF+ G L +++ + + + L + + L LH + +IH D
Sbjct: 95 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQALSVLHAQG---VIHRD 150
Query: 632 IKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVY 691
IK +ILL + K+SDFG + + R ++ GT ++APE P +VD++
Sbjct: 151 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIW 209
Query: 692 SFGVMLLEII 701
S G+M++E++
Sbjct: 210 SLGIMVIEMV 219
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K +A+K L + E+ E + + EV H N+++L
Sbjct: 13 LGKGKFGNVYLAREKQRKF-ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 71
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 72 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 128
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S T + GT Y+ PE + KVD
Sbjct: 129 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 185
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 186 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 234
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 235 SRL----------LKHNPSQRPMLREVLE 253
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 16/200 (8%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
F E LG G+F V+ V + +GK A+K + + R+ ++E++ + + H+N+V L
Sbjct: 13 FMEVLGSGAFSEVFL-VKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTL 71
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIF---AIPKPDWNLRVRISLEIARGLVYLHEECNV 625
+ + LV + + G L + I + D +L ++ ++ + YLHE
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ---QVLSAVKYLHEN--- 125
Query: 626 PIIHCDIKPQNILL---DNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNA 682
I+H D+KP+N+L + I+DFGLSK+ +Q+ + GT GYVAPE
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQK 182
Query: 683 PVSAKVDVYSFGVMLLEIIC 702
P S VD +S GV+ ++C
Sbjct: 183 PYSKAVDCWSIGVITYILLC 202
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 6/190 (3%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
++G GS GIV ++S SGK +AVKK+D Q+R +EV + H+N+V++
Sbjct: 31 KIGEGSTGIVCIATVRS-SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 89
Query: 572 CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCD 631
+V EF+ G L +++ + + + L + + L LH + +IH D
Sbjct: 90 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQALSVLHAQG---VIHRD 145
Query: 632 IKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVY 691
IK +ILL + K+SDFG + + R ++ GT ++APE P +VD++
Sbjct: 146 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIW 204
Query: 692 SFGVMLLEII 701
S G+M++E++
Sbjct: 205 SLGIMVIEMV 214
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 129/266 (48%), Gaps = 24/266 (9%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
E++G+GSFG V+KG+ + + K +A+K +D A++ + + E++ + + + +
Sbjct: 33 EKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G + ++ E++G G+ +L+ P + + I EI +GL YLH E IH
Sbjct: 92 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI-ATILREILKGLDYLHSEKK---IH 147
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIK N+LL + K++DFG++ L Q + +T + GT ++APE K + +K D
Sbjct: 148 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSKAD 206
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAMADRSRL 749
++S G+ +E+ R E +L L+ + P + +
Sbjct: 207 IWSLGITAIEL---ARGEPPHSELHPMKVL--------------FLIPKNNPPTLEGNYS 249
Query: 750 QKWLMIAMWCIREDPSKRPTMKVVLQ 775
+ C+ ++PS RPT K +L+
Sbjct: 250 KPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 141/299 (47%), Gaps = 43/299 (14%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGK--AIAVKKLDRLAQERER-EFKSEVSAI 557
EL + +G G FG V G LK S K ++A+K L E++R +F E S +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLE 611
G+ H N+++L G ++ ++V E+M NG+L + + F + + LR
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 612 IARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR 671
IA G+ YL ++ +H D+ +NIL+++ K+SDFGL ++L D +T TR
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT----TR 208
Query: 672 G------YVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYD 725
G + +PE ++ DV+S+G++L E++ E+ + D Y
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY- 267
Query: 726 CYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVP 784
RL P M + L + LM+ W ++D + RP + ++ +L+ L+ P
Sbjct: 268 -----RL-------PPPMDCPAALYQ-LMLDCW--QKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 129/266 (48%), Gaps = 24/266 (9%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
E++G+GSFG V+KG+ + + K +A+K +D A++ + + E++ + + + +
Sbjct: 13 EKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G + ++ E++G G+ +L+ P + + I EI +GL YLH E IH
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI-ATILREILKGLDYLHSEKK---IH 127
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIK N+LL + K++DFG++ L Q + +T + GT ++APE K + +K D
Sbjct: 128 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSKAD 186
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAMADRSRL 749
++S G+ +E+ R E +L L+ + P + +
Sbjct: 187 IWSLGITAIEL---ARGEPPHSELHPMKVL--------------FLIPKNNPPTLEGNYS 229
Query: 750 QKWLMIAMWCIREDPSKRPTMKVVLQ 775
+ C+ ++PS RPT K +L+
Sbjct: 230 KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 16 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIH 131
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S + GT Y+ PE + KVD
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVD 188
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 189 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 237
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 238 SRL----------LKHNPSQRPMLREVLE 256
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ LG G+ G V V + +A+AVK +D + A + K E+ +H+N+V+
Sbjct: 12 QTLGEGAAGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G E + L E+ G L + I +P+PD R ++ G+VYLH +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLH---GIG 124
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I H DIKP+N+LLD + KISDFGL+ + +++ R + GT YVAPE K
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 686 AK-VDVYSFGVMLLEIIC 702
A+ VDV+S G++L ++
Sbjct: 185 AEPVDVWSCGIVLTAMLA 202
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 16 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIH 131
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S + GT Y+ PE + KVD
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 189 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 237
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 238 SRL----------LKHNPSQRPMLREVLE 256
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 52/320 (16%)
Query: 493 NLRFFS---YNELKEATGGFKEELGRGSFGIVY----KGVLKSASGKAIAVKKLDRLAQE 545
N ++FS + +K K ELG G+FG V+ +L +AVK L ++
Sbjct: 26 NPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASES 85
Query: 546 REREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNL- 604
++F+ E + H+++V+ G C E L+V+E+M +G L N PD L
Sbjct: 86 ARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLL 144
Query: 605 ---------------RVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISD 649
+ ++ ++A G+VYL + +H D+ +N L+ KI D
Sbjct: 145 AGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGD 201
Query: 650 FGLSKLLLSDQ-----SRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCR 704
FG+S+ + S RT IR ++ PE + + DV+SFGV+L EI
Sbjct: 202 FGMSRDIYSTDYYRVGGRTMLPIR----WMPPESILYRKFTTESDVWSFGVVLWEIFTYG 257
Query: 705 RSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDP 764
+ ++ A DC +GR + + P R+ + I C + +P
Sbjct: 258 KQPWYQLS-------NTEAIDCITQGR-----ELERP----RACPPEVYAIMRGCWQREP 301
Query: 765 SKRPTMKVVLQMLEGLLEVP 784
+R ++K V L+ L + P
Sbjct: 302 QQRHSIKDVHARLQALAQAP 321
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 141/299 (47%), Gaps = 43/299 (14%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGK--AIAVKKLDRLAQERER-EFKSEVSAI 557
EL + +G G FG V G LK S K ++A+K L E++R +F E S +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLE 611
G+ H N+++L G ++ ++V E M NG+L + + F + + LR
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 612 IARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR 671
IA G+ YL ++ +H D+ +NIL+++ K+SDFGLS++L D +T TR
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TR 208
Query: 672 G------YVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYD 725
G + +PE ++ DV+S+G++L E++ E+ + D Y
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY- 267
Query: 726 CYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVP 784
RL P M + L + LM+ W ++D + RP + ++ +L+ L+ P
Sbjct: 268 -----RL-------PPPMDCPAALYQ-LMLDCW--QKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 141/299 (47%), Gaps = 43/299 (14%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGK--AIAVKKLDRLAQERER-EFKSEVSAI 557
EL + +G G FG V G LK S K ++A+K L E++R +F E S +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLE 611
G+ H N+++L G ++ ++V E M NG+L + + F + + LR
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 155
Query: 612 IARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR 671
IA G+ YL ++ +H D+ +NIL+++ K+SDFGLS++L D +T TR
Sbjct: 156 IASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TR 208
Query: 672 G------YVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYD 725
G + +PE ++ DV+S+G++L E++ E+ + D Y
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY- 267
Query: 726 CYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVP 784
RL P M + L + LM+ W ++D + RP + ++ +L+ L+ P
Sbjct: 268 -----RL-------PPPMDCPAALYQ-LMLDCW--QKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 141/299 (47%), Gaps = 43/299 (14%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGK--AIAVKKLDRLAQERER-EFKSEVSAI 557
EL + +G G FG V G LK S K ++A+K L E++R +F E S +
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLE 611
G+ H N+++L G ++ ++V E M NG+L + + F + + LR
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR-----G 126
Query: 612 IARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR 671
IA G+ YL ++ +H D+ +NIL+++ K+SDFGLS++L D +T TR
Sbjct: 127 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TR 179
Query: 672 G------YVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYD 725
G + +PE ++ DV+S+G++L E++ E+ + D Y
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY- 238
Query: 726 CYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVP 784
RL P M + L + LM+ W ++D + RP + ++ +L+ L+ P
Sbjct: 239 -----RL-------PPPMDCPAALYQ-LMLDCW--QKDRNNRPKFEQIVSILDKLIRNP 282
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 142/292 (48%), Gaps = 41/292 (14%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERER-EFKSEVSAIGRTHHKNL 565
++ +G G FG V G LK + I A+K L E++R +F SE S +G+ H N+
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLEIARGLVYL 619
+ L G ++ +++ EFM NG+L + + F + + LR IA G+ YL
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR-----GIAAGMKYL 125
Query: 620 HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSR-THTMIRGTR---GYVA 675
++ +H + +NIL+++ K+SDFGLS+ L D S T+T G + + A
Sbjct: 126 ---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 182
Query: 676 PEWFKNAPVSAKVDVYSFGVMLLEIICC--RRSVEMEVEEEGRAILTDWAYDCYAEGRLD 733
PE + ++ DV+S+G+++ E++ R +M ++ AI D+ RL
Sbjct: 183 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDY--------RL- 233
Query: 734 VLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVPN 785
P M S L + LM+ W ++D + RP ++ L+ ++ PN
Sbjct: 234 ------PPPMDCPSALHQ-LMLDCW--QKDRNHRPKFGQIVNTLDKMIRNPN 276
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 19 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 134
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S + GT Y+ PE + KVD
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 240
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 241 SRL----------LKHNPSQRPMLREVLE 259
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 115/234 (49%), Gaps = 30/234 (12%)
Query: 487 SSTSETNLRFFSYNELKEATGGFK--EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ 544
S + +L + L++ G F+ E +G G++G VYKG +G+ A+K +D
Sbjct: 4 SDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKG-RHVKTGQLAAIKVMDVTGD 62
Query: 545 EREREFKSEVSAIGR-THHKNLVQLLGF--------CDEALNRLLVYEFMGNGTLANLIF 595
E E E K E++ + + +HH+N+ G D+ L LV EF G G++ +LI
Sbjct: 63 EEE-EIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL--WLVMEFCGAGSVTDLIK 119
Query: 596 AIP----KPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFG 651
K +W I EI RGL +LH+ +IH DIK QN+LL K+ DFG
Sbjct: 120 NTKGNTLKEEWI--AYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFG 174
Query: 652 LSKLLLSDQSRTHTMIRGTRGYVAPEWFK-----NAPVSAKVDVYSFGVMLLEI 700
+S L R +T I GT ++APE +A K D++S G+ +E+
Sbjct: 175 VSAQLDRTVGRRNTFI-GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 227
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 123/269 (45%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+ E + + EV H N+++L
Sbjct: 19 LGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIH 134
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + + SR + GT Y+ PE + KVD
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLC-GTLDYLPPEMIEGRMHDEKVD 191
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E +E ++ + D EG D++
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI----------- 240
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 241 SRL----------LKHNPSQRPMLREVLE 259
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 109/211 (51%), Gaps = 27/211 (12%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKL-------DRLAQEREREFKSEVSAIGRTH 561
+++++G+G FG+V+KG L +A+K L + E+ +EF+ EV + +
Sbjct: 23 YEKQIGKGGFGLVHKGRL-VKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 562 HKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP-DWNLRVRISLEIARGLVYLH 620
H N+V+L G +V EF+ G L + + P W++++R+ L+IA G+ Y+
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 621 EECNVPIIHCDIKPQNILLDNY-----FSAKISDFGLSKLLLSDQSRTHTM--IRGTRGY 673
+ N PI+H D++ NI L + AK++DFGLS Q H++ + G +
Sbjct: 140 NQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS------QQSVHSVSGLLGNFQW 192
Query: 674 VAPEWF--KNAPVSAKVDVYSFGVMLLEIIC 702
+APE + + K D YSF ++L I+
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILT 223
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 130/301 (43%), Gaps = 49/301 (16%)
Query: 509 FKEELGRGSFGIVY----KGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKN 564
K ELG G+FG V+ +L +AVK L ++ ++F+ E + H++
Sbjct: 16 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNL----------------RVRI 608
+V+ G C E L+V+E+M +G L N PD L + +
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 609 SLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQ-----SRT 663
+ ++A G+VYL + +H D+ +N L+ KI DFG+S+ + S RT
Sbjct: 135 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
Query: 664 HTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWA 723
IR ++ PE + + DV+SFGV+L EI + ++ A
Sbjct: 192 MLPIR----WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS-------NTEA 240
Query: 724 YDCYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEV 783
DC +GR + + P R+ + I C + +P +R ++K V L+ L +
Sbjct: 241 IDCITQGR-----ELERP----RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 291
Query: 784 P 784
P
Sbjct: 292 P 292
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 16/201 (7%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLA-QEREREFKSEVSAIGRTHHKNLVQ 567
FKE LG G+F V K A+GK AVK + + A + +E ++E++ + + H+N+V
Sbjct: 26 FKETLGTGAFSEVVLAEEK-ATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVA 84
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFA---IPKPDWNLRVRISLEIARGLVYLHEECN 624
L + + LV + + G L + I + D + +R ++ + YLH
Sbjct: 85 LEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIR---QVLDAVYYLH---R 138
Query: 625 VPIIHCDIKPQNILL---DNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
+ I+H D+KP+N+L D ISDFGLSK+ + + GT GYVAPE
Sbjct: 139 MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVLAQ 196
Query: 682 APVSAKVDVYSFGVMLLEIIC 702
P S VD +S GV+ ++C
Sbjct: 197 KPYSKAVDCWSIGVIAYILLC 217
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 128/266 (48%), Gaps = 24/266 (9%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
E++G+GSFG V+KG+ + + K +A+K +D A++ + + E++ + + + +
Sbjct: 28 EKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G + ++ E++G G+ +L+ P + + I EI +GL YLH E IH
Sbjct: 87 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI-ATILREILKGLDYLHSEKK---IH 142
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIK N+LL + K++DFG++ L Q + + + GT ++APE K + +K D
Sbjct: 143 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSKAD 201
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAMADRSRL 749
++S G+ +E+ R E +L L+ + P + +
Sbjct: 202 IWSLGITAIEL---ARGEPPHSELHPMKVL--------------FLIPKNNPPTLEGNYS 244
Query: 750 QKWLMIAMWCIREDPSKRPTMKVVLQ 775
+ C+ ++PS RPT K +L+
Sbjct: 245 KPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 15/192 (7%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLG 570
EELG G+FG+V++ V K A+G+ K ++ + K+E+S + + HH L+ L
Sbjct: 57 EELGSGAFGVVHRCVEK-ATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHD 115
Query: 571 FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR----VRISLEIARGLVYLHEECNVP 626
++ +L+ EF+ G L + I A D+ + + + GL ++HE
Sbjct: 116 AFEDKYEMVLILEFLSGGELFDRIAA---EDYKMSEAEVINYMRQACEGLKHMHEHS--- 169
Query: 627 IIHCDIKPQNILLDN--YFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
I+H DIKP+NI+ + S KI DFGL+ L D+ T T + APE PV
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT--ATAEFAAPEIVDREPV 227
Query: 685 SAKVDVYSFGVM 696
D+++ GV+
Sbjct: 228 GFYTDMWAIGVL 239
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 130/301 (43%), Gaps = 49/301 (16%)
Query: 509 FKEELGRGSFGIVY----KGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKN 564
K ELG G+FG V+ +L +AVK L ++ ++F+ E + H++
Sbjct: 22 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNL----------------RVRI 608
+V+ G C E L+V+E+M +G L N PD L + +
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 609 SLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQ-----SRT 663
+ ++A G+VYL + +H D+ +N L+ KI DFG+S+ + S RT
Sbjct: 141 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
Query: 664 HTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWA 723
IR ++ PE + + DV+SFGV+L EI + ++ A
Sbjct: 198 MLPIR----WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE-------A 246
Query: 724 YDCYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEV 783
DC +GR + + P R+ + I C + +P +R ++K V L+ L +
Sbjct: 247 IDCITQGR-----ELERP----RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 297
Query: 784 P 784
P
Sbjct: 298 P 298
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K+ S +A+K L + E+ E + + EV H N+++L
Sbjct: 16 LGKGKFGNVYLAREKN-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ ++ L+ E+ GT+ + + K D E+A L Y H + +IH
Sbjct: 75 GYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---KVIH 131
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S + GT Y+ PE + KVD
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVD 188
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY---DCYAEGRLDVLVDSDEPAMADR 746
++S GV+ E + + E ++ ++ + D EG D++
Sbjct: 189 LWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLI----------- 237
Query: 747 SRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
SRL ++ +PS+RP ++ VL+
Sbjct: 238 SRL----------LKHNPSQRPMLREVLE 256
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ--EREREFKSEVSAIGRTHHKNLVQL 568
+ +G GSFG VYKG +AVK L+ A ++ + FK+EV + +T H N++
Sbjct: 18 QRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 73
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+G+ + ++ G+ +L + K + + I+ + ARG+ YLH + II
Sbjct: 74 MGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---II 130
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM--IRGTRGYVAPEWFK---NAP 683
H D+K NI L + KI DFGL+ + S S +H + G+ ++APE + + P
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 684 VSAKVDVYSFGVMLLEIIC 702
S + DVY+FG++L E++
Sbjct: 190 YSFQSDVYAFGIVLYELMT 208
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 13/196 (6%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
F +ELG G FG+V G + AI + K ++ E EF E + H+ LVQL
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQL 69
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRVRISLEIARGLVYLHEECNVPI 627
G C + ++ E+M NG L N + + + + + ++ + YL +
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QF 126
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYV---APEWFKNAPV 684
+H D+ +N L+++ K+SDFGLS+ +L D+ +T RG++ V PE +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSRGSKFPVRWSPPEVLMYSKF 183
Query: 685 SAKVDVYSFGVMLLEI 700
S+K D+++FGV++ EI
Sbjct: 184 SSKSDIWAFGVLMWEI 199
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 7/193 (3%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
F +ELG G FG+V G + AI + K ++ E EF E + H+ LVQL
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQL 84
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRVRISLEIARGLVYLHEECNVPI 627
G C + ++ E+M NG L N + + + + + ++ + YL +
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QF 141
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAK 687
+H D+ +N L+++ K+SDFGLS+ +L D+ + + + PE + S+K
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 688 VDVYSFGVMLLEI 700
D+++FGV++ EI
Sbjct: 202 SDIWAFGVLMWEI 214
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 128/266 (48%), Gaps = 24/266 (9%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
E++G+GSFG V+KG+ + + K +A+K +D A++ + + E++ + + + +
Sbjct: 13 EKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G + ++ E++G G+ +L+ P + + I EI +GL YLH E IH
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI-ATILREILKGLDYLHSEKK---IH 127
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIK N+LL + K++DFG++ L Q + + + GT ++APE K + +K D
Sbjct: 128 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSKAD 186
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAMADRSRL 749
++S G+ +E+ R E +L L+ + P + +
Sbjct: 187 IWSLGITAIEL---ARGEPPHSELHPMKVL--------------FLIPKNNPPTLEGNYS 229
Query: 750 QKWLMIAMWCIREDPSKRPTMKVVLQ 775
+ C+ ++PS RPT K +L+
Sbjct: 230 KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 137/294 (46%), Gaps = 45/294 (15%)
Query: 509 FKEELGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRT-HH 562
F + LG G+FG V + G+ K + +AVK L A E+E SE+ + H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 563 KNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------------FAIPKPDWNLR--VRI 608
+N+V LLG C L++ E+ G L N + FAI + R +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 609 SLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR 668
S ++A+G+ +L + IH D+ +N+LL N AKI DFGL++ +++D ++ +++
Sbjct: 170 SSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND---SNYIVK 223
Query: 669 GTR----GYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY 724
G ++APE + + + DV+S+G++L EI + + ++ Y
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF------SLGLNPYPGILVNSKFY 277
Query: 725 DCYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLE 778
+G +PA A ++ +M A W + +P+ RPT + + L+
Sbjct: 278 KLVKDG-----YQMAQPAFAPKNIYS--IMQACWAL--EPTHRPTFQQICSFLQ 322
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 140/299 (46%), Gaps = 39/299 (13%)
Query: 500 NELKEATGGFKEELGRGSFGIVYKGVLKSASGK--AIAVKKLDRLAQERER-EFKSEVSA 556
EL + + +G G FG V G LK + A+A+K L E++R +F E S
Sbjct: 38 KELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASI 97
Query: 557 IGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISL 610
+G+ H N+V L G ++V EFM NG L + F + + LR
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR----- 152
Query: 611 EIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGT 670
IA G+ YL ++ +H D+ +NIL+++ K+SDFGLS+++ D +T G
Sbjct: 153 GIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGK 209
Query: 671 --RGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICC--RRSVEMEVEEEGRAILTDWAYDC 726
+ APE + ++ DV+S+G+++ E++ R +M ++ +AI +
Sbjct: 210 IPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY---- 265
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVPN 785
RL PA D LM+ W +++ ++RP + ++ +L+ ++ PN
Sbjct: 266 ----RL--------PAPMDCPAGLHQLMLDCW--QKERAERPKFEQIVGILDKMIRNPN 310
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 137/294 (46%), Gaps = 45/294 (15%)
Query: 509 FKEELGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRT-HH 562
F + LG G+FG V + G+ K + +AVK L A E+E SE+ + H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 563 KNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------------FAIPKPDWNLR--VRI 608
+N+V LLG C L++ E+ G L N + FAI + R +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 609 SLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR 668
S ++A+G+ +L + IH D+ +N+LL N AKI DFGL++ +++D ++ +++
Sbjct: 170 SSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND---SNYIVK 223
Query: 669 GTR----GYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY 724
G ++APE + + + DV+S+G++L EI + + ++ Y
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF------SLGLNPYPGILVNSKFY 277
Query: 725 DCYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLE 778
+G +PA A ++ +M A W + +P+ RPT + + L+
Sbjct: 278 KLVKDG-----YQMAQPAFAPKNIYS--IMQACWAL--EPTHRPTFQQICSFLQ 322
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E+ T E LG G FG V+ G + +AVK L + + + F +E + + +
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSPD-AFLAEANLMKQL 73
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP---KPDWNLRVRISLEIARGLV 617
H+ LV+L + ++ E+M NG+L + + P K N + ++ +IA G+
Sbjct: 74 QHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA 131
Query: 618 YLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 677
++ E IH D++ NIL+ + S KI+DFGL++L+ ++ + + APE
Sbjct: 132 FIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 188
Query: 678 WFKNAPVSAKVDVYSFGVMLLEIICCRR 705
+ K DV+SFG++L EI+ R
Sbjct: 189 AINYGTFTIKSDVWSFGILLTEIVTHGR 216
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 107/202 (52%), Gaps = 21/202 (10%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ--EREREFKSEVSAIGRTHHKNLVQL 568
+ +G GSFG VYKG +AVK L+ A ++ + FK+EV + +T H N++
Sbjct: 30 QRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+G+ + ++ G+ +L + K + + I+ + ARG+ YLH + II
Sbjct: 86 MGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSR---THTM--IRGTRGYVAPEWFK--- 680
H D+K NI L + KI DFGL+ +++SR +H + G+ ++APE +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 681 NAPVSAKVDVYSFGVMLLEIIC 702
+ P S + DVY+FG++L E++
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMT 220
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 137/295 (46%), Gaps = 53/295 (17%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKL-------DRLAQEREREFKSEVSAIGRTH 561
+++++G+G FG+V+KG L +A+K L + E+ +EF+ EV + +
Sbjct: 23 YEKQIGKGGFGLVHKGRL-VKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 562 HKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP-DWNLRVRISLEIARGLVYLH 620
H N+V+L G +V EF+ G L + + P W++++R+ L+IA G+ Y+
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 621 EECNVPIIHCDIKPQNILLDNY-----FSAKISDFGLSKLLLSDQSRTHTM--IRGTRGY 673
+ N PI+H D++ NI L + AK++DFG S Q H++ + G +
Sbjct: 140 NQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS------QQSVHSVSGLLGNFQW 192
Query: 674 VAPEWF--KNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGR 731
+APE + + K D YSF ++L I+ + +D Y+ G+
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILT-----------------GEGPFDEYSYGK 235
Query: 732 LDVL----VDSDEPAMADR--SRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGL 780
+ + + P + + RL+ + + C DP KRP +++ L L
Sbjct: 236 IKFINMIREEGLRPTIPEDCPPRLRNVIEL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 127/266 (47%), Gaps = 24/266 (9%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ +G+GSFG VYKG+ + + + +A+K +D A++ + + E++ + + + +
Sbjct: 25 DRIGKGSFGEVYKGI-DNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYF 83
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G ++ ++ E++G G+ +L+ P + + I EI +GL YLH E IH
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYI-ATILREILKGLDYLHSERK---IH 139
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIK N+LL K++DFG++ L Q + + + GT ++APE K + K D
Sbjct: 140 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDFKAD 198
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAMADRSRL 749
++S G+ +E+ +G +D R+ L+ + P +
Sbjct: 199 IWSLGITAIEL------------AKGEPPNSD-----LHPMRVLFLIPKNSPPTLEGQHS 241
Query: 750 QKWLMIAMWCIREDPSKRPTMKVVLQ 775
+ + C+ +DP RPT K +L+
Sbjct: 242 KPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 7/193 (3%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
F +ELG G FG+V G + AI + K ++ E EF E + H+ LVQL
Sbjct: 12 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQL 68
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRVRISLEIARGLVYLHEECNVPI 627
G C + ++ E+M NG L N + + + + + ++ + YL +
Sbjct: 69 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QF 125
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAK 687
+H D+ +N L+++ K+SDFGLS+ +L D+ + + + PE + S+K
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 185
Query: 688 VDVYSFGVMLLEI 700
D+++FGV++ EI
Sbjct: 186 SDIWAFGVLMWEI 198
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E+ T E LG G FG V+ G + +AVK L + + + F +E + + +
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSPD-AFLAEANLMKQL 71
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP---KPDWNLRVRISLEIARGLV 617
H+ LV+L + ++ E+M NG+L + + P K N + ++ +IA G+
Sbjct: 72 QHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA 129
Query: 618 YLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 677
++ E IH D++ NIL+ + S KI+DFGL++L+ ++ + + APE
Sbjct: 130 FIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 186
Query: 678 WFKNAPVSAKVDVYSFGVMLLEIICCRR 705
+ K DV+SFG++L EI+ R
Sbjct: 187 AINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 7/193 (3%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
F +ELG G FG+V G + AI + K ++ E EF E + H+ LVQL
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQL 84
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRVRISLEIARGLVYLHEECNVPI 627
G C + ++ E+M NG L N + + + + + ++ + YL +
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QF 141
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAK 687
+H D+ +N L+++ K+SDFGLS+ +L D+ + + + PE + S+K
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 688 VDVYSFGVMLLEI 700
D+++FGV++ EI
Sbjct: 202 SDIWAFGVLMWEI 214
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E+ T E LG G FG V+ G + +AVK L + + + F +E + + +
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSPD-AFLAEANLMKQL 74
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP---KPDWNLRVRISLEIARGLV 617
H+ LV+L + ++ E+M NG+L + + P K N + ++ +IA G+
Sbjct: 75 QHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA 132
Query: 618 YLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 677
++ E IH D++ NIL+ + S KI+DFGL++L+ ++ + + APE
Sbjct: 133 FIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 189
Query: 678 WFKNAPVSAKVDVYSFGVMLLEIICCRR 705
+ K DV+SFG++L EI+ R
Sbjct: 190 AINYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 7/193 (3%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
F +ELG G FG+V G + AI + K ++ E EF E + H+ LVQL
Sbjct: 19 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQL 75
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRVRISLEIARGLVYLHEECNVPI 627
G C + ++ E+M NG L N + + + + + ++ + YL +
Sbjct: 76 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QF 132
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAK 687
+H D+ +N L+++ K+SDFGLS+ +L D+ + + + PE + S+K
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 192
Query: 688 VDVYSFGVMLLEI 700
D+++FGV++ EI
Sbjct: 193 SDIWAFGVLMWEI 205
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 7/193 (3%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
F +ELG G FG+V G + AI + K ++ E EF E + H+ LVQL
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQL 69
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRVRISLEIARGLVYLHEECNVPI 627
G C + ++ E+M NG L N + + + + + ++ + YL +
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QF 126
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAK 687
+H D+ +N L+++ K+SDFGLS+ +L D+ + + + PE + S+K
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 186
Query: 688 VDVYSFGVMLLEI 700
D+++FGV++ EI
Sbjct: 187 SDIWAFGVLMWEI 199
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E+ T E LG G FG V+ G + +AVK L + + + F +E + + +
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSPD-AFLAEANLMKQL 65
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP---KPDWNLRVRISLEIARGLV 617
H+ LV+L + ++ E+M NG+L + + P K N + ++ +IA G+
Sbjct: 66 QHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 618 YLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 677
++ E IH D++ NIL+ + S KI+DFGL++L+ ++ + + APE
Sbjct: 124 FIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 678 WFKNAPVSAKVDVYSFGVMLLEIICCRR 705
+ K DV+SFG++L EI+ R
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 99/191 (51%), Gaps = 6/191 (3%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLG 570
E++G+G+ G VY + A+G+ +A+++++ Q ++ +E+ + + N+V L
Sbjct: 26 EKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 571 FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHC 630
+V E++ G+L +++ + + + E + L +LH +IH
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLHSN---QVIHR 140
Query: 631 DIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDV 690
DIK NILL S K++DFG + +QS+ TM+ GT ++APE KVD+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDI 199
Query: 691 YSFGVMLLEII 701
+S G+M +E+I
Sbjct: 200 WSLGIMAIEMI 210
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 14/200 (7%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQE-REREFKSEVSAIGRTHHKNLVQ 567
F++ LG G+F V K K +A+K + + A E +E ++E++ + + H N+V
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQ-KLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR--VRISLEIARGLVYLHEECNV 625
L + + L+ + + G L + I + K + R R+ ++ + YLH ++
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDAVKYLH---DL 135
Query: 626 PIIHCDIKPQNIL---LDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNA 682
I+H D+KP+N+L LD ISDFGLSK+ D + GT GYVAPE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 683 PVSAKVDVYSFGVMLLEIIC 702
P S VD +S GV+ ++C
Sbjct: 194 PYSKAVDCWSIGVIAYILLC 213
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E+ T E LG G FG V+ G + +AVK L + + + F +E + + +
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSPD-AFLAEANLMKQL 67
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP---KPDWNLRVRISLEIARGLV 617
H+ LV+L + ++ E+M NG+L + + P K N + ++ +IA G+
Sbjct: 68 QHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA 125
Query: 618 YLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 677
++ E IH D++ NIL+ + S KI+DFGL++L+ ++ + + APE
Sbjct: 126 FIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 182
Query: 678 WFKNAPVSAKVDVYSFGVMLLEIICCRR 705
+ K DV+SFG++L EI+ R
Sbjct: 183 AINYGTFTIKSDVWSFGILLTEIVTHGR 210
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 14/200 (7%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQE-REREFKSEVSAIGRTHHKNLVQ 567
F++ LG G+F V K K +A+K + + A E +E ++E++ + + H N+V
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQ-KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR--VRISLEIARGLVYLHEECNV 625
L + + L+ + + G L + I + K + R R+ ++ + YLH ++
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDAVKYLH---DL 135
Query: 626 PIIHCDIKPQNIL---LDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNA 682
I+H D+KP+N+L LD ISDFGLSK+ D + GT GYVAPE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 683 PVSAKVDVYSFGVMLLEIIC 702
P S VD +S GV+ ++C
Sbjct: 194 PYSKAVDCWSIGVIAYILLC 213
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 108/211 (51%), Gaps = 27/211 (12%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKL-------DRLAQEREREFKSEVSAIGRTH 561
+++++G+G FG+V+KG L +A+K L + E+ +EF+ EV + +
Sbjct: 23 YEKQIGKGGFGLVHKGRL-VKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 562 HKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP-DWNLRVRISLEIARGLVYLH 620
H N+V+L G +V EF+ G L + + P W++++R+ L+IA G+ Y+
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 621 EECNVPIIHCDIKPQNILLDNY-----FSAKISDFGLSKLLLSDQSRTHTM--IRGTRGY 673
+ N PI+H D++ NI L + AK++DF LS Q H++ + G +
Sbjct: 140 NQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS------QQSVHSVSGLLGNFQW 192
Query: 674 VAPEWF--KNAPVSAKVDVYSFGVMLLEIIC 702
+APE + + K D YSF ++L I+
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILT 223
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 14/200 (7%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQE-REREFKSEVSAIGRTHHKNLVQ 567
F++ LG G+F V K + K +A+K + + A E +E ++E++ + + H N+V
Sbjct: 22 FRDVLGTGAFSEVILAEDKR-TQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR--VRISLEIARGLVYLHEECNV 625
L + + L+ + + G L + I + K + R R+ ++ + YLH ++
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDAVKYLH---DL 135
Query: 626 PIIHCDIKPQNIL---LDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNA 682
I+H D+KP+N+L LD ISDFGLSK+ D + GT GYVAPE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 683 PVSAKVDVYSFGVMLLEIIC 702
P S VD +S GV+ ++C
Sbjct: 194 PYSKAVDCWSIGVIAYILLC 213
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 106/202 (52%), Gaps = 21/202 (10%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ--EREREFKSEVSAIGRTHHKNLVQL 568
+ +G GSFG VYKG +AVK L+ A ++ + FK+EV + +T H N++
Sbjct: 30 QRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+G+ ++ G+ +L + K + + I+ + ARG+ YLH + II
Sbjct: 86 MGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSR---THTM--IRGTRGYVAPEWFK--- 680
H D+K NI L + KI DFGL+ +++SR +H + G+ ++APE +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 681 NAPVSAKVDVYSFGVMLLEIIC 702
+ P S + DVY+FG++L E++
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMT 220
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 7/193 (3%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
F +ELG G FG+V G + AI + K ++ E EF E + H+ LVQL
Sbjct: 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQL 64
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRVRISLEIARGLVYLHEECNVPI 627
G C + ++ E+M NG L N + + + + + ++ + YL +
Sbjct: 65 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QF 121
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAK 687
+H D+ +N L+++ K+SDFGLS+ +L D+ + + + PE + S+K
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 181
Query: 688 VDVYSFGVMLLEI 700
D+++FGV++ EI
Sbjct: 182 SDIWAFGVLMWEI 194
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E+ T E LG G FG V+ G + +AVK L + + + F +E + + +
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSPD-AFLAEANLMKQL 65
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP---KPDWNLRVRISLEIARGLV 617
H+ LV+L + ++ E+M NG+L + + P K N + ++ +IA G+
Sbjct: 66 QHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 618 YLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 677
++ E IH D++ NIL+ + S KI+DFGL++L+ ++ + + APE
Sbjct: 124 FIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 678 WFKNAPVSAKVDVYSFGVMLLEIICCRR 705
+ K DV+SFG++L EI+ R
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E+ T E LG G FG V+ G + +AVK L + + + F +E + + +
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSPD-AFLAEANLMKQL 66
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP---KPDWNLRVRISLEIARGLV 617
H+ LV+L + ++ E+M NG+L + + P K N + ++ +IA G+
Sbjct: 67 QHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA 124
Query: 618 YLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 677
++ E IH D++ NIL+ + S KI+DFGL++L+ ++ + + APE
Sbjct: 125 FIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 181
Query: 678 WFKNAPVSAKVDVYSFGVMLLEIICCRR 705
+ K DV+SFG++L EI+ R
Sbjct: 182 AINYGTFTIKSDVWSFGILLTEIVTHGR 209
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E+ T E LG G FG V+ G + +AVK L + + + F +E + + +
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSPD-AFLAEANLMKQL 71
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP---KPDWNLRVRISLEIARGLV 617
H+ LV+L + ++ E+M NG+L + + P K N + ++ +IA G+
Sbjct: 72 QHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA 129
Query: 618 YLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 677
++ E IH D++ NIL+ + S KI+DFGL++L+ ++ + + APE
Sbjct: 130 FIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 186
Query: 678 WFKNAPVSAKVDVYSFGVMLLEIICCRR 705
+ K DV+SFG++L EI+ R
Sbjct: 187 AINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 101/195 (51%), Gaps = 19/195 (9%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVK--KLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
+ +G+G FG V +L G +AVK K D AQ F +E S + + H NLVQL
Sbjct: 18 QTIGKGEFGDV---MLGDYRGNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQL 70
Query: 569 LGFCDEALNRL-LVYEFMGNGTLANLIFAIPKP--DWNLRVRISLEIARGLVYLHEECNV 625
LG E L +V E+M G+L + + + + + ++ SL++ + YL E N
Sbjct: 71 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL--EGN- 127
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+H D+ +N+L+ AK+SDFGL+K S Q ++ + APE + A S
Sbjct: 128 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAPEALREAAFS 183
Query: 686 AKVDVYSFGVMLLEI 700
K DV+SFG++L EI
Sbjct: 184 TKSDVWSFGILLWEI 198
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E+ T E LG G FG V+ G + +AVK L + + + F +E + + +
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSPD-AFLAEANLMKQL 75
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP---KPDWNLRVRISLEIARGLV 617
H+ LV+L + ++ E+M NG+L + + P K N + ++ +IA G+
Sbjct: 76 QHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA 133
Query: 618 YLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 677
++ E IH D++ NIL+ + S KI+DFGL++L+ ++ + + APE
Sbjct: 134 FIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 190
Query: 678 WFKNAPVSAKVDVYSFGVMLLEIICCRR 705
+ K DV+SFG++L EI+ R
Sbjct: 191 AINYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E+ T E LG G FG V+ G + +AVK L + + + F +E + + +
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSPD-AFLAEANLMKQL 70
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP---KPDWNLRVRISLEIARGLV 617
H+ LV+L + ++ E+M NG+L + + P K N + ++ +IA G+
Sbjct: 71 QHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA 128
Query: 618 YLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 677
++ E IH D++ NIL+ + S KI+DFGL++L+ ++ + + APE
Sbjct: 129 FIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 185
Query: 678 WFKNAPVSAKVDVYSFGVMLLEIICCRR 705
+ K DV+SFG++L EI+ R
Sbjct: 186 AINYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 14/200 (7%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQE-REREFKSEVSAIGRTHHKNLVQ 567
F++ LG G+F V K + K +A+K + + A E +E ++E++ + + H N+V
Sbjct: 22 FRDVLGTGAFSEVILAEDKR-TQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR--VRISLEIARGLVYLHEECNV 625
L + + L+ + + G L + I + K + R R+ ++ + YLH ++
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDAVKYLH---DL 135
Query: 626 PIIHCDIKPQNIL---LDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNA 682
I+H D+KP+N+L LD ISDFGLSK+ D + GT GYVAPE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 683 PVSAKVDVYSFGVMLLEIIC 702
P S VD +S GV+ ++C
Sbjct: 194 PYSKAVDCWSIGVIAYILLC 213
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E+ T E LG G FG V+ G + +AVK L + + + F +E + + +
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSPD-AFLAEANLMKQL 65
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP---KPDWNLRVRISLEIARGLV 617
H+ LV+L + ++ E+M NG+L + + P K N + ++ +IA G+
Sbjct: 66 QHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 618 YLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 677
++ E IH D++ NIL+ + S KI+DFGL++L+ ++ + + APE
Sbjct: 124 FIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 180
Query: 678 WFKNAPVSAKVDVYSFGVMLLEIICCRR 705
+ K DV+SFG++L EI+ R
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 130/288 (45%), Gaps = 39/288 (13%)
Query: 513 LGRGSFGIVYKGVLKSASGKA--IAVK--KLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
LG G FG V +G LK G + +AVK KLD +Q EF SE + + H N+++L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 569 LGFCDEALNR-----LLVYEFMGNGTLANLIF-----AIPK--PDWNLRVRISLEIARGL 616
LG C E ++ +++ FM G L + PK P L ++ ++IA G+
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL-LKFMVDIALGM 160
Query: 617 VYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTMIRGTRGYVA 675
YL N +H D+ +N +L + + ++DFGLSK + S D R + + ++A
Sbjct: 161 EYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 676 PEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEG-RLDV 734
E + ++K DV++FGV + EI + V+ YD G RL
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE-------MYDYLLHGHRLKQ 270
Query: 735 LVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLE 782
D L + I C R DP RPT V+ LE LLE
Sbjct: 271 PEDC----------LDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 106/213 (49%), Gaps = 19/213 (8%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGK--AIAVKKLDRLAQERER-EFKSEVSAI 557
E++ + ++ +G G G V G L+ + +A+K L ER+R +F SE S +
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLE 611
G+ H N+++L G ++V E+M NG+L + F I + LR
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR-----G 159
Query: 612 IARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR 671
+ G+ YL ++ +H D+ +N+L+D+ K+SDFGLS++L D +T G
Sbjct: 160 VGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI 216
Query: 672 G--YVAPEWFKNAPVSAKVDVYSFGVMLLEIIC 702
+ APE S+ DV+SFGV++ E++
Sbjct: 217 PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ--EREREFKSEVSAIGRTHHKNLVQL 568
+ +G GSFG VYKG +AVK L+ A ++ + FK+EV + +T H N++
Sbjct: 19 QRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 74
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+G+ + ++ G+ +L K + + I+ + A+G+ YLH + II
Sbjct: 75 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 131
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM--IRGTRGYVAPEWFK---NAP 683
H D+K NI L + KI DFGL+ + S S +H + G+ ++APE + P
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 684 VSAKVDVYSFGVMLLEIIC 702
S + DVY+FG++L E++
Sbjct: 191 YSFQSDVYAFGIVLYELMT 209
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ--EREREFKSEVSAIGRTHHKNLVQL 568
+ +G GSFG VYKG +AVK L+ A ++ + FK+EV + +T H N++
Sbjct: 42 QRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+G+ + ++ G+ +L K + + I+ + A+G+ YLH + II
Sbjct: 98 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM--IRGTRGYVAPEWFK---NAP 683
H D+K NI L + KI DFGL+ + S S +H + G+ ++APE + P
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 684 VSAKVDVYSFGVMLLEIIC 702
S + DVY+FG++L E++
Sbjct: 214 YSFQSDVYAFGIVLYELMT 232
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ--EREREFKSEVSAIGRTHHKNLVQL 568
+ +G GSFG VYKG +AVK L+ A ++ + FK+EV + +T H N++
Sbjct: 19 QRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 74
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+G+ + ++ G+ +L K + + I+ + A+G+ YLH + II
Sbjct: 75 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 131
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM--IRGTRGYVAPEWFK---NAP 683
H D+K NI L + KI DFGL+ + S S +H + G+ ++APE + P
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 684 VSAKVDVYSFGVMLLEIIC 702
S + DVY+FG++L E++
Sbjct: 191 YSFQSDVYAFGIVLYELMT 209
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ--EREREFKSEVSAIGRTHHKNLVQL 568
+ +G GSFG VYKG +AVK L+ A ++ + FK+EV + +T H N++
Sbjct: 16 QRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 71
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+G+ + ++ G+ +L K + + I+ + A+G+ YLH + II
Sbjct: 72 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 128
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM--IRGTRGYVAPEWFK---NAP 683
H D+K NI L + KI DFGL+ + S S +H + G+ ++APE + P
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 684 VSAKVDVYSFGVMLLEIIC 702
S + DVY+FG++L E++
Sbjct: 188 YSFQSDVYAFGIVLYELMT 206
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ--EREREFKSEVSAIGRTHHKNLVQL 568
+ +G GSFG VYKG +AVK L+ A ++ + FK+EV + +T H N++
Sbjct: 14 QRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+G+ + ++ G+ +L K + + I+ + A+G+ YLH + II
Sbjct: 70 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM--IRGTRGYVAPEWFK---NAP 683
H D+K NI L + KI DFGL+ + S S +H + G+ ++APE + P
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 684 VSAKVDVYSFGVMLLEIIC 702
S + DVY+FG++L E++
Sbjct: 186 YSFQSDVYAFGIVLYELMT 204
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 137/290 (47%), Gaps = 41/290 (14%)
Query: 509 FKEELGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRT-HH 562
F + LG G+FG V + G+ K + +AVK L A E+E SE+ + H
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 563 KNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWN--------LR--VRISLEI 612
+N+V LLG C L++ E+ G L N + + D + LR + S ++
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR- 671
A+G+ +L + IH D+ +N+LL N AKI DFGL++ +++D ++ +++G
Sbjct: 162 AQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND---SNYIVKGNAR 215
Query: 672 ---GYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYA 728
++APE + + + DV+S+G++L EI + + ++ Y
Sbjct: 216 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF------SLGLNPYPGILVNSKFYKLVK 269
Query: 729 EGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLE 778
+G +PA A ++ +M A W + +P+ RPT + + L+
Sbjct: 270 DG-----YQMAQPAFAPKNIYS--IMQACWAL--EPTHRPTFQQICSFLQ 310
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ--EREREFKSEVSAIGRTHHKNLVQL 568
+ +G GSFG VYKG +AVK L+ A ++ + FK+EV + +T H N++
Sbjct: 41 QRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 96
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+G+ + ++ G+ +L K + + I+ + A+G+ YLH + II
Sbjct: 97 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 153
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM--IRGTRGYVAPEWFK---NAP 683
H D+K NI L + KI DFGL+ + S S +H + G+ ++APE + P
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 212
Query: 684 VSAKVDVYSFGVMLLEIIC 702
S + DVY+FG++L E++
Sbjct: 213 YSFQSDVYAFGIVLYELMT 231
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E+ T E LG G FG V+ G + +AVK L + + + F +E + + +
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSPD-AFLAEANLMKQL 60
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP---KPDWNLRVRISLEIARGLV 617
H+ LV+L + ++ E+M NG+L + + P K N + ++ +IA G+
Sbjct: 61 QHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA 118
Query: 618 YLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 677
++ E IH D++ NIL+ + S KI+DFGL++L+ ++ + + APE
Sbjct: 119 FIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 175
Query: 678 WFKNAPVSAKVDVYSFGVMLLEIICCRR 705
+ K DV+SFG++L EI+ R
Sbjct: 176 AINYGTFTIKSDVWSFGILLTEIVTHGR 203
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 137/290 (47%), Gaps = 41/290 (14%)
Query: 509 FKEELGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRT-HH 562
F + LG G+FG V + G+ K + +AVK L A E+E SE+ + H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 563 KNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWN--------LR--VRISLEI 612
+N+V LLG C L++ E+ G L N + + D + LR + S ++
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR- 671
A+G+ +L + IH D+ +N+LL N AKI DFGL++ +++D ++ +++G
Sbjct: 170 AQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND---SNYIVKGNAR 223
Query: 672 ---GYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYA 728
++APE + + + DV+S+G++L EI + + ++ Y
Sbjct: 224 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF------SLGLNPYPGILVNSKFYKLVK 277
Query: 729 EGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLE 778
+G +PA A ++ +M A W + +P+ RPT + + L+
Sbjct: 278 DG-----YQMAQPAFAPKNIYS--IMQACWAL--EPTHRPTFQQICSFLQ 318
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 100/195 (51%), Gaps = 19/195 (9%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVK--KLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
+ +G+G FG V +L G +AVK K D AQ F +E S + + H NLVQL
Sbjct: 199 QTIGKGEFGDV---MLGDYRGNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQL 251
Query: 569 LGFCDEALNRL-LVYEFMGNGTLANLIFAIPKP--DWNLRVRISLEIARGLVYLHEECNV 625
LG E L +V E+M G+L + + + + + ++ SL++ + YL E N
Sbjct: 252 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL--EGN- 308
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+H D+ +N+L+ AK+SDFGL+K S Q ++ T APE + S
Sbjct: 309 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFS 364
Query: 686 AKVDVYSFGVMLLEI 700
K DV+SFG++L EI
Sbjct: 365 TKSDVWSFGILLWEI 379
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 21/202 (10%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ--EREREFKSEVSAIGRTHHKNLVQL 568
+ +G GSFG VYKG +AVK L+ A ++ + FK+EV + +T H N++
Sbjct: 42 QRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+G+ + ++ G+ +L K + + I+ + A+G+ YLH + II
Sbjct: 98 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSR---THTM--IRGTRGYVAPEWFK--- 680
H D+K NI L + KI DFGL+ +++SR +H + G+ ++APE +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 681 NAPVSAKVDVYSFGVMLLEIIC 702
P S + DVY+FG++L E++
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMT 232
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 47/290 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAI--AVKKLDR-LAQEREREFKSEVSAIGRTHHKNLVQLL 569
+G G FG V G LK + I A+K L ++ R+F SE S +G+ H N++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLEIARGLVYLHEEC 623
G + +++ E+M NG+L + F + + LR I G+ YL
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR-----GIGSGMKYLS--- 148
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG------YVAPE 677
++ +H D+ +NIL+++ K+SDFG+S++L D +T TRG + APE
Sbjct: 149 DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT----TRGGKIPIRWTAPE 204
Query: 678 WFKNAPVSAKVDVYSFGVMLLEIICC--RRSVEMEVEEEGRAILTDWAYDCYAEGRLDVL 735
++ DV+S+G+++ E++ R +M ++ +AI + RL
Sbjct: 205 AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY--------RL--- 253
Query: 736 VDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVPN 785
P D LM+ W +++ S RP ++ ML+ L+ PN
Sbjct: 254 -----PPPMDCPIALHQLMLDCW--QKERSDRPKFGQIVNMLDKLIRNPN 296
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 21/202 (10%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ--EREREFKSEVSAIGRTHHKNLVQL 568
+ +G GSFG VYKG +AVK L+ A ++ + FK+EV + +T H N++
Sbjct: 34 QRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 89
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+G+ + ++ G+ +L K + + I+ + A+G+ YLH + II
Sbjct: 90 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 146
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSR---THTM--IRGTRGYVAPEWFK--- 680
H D+K NI L + KI DFGL+ +++SR +H + G+ ++APE +
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 681 NAPVSAKVDVYSFGVMLLEIIC 702
P S + DVY+FG++L E++
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMT 224
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 15/211 (7%)
Query: 499 YNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIG 558
Y E++ + +G GSFG VYKG K A+ + K+ E+ + F++EV+ +
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVYKG--KWHGDVAVKILKVVDPTPEQFQAFRNEVAVLR 87
Query: 559 RTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVY 618
+T H N++ +G+ + ++ G+ +L K + I+ + A+G+ Y
Sbjct: 88 KTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDY 147
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGL----SKLLLSDQSRTHTMIRGTRGYV 674
LH + IIH D+K NI L + KI DFGL S+ S Q T G+ ++
Sbjct: 148 LHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT---GSVLWM 201
Query: 675 APEWFK---NAPVSAKVDVYSFGVMLLEIIC 702
APE + N P S + DVYS+G++L E++
Sbjct: 202 APEVIRMQDNNPFSFQSDVYSYGIVLYELMT 232
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 21/202 (10%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ--EREREFKSEVSAIGRTHHKNLVQL 568
+ +G GSFG VYKG +AVK L+ A ++ + FK+EV + +T H N++
Sbjct: 14 QRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+G+ + ++ G+ +L K + + I+ + A+G+ YLH + II
Sbjct: 70 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSR---THTM--IRGTRGYVAPEWFK--- 680
H D+K NI L + KI DFGL+ +++SR +H + G+ ++APE +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 681 NAPVSAKVDVYSFGVMLLEIIC 702
P S + DVY+FG++L E++
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMT 204
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 27/204 (13%)
Query: 513 LGRGSFGIVYKGVLKSASGKA--IAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLVQLL 569
+G G FG V G LK + +A+K L E++R +F E S +G+ H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLEIARGLVYLHEEC 623
G ++ ++V E+M NG+L + F + + LR I+ G+ YL
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR-----GISAGMKYL---S 141
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG------YVAPE 677
++ +H D+ +NIL+++ K+SDFGLS++L D +T TRG + APE
Sbjct: 142 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TRGGKIPIRWTAPE 197
Query: 678 WFKNAPVSAKVDVYSFGVMLLEII 701
++ DV+S+G+++ E++
Sbjct: 198 AIAFRKFTSASDVWSYGIVMWEVV 221
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
EELG G+FG+V++ V + A+G A K + + + + E+ + H LV L
Sbjct: 161 IHEELGTGAFGVVHR-VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL 219
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
++ +++YEFM G L + K + V ++ +GL ++HE
Sbjct: 220 HDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---Y 276
Query: 628 IHCDIKPQNILLDNYFS--AKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+H D+KP+NI+ S K+ DFGL+ L QS T GT + APE + PV
Sbjct: 277 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEVAEGKPVG 334
Query: 686 AKVDVYSFGVM 696
D++S GV+
Sbjct: 335 YYTDMWSVGVL 345
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ--EREREFKSEVSAIGRTHHKNLVQL 568
+ +G GSFG VYKG +AVK L+ A ++ + FK+EV + +T H N++
Sbjct: 14 QRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+G+ ++ G+ +L K + + I+ + A+G+ YLH + II
Sbjct: 70 MGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM--IRGTRGYVAPEWFK---NAP 683
H D+K NI L + KI DFGL+ + S S +H + G+ ++APE + P
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 684 VSAKVDVYSFGVMLLEIIC 702
S + DVY+FG++L E++
Sbjct: 186 YSFQSDVYAFGIVLYELMT 204
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 139/303 (45%), Gaps = 47/303 (15%)
Query: 500 NELKEATGGFKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDR-LAQEREREFKSEVSA 556
E+ + ++ +G G FG V G LK + I A+K L ++ R+F SE S
Sbjct: 3 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 62
Query: 557 IGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISL 610
+G+ H N++ L G + +++ E+M NG+L + F + + LR
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR----- 117
Query: 611 EIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGT 670
I G+ YL ++ +H D+ +NIL+++ K+SDFG+S++L D +T T
Sbjct: 118 GIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT----T 170
Query: 671 RG------YVAPEWFKNAPVSAKVDVYSFGVMLLEIICC--RRSVEMEVEEEGRAILTDW 722
RG + APE ++ DV+S+G+++ E++ R +M ++ +AI +
Sbjct: 171 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY 230
Query: 723 AYDCYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLE 782
RL P D LM+ W +++ S RP ++ ML+ L+
Sbjct: 231 --------RL--------PPPMDCPIALHQLMLDCW--QKERSDRPKFGQIVNMLDKLIR 272
Query: 783 VPN 785
PN
Sbjct: 273 NPN 275
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 109/200 (54%), Gaps = 15/200 (7%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE---REFKSEVSAIGRTHHKNLVQ 567
E++G G++G+VYK K + G+ +A+K++ RL E E E+S + HH N+V
Sbjct: 27 EKVGEGTYGVVYKA--KDSQGRIVALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVS 83
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLHEECNVP 626
L+ LV+EFM L ++ + +++I L ++ RG+ + H+
Sbjct: 84 LIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---R 139
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNA-PV 684
I+H D+KPQN+L+++ + K++DFGL++ + +S TH ++ T Y AP+ +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVLMGSKKY 197
Query: 685 SAKVDVYSFGVMLLEIICCR 704
S VD++S G + E+I +
Sbjct: 198 STSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 109/200 (54%), Gaps = 15/200 (7%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE---REFKSEVSAIGRTHHKNLVQ 567
E++G G++G+VYK K + G+ +A+K++ RL E E E+S + HH N+V
Sbjct: 27 EKVGEGTYGVVYKA--KDSQGRIVALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVS 83
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLHEECNVP 626
L+ LV+EFM L ++ + +++I L ++ RG+ + H+
Sbjct: 84 LIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---R 139
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNA-PV 684
I+H D+KPQN+L+++ + K++DFGL++ + +S TH ++ T Y AP+ +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVLMGSKKY 197
Query: 685 SAKVDVYSFGVMLLEIICCR 704
S VD++S G + E+I +
Sbjct: 198 STSVDIWSIGCIFAEMITGK 217
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 100/195 (51%), Gaps = 19/195 (9%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVK--KLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
+ +G+G FG V +L G +AVK K D AQ F +E S + + H NLVQL
Sbjct: 27 QTIGKGEFGDV---MLGDYRGNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQL 79
Query: 569 LGFCDEALNRL-LVYEFMGNGTLANLIFAIPKP--DWNLRVRISLEIARGLVYLHEECNV 625
LG E L +V E+M G+L + + + + + ++ SL++ + YL E N
Sbjct: 80 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL--EGN- 136
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+H D+ +N+L+ AK+SDFGL+K S Q ++ T APE + S
Sbjct: 137 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFS 192
Query: 686 AKVDVYSFGVMLLEI 700
K DV+SFG++L EI
Sbjct: 193 TKSDVWSFGILLWEI 207
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 9/189 (4%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLG 570
EELG G+FG+V++ V + A+G A K + + + + E+ + H LV L
Sbjct: 57 EELGTGAFGVVHR-VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHD 115
Query: 571 FCDEALNRLLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
++ +++YEFM G L + K + V ++ +GL ++HE +H
Sbjct: 116 AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVH 172
Query: 630 CDIKPQNILLDNYFS--AKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAK 687
D+KP+NI+ S K+ DFGL+ L QS T GT + APE + PV
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEVAEGKPVGYY 230
Query: 688 VDVYSFGVM 696
D++S GV+
Sbjct: 231 TDMWSVGVL 239
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 139/303 (45%), Gaps = 47/303 (15%)
Query: 500 NELKEATGGFKEELGRGSFGIVYKGVLKSASGKAI--AVKKLDR-LAQEREREFKSEVSA 556
E+ + ++ +G G FG V G LK + I A+K L ++ R+F SE S
Sbjct: 9 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 68
Query: 557 IGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISL 610
+G+ H N++ L G + +++ E+M NG+L + F + + LR
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR----- 123
Query: 611 EIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGT 670
I G+ YL ++ +H D+ +NIL+++ K+SDFG+S++L D +T T
Sbjct: 124 GIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT----T 176
Query: 671 RG------YVAPEWFKNAPVSAKVDVYSFGVMLLEIICC--RRSVEMEVEEEGRAILTDW 722
RG + APE ++ DV+S+G+++ E++ R +M ++ +AI +
Sbjct: 177 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY 236
Query: 723 AYDCYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLE 782
RL P D LM+ W +++ S RP ++ ML+ L+
Sbjct: 237 --------RL--------PPPMDCPIALHQLMLDCW--QKERSDRPKFGQIVNMLDKLIR 278
Query: 783 VPN 785
PN
Sbjct: 279 NPN 281
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKL---DRLAQEREREFKSEVSAIGRTHHKNLVQ 567
++LG G VY + K +A+K + R +E + F+ EV + H+N+V
Sbjct: 17 DKLGGGGMSTVYLAEDTILNIK-VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
++ +E LV E++ TL+ I + + + + +I G+ + H ++ I
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH---DMRI 132
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEWFKNAPVSA 686
+H DIKPQNIL+D+ + KI DFG++K LS+ S T T + GT Y +PE K
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAK-ALSETSLTQTNHVLGTVQYFSPEQAKGEATDE 191
Query: 687 KVDVYSFGVMLLEIIC 702
D+YS G++L E++
Sbjct: 192 CTDIYSIGIVLYEMLV 207
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 19/213 (8%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGK--AIAVKKLDRLAQERER-EFKSEVSAI 557
E++ + ++ +G G G V G L+ + +A+K L ER+R +F SE S +
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLE 611
G+ H N+++L G ++V E+M NG+L + F I + LR
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR-----G 159
Query: 612 IARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR 671
+ G+ YL ++ +H D+ +N+L+D+ K+SDFGLS++L D T G
Sbjct: 160 VGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI 216
Query: 672 G--YVAPEWFKNAPVSAKVDVYSFGVMLLEIIC 702
+ APE S+ DV+SFGV++ E++
Sbjct: 217 PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 99/191 (51%), Gaps = 6/191 (3%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLG 570
E++G+G+ G VY + A+G+ +A+++++ Q ++ +E+ + + N+V L
Sbjct: 27 EKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 85
Query: 571 FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHC 630
+V E++ G+L +++ + + + E + L +LH +IH
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLHSN---QVIHR 141
Query: 631 DIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDV 690
+IK NILL S K++DFG + +QS+ TM+ GT ++APE KVD+
Sbjct: 142 NIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDI 200
Query: 691 YSFGVMLLEII 701
+S G+M +E+I
Sbjct: 201 WSLGIMAIEMI 211
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 98/191 (51%), Gaps = 6/191 (3%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLG 570
E++G+G+ G VY + A+G+ +A+++++ Q ++ +E+ + + N+V L
Sbjct: 26 EKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 571 FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHC 630
+V E++ G+L +++ + + + E + L +LH +IH
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLHSN---QVIHR 140
Query: 631 DIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDV 690
DIK NILL S K++DFG + +QS+ M+ GT ++APE KVD+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAYGPKVDI 199
Query: 691 YSFGVMLLEII 701
+S G+M +E+I
Sbjct: 200 WSLGIMAIEMI 210
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 98/191 (51%), Gaps = 6/191 (3%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLG 570
E++G+G+ G VY + A+G+ +A+++++ Q ++ +E+ + + N+V L
Sbjct: 26 EKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 571 FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHC 630
+V E++ G+L +++ + + + E + L +LH +IH
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLHSN---QVIHR 140
Query: 631 DIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDV 690
DIK NILL S K++DFG + +QS+ M+ GT ++APE KVD+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDI 199
Query: 691 YSFGVMLLEII 701
+S G+M +E+I
Sbjct: 200 WSLGIMAIEMI 210
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 98/191 (51%), Gaps = 6/191 (3%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLG 570
E++G+G+ G VY + A+G+ +A+++++ Q ++ +E+ + + N+V L
Sbjct: 27 EKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 85
Query: 571 FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHC 630
+V E++ G+L +++ + + + E + L +LH +IH
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLHSN---QVIHR 141
Query: 631 DIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDV 690
DIK NILL S K++DFG + +QS+ M+ GT ++APE KVD+
Sbjct: 142 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDI 200
Query: 691 YSFGVMLLEII 701
+S G+M +E+I
Sbjct: 201 WSLGIMAIEMI 211
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 100/195 (51%), Gaps = 19/195 (9%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVK--KLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
+ +G+G FG V +L G +AVK K D AQ F +E S + + H NLVQL
Sbjct: 12 QTIGKGEFGDV---MLGDYRGNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQL 64
Query: 569 LGFCDEALNRL-LVYEFMGNGTLANLIFAIPKP--DWNLRVRISLEIARGLVYLHEECNV 625
LG E L +V E+M G+L + + + + + ++ SL++ + YL E N
Sbjct: 65 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL--EGN- 121
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+H D+ +N+L+ AK+SDFGL+K S Q ++ T APE + S
Sbjct: 122 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFS 177
Query: 686 AKVDVYSFGVMLLEI 700
K DV+SFG++L EI
Sbjct: 178 TKSDVWSFGILLWEI 192
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 10/205 (4%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY + S +A+K L + E+ E + + EV H N+++L
Sbjct: 20 LGKGKFGNVYLAR-ERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + + D E+A L Y H + +IH
Sbjct: 79 GYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK---RVIH 135
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + S T + GT Y+ PE + KVD
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEE 714
++S GV+ E + E +E
Sbjct: 193 LWSLGVLCYEFLVGMPPFEAHTYQE 217
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 10/205 (4%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY + S +A+K L + E+ E + + EV H N+++L
Sbjct: 20 LGKGKFGNVYLAR-ERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
G+ +A L+ E+ GT+ + + + D E+A L Y H + +IH
Sbjct: 79 GYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK---RVIH 135
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL + KI+DFG S + + SR T+ GT Y+ PE + KVD
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLC-GTLDYLPPEMIEGRMHDEKVD 192
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEE 714
++S GV+ E + E +E
Sbjct: 193 LWSLGVLCYEFLVGMPPFEAHTYQE 217
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAI--AVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQLL 569
+G+G FG+VY G + I A+K L R+ + ++ E F E + +H N++ L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 570 GFC--DEALNRLLVYEFMGNGTLANLIFAIPK-PDWNLRVRISLEIARGLVYLHEECNVP 626
G E L +L+ +M +G L I + + P + L++ARG+ YL E+
Sbjct: 89 GIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---K 144
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQ---SRTHTMIRGTRGYVAPEWFKNAP 683
+H D+ +N +LD F+ K++DFGL++ +L + + H R + A E +
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYR 204
Query: 684 VSAKVDVYSFGVMLLEII 701
+ K DV+SFGV+L E++
Sbjct: 205 FTTKSDVWSFGVLLWELL 222
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E+ T E LG G FG V+ G + +AVK L + + + F +E + + +
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSPD-AFLAEANLMKQL 61
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP---KPDWNLRVRISLEIARGLV 617
H+ LV+L + ++ E+M NG+L + + P K N + ++ +IA G+
Sbjct: 62 QHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA 119
Query: 618 YLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 677
++ E IH +++ NIL+ + S KI+DFGL++L+ ++ + + APE
Sbjct: 120 FIEERN---YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 176
Query: 678 WFKNAPVSAKVDVYSFGVMLLEIICCRR 705
+ K DV+SFG++L EI+ R
Sbjct: 177 AINYGTFTIKSDVWSFGILLTEIVTHGR 204
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 13/195 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLG-F 571
LG+G++GIVY G S + IA+K++ + E++ HKN+VQ LG F
Sbjct: 30 LGKGTYGIVYAGRDLSNQVR-IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 572 CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL---EIARGLVYLHEECNVPII 628
+ ++ + + G G+L+ L+ + P + I +I GL YLH+ I+
Sbjct: 89 SENGFIKIFMEQVPG-GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIV 144
Query: 629 HCDIKPQNILLDNYFSA-KISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP--VS 685
H DIK N+L++ Y KISDFG SK L T T GT Y+APE P
Sbjct: 145 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT-GTLQYMAPEIIDKGPRGYG 203
Query: 686 AKVDVYSFGVMLLEI 700
D++S G ++E+
Sbjct: 204 KAADIWSLGCTIIEM 218
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 122/246 (49%), Gaps = 18/246 (7%)
Query: 485 QDSSTSETNLRFFSYNELKEATGGFKEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLA 543
++SS + S N L F LG+GSFG ++ V ++ A+ V K D +
Sbjct: 3 KESSKEGNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVIL 62
Query: 544 QERERE---FKSEVSAIGRTHHKNLVQLLGFCDEALNRLL-VYEFMGNGTLANLIFAIPK 599
Q+ + E + + ++ R +H L QL C + +RL V EF+ G +L+F I K
Sbjct: 63 QDDDVECTMTEKRILSLAR-NHPFLTQLFC-CFQTPDRLFFVMEFVNGG---DLMFHIQK 117
Query: 600 PDW--NLRVRI-SLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL 656
R R + EI L++LH++ II+ D+K N+LLD+ K++DFG+ K
Sbjct: 118 SRRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174
Query: 657 LSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEE-G 715
+ + T T GT Y+APE + VD ++ GV+L E++C E E E++
Sbjct: 175 ICNGVTTATFC-GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLF 233
Query: 716 RAILTD 721
AIL D
Sbjct: 234 EAILND 239
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 512 ELGRGSFGIVYKGVLKSA-SGKAIAVKKLDRLAQER-----------EREFKSEVSAIGR 559
+LG G++G V K+ S KAI V K + + R E +E+S +
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 560 THHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYL 619
H N+++L ++ LV EF G L I K D I +I G+ YL
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYL 162
Query: 620 HEECNVPIIHCDIKPQNILLDN---YFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAP 676
H+ I+H DIKP+NILL+N + KI DFGLS D + GT Y+AP
Sbjct: 163 HKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL--GTAYYIAP 217
Query: 677 EWFKNAPVSAKVDVYSFGVMLLEIIC 702
E K + K DV+S GV++ ++C
Sbjct: 218 EVLK-KKYNEKCDVWSCGVIMYILLC 242
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 53/300 (17%)
Query: 509 FKEELGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRT-HH 562
F + LG G+FG V + G++KS + +AVK L A ERE SE+ + +H
Sbjct: 50 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 563 KNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRV---------- 606
N+V LLG C L++ E+ G L N + F K +
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 607 --RISLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRT 663
S ++A+G+ +L + C IH D+ +NILL + KI DFGL++ + +D +
Sbjct: 170 LLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARHIKND---S 222
Query: 664 HTMIRGTR----GYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAIL 719
+ +++G ++APE N + + DV+S+G+ L E+ S + + +
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--- 279
Query: 720 TDWAYDCYAEGRLDVLVDSDEPA-MADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLE 778
Y EG +L PA M D I C DP KRPT K ++Q++E
Sbjct: 280 ---FYKMIKEG-FRMLSPEHAPAEMYD---------IMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
ELG G+FG VYK K S A A K +D ++E ++ E+ + H N+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLA-AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 572 CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLHEECNVPIIHC 630
N ++ EF G + ++ + +P ++++ + L YLH+ IIH
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHR 159
Query: 631 DIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF-----KNAPVS 685
D+K NIL K++DFG+S R + I GT ++APE K+ P
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-GTPYWMAPEVVMCETSKDRPYD 218
Query: 686 AKVDVYSFGVMLLEI 700
K DV+S G+ L+E+
Sbjct: 219 YKADVWSLGITLIEM 233
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 136/297 (45%), Gaps = 49/297 (16%)
Query: 509 FKEELGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRT-HH 562
F + LG G+FG V + G+ K + +AVK L A E+E SE+ + H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 563 KNLVQLLGFCDEALNRLLVYEFMGNGTLANLIF------------AIPKPDWNLRVR--- 607
+N+V LLG C L++ E+ G L N + P+ L R
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 608 -ISLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT 665
S ++A+G+ +L + C IH D+ +N+LL N AKI DFGL++ +++D ++
Sbjct: 170 HFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMND---SNY 222
Query: 666 MIRGTR----GYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTD 721
+++G ++APE + + + DV+S+G++L EI + + ++
Sbjct: 223 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF------SLGLNPYPGILVNS 276
Query: 722 WAYDCYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLE 778
Y +G +PA A ++ +M A W + +P+ RPT + + L+
Sbjct: 277 KFYKLVKDG-----YQMAQPAFAPKNIYS--IMQACWAL--EPTHRPTFQQICSFLQ 324
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
ELG G+FG VYK K S A A K +D ++E ++ E+ + H N+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLA-AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 572 CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLHEECNVPIIHC 630
N ++ EF G + ++ + +P ++++ + L YLH+ IIH
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHR 159
Query: 631 DIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF-----KNAPVS 685
D+K NIL K++DFG+S R + I GT ++APE K+ P
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-GTPYWMAPEVVMCETSKDRPYD 218
Query: 686 AKVDVYSFGVMLLEI 700
K DV+S G+ L+E+
Sbjct: 219 YKADVWSLGITLIEM 233
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 11/208 (5%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E+ T E LG G G V+ G + +AVK L + + + F +E + + +
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHT--KVAVKSLKQGSMSPD-AFLAEANLMKQL 65
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP---KPDWNLRVRISLEIARGLV 617
H+ LV+L + ++ E+M NG+L + + P K N + ++ +IA G+
Sbjct: 66 QHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 618 YLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 677
++ E IH D++ NIL+ + S KI+DFGL++L+ + + + APE
Sbjct: 124 FIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPE 180
Query: 678 WFKNAPVSAKVDVYSFGVMLLEIICCRR 705
+ K DV+SFG++L EI+ R
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 13/195 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLG-F 571
LG+G++GIVY G S + IA+K++ + E++ HKN+VQ LG F
Sbjct: 16 LGKGTYGIVYAGRDLSNQVR-IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 572 CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL---EIARGLVYLHEECNVPII 628
+ ++ + + G G+L+ L+ + P + I +I GL YLH+ I+
Sbjct: 75 SENGFIKIFMEQVPG-GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIV 130
Query: 629 HCDIKPQNILLDNYFSA-KISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP--VS 685
H DIK N+L++ Y KISDFG SK L T T GT Y+APE P
Sbjct: 131 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT-GTLQYMAPEIIDKGPRGYG 189
Query: 686 AKVDVYSFGVMLLEI 700
D++S G ++E+
Sbjct: 190 KAADIWSLGCTIIEM 204
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 133/299 (44%), Gaps = 51/299 (17%)
Query: 509 FKEELGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRT-HH 562
F + LG G+FG V + G++KS + +AVK L A ERE SE+ + +H
Sbjct: 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 563 KNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRV---------- 606
N+V LLG C L++ E+ G L N + F K +
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 607 --RISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTH 664
S ++A+G+ +L + IH D+ +NILL + KI DFGL++ + +D ++
Sbjct: 147 LLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKND---SN 200
Query: 665 TMIRGTR----GYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILT 720
+++G ++APE N + + DV+S+G+ L E+ S + + +
Sbjct: 201 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK---- 256
Query: 721 DWAYDCYAEGRLDVLVDSDEPA-MADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLE 778
Y EG +L PA M D I C DP KRPT K ++Q++E
Sbjct: 257 --FYKMIKEG-FRMLSPEHAPAEMYD---------IMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 134/301 (44%), Gaps = 56/301 (18%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKA-IAVKKLDRLA-QEREREFKSEVSAIGRT-HHKNL 565
F++ +G G+FG V K +K + A+K++ A ++ R+F E+ + + HH N+
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLI-----------FAIPKPDWNLR-----VRIS 609
+ LLG C+ L E+ +G L + + FAI + + +
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 610 LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRG 669
++ARG+ YL ++ IH D+ +NIL+ + AKI+DFGLS+ + TM R
Sbjct: 149 ADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRL 203
Query: 670 TRGYVAPEWFKNAPVSAKVDVYSFGVMLLEII-------CCRRSVEMEVEEEGRAILTDW 722
++A E + + DV+S+GV+L EI+ C E+
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL------------- 250
Query: 723 AYDCYAEG-RLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLL 781
Y+ +G RL+ ++ D+ + C RE P +RP+ +L L +L
Sbjct: 251 -YEKLPQGYRLEKPLNCDDEVYD----------LMRQCWREKPYERPSFAQILVSLNRML 299
Query: 782 E 782
E
Sbjct: 300 E 300
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 130/293 (44%), Gaps = 42/293 (14%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERE-REFKSEVSA-IGRTHHKNLV 566
LGRG+FG V + G+ K+A+ + +AVK L A E R SE+ I HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 567 QLLGFCDEALNRLLV-YEFMGNGTLANLIFA-----IPKPDW-------NLRVRISLEIA 613
LLG C + L+V EF G L+ + + +P D + S ++A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 614 RGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM-IRGTRG 672
+G+ +L + IH D+ +NILL KI DFGL++ + D R
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 673 YVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVE--MEVEEEGRAILTDWAYDCYAEG 730
++APE + + + DV+SFGV+L EI S ++++EE L EG
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLK--------EG 263
Query: 731 RLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEV 783
D P M + C +PS+RPT +++ L LL+
Sbjct: 264 TRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 307
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 53/300 (17%)
Query: 509 FKEELGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRT-HH 562
F + LG G+FG V + G++KS + +AVK L A ERE SE+ + +H
Sbjct: 50 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 563 KNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRV---------- 606
N+V LLG C L++ E+ G L N + F K +
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 607 --RISLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRT 663
S ++A+G+ +L + C IH D+ +NILL + KI DFGL++ + +D +
Sbjct: 170 LLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKND---S 222
Query: 664 HTMIRGTR----GYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAIL 719
+ +++G ++APE N + + DV+S+G+ L E+ S + + +
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--- 279
Query: 720 TDWAYDCYAEGRLDVLVDSDEPA-MADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLE 778
Y EG +L PA M D I C DP KRPT K ++Q++E
Sbjct: 280 ---FYKMIKEG-FRMLSPEHAPAEMYD---------IMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 135/300 (45%), Gaps = 53/300 (17%)
Query: 509 FKEELGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRT-HH 562
F + LG G+FG V + G++KS + +AVK L A ERE SE+ + +H
Sbjct: 43 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 102
Query: 563 KNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRV---------- 606
N+V LLG C L++ E+ G L N + F K +
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 162
Query: 607 --RISLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRT 663
S ++A+G+ +L + C IH D+ +NILL + KI DFGL++ + +D +
Sbjct: 163 LLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKND---S 215
Query: 664 HTMIRGTR----GYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAIL 719
+ +++G ++APE N + + DV+S+G+ L E+ S G +
Sbjct: 216 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS-----PYPGMPVD 270
Query: 720 TDWAYDCYAEGRLDVLVDSDEPA-MADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLE 778
+ + Y EG +L PA M D I C DP KRPT K ++Q++E
Sbjct: 271 SKF-YKMIKEG-FRMLSPEHAPAEMYD---------IMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 16 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 73
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 74 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 130
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+T T Y APE
Sbjct: 131 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEILLGXK 186
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 135/301 (44%), Gaps = 56/301 (18%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKA-IAVKKLDRLA-QEREREFKSEVSAIGRT-HHKNL 565
F++ +G G+FG V K +K + A+K++ A ++ R+F E+ + + HH N+
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLI-----------FAIPKPDWNLR-----VRIS 609
+ LLG C+ L E+ +G L + + FAI + + +
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 610 LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRG 669
++ARG+ YL ++ IH D+ +NIL+ + AKI+DFGLS+ + TM R
Sbjct: 139 ADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRL 193
Query: 670 TRGYVAPEWFKNAPVSAKVDVYSFGVMLLEII-------CCRRSVEMEVEEEGRAILTDW 722
++A E + + DV+S+GV+L EI+ C E+
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL------------- 240
Query: 723 AYDCYAEG-RLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLL 781
Y+ +G RL+ ++ D+ LM W RE P +RP+ +L L +L
Sbjct: 241 -YEKLPQGYRLEKPLNCDDEVYD--------LMRQCW--REKPYERPSFAQILVSLNRML 289
Query: 782 E 782
E
Sbjct: 290 E 290
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQLL 569
LGRG FG V+ +K A+GK A KKL++ ++ + ++ E + + H + +V L
Sbjct: 193 LGRGGFGEVFACQMK-ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR----VRISLEIARGLVYLHEECNV 625
+ + LV M G + I+ + + + + + + +I GL +LH+
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-- 309
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
II+ D+KP+N+LLD+ + +ISD GL+ L + Q++T GT G++APE
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GTPGFMAPELLLGEEYD 367
Query: 686 AKVDVYSFGVMLLEIICCR 704
VD ++ GV L E+I R
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQLL 569
LGRG FG V+ +K A+GK A KKL++ ++ + ++ E + + H + +V L
Sbjct: 193 LGRGGFGEVFACQMK-ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR----VRISLEIARGLVYLHEECNV 625
+ + LV M G + I+ + + + + + + +I GL +LH+
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-- 309
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
II+ D+KP+N+LLD+ + +ISD GL+ L + Q++T GT G++APE
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GTPGFMAPELLLGEEYD 367
Query: 686 AKVDVYSFGVMLLEIICCR 704
VD ++ GV L E+I R
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 18/201 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLD--RLAQEREREFKSEVSAIGRTHHKNLVQLLG 570
+G GS+G K + + + GK + K+LD + + ++ SEV+ + H N+V+
Sbjct: 14 IGTGSYGRCQK-IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR--- 69
Query: 571 FCDEALNR-----LLVYEFMGNGTLANLIFAIPKP------DWNLRVRISLEIARGLVYL 619
+ D ++R +V E+ G LA++I K ++ LRV L +A +
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 620 HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF 679
+ ++H D+KP N+ LD + K+ DFGL+++L D S T + GT Y++PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQM 188
Query: 680 KNAPVSAKVDVYSFGVMLLEI 700
+ K D++S G +L E+
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQLL 569
LGRG FG V+ +K A+GK A KKL++ ++ + ++ E + + H + +V L
Sbjct: 193 LGRGGFGEVFACQMK-ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR----VRISLEIARGLVYLHEECNV 625
+ + LV M G + I+ + + + + + + +I GL +LH+
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-- 309
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
II+ D+KP+N+LLD+ + +ISD GL+ L + Q++T GT G++APE
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GTPGFMAPELLLGEEYD 367
Query: 686 AKVDVYSFGVMLLEIICCR 704
VD ++ GV L E+I R
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 9 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 123
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+T T Y APE
Sbjct: 124 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEILLGXK 179
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQLL 569
LGRG FG V+ +K A+GK A KKL++ ++ + ++ E + + H + +V L
Sbjct: 193 LGRGGFGEVFACQMK-ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR----VRISLEIARGLVYLHEECNV 625
+ + LV M G + I+ + + + + + + +I GL +LH+
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR--- 308
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
II+ D+KP+N+LLD+ + +ISD GL+ L + Q++T GT G++APE
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GTPGFMAPELLLGEEYD 367
Query: 686 AKVDVYSFGVMLLEIICCR 704
VD ++ GV L E+I R
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
ELG G+FG VYK K S A A K +D ++E ++ E+ + H N+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLA-AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 572 CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLHEECNVPIIHC 630
N ++ EF G + ++ + +P ++++ + L YLH+ IIH
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHR 159
Query: 631 DIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF-----KNAPVS 685
D+K NIL K++DFG+S R I GT ++APE K+ P
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-GTPYWMAPEVVMCETSKDRPYD 218
Query: 686 AKVDVYSFGVMLLEI 700
K DV+S G+ L+E+
Sbjct: 219 YKADVWSLGITLIEM 233
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 16 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 73
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 74 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 130
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+T T Y APE
Sbjct: 131 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEILLGCK 186
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 13 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 70
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 71 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 127
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+T T Y APE
Sbjct: 128 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEILLGCK 183
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 53/300 (17%)
Query: 509 FKEELGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRT-HH 562
F + LG G+FG V + G++KS + +AVK L A ERE SE+ + +H
Sbjct: 45 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 104
Query: 563 KNLVQLLGFCDEALNRLLVYEFMGNGTLANLI------FAIPKPDWNLRV---------- 606
N+V LLG C L++ E+ G L N + F K +
Sbjct: 105 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 164
Query: 607 --RISLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRT 663
S ++A+G+ +L + C IH D+ +NILL + KI DFGL++ + +D +
Sbjct: 165 LLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKND---S 217
Query: 664 HTMIRGTR----GYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAIL 719
+ +++G ++APE N + + DV+S+G+ L E+ S + + +
Sbjct: 218 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--- 274
Query: 720 TDWAYDCYAEGRLDVLVDSDEPA-MADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLE 778
Y EG +L PA M D I C DP KRPT K ++Q++E
Sbjct: 275 ---FYKMIKEG-FRMLSPEHAPAEMYD---------IMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE---REFKSEVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E E+S + +H N+V+
Sbjct: 9 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 123
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+T T Y APE
Sbjct: 124 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRL---AQEREREFKSEVSAIGRTHHKNLVQ 567
+ LG G+FG V G +G +AVK L+R + + + + E+ + H ++++
Sbjct: 22 DTLGVGTFGKVKVGK-HELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
L + +V E++ G L + I + D R+ +I G+ Y H +
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM---V 137
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSA- 686
+H D+KP+N+LLD + +AKI+DFGLS ++ + + G+ Y APE +
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC--GSPNYAAPEVISGRLYAGP 195
Query: 687 KVDVYSFGVMLLEIIC 702
+VD++S GV+L ++C
Sbjct: 196 EVDIWSSGVILYALLC 211
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 10 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 68 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 124
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+T T Y APE
Sbjct: 125 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEILLGCK 180
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 8 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 66 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 122
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+T T Y APE
Sbjct: 123 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 9 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 123
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+T T Y APE
Sbjct: 124 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 8 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 66 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 122
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+T T Y APE
Sbjct: 123 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 130/295 (44%), Gaps = 44/295 (14%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERE-REFKSEVSA-IGRTHHKNLV 566
LGRG+FG V + G+ K+A+ + +AVK L A E R SE+ I HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 567 QLLGFCDEALNRLLV-YEFMGNGTLANLI------FAIPKPD--------WNLRVRISLE 611
LLG C + L+V EF G L+ + F KP+ + S +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 612 IARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM-IRGT 670
+A+G+ +L + IH D+ +NILL KI DFGL++ + D R
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 671 RGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVE--MEVEEEGRAILTDWAYDCYA 728
++APE + + + DV+SFGV+L EI S ++++EE L
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK-------- 265
Query: 729 EGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEV 783
EG D P M + C +PS+RPT +++ L LL+
Sbjct: 266 EGTRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 107/205 (52%), Gaps = 24/205 (11%)
Query: 514 GRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCD 573
RG FG V+K L + + +AVK + ++ + + EV ++ H+N++Q +G
Sbjct: 33 ARGRFGCVWKAQLLN---EYVAVKIFP-IQDKQSWQNEYEVYSLPGMKHENILQFIGAEK 88
Query: 574 EA----LNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC------ 623
++ L+ F G+L++ + A WN I+ +ARGL YLHE+
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 624 NVPII-HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSR--THTMIRGTRGYVAPEWFK 680
+ P I H DIK +N+LL N +A I+DFGL+ + +S TH + GTR Y+APE +
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQV-GTRRYMAPEVLE 206
Query: 681 NA-----PVSAKVDVYSFGVMLLEI 700
A ++D+Y+ G++L E+
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 128/282 (45%), Gaps = 43/282 (15%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE-REFKSEVSAIGRTHH-KNLVQLL 569
E+GRG++G V K V K SG+ +AVK++ E+E ++ ++ + R+ +VQ
Sbjct: 29 EIGRGAYGSVNKMVHK-PSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFY 87
Query: 570 GFCDEALNRLLVYEFMGNG-------TLANLIFAIPKPDWNLRVRISLEIARGLVYLHEE 622
G + + E M + L IP+ + +I+L + L +L E
Sbjct: 88 GALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPE---EILGKITLATVKALNHLKE- 143
Query: 623 CNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNA 682
N+ IIH DIKP NILLD + K+ DFG+S L+ ++T G R Y+APE +
Sbjct: 144 -NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA--GCRPYMAPERIDPS 200
Query: 683 P----VSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDW--AYDCYAEGRLDVLV 736
+ DV+S G+ L E+ GR W +D +L +V
Sbjct: 201 ASRQGYDVRSDVWSLGITLYELAT------------GRFPYPKWNSVFD-----QLTQVV 243
Query: 737 DSDEPAMA---DRSRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
D P ++ +R ++ C+ +D SKRP K +L+
Sbjct: 244 KGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 9 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLSFCHSHR 123
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+T T Y APE
Sbjct: 124 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 42/279 (15%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLG 570
+ELGRG F +V + + KS +G+ A K L + + R ++ ++E+ H +++L
Sbjct: 35 KELGRGKFAVVRQCISKS-TGQEYAAKFLKK--RRRGQDCRAEI-----LHEIAVLELAK 86
Query: 571 FCDEALNRLLVYEFMGNGTL------ANLIFAIPKPDW------NLRVRISLEIARGLVY 618
C +N VYE L IF++ P+ N +R+ +I G+ Y
Sbjct: 87 SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYY 146
Query: 619 LHEECNVPIIHCDIKPQNILLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
LH+ I+H D+KPQNILL + + KI DFG+S+ + + I GT Y+A
Sbjct: 147 LHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI--GHACELREIMGTPEYLA 201
Query: 676 PEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVL 735
PE P++ D+++ G++ ++ E +E ++ V
Sbjct: 202 PEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNIS------------QVN 249
Query: 736 VDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVL 774
VD E + S+L + ++ + ++P KRPT ++ L
Sbjct: 250 VDYSEETFSSVSQLATDFIQSL--LVKNPEKRPTAEICL 286
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 35/289 (12%)
Query: 513 LGRGSFGIVYKGVLKS----ASGKAIAVKKLDRLAQER-EREFKSEVSAIGRTHHKNLVQ 567
LG G+FG VY+G + S +AVK L + E+ E +F E I + +H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRV------RISLEIARGLVYLH 620
+G ++L R ++ E M G L + + P+P + ++ +IA G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 621 EECNVPIIHCDIKPQNILLDNYFS---AKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAP 676
E IH DI +N LL AKI DFG+++ + + R ++ P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 677 EWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLV 736
E F ++K D +SFGV+L EI M + + ++ + GR+D
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGY---MPYPSKSNQEVLEFV---TSGGRMDPPK 283
Query: 737 DSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVPN 785
+ P I C + P RP ++L+ +E + P+
Sbjct: 284 NCPGPVYR----------IMTQCWQHQPEDRPNFAIILERIEYCTQDPD 322
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 35/289 (12%)
Query: 513 LGRGSFGIVYKGVLKS----ASGKAIAVKKLDRLAQER-EREFKSEVSAIGRTHHKNLVQ 567
LG G+FG VY+G + S +AVK L + E+ E +F E I + +H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRV------RISLEIARGLVYLH 620
+G ++L R ++ E M G L + + P+P + ++ +IA G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 621 EECNVPIIHCDIKPQNILLDNYFS---AKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAP 676
E IH DI +N LL AKI DFG+++ + + R ++ P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 677 EWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLV 736
E F ++K D +SFGV+L EI M + + ++ + GR+D
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGY---MPYPSKSNQEVLEFV---TSGGRMDPPK 283
Query: 737 DSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVPN 785
+ P I C + P RP ++L+ +E + P+
Sbjct: 284 NCPGPVYR----------IMTQCWQHQPEDRPNFAIILERIEYCTQDPD 322
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 135/301 (44%), Gaps = 56/301 (18%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKA-IAVKKLDRLA-QEREREFKSEVSAIGRT-HHKNL 565
F++ +G G+FG V K +K + A+K++ A ++ R+F E+ + + HH N+
Sbjct: 26 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLI-----------FAIPKPDWNLR-----VRIS 609
+ LLG C+ L E+ +G L + + FAI + + +
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 610 LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRG 669
++ARG+ YL ++ IH ++ +NIL+ + AKI+DFGLS+ + TM R
Sbjct: 146 ADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRL 200
Query: 670 TRGYVAPEWFKNAPVSAKVDVYSFGVMLLEII-------CCRRSVEMEVEEEGRAILTDW 722
++A E + + DV+S+GV+L EI+ C E+
Sbjct: 201 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL------------- 247
Query: 723 AYDCYAEG-RLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLL 781
Y+ +G RL+ ++ D+ LM W RE P +RP+ +L L +L
Sbjct: 248 -YEKLPQGYRLEKPLNCDDEVYD--------LMRQCW--REKPYERPSFAQILVSLNRML 296
Query: 782 E 782
E
Sbjct: 297 E 297
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 35/289 (12%)
Query: 513 LGRGSFGIVYKGVLKS----ASGKAIAVKKLDRLAQER-EREFKSEVSAIGRTHHKNLVQ 567
LG G+FG VY+G + S +AVK L + E+ E +F E I + +H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRV------RISLEIARGLVYLH 620
+G ++L R ++ E M G L + + P+P + ++ +IA G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 621 EECNVPIIHCDIKPQNILLDNYFS---AKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAP 676
E IH DI +N LL AKI DFG+++ + + R ++ P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 677 EWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLV 736
E F ++K D +SFGV+L EI M + + ++ + GR+D
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGY---MPYPSKSNQEVLEFV---TSGGRMDPPK 269
Query: 737 DSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVPN 785
+ P I C + P RP ++L+ +E + P+
Sbjct: 270 NCPGPVYR----------IMTQCWQHQPEDRPNFAIILERIEYCTQDPD 308
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 118/279 (42%), Gaps = 31/279 (11%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG V+ G + AI K ++ E F E + + H LVQL
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE---SFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 573 DEALNRLLVYEFMGNGTLANLI-----FAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
E +V E+M G+L + + A+ P+ V ++ ++A G+ Y+ E N
Sbjct: 74 SEE-PIYIVTEYMNKGSLLDFLKDGEGRALKLPNL---VDMAAQVAAGMAYI-ERMNY-- 126
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAK 687
IH D++ NIL+ N KI+DFGL++L+ ++ + + APE + K
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 688 VDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAMADRS 747
DV+SFG++L E++ R + R +L D + E
Sbjct: 187 SDVWSFGILLTELVTKGRVPYPGM--NNREVLEQVERGYRMPCPQDCPISLHE------- 237
Query: 748 RLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVPNP 786
LMI W ++DP +RPT + + LE P
Sbjct: 238 -----LMIHCW--KKDPEERPTFEYLQSFLEDYFTATEP 269
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 35/289 (12%)
Query: 513 LGRGSFGIVYKGVLKS----ASGKAIAVKKLDRLAQER-EREFKSEVSAIGRTHHKNLVQ 567
LG G+FG VY+G + S +AVK L + E+ E +F E I + +H+N+V+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRV------RISLEIARGLVYLH 620
+G ++L R ++ E M G L + + P+P + ++ +IA G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 621 EECNVPIIHCDIKPQNILLDNYFS---AKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAP 676
E IH DI +N LL AKI DFG+++ + + R ++ P
Sbjct: 150 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 677 EWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLV 736
E F ++K D +SFGV+L EI M + + ++ + GR+D
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFSLGY---MPYPSKSNQEVLEFV---TSGGRMDPPK 260
Query: 737 DSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVPN 785
+ P I C + P RP ++L+ +E + P+
Sbjct: 261 NCPGPVYR----------IMTQCWQHQPEDRPNFAIILERIEYCTQDPD 299
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 35/289 (12%)
Query: 513 LGRGSFGIVYKGVLKS----ASGKAIAVKKLDRLAQER-EREFKSEVSAIGRTHHKNLVQ 567
LG G+FG VY+G + S +AVK L + E+ E +F E I + +H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRV------RISLEIARGLVYLH 620
+G ++L R ++ E M G L + + P+P + ++ +IA G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 621 EECNVPIIHCDIKPQNILLDNYFS---AKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAP 676
E IH DI +N LL AKI DFG+++ + + R ++ P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 677 EWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLV 736
E F ++K D +SFGV+L EI M + + ++ + GR+D
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGY---MPYPSKSNQEVLEFV---TSGGRMDPPK 269
Query: 737 DSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVPN 785
+ P I C + P RP ++L+ +E + P+
Sbjct: 270 NCPGPVYR----------IMTQCWQHQPEDRPNFAIILERIEYCTQDPD 308
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 513 LGRGSFGIVYKGVLKS----ASGKAIAVKKLDRLAQER-EREFKSEVSAIGRTHHKNLVQ 567
LG G+FG VY+G + S +AVK L + E+ E +F E I + +H+N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRV------RISLEIARGLVYLH 620
+G ++L R ++ E M G L + + P+P + ++ +IA G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 621 EECNVPIIHCDIKPQNILLDNYFS---AKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAP 676
E IH DI +N LL AKI DFG+++ + + R ++ P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 677 EWFKNAPVSAKVDVYSFGVMLLEI 700
E F ++K D +SFGV+L EI
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLD--RLAQEREREFKSEVSAIGRTHHKNLVQLLG 570
+G GS+G K + + + GK + K+LD + + ++ SEV+ + H N+V+
Sbjct: 14 IGTGSYGRCQK-IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR--- 69
Query: 571 FCDEALNR-----LLVYEFMGNGTLANLIFAIPKP------DWNLRVRISLEIARGLVYL 619
+ D ++R +V E+ G LA++I K ++ LRV L +A +
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 620 HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF 679
+ ++H D+KP N+ LD + K+ DFGL+++L D S + GT Y++PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV-GTPYYMSPEQM 188
Query: 680 KNAPVSAKVDVYSFGVMLLEI 700
+ K D++S G +L E+
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 35/289 (12%)
Query: 513 LGRGSFGIVYKGVLKS----ASGKAIAVKKLDRLAQER-EREFKSEVSAIGRTHHKNLVQ 567
LG G+FG VY+G + S +AVK L + E+ E +F E I + +H+N+V+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRV------RISLEIARGLVYLH 620
+G ++L R ++ E M G L + + P+P + ++ +IA G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 621 EECNVPIIHCDIKPQNILLDNYFS---AKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAP 676
E IH DI +N LL AKI DFG+++ + + R ++ P
Sbjct: 199 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 677 EWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLV 736
E F ++K D +SFGV+L EI M + + ++ + GR+D
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFSLGY---MPYPSKSNQEVLEFV---TSGGRMDPPK 309
Query: 737 DSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVPN 785
+ P I C + P RP ++L+ +E + P+
Sbjct: 310 NCPGPVYR----------IMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 9 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 123
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 124 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 35/289 (12%)
Query: 513 LGRGSFGIVYKGVLKS----ASGKAIAVKKLDRLAQER-EREFKSEVSAIGRTHHKNLVQ 567
LG G+FG VY+G + S +AVK L + E+ E +F E I + +H+N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRV------RISLEIARGLVYLH 620
+G ++L R ++ E M G L + + P+P + ++ +IA G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 621 EECNVPIIHCDIKPQNILLDNYFS---AKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAP 676
E IH DI +N LL AKI DFG+++ + + R ++ P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 677 EWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLV 736
E F ++K D +SFGV+L EI M + + ++ + GR+D
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFSLGY---MPYPSKSNQEVLEFV---TSGGRMDPPK 268
Query: 737 DSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVPN 785
+ P I C + P RP ++L+ +E + P+
Sbjct: 269 NCPGPVYR----------IMTQCWQHQPEDRPNFAIILERIEYCTQDPD 307
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 130/293 (44%), Gaps = 42/293 (14%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERE-REFKSEVSA-IGRTHHKNLV 566
LGRG+FG V + G+ K+A+ + +AVK L A E R SE+ I HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 567 QLLGFCDEALNRLLV-YEFMGNGTLANLIFA-----IPKPDW-------NLRVRISLEIA 613
LLG C + L+V EF G L+ + + +P D + S ++A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 614 RGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM-IRGTRG 672
+G+ +L + IH D+ +NILL KI DFGL++ + D R
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 673 YVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVE--MEVEEEGRAILTDWAYDCYAEG 730
++APE + + + DV+SFGV+L EI S ++++EE L EG
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK--------EG 263
Query: 731 RLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEV 783
D P M + C +PS+RPT +++ L LL+
Sbjct: 264 TRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 307
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 12 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 568 LLGFCDEALNRLLVYEFMG----NGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ + A+ + IP P L ++ +GL + H
Sbjct: 70 LLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 126
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 127 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 9 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 123
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 124 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 35/289 (12%)
Query: 513 LGRGSFGIVYKGVLKS----ASGKAIAVKKLDRLAQER-EREFKSEVSAIGRTHHKNLVQ 567
LG G+FG VY+G + S +AVK L + E+ E +F E I + +H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRV------RISLEIARGLVYLH 620
+G ++L R ++ E M G L + + P+P + ++ +IA G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 621 EECNVPIIHCDIKPQNILLDNYFS---AKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAP 676
E IH DI +N LL AKI DFG+++ + + R ++ P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 677 EWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLV 736
E F ++K D +SFGV+L EI M + + ++ + GR+D
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGY---MPYPSKSNQEVLEFV---TSGGRMDPPK 269
Query: 737 DSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVPN 785
+ P I C + P RP ++L+ +E + P+
Sbjct: 270 NCPGPVYR----------IMTQCWQHQPEDRPNFAIILERIEYCTQDPD 308
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 11 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 69 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 125
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 126 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 9 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 123
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 124 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 35/289 (12%)
Query: 513 LGRGSFGIVYKGVLKS----ASGKAIAVKKLDRLAQER-EREFKSEVSAIGRTHHKNLVQ 567
LG G+FG VY+G + S +AVK L + E+ E +F E I + +H+N+V+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRV------RISLEIARGLVYLH 620
+G ++L R ++ E M G L + + P+P + ++ +IA G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 621 EECNVPIIHCDIKPQNILLDNYFS---AKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAP 676
E IH DI +N LL AKI DFG+++ + + R ++ P
Sbjct: 165 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 677 EWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLV 736
E F ++K D +SFGV+L EI M + + ++ + GR+D
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFSLGY---MPYPSKSNQEVLEFV---TSGGRMDPPK 275
Query: 737 DSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVPN 785
+ P I C + P RP ++L+ +E + P+
Sbjct: 276 NCPGPVYR----------IMTQCWQHQPEDRPNFAIILERIEYCTQDPD 314
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 12 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 70 LLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 126
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 127 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
++G GS GIV K SG+ +AVK +D Q+R +EV + H N+V++
Sbjct: 52 KIGEGSTGIVCLAREKH-SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 572 CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCD 631
++ EF+ G L +++ + + + + + + L YLH + +IH D
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIVSQVRLNEEQI-ATVCEAVLQALAYLHAQG---VIHRD 166
Query: 632 IKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVY 691
IK +ILL K+SDFG + D + ++ GT ++APE + + +VD++
Sbjct: 167 IKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV-GTPYWMAPEVISRSLYATEVDIW 225
Query: 692 SFGVMLLEII 701
S G+M++E++
Sbjct: 226 SLGIMVIEMV 235
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 35/289 (12%)
Query: 513 LGRGSFGIVYKGVLKS----ASGKAIAVKKLDRLAQER-EREFKSEVSAIGRTHHKNLVQ 567
LG G+FG VY+G + S +AVK L + E+ E +F E I + +H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRV------RISLEIARGLVYLH 620
+G ++L R ++ E M G L + + P+P + ++ +IA G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 621 EECNVPIIHCDIKPQNILLDNYFS---AKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAP 676
E IH DI +N LL AKI DFG+++ + + R ++ P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 677 EWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLV 736
E F ++K D +SFGV+L EI M + + ++ + GR+D
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGY---MPYPSKSNQEVLEFV---TSGGRMDPPK 283
Query: 737 DSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVPN 785
+ P I C + P RP ++L+ +E + P+
Sbjct: 284 NCPGPVYR----------IMTQCWQHQPEDRPNFAIILERIEYCTQDPD 322
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 8 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 66 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 122
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 123 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE---REFKSEVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+ K+ RL E E E+S + +H N+V+
Sbjct: 9 EKIGEGTYGVVYKARNK-LTGEVVALXKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 123
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+T T Y APE
Sbjct: 124 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE---REFKSEVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+ K+ RL E E E+S + +H N+V+
Sbjct: 8 EKIGEGTYGVVYKARNK-LTGEVVALXKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 66 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 122
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+T T Y APE
Sbjct: 123 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 12 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 70 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 126
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 127 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 10 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 68 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 124
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 125 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 11 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 568 LLGFCDEALNRLLVYEFMG----NGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ + A+ + IP P L ++ +GL + H
Sbjct: 69 LLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 125
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 126 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 9 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 123
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 124 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 12 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 70 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 126
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 127 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 11 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 69 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 125
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 126 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 8 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 66 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 122
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 123 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 10 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 68 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 124
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 125 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 35/289 (12%)
Query: 513 LGRGSFGIVYKGVLKS----ASGKAIAVKKLDRLAQER-EREFKSEVSAIGRTHHKNLVQ 567
LG G+FG VY+G + S +AVK L + E+ E +F E I + +H+N+V+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRV------RISLEIARGLVYLH 620
+G ++L R ++ E M G L + + P+P + ++ +IA G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 621 EECNVPIIHCDIKPQNILLDNYFS---AKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAP 676
E IH DI +N LL AKI DFG+++ + + R ++ P
Sbjct: 176 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 677 EWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLV 736
E F ++K D +SFGV+L EI M + + ++ + GR+D
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFSLGY---MPYPSKSNQEVLEFV---TSGGRMDPPK 286
Query: 737 DSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVPN 785
+ P I C + P RP ++L+ +E + P+
Sbjct: 287 NCPGPVYR----------IMTQCWQHQPEDRPNFAIILERIEYCTQDPD 325
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 513 LGRGSFGIVYKGVLKS----ASGKAIAVKKLDRLAQER-EREFKSEVSAIGRTHHKNLVQ 567
LG G+FG VY+G + S +AVK L + E+ E +F E I + +H+N+V+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRV------RISLEIARGLVYLH 620
+G ++L R ++ E M G L + + P+P + ++ +IA G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 621 EECNVPIIHCDIKPQNILLDNYFS---AKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAP 676
E IH DI +N LL AKI DFG+++ + + R ++ P
Sbjct: 175 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 677 EWFKNAPVSAKVDVYSFGVMLLEI 700
E F ++K D +SFGV+L EI
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEI 255
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 13 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 70
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 71 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 127
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 128 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 183
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 132/278 (47%), Gaps = 19/278 (6%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERER-EFKSEVSAIGR 559
ELK+ ELG G+ G+V+K V SG +A K + + R + E+ +
Sbjct: 2 ELKDDDFEKISELGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 560 THHKNLVQLLG--FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLV 617
+ +V G + D ++ + E M G+L ++ + + ++S+ + +GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEIS--ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 618 YLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 677
YL E+ I+H D+KP NIL+++ K+ DFG+S L+ + + GTR Y++PE
Sbjct: 119 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPE 173
Query: 678 WFKNAPVSAKVDVYSFGVMLLEIICCRRSV-EMEVEEEGRAILTDWAYDCYAEGRLDVLV 736
+ S + D++S G+ L+E+ R + + +E+ R + + LD +V
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFEL-------LDYIV 226
Query: 737 DSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVL 774
+ P + ++ C+ ++P++R +K ++
Sbjct: 227 NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 264
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 126/293 (43%), Gaps = 43/293 (14%)
Query: 509 FKEELGRGSFGIVYKG----VLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKN 564
K ELG G+FG V+ + +AVK L + ++F E + H++
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNL--------------RVRISL 610
+V+ G C E ++V+E+M +G L + A PD L + I+
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRA-HGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 611 EIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRT--HTMI 667
+IA G+VYL + +H D+ +N L+ KI DFG+S+ + S D R HTM+
Sbjct: 136 QIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML 192
Query: 668 RGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCY 727
++ PE + + DV+S GV+L EI + ++ + +C
Sbjct: 193 --PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS-------NNEVIECI 243
Query: 728 AEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGL 780
+GR+ R+ Q+ + + C + +P R +K + +L+ L
Sbjct: 244 TQGRV---------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 19/198 (9%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKL-DRLAQEREREFKSEVSAIGRTHHKNLVQLL 569
E++GRG+FG V+ G L+ A +AVK + L + + +F E + + H N+V+L+
Sbjct: 120 EQIGRGNFGEVFSGRLR-ADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEI----ARGLVYLHEECNV 625
G C + +V E + G + + + LRV+ L++ A G+ YL +C
Sbjct: 179 GVCTQKQPIYIVMELVQGG---DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC-- 233
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR----GYVAPEWFKN 681
IH D+ +N L+ KISDFG+S+ + + G R + APE
Sbjct: 234 -CIHRDLAARNCLVTEKNVLKISDFGMSR---EEADGVYAASGGLRQVPVKWTAPEALNY 289
Query: 682 APVSAKVDVYSFGVMLLE 699
S++ DV+SFG++L E
Sbjct: 290 GRYSSESDVWSFGILLWE 307
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 7/205 (3%)
Query: 513 LGRGSFGIVYKGVLKSASG-KAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQLLG 570
LG+GSFG V K AI + K D + Q+ + E E + + L
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLH 86
Query: 571 FCDEALNRL-LVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
C + ++RL V E++ G L I + K V + EI+ GL +LH+ II+
Sbjct: 87 SCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRG---IIY 143
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
D+K N++LD+ KI+DFG+ K + D T GT Y+APE P VD
Sbjct: 144 RDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFC-GTPDYIAPEIIAYQPYGKSVD 202
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEE 714
+++GV+L E++ + + E E+E
Sbjct: 203 WWAYGVLLYEMLAGQPPFDGEDEDE 227
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 129/280 (46%), Gaps = 40/280 (14%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDR-LAQEREREFKSEVSAIGRTHHKNLVQ 567
FK +LG G+FG V+ V + +SG +K +++ +Q + ++E+ + H N+++
Sbjct: 26 FKRKLGSGAFGDVHL-VEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIK 84
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR----VRISLEIARGLVYLHEEC 623
+ ++ N +V E G L I + L + ++ L Y H +
Sbjct: 85 IFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ- 143
Query: 624 NVPIIHCDIKPQNILLDN---YFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
++H D+KP+NIL + + KI DFGL++L SD+ T+ GT Y+APE FK
Sbjct: 144 --HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAA--GTALYMAPEVFK 199
Query: 681 NAPVSAKVDVYSFGVMLLEIIC-----CRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVL 735
V+ K D++S GV++ ++ S+E EV+++ ++A +C
Sbjct: 200 R-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE-EVQQKATYKEPNYAVEC--------- 248
Query: 736 VDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
P L K ++ +DP +RP+ VL
Sbjct: 249 ----RPLTPQAVDLLKQMLT------KDPERRPSAAQVLH 278
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 513 LGRGSFGIVYKGVLKS----ASGKAIAVKKLDRLAQER-EREFKSEVSAIGRTHHKNLVQ 567
LG G+FG VY+G + S +AVK L + E+ E +F E I + +H+N+V+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAI-PKPDWNLRV------RISLEIARGLVYLH 620
+G ++L R ++ E M G L + + P+P + ++ +IA G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 621 EECNVPIIHCDIKPQNILLDNYFS---AKISDFGLSK-LLLSDQSRTHTMIRGTRGYVAP 676
E IH DI +N LL AKI DFG+++ + + R ++ P
Sbjct: 185 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 677 EWFKNAPVSAKVDVYSFGVMLLEI 700
E F ++K D +SFGV+L EI
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEI 265
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLD--RLAQEREREFKSEVSAIGRTHHKNLVQLLG 570
+G GS+G K + + + GK + K+LD + + ++ SEV+ + H N+V+
Sbjct: 14 IGTGSYGRCQK-IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR--- 69
Query: 571 FCDEALNR-----LLVYEFMGNGTLANLIFAIPKP------DWNLRVRISLEIARGLVYL 619
+ D ++R +V E+ G LA++I K ++ LRV L +A +
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 620 HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF 679
+ ++H D+KP N+ LD + K+ DFGL+++L D+ + GT Y++PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYMSPEQM 188
Query: 680 KNAPVSAKVDVYSFGVMLLEI 700
+ K D++S G +L E+
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 41/275 (14%)
Query: 484 VQDSSTSETNL------------------RFFSYNELKEATGGFKE-------ELGRGSF 518
V +S++ETNL R ++ K+ G K+ ELG G+
Sbjct: 22 VNGTSSAETNLEALQKKLLELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNG 81
Query: 519 GIVYKGVLKSASGKAIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLVQLLG--FCDEA 575
G+V+K V SG +A K + + R + E+ + + +V G + D
Sbjct: 82 GVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE 140
Query: 576 LNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQ 635
++ + E M G+L ++ + + ++S+ + +GL YL E+ I+H D+KP
Sbjct: 141 IS--ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPS 196
Query: 636 NILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGV 695
NIL+++ K+ DFG+S L+ + + GTR Y++PE + S + D++S G+
Sbjct: 197 NILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQSDIWSMGL 253
Query: 696 MLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEG 730
L+E+ R + +E + + C EG
Sbjct: 254 SLVEMAVGRYPIPPPDAKE-----LELMFGCQVEG 283
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 103/191 (53%), Gaps = 8/191 (4%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLG 570
E+LG GS+G VYK + K +G+ +A+K++ + +E E+S + + ++V+ G
Sbjct: 35 EKLGEGSYGSVYKAIHKE-TGQIVAIKQVP--VESDLQEIIKEISIMQQCDSPHVVKYYG 91
Query: 571 FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLE-IARGLVYLHEECNVPIIH 629
+ + +V E+ G G+++++I K + L+ +GL YLH + IH
Sbjct: 92 SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIH 148
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIK NILL+ AK++DFG++ L ++ + +I GT ++APE + + D
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI-GTPFWMAPEVIQEIGYNCVAD 207
Query: 690 VYSFGVMLLEI 700
++S G+ +E+
Sbjct: 208 IWSLGITAIEM 218
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 138/304 (45%), Gaps = 56/304 (18%)
Query: 509 FKEELGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRT-HH 562
F + LG G+FG V + G+ K + +AVK L A E+E SE+ + H
Sbjct: 35 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 94
Query: 563 KNLVQLLGFCDEALNRLLVYEFMGNGTLANLIF------------------AIPKPD--- 601
+N+V LLG C L++ E+ G L N + + K D
Sbjct: 95 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 602 WNLR--VRISLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS 658
LR + S ++A+G+ +L + C IH D+ +N+LL N AKI DFGL++ +++
Sbjct: 155 LELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMN 210
Query: 659 DQSRTHTMIRGTR----GYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEE 714
D ++ +++G ++APE + + + DV+S+G++L EI + +
Sbjct: 211 D---SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF------SLGLNPY 261
Query: 715 GRAILTDWAYDCYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVL 774
++ Y +G +PA A ++ +M A W + +P+ RPT + +
Sbjct: 262 PGILVNSKFYKLVKDG-----YQMAQPAFAPKNIYS--IMQACWAL--EPTHRPTFQQIC 312
Query: 775 QMLE 778
L+
Sbjct: 313 SFLQ 316
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 512 ELGRGSFGIVYKGVLKSASGKA-IAVKKLDRLAQERE-REFKSEVSAIGRTHHKNLVQLL 569
ELG G+FG V +GV + + +A+K L + ++ + E E + + + +V+L+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 570 GFCD-EALNRLLVYEFMGNGTLANLIFAIPK--PDWNLRVRISLEIARGLVYLHEECNVP 626
G C EAL +LV E G G L + + P N+ + +++ G+ YL E+
Sbjct: 77 GVCQAEAL--MLVMEMAGGGPLHKFLVGKREEIPVSNV-AELLHQVSMGMKYLEEK---N 130
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGT--RGYVAPEWFKNAPV 684
+H D+ +N+LL N AKISDFGLSK L +D S G + APE
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 685 SAKVDVYSFGVMLLEII 701
S++ DV+S+GV + E +
Sbjct: 191 SSRSDVWSYGVTMWEAL 207
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRL---AQEREREFKSEVSAIGRTHHKNLVQ 567
+ LG G+FG V G +G +AVK L+R + + + K E+ + H ++++
Sbjct: 17 DTLGVGTFGKVKIGE-HQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
L + +V E++ G L + I + + R+ +I + Y H +
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM---V 132
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSA- 686
+H D+KP+N+LLD + +AKI+DFGLS ++SD T G+ Y APE +
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSN-MMSDGEFLRTSC-GSPNYAAPEVISGRLYAGP 190
Query: 687 KVDVYSFGVMLLEIIC 702
+VD++S GV+L ++C
Sbjct: 191 EVDIWSCGVILYALLC 206
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 8 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+E + A+ + IP P L ++ +GL + H
Sbjct: 66 LLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 122
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+T T Y APE
Sbjct: 123 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 41/222 (18%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLG 570
E +G G FG V+K + GK ++++ ++ ERE V A+ + H N+V G
Sbjct: 18 ELIGSGGFGQVFKAKHR-IDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIVHYNG 72
Query: 571 ----------FCDEALNR-------------------LLVYEFMGNGTLANLIFAI--PK 599
D++L + EF GTL I K
Sbjct: 73 CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 132
Query: 600 PDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSD 659
D L + + +I +G+ Y+H + +IH D+KP NI L + KI DFGL L +D
Sbjct: 133 LDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 189
Query: 660 QSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEII 701
RT + +GT Y++PE + +VD+Y+ G++L E++
Sbjct: 190 GKRTRS--KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 12/193 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS----EVSAIGRTHHKNLVQL 568
+G GS+G+V K K +G+ +A+KK L + ++ K E+ + + H+NLV L
Sbjct: 33 VGEGSYGMVMKCRNKD-TGRIVAIKKF--LESDDDKMVKKIAMREIKLLKQLRHENLVNL 89
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
L C + LV+EF+ + L +L D+ + + +I G+ + H II
Sbjct: 90 LEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NII 146
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF-KNAPVSAK 687
H DIKP+NIL+ K+ DFG ++ L + + TR Y APE +
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV-ATRWYRAPELLVGDVKYGKA 205
Query: 688 VDVYSFGVMLLEI 700
VDV++ G ++ E+
Sbjct: 206 VDVWAIGCLVTEM 218
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 510 KEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLL 569
+ ELGRG+ IVY+ K + K A+K L + ++ ++E+ + R H N+++L
Sbjct: 58 ESELGRGATSIVYRCKQK-GTQKPYALKVLKKTVDKKI--VRTEIGVLLRLSHPNIIKLK 114
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR--VRISLEIARGLVYLHEECNVPI 627
+ LV E + G L + I + K ++ R +I + YLHE I
Sbjct: 115 EIFETPTEISLVLELVTGGELFDRI--VEKGYYSERDAADAVKQILEAVAYLHENG---I 169
Query: 628 IHCDIKPQNILLDNYFS---AKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
+H D+KP+N+L KI+DFGLSK++ + + GT GY APE +
Sbjct: 170 VHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQVLMKTVCGTPGYCAPEILRGCAY 227
Query: 685 SAKVDVYSFGVMLLEIIC 702
+VD++S G++ ++C
Sbjct: 228 GPEVDMWSVGIITYILLC 245
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 7/205 (3%)
Query: 513 LGRGSFGIVYKGVLKSASG-KAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLVQLLG 570
LG+GSFG V K A+ + K D + Q+ + E E + + L
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 571 FCDEALNRL-LVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
C + ++RL V E++ G L I + + V + EIA GL +L + II+
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIY 465
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
D+K N++LD+ KI+DFG+ K + D T GT Y+APE P VD
Sbjct: 466 RDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC-GTPDYIAPEIIAYQPYGKSVD 524
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEE 714
++FGV+L E++ + E E E+E
Sbjct: 525 WWAFGVLLYEMLAGQAPFEGEDEDE 549
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 130/298 (43%), Gaps = 50/298 (16%)
Query: 509 FKEELGRGSFGIVYKG----VLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKN 564
K ELG G+FG V+ + + +AVK L ++F+ E + H++
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRV-----------------R 607
+V+ G C + ++V+E+M +G L + A PD + V
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRA-HGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 608 ISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRT--H 664
I+ +IA G+VYL + +H D+ +N L+ KI DFG+S+ + S D R H
Sbjct: 138 IASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH 194
Query: 665 TMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY 724
TM+ ++ PE + + DV+SFGV+L EI + ++
Sbjct: 195 TML--PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-------VI 245
Query: 725 DCYAEGRLDVLVDSDEPAMADRSRL--QKWLMIAMWCIREDPSKRPTMKVVLQMLEGL 780
+C +GR+ +R R+ ++ + + C + +P +R +K + ++L L
Sbjct: 246 ECITQGRV-----------LERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHAL 292
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 11/196 (5%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR--LAQ-EREREFKSEVSAIGRTHHKNLVQLL 569
LG GSFG V K + +G+ +A+K +++ LA+ + + + E+S + H ++++L
Sbjct: 22 LGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 80
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
++V E+ GN L + I K R +I + Y H I+H
Sbjct: 81 DVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVH 136
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSA-KV 688
D+KP+N+LLD + + KI+DFGLS +++D + T G+ Y APE + +V
Sbjct: 137 RDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSC-GSPNYAAPEVISGKLYAGPEV 194
Query: 689 DVYSFGVMLLEIICCR 704
DV+S GV+L ++C R
Sbjct: 195 DVWSCGVILYVMLCRR 210
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 11/196 (5%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR--LAQ-EREREFKSEVSAIGRTHHKNLVQLL 569
LG GSFG V K + +G+ +A+K +++ LA+ + + + E+S + H ++++L
Sbjct: 12 LGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 70
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
++V E+ GN L + I K R +I + Y H I+H
Sbjct: 71 DVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVH 126
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSA-KV 688
D+KP+N+LLD + + KI+DFGLS +++D + T G+ Y APE + +V
Sbjct: 127 RDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSC-GSPNYAAPEVISGKLYAGPEV 184
Query: 689 DVYSFGVMLLEIICCR 704
DV+S GV+L ++C R
Sbjct: 185 DVWSCGVILYVMLCRR 200
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 9 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 123
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KP+N+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 124 ---VLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 11/196 (5%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR--LAQ-EREREFKSEVSAIGRTHHKNLVQLL 569
LG GSFG V K + +G+ +A+K +++ LA+ + + + E+S + H ++++L
Sbjct: 21 LGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 79
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
++V E+ GN L + I K R +I + Y H I+H
Sbjct: 80 DVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVH 135
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSA-KV 688
D+KP+N+LLD + + KI+DFGLS +++D + T G+ Y APE + +V
Sbjct: 136 RDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSC-GSPNYAAPEVISGKLYAGPEV 193
Query: 689 DVYSFGVMLLEIICCR 704
DV+S GV+L ++C R
Sbjct: 194 DVWSCGVILYVMLCRR 209
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 131/296 (44%), Gaps = 45/296 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERE-REFKSEVSA-IGRTHHKNLV 566
LGRG+FG V + G+ K+A+ + +AVK L A E R SE+ I HH N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 567 QLLGFCDEALNRLLV-YEFMGNGTLANLI---------FAIPKPDWNLRVRI------SL 610
LLG C + L+V EF G L+ + + P+ + + + S
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 611 EIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM-IRG 669
++A+G+ +L + IH D+ +NILL KI DFGL++ + D R
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 670 TRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVE--MEVEEEGRAILTDWAYDCY 727
++APE + + + DV+SFGV+L EI S ++++EE L
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK------- 265
Query: 728 AEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEV 783
EG D P M + C +PS+RPT +++ L LL+
Sbjct: 266 -EGTRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
+LG+G FG V+ G + AI K ++ E F E + + H+ LVQL
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQLYAV 78
Query: 572 CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNL--RVRISLEIARGLVYLHEECNVPIIH 629
E +V E+M G+L + + L V +S +IA G+ Y+ + +H
Sbjct: 79 VSEE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVH 134
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
D++ NIL+ K++DFGL++L+ ++ + + APE + K D
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 690 VYSFGVMLLEI 700
V+SFG++L E+
Sbjct: 195 VWSFGILLTEL 205
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 11 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 69 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 125
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KP+N+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 126 ---VLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 10 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 68 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 124
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KP+N+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 125 ---VLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 17/196 (8%)
Query: 510 KEELGRGSFGIVYKGVLKSA----SGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKN 564
KEELG+G+F +V + V K+ + K I KKL R Q+ ERE + + H N
Sbjct: 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR----ICRKLQHPN 89
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
+V+L E LV++ + G L I A +I + Y H
Sbjct: 90 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG- 148
Query: 625 VPIIHCDIKPQNILLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
I+H ++KP+N+LL + + K++DFGL+ + ++D H GT GY++PE K
Sbjct: 149 --IVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFA-GTPGYLSPEVLKK 204
Query: 682 APVSAKVDVYSFGVML 697
P S VD+++ GV+L
Sbjct: 205 DPYSKPVDIWACGVIL 220
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 13/195 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKL-DRLAQEREREFKSEVSAIGRTHHKNLVQLL 569
E++GRG+FG V+ G L+ A +AVK + L + + +F E + + H N+V+L+
Sbjct: 120 EQIGRGNFGEVFSGRLR-ADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEI----ARGLVYLHEECNV 625
G C + +V E + G + + + LRV+ L++ A G+ YL +C
Sbjct: 179 GVCTQKQPIYIVMELVQGG---DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC-- 233
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGT-RGYVAPEWFKNAPV 684
IH D+ +N L+ KISDFG+S+ +R + APE
Sbjct: 234 -CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRY 292
Query: 685 SAKVDVYSFGVMLLE 699
S++ DV+SFG++L E
Sbjct: 293 SSESDVWSFGILLWE 307
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 11/196 (5%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR--LAQ-EREREFKSEVSAIGRTHHKNLVQLL 569
LG GSFG V K + +G+ +A+K +++ LA+ + + + E+S + H ++++L
Sbjct: 16 LGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 74
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
++V E+ GN L + I K R +I + Y H I+H
Sbjct: 75 DVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVH 130
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSA-KV 688
D+KP+N+LLD + + KI+DFGLS +++D + T G+ Y APE + +V
Sbjct: 131 RDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSC-GSPNYAAPEVISGKLYAGPEV 188
Query: 689 DVYSFGVMLLEIICCR 704
DV+S GV+L ++C R
Sbjct: 189 DVWSCGVILYVMLCRR 204
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 17/196 (8%)
Query: 510 KEELGRGSFGIVYKGVLKSA----SGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKN 564
KEELG+G+F +V + V K+ + K I KKL R Q+ ERE + + H N
Sbjct: 10 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR----ICRKLQHPN 65
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
+V+L E LV++ + G L I A +I + Y H
Sbjct: 66 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN-- 123
Query: 625 VPIIHCDIKPQNILLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
I+H ++KP+N+LL + + K++DFGL+ + ++D H GT GY++PE K
Sbjct: 124 -GIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFA-GTPGYLSPEVLKK 180
Query: 682 APVSAKVDVYSFGVML 697
P S VD+++ GV+L
Sbjct: 181 DPYSKPVDIWACGVIL 196
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 8/197 (4%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDR--LAQEREREFKSEVSAIGRTHHKNLV 566
E +G G F V K +G+ +A+K +D+ L + R K+E+ A+ H+++
Sbjct: 14 LHETIGTGGFAKV-KLACHILTGEMVAIKIMDKNTLGSDLPR-IKTEIEALKNLRHQHIC 71
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
QL + A +V E+ G L + I + + + +I + Y+H +
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYA- 130
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK-NAPVS 685
H D+KP+N+L D Y K+ DFGL ++ G+ Y APE + + +
Sbjct: 131 --HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLG 188
Query: 686 AKVDVYSFGVMLLEIIC 702
++ DV+S G++L ++C
Sbjct: 189 SEADVWSMGILLYVLMC 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 17/196 (8%)
Query: 510 KEELGRGSFGIVYKGVLKSA----SGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKN 564
KEELG+G+F +V + V K+ + K I KKL R Q+ ERE + + H N
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR----ICRKLQHPN 66
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
+V+L E LV++ + G L I A +I + Y H
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN-- 124
Query: 625 VPIIHCDIKPQNILLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
I+H ++KP+N+LL + + K++DFGL+ + ++D H GT GY++PE K
Sbjct: 125 -GIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFA-GTPGYLSPEVLKK 181
Query: 682 APVSAKVDVYSFGVML 697
P S VD+++ GV+L
Sbjct: 182 DPYSKPVDIWACGVIL 197
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 12 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 70 LLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 126
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KP+N+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 127 ---VLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
+LG+G FG V+ G + AI K ++ E F E + + H+ LVQL
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQLYAV 78
Query: 572 CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNL--RVRISLEIARGLVYLHEECNVPIIH 629
E +V E+M G+L + + L V +S +IA G+ Y+ + +H
Sbjct: 79 VSEE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVH 134
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
D++ NIL+ K++DFGL++L+ ++ + + APE + K D
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 690 VYSFGVMLLEI 700
V+SFG++L E+
Sbjct: 195 VWSFGILLTEL 205
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 9/196 (4%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
+LG+G FG V+ G + AI K ++ E F E + + H+ LVQL
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQLYAV 330
Query: 572 CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR--VRISLEIARGLVYLHEECNVPIIH 629
E +V E+M G+L + + L V ++ +IA G+ Y+ E N +H
Sbjct: 331 VSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVH 386
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
D++ NIL+ K++DFGL++L+ ++ + + APE + K D
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 446
Query: 690 VYSFGVMLLEIICCRR 705
V+SFG++L E+ R
Sbjct: 447 VWSFGILLTELTTKGR 462
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 17/196 (8%)
Query: 510 KEELGRGSFGIVYKGVLKSA----SGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKN 564
KEELG+G+F +V + V K+ + K I KKL R Q+ ERE + + H N
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR----ICRKLQHPN 66
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
+V+L E LV++ + G L I A +I + Y H
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG- 125
Query: 625 VPIIHCDIKPQNILLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
I+H ++KP+N+LL + + K++DFGL+ + ++D H GT GY++PE K
Sbjct: 126 --IVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFA-GTPGYLSPEVLKK 181
Query: 682 APVSAKVDVYSFGVML 697
P S VD+++ GV+L
Sbjct: 182 DPYSKPVDIWACGVIL 197
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
+LG+G FG V+ G + AI K ++ E F E + + H+ LVQL
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQLYAV 71
Query: 572 CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNL--RVRISLEIARGLVYLHEECNVPIIH 629
E +V E+M G+L + + L V ++ +IA G+ Y+ + +H
Sbjct: 72 VSEE-PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 127
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
D++ NIL+ K++DFGL++L+ ++ + + APE + K D
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 690 VYSFGVMLLEI 700
V+SFG++L E+
Sbjct: 188 VWSFGILLTEL 198
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 10 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+EF+ A+ + IP P L ++ +GL + H
Sbjct: 68 LLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 124
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KP+N+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 125 ---VLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
+LG+G FG V+ G + AI K ++ E F E + + H+ LVQL
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQLYAV 247
Query: 572 CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNL--RVRISLEIARGLVYLHEECNVPIIH 629
E +V E+M G+L + + L V ++ +IA G+ Y+ + +H
Sbjct: 248 VSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 303
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
D++ NIL+ K++DFGL++L+ ++ + + APE + K D
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 690 VYSFGVMLLEI 700
V+SFG++L E+
Sbjct: 364 VWSFGILLTEL 374
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 11/217 (5%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLVQLLG 570
ELG G+ G+V K V SG +A K + + R + E+ + + +V G
Sbjct: 23 ELGAGNGGVVTK-VQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 81
Query: 571 --FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+ D ++ + E M G+L ++ + + ++S+ + RGL YL E+ I+
Sbjct: 82 AFYSDGEIS--ICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQ--IM 137
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
H D+KP NIL+++ K+ DFG+S L+ + + GTR Y+APE + S +
Sbjct: 138 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMAPERLQGTHYSVQS 194
Query: 689 DVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYD 725
D++S G+ L+E+ R + +E AI D
Sbjct: 195 DIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVD 231
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 7/205 (3%)
Query: 513 LGRGSFGIVYKGVLKSASG-KAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQLLG 570
LG+GSFG V K A+ + K D + Q+ + E E + + L
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 571 FCDEALNRL-LVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
C + ++RL V E++ G L I + + V + EIA GL +L + II+
Sbjct: 88 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIY 144
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
D+K N++LD+ KI+DFG+ K + D T GT Y+APE P VD
Sbjct: 145 RDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC-GTPDYIAPEIIAYQPYGKSVD 203
Query: 690 VYSFGVMLLEIICCRRSVEMEVEEE 714
++FGV+L E++ + E E E+E
Sbjct: 204 WWAFGVLLYEMLAGQAPFEGEDEDE 228
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
+LG+G FG V+ G + AI K ++ E F E + + H+ LVQL
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQLYAV 247
Query: 572 CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNL--RVRISLEIARGLVYLHEECNVPIIH 629
E +V E+M G+L + + L V ++ +IA G+ Y+ + +H
Sbjct: 248 VSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 303
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
D++ NIL+ K++DFGL++L+ ++ + + APE + K D
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 690 VYSFGVMLLEI 700
V+SFG++L E+
Sbjct: 364 VWSFGILLTEL 374
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVK----KLDRLAQ-EREREFKSEVSAIGRTHHKNL 565
E+LG GSFG+V +G + SGK ++V K D L+Q E +F EV+A+ H+NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRV----RISLEIARGLVYLHE 621
++L G + +V E L +L+ + K + + R ++++A G+ YL
Sbjct: 78 IRLYGVVLTPPMK-MVTEL---APLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 133
Query: 622 ECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR----GYVAPE 677
+ IH D+ +N+LL KI DFGL + L Q+ H +++ R + APE
Sbjct: 134 K---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL--PQNDDHYVMQEHRKVPFAWCAPE 188
Query: 678 WFKNAPVSAKVDVYSFGVMLLEI 700
K S D + FGV L E+
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEM 211
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQ 567
F E+GRGSF VYKG+ + + + DR + ER+ FK E + H N+V+
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVR 89
Query: 568 LLGFCDEALNR----LLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+ + +LV E +GTL + + +I +GL +LH
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTR- 148
Query: 624 NVPIIHCDIKPQNILLDN-YFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNA 682
PIIH D+K NI + S KI D GL+ L + ++ + GT + APE ++
Sbjct: 149 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA---VIGTPEFXAPEXYEEK 205
Query: 683 PVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY-DCYAEGRLDVLVDSD-E 740
VDVY+FG LE +++ Y +C ++ V S +
Sbjct: 206 -YDESVDVYAFGXCXLE-----------------XATSEYPYSECQNAAQIYRRVTSGVK 247
Query: 741 PAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVL 774
PA D+ + + I CIR++ +R ++K +L
Sbjct: 248 PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 281
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 19/196 (9%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
+LG+G FG V+ G + AI K ++ E F E + + H+ LVQL
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQLYAV 81
Query: 572 CDEALNRLLVYEFMGNGTLANLI-------FAIPKPDWNLRVRISLEIARGLVYLHEECN 624
E +V E+M G+L + + +P+ V ++ +IA G+ Y+ E N
Sbjct: 82 VSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQ-----LVDMAAQIASGMAYV-ERMN 134
Query: 625 VPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
+H D++ NIL+ K++DFGL++L+ ++ + + APE
Sbjct: 135 Y--VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF 192
Query: 685 SAKVDVYSFGVMLLEI 700
+ K DV+SFG++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 105/201 (52%), Gaps = 22/201 (10%)
Query: 513 LGRGSFGIVY--KGVLKSASGKAIAVKKL--------DRLAQEREREFKSEVSAIGRTHH 562
LG+GSFG V+ + V + SG A+K L DR+ + ER+ ++V+ H
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN------H 89
Query: 563 KNLVQLLGFCDEALNRLLVYEFMGNGTL-ANLIFAIPKPDWNLRVRISLEIARGLVYLHE 621
+V+L L+ +F+ G L L + + +++ ++ E+A GL +LH
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALGLDHLH- 147
Query: 622 ECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
++ II+ D+KP+NILLD K++DFGLSK + + + ++ GT Y+APE
Sbjct: 148 --SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC-GTVEYMAPEVVNR 204
Query: 682 APVSAKVDVYSFGVMLLEIIC 702
S D +S+GV++ E++
Sbjct: 205 QGHSHSADWWSYGVLMFEMLT 225
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVK----KLDRLAQ-EREREFKSEVSAIGRTHHKNL 565
E+LG GSFG+V +G + SGK ++V K D L+Q E +F EV+A+ H+NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRV----RISLEIARGLVYLHE 621
++L G + +V E L +L+ + K + + R ++++A G+ YL
Sbjct: 84 IRLYGVVLTPPMK-MVTEL---APLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 139
Query: 622 ECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR----GYVAPE 677
+ IH D+ +N+LL KI DFGL + L Q+ H +++ R + APE
Sbjct: 140 K---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL--PQNDDHXVMQEHRKVPFAWCAPE 194
Query: 678 WFKNAPVSAKVDVYSFGVMLLEI 700
K S D + FGV L E+
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEM 217
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
+LG+G FG V+ G + AI K ++ E F E + + H+ LVQL
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQLYAV 74
Query: 572 CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNL--RVRISLEIARGLVYLHEECNVPIIH 629
E +V E+M G+L + + L V ++ +IA G+ Y+ + +H
Sbjct: 75 VSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 130
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
D++ NIL+ K++DFGL++L+ ++ + + APE + K D
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 190
Query: 690 VYSFGVMLLEI 700
V+SFG++L E+
Sbjct: 191 VWSFGILLTEL 201
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLVQLLG 570
ELG G+ G+V+K V SG +A K + + R + E+ + + +V G
Sbjct: 13 ELGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 571 --FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+ D ++ + E M G+L ++ + + ++S+ + +GL YL E+ I+
Sbjct: 72 AFYSDGEIS--ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 127
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
H D+KP NIL+++ K+ DFG+S L+ + + GTR Y++PE + S +
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQS 184
Query: 689 DVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEG 730
D++S G+ L+E+ R + +E + + C EG
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKE-----LELMFGCQVEG 221
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 19/223 (8%)
Query: 487 SSTSETNLRFFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKLDRLA 543
++ ++ LR ELK + LG G+FG VYKG+ +A+K L+
Sbjct: 2 TAPNQAQLRILKETELKRV-----KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT 56
Query: 544 QERER-EFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP-KPD 601
+ EF E + H +LV+LLG C +L V + M +G L +
Sbjct: 57 GPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIG 115
Query: 602 WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQS 661
L + ++IA+G++YL E ++H D+ +N+L+ + KI+DFGL++LL D+
Sbjct: 116 SQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 172
Query: 662 RTHTMIRGTR---GYVAPEWFKNAPVSAKVDVYSFGVMLLEII 701
+ G + ++A E + + DV+S+GV + E++
Sbjct: 173 EYNA--DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 213
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 19/196 (9%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
+LG+G FG V+ G + AI K ++ E F E + + H+ LVQL
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQLYAV 72
Query: 572 CDEALNRLLVYEFMGNGTLANLI-------FAIPKPDWNLRVRISLEIARGLVYLHEECN 624
E +V E+M G+L + + +P+ V ++ +IA G+ Y+
Sbjct: 73 VSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-----LVDMAAQIASGMAYVE---R 123
Query: 625 VPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
+ +H D++ NIL+ K++DFGL++L+ ++ + + APE
Sbjct: 124 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 183
Query: 685 SAKVDVYSFGVMLLEI 700
+ K DV+SFG++L E+
Sbjct: 184 TIKSDVWSFGILLTEL 199
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 19/196 (9%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
+LG+G FG V+ G + AI K ++ E F E + + H+ LVQL
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKIRHEKLVQLYAV 81
Query: 572 CDEALNRLLVYEFMGNGTLANLI-------FAIPKPDWNLRVRISLEIARGLVYLHEECN 624
E +V E+M G+L + + +P+ V ++ +IA G+ Y+
Sbjct: 82 VSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-----LVDMAAQIASGMAYVE---R 132
Query: 625 VPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
+ +H D++ NIL+ K++DFGL++L+ ++ + + APE
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 685 SAKVDVYSFGVMLLEI 700
+ K DV+SFG++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
+LG+G FG V+ G + AI K ++ E F E + + H+ LVQL
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQLYAV 247
Query: 572 CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNL--RVRISLEIARGLVYLHEECNVPIIH 629
E +V E+M G+L + + L V ++ +IA G+ Y+ + +H
Sbjct: 248 VSEE-PIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 303
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
D++ NIL+ K++DFGL++L+ ++ + + APE + K D
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 690 VYSFGVMLLEI 700
V+SFG++L E+
Sbjct: 364 VWSFGILLTEL 374
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 19/196 (9%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
+LG+G FG V+ G + AI K ++ E F E + + H+ LVQL
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQLYAV 70
Query: 572 CDEALNRLLVYEFMGNGTLANLI-------FAIPKPDWNLRVRISLEIARGLVYLHEECN 624
E +V E+M G+L + + +P+ V ++ +IA G+ Y+
Sbjct: 71 VSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-----LVDMAAQIASGMAYVE---R 121
Query: 625 VPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
+ +H D++ NIL+ K++DFGL++L+ ++ + + APE
Sbjct: 122 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 181
Query: 685 SAKVDVYSFGVMLLEI 700
+ K DV+SFG++L E+
Sbjct: 182 TIKSDVWSFGILLTEL 197
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 19/196 (9%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
+LG+G FG V+ G + AI K ++ E F E + + H+ LVQL
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQLYAV 81
Query: 572 CDEALNRLLVYEFMGNGTLANLI-------FAIPKPDWNLRVRISLEIARGLVYLHEECN 624
E +V E+M G+L + + +P+ V ++ +IA G+ Y+ E N
Sbjct: 82 VSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQ-----LVDMAAQIASGMAYV-ERMN 134
Query: 625 VPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
+H D++ NIL+ K++DFGL++L+ ++ + + APE
Sbjct: 135 Y--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 685 SAKVDVYSFGVMLLEI 700
+ K DV+SFG++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVK----KLDRLAQ-EREREFKSEVSAIGRTHHKNL 565
E+LG GSFG+V +G + SGK ++V K D L+Q E +F EV+A+ H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRV----RISLEIARGLVYLHE 621
++L G + +V E L +L+ + K + + R ++++A G+ YL
Sbjct: 74 IRLYGVVLTPPMK-MVTEL---APLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 622 ECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR----GYVAPE 677
+ IH D+ +N+LL KI DFGL + L Q+ H +++ R + APE
Sbjct: 130 K---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL--PQNDDHXVMQEHRKVPFAWCAPE 184
Query: 678 WFKNAPVSAKVDVYSFGVMLLEI 700
K S D + FGV L E+
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEM 207
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 512 ELGRGSFGIVYKGVLKSASGKA-IAVKKLDRLAQERE-REFKSEVSAIGRTHHKNLVQLL 569
ELG G+FG V +GV + + +A+K L + ++ + E E + + + +V+L+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 570 GFCD-EALNRLLVYEFMGNGTLANLIFAIPK--PDWNLRVRISLEIARGLVYLHEECNVP 626
G C EAL +LV E G G L + + P N+ + +++ G+ YL E+
Sbjct: 403 GVCQAEAL--MLVMEMAGGGPLHKFLVGKREEIPVSNV-AELLHQVSMGMKYLEEKN--- 456
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGT--RGYVAPEWFKNAPV 684
+H ++ +N+LL N AKISDFGLSK L +D S G + APE
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 516
Query: 685 SAKVDVYSFGVMLLEII 701
S++ DV+S+GV + E +
Sbjct: 517 SSRSDVWSYGVTMWEAL 533
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 28/209 (13%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLG 570
E +G G FG V+K + GK +K++ ++ ERE V A+ + H N+V G
Sbjct: 17 ELIGSGGFGQVFKAKHR-IDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIVHYNG 71
Query: 571 FCD------EALNR----------LLVYEFMGNGTLANLIFAI--PKPDWNLRVRISLEI 612
D E ++ + EF GTL I K D L + + +I
Sbjct: 72 CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQI 131
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG 672
+G+ Y+H + +I+ D+KP NI L + KI DFGL L +D R + +GT
Sbjct: 132 TKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS--KGTLR 186
Query: 673 YVAPEWFKNAPVSAKVDVYSFGVMLLEII 701
Y++PE + +VD+Y+ G++L E++
Sbjct: 187 YMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 19/196 (9%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
+LG+G FG V+ G + AI K ++ E F E + + H+ LVQL
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQLYAV 81
Query: 572 CDEALNRLLVYEFMGNGTLANLI-------FAIPKPDWNLRVRISLEIARGLVYLHEECN 624
E +V E+M G+L + + +P+ V ++ +IA G+ Y+
Sbjct: 82 VSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-----LVDMAAQIASGMAYVE---R 132
Query: 625 VPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
+ +H D++ NIL+ K++DFGL++L+ ++ + + APE
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 685 SAKVDVYSFGVMLLEI 700
+ K DV+SFG++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLVQLLG 570
ELG G+ G+V+K V SG +A K + + R + E+ + + +V G
Sbjct: 13 ELGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 571 --FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+ D ++ + E M G+L ++ + + ++S+ + +GL YL E+ I+
Sbjct: 72 AFYSDGEIS--ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 127
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
H D+KP NIL+++ K+ DFG+S L+ + + GTR Y++PE + S +
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQS 184
Query: 689 DVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEG 730
D++S G+ L+E+ R + +E + + C EG
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKE-----LELMFGCQVEG 221
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 11/199 (5%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLVQLLG 570
ELG G+ G+V+K V SG +A K + + R + E+ + + +V G
Sbjct: 40 ELGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 98
Query: 571 --FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+ D ++ + E M G+L ++ + + ++S+ + +GL YL E+ I+
Sbjct: 99 AFYSDGEIS--ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 154
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
H D+KP NIL+++ K+ DFG+S L+ + + GTR Y++PE + S +
Sbjct: 155 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQS 211
Query: 689 DVYSFGVMLLEIICCRRSV 707
D++S G+ L+E+ R +
Sbjct: 212 DIWSMGLSLVEMAVGRYPI 230
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 98/212 (46%), Gaps = 19/212 (8%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E+ + +++LG G FG V+ + A+ K ++ E F +E + +
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE---AFLAEANVMKTL 67
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFA-------IPKPDWNLRVRISLEIA 613
H LV+L + ++ EFM G+L + + + +PK + S +IA
Sbjct: 68 QHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPK-----LIDFSAQIA 121
Query: 614 RGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGY 673
G+ ++ + IH D++ NIL+ KI+DFGL++++ ++ + +
Sbjct: 122 EGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW 178
Query: 674 VAPEWFKNAPVSAKVDVYSFGVMLLEIICCRR 705
APE + K DV+SFG++L+EI+ R
Sbjct: 179 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 98/212 (46%), Gaps = 19/212 (8%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E+ + +++LG G FG V+ + A+ K ++ E F +E + +
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE---AFLAEANVMKTL 240
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFA-------IPKPDWNLRVRISLEIA 613
H LV+L + ++ EFM G+L + + + +PK + S +IA
Sbjct: 241 QHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPK-----LIDFSAQIA 294
Query: 614 RGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGY 673
G+ ++ + IH D++ NIL+ KI+DFGL++++ ++ + +
Sbjct: 295 EGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW 351
Query: 674 VAPEWFKNAPVSAKVDVYSFGVMLLEIICCRR 705
APE + K DV+SFG++L+EI+ R
Sbjct: 352 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVK----KLDRLAQ-EREREFKSEVSAIGRTHHKNL 565
E+LG GSFG+V +G + SGK ++V K D L+Q E +F EV+A+ H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRV----RISLEIARGLVYLHE 621
++L G + +V E L +L+ + K + + R ++++A G+ YL
Sbjct: 74 IRLYGVVLTPPMK-MVTEL---APLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 622 ECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR----GYVAPE 677
+ IH D+ +N+LL KI DFGL + L Q+ H +++ R + APE
Sbjct: 130 K---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL--PQNDDHYVMQEHRKVPFAWCAPE 184
Query: 678 WFKNAPVSAKVDVYSFGVMLLEI 700
K S D + FGV L E+
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEM 207
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 19/223 (8%)
Query: 487 SSTSETNLRFFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKLDRLA 543
++ ++ LR ELK + LG G+FG VYKG+ +A+K L+
Sbjct: 25 TAPNQAQLRILKETELKRV-----KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT 79
Query: 544 QERER-EFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIP-KPD 601
+ EF E + H +LV+LLG C +L V + M +G L +
Sbjct: 80 GPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIG 138
Query: 602 WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQS 661
L + ++IA+G++YL E ++H D+ +N+L+ + KI+DFGL++LL D+
Sbjct: 139 SQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 195
Query: 662 RTHTMIRGTR---GYVAPEWFKNAPVSAKVDVYSFGVMLLEII 701
+ G + ++A E + + DV+S+GV + E++
Sbjct: 196 EYNA--DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 236
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRL---AQEREREFKSEVSAIGRTHHKNLVQ 567
+ LG G+FG V G +G +AVK L+R + + + K E+ + H ++++
Sbjct: 17 DTLGVGTFGKVKIGE-HQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
L + +V E++ G L + I + + R+ +I + Y H +
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM---V 132
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSA- 686
+H D+KP+N+LLD + +AKI+DFGLS ++ + + G+ Y APE +
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC--GSPNYAAPEVISGRLYAGP 190
Query: 687 KVDVYSFGVMLLEIIC 702
+VD++S GV+L ++C
Sbjct: 191 EVDIWSCGVILYALLC 206
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 19/196 (9%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
+LG+G FG V+ G + AI K ++ E F E + + H+ LVQL
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE---AFLQEAQVMKKLRHEKLVQLYAV 248
Query: 572 CDEALNRLLVYEFMGNGTLANLI-------FAIPKPDWNLRVRISLEIARGLVYLHEECN 624
E +V E+M G+L + + +P+ V ++ +IA G+ Y+
Sbjct: 249 VSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-----LVDMAAQIASGMAYVE---R 299
Query: 625 VPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
+ +H D++ NIL+ K++DFGL +L+ ++ + + APE
Sbjct: 300 MNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRF 359
Query: 685 SAKVDVYSFGVMLLEI 700
+ K DV+SFG++L E+
Sbjct: 360 TIKSDVWSFGILLTEL 375
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 129/297 (43%), Gaps = 46/297 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERE-REFKSEVSA-IGRTHHKNLV 566
LGRG+FG V + G+ K+A+ + +AVK L A E R SE+ I HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 567 QLLGFCDEALNRLLVY-EFMGNGTLANLI---------FAIPKPDW-------NLRVRIS 609
LLG C + L+V EF G L+ + + + D + S
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 610 LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM-IR 668
++A+G+ +L + IH D+ +NILL KI DFGL++ + D R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 669 GTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVE--MEVEEEGRAILTDWAYDC 726
++APE + + + DV+SFGV+L EI S ++++EE L
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK------ 256
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEV 783
EG D P M + C +PS+RPT +++ L LL+
Sbjct: 257 --EGTRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 302
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 46/291 (15%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQ 567
+E +G G+ +V K +A+K+++ Q E E+ A+ + HH N+V
Sbjct: 14 LQEVIGSGATAVVQAAYCAPKKEK-VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS 72
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP--------DWNLRVRISLEIARGLVYL 619
LV + + G++ ++I I D + I E+ GL YL
Sbjct: 73 YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 132
Query: 620 HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR----GTRGYVA 675
H+ IH D+K NILL S +I+DFG+S L + T +R GT ++A
Sbjct: 133 HKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 189
Query: 676 PEWFKNA-PVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDV 734
PE + K D++SFG+ +E+ G A Y Y ++ +
Sbjct: 190 PEVMEQVRGYDFKADIWSFGITAIELAT------------GAA-----PYHKYPPMKVLM 232
Query: 735 LVDSDEP-----AMADRSRLQKW-----LMIAMWCIREDPSKRPTMKVVLQ 775
L ++P + D+ L+K+ MI++ C+++DP KRPT +L+
Sbjct: 233 LTLQNDPPSLETGVQDKEMLKKYGKSFRKMISL-CLQKDPEKRPTAAELLR 282
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVK----KLDRLAQ-EREREFKSEVSAIGRTHHKNL 565
E+LG GSFG+V +G + SGK ++V K D L+Q E +F EV+A+ H+NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRV----RISLEIARGLVYLHE 621
++L G + +V E L +L+ + K + + R ++++A G+ YL
Sbjct: 84 IRLYGVVLTPPMK-MVTEL---APLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 139
Query: 622 ECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR----GYVAPE 677
+ IH D+ +N+LL KI DFGL + L Q+ H +++ R + APE
Sbjct: 140 K---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL--PQNDDHYVMQEHRKVPFAWCAPE 194
Query: 678 WFKNAPVSAKVDVYSFGVMLLEI 700
K S D + FGV L E+
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEM 217
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 129/291 (44%), Gaps = 46/291 (15%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQ 567
+E +G G+ +V + + + +A+K+++ Q E E+ A+ + HH N+V
Sbjct: 19 LQEVIGSGATAVV-QAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS 77
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP--------DWNLRVRISLEIARGLVYL 619
LV + + G++ ++I I D + I E+ GL YL
Sbjct: 78 YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 137
Query: 620 HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR----GTRGYVA 675
H+ IH D+K NILL S +I+DFG+S L + T +R GT ++A
Sbjct: 138 HKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 194
Query: 676 PEWFKNA-PVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDV 734
PE + K D++SFG+ +E+ G A Y Y ++ +
Sbjct: 195 PEVMEQVRGYDFKADIWSFGITAIELAT------------GAA-----PYHKYPPMKVLM 237
Query: 735 LVDSDEP-----AMADRSRLQKW-----LMIAMWCIREDPSKRPTMKVVLQ 775
L ++P + D+ L+K+ MI++ C+++DP KRPT +L+
Sbjct: 238 LTLQNDPPSLETGVQDKEMLKKYGKSFRKMISL-CLQKDPEKRPTAAELLR 287
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 129/297 (43%), Gaps = 46/297 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERE-REFKSEVSA-IGRTHHKNLV 566
LGRG+FG V + G+ K+A+ + +AVK L A E R SE+ I HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 567 QLLGFCDEALNRLLVY-EFMGNGTLANLI---------FAIPKPDW-------NLRVRIS 609
LLG C + L+V EF G L+ + + + D + S
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 610 LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM-IR 668
++A+G+ +L + IH D+ +NILL KI DFGL++ + D R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 669 GTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVE--MEVEEEGRAILTDWAYDC 726
++APE + + + DV+SFGV+L EI S ++++EE L
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK------ 256
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEV 783
EG D P M + C +PS+RPT +++ L LL+
Sbjct: 257 --EGTRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 302
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLVQLLG 570
ELG G+ G+V+K V SG +A K + + R + E+ + + +V G
Sbjct: 13 ELGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 571 --FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+ D ++ + E M G+L ++ + + ++S+ + +GL YL E+ I+
Sbjct: 72 AFYSDGEIS--ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 127
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
H D+KP NIL+++ K+ DFG+S L+ + + GTR Y++PE + S +
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQS 184
Query: 689 DVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEG 730
D++S G+ L+E+ R + +E + + C EG
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKE-----LELMFGCQVEG 221
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERER-EFKSEVSAIGRTHHKNLVQLLG 570
ELG G+ G+V+K V SG +A K + + R + E+ + + +V G
Sbjct: 13 ELGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 571 --FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+ D ++ + E M G+L ++ + + ++S+ + +GL YL E+ I+
Sbjct: 72 AFYSDGEIS--ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 127
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
H D+KP NIL+++ K+ DFG+S L+ + + GTR Y++PE + S +
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQS 184
Query: 689 DVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEG 730
D++S G+ L+E+ R + +E + + C EG
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKE-----LELMFGCQVEG 221
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 129/297 (43%), Gaps = 46/297 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERE-REFKSEVSA-IGRTHHKNLV 566
LGRG+FG V + G+ K+A+ + +AVK L A E R SE+ I HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 567 QLLGFCDEALNRLLV-YEFMGNGTLANLI---------FAIPKPDW-------NLRVRIS 609
LLG C + L+V EF G L+ + + + D + S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 610 LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM-IR 668
++A+G+ +L + IH D+ +NILL KI DFGL++ + D R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 669 GTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVE--MEVEEEGRAILTDWAYDC 726
++APE + + + DV+SFGV+L EI S ++++EE L
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK------ 265
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEV 783
EG D P M + C +PS+RPT +++ L LL+
Sbjct: 266 --EGTRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 129/297 (43%), Gaps = 46/297 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERE-REFKSEVSA-IGRTHHKNLV 566
LGRG+FG V + G+ K+A+ + +AVK L A E R SE+ I HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 567 QLLGFCDEALNRLLV-YEFMGNGTLANLI---------FAIPKPDW-------NLRVRIS 609
LLG C + L+V EF G L+ + + + D + S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 610 LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM-IR 668
++A+G+ +L + IH D+ +NILL KI DFGL++ + D R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 669 GTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVE--MEVEEEGRAILTDWAYDC 726
++APE + + + DV+SFGV+L EI S ++++EE L
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK------ 265
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEV 783
EG D P M + C +PS+RPT +++ L LL+
Sbjct: 266 --EGTRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 19/196 (9%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
+LG+G FG V+ G + AI K ++ E F E + + H+ LVQL
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQLYAV 81
Query: 572 CDEALNRLLVYEFMGNGTLANLI-------FAIPKPDWNLRVRISLEIARGLVYLHEECN 624
E +V E+M G+L + + +P+ V ++ +IA G+ Y+
Sbjct: 82 VSEE-PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQ-----LVDMAAQIASGMAYVE---R 132
Query: 625 VPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
+ +H D++ NIL+ K++DFGL++L+ ++ + + APE
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 685 SAKVDVYSFGVMLLEI 700
+ K DV+SFG++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 11/211 (5%)
Query: 497 FSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERER-EFKSEVS 555
+ ELK+ ELG G+ G+V+K V SG +A K + + R + E+
Sbjct: 1 MALGELKDDDFEKISELGAGNGGVVFK-VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ 59
Query: 556 AIGRTHHKNLVQLLG--FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIA 613
+ + +V G + D ++ + E M G+L ++ + + ++S+ +
Sbjct: 60 VLHECNSPYIVGFYGAFYSDGEIS--ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 117
Query: 614 RGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGY 673
+GL YL E+ I+H D+KP NIL+++ K+ DFG+S L+ + + GTR Y
Sbjct: 118 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV---GTRSY 172
Query: 674 VAPEWFKNAPVSAKVDVYSFGVMLLEIICCR 704
++PE + S + D++S G+ L+E+ R
Sbjct: 173 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 129/297 (43%), Gaps = 46/297 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERE-REFKSEVSA-IGRTHHKNLV 566
LGRG+FG V + G+ K+A+ + +AVK L A E R SE+ I HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 567 QLLGFCDEALNRLLV-YEFMGNGTLANLI---------FAIPKPDW-------NLRVRIS 609
LLG C + L+V EF G L+ + + + D + S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 610 LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM-IR 668
++A+G+ +L + IH D+ +NILL KI DFGL++ + D R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 669 GTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVE--MEVEEEGRAILTDWAYDC 726
++APE + + + DV+SFGV+L EI S ++++EE L
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK------ 265
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEV 783
EG D P M + C +PS+RPT +++ L LL+
Sbjct: 266 --EGTRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 129/297 (43%), Gaps = 46/297 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERE-REFKSEVSA-IGRTHHKNLV 566
LGRG+FG V + G+ K+A+ + +AVK L A E R SE+ I HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 567 QLLGFCDEALNRLLV-YEFMGNGTLANLI---------FAIPKPDW-------NLRVRIS 609
LLG C + L+V EF G L+ + + + D + S
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 610 LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM-IR 668
++A+G+ +L + IH D+ +NILL KI DFGL++ + D R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 669 GTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVE--MEVEEEGRAILTDWAYDC 726
++APE + + + DV+SFGV+L EI S ++++EE L
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK------ 256
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEV 783
EG D P M + C +PS+RPT +++ L LL+
Sbjct: 257 --EGTRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 302
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVK----KLDRLAQ-EREREFKSEVSAIGRTHHKNL 565
E+LG GSFG+V +G + SGK ++V K D L+Q E +F EV+A+ H+NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRV----RISLEIARGLVYLHE 621
++L G + +V E L +L+ + K + + R ++++A G+ YL
Sbjct: 78 IRLYGVVLTPPMK-MVTEL---APLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 133
Query: 622 ECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR----GYVAPE 677
+ IH D+ +N+LL KI DFGL + L Q+ H +++ R + APE
Sbjct: 134 K---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL--PQNDDHYVMQEHRKVPFAWCAPE 188
Query: 678 WFKNAPVSAKVDVYSFGVMLLEI 700
K S D + FGV L E+
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEM 211
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 129/297 (43%), Gaps = 46/297 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERE-REFKSEVSA-IGRTHHKNLV 566
LGRG+FG V + G+ K+A+ + +AVK L A E R SE+ I HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 567 QLLGFCDEALNRLLVY-EFMGNGTLANLI---------FAIPKPDW-------NLRVRIS 609
LLG C + L+V EF G L+ + + + D + S
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 610 LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM-IR 668
++A+G+ +L + IH D+ +NILL KI DFGL++ + D R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 669 GTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVE--MEVEEEGRAILTDWAYDC 726
++APE + + + DV+SFGV+L EI S ++++EE L
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK------ 256
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEV 783
EG D P M + C +PS+RPT +++ L LL+
Sbjct: 257 --EGTRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 302
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 19/196 (9%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
+LG+G FG V+ G + AI K ++ E F E + + H+ LVQL
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQLYAV 81
Query: 572 CDEALNRLLVYEFMGNGTLANLI-------FAIPKPDWNLRVRISLEIARGLVYLHEECN 624
E +V E+M G L + + +P+ V ++ +IA G+ Y+
Sbjct: 82 VSEE-PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQ-----LVDMAAQIASGMAYVE---R 132
Query: 625 VPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
+ +H D++ NIL+ K++DFGL++L+ ++ + + APE
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 685 SAKVDVYSFGVMLLEI 700
+ K DV+SFG++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G+VYK K +G+ +A+KK+ RL E E + E+S + +H N+V+
Sbjct: 12 EKIGEGTYGVVYKARNK-LTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 568 LLGFCDEALNRLLVYEFMGNGTL----ANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
LL LV+E + A+ + IP P L ++ +GL + H
Sbjct: 70 LLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHSHR 126
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KPQN+L++ + K++DFGL++ RT+ T Y APE
Sbjct: 127 ---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 684 -VSAKVDVYSFGVMLLEIICCR 704
S VD++S G + E++ R
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVK----KLDRLAQ-EREREFKSEVSAIGRTHHKNL 565
E+LG GSFG+V +G + SGK ++V K D L+Q E +F EV+A+ H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRV----RISLEIARGLVYLHE 621
++L G + +V E L +L+ + K + + R ++++A G+ YL
Sbjct: 74 IRLYGVVLTPPMK-MVTEL---APLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 622 ECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR----GYVAPE 677
+ IH D+ +N+LL KI DFGL + L Q+ H +++ R + APE
Sbjct: 130 K---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL--PQNDDHYVMQEHRKVPFAWCAPE 184
Query: 678 WFKNAPVSAKVDVYSFGVMLLEI 700
K S D + FGV L E+
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEM 207
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 130/297 (43%), Gaps = 46/297 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERE-REFKSEVSA-IGRTHHKNLV 566
LGRG+FG V + G+ K+A+ + +AVK L A E R SE+ I HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 567 QLLGFCDEALNRLLV-YEFMGNGTLANLIFA-----IPKPD-----------WNLRVRIS 609
LLG C + L+V EF G L+ + + +P + + S
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 610 LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM-IR 668
++A+G+ +L + IH D+ +NILL KI DFGL++ + D R
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 669 GTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVE--MEVEEEGRAILTDWAYDC 726
++APE + + + DV+SFGV+L EI S ++++EE L
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK------ 267
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEV 783
EG D P M + C +PS+RPT +++ L LL+
Sbjct: 268 --EGTRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 313
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 24/219 (10%)
Query: 509 FKEELGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNL 565
+ +LG+G+FG V L +G +AVK+L +++R+F+ E+ + H +
Sbjct: 14 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 73
Query: 566 VQLLG--FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
V+ G + + LV E++ +G L D+ R R L+ +R L+Y + C
Sbjct: 74 VKYRGVSYGPGRQSLRLVMEYLPSGCLR---------DFLQRHRARLDASRLLLYSSQIC 124
Query: 624 -------NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG--YV 674
+ +H D+ +NIL+++ KI+DFGL+KLL D+ G +
Sbjct: 125 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 184
Query: 675 APEWFKNAPVSAKVDVYSFGVMLLEIIC-CRRSVEMEVE 712
APE + S + DV+SFGV+L E+ C +S E
Sbjct: 185 APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 223
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 19/196 (9%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
+LG+G FG V+ G + AI K ++ E F E + + H+ LVQL
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQLYAV 81
Query: 572 CDEALNRLLVYEFMGNGTLANLI-------FAIPKPDWNLRVRISLEIARGLVYLHEECN 624
E +V E+M G L + + +P+ V ++ +IA G+ Y+
Sbjct: 82 VSEE-PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQ-----LVDMAAQIASGMAYVE---R 132
Query: 625 VPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
+ +H D++ NIL+ K++DFGL++L+ ++ + + APE
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 685 SAKVDVYSFGVMLLEI 700
+ K DV+SFG++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 18/197 (9%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG V+ G +++ A+ K ++ + F E + + H LV+L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQ---AFLEEANLMKTLQHDKLVRLYAVV 77
Query: 573 DEALNRLLVYEFMGNGTLANLI-------FAIPKPDWNLRVRISLEIARGLVYLHEECNV 625
++ E+M G+L + + +PK + S +IA G+ Y+ +
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPK-----LIDFSAQIAEGMAYIERKN-- 130
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
IH D++ N+L+ KI+DFGL++++ ++ + + APE +
Sbjct: 131 -YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFT 189
Query: 686 AKVDVYSFGVMLLEIIC 702
K DV+SFG++L EI+
Sbjct: 190 IKSDVWSFGILLYEIVT 206
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 509 FKEELGR-GSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQ 567
F E +G G FG VYK K S A A K +D ++E ++ E+ + H N+V+
Sbjct: 13 FWEIIGELGDFGKVYKAQNKETSVLA-AAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 71
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLHEECNVP 626
LL N ++ EF G + ++ + +P ++++ + L YLH+
Sbjct: 72 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---K 128
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR----GTRGYVAPEWF--- 679
IIH D+K NIL K++DFG+S + +RT R GT ++APE
Sbjct: 129 IIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRTXIQRRDSFIGTPYWMAPEVVMCE 184
Query: 680 --KNAPVSAKVDVYSFGVMLLEI 700
K+ P K DV+S G+ L+E+
Sbjct: 185 TSKDRPYDYKADVWSLGITLIEM 207
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 109/226 (48%), Gaps = 18/226 (7%)
Query: 489 TSETNLRFFSYNELKEATGGFKE-------ELGRGSFGIVYKGVLKSASGKAIAVKKLDR 541
T + R ++ K+ G K+ ELG G+ G+V+K V SG +A K +
Sbjct: 2 TLQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK-VSHKPSGLVMARKLIHL 60
Query: 542 LAQERER-EFKSEVSAIGRTHHKNLVQLLG--FCDEALNRLLVYEFMGNGTLANLIFAIP 598
+ R + E+ + + +V G + D ++ + E M G+L ++
Sbjct: 61 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS--ICMEHMDGGSLDQVLKKAG 118
Query: 599 KPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS 658
+ + ++S+ + +GL YL E+ I+H D+KP NIL+++ K+ DFG+S L+
Sbjct: 119 RIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 176
Query: 659 DQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCR 704
+ + GTR Y++PE + S + D++S G+ L+E+ R
Sbjct: 177 SMANSFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 24/219 (10%)
Query: 509 FKEELGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNL 565
+ +LG+G+FG V L +G +AVK+L +++R+F+ E+ + H +
Sbjct: 15 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 74
Query: 566 VQLLG--FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
V+ G + + LV E++ +G L D+ R R L+ +R L+Y + C
Sbjct: 75 VKYRGVSYGPGRQSLRLVMEYLPSGCLR---------DFLQRHRARLDASRLLLYSSQIC 125
Query: 624 -------NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG--YV 674
+ +H D+ +NIL+++ KI+DFGL+KLL D+ G +
Sbjct: 126 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 185
Query: 675 APEWFKNAPVSAKVDVYSFGVMLLEIIC-CRRSVEMEVE 712
APE + S + DV+SFGV+L E+ C +S E
Sbjct: 186 APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 224
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 509 FKEELGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNL 565
+ +LG+G+FG V L +G +AVK+L +++R+F+ E+ + H +
Sbjct: 11 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 70
Query: 566 VQLLG--FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
V+ G + LV E++ +G L D+ R R L+ +R L+Y + C
Sbjct: 71 VKYRGVSYGPGRPELRLVMEYLPSGCLR---------DFLQRHRARLDASRLLLYSSQIC 121
Query: 624 -------NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG--YV 674
+ +H D+ +NIL+++ KI+DFGL+KLL D+ G +
Sbjct: 122 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY 181
Query: 675 APEWFKNAPVSAKVDVYSFGVMLLEIIC-CRRSVEMEVE 712
APE + S + DV+SFGV+L E+ C +S E
Sbjct: 182 APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 220
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 129/297 (43%), Gaps = 46/297 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQERE-REFKSEVSA-IGRTHHKNLV 566
LGRG+FG V + G+ K+A+ + +AVK L A E R SE+ I HH N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 567 QLLGFCDEALNRLLV-YEFMGNGTLANLI---------FAIPKPDW-------NLRVRIS 609
LLG C + L+V EF G L+ + + + D + S
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 610 LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM-IR 668
++A+G+ +L + IH D+ +NILL KI DFGL++ + D R
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 669 GTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVE--MEVEEEGRAILTDWAYDC 726
++APE + + + DV+SFGV+L EI S ++++EE L
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK------ 302
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEV 783
EG D P M + C +PS+RPT +++ L LL+
Sbjct: 303 --EGTRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 19/196 (9%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGF 571
+LG+G FG V+ G + AI K ++ E F E + + H+ LVQL
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQLYAV 81
Query: 572 CDEALNRLLVYEFMGNGTLANLI-------FAIPKPDWNLRVRISLEIARGLVYLHEECN 624
E +V E+M G+L + + +P+ V ++ +IA G+ Y+
Sbjct: 82 VSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-----LVDMAAQIASGMAYVE---R 132
Query: 625 VPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
+ +H D+ NIL+ K++DFGL++L+ ++ + + APE
Sbjct: 133 MNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 685 SAKVDVYSFGVMLLEI 700
+ K DV+SFG++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 17/196 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQLL 569
LG GSFG V+ + +G+ A+K L + R ++ + E + H ++++
Sbjct: 14 LGTGSFGRVHL-IRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMW 72
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFA---IPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G +A ++ +++ G L +L+ P P + E+ L YLH +
Sbjct: 73 GTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF---YAAEVCLALEYLHSK---D 126
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSA 686
II+ D+KP+NILLD KI+DFG +K + + GT Y+APE P +
Sbjct: 127 IIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYXLCGTPDYIAPEVVSTKPYNK 182
Query: 687 KVDVYSFGVMLLEIIC 702
+D +SFG+++ E++
Sbjct: 183 SIDWWSFGILIYEMLA 198
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 24/219 (10%)
Query: 509 FKEELGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNL 565
+ +LG+G+FG V L +G +AVK+L +++R+F+ E+ + H +
Sbjct: 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 86
Query: 566 VQLLG--FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
V+ G + + LV E++ +G L D+ R R L+ +R L+Y + C
Sbjct: 87 VKYRGVSYGPGRQSLRLVMEYLPSGCLR---------DFLQRHRARLDASRLLLYSSQIC 137
Query: 624 -------NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG--YV 674
+ +H D+ +NIL+++ KI+DFGL+KLL D+ G +
Sbjct: 138 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 197
Query: 675 APEWFKNAPVSAKVDVYSFGVMLLEIIC-CRRSVEMEVE 712
APE + S + DV+SFGV+L E+ C +S E
Sbjct: 198 APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 236
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 16/197 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLG 570
++LG G FG V+ G +++ A+ K ++ + F E + + H LV+L
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQ---AFLEEANLMKTLQHDKLVRLYA 74
Query: 571 FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRI------SLEIARGLVYLHEECN 624
+ ++ EFM G+L + + K D +V + S +IA G+ Y+ +
Sbjct: 75 VVTKEEPIYIITEFMAKGSLLDFL----KSDEGGKVLLPKLIDFSAQIAEGMAYIERKN- 129
Query: 625 VPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IH D++ N+L+ KI+DFGL++++ ++ + + APE
Sbjct: 130 --YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCF 187
Query: 685 SAKVDVYSFGVMLLEII 701
+ K +V+SFG++L EI+
Sbjct: 188 TIKSNVWSFGILLYEIV 204
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 106/210 (50%), Gaps = 25/210 (11%)
Query: 511 EELGRGSFGIVYKGVLKSAS--GKAIAVKKLD--RLAQEREREFKSEVSAIGRTHHKNLV 566
+++G GSFG K +L ++ G+ +K+++ R++ + E + EV+ + H N+V
Sbjct: 30 QKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIV 86
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP--------DWNLRVRISLEIARGLVY 618
Q +E + +V ++ G L I A DW +++ ++L+ +
Sbjct: 87 QYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK------H 140
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
+H+ I+H DIK QNI L + ++ DFG++++L S I GT Y++PE
Sbjct: 141 VHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACI-GTPYYLSPEI 196
Query: 679 FKNAPVSAKVDVYSFGVMLLEIICCRRSVE 708
+N P + K D+++ G +L E+ + + E
Sbjct: 197 CENKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 95/215 (44%), Gaps = 30/215 (13%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLG 570
E +GRG +G VYKG L + +AVK A + + + + H N+ + +
Sbjct: 19 ELIGRGRYGAVYKGSLDE---RPVAVKVFS-FANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 571 -----FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC-- 623
D + LLV E+ NG+L + ++ DW R++ + RGL YLH E
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYL-SLHTSDWVSSCRLAHSVTRGLAYLHTELPR 133
Query: 624 ----NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLL-------SDQSRTHTMIRGTRG 672
I H D+ +N+L+ N + ISDFGLS L ++ GT
Sbjct: 134 GDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIR 193
Query: 673 YVAPEWFKNA-------PVSAKVDVYSFGVMLLEI 700
Y+APE + A +VD+Y+ G++ EI
Sbjct: 194 YMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 17/193 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLG 570
E LG G FG V+K ++A+G +A K + + + E K+E+S + + H NL+QL
Sbjct: 95 EILGGGRFGQVHK-CEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 571 FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNL----RVRISLEIARGLVYLHEECNVP 626
+ + +LV E++ G L + I +NL + +I G+ ++H+ +
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRII---DESYNLTELDTILFMKQICEGIRHMHQ---MY 207
Query: 627 IIHCDIKPQNILLDNYFSA--KISDFGLSKLLLSDQSRTHTMIR-GTRGYVAPEWFKNAP 683
I+H D+KP+NIL N + KI DFGL++ + R + GT ++APE
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRY---KPREKLKVNFGTPEFLAPEVVNYDF 264
Query: 684 VSAKVDVYSFGVM 696
VS D++S GV+
Sbjct: 265 VSFPTDMWSVGVI 277
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 11/216 (5%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE---REFKSEVSAIGRTHHKNLVQLL 569
LG+GSF VY+ +G +A+K +D+ A + + ++EV + H ++++L
Sbjct: 19 LGKGSFAGVYRAE-SIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKP-DWNLRVRISLEIARGLVYLHEECNVPII 628
+ +++ LV E NG + + KP N +I G++YLH I+
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GIL 134
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
H D+ N+LL + KI+DFGL+ L + +T+ GT Y++PE + +
Sbjct: 135 HRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC-GTPNYISPEIATRSAHGLES 193
Query: 689 DVYSFGVMLLEIICCRRSVEMEVEEE--GRAILTDW 722
DV+S G M ++ R + + + + +L D+
Sbjct: 194 DVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADY 229
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 513 LGRGSFGIVYKGVLKSASGK-AIAVKKLDRLAQERERE---FKSEVSAIGRTHHKNLVQL 568
LG+GSFG V+ K + AI K D + + + E + V ++ H L +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-WEHPFLTHM 83
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
N V E++ G L I + K D + + EI GL +LH + I+
Sbjct: 84 FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG---IV 140
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+K NILLD KI+DFG+ K + ++T+ GT Y+APE + V
Sbjct: 141 YRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC-GTPDYIAPEILLGQKYNHSV 199
Query: 689 DVYSFGVMLLEIICCRRSVEMEVEEE 714
D +SFGV+L E++ + + EEE
Sbjct: 200 DWWSFGVLLYEMLIGQSPFHGQDEEE 225
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 513 LGRGSFGIVYKGVLKSASGK-AIAVKKLDRLAQERERE---FKSEVSAIGRTHHKNLVQL 568
LG+GSFG V+ K + AI K D + + + E + V ++ H L +
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-WEHPFLTHM 84
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
N V E++ G L I + K D + + EI GL +LH + I+
Sbjct: 85 FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG---IV 141
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+K NILLD KI+DFG+ K + ++T+ GT Y+APE + V
Sbjct: 142 YRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC-GTPDYIAPEILLGQKYNHSV 200
Query: 689 DVYSFGVMLLEIICCRRSVEMEVEEE 714
D +SFGV+L E++ + + EEE
Sbjct: 201 DWWSFGVLLYEMLIGQSPFHGQDEEE 226
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 31/226 (13%)
Query: 500 NELKEATGGFKEELGRGSFGIVYKGVL----KSASGKAIAVKKL-DRLAQEREREFKSEV 554
E+ + F EELG FG VYKG L +A+A+K L D+ EF+ E
Sbjct: 4 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 63
Query: 555 SAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIF------------------- 595
R H N+V LLG + +++ + +G L +
Sbjct: 64 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 123
Query: 596 AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGL-SK 654
A+ PD+ V + +IA G+ YL ++H D+ +N+L+ + + KISD GL +
Sbjct: 124 ALEPPDF---VHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 655 LLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+ +D + ++APE S D++S+GV+L E+
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 223
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 31/226 (13%)
Query: 500 NELKEATGGFKEELGRGSFGIVYKGVL----KSASGKAIAVKKL-DRLAQEREREFKSEV 554
E+ + F EELG FG VYKG L +A+A+K L D+ EF+ E
Sbjct: 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 80
Query: 555 SAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIF------------------- 595
R H N+V LLG + +++ + +G L +
Sbjct: 81 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 140
Query: 596 AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGL-SK 654
A+ PD+ V + +IA G+ YL ++H D+ +N+L+ + + KISD GL +
Sbjct: 141 ALEPPDF---VHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFRE 194
Query: 655 LLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
+ +D + ++APE S D++S+GV+L E+
Sbjct: 195 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 240
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLA-QEREREFKSEVSAIGRTHH-KNLVQLL 569
E+G G+ G V+K + +G IAVK++ R +E + ++ + ++H +VQ
Sbjct: 32 EMGSGTCGQVWKMRFRK-TGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCF 90
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
G + + E MG T A + P P+ L ++++ I + L YL E+ V
Sbjct: 91 GTFITNTDVFIAMELMG--TCAEKLKKRMQGPIPERILG-KMTVAIVKALYYLKEKHGV- 146
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF-----KN 681
IH D+KP NILLD K+ DFG+S L+ D+++ + G Y+APE
Sbjct: 147 -IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA--GCAAYMAPERIDPPDPTK 203
Query: 682 APVSAKVDVYSFGVMLLEI 700
+ DV+S G+ L+E+
Sbjct: 204 PDYDIRADVWSLGISLVEL 222
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 41/225 (18%)
Query: 513 LGRGSFGIVYKGVLKSASGKA----IAVKKLDRLAQERE-REFKSEVSAIGRTHHKNLVQ 567
LG G FG V K G+A +AVK L A E R+ SE + + + +H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLI-------------------FAIPKPDWNLR--- 605
L G C + LL+ E+ G+L + ++ PD
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 606 --VRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRT 663
+ + +I++G+ YL E + ++H D+ +NIL+ KISDFGLS+ D
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSR----DVYEE 203
Query: 664 HTMIRGTRGYVAPEWFKNAPV-----SAKVDVYSFGVMLLEIICC 703
+ ++ ++G + +W + + + DV+SFGV+L EI+
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 130/274 (47%), Gaps = 53/274 (19%)
Query: 474 KWRRR-KYENNVQ--------DSSTSETNLRFFSYN---ELKEATGGFKEELGRGSFGIV 521
K++++ +YE+ +Q D+ + R + Y+ E F + LG G+FG V
Sbjct: 2 KYKKQFRYESQLQMVQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKV 61
Query: 522 YK----GVLKSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRT-HHKNLVQLLGFCDEA 575
G+ K+ +AVK L A ERE SE+ + + H+N+V LLG C +
Sbjct: 62 MNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121
Query: 576 LNRLLVYEFMGNGTLANLI------FAIPKPDWNLRVRI-----------------SLEI 612
L++E+ G L N + F+ + ++ + R+ + ++
Sbjct: 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQV 181
Query: 613 ARGLVYLH-EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR 671
A+G+ +L + C +H D+ +N+L+ + KI DFGL++ ++SD ++ ++RG
Sbjct: 182 AKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARDIMSD---SNYVVRGNA 234
Query: 672 ----GYVAPEWFKNAPVSAKVDVYSFGVMLLEII 701
++APE + K DV+S+G++L EI
Sbjct: 235 RLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 41/225 (18%)
Query: 513 LGRGSFGIVYKGVLKSASGKA----IAVKKLDRLAQERE-REFKSEVSAIGRTHHKNLVQ 567
LG G FG V K G+A +AVK L A E R+ SE + + + +H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLI-------------------FAIPKPDWNLR--- 605
L G C + LL+ E+ G+L + ++ PD
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 606 --VRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRT 663
+ + +I++G+ YL E + ++H D+ +NIL+ KISDFGLS+ D
Sbjct: 151 DLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGLSR----DVYEE 203
Query: 664 HTMIRGTRGYVAPEWFK-----NAPVSAKVDVYSFGVMLLEIICC 703
+ ++ ++G + +W + + + DV+SFGV+L EI+
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 41/225 (18%)
Query: 513 LGRGSFGIVYKGVLKSASGKA----IAVKKLDRLAQERE-REFKSEVSAIGRTHHKNLVQ 567
LG G FG V K G+A +AVK L A E R+ SE + + + +H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLI-------------------FAIPKPDWNLR--- 605
L G C + LL+ E+ G+L + ++ PD
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 606 --VRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRT 663
+ + +I++G+ YL E + ++H D+ +NIL+ KISDFGLS+ D
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSR----DVYEE 203
Query: 664 HTMIRGTRGYVAPEWFK-----NAPVSAKVDVYSFGVMLLEIICC 703
+ ++ ++G + +W + + + DV+SFGV+L EI+
Sbjct: 204 DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 18/221 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK-SEVSAIGRTHHKNLVQLL 569
E+LG G++ VYKG L +G +A+K++ ++E E+S + H+N+V+L
Sbjct: 11 EKLGNGTYATVYKG-LNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLY 69
Query: 570 GFCDEALNRLLVYEFMGNG--------TLANLIFAIPKPDWNLRVRISLEIARGLVYLHE 621
LV+EFM N T+ N + + NL ++ +GL + HE
Sbjct: 70 DVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGL---ELNLVKYFQWQLLQGLAFCHE 126
Query: 622 ECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
I+H D+KPQN+L++ K+ DFGL++ T + T Y AP+
Sbjct: 127 N---KILHRDLKPQNLLINKRGQLKLGDFGLAR-AFGIPVNTFSSEVVTLWYRAPDVLMG 182
Query: 682 A-PVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTD 721
+ S +D++S G +L E+I + +EE ++ D
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFD 223
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 512 ELGRGSFGIVY---KGVLKSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQ 567
+LG G FG V +G+ +AVK L A + R +K E+ + +H+++++
Sbjct: 38 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 568 LLGFCDEA--LNRLLVYEFMGNGTLANLIFAIPKPDWNLR--VRISLEIARGLVYLHEEC 623
G C++A + LV E++ G+L + + P+ L + + +I G+ YLH +
Sbjct: 98 YKGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQ- 153
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG--YVAPEWFKN 681
IH D+ +N+LLDN KI DFGL+K + G + APE K
Sbjct: 154 --HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKE 211
Query: 682 APVSAKVDVYSFGVMLLEII 701
DV+SFGV L E++
Sbjct: 212 YKFYYASDVWSFGVTLYELL 231
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 511 EELGRGSFGIVYKGVLK---SASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQ 567
+ELG G+FG V KG + A+ + K + + E +E + + + + +V+
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
++G C EA + +LV E G L + + + +++ G+ YL EE N
Sbjct: 77 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-EESN--F 132
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGT--RGYVAPEWFKNAPVS 685
+H D+ +N+LL AKISDFGLSK L +D++ G + APE S
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFS 192
Query: 686 AKVDVYSFGVMLLE 699
+K DV+SFGV++ E
Sbjct: 193 SKSDVWSFGVLMWE 206
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 511 EELGRGSFGIVYKGVLK---SASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQ 567
+ELG G+FG V KG + A+ + K + + E +E + + + + +V+
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
++G C EA + +LV E G L + + + +++ G+ YL EE N
Sbjct: 93 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-EESN--F 148
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGT--RGYVAPEWFKNAPVS 685
+H D+ +N+LL AKISDFGLSK L +D++ G + APE S
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 208
Query: 686 AKVDVYSFGVMLLE 699
+K DV+SFGV++ E
Sbjct: 209 SKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 511 EELGRGSFGIVYKGVLK---SASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQ 567
+ELG G+FG V KG + A+ + K + + E +E + + + + +V+
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
++G C EA + +LV E G L + + + +++ G+ YL EE N
Sbjct: 93 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-EESN--F 148
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGT--RGYVAPEWFKNAPVS 685
+H D+ +N+LL AKISDFGLSK L +D++ G + APE S
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 208
Query: 686 AKVDVYSFGVMLLE 699
+K DV+SFGV++ E
Sbjct: 209 SKSDVWSFGVLMWE 222
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 21/227 (9%)
Query: 483 NVQDSSTSETNLRFFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRL 542
+++ S E R NE+ E G ELG G+FG VYK K +G A K ++
Sbjct: 1 SMRKSREYEHVRRDLDPNEVWEIVG----ELGDGAFGKVYKAKNKE-TGALAAAKVIETK 55
Query: 543 AQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIF----AIP 598
++E ++ E+ + H +V+LLG ++ EF G + ++ +
Sbjct: 56 SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT 115
Query: 599 KPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS 658
+P + R LE L +LH + IIH D+K N+L+ +++DFG+S L
Sbjct: 116 EPQIQVVCRQMLE---ALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK 169
Query: 659 DQSRTHTMIRGTRGYVAP-----EWFKNAPVSAKVDVYSFGVMLLEI 700
+ + I GT ++AP E K+ P K D++S G+ L+E+
Sbjct: 170 TLQKRDSFI-GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 511 EELGRGSFGIVYKGVLK---SASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQ 567
+ELG G+FG V KG + A+ + K + + E +E + + + + +V+
Sbjct: 31 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 90
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
++G C EA + +LV E G L + + + +++ G+ YL EE N
Sbjct: 91 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-EESN--F 146
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGT--RGYVAPEWFKNAPVS 685
+H D+ +N+LL AKISDFGLSK L +D++ G + APE S
Sbjct: 147 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 206
Query: 686 AKVDVYSFGVMLLE 699
+K DV+SFGV++ E
Sbjct: 207 SKSDVWSFGVLMWE 220
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 511 EELGRGSFGIVYKGVLK---SASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQ 567
+ELG G+FG V KG + A+ + K + + E +E + + + + +V+
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
++G C EA + +LV E G L + + + +++ G+ YL EE N
Sbjct: 77 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-EESN--F 132
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGT--RGYVAPEWFKNAPVS 685
+H D+ +N+LL AKISDFGLSK L +D++ G + APE S
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 192
Query: 686 AKVDVYSFGVMLLE 699
+K DV+SFGV++ E
Sbjct: 193 SKSDVWSFGVLMWE 206
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
Query: 509 FKEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLV 566
F + LG GSF +V L ++ AI + + + +E + + + E + R H V
Sbjct: 41 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 100
Query: 567 QLLGFC---DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+L FC DE L L Y NG L I I D + EI L YLH +
Sbjct: 101 KLY-FCFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 157
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEWFKN 681
IIH D+KP+NILL+ +I+DFG +K+L S Q+R + + GT YV+PE
Sbjct: 158 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTE 213
Query: 682 APVSAKVDVYSFGVMLLEIIC 702
D+++ G ++ +++
Sbjct: 214 KSACKSSDLWALGCIIYQLVA 234
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 511 EELGRGSFGIVYKGVLK---SASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQ 567
+ELG G+FG V KG + A+ + K + + E +E + + + + +V+
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 434
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
++G C EA + +LV E G L + + + +++ G+ YL EE N
Sbjct: 435 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-EESN--F 490
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGT--RGYVAPEWFKNAPVS 685
+H D+ +N+LL AKISDFGLSK L +D++ G + APE S
Sbjct: 491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 550
Query: 686 AKVDVYSFGVMLLE 699
+K DV+SFGV++ E
Sbjct: 551 SKSDVWSFGVLMWE 564
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 511 EELGRGSFGIVYKGVLK---SASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQ 567
+ELG G+FG V KG + A+ + K + + E +E + + + + +V+
Sbjct: 376 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 435
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
++G C EA + +LV E G L + + + +++ G+ YL EE N
Sbjct: 436 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-EESN--F 491
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGT--RGYVAPEWFKNAPVS 685
+H D+ +N+LL AKISDFGLSK L +D++ G + APE S
Sbjct: 492 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 551
Query: 686 AKVDVYSFGVMLLE 699
+K DV+SFGV++ E
Sbjct: 552 SKSDVWSFGVLMWE 565
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 511 EELGRGSFGIVYKGVLK---SASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQ 567
+ELG G+FG V KG + A+ + K + + E +E + + + + +V+
Sbjct: 11 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 70
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
++G C EA + +LV E G L + + + +++ G+ YL EE N
Sbjct: 71 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-EESN--F 126
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGT--RGYVAPEWFKNAPVS 685
+H D+ +N+LL AKISDFGLSK L +D++ G + APE S
Sbjct: 127 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 186
Query: 686 AKVDVYSFGVMLLE 699
+K DV+SFGV++ E
Sbjct: 187 SKSDVWSFGVLMWE 200
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 495 RFFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEV 554
R NE+ E G ELG G+FG VYK K +G A K ++ ++E ++ E+
Sbjct: 5 RDLDPNEVWEIVG----ELGDGAFGKVYKAKNKE-TGALAAAKVIETKSEEELEDYIVEI 59
Query: 555 SAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIF----AIPKPDWNLRVRISL 610
+ H +V+LLG ++ EF G + ++ + +P + R L
Sbjct: 60 EILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML 119
Query: 611 EIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGT 670
E L +LH + IIH D+K N+L+ +++DFG+S L + + I GT
Sbjct: 120 E---ALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GT 172
Query: 671 RGYVAP-----EWFKNAPVSAKVDVYSFGVMLLEI 700
++AP E K+ P K D++S G+ L+E+
Sbjct: 173 PYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 511 EELGRGSFGIVYKGVLK---SASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQ 567
+ELG G+FG V KG + A+ + K + + E +E + + + + +V+
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
++G C EA + +LV E G L + + + +++ G+ YL EE N
Sbjct: 73 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-EESN--F 128
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGT--RGYVAPEWFKNAPVS 685
+H D+ +N+LL AKISDFGLSK L +D++ G + APE S
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 188
Query: 686 AKVDVYSFGVMLLE 699
+K DV+SFGV++ E
Sbjct: 189 SKSDVWSFGVLMWE 202
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 14/214 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR---LAQEREREFKSEVSAIGRTHHKNLVQL- 568
+G+GSFG V V K+ + K A+K +++ + + R E+ + H LV L
Sbjct: 23 IGKGSFGKVCI-VQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLW 81
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F DE ++V +G +L + + +++ I E+ L YL N II
Sbjct: 82 YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFIC-ELVMALDYLQ---NQRII 137
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF---KNAPVS 685
H D+KP NILLD + I+DF ++ +L + T + GT+ Y+APE F K A S
Sbjct: 138 HRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI--TTMAGTKPYMAPEMFSSRKGAGYS 195
Query: 686 AKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAIL 719
VD +S GV E++ RR + + I+
Sbjct: 196 FAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV 229
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 8/198 (4%)
Query: 509 FKEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLV 566
F + LG GSF +V L ++ AI + + + +E + + + E + R H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+L + + NG L I I D + EI L YLH +
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--- 152
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIH D+KP+NILL+ +I+DFG +K+L S Q+R ++ + GT YV+PE
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKSA 211
Query: 685 SAKVDVYSFGVMLLEIIC 702
S D+++ G ++ +++
Sbjct: 212 SKSSDLWALGCIIYQLVA 229
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQ 567
KE LG G FG V + + + +G+ +A+K+ + + RE + E+ + + +H N+V
Sbjct: 19 MKERLGTGGFGYVLRWIHQD-TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 77
Query: 568 LLGFCDEALNRL-------LVYEFMGNGTLANLIFAIPK----PDWNLRVRISLEIARGL 616
D L +L L E+ G L + + +R +S +I+ L
Sbjct: 78 AREVPD-GLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSAL 135
Query: 617 VYLHEECNVPIIHCDIKPQNILLD---NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGY 673
YLHE IIH D+KP+NI+L KI D G +K L DQ T GT Y
Sbjct: 136 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQY 190
Query: 674 VAPEWFKNAPVSAKVDVYSFGVMLLEII 701
+APE + + VD +SFG + E I
Sbjct: 191 LAPELLEQKKYTVTVDYWSFGTLAFECI 218
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 511 EELGRGSFGIVYKGVLK---SASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQ 567
+ELG G+FG V KG + A+ + K + + E +E + + + + +V+
Sbjct: 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 82
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
++G C EA + +LV E G L + + + +++ G+ YL EE N
Sbjct: 83 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL-EESN--F 138
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGT--RGYVAPEWFKNAPVS 685
+H D+ +N+LL AKISDFGLSK L +D++ G + APE S
Sbjct: 139 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 198
Query: 686 AKVDVYSFGVMLLE 699
+K DV+SFGV++ E
Sbjct: 199 SKSDVWSFGVLMWE 212
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQ 567
KE LG G FG V + + + +G+ +A+K+ + + RE + E+ + + +H N+V
Sbjct: 18 MKERLGTGGFGYVLRWIHQD-TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76
Query: 568 LLGFCDEALNRL-------LVYEFMGNGTLANLIFAIPK----PDWNLRVRISLEIARGL 616
D L +L L E+ G L + + +R +S +I+ L
Sbjct: 77 AREVPD-GLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSAL 134
Query: 617 VYLHEECNVPIIHCDIKPQNILLD---NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGY 673
YLHE IIH D+KP+NI+L KI D G +K L DQ T GT Y
Sbjct: 135 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQY 189
Query: 674 VAPEWFKNAPVSAKVDVYSFGVMLLEII 701
+APE + + VD +SFG + E I
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECI 217
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 109/220 (49%), Gaps = 32/220 (14%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQ 567
++LG+G++GIV+K + + +G+ +AVKK+ Q + +R F+ + + H+N+V
Sbjct: 15 KKLGKGAYGIVWKSIDRR-TGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVN 73
Query: 568 LLGF--CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNV 625
LL D + LV+++M A + I +P + + ++ + + YLH
Sbjct: 74 LLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVH--KQYVVYQLIKVIKYLHSGG-- 129
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTH--------------------T 665
++H D+KP NILL+ K++DFGLS+ ++ + T+ T
Sbjct: 130 -LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188
Query: 666 MIRGTRGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
TR Y APE + K +D++S G +L EI+C +
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 26/203 (12%)
Query: 513 LGRGSFGIVYKGVLKSASG------------KAIAVKKLDRLAQEREREFKSEVSAIGRT 560
LG+GSFG V+ ++K SG K +K DR+ + ER+ EV+
Sbjct: 32 LGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN----- 84
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTL-ANLIFAIPKPDWNLRVRISLEIARGLVYL 619
H +V+L L+ +F+ G L L + + +++ ++ E+A L +L
Sbjct: 85 -HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALDHL 142
Query: 620 HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF 679
H ++ II+ D+KP+NILLD K++DFGLSK + + + ++ GT Y+APE
Sbjct: 143 H---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVV 198
Query: 680 KNAPVSAKVDVYSFGVMLLEIIC 702
+ D +SFGV++ E++
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLT 221
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 38/285 (13%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLG 570
E +G+G FG VY G + AI + ++R +++ + FK EV A +T H+N+V +G
Sbjct: 39 ELIGKGRFGQVYHG--RWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 571 FCDEALNRLLVYEFMGNGTLANLIF-AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
C + ++ TL +++ A D N +I+ EI +G+ YLH + I+H
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILH 153
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQS-RTHTMIRGTRG---YVAPEWFKN---- 681
D+K +N+ DN I+DFGL + Q+ R +R G ++APE +
Sbjct: 154 KDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPD 212
Query: 682 -----APVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCY-AEGRLDVL 735
P S DV++ G + E+ +W + AE + +
Sbjct: 213 TEEDKLPFSKHSDVFALGTIWYELHA-----------------REWPFKTQPAEAIIWQM 255
Query: 736 VDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGL 780
+P ++ ++ I ++C + +RPT ++ MLE L
Sbjct: 256 GTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKL 300
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTH---HKNLV 566
E+G G++G V+K G+ +A+K++ E + EV+ + H N+V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 567 QLLGFC-----DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRV--RISLEIARGLVYL 619
+L C D LV+E + + L + +P+P + ++ RGL +L
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 620 HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF 679
H ++H D+KPQNIL+ + K++DFGL+++ + T ++ T Y APE
Sbjct: 137 HSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVL 191
Query: 680 KNAPVSAKVDVYSFGVMLLEI 700
+ + VD++S G + E+
Sbjct: 192 LQSSYATPVDLWSVGCIFAEM 212
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 16/199 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR---LAQEREREFKSEVSAIGRTHHKNLVQLL 569
LG+G+FG V V + A+G+ A+K L + +A++ +E + T H L L
Sbjct: 13 LGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL- 70
Query: 570 GFCDEALNRL-LVYEFMGNGTLANLIFAIPKPDWNLRVRISL---EIARGLVYLHEECNV 625
+ + +RL V E+ G L F + + R EI L YLH
Sbjct: 71 KYAFQTHDRLCFVMEYANGG---ELFFHLSRERVFTEERARFYGAEIVSALEYLHSR--- 124
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+++ DIK +N++LD KI+DFGL K +SD + T GT Y+APE ++
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-GTPEYLAPEVLEDNDYG 183
Query: 686 AKVDVYSFGVMLLEIICCR 704
VD + GV++ E++C R
Sbjct: 184 RAVDWWGLGVVMYEMMCGR 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 16/199 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR---LAQEREREFKSEVSAIGRTHHKNLVQLL 569
LG+G+FG V V + A+G+ A+K L + +A++ +E + T H L L
Sbjct: 13 LGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL- 70
Query: 570 GFCDEALNRL-LVYEFMGNGTLANLIFAIPKPDWNLRVRISL---EIARGLVYLHEECNV 625
+ + +RL V E+ G L F + + R EI L YLH
Sbjct: 71 KYAFQTHDRLCFVMEYANGG---ELFFHLSRERVFTEERARFYGAEIVSALEYLHSR--- 124
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+++ DIK +N++LD KI+DFGL K +SD + T GT Y+APE ++
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-GTPEYLAPEVLEDNDYG 183
Query: 686 AKVDVYSFGVMLLEIICCR 704
VD + GV++ E++C R
Sbjct: 184 RAVDWWGLGVVMYEMMCGR 202
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 19/201 (9%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTH---HKNLV 566
E+G G++G VYK SG +A+K + E + EV+ + R H N+V
Sbjct: 11 EIGVGAYGTVYKA-RDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 567 QLLGFC-----DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVYL 619
+L+ C D + LV+E + + L + P P L + RGL +L
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 620 HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF 679
H C I+H D+KP+NIL+ + + K++DFGL+++ + ++ T Y APE
Sbjct: 129 HANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV--TLWYRAPEVL 183
Query: 680 KNAPVSAKVDVYSFGVMLLEI 700
+ + VD++S G + E+
Sbjct: 184 LQSTYATPVDMWSVGCIFAEM 204
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 119/275 (43%), Gaps = 30/275 (10%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVK--KLDRLAQERE----REFKSEVSAIGRTHHKN 564
EELG G F IV K + +GK A K K RL+ R E + EV+ + H N
Sbjct: 11 EELGSGQFAIVRK-CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN 69
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
++ L + + +L+ E + G L + + + + +I G+ YLH +
Sbjct: 70 IITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK-- 127
Query: 625 VPIIHCDIKPQNI-LLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
I H D+KP+NI LLD K+ DFG++ + + I GT +VAPE
Sbjct: 128 -RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPEIVN 184
Query: 681 NAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDE 740
P+ + D++S GV+ ++ E ++E ++ YD DE
Sbjct: 185 YEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF------------DE 232
Query: 741 PAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
++ S L K + + +DP +R T+ L+
Sbjct: 233 EYFSNTSELAKDFIRRLLV--KDPKRRMTIAQSLE 265
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 97/192 (50%), Gaps = 10/192 (5%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD--RLAQEREREFKSEVSAIGRTHHKNLVQL 568
EELG+G+F +V + V K +G+ A K ++ +L+ ++ + E H N+V+L
Sbjct: 28 EELGKGAFSVVRRCV-KVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 86
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
E + L+++ + G L I A +I +++ H+ + ++
Sbjct: 87 HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVV 143
Query: 629 HCDIKPQNILLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
H D+KP+N+LL + + K++DFGL+ + + + + GT GY++PE + P
Sbjct: 144 HRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYG 202
Query: 686 AKVDVYSFGVML 697
VD+++ GV+L
Sbjct: 203 KPVDLWACGVIL 214
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 16/199 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR---LAQEREREFKSEVSAIGRTHHKNLVQLL 569
LG+G+FG V V + A+G+ A+K L + +A++ +E + T H L L
Sbjct: 16 LGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL- 73
Query: 570 GFCDEALNRL-LVYEFMGNGTLANLIFAIPKPDWNLRVRISL---EIARGLVYLHEECNV 625
+ + +RL V E+ G L F + + R EI L YLH
Sbjct: 74 KYAFQTHDRLCFVMEYANGG---ELFFHLSRERVFTEERARFYGAEIVSALEYLHSR--- 127
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+++ DIK +N++LD KI+DFGL K +SD + T GT Y+APE ++
Sbjct: 128 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-GTPEYLAPEVLEDNDYG 186
Query: 686 AKVDVYSFGVMLLEIICCR 704
VD + GV++ E++C R
Sbjct: 187 RAVDWWGLGVVMYEMMCGR 205
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 133/295 (45%), Gaps = 46/295 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRT-HHKN 564
LG G+FG V G+ K +A+ AVK L A E++ + SE+ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFA--------------IPKPDWNLR--VRI 608
++ LLG C + ++ E+ G L + A +P+ + V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 609 SLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTM 666
+ ++ARG+ YL ++C IH D+ +N+L+ KI+DFGL++ + + D + T
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 667 IRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDC 726
R ++APE + + + DV+SFGV++ EI S I + +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS-------PYPGIPVEELFKL 271
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLL 781
EG D+PA + + M+ C PS+RPT K +++ L+ +L
Sbjct: 272 LKEGH-----RMDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR---LAQEREREFKSEVSAIGRTHHKNLVQLL 569
LG+G+FG V V + A+G+ A+K L + +A++ +E + + H L L
Sbjct: 159 LGKGTFGKVIL-VKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL- 216
Query: 570 GFCDEALNRL-LVYEFMGNGTLANLIFAIPKPDWNLRVRISL---EIARGLVYLHEECNV 625
+ + +RL V E+ G L F + + R EI L YLH E NV
Sbjct: 217 KYSFQTHDRLCFVMEYANGG---ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV 273
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
++ D+K +N++LD KI+DFGL K + D + T GT Y+APE ++
Sbjct: 274 --VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC-GTPEYLAPEVLEDNDYG 330
Query: 686 AKVDVYSFGVMLLEIICCR 704
VD + GV++ E++C R
Sbjct: 331 RAVDWWGLGVVMYEMMCGR 349
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR---LAQEREREFKSEVSAIGRTHHKNLVQLL 569
LG+G+FG V V + A+G+ A+K L + +A++ +E + + H L L
Sbjct: 156 LGKGTFGKVIL-VKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL- 213
Query: 570 GFCDEALNRL-LVYEFMGNGTLANLIFAIPKPDWNLRVRISL---EIARGLVYLHEECNV 625
+ + +RL V E+ G L F + + R EI L YLH E NV
Sbjct: 214 KYSFQTHDRLCFVMEYANGG---ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV 270
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
++ D+K +N++LD KI+DFGL K + D + T GT Y+APE ++
Sbjct: 271 --VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC-GTPEYLAPEVLEDNDYG 327
Query: 686 AKVDVYSFGVMLLEIICCR 704
VD + GV++ E++C R
Sbjct: 328 RAVDWWGLGVVMYEMMCGR 346
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTH---HKNLV 566
E+G G++G V+K G+ +A+K++ E + EV+ + H N+V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 567 QLLGFC-----DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRV--RISLEIARGLVYL 619
+L C D LV+E + + L + +P+P + ++ RGL +L
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 620 HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF 679
H ++H D+KPQNIL+ + K++DFGL+++ + T ++ T Y APE
Sbjct: 137 HSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVL 191
Query: 680 KNAPVSAKVDVYSFGVMLLEI 700
+ + VD++S G + E+
Sbjct: 192 LQSSYATPVDLWSVGCIFAEM 212
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 133/295 (45%), Gaps = 46/295 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRT-HHKN 564
LG G+FG V G+ K +A+ AVK L A E++ + SE+ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFA--------------IPKPDWNLR--VRI 608
++ LLG C + ++ E+ G L + A +P+ + V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 609 SLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTM 666
+ ++ARG+ YL ++C IH D+ +N+L+ KI+DFGL++ + + D + T
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 667 IRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDC 726
R ++APE + + + DV+SFGV++ EI S I + +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS-------PYPGIPVEELFKL 271
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLL 781
EG D+PA + + M+ C PS+RPT K +++ L+ +L
Sbjct: 272 LKEGH-----RMDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTH---HKNLV 566
E+G G++G V+K G+ +A+K++ E + EV+ + H N+V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 567 QLLGFC-----DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRV--RISLEIARGLVYL 619
+L C D LV+E + + L + +P+P + ++ RGL +L
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 620 HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF 679
H ++H D+KPQNIL+ + K++DFGL+++ + T ++ T Y APE
Sbjct: 137 HSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVL 191
Query: 680 KNAPVSAKVDVYSFGVMLLEI 700
+ + VD++S G + E+
Sbjct: 192 LQSSYATPVDLWSVGCIFAEM 212
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 26/203 (12%)
Query: 513 LGRGSFGIVYKGVLKSASG------------KAIAVKKLDRLAQEREREFKSEVSAIGRT 560
LG+GSFG V+ ++K SG K +K DR+ + ER+ EV+
Sbjct: 32 LGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN----- 84
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTL-ANLIFAIPKPDWNLRVRISLEIARGLVYL 619
H +V+L L+ +F+ G L L + + +++ ++ E+A L +L
Sbjct: 85 -HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALDHL 142
Query: 620 HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF 679
H ++ II+ D+KP+NILLD K++DFGLSK + + + ++ GT Y+APE
Sbjct: 143 H---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVV 198
Query: 680 KNAPVSAKVDVYSFGVMLLEIIC 702
+ D +SFGV++ E++
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLT 221
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 26/203 (12%)
Query: 513 LGRGSFGIVYKGVLKSASG------------KAIAVKKLDRLAQEREREFKSEVSAIGRT 560
LG+GSFG V+ ++K SG K +K DR+ + ER+ EV+
Sbjct: 33 LGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN----- 85
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTL-ANLIFAIPKPDWNLRVRISLEIARGLVYL 619
H +V+L L+ +F+ G L L + + +++ ++ E+A L +L
Sbjct: 86 -HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALDHL 143
Query: 620 HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF 679
H ++ II+ D+KP+NILLD K++DFGLSK + + + ++ GT Y+APE
Sbjct: 144 H---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVV 199
Query: 680 KNAPVSAKVDVYSFGVMLLEIIC 702
+ D +SFGV++ E++
Sbjct: 200 NRRGHTQSADWWSFGVLMFEMLT 222
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT---------HH 562
E+G G++G VYK SG +A+K + R+ +S + H
Sbjct: 16 EIGVGAYGTVYKA-RDPHSGHFVALKSV-RVPNGGGGGGGLPISTVREVALLRRLEAFEH 73
Query: 563 KNLVQLLGFC-----DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARG 615
N+V+L+ C D + LV+E + + L + P P L + RG
Sbjct: 74 PNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 132
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
L +LH C I+H D+KP+NIL+ + + K++DFGL+++ + T ++ T Y A
Sbjct: 133 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV--TLWYRA 187
Query: 676 PEWFKNAPVSAKVDVYSFGVMLLEI 700
PE + + VD++S G + E+
Sbjct: 188 PEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 89/197 (45%), Gaps = 18/197 (9%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVK-------KLDRLAQEREREFKSEVSAIGRTHHK 563
EELG G F +V K KS +G A K K R RE + + EVS + H
Sbjct: 17 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSRE-DIEREVSILKEIQHP 74
Query: 564 NLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
N++ L + + +L+ E + G L + + +I G+ YLH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 624 NVPIIHCDIKPQNI-LLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF 679
++ I H D+KP+NI LLD KI DFGL+ + D I GT +VAPE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPAFVAPEIV 189
Query: 680 KNAPVSAKVDVYSFGVM 696
P+ + D++S GV+
Sbjct: 190 NYEPLGLEADMWSIGVI 206
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 19/201 (9%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTH---HKNLV 566
E+G G++G VYK SG +A+K + E + EV+ + R H N+V
Sbjct: 11 EIGVGAYGTVYKA-RDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 567 QLLGFC-----DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVYL 619
+L+ C D + LV+E + + L + P P L + RGL +L
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 620 HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF 679
H C I+H D+KP+NIL+ + + K++DFGL+++ + ++ T Y APE
Sbjct: 129 HANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV--TLWYRAPEVL 183
Query: 680 KNAPVSAKVDVYSFGVMLLEI 700
+ + VD++S G + E+
Sbjct: 184 LQSTYATPVDMWSVGCIFAEM 204
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 16/199 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR---LAQEREREFKSEVSAIGRTHHKNLVQLL 569
LG+G+FG V V + A+G+ A+K L + +A++ +E + T H L L
Sbjct: 18 LGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL- 75
Query: 570 GFCDEALNRL-LVYEFMGNGTLANLIFAIPKPDWNLRVRISL---EIARGLVYLHEECNV 625
+ + +RL V E+ G L F + + R EI L YLH
Sbjct: 76 KYAFQTHDRLCFVMEYANGG---ELFFHLSRERVFTEERARFYGAEIVSALEYLHSR--- 129
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+++ DIK +N++LD KI+DFGL K +SD + T GT Y+APE ++
Sbjct: 130 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLEDNDYG 188
Query: 686 AKVDVYSFGVMLLEIICCR 704
VD + GV++ E++C R
Sbjct: 189 RAVDWWGLGVVMYEMMCGR 207
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 133/295 (45%), Gaps = 46/295 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRT-HHKN 564
LG G+FG V G+ K +A+ AVK L A E++ + SE+ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFA--------------IPKPDWNLR--VRI 608
++ LLG C + ++ E+ G L + A +P+ + V
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 609 SLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTM 666
+ ++ARG+ YL ++C IH D+ +N+L+ KI+DFGL++ + + D + T
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 667 IRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDC 726
R ++APE + + + DV+SFGV++ EI S I + +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS-------PYPGIPVEELFKL 271
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLL 781
EG D+PA + + M+ C PS+RPT K +++ L+ +L
Sbjct: 272 LKEGH-----RMDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 133/295 (45%), Gaps = 46/295 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRT-HHKN 564
LG G+FG V G+ K +A+ AVK L A E++ + SE+ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFA--------------IPKPDWNLR--VRI 608
++ LLG C + ++ E+ G L + A +P+ + V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 609 SLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTM 666
+ ++ARG+ YL ++C IH D+ +N+L+ KI+DFGL++ + + D + T
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 667 IRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDC 726
R ++APE + + + DV+SFGV++ EI S I + +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS-------PYPGIPVEELFKL 271
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLL 781
EG D+PA + + M+ C PS+RPT K +++ L+ +L
Sbjct: 272 LKEGH-----RMDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 16/199 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR---LAQEREREFKSEVSAIGRTHHKNLVQLL 569
LG+G+FG V V + A+G+ A+K L + +A++ +E + T H L L
Sbjct: 13 LGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL- 70
Query: 570 GFCDEALNRL-LVYEFMGNGTLANLIFAIPKPDWNLRVRISL---EIARGLVYLHEECNV 625
+ + +RL V E+ G L F + + R EI L YLH
Sbjct: 71 KYAFQTHDRLCFVMEYANGG---ELFFHLSRERVFTEERARFYGAEIVSALEYLHSR--- 124
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+++ DIK +N++LD KI+DFGL K +SD + T GT Y+APE ++
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLEDNDYG 183
Query: 686 AKVDVYSFGVMLLEIICCR 704
VD + GV++ E++C R
Sbjct: 184 RAVDWWGLGVVMYEMMCGR 202
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 126/298 (42%), Gaps = 65/298 (21%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHH---------- 562
LG+G+FG V K + + A+KK+ R +E+ SEV + +H
Sbjct: 14 LGQGAFGQVVKA-RNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 563 ---KNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRV----RISLEIARG 615
+N V+ + + + E+ NGTL +LI + + N + R+ +I
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS---ENLNQQRDEYWRLFRQILEA 128
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK--------LLLSDQ-----SR 662
L Y+H + IIH D+KP NI +D + KI DFGL+K L L Q S
Sbjct: 129 LSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 663 THTMIRGTRGYVAPEWFK-NAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTD 721
T GT YVA E + K+D+YS G++ E+I S ME
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP-FSTGME----------- 233
Query: 722 WAYDCYAEGRLDVL-----VDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVL 774
R+++L V + P D ++++ I I DP+KRP + +L
Sbjct: 234 ---------RVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERER------EFKSEVSAIGRTHHKN 564
EELG G F +V K KS +G A K + + + R + + EVS + H N
Sbjct: 16 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
++ L + + +L+ E + G L + + +I G+ YLH +
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---S 131
Query: 625 VPIIHCDIKPQNI-LLDNYFSA---KISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ I H D+KP+NI LLD KI DFGL+ + D I GT +VAPE
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVN 189
Query: 681 NAPVSAKVDVYSFGVM 696
P+ + D++S GV+
Sbjct: 190 YEPLGLEADMWSIGVI 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 16/199 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR---LAQEREREFKSEVSAIGRTHHKNLVQLL 569
LG+G+FG V V + A+G+ A+K L + +A++ +E + T H L L
Sbjct: 13 LGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL- 70
Query: 570 GFCDEALNRL-LVYEFMGNGTLANLIFAIPKPDWNLRVRISL---EIARGLVYLHEECNV 625
+ + +RL V E+ G L F + + R EI L YLH
Sbjct: 71 KYAFQTHDRLCFVMEYANGG---ELFFHLSRERVFTEERARFYGAEIVSALEYLHSR--- 124
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+++ DIK +N++LD KI+DFGL K +SD + T GT Y+APE ++
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLEDNDYG 183
Query: 686 AKVDVYSFGVMLLEIICCR 704
VD + GV++ E++C R
Sbjct: 184 RAVDWWGLGVVMYEMMCGR 202
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 16/192 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQLL 569
LG+GSFG V K + + AVK +++ A + ++ + EV + + H N+++L
Sbjct: 30 LGKGSFGEVLK-CKDRITQQEYAVKVINK-ASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
+++ + +V E G L + I + + RI ++ G+ Y+H+ I+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVH 144
Query: 630 CDIKPQNILLDNYFS---AKISDFGLSKLLLSDQSRTHTMIR-GTRGYVAPEWFKNAPVS 685
D+KP+NILL++ KI DFGLS Q T R GT Y+APE +
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPEVLR-GTYD 200
Query: 686 AKVDVYSFGVML 697
K DV+S GV+L
Sbjct: 201 EKCDVWSAGVIL 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERER------EFKSEVSAIGRTHHKN 564
EELG G F +V K KS +G A K + + + R + + EVS + H N
Sbjct: 16 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
++ L + + +L+ E + G L + + +I G+ YLH +
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---S 131
Query: 625 VPIIHCDIKPQNI-LLDNYFSA---KISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ I H D+KP+NI LLD KI DFGL+ + D I GT +VAPE
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVN 189
Query: 681 NAPVSAKVDVYSFGVM 696
P+ + D++S GV+
Sbjct: 190 YEPLGLEADMWSIGVI 205
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 119/276 (43%), Gaps = 32/276 (11%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVK-------KLDRLAQEREREFKSEVSAIGRTHHK 563
EELG G F +V K KS +G A K K R RE + + EVS + H
Sbjct: 17 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSRE-DIEREVSILKEIQHP 74
Query: 564 NLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
N++ L + + +L+ E + G L + + +I G+ YLH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 624 NVPIIHCDIKPQNI-LLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF 679
++ I H D+KP+NI LLD KI DFGL+ + D I GT +VAPE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIV 189
Query: 680 KNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSD 739
P+ + D++S GV+ ++ + ++E A ++ Y+ +
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF------------E 237
Query: 740 EPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
+ ++ S L K + + +DP KR T++ LQ
Sbjct: 238 DEYFSNTSALAKDFIRRLLV--KDPKKRMTIQDSLQ 271
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 19/201 (9%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTH---HKNLV 566
E+G G++G VYK SG +A+K + E + EV+ + R H N+V
Sbjct: 11 EIGVGAYGTVYKA-RDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 567 QLLGFC-----DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVYL 619
+L+ C D + LV+E + + L + P P L + RGL +L
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 620 HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF 679
H C I+H D+KP+NIL+ + + K++DFGL+++ + ++ T Y APE
Sbjct: 129 HANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV--TLWYRAPEVL 183
Query: 680 KNAPVSAKVDVYSFGVMLLEI 700
+ + VD++S G + E+
Sbjct: 184 LQSTYATPVDMWSVGCIFAEM 204
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 8/198 (4%)
Query: 509 FKEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLV 566
F + LG GSF +V L ++ AI + + + +E + + + E + R H V
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+L + + NG L I I D + EI L YLH +
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--- 153
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIH D+KP+NILL+ +I+DFG +K+L S Q+R ++ + GT YV+PE
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKSA 212
Query: 685 SAKVDVYSFGVMLLEIIC 702
D+++ G ++ +++
Sbjct: 213 CKSSDLWALGCIIYQLVA 230
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 102/197 (51%), Gaps = 15/197 (7%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE---REFKSEVSAIGRTHHKNLVQ 567
E++G G++G+VYK ++ G+ A+KK+ RL +E E E+S + H N+V+
Sbjct: 8 EKIGEGTYGVVYKA--QNNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVR-ISLEIARGLVYLHEECNVP 626
L +LV+E + + L L+ ++ + L++ G+ Y H+
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---R 120
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNA-PV 684
++H D+KPQN+L++ KI+DFGL++ + + TH ++ T Y AP+ +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV--TLWYRAPDVLMGSKKY 178
Query: 685 SAKVDVYSFGVMLLEII 701
S +D++S G + E++
Sbjct: 179 STTIDIWSVGCIFAEMV 195
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 14/191 (7%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE--REFKSEVSAIGRTHHKNLVQLLG 570
LG+GSFG V K + + AVK +++ + + + EV + + H N+++L
Sbjct: 30 LGKGSFGEVLK-CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 571 FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHC 630
+++ + +V E G L + I + + RI ++ G+ Y+H+ I+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHR 145
Query: 631 DIKPQNILLDNY---FSAKISDFGLSKLLLSDQSRTHTMIR-GTRGYVAPEWFKNAPVSA 686
D+KP+NILL++ KI DFGLS Q T R GT Y+APE +
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPEVLRGT-YDE 201
Query: 687 KVDVYSFGVML 697
K DV+S GV+L
Sbjct: 202 KCDVWSAGVIL 212
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERER------EFKSEVSAIGRTHHKN 564
EELG G F +V K KS +G A K + + + R + + EVS + H N
Sbjct: 17 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
++ L + + +L+ E + G L + + +I G+ YLH +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---S 132
Query: 625 VPIIHCDIKPQNI-LLDNYFSA---KISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ I H D+KP+NI LLD KI DFGL+ + D I GT +VAPE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVN 190
Query: 681 NAPVSAKVDVYSFGVM 696
P+ + D++S GV+
Sbjct: 191 YEPLGLEADMWSIGVI 206
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 133/295 (45%), Gaps = 46/295 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRT-HHKN 564
LG G+FG V G+ K +A+ AVK L A E++ + SE+ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFA--------------IPKPDWNLR--VRI 608
++ LLG C + ++ E+ G L + A +P+ + V
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 609 SLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTM 666
+ ++ARG+ YL ++C IH D+ +N+L+ KI+DFGL++ + + D + T
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 667 IRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDC 726
R ++APE + + + DV+SFGV++ EI S I + +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS-------PYPGIPVEELFKL 271
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLL 781
EG D+PA + + M+ C PS+RPT K +++ L+ +L
Sbjct: 272 LKEGH-----RMDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 102/197 (51%), Gaps = 15/197 (7%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE---REFKSEVSAIGRTHHKNLVQ 567
E++G G++G+VYK ++ G+ A+KK+ RL +E E E+S + H N+V+
Sbjct: 8 EKIGEGTYGVVYKA--QNNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVR-ISLEIARGLVYLHEECNVP 626
L +LV+E + + L L+ ++ + L++ G+ Y H+
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---R 120
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNA-PV 684
++H D+KPQN+L++ KI+DFGL++ + + TH ++ T Y AP+ +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRAPDVLMGSKKY 178
Query: 685 SAKVDVYSFGVMLLEII 701
S +D++S G + E++
Sbjct: 179 STTIDIWSVGCIFAEMV 195
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERER------EFKSEVSAIGRTHHKN 564
EELG G F +V K KS +G A K + + + R + + EVS + H N
Sbjct: 17 EELGSGKFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
++ L + + +L+ E + G L + + +I G+ YLH +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---S 132
Query: 625 VPIIHCDIKPQNI-LLDNYFSA---KISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ I H D+KP+NI LLD KI DFGL+ + D I GT +VAPE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVN 190
Query: 681 NAPVSAKVDVYSFGVM 696
P+ + D++S GV+
Sbjct: 191 YEPLGLEADMWSIGVI 206
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 102/197 (51%), Gaps = 15/197 (7%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE---REFKSEVSAIGRTHHKNLVQ 567
E++G G++G+VYK ++ G+ A+KK+ RL +E E E+S + H N+V+
Sbjct: 8 EKIGEGTYGVVYKA--QNNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVR-ISLEIARGLVYLHEECNVP 626
L +LV+E + + L L+ ++ + L++ G+ Y H+
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---R 120
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWFKNA-PV 684
++H D+KPQN+L++ KI+DFGL++ + + TH ++ T Y AP+ +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRAPDVLMGSKKY 178
Query: 685 SAKVDVYSFGVMLLEII 701
S +D++S G + E++
Sbjct: 179 STTIDIWSVGCIFAEMV 195
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 16/199 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR---LAQEREREFKSEVSAIGRTHHKNLVQLL 569
LG+G+FG V V + A+G+ A+K L + +A++ +E + T H L L
Sbjct: 13 LGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL- 70
Query: 570 GFCDEALNRL-LVYEFMGNGTLANLIFAIPKPDWNLRVRISL---EIARGLVYLHEECNV 625
+ + +RL V E+ G L F + + R EI L YLH
Sbjct: 71 KYAFQTHDRLCFVMEYANGG---ELFFHLSRERVFTEERARFYGAEIVSALEYLHSR--- 124
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+++ DIK +N++LD KI+DFGL K +SD + T GT Y+APE ++
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLEDNDYG 183
Query: 686 AKVDVYSFGVMLLEIICCR 704
VD + GV++ E++C R
Sbjct: 184 RAVDWWGLGVVMYEMMCGR 202
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 18/196 (9%)
Query: 511 EELGRGSFGIVYKGVLKSAS----GKAIAVKKLD-RLAQEREREFKSEVSAIGRT-HHKN 564
EELG+G+F +V + V K+ + K I KKL R Q+ ERE + I R H N
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREAR-----ICRLLKHPN 91
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
+V+L E LV++ + G L I A +I + ++H+
Sbjct: 92 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQH-- 149
Query: 625 VPIIHCDIKPQNILLDNY---FSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
I+H D+KP+N+LL + + K++DFGL+ + + + + GT GY++PE +
Sbjct: 150 -DIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLSPEVLRK 207
Query: 682 APVSAKVDVYSFGVML 697
P VD+++ GV+L
Sbjct: 208 DPYGKPVDIWACGVIL 223
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 15/220 (6%)
Query: 489 TSETNLRFFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDR---LAQE 545
+ + NL S K + F + +G+GSFG V K A AVK L + L ++
Sbjct: 22 SQQINLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHK-AEEVFYAVKVLQKKAILKKK 80
Query: 546 REREFKSEVSAIGRTHHKNLVQLLGFCDEALNRL-LVYEFMGNGTLANLIFAIPKPDWNL 604
E+ SE + + + + L F + ++L V +++ G L + + + L
Sbjct: 81 EEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG---ELFYHLQRERCFL 137
Query: 605 RVRI---SLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQS 661
R + EIA L YLH ++ I++ D+KP+NILLD+ ++DFGL K + S
Sbjct: 138 EPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS 194
Query: 662 RTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEII 701
T T GT Y+APE P VD + G +L E++
Sbjct: 195 TTSTFC-GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 35/212 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREF-----------------KSEVS 555
L +G F K +L K A+KK ++ E++R+F K+E+
Sbjct: 39 LNQGKFN---KIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQ 95
Query: 556 AIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARG 615
I ++ + G ++YE+M N ++ D N I +++ +
Sbjct: 96 IITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKC 155
Query: 616 LV--------YLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMI 667
++ Y+H E N I H D+KP NIL+D K+SDFG S+ ++ + +
Sbjct: 156 IIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGS--- 210
Query: 668 RGTRGYVAPEWFKNAPV--SAKVDVYSFGVML 697
RGT ++ PE+F N AKVD++S G+ L
Sbjct: 211 RGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 14/191 (7%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE--REFKSEVSAIGRTHHKNLVQLLG 570
LG+GSFG V K + + AVK +++ + + + EV + + H N+++L
Sbjct: 30 LGKGSFGEVLK-CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 571 FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHC 630
+++ + +V E G L + I + + RI ++ G+ Y+H+ I+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHR 145
Query: 631 DIKPQNILLDNY---FSAKISDFGLSKLLLSDQSRTHTMIR-GTRGYVAPEWFKNAPVSA 686
D+KP+NILL++ KI DFGLS Q T R GT Y+APE +
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPEVLRGT-YDE 201
Query: 687 KVDVYSFGVML 697
K DV+S GV+L
Sbjct: 202 KCDVWSAGVIL 212
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 46/295 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAI--AVKKL-DRLAQEREREFKSEVSAIGRT-HHKN 564
LG G+FG V G+ K +A+ AVK L D +E + SE+ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFA--------------IPKPDWNLR--VRI 608
++ LLG C + ++ E+ G L + A +P+ + V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 609 SLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTM 666
+ ++ARG+ YL ++C IH D+ +N+L+ KI+DFGL++ + + D + T
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 667 IRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDC 726
R ++APE + + + DV+SFGV++ EI S I + +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS-------PYPGIPVEELFKL 271
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLL 781
EG D+PA + + M+ C PS+RPT K +++ L+ +L
Sbjct: 272 LKEGH-----RMDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 89/197 (45%), Gaps = 18/197 (9%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVK-------KLDRLAQEREREFKSEVSAIGRTHHK 563
EELG G F +V K KS +G A K K R RE + + EVS + H
Sbjct: 17 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSRE-DIEREVSILKEIQHP 74
Query: 564 NLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
N++ L + + +L+ E + G L + + +I G+ YLH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 624 NVPIIHCDIKPQNI-LLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF 679
++ I H D+KP+NI LLD KI DFGL+ + D I GT +VAPE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIV 189
Query: 680 KNAPVSAKVDVYSFGVM 696
P+ + D++S GV+
Sbjct: 190 NYEPLGLEADMWSIGVI 206
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERER------EFKSEVSAIGRTHHKN 564
EELG G F +V K KS +G A K + + + R + + EVS + H N
Sbjct: 17 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
++ L + + +L+ E + G L + + +I G+ YLH +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---S 132
Query: 625 VPIIHCDIKPQNI-LLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ I H D+KP+NI LLD KI DFGL+ + D I GT +VAPE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVN 190
Query: 681 NAPVSAKVDVYSFGVM 696
P+ + D++S GV+
Sbjct: 191 YEPLGLEADMWSIGVI 206
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 14/224 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIA--VKKLDRLAQER---EREFKSEVSAIGRTHHKNL 565
EELG G F IV K KS + A +KK A R E + EVS + + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNV 625
+ L + + +L+ E + G L + + +I G+ YLH +
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK--- 134
Query: 626 PIIHCDIKPQNI-LLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
I H D+KP+NI LLD K+ DFGL+ + + I GT +VAPE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIVNY 192
Query: 682 APVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYD 725
P+ + D++S GV+ ++ + ++E A +T +YD
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 20/200 (10%)
Query: 513 LGRGSFGIVY--KGVLKSASGKAIAVKKLDRLAQERERE----FKSEVSAIGRTHHKNLV 566
LG+G +G V+ + V + +GK A+K L + R + K+E + + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 567 QLLGFCDEALNRLLVYEFMGNGTL-----ANLIFAIPKPDWNLRVRISLEIARGLVYLHE 621
L+ L+ E++ G L IF + L EI+ L +LH+
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA-----EISMALGHLHQ 139
Query: 622 ECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
+ II+ D+KP+NI+L++ K++DFGL K + D + THT GT Y+APE
Sbjct: 140 KG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFC-GTIEYMAPEILMR 195
Query: 682 APVSAKVDVYSFGVMLLEII 701
+ + VD +S G ++ +++
Sbjct: 196 SGHNRAVDWWSLGALMYDML 215
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 509 FKEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLV 566
F + LG GSF +V L ++ AI + + + +E + + + E + R H V
Sbjct: 14 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 73
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+L + + NG L I I D + EI L YLH +
Sbjct: 74 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--- 130
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIH D+KP+NILL+ +I+DFG +K+L S Q+R + + GT YV+PE
Sbjct: 131 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 189
Query: 685 SAKVDVYSFGVMLLEIIC 702
D+++ G ++ +++
Sbjct: 190 CKSSDLWALGCIIYQLVA 207
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERER------EFKSEVSAIGRTHHKN 564
EELG G F +V K KS +G A K + + + R + + EVS + H N
Sbjct: 17 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
++ L + + +L+ E + G L + + +I G+ YLH +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---S 132
Query: 625 VPIIHCDIKPQNI-LLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ I H D+KP+NI LLD KI DFGL+ + D I GT +VAPE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVN 190
Query: 681 NAPVSAKVDVYSFGVM 696
P+ + D++S GV+
Sbjct: 191 YEPLGLEADMWSIGVI 206
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERER------EFKSEVSAIGRTHHKN 564
EELG G F +V K KS +G A K + + + R + + EVS + H N
Sbjct: 17 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
++ L + + +L+ E + G L + + +I G+ YLH +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---S 132
Query: 625 VPIIHCDIKPQNI-LLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ I H D+KP+NI LLD KI DFGL+ + D I GT +VAPE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVN 190
Query: 681 NAPVSAKVDVYSFGVM 696
P+ + D++S GV+
Sbjct: 191 YEPLGLEADMWSIGVI 206
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERER------EFKSEVSAIGRTHHKN 564
EELG G F +V K KS +G A K + + + R + + EVS + H N
Sbjct: 17 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
++ L + + +L+ E + G L + + +I G+ YLH +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---S 132
Query: 625 VPIIHCDIKPQNI-LLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ I H D+KP+NI LLD KI DFGL+ + D I GT +VAPE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVN 190
Query: 681 NAPVSAKVDVYSFGVM 696
P+ + D++S GV+
Sbjct: 191 YEPLGLEADMWSIGVI 206
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERER------EFKSEVSAIGRTHHKN 564
EELG G F +V K KS +G A K + + + R + + EVS + H N
Sbjct: 17 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
++ L + + +L+ E + G L + + +I G+ YLH +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---S 132
Query: 625 VPIIHCDIKPQNI-LLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ I H D+KP+NI LLD KI DFGL+ + D I GT +VAPE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVN 190
Query: 681 NAPVSAKVDVYSFGVM 696
P+ + D++S GV+
Sbjct: 191 YEPLGLEADMWSIGVI 206
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 509 FKEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLV 566
F + LG GSF +V L ++ AI + + + +E + + + E + R H V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+L + + NG L I I D + EI L YLH +
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--- 150
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIH D+KP+NILL+ +I+DFG +K+L S Q+R + + GT YV+PE
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV-GTAQYVSPELLTEKSA 209
Query: 685 SAKVDVYSFGVMLLEIIC 702
D+++ G ++ +++
Sbjct: 210 CKSSDLWALGCIIYQLVA 227
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 14/224 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIA--VKKLDRLAQER---EREFKSEVSAIGRTHHKNL 565
EELG G F IV K KS + A +KK A R E + EVS + + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNV 625
+ L + + +L+ E + G L + + +I G+ YLH +
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK--- 134
Query: 626 PIIHCDIKPQNI-LLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
I H D+KP+NI LLD K+ DFGL+ + + I GT +VAPE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIVNY 192
Query: 682 APVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYD 725
P+ + D++S GV+ ++ + ++E A +T +YD
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 8/198 (4%)
Query: 509 FKEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLV 566
F + LG GSF +V L ++ AI + + + +E + + + E + R H V
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+L + + NG L I I D + EI L YLH +
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--- 149
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIH D+KP+NILL+ +I+DFG +K+L S Q+R ++ + GT YV+PE
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKSA 208
Query: 685 SAKVDVYSFGVMLLEIIC 702
D+++ G ++ +++
Sbjct: 209 CKSSDLWALGCIIYQLVA 226
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 509 FKEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLV 566
F + LG GSF +V L ++ AI + + + +E + + + E + R H V
Sbjct: 13 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 72
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+L + + NG L I I D + EI L YLH +
Sbjct: 73 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--- 129
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIH D+KP+NILL+ +I+DFG +K+L S Q+R + + GT YV+PE
Sbjct: 130 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 188
Query: 685 SAKVDVYSFGVMLLEIIC 702
D+++ G ++ +++
Sbjct: 189 CKSSDLWALGCIIYQLVA 206
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 509 FKEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLV 566
F + LG GSF +V L ++ AI + + + +E + + + E + R H V
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+L + + NG L I I D + EI L YLH +
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--- 153
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIH D+KP+NILL+ +I+DFG +K+L S Q+R + + GT YV+PE
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 212
Query: 685 SAKVDVYSFGVMLLEIIC 702
D+++ G ++ +++
Sbjct: 213 CKSSDLWALGCIIYQLVA 230
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 14/224 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIA--VKKLDRLAQER---EREFKSEVSAIGRTHHKNL 565
EELG G F IV K KS + A +KK A R E + EVS + + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNV 625
+ L + + +L+ E + G L + + +I G+ YLH +
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK--- 134
Query: 626 PIIHCDIKPQNI-LLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
I H D+KP+NI LLD K+ DFGL+ + + I GT +VAPE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIVNY 192
Query: 682 APVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYD 725
P+ + D++S GV+ ++ + ++E A +T +YD
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR---LAQEREREFKSEVSAIGRTHHKNLVQLL 569
LG+G+FG V V + A+G+ A+K L + +A++ +E + + H L L
Sbjct: 18 LGKGTFGKVIL-VKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL- 75
Query: 570 GFCDEALNRL-LVYEFMGNGTLANLIFAIPKPDWNLRVRISL---EIARGLVYLHEECNV 625
+ + +RL V E+ G L F + + R EI L YLH E NV
Sbjct: 76 KYSFQTHDRLCFVMEYANGG---ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV 132
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
++ D+K +N++LD KI+DFGL K + D + T GT Y+APE ++
Sbjct: 133 --VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAPEVLEDNDYG 189
Query: 686 AKVDVYSFGVMLLEIICCR 704
VD + GV++ E++C R
Sbjct: 190 RAVDWWGLGVVMYEMMCGR 208
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 509 FKEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLV 566
F + LG GSF +V L ++ AI + + + +E + + + E + R H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+L + + NG L I I D + EI L YLH +
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--- 152
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIH D+KP+NILL+ +I+DFG +K+L S Q+R + + GT YV+PE
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 211
Query: 685 SAKVDVYSFGVMLLEIIC 702
D+++ G ++ +++
Sbjct: 212 XKSSDLWALGCIIYQLVA 229
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 23/201 (11%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE------REFKSEVSAIGRTHHKNLV 566
LG G F VYK K+ + + +A+KK+ +L E R E+ + H N++
Sbjct: 18 LGEGQFATVYKARDKN-TNQIVAIKKI-KLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLA----NLIFAIPKPDWNLRVRISLEIARGLVYLHEE 622
LL N LV++FM N + P +++ + + + +GL YLH+
Sbjct: 76 GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPS---HIKAYMLMTL-QGLEYLHQH 131
Query: 623 CNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTMIRGTRGYVAPEWFKN 681
I+H D+KP N+LLD K++DFGL+K S +++ H ++ TR Y APE
Sbjct: 132 W---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV--TRWYRAPELLFG 186
Query: 682 APV-SAKVDVYSFGVMLLEII 701
A + VD+++ G +L E++
Sbjct: 187 ARMYGVGVDMWAVGCILAELL 207
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 46/295 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRT-HHKN 564
LG G FG V G+ K +A+ AVK L A E++ + SE+ + HKN
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFA--------------IPKPDWNLR--VRI 608
++ LLG C + ++ E+ G L + A +P+ + V
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 609 SLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTM 666
+ ++ARG+ YL ++C IH D+ +N+L+ KI+DFGL++ + + D + T
Sbjct: 155 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 667 IRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDC 726
R ++APE + + + DV+SFGV++ EI S I + +
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS-------PYPGIPVEELFKL 263
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLL 781
EG D+PA + + M+ C PS+RPT K +++ L+ +L
Sbjct: 264 LKEGH-----RMDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 309
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERER------EFKSEVSAIGRTHHKN 564
EELG G F +V K KS +G A K + + + R + + EVS + H N
Sbjct: 17 EELGSGVFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
++ L + + +L+ E + G L + + +I G+ YLH +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---S 132
Query: 625 VPIIHCDIKPQNI-LLDNYFSA---KISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ I H D+KP+NI LLD KI DFGL+ + D I GT +VAPE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVN 190
Query: 681 NAPVSAKVDVYSFGVM 696
P+ + D++S GV+
Sbjct: 191 YEPLGLEADMWSIGVI 206
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR---LAQEREREFKSEVSAIGRTHHKNLVQLL 569
LG+G+FG V V + A+G+ A+K L + +A++ +E + + H L L
Sbjct: 16 LGKGTFGKVIL-VKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL- 73
Query: 570 GFCDEALNRL-LVYEFMGNGTLANLIFAIPKPDWNLRVRISL---EIARGLVYLHEECNV 625
+ + +RL V E+ G L F + + R EI L YLH E NV
Sbjct: 74 KYSFQTHDRLCFVMEYANGG---ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV 130
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
++ D+K +N++LD KI+DFGL K + D + T GT Y+APE ++
Sbjct: 131 --VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAPEVLEDNDYG 187
Query: 686 AKVDVYSFGVMLLEIICCR 704
VD + GV++ E++C R
Sbjct: 188 RAVDWWGLGVVMYEMMCGR 206
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 124/278 (44%), Gaps = 39/278 (14%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRL--AQEREREFKSEVSAIGRTHHKNLVQLL 569
ELGRG++G+V K + SG+ +AVK++ +QE++R ++ V
Sbjct: 58 ELGRGAYGVVEK-MRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 116
Query: 570 GFCDEALNRLLVYEFMGNG------TLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
G + + E M + + IP+ ++ +I++ I + L +LH +
Sbjct: 117 GALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPE---DILGKIAVSIVKALEHLHSKL 173
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE----WF 679
+V IH D+KP N+L++ K+ DFG+S L+ S T+ G + Y+APE
Sbjct: 174 SV--IHRDVKPSNVLINALGQVKMCDFGISGYLVD--SVAKTIDAGCKPYMAPERINPEL 229
Query: 680 KNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAE--GRLDVLVD 737
S K D++S G+ ++E+ R + YD + +L +V+
Sbjct: 230 NQKGYSVKSDIWSLGITMIELAILR-----------------FPYDSWGTPFQQLKQVVE 272
Query: 738 SDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
P + +++ C++++ +RPT ++Q
Sbjct: 273 EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 509 FKEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLV 566
F + LG GSF +V L ++ AI + + + +E + + + E + R H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+L + + NG L I I D + EI L YLH +
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--- 152
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIH D+KP+NILL+ +I+DFG +K+L S Q+R + + GT YV+PE
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 211
Query: 685 SAKVDVYSFGVMLLEIIC 702
D+++ G ++ +++
Sbjct: 212 CKSSDLWALGCIIYQLVA 229
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 14/224 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIA--VKKLDRLAQER---EREFKSEVSAIGRTHHKNL 565
EELG G F IV K KS + A +KK A R E + EVS + + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNV 625
+ L + + +L+ E + G L + + +I G+ YLH +
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK--- 134
Query: 626 PIIHCDIKPQNI-LLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
I H D+KP+NI LLD K+ DFGL+ + + I GT +VAPE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIVNY 192
Query: 682 APVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYD 725
P+ + D++S GV+ ++ + ++E A +T +YD
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 14/224 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIA--VKKLDRLAQER---EREFKSEVSAIGRTHHKNL 565
EELG G F IV K KS + A +KK A R E + EVS + + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNV 625
+ L + + +L+ E + G L + + +I G+ YLH +
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK--- 134
Query: 626 PIIHCDIKPQNI-LLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
I H D+KP+NI LLD K+ DFGL+ + + I GT +VAPE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIVNY 192
Query: 682 APVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYD 725
P+ + D++S GV+ ++ + ++E A +T +YD
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 46/295 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRT-HHKN 564
LG G FG V G+ K +A+ AVK L A E++ + SE+ + HKN
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFA--------------IPKPDWNLR--VRI 608
++ LLG C + ++ E+ G L + A +P+ + V
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 609 SLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTM 666
+ ++ARG+ YL ++C IH D+ +N+L+ KI+DFGL++ + + D + T
Sbjct: 150 TYQLARGMEYLASQKC----IHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 667 IRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDC 726
R ++APE + + + DV+SFGV++ EI S I + +
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS-------PYPGIPVEELFKL 258
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLL 781
EG D+PA + + M+ C PS+RPT K +++ L+ +L
Sbjct: 259 LKEGH-----RMDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 304
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 509 FKEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLV 566
F + LG GSF +V L ++ AI + + + +E + + + E + R H V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+L + + NG L I I D + EI L YLH +
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--- 150
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIH D+KP+NILL+ +I+DFG +K+L S Q+R + + GT YV+PE
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 209
Query: 685 SAKVDVYSFGVMLLEIIC 702
D+++ G ++ +++
Sbjct: 210 CKSSDLWALGCIIYQLVA 227
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 509 FKEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLV 566
F + LG GSF +V L ++ AI + + + +E + + + E + R H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+L + + NG L I I D + EI L YLH +
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--- 152
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIH D+KP+NILL+ +I+DFG +K+L S Q+R + + GT YV+PE
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 211
Query: 685 SAKVDVYSFGVMLLEIIC 702
D+++ G ++ +++
Sbjct: 212 CKSSDLWALGCIIYQLVA 229
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR---LAQEREREFKSEVSAIGRTHHKNLVQLL 569
LG+G+FG V V + A+G+ A+K L + +A++ +E + + H L L
Sbjct: 17 LGKGTFGKVIL-VKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL- 74
Query: 570 GFCDEALNRL-LVYEFMGNGTLANLIFAIPKPDWNLRVRISL---EIARGLVYLHEECNV 625
+ + +RL V E+ G L F + + R EI L YLH E NV
Sbjct: 75 KYSFQTHDRLCFVMEYANGG---ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV 131
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
++ D+K +N++LD KI+DFGL K + D + T GT Y+APE ++
Sbjct: 132 --VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAPEVLEDNDYG 188
Query: 686 AKVDVYSFGVMLLEIICCR 704
VD + GV++ E++C R
Sbjct: 189 RAVDWWGLGVVMYEMMCGR 207
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 509 FKEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLV 566
F + LG GSF +V L ++ AI + + + +E + + + E + R H V
Sbjct: 11 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 70
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+L + + NG L I I D + EI L YLH +
Sbjct: 71 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--- 127
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIH D+KP+NILL+ +I+DFG +K+L S Q+R + + GT YV+PE
Sbjct: 128 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 186
Query: 685 SAKVDVYSFGVMLLEIIC 702
D+++ G ++ +++
Sbjct: 187 CKSSDLWALGCIIYQLVA 204
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 509 FKEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLV 566
F + LG GSF +V L ++ AI + + + +E + + + E + R H V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+L + + NG L I I D + EI L YLH +
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--- 150
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIH D+KP+NILL+ +I+DFG +K+L S Q+R + + GT YV+PE
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 209
Query: 685 SAKVDVYSFGVMLLEIIC 702
D+++ G ++ +++
Sbjct: 210 CKSSDLWALGCIIYQLVA 227
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 133/295 (45%), Gaps = 46/295 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRT-HHKN 564
LG G+FG V G+ K +A+ AVK L A E++ + SE+ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFA--------------IPKPDWNLR--VRI 608
++ LLG C + ++ E+ G L + A +P+ + V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 609 SLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTM 666
+ ++ARG+ YL ++C IH D+ +N+L+ +I+DFGL++ + + D + T
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 667 IRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDC 726
R ++APE + + + DV+SFGV++ EI S I + +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS-------PYPGIPVEELFKL 271
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLL 781
EG D+PA + + M+ C PS+RPT K +++ L+ +L
Sbjct: 272 LKEGH-----RMDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 46/295 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRT-HHKN 564
LG G FG V G+ K +A+ AVK L A E++ + SE+ + HKN
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFA--------------IPKPDWNLR--VRI 608
++ LLG C + ++ E+ G L + A +P+ + V
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 609 SLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTM 666
+ ++ARG+ YL ++C IH D+ +N+L+ KI+DFGL++ + + D + T
Sbjct: 152 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 667 IRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDC 726
R ++APE + + + DV+SFGV++ EI S I + +
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS-------PYPGIPVEELFKL 260
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLL 781
EG D+PA + + M+ C PS+RPT K +++ L+ +L
Sbjct: 261 LKEGH-----RMDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 306
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 509 FKEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLV 566
F + LG GSF +V L ++ AI + + + +E + + + E + R H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+L + + NG L I I D + EI L YLH +
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--- 152
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIH D+KP+NILL+ +I+DFG +K+L S Q+R + + GT YV+PE
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 211
Query: 685 SAKVDVYSFGVMLLEIIC 702
D+++ G ++ +++
Sbjct: 212 CKSSDLWALGCIIYQLVA 229
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNL 565
+E LG GSFG V K + + +A+K + R ++ + E+S + H ++
Sbjct: 13 IRETLGEGSFGKV-KLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHI 71
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNV 625
++L + ++V E+ G G L + I + + R +I + Y H
Sbjct: 72 IKLYDVITTPTDIVMVIEYAG-GELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH--- 127
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
I+H D+KP+N+LLD+ + KI+DFGLS +++D + T G+ Y APE +
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSN-IMTDGNFLKTSC-GSPNYAAPEVINGKLYA 185
Query: 686 A-KVDVYSFGVMLLEIICCR 704
+VDV+S G++L ++ R
Sbjct: 186 GPEVDVWSCGIVLYVMLVGR 205
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 509 FKEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLV 566
F + LG GSF +V L ++ AI + + + +E + + + E + R H V
Sbjct: 39 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 98
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+L + + NG L I I D + EI L YLH +
Sbjct: 99 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--- 155
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIH D+KP+NILL+ +I+DFG +K+L S Q+R + + GT YV+PE
Sbjct: 156 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 214
Query: 685 SAKVDVYSFGVMLLEIIC 702
D+++ G ++ +++
Sbjct: 215 CKSSDLWALGCIIYQLVA 232
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 10/193 (5%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE---REFKSEVSAIGRTHHKNLVQLL 569
LG+G FG VY K S +A+K L + E+E + + E+ HH N+++L
Sbjct: 31 LGKGKFGNVYLAREKK-SHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLY 89
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
+ + L+ E+ G L + D I E+A L+Y H + +IH
Sbjct: 90 NYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK---KVIH 146
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
DIKP+N+LL KI+DFG S + + R TM GT Y+ PE + + KVD
Sbjct: 147 RDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMC-GTLDYLPPEMIEGRMHNEKVD 203
Query: 690 VYSFGVMLLEIIC 702
++ GV+ E++
Sbjct: 204 LWCIGVLCYELLV 216
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 509 FKEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLV 566
F + LG GSF +V L ++ AI + + + +E + + + E + R H V
Sbjct: 12 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 71
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+L + + NG L I I D + EI L YLH +
Sbjct: 72 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--- 128
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIH D+KP+NILL+ +I+DFG +K+L S Q+R + + GT YV+PE
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 187
Query: 685 SAKVDVYSFGVMLLEIIC 702
D+++ G ++ +++
Sbjct: 188 CKSSDLWALGCIIYQLVA 205
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERER------EFKSEVSAIGRTHHKN 564
EELG G F +V K KS +G A K + + + R + + EVS + H N
Sbjct: 17 EELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
++ L + + +L+ E + G L + + +I G+ YLH +
Sbjct: 76 VITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---S 132
Query: 625 VPIIHCDIKPQNI-LLDNYFSA---KISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ I H D+KP+NI LLD KI DFGL+ + D I GT +VAPE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVN 190
Query: 681 NAPVSAKVDVYSFGVM 696
P+ + D++S GV+
Sbjct: 191 YEPLGLEADMWSIGVI 206
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 30/275 (10%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVK--KLDRLAQERE----REFKSEVSAIGRTHHKN 564
EELG G F IV K + +GK A K K RL+ R E + EV+ + H N
Sbjct: 18 EELGSGQFAIVRK-CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN 76
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
++ L + + +L+ E + G L + + + + +I G+ YLH +
Sbjct: 77 IITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK-- 134
Query: 625 VPIIHCDIKPQNI-LLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
I H D+KP+NI LLD K+ DFG++ + + I GT +VAPE
Sbjct: 135 -RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPEIVN 191
Query: 681 NAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDE 740
P+ + D++S GV+ ++ E ++E ++ YD DE
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF------------DE 239
Query: 741 PAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
++ S L K + + +DP +R + L+
Sbjct: 240 EYFSNTSELAKDFIRRLLV--KDPKRRMXIAQSLE 272
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 509 FKEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLV 566
F + LG GSF +V L ++ AI + + + +E + + + E + R H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+L + + NG L I I D + EI L YLH +
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--- 152
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIH D+KP+NILL+ +I+DFG +K+L S Q+R + + GT YV+PE
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 211
Query: 685 SAKVDVYSFGVMLLEIIC 702
D+++ G ++ +++
Sbjct: 212 CKSSDLWALGCIIYQLVA 229
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 33/222 (14%)
Query: 509 FKEELGRGSFGIVYK----GVLKSASGKAIAVKKL-DRLAQEREREFKSEVSAIGRTHHK 563
+ ++G G+FG V++ G+L +AVK L + + + + +F+ E + + +
Sbjct: 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 564 NLVQLLGFCDEALNRLLVYEFMGNGTL--------ANLIFAIPKPDWNLRVRIS------ 609
N+V+LLG C L++E+M G L + + ++ D + R R+S
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 610 ----------LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS- 658
++A G+ YL E +H D+ +N L+ KI+DFGLS+ + S
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 659 DQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
D + ++ PE + + DV+++GV+L EI
Sbjct: 228 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 46/295 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRT-HHKN 564
LG G FG V G+ K +A+ AVK L A E++ + SE+ + HKN
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFA--------------IPKPDWNLR--VRI 608
++ LLG C + ++ E+ G L + A +P+ + V
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 609 SLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTM 666
+ ++ARG+ YL ++C IH D+ +N+L+ KI+DFGL++ + + D + T
Sbjct: 209 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 667 IRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDC 726
R ++APE + + + DV+SFGV++ EI S I + +
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS-------PYPGIPVEELFKL 317
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLL 781
EG D+PA + + M+ C PS+RPT K +++ L+ +L
Sbjct: 318 LKEGH-----RMDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 30/275 (10%)
Query: 511 EELGRGSFGIV----YKGVLKSASGKAIAVKKL--DRLAQEREREFKSEVSAIGRTHHKN 564
EELG G F IV KG K + K I ++L R RE E + EV+ + H N
Sbjct: 32 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSRE-EIEREVNILREIRHPN 90
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
++ L + + +L+ E + G L + + + + +I G+ YLH +
Sbjct: 91 IITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK-- 148
Query: 625 VPIIHCDIKPQNI-LLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
I H D+KP+NI LLD K+ DFG++ + + I GT +VAPE
Sbjct: 149 -RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPEIVN 205
Query: 681 NAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDE 740
P+ + D++S GV+ ++ E ++E ++ YD DE
Sbjct: 206 YEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF------------DE 253
Query: 741 PAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
++ S L K + + +DP +R + L+
Sbjct: 254 EYFSNTSELAKDFIRRLLV--KDPKRRMXIAQSLE 286
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 14/224 (6%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIA--VKKLDRLAQER---EREFKSEVSAIGRTHHKNL 565
EELG G F IV K KS + A +KK A R E + EVS + + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 566 VQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNV 625
+ L + + +L+ E + G L + + +I G+ YLH +
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK--- 134
Query: 626 PIIHCDIKPQNI-LLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
I H D+KP+NI LLD K+ DFGL+ + + I GT +VAPE
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIVNY 192
Query: 682 APVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYD 725
P+ + D++S GV+ ++ + ++E A +T +YD
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 88/194 (45%), Gaps = 12/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAI-AVKKLDRLAQERE---REFKSEVSAIGRTHHKNLVQL 568
LG+G FG VY + + K I A+K L + E+E + + E+ H N++++
Sbjct: 23 LGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 80
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+ + L+ EF G L + + D E+A L Y HE +I
Sbjct: 81 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KVI 137
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
H DIKP+N+L+ KI+DFG S S + R + GT Y+ PE + KV
Sbjct: 138 HRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX---MCGTLDYLPPEMIEGKTHDEKV 194
Query: 689 DVYSFGVMLLEIIC 702
D++ GV+ E +
Sbjct: 195 DLWCAGVLCYEFLV 208
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 509 FKEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLV 566
F + LG GSF +V L ++ AI + + + +E + + + E + R H V
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+L + + NG L I I D + EI L YLH +
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--- 149
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIH D+KP+NILL+ +I+DFG +K+L S Q+R + + GT YV+PE
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 208
Query: 685 SAKVDVYSFGVMLLEIIC 702
D+++ G ++ +++
Sbjct: 209 CKSSDLWALGCIIYQLVA 226
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 509 FKEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLV 566
F + LG GSF +V L ++ AI + + + +E + + + E + R H V
Sbjct: 18 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 77
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+L + + NG L I I D + EI L YLH +
Sbjct: 78 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--- 134
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIH D+KP+NILL+ +I+DFG +K+L S Q+R + + GT YV+PE
Sbjct: 135 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 193
Query: 685 SAKVDVYSFGVMLLEIIC 702
D+++ G ++ +++
Sbjct: 194 CKSSDLWALGCIIYQLVA 211
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 88/194 (45%), Gaps = 12/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAI-AVKKLDRLAQERE---REFKSEVSAIGRTHHKNLVQL 568
LG+G FG VY + + K I A+K L + E+E + + E+ H N++++
Sbjct: 22 LGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+ + L+ EF G L + + D E+A L Y HE +I
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KVI 136
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
H DIKP+N+L+ KI+DFG S S + R + GT Y+ PE + KV
Sbjct: 137 HRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX---MCGTLDYLPPEMIEGKTHDEKV 193
Query: 689 DVYSFGVMLLEIIC 702
D++ GV+ E +
Sbjct: 194 DLWCAGVLCYEFLV 207
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 512 ELGRGSFGIVYKGVL---KSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQ 567
+LG G FG V +G+ +AVK L + R +K E+ + +H+++++
Sbjct: 21 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 568 LLGFCDEALNR--LLVYEFMGNGTLANLIFAIPKPDWNLR--VRISLEIARGLVYLHEEC 623
G C++ + LV E++ G+L + + P+ L + + +I G+ YLH +
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHSQ- 136
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG--YVAPEWFKN 681
IH ++ +N+LLDN KI DFGL+K + G + APE K
Sbjct: 137 --HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 682 APVSAKVDVYSFGVMLLEII 701
DV+SFGV L E++
Sbjct: 195 YKFYYASDVWSFGVTLYELL 214
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 35/215 (16%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT 560
E+ + +++LG G FG V+ + A+ K ++ E F +E + +
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE---AFLAEANVMKTL 234
Query: 561 HHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFA-------IPKPDWNLRVRISLEIA 613
H LV+L + ++ EFM G+L + + + +PK + S +IA
Sbjct: 235 QHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPK-----LIDFSAQIA 288
Query: 614 RGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTR-- 671
G+ ++ + IH D++ NIL+ KI+DFGL+++ G +
Sbjct: 289 EGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARV-------------GAKFP 332
Query: 672 -GYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRR 705
+ APE + K DV+SFG++L+EI+ R
Sbjct: 333 IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 367
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 17/193 (8%)
Query: 513 LGRGSFGIVYKGVL--KSASGKAIAVKKLDR--LAQERERE-FKSEVSAIGRTHHKNLVQ 567
LG+GSFG V +L +G+ AVK + + + Q+ ++E EV + + H N+++
Sbjct: 34 LGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 90
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
L F ++ LV E G L + I + + RI ++ G+ Y+H+ I
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KI 147
Query: 628 IHCDIKPQNILLDNY---FSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
+H D+KP+N+LL++ + +I DFGLS + + + GT Y+APE +
Sbjct: 148 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPEVL-HGTY 204
Query: 685 SAKVDVYSFGVML 697
K DV+S GV+L
Sbjct: 205 DEKCDVWSTGVIL 217
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 88/194 (45%), Gaps = 12/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAI-AVKKLDRLAQERE---REFKSEVSAIGRTHHKNLVQL 568
LG+G FG VY + + K I A+K L + E+E + + E+ H N++++
Sbjct: 22 LGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+ + L+ EF G L + + D E+A L Y HE +I
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KVI 136
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
H DIKP+N+L+ KI+DFG S S + R + GT Y+ PE + KV
Sbjct: 137 HRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX---MCGTLDYLPPEMIEGKTHDEKV 193
Query: 689 DVYSFGVMLLEIIC 702
D++ GV+ E +
Sbjct: 194 DLWCAGVLCYEFLV 207
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 142
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNA- 682
+ IIH D+KP N+ ++ KI DFGL++ +D T + TR Y APE NA
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYV--ATRWYRAPEIMLNAM 198
Query: 683 PVSAKVDVYSFGVMLLEIICCR 704
+ VD++S G ++ E++ R
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 31/222 (13%)
Query: 514 GRGSFGIVYKGVLKSASGKAIAVKKL---DRLAQEREREFKSEVSAIGRTHHKNLVQLLG 570
RG FG V+K L + +AVK D+ + + ERE S H+NL+Q +
Sbjct: 24 ARGRFGCVWKAQLMN---DFVAVKIFPLQDKQSWQSEREIFSTPG----MKHENLLQFIA 76
Query: 571 FCDEALNR----LLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHE----- 621
N L+ F G+L + + WN ++ ++RGL YLHE
Sbjct: 77 AEKRGSNLEVELWLITAFHDKGSLTDYLKG-NIITWNELCHVAETMSRGLSYLHEDVPWC 135
Query: 622 --ECNVP-IIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQ--SRTHTMIRGTRGYVAP 676
E + P I H D K +N+LL + +A ++DFGL+ + TH + GTR Y+AP
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV-GTRRYMAP 194
Query: 677 EWFKNA-----PVSAKVDVYSFGVMLLEIICCRRSVEMEVEE 713
E + A ++D+Y+ G++L E++ ++ + V+E
Sbjct: 195 EVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDE 236
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 512 ELGRGSFGIVYKGVL---KSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQ 567
+LG G FG V +G+ +AVK L + R +K E+ + +H+++++
Sbjct: 21 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 568 LLGFCDEALNR--LLVYEFMGNGTLANLIFAIPKPDWNLR--VRISLEIARGLVYLHEEC 623
G C++ + LV E++ G+L + + P+ L + + +I G+ YLH +
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQ- 136
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG--YVAPEWFKN 681
IH ++ +N+LLDN KI DFGL+K + G + APE K
Sbjct: 137 --HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 682 APVSAKVDVYSFGVMLLEII 701
DV+SFGV L E++
Sbjct: 195 YKFYYASDVWSFGVTLYELL 214
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 17/193 (8%)
Query: 513 LGRGSFGIVYKGVL--KSASGKAIAVKKLDR--LAQERERE-FKSEVSAIGRTHHKNLVQ 567
LG+GSFG V +L +G+ AVK + + + Q+ ++E EV + + H N+++
Sbjct: 40 LGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 96
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
L F ++ LV E G L + I + + RI ++ G+ Y+H+ I
Sbjct: 97 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KI 153
Query: 628 IHCDIKPQNILLDNY---FSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
+H D+KP+N+LL++ + +I DFGLS + + + GT Y+APE +
Sbjct: 154 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPEVL-HGTY 210
Query: 685 SAKVDVYSFGVML 697
K DV+S GV+L
Sbjct: 211 DEKCDVWSTGVIL 223
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 17/193 (8%)
Query: 513 LGRGSFGIVYKGVL--KSASGKAIAVKKLDR--LAQERERE-FKSEVSAIGRTHHKNLVQ 567
LG+GSFG V +L +G+ AVK + + + Q+ ++E EV + + H N+++
Sbjct: 57 LGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 113
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
L F ++ LV E G L + I + + RI ++ G+ Y+H+ I
Sbjct: 114 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KI 170
Query: 628 IHCDIKPQNILLDNY---FSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
+H D+KP+N+LL++ + +I DFGLS + + + GT Y+APE +
Sbjct: 171 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPEVL-HGTY 227
Query: 685 SAKVDVYSFGVML 697
K DV+S GV+L
Sbjct: 228 DEKCDVWSTGVIL 240
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 17/193 (8%)
Query: 513 LGRGSFGIVYKGVL--KSASGKAIAVKKLDR--LAQERERE-FKSEVSAIGRTHHKNLVQ 567
LG+GSFG V +L +G+ AVK + + + Q+ ++E EV + + H N+++
Sbjct: 58 LGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 114
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
L F ++ LV E G L + I + + RI ++ G+ Y+H+ I
Sbjct: 115 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KI 171
Query: 628 IHCDIKPQNILLDNY---FSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
+H D+KP+N+LL++ + +I DFGLS + + + GT Y+APE +
Sbjct: 172 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPEVL-HGTY 228
Query: 685 SAKVDVYSFGVML 697
K DV+S GV+L
Sbjct: 229 DEKCDVWSTGVIL 241
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 27/211 (12%)
Query: 510 KEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGR--TH------ 561
K+ +GRG +V + V + A+G AVK ++ A+ E EV R TH
Sbjct: 99 KDVIGRGVSSVVRRCVHR-ATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVA 157
Query: 562 -HKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGLV 617
H +++ L+ + + LV++ M G L + + A+ + + +R LE +
Sbjct: 158 GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLE---AVS 214
Query: 618 YLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 677
+LH I+H D+KP+NILLD+ ++SDFG S L + + GT GY+APE
Sbjct: 215 FLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHL--EPGEKLRELCGTPGYLAPE 269
Query: 678 WFK------NAPVSAKVDVYSFGVMLLEIIC 702
K + +VD+++ GV+L ++
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLA 300
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 88/197 (44%), Gaps = 11/197 (5%)
Query: 511 EELGRGSFGIVY--KGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
++LG G++G V K L A +KK EV+ + + H N+++L
Sbjct: 10 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 69
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F ++ N LV E G L + I K I ++ G YLH+ I+
Sbjct: 70 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH---NIV 126
Query: 629 HCDIKPQNILLDNYFS---AKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
H D+KP+N+LL++ KI DFGLS + GT Y+APE +
Sbjct: 127 HRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL--GTAYYIAPEVLRK-KYD 183
Query: 686 AKVDVYSFGVMLLEIIC 702
K DV+S GV+L ++C
Sbjct: 184 EKCDVWSCGVILYILLC 200
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 136/301 (45%), Gaps = 66/301 (21%)
Query: 513 LGRGSFG-IVYKGVLKSASGKAIAVKKL-----DRLAQEREREFKSEVSAIGRTHHKNLV 566
LG GS G +V++G S G+ +AVK++ D E + +S+ H N++
Sbjct: 23 LGYGSSGTVVFQG---SFQGRPVAVKRMLIDFCDIALMEIKLLTESD-------DHPNVI 72
Query: 567 QLLGFCDEALNRLLVYEF-MGNGTLANLIFAIPKPDWNLRVR-----ISL--EIARGLVY 618
+ +C E +R L + N L +L+ + D NL+++ ISL +IA G+ +
Sbjct: 73 RY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 619 LHEECNVPIIHCDIKPQNILL--DNYFSAK-----------ISDFGLSKLLLSDQSRTHT 665
LH ++ IIH D+KPQNIL+ + F+A ISDFGL K L S QS T
Sbjct: 131 LH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRT 187
Query: 666 MIR---GTRGYVAPEWFKNA-------PVSAKVDVYSFGVMLLEIIC-CRRSVEMEVEEE 714
+ GT G+ APE + + ++ +D++S G + I+ + + E
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247
Query: 715 GRAILTDWAYDCYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVL 774
I ++ D + + DRS + + + I DP KRPT VL
Sbjct: 248 SNIIRGIFSLD-------------EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL 294
Query: 775 Q 775
+
Sbjct: 295 R 295
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 10/196 (5%)
Query: 511 EELGRGSFGIVYKGVLK-SASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLL 569
++LG G++G V K + +AI + + ++ + EV+ + H N+++L
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
F ++ N LV E G L + I K + I ++ G+ YLH+ I+H
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVH 159
Query: 630 CDIKPQNILLDNYFS---AKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSA 686
D+KP+N+LL++ KI DFGLS + + + + GT Y+APE +
Sbjct: 160 RDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL--GTAYYIAPEVLRK-KYDE 216
Query: 687 KVDVYSFGVMLLEIIC 702
K DV+S GV+L ++
Sbjct: 217 KCDVWSIGVILFILLA 232
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 8/198 (4%)
Query: 509 FKEELGRGSFGI-VYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLV 566
F + LG GSF V L ++ AI + + + +E + + + E + R H V
Sbjct: 34 FGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+L + + NG L I I D + EI L YLH +
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--- 150
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLL--SDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIH D+KP+NILL+ +I+DFG +K+L S Q+R + + GT YV+PE
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 209
Query: 685 SAKVDVYSFGVMLLEIIC 702
D+++ G ++ +++
Sbjct: 210 CKSSDLWALGCIIYQLVA 227
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 512 ELGRGSFGIVYKGVLKSA---SGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQ 567
+LG G FG V +G+ +AVK L + K E+ + +H+N+V+
Sbjct: 28 DLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 87
Query: 568 LLGFCDEALNR--LLVYEFMGNGTLANLIFAIPKPDWNLR--VRISLEIARGLVYLHEEC 623
G C E L+ EF+ +G+L + K NL+ ++ +++I +G+ YL
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLGSR- 145
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG----YVAPEWF 679
+H D+ +N+L+++ KI DFGL+K + +D+ ++ R + APE
Sbjct: 146 --QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEX--XTVKDDRDSPVFWYAPECL 201
Query: 680 KNAPVSAKVDVYSFGVMLLEII 701
+ DV+SFGV L E++
Sbjct: 202 MQSKFYIASDVWSFGVTLHELL 223
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 37 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 94
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 149
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTADEMT-GYVATRWYRAPE 199
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 132/295 (44%), Gaps = 46/295 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRT-HHKN 564
LG G+FG V G+ K +A+ AVK L A E++ + SE+ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFA--------------IPKPDWNLR--VRI 608
++ LLG C + ++ + G L + A +P+ + V
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 609 SLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTM 666
+ ++ARG+ YL ++C IH D+ +N+L+ KI+DFGL++ + + D + T
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 667 IRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDC 726
R ++APE + + + DV+SFGV++ EI S I + +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS-------PYPGIPVEELFKL 271
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLL 781
EG D+PA + + M+ C PS+RPT K +++ L+ +L
Sbjct: 272 LKEGH-----RMDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 512 ELGRGSFGIVYKGVLKSA---SGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQ 567
+LG G FG V +G+ +AVK L + K E+ + +H+N+V+
Sbjct: 16 DLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 75
Query: 568 LLGFCDE--ALNRLLVYEFMGNGTLANLIFAIPKPDWNLR--VRISLEIARGLVYLHEEC 623
G C E L+ EF+ +G+L + K NL+ ++ +++I +G+ YL
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLGSR- 133
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG----YVAPEWF 679
+H D+ +N+L+++ KI DFGL+K + +D+ ++ R + APE
Sbjct: 134 --QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEX--XTVKDDRDSPVFWYAPECL 189
Query: 680 KNAPVSAKVDVYSFGVMLLEII 701
+ DV+SFGV L E++
Sbjct: 190 MQSKFYIASDVWSFGVTLHELL 211
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 88/197 (44%), Gaps = 11/197 (5%)
Query: 511 EELGRGSFGIVY--KGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
++LG G++G V K L A +KK EV+ + + H N+++L
Sbjct: 27 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 86
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F ++ N LV E G L + I K I ++ G YLH+ I+
Sbjct: 87 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH---NIV 143
Query: 629 HCDIKPQNILLDNYFS---AKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
H D+KP+N+LL++ KI DFGLS + GT Y+APE +
Sbjct: 144 HRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL--GTAYYIAPEVLRK-KYD 200
Query: 686 AKVDVYSFGVMLLEIIC 702
K DV+S GV+L ++C
Sbjct: 201 EKCDVWSCGVILYILLC 217
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 17/197 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR--LAQEREREFKSEVSAIGRTHHKNLVQLLG 570
+G+G+F V K +GK +AVK +D+ L ++ EV + +H N+V+L
Sbjct: 22 IGKGNFAKV-KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 571 FCDEALNRLLVYEFMGNGTLANLIFA---IPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
+ LV E+ G + + + A + + + + R +I + Y H++ I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF---I 134
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLS-KLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSA 686
+H D+K +N+LLD + KI+DFG S + ++ T G+ Y APE F+
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQGKKYDG 191
Query: 687 -KVDVYSFGVMLLEIIC 702
+VDV+S GV+L ++
Sbjct: 192 PEVDVWSLGVILYTLVS 208
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 17/197 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR--LAQEREREFKSEVSAIGRTHHKNLVQLLG 570
+G+G+F V K +GK +AVK +D+ L ++ EV + +H N+V+L
Sbjct: 22 IGKGNFAKV-KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 571 FCDEALNRLLVYEFMGNGTLANLIFA---IPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
+ LV E+ G + + + A + + + + R +I + Y H++ I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF---I 134
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLS-KLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSA 686
+H D+K +N+LLD + KI+DFG S + ++ T G+ Y APE F+
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQGKKYDG 191
Query: 687 -KVDVYSFGVMLLEIIC 702
+VDV+S GV+L ++
Sbjct: 192 PEVDVWSLGVILYTLVS 208
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 35 IGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 92
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 147
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 197
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 125/278 (44%), Gaps = 39/278 (14%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRL--AQEREREFKSEVSAIGRTHHKNLVQLL 569
ELGRG++G+V K + SG+ +AVK++ +QE++R ++ V
Sbjct: 14 ELGRGAYGVVEK-MRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 72
Query: 570 GFCDEALNRLLVYEFMGNG------TLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
G + + E M + + IP+ ++ +I++ I + L +LH +
Sbjct: 73 GALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPE---DILGKIAVSIVKALEHLHSKL 129
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE----WF 679
+V IH D+KP N+L++ K+ DFG+S L+ D ++ + G + Y+APE
Sbjct: 130 SV--IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK--DIDAGCKPYMAPERINPEL 185
Query: 680 KNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAE--GRLDVLVD 737
S K D++S G+ ++E+ R + YD + +L +V+
Sbjct: 186 NQKGYSVKSDIWSLGITMIELAILR-----------------FPYDSWGTPFQQLKQVVE 228
Query: 738 SDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
P + +++ C++++ +RPT ++Q
Sbjct: 229 EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 17/197 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR--LAQEREREFKSEVSAIGRTHHKNLVQLLG 570
+G+G+F V K +GK +AVK +D+ L ++ EV + +H N+V+L
Sbjct: 15 IGKGNFAKV-KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 73
Query: 571 FCDEALNRLLVYEFMGNGTLANLIFA---IPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
+ LV E+ G + + + A + + + + R +I + Y H++ I
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR---QIVSAVQYCHQKF---I 127
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLS-KLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSA 686
+H D+K +N+LLD + KI+DFG S + ++ T G+ Y APE F+
Sbjct: 128 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQGKKYDG 184
Query: 687 -KVDVYSFGVMLLEIIC 702
+VDV+S GV+L ++
Sbjct: 185 PEVDVWSLGVILYTLVS 201
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKXQKLTDDHVQFLI-YQILRGLKYIH--- 142
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 143 SADIIHRDLKPSNLAVNEDXELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 192
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 37 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 94
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 149
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTADEMT-GYVATRWYRAPE 199
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 142
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 192
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 26 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 83
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCAKLTDDHVQFLI-YQILRGLKYIH--- 138
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 188
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 17/201 (8%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDR--LAQEREREFKSEVSAIGRTHHKNLV 566
++ +G+G+F V K +G+ +AVK +D+ L ++ EV + +H N+V
Sbjct: 19 LQKTIGKGNFAKV-KLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIV 77
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFA---IPKPDWNLRVRISLEIARGLVYLHEEC 623
+L + LV E+ G + + + A + + + + R +I + Y H++
Sbjct: 78 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKY 134
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLS-KLLLSDQSRTHTMIRGTRGYVAPEWFKNA 682
I+H D+K +N+LLD + KI+DFG S + + ++ T G+ Y APE F+
Sbjct: 135 ---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC---GSPPYAAPELFQGK 188
Query: 683 PVSA-KVDVYSFGVMLLEIIC 702
+VDV+S GV+L ++
Sbjct: 189 KYDGPEVDVWSLGVILYTLVS 209
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 37 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 94
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 149
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTADEMT-GYVATRWYRAPE 199
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 18/196 (9%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD--RLAQEREREFKSEVSAIGRTHHKNLVQL 568
EELG+G+F +V + +K +G+ A K ++ +L+ ++ + E H N+V+L
Sbjct: 10 EELGKGAFSVVRR-CMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 68
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFA---IPKPDWNLRVRISLEIARGLVYLHEECNV 625
E LV++ + G L I A + D + ++ LE C++
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN-------HCHL 121
Query: 626 -PIIHCDIKPQNILLDNY---FSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
I+H D+KP+N+LL + + K++DFGL+ + DQ + GT GY++PE +
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRK 180
Query: 682 APVSAKVDVYSFGVML 697
P VD+++ GV+L
Sbjct: 181 DPYGKPVDMWACGVIL 196
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 40 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 97
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 98 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 152
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 153 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 202
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 203 IMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 18/196 (9%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD--RLAQEREREFKSEVSAIGRTHHKNLVQL 568
EELG+G+F +V + +K +G+ A K ++ +L+ ++ + E H N+V+L
Sbjct: 10 EELGKGAFSVVRR-CMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 68
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFA---IPKPDWNLRVRISLEIARGLVYLHEECNV 625
E LV++ + G L I A + D + ++ LE C++
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESV-------NHCHL 121
Query: 626 -PIIHCDIKPQNILLDNY---FSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
I+H D+KP+N+LL + + K++DFGL+ + DQ + GT GY++PE +
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRK 180
Query: 682 APVSAKVDVYSFGVML 697
P VD+++ GV+L
Sbjct: 181 DPYGKPVDMWACGVIL 196
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 35 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 92
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 147
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 197
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 513 LGRGSFGIVY--KGVLKSASGKAIAVKKLDRLAQERERE----FKSEVSAIGRTHHKNLV 566
LG+G +G V+ + V + +GK A+K L + R + K+E + + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 567 QLLGFCDEALNRLLVYEFMGNGTL-----ANLIFAIPKPDWNLRVRISLEIARGLVYLHE 621
L+ L+ E++ G L IF + L EI+ L +LH+
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA-----EISMALGHLHQ 139
Query: 622 ECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
+ II+ D+KP+NI+L++ K++DFGL K + D + TH GT Y+APE
Sbjct: 140 KG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFC-GTIEYMAPEILMR 195
Query: 682 APVSAKVDVYSFGVMLLEII 701
+ + VD +S G ++ +++
Sbjct: 196 SGHNRAVDWWSLGALMYDML 215
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 132/295 (44%), Gaps = 46/295 (15%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAI--AVKKLDRLAQERE-REFKSEVSAIGRT-HHKN 564
LG G+FG V G+ K +A+ AVK L A E++ + SE+ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFA--------------IPKPDWNLR--VRI 608
++ LLG C + ++ + G L + A +P+ + V
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 609 SLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTM 666
+ ++ARG+ YL ++C IH D+ +N+L+ KI+DFGL++ + + D + T
Sbjct: 163 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 667 IRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDC 726
R ++APE + + + DV+SFGV++ EI S I + +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS-------PYPGIPVEELFKL 271
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLL 781
EG D+PA + + M+ C PS+RPT K +++ L+ +L
Sbjct: 272 LKEGH-----RMDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 50 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 107
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 162
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 212
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 49 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 106
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 107 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 161
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 162 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 211
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V SG IAVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 59 VGSGAYGSVCSSY-DVKSGLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 116
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 117 DVFTPATSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 171
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 172 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 221
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 222 IMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 41 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 98
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 153
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 154 SADIIHRDLKPSNLAVNEDXELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 203
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 36/217 (16%)
Query: 513 LGRGSFGIVYKGVLKSASG---------KAIAVKKLDRLAQERE-REFKSEVSAIGRT-H 561
LG G+FG V VL A G +AVK L A E++ + SE+ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 562 HKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR---------------- 605
HKN++ LLG C + ++ E+ G L + A P
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 606 VRISLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRT 663
V + ++ARG+ YL ++C IH D+ +N+L+ KI+DFGL++ + D +
Sbjct: 153 VSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK 208
Query: 664 HTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
T R ++APE + + + DV+SFGV+L EI
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 36 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 93
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 148
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 198
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQLLG 570
+G G+ GIV + G +AVKKL R Q + ++ E+ + +HKN++ LL
Sbjct: 32 IGSGAQGIVC-AAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLN 90
Query: 571 F------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
+E + LV E M + L +I + D + ++ G+ +LH +
Sbjct: 91 VFTPQKTLEEFQDVYLVMELM-DANLCQVIHM--ELDHERMSYLLYQMLCGIKHLH---S 144
Query: 625 VPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIH D+KP NI++ + + KI DFGL++ ++ T ++ TR Y APE
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVV--TRYYRAPEVILGMGY 202
Query: 685 SAKVDVYSFGVMLLEII 701
+A VD++S G ++ E++
Sbjct: 203 AANVDIWSVGCIMGELV 219
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 96/192 (50%), Gaps = 10/192 (5%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD--RLAQEREREFKSEVSAIGRTHHKNLVQL 568
EELG+G+F +V + V K +G+ A ++ +L+ ++ + E H N+V+L
Sbjct: 17 EELGKGAFSVVRRCV-KVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRL 75
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
E + L+++ + G L I A +I +++ H+ + ++
Sbjct: 76 HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVV 132
Query: 629 HCDIKPQNILLDNYF---SAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
H ++KP+N+LL + + K++DFGL+ + + + + GT GY++PE + P
Sbjct: 133 HRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYG 191
Query: 686 AKVDVYSFGVML 697
VD+++ GV+L
Sbjct: 192 KPVDLWACGVIL 203
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 125/298 (41%), Gaps = 65/298 (21%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHH---------- 562
LG+G+FG V K + + A+KK+ R +E+ SEV + +H
Sbjct: 14 LGQGAFGQVVKA-RNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 563 ---KNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRV----RISLEIARG 615
+N V+ + + + E+ N TL +LI + + N + R+ +I
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHS---ENLNQQRDEYWRLFRQILEA 128
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK--------LLLSDQ-----SR 662
L Y+H + IIH D+KP NI +D + KI DFGL+K L L Q S
Sbjct: 129 LSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 663 THTMIRGTRGYVAPEWFK-NAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTD 721
T GT YVA E + K+D+YS G++ E+I S ME
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP-FSTGME----------- 233
Query: 722 WAYDCYAEGRLDVL-----VDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVL 774
R+++L V + P D ++++ I I DP+KRP + +L
Sbjct: 234 ---------RVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 32 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 89
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 144
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 145 SADIIHRDLKPSNLAVNEDSELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 194
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 26 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 83
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 138
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 188
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Query: 513 LGRGSFGIVYKGVLKSASGKAI--AVKKLDR-LAQEREREFKSEVSAIGRTHHKNLVQLL 569
LG G FG VY+GV + G+ I AVK + + + +F SE + H ++V+L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRI----SLEIARGLVYLHEECNV 625
G +E +++ E G L + + + +L+V SL+I + + YL ++
Sbjct: 76 GIIEEEPTWIIM-ELYPYGELGHYL---ERNKNSLKVLTLVLYSLQICKAMAYLE---SI 128
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+H DI +NIL+ + K+ DFGLS+ + + ++ R +++PE +
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 188
Query: 686 AKVDVYSFGVMLLEII 701
DV+ F V + EI+
Sbjct: 189 TASDVWMFAVCMWEIL 204
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 142
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 192
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 142
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 192
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Query: 513 LGRGSFGIVYKGVLKSASGKAI--AVKKLDR-LAQEREREFKSEVSAIGRTHHKNLVQLL 569
LG G FG VY+GV + G+ I AVK + + + +F SE + H ++V+L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRI----SLEIARGLVYLHEECNV 625
G +E +++ E G L + + + +L+V SL+I + + YL ++
Sbjct: 92 GIIEEEPTWIIM-ELYPYGELGHYL---ERNKNSLKVLTLVLYSLQICKAMAYLE---SI 144
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+H DI +NIL+ + K+ DFGLS+ + + ++ R +++PE +
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 204
Query: 686 AKVDVYSFGVMLLEII 701
DV+ F V + EI+
Sbjct: 205 TASDVWMFAVCMWEIL 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 142
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 192
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Query: 513 LGRGSFGIVYKGVLKSASGKAI--AVKKLDR-LAQEREREFKSEVSAIGRTHHKNLVQLL 569
LG G FG VY+GV + G+ I AVK + + + +F SE + H ++V+L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRI----SLEIARGLVYLHEECNV 625
G +E +++ E G L + + + +L+V SL+I + + YL ++
Sbjct: 80 GIIEEEPTWIIM-ELYPYGELGHYL---ERNKNSLKVLTLVLYSLQICKAMAYLE---SI 132
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+H DI +NIL+ + K+ DFGLS+ + + ++ R +++PE +
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 192
Query: 686 AKVDVYSFGVMLLEII 701
DV+ F V + EI+
Sbjct: 193 TASDVWMFAVCMWEIL 208
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 36 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 93
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 148
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 149 SADIIHRDLKPSNLAVNEDSELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 198
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ + D +++ I +I RGL Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKSQKLTDDHVQFLI-YQILRGLKYIH--- 142
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL + HT T GYVA W++
Sbjct: 143 SADIIHRDLKPSNLAVNEDSELKILDFGLCR---------HTDDEMT-GYVATRWYRAPE 192
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 21/202 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 142
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN-A 682
+ IIH D+KP N+ ++ KI DFGL++ +D T + TR Y APE N
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGXV--ATRWYRAPEIMLNWM 198
Query: 683 PVSAKVDVYSFGVMLLEIICCR 704
+ VD++S G ++ E++ R
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 142
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 192
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKXQKLTDDHVQFLI-YQILRGLKYIH--- 142
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 192
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 97/197 (49%), Gaps = 17/197 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR--LAQEREREFKSEVSAIGRTHHKNLVQLLG 570
+G+G+F V K +GK +AV+ +D+ L ++ EV + +H N+V+L
Sbjct: 22 IGKGNFAKV-KLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 571 FCDEALNRLLVYEFMGNGTLANLIFA---IPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
+ LV E+ G + + + A + + + + R +I + Y H++ I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF---I 134
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLS-KLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSA 686
+H D+K +N+LLD + KI+DFG S + ++ T G+ Y APE F+
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQGKKYDG 191
Query: 687 -KVDVYSFGVMLLEIIC 702
+VDV+S GV+L ++
Sbjct: 192 PEVDVWSLGVILYTLVS 208
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 42 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 99
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 154
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 204
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 96/193 (49%), Gaps = 17/193 (8%)
Query: 513 LGRGSFGIVYKGVL--KSASGKAIAVKKLDR--LAQERERE-FKSEVSAIGRTHHKNLVQ 567
LG+GSFG V +L +G+ AVK + + + Q+ ++E EV + + H N+ +
Sbjct: 34 LGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXK 90
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
L F ++ LV E G L + I + + RI ++ G+ Y H+ I
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKN---KI 147
Query: 628 IHCDIKPQNILLDNY---FSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
+H D+KP+N+LL++ + +I DFGLS + + + GT Y+APE +
Sbjct: 148 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI--GTAYYIAPEVL-HGTY 204
Query: 685 SAKVDVYSFGVML 697
K DV+S GV+L
Sbjct: 205 DEKCDVWSTGVIL 217
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 32 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 89
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 144
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 194
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 42 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 99
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 154
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 204
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 35 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 92
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 147
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 148 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 197
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 29 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 86
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 87 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 141
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 142 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 191
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 192 IMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 37 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 94
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 149
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 199
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 142
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 192
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 32 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 89
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 144
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 194
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 142
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 192
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 32 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 89
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 144
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 194
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 41 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 98
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 153
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 154 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 203
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 36 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 93
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 148
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 198
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 36 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 93
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 148
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 198
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 49 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 106
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 107 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 161
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 162 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 211
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 36/217 (16%)
Query: 513 LGRGSFGIVYKGVLKSASG---------KAIAVKKLDRLAQERE-REFKSEVSAIGRT-H 561
LG G+FG V VL A G +AVK L A E++ + SE+ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 562 HKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR---------------- 605
HKN++ LLG C + ++ E+ G L + A P
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 606 VRISLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRT 663
V + ++ARG+ YL ++C IH D+ +N+L+ KI+DFGL++ + D +
Sbjct: 153 VSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 664 HTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
T R ++APE + + + DV+SFGV+L EI
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 50 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 107
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 162
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 212
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 35 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 92
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 147
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 148 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 197
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 53 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 110
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 111 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 165
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 166 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 215
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 35/207 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLVQLLGF 571
+G GSFG+VY+ L SG+ +A+KK+ +++ FK+ E+ + + H N+V+L F
Sbjct: 62 IGNGSFGVVYQAKL-CDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 572 C-------DEA-LNRLL------VYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGL 616
DE LN +L VY + + A + + V++ + ++ R L
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV------IYVKLYMYQLFRSL 169
Query: 617 VYLHEECNVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
Y+H + I H DIKPQN+LLD + K+ DFG +K L+ + + +R Y A
Sbjct: 170 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRA 224
Query: 676 PEW-FKNAPVSAKVDVYSFGVMLLEII 701
PE F ++ +DV+S G +L E++
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 27 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 84
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 85 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 139
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 140 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 189
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 28 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 85
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 86 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 140
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 141 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 190
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 142
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 192
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 27 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 84
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 85 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 139
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 140 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 189
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 10/192 (5%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD--RLAQEREREFKSEVSAIGRTHHKNLVQL 568
E++G+G+F +V + V K +G A K ++ +L+ ++ + E H N+V+L
Sbjct: 10 EDIGKGAFSVVRRCV-KLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRL 68
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
E LV++ + G L I A +I +++ H+ + ++
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVV 125
Query: 629 HCDIKPQNILLDNY---FSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
H D+KP+N+LL + + K++DFGL+ + DQ + GT GY++PE +
Sbjct: 126 HRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRKEAYG 184
Query: 686 AKVDVYSFGVML 697
VD+++ GV+L
Sbjct: 185 KPVDIWACGVIL 196
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 26 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 83
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 138
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 188
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 36/217 (16%)
Query: 513 LGRGSFGIVYKGVLKSASG---------KAIAVKKLDRLAQERE-REFKSEVSAIGRT-H 561
LG G+FG V VL A G +AVK L A E++ + SE+ +
Sbjct: 25 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 562 HKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR---------------- 605
HKN++ LLG C + ++ E+ G L + A P
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 606 VRISLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRT 663
V + ++ARG+ YL ++C IH D+ +N+L+ KI+DFGL++ + D +
Sbjct: 142 VSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 197
Query: 664 HTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
T R ++APE + + + DV+SFGV+L EI
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 234
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 36/217 (16%)
Query: 513 LGRGSFGIVYKGVLKSASG---------KAIAVKKLDRLAQERE-REFKSEVSAIGRT-H 561
LG G+FG V VL A G +AVK L A E++ + SE+ +
Sbjct: 77 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 562 HKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR---------------- 605
HKN++ LLG C + ++ E+ G L + A P
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 606 VRISLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRT 663
V + ++ARG+ YL ++C IH D+ +N+L+ KI+DFGL++ + D +
Sbjct: 194 VSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249
Query: 664 HTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
T R ++APE + + + DV+SFGV+L EI
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 286
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 116/287 (40%), Gaps = 34/287 (11%)
Query: 497 FSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKL---DRLAQEREREFKSE 553
YN L A ++++GRG F VY+ G +A+KK+ D + + + E
Sbjct: 26 MGYNTL--ANFRIEKKIGRGQFSEVYRAAC-LLDGVPVALKKVQIFDLMDAKARADCIKE 82
Query: 554 VSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS---- 609
+ + + +H N+++ E +V E G L+ +I K + R
Sbjct: 83 IDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYF 142
Query: 610 LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRG 669
+++ L ++H ++H DIKP N+ + K+ D GL + S + H+++ G
Sbjct: 143 VQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-G 198
Query: 670 TRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIICCRRSV---EMEVEEEGRAILTDWAYDC 726
T Y++PE + K D++S G +L E+ + +M + + I
Sbjct: 199 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI-------- 250
Query: 727 YAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVV 773
D P + ++ + CI DP KRP + V
Sbjct: 251 ---------EQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 36/217 (16%)
Query: 513 LGRGSFGIVYKGVLKSASG---------KAIAVKKLDRLAQERE-REFKSEVSAIGRT-H 561
LG G+FG V VL A G +AVK L A E++ + SE+ +
Sbjct: 28 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 562 HKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR---------------- 605
HKN++ LLG C + ++ E+ G L + A P
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 606 VRISLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRT 663
V + ++ARG+ YL ++C IH D+ +N+L+ KI+DFGL++ + D +
Sbjct: 145 VSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 200
Query: 664 HTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
T R ++APE + + + DV+SFGV+L EI
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 237
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 35/207 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLVQLLGF 571
+G GSFG+VY+ L SG+ +A+KK+ +++ FK+ E+ + + H N+V+L F
Sbjct: 64 IGNGSFGVVYQAKL-CDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRYF 117
Query: 572 C-------DEA-LNRLL------VYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGL 616
DE LN +L VY + + A + + V++ + ++ R L
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV------IYVKLYMYQLFRSL 171
Query: 617 VYLHEECNVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
Y+H + I H DIKPQN+LLD + K+ DFG +K L+ + + +R Y A
Sbjct: 172 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRA 226
Query: 676 PEW-FKNAPVSAKVDVYSFGVMLLEII 701
PE F ++ +DV+S G +L E++
Sbjct: 227 PELIFGATDYTSSIDVWSAGCVLAELL 253
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 35/207 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLVQLLGF 571
+G GSFG+VY+ L SG+ +A+KK+ +++ FK+ E+ + + H N+V+L F
Sbjct: 36 IGNGSFGVVYQAKL-CDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRYF 89
Query: 572 C-------DEA-LNRLL------VYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGL 616
DE LN +L VY + + A + + V++ + ++ R L
Sbjct: 90 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV------IYVKLYMYQLFRSL 143
Query: 617 VYLHEECNVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
Y+H + I H DIKPQN+LLD + K+ DFG +K L+ + + +R Y A
Sbjct: 144 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRA 198
Query: 676 PEW-FKNAPVSAKVDVYSFGVMLLEII 701
PE F ++ +DV+S G +L E++
Sbjct: 199 PELIFGATDYTSSIDVWSAGCVLAELL 225
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 35/207 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLVQLLGF 571
+G GSFG+VY+ L SG+ +A+KK+ +++ FK+ E+ + + H N+V+L F
Sbjct: 62 IGNGSFGVVYQAKL-CDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 572 C-------DEA-LNRLL------VYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGL 616
DE LN +L VY + + A + + V++ + ++ R L
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV------IYVKLYMYQLFRSL 169
Query: 617 VYLHEECNVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
Y+H + I H DIKPQN+LLD + K+ DFG +K L+ + + +R Y A
Sbjct: 170 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRA 224
Query: 676 PEW-FKNAPVSAKVDVYSFGVMLLEII 701
PE F ++ +DV+S G +L E++
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 35/207 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLVQLLGF 571
+G GSFG+VY+ L SG+ +A+KK+ +++ FK+ E+ + + H N+V+L F
Sbjct: 56 IGNGSFGVVYQAKL-CDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRYF 109
Query: 572 C-------DEA-LNRLL------VYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGL 616
DE LN +L VY + + A + + V++ + ++ R L
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV------IYVKLYMYQLFRSL 163
Query: 617 VYLHEECNVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
Y+H + I H DIKPQN+LLD + K+ DFG +K L+ + + +R Y A
Sbjct: 164 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRA 218
Query: 676 PEW-FKNAPVSAKVDVYSFGVMLLEII 701
PE F ++ +DV+S G +L E++
Sbjct: 219 PELIFGATDYTSSIDVWSAGCVLAELL 245
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 35/207 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLVQLLGF 571
+G GSFG+VY+ L SG+ +A+KK+ +++ FK+ E+ + + H N+V+L F
Sbjct: 47 IGNGSFGVVYQAKL-CDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRYF 100
Query: 572 C-------DEA-LNRLL------VYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGL 616
DE LN +L VY + + A + + V++ + ++ R L
Sbjct: 101 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV------IYVKLYMYQLFRSL 154
Query: 617 VYLHEECNVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
Y+H + I H DIKPQN+LLD + K+ DFG +K L+ + + +R Y A
Sbjct: 155 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRA 209
Query: 676 PEW-FKNAPVSAKVDVYSFGVMLLEII 701
PE F ++ +DV+S G +L E++
Sbjct: 210 PELIFGATDYTSSIDVWSAGCVLAELL 236
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 36/217 (16%)
Query: 513 LGRGSFGIVYKGVLKSASG---------KAIAVKKLDRLAQERE-REFKSEVSAIGRT-H 561
LG G+FG V VL A G +AVK L A E++ + SE+ +
Sbjct: 29 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 562 HKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR---------------- 605
HKN++ LLG C + ++ E+ G L + A P
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 606 VRISLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRT 663
V + ++ARG+ YL ++C IH D+ +N+L+ KI+DFGL++ + D +
Sbjct: 146 VSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 201
Query: 664 HTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
T R ++APE + + + DV+SFGV+L EI
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 238
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 35/207 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLVQLLGF 571
+G GSFG+VY+ L SG+ +A+KK+ +++ FK+ E+ + + H N+V+L F
Sbjct: 40 IGNGSFGVVYQAKL-CDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 572 C-------DEA-LNRLL------VYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGL 616
DE LN +L VY + + A + + V++ + ++ R L
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV------IYVKLYMYQLFRSL 147
Query: 617 VYLHEECNVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
Y+H + I H DIKPQN+LLD + K+ DFG +K L+ + + +R Y A
Sbjct: 148 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRA 202
Query: 676 PEW-FKNAPVSAKVDVYSFGVMLLEII 701
PE F ++ +DV+S G +L E++
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 36/217 (16%)
Query: 513 LGRGSFGIVYKGVLKSASG---------KAIAVKKLDRLAQERE-REFKSEVSAIGRT-H 561
LG G+FG V VL A G +AVK L A E++ + SE+ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 562 HKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLR---------------- 605
HKN++ LLG C + ++ E+ G L + A P
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 606 VRISLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRT 663
V + ++ARG+ YL ++C IH D+ +N+L+ KI+DFGL++ + D +
Sbjct: 153 VSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 664 HTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
T R ++APE + + + DV+SFGV+L EI
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 35/207 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLVQLLGF 571
+G GSFG+VY+ L SG+ +A+KK+ +++ FK+ E+ + + H N+V+L F
Sbjct: 66 IGNGSFGVVYQAKL-CDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRYF 119
Query: 572 C-------DEA-LNRLL------VYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGL 616
DE LN +L VY + + A + + V++ + ++ R L
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV------IYVKLYMYQLFRSL 173
Query: 617 VYLHEECNVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
Y+H + I H DIKPQN+LLD + K+ DFG +K L+ + + +R Y A
Sbjct: 174 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRA 228
Query: 676 PEW-FKNAPVSAKVDVYSFGVMLLEII 701
PE F ++ +DV+S G +L E++
Sbjct: 229 PELIFGATDYTSSIDVWSAGCVLAELL 255
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
+GRG FG VY G K+ +GK A+K LD+ +R + + E A+ + + ++ L+
Sbjct: 197 IGRGGFGEVY-GCRKADTGKMYAMKCLDK---KRIKMKQGETLAL---NERIMLSLVSTG 249
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVR------------ISLEIARGLVYLH 620
D + Y F L+ ++ + D + + + EI GL ++H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF- 679
N +++ D+KP NILLD + +ISD GL+ + + H + GT GY+APE
Sbjct: 310 ---NRFVVYRDLKPANILLDEHGHVRISDLGLACDF--SKKKPHASV-GTHGYMAPEVLQ 363
Query: 680 KNAPVSAKVDVYSFGVMLLEII 701
K + D +S G ML +++
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
+GRG FG VY G K+ +GK A+K LD+ +R + + E A+ + + ++ L+
Sbjct: 197 IGRGGFGEVY-GCRKADTGKMYAMKCLDK---KRIKMKQGETLAL---NERIMLSLVSTG 249
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVR------------ISLEIARGLVYLH 620
D + Y F L+ ++ + D + + + EI GL ++H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF- 679
N +++ D+KP NILLD + +ISD GL+ + + H + GT GY+APE
Sbjct: 310 ---NRFVVYRDLKPANILLDEHGHVRISDLGLACDF--SKKKPHASV-GTHGYMAPEVLQ 363
Query: 680 KNAPVSAKVDVYSFGVMLLEII 701
K + D +S G ML +++
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLL 385
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 62/297 (20%)
Query: 513 LGRGSFG-IVYKGVLKSASGKAIAVKKL-----DRLAQEREREFKSEVSAIGRTHHKNLV 566
LG GS G +V++G S G+ +AVK++ D E + +S+ H N++
Sbjct: 41 LGYGSSGTVVFQG---SFQGRPVAVKRMLIDFCDIALMEIKLLTESD-------DHPNVI 90
Query: 567 QLLGFCDEALNRLLVYEF-MGNGTLANLIFAIPKPDWNLRVR-----ISL--EIARGLVY 618
+ +C E +R L + N L +L+ + D NL+++ ISL +IA G+ +
Sbjct: 91 RY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 148
Query: 619 LHEECNVPIIHCDIKPQNILL--DNYFSAK-----------ISDFGLSKLLLSDQSRTHT 665
LH ++ IIH D+KPQNIL+ + F+A ISDFGL K L S Q
Sbjct: 149 LH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 666 MIR---GTRGYVAPEWFKNAP---VSAKVDVYSFGVMLLEIIC-CRRSVEMEVEEEGRAI 718
+ GT G+ APE + + ++ +D++S G + I+ + + E I
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 265
Query: 719 LTDWAYDCYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
++ D + + DRS + + + I DP KRPT VL+
Sbjct: 266 RGIFSLD-------------EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
+GRG FG VY G K+ +GK A+K LD+ +R + + E A+ + + ++ L+
Sbjct: 197 IGRGGFGEVY-GCRKADTGKMYAMKCLDK---KRIKMKQGETLAL---NERIMLSLVSTG 249
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVR------------ISLEIARGLVYLH 620
D + Y F L+ ++ + D + + + EI GL ++H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF- 679
N +++ D+KP NILLD + +ISD GL+ + + H + GT GY+APE
Sbjct: 310 ---NRFVVYRDLKPANILLDEHGHVRISDLGLACDF--SKKKPHASV-GTHGYMAPEVLQ 363
Query: 680 KNAPVSAKVDVYSFGVMLLEII 701
K + D +S G ML +++
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLL 385
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
+GRG FG VY G K+ +GK A+K LD+ +R + + E A+ + + ++ L+
Sbjct: 196 IGRGGFGEVY-GCRKADTGKMYAMKCLDK---KRIKMKQGETLAL---NERIMLSLVSTG 248
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVR------------ISLEIARGLVYLH 620
D + Y F L+ ++ + D + + + EI GL ++H
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 308
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF- 679
N +++ D+KP NILLD + +ISD GL+ + + H + GT GY+APE
Sbjct: 309 ---NRFVVYRDLKPANILLDEHGHVRISDLGLACDF--SKKKPHASV-GTHGYMAPEVLQ 362
Query: 680 KNAPVSAKVDVYSFGVMLLEII 701
K + D +S G ML +++
Sbjct: 363 KGVAYDSSADWFSLGCMLFKLL 384
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 35/207 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLVQLLGF 571
+G GSFG+VY+ L SG+ +A+KK+ +++ FK+ E+ + + H N+V+L F
Sbjct: 29 IGNGSFGVVYQAKL-CDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRYF 82
Query: 572 C-------DEA-LNRLL------VYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGL 616
DE LN +L VY + + A + + V++ + ++ R L
Sbjct: 83 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV------IYVKLYMYQLFRSL 136
Query: 617 VYLHEECNVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
Y+H + I H DIKPQN+LLD + K+ DFG +K L+ + + +R Y A
Sbjct: 137 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRA 191
Query: 676 PEW-FKNAPVSAKVDVYSFGVMLLEII 701
PE F ++ +DV+S G +L E++
Sbjct: 192 PELIFGATDYTSSIDVWSAGCVLAELL 218
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 35/207 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLVQLLGF 571
+G GSFG+VY+ L SG+ +A+KK+ +++ FK+ E+ + + H N+V+L F
Sbjct: 40 IGNGSFGVVYQAKL-CDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 572 C-------DEA-LNRLL------VYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGL 616
DE LN +L VY + + A + + V++ + ++ R L
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV------IYVKLYMYQLFRSL 147
Query: 617 VYLHEECNVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
Y+H + I H DIKPQN+LLD + K+ DFG +K L+ + + +R Y A
Sbjct: 148 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRA 202
Query: 676 PEW-FKNAPVSAKVDVYSFGVMLLEII 701
PE F ++ +DV+S G +L E++
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 36/217 (16%)
Query: 513 LGRGSFGIVYKGVLKSASG---------KAIAVKKLDRLAQERE-REFKSEVSAIGRT-H 561
LG G+FG V VL A G +AVK L A E++ + SE+ +
Sbjct: 21 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 562 HKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNL----------------R 605
HKN++ LLG C + ++ E+ G L + A P
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 606 VRISLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRT 663
V + ++ARG+ YL ++C IH D+ +N+L+ KI+DFGL++ + D +
Sbjct: 138 VSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 664 HTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
T R ++APE + + + DV+SFGV+L EI
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 230
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 510 KEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGR-THHKNLVQL 568
KE++G GS+ + K + A+ AVK +D+ +R+ E+ + R H N++ L
Sbjct: 27 KEDIGVGSYSVC-KRCIHKATNMEFAVKIIDK----SKRDPTEEIEILLRYGQHPNIITL 81
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
D+ +V E M G L + I + I + + YLH + ++
Sbjct: 82 KDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG---VV 138
Query: 629 HCDIKPQNILL----DNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
H D+KP NIL N S +I DFG +K L ++ T T +VAPE +
Sbjct: 139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLERQGY 197
Query: 685 SAKVDVYSFGVMLLEII 701
A D++S GV+L ++
Sbjct: 198 DAACDIWSLGVLLYTML 214
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 35/207 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLVQLLGF 571
+G GSFG+VY+ L SG+ +A+KK+ +++ FK+ E+ + + H N+V+L F
Sbjct: 28 IGNGSFGVVYQAKL-CDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 572 C-------DEA-LNRLL------VYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGL 616
DE LN +L VY + + A + + V++ + ++ R L
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV------IYVKLYMYQLFRSL 135
Query: 617 VYLHEECNVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
Y+H + I H DIKPQN+LLD + K+ DFG +K L+ + + +R Y A
Sbjct: 136 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRA 190
Query: 676 PEW-FKNAPVSAKVDVYSFGVMLLEII 701
PE F ++ +DV+S G +L E++
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 35/207 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLVQLLGF 571
+G GSFG+VY+ L SG+ +A+KK+ +++ FK+ E+ + + H N+V+L F
Sbjct: 107 IGNGSFGVVYQAKL-CDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRYF 160
Query: 572 C-------DEA-LNRLL------VYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGL 616
DE LN +L VY + + A + + V++ + ++ R L
Sbjct: 161 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV------IYVKLYMYQLFRSL 214
Query: 617 VYLHEECNVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
Y+H + I H DIKPQN+LLD + K+ DFG +K L+ + + +R Y A
Sbjct: 215 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRA 269
Query: 676 PEW-FKNAPVSAKVDVYSFGVMLLEII 701
PE F ++ +DV+S G +L E++
Sbjct: 270 PELIFGATDYTSSIDVWSAGCVLAELL 296
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 22/198 (11%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTH-HKNLVQLLGF 571
LG GSF I K V K S +A AVK +++ E + E++A+ H N+V+L
Sbjct: 19 LGEGSFSICRKCVHKK-SNQAFAVK---IISKRMEANTQKEITALKLCEGHPNIVKLHEV 74
Query: 572 CDEALNRLLVYEFMGNGTLANLI-----FAIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+ L+ LV E + G L I F+ + + +R +S + ++H+ V
Sbjct: 75 FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS-----AVSHMHD---VG 126
Query: 627 IIHCDIKPQNILL---DNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++H D+KP+N+L ++ KI DFG ++L D T T Y APE
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNG 185
Query: 684 VSAKVDVYSFGVMLLEII 701
D++S GV+L ++
Sbjct: 186 YDESCDLWSLGVILYTML 203
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 35/207 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLVQLLGF 571
+G GSFG+VY+ L SG+ +A+KK+ +++ FK+ E+ + + H N+V+L F
Sbjct: 28 IGNGSFGVVYQAKL-CDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 572 C-------DEA-LNRLL------VYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGL 616
DE LN +L VY + + A + + V++ + ++ R L
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV------IYVKLYMYQLFRSL 135
Query: 617 VYLHEECNVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
Y+H + I H DIKPQN+LLD + K+ DFG +K L+ + + +R Y A
Sbjct: 136 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRA 190
Query: 676 PEW-FKNAPVSAKVDVYSFGVMLLEII 701
PE F ++ +DV+S G +L E++
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 35/207 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLVQLLGF 571
+G GSFG+VY+ L SG+ +A+KK+ +++ FK+ E+ + + H N+V+L F
Sbjct: 32 IGNGSFGVVYQAKL-CDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRYF 85
Query: 572 C-------DEA-LNRLL------VYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGL 616
DE LN +L VY + + A + + V++ + ++ R L
Sbjct: 86 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV------IYVKLYMYQLFRSL 139
Query: 617 VYLHEECNVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
Y+H + I H DIKPQN+LLD + K+ DFG +K L+ + + +R Y A
Sbjct: 140 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRA 194
Query: 676 PEW-FKNAPVSAKVDVYSFGVMLLEII 701
PE F ++ +DV+S G +L E++
Sbjct: 195 PELIFGATDYTSSIDVWSAGCVLAELL 221
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 512 ELGRGSFGIVYKGVL---KSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQ 567
+LG G FG V +G+ +AVK L + R ++ E+ + +H+++V+
Sbjct: 15 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 74
Query: 568 LLGFCDEALNR--LLVYEFMGNGTLANLIFAIPKPDWNLR--VRISLEIARGLVYLHEEC 623
G C++ + LV E++ G+L + + P+ L + + +I G+ YLH +
Sbjct: 75 YKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLHAQ- 130
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG--YVAPEWFKN 681
IH + +N+LLDN KI DFGL+K + G + APE K
Sbjct: 131 --HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 188
Query: 682 APVSAKVDVYSFGVMLLEII 701
DV+SFGV L E++
Sbjct: 189 CKFYYASDVWSFGVTLYELL 208
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 36/217 (16%)
Query: 513 LGRGSFGIVYKGVLKSASG---------KAIAVKKLDRLAQERE-REFKSEVSAIGRT-H 561
LG G+FG V VL A G +AVK L A E++ + SE+ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 562 HKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNL----------------R 605
HKN++ LLG C + ++ E+ G L + A P
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 606 VRISLEIARGLVYL-HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRT 663
V + ++ARG+ YL ++C IH D+ +N+L+ KI+DFGL++ + D +
Sbjct: 153 VSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 664 HTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
T R ++APE + + + DV+SFGV+L EI
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 62/297 (20%)
Query: 513 LGRGSFG-IVYKGVLKSASGKAIAVKKL-----DRLAQEREREFKSEVSAIGRTHHKNLV 566
LG GS G +V++G S G+ +AVK++ D E + +S+ H N++
Sbjct: 41 LGYGSSGTVVFQG---SFQGRPVAVKRMLIDFCDIALMEIKLLTESD-------DHPNVI 90
Query: 567 QLLGFCDEALNRLLVYEF-MGNGTLANLIFAIPKPDWNLRVR-----ISL--EIARGLVY 618
+ +C E +R L + N L +L+ + D NL+++ ISL +IA G+ +
Sbjct: 91 RY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 148
Query: 619 LHEECNVPIIHCDIKPQNILL--DNYFSAK-----------ISDFGLSKLLLSDQSRTHT 665
LH ++ IIH D+KPQNIL+ + F+A ISDFGL K L S Q
Sbjct: 149 LH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 666 MIR---GTRGYVAPEWFKNAP---VSAKVDVYSFGVMLLEIIC-CRRSVEMEVEEEGRAI 718
+ GT G+ APE + + ++ +D++S G + I+ + + E I
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 265
Query: 719 LTDWAYDCYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
++ D + + DRS + + + I DP KRPT VL+
Sbjct: 266 RGIFSLD-------------EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 35/207 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLVQLLGF 571
+G GSFG+VY+ L SG+ +A+KK+ +++ FK+ E+ + + H N+V+L F
Sbjct: 33 IGNGSFGVVYQAKL-CDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRYF 86
Query: 572 C-------DEA-LNRLL------VYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGL 616
DE LN +L VY + + A + + V++ + ++ R L
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV------IYVKLYMYQLFRSL 140
Query: 617 VYLHEECNVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
Y+H + I H DIKPQN+LLD + K+ DFG +K L+ + + +R Y A
Sbjct: 141 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRA 195
Query: 676 PEW-FKNAPVSAKVDVYSFGVMLLEII 701
PE F ++ +DV+S G +L E++
Sbjct: 196 PELIFGATDYTSSIDVWSAGCVLAELL 222
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 512 ELGRGSFGIVYKGVL---KSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQ 567
+LG G FG V +G+ +AVK L + R ++ E+ + +H+++V+
Sbjct: 16 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 75
Query: 568 LLGFCDEALNR--LLVYEFMGNGTLANLIFAIPKPDWNLR--VRISLEIARGLVYLHEEC 623
G C++ + LV E++ G+L + + P+ L + + +I G+ YLH +
Sbjct: 76 YKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLHAQ- 131
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG--YVAPEWFKN 681
IH + +N+LLDN KI DFGL+K + G + APE K
Sbjct: 132 --HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 189
Query: 682 APVSAKVDVYSFGVMLLEII 701
DV+SFGV L E++
Sbjct: 190 CKFYYASDVWSFGVTLYELL 209
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 142
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI D+GL++ HT T GYVA W++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDYGLAR---------HTDDEMT-GYVATRWYRAPE 192
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 35/207 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLVQLLGF 571
+G GSFG+VY+ L SG+ +A+KK+ +++ FK+ E+ + + H N+V+L F
Sbjct: 41 IGNGSFGVVYQAKL-CDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRYF 94
Query: 572 C-------DEA-LNRLL------VYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGL 616
DE LN +L VY + + A + + V++ + ++ R L
Sbjct: 95 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV------IYVKLYMYQLFRSL 148
Query: 617 VYLHEECNVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
Y+H + I H DIKPQN+LLD + K+ DFG +K L+ + + +R Y A
Sbjct: 149 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRA 203
Query: 676 PEW-FKNAPVSAKVDVYSFGVMLLEII 701
PE F ++ +DV+S G +L E++
Sbjct: 204 PELIFGATDYTSSIDVWSAGCVLAELL 230
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 21/202 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 142
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN-A 682
+ IIH D+KP N+ ++ KI DFGL++ + + TR Y APE N
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG----FVATRWYRAPEIMLNWM 198
Query: 683 PVSAKVDVYSFGVMLLEIICCR 704
+ VD++S G ++ E++ R
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL + Q +R ++ E+ + H+N++ LL
Sbjct: 42 VGSGAYGSVC-AAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 99
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 154
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DFGL++ HT T GYVA W++
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTDDEMT-GYVATRWYRAPE 204
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 106/211 (50%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L++ + M G L + + K + + ++ ++IA+G
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 133
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H G V
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVP 186
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELM 217
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 21/202 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 53 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 110
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 111 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 165
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN-A 682
+ IIH D+KP N+ ++ KI DFGL++ D+ + TR Y APE N
Sbjct: 166 SADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMXGYV---ATRWYRAPEIMLNWM 221
Query: 683 PVSAKVDVYSFGVMLLEIICCR 704
+ VD++S G ++ E++ R
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGR 243
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 106/211 (50%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L++ + M G L + + K + + ++ ++IA+G
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVRE-HKDNIGSQYLLNWCVQIAKG 130
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H G V
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVP 183
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELM 214
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 21/202 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 50 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 107
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 162
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN-A 682
+ IIH D+KP N+ ++ KI DFGL++ +D + TR Y APE N
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGXV--ATRWYRAPEIMLNWM 218
Query: 683 PVSAKVDVYSFGVMLLEIICCR 704
+ VD++S G ++ E++ R
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGR 240
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 21/202 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 142
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN-A 682
+ IIH D+KP N+ ++ KI DFGL++ + + TR Y APE N
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG----FVATRWYRAPEIMLNWM 198
Query: 683 PVSAKVDVYSFGVMLLEIICCR 704
+ VD++S G ++ E++ R
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 513 LGRGSFGIVYKGVLKSASGK----AIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
LG+G FG V + LK G A+ + K D +A EF E + + H ++ +L
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 569 LGFC--DEALNRL----LVYEFMGNGTLANLIFA--IPKPDWNL----RVRISLEIARGL 616
+G A RL ++ FM +G L + A I + +NL VR ++IA G+
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 617 VYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLS-DQSRTHTMIRGTRGYVA 675
YL IH D+ +N +L + ++DFGLS+ + S D R + ++A
Sbjct: 151 EYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA 207
Query: 676 PEWFKNAPVSAKVDVYSFGVMLLEII 701
E + + DV++FGV + EI+
Sbjct: 208 LESLADNLYTVHSDVWAFGVTMWEIM 233
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 106/211 (50%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L++ + M G L + + K + + ++ ++IA+G
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 130
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H G V
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVP 183
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELM 214
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 35/207 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLVQLLGF 571
+G GSFG+VY+ L SG+ +A+KK+ +++ FK+ E+ + + H N+V+L F
Sbjct: 28 IGNGSFGVVYQAKL-CDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 572 C-------DEA-LNRLL------VYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGL 616
DE LN +L VY + + A + + V++ + ++ R L
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV------IYVKLYMYQLFRSL 135
Query: 617 VYLHEECNVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
Y+H + I H DIKPQN+LLD + K+ DFG +K L+ + + +R Y A
Sbjct: 136 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRA 190
Query: 676 PEW-FKNAPVSAKVDVYSFGVMLLEII 701
PE F ++ +DV+S G +L E++
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 106/211 (50%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L++ + M G L + + K + + ++ ++IA+G
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 131
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H G V
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVP 184
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 106/211 (50%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L++ + M G L + + K + + ++ ++IA+G
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 132
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H G V
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVP 185
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELM 216
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 106/211 (50%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L++ + M G L + + K + + ++ ++IA+G
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 129
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H G V
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVP 182
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 109/217 (50%), Gaps = 21/217 (9%)
Query: 495 RFFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE-----RE 549
R F EL++ + LG G FG V+KGV G++I + ++ +++ +
Sbjct: 26 RIFKETELRKL-----KVLGSGVFGTVHKGVW-IPEGESIKIPVCIKVIEDKSGRQSFQA 79
Query: 550 FKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIF---AIPKPDWNLRV 606
+ AIG H ++V+LLG C + + LV +++ G+L + + P L +
Sbjct: 80 VTDHMLAIGSLDHAHIVRLLGLCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGP--QLLL 136
Query: 607 RISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSR-THT 665
++IA+G+ YL E ++H ++ +N+LL + +++DFG++ LL D + ++
Sbjct: 137 NWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYS 193
Query: 666 MIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIIC 702
+ ++A E + + DV+S+GV + E++
Sbjct: 194 EAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 31/216 (14%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQLLGF 571
LGRG FG+V++ K A+K++ +E RE EV A+ + H +V+
Sbjct: 13 LGRGGFGVVFEAKNK-VDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNA 71
Query: 572 -----CDEALN----RLLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLEIARGL 616
E L ++ +Y M NL I + + ++ + I L+IA +
Sbjct: 72 WLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAV 131
Query: 617 VYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRT-----------HT 665
+LH + ++H D+KP NI K+ DFGL + D+ HT
Sbjct: 132 EFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHT 188
Query: 666 MIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEII 701
GT+ Y++PE S KVD++S G++L E++
Sbjct: 189 GQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 17/197 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR--LAQEREREFKSEVSAIGRTHHKNLVQLLG 570
+G+G+F V K +GK +AVK +D+ L ++ EV + +H N+V+L
Sbjct: 22 IGKGNFAKV-KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 571 FCDEALNRLLVYEFMGNGTLANLIFA---IPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
+ LV E+ G + + + A + + + + R +I + Y H++ I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF---I 134
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLS-KLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSA 686
+H D+K +N+LLD + KI+DFG S + ++ G Y APE F+
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFC---GAPPYAAPELFQGKKYDG 191
Query: 687 -KVDVYSFGVMLLEIIC 702
+VDV+S GV+L ++
Sbjct: 192 PEVDVWSLGVILYTLVS 208
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 37 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 96
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L+ + M G L + + K + + ++ ++IA+G
Sbjct: 97 ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 154
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H G V
Sbjct: 155 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVP 207
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 208 IKWMALESILHRIYTHQSDVWSYGVTVWELM 238
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 122/282 (43%), Gaps = 37/282 (13%)
Query: 512 ELGRGSFGIVY--KGVLKSASGKAIAVKKLD---RLAQEREREFKSEVSAIGRTHHKNLV 566
E+G GSFG VY + V S + +A+KK+ + + E+ ++ EV + + H N +
Sbjct: 61 EIGHGSFGAVYFARDVRNS---EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTI 117
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVR-ISLEIARGLVYLHEECNV 625
Q G LV E+ G+ ++L+ KP + + ++ +GL YLH
Sbjct: 118 QYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN-- 174
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE---WFKNA 682
+IH D+K NILL K+ DFG + ++ GT ++APE
Sbjct: 175 -MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-----NXFVGTPYWMAPEVILAMDEG 228
Query: 683 PVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPA 742
KVDV+S G+ +E+ + + ++ A L + ++ PA
Sbjct: 229 QYDGKVDVWSLGITCIELAERKPPL----------------FNMNAMSALYHIAQNESPA 272
Query: 743 MADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVP 784
+ + + C+++ P RPT +V+L+ L E P
Sbjct: 273 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 314
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 22 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 81
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L+ + M G L + + K + + ++ ++IA+G
Sbjct: 82 ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 139
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H G V
Sbjct: 140 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVP 192
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTVWELM 223
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L+ + M G L + + K + + ++ ++IA+G
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVRE-HKDNIGSQYLLNWCVQIAKG 129
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H G V
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVP 182
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L+ + M G L + + K + + ++ ++IA+G
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 131
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H G V
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVP 184
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L+ + M G L + + K + + ++ ++IA+G
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 132
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H G V
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVP 185
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELM 216
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 112/217 (51%), Gaps = 21/217 (9%)
Query: 495 RFFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE--REFKS 552
R F EL++ + LG G FG V+KGV G++I + ++ +++ + F++
Sbjct: 8 RIFKETELRKL-----KVLGSGVFGTVHKGVW-IPEGESIKIPVCIKVIEDKSGRQSFQA 61
Query: 553 ---EVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIF---AIPKPDWNLRV 606
+ AIG H ++V+LLG C + + LV +++ G+L + + P L +
Sbjct: 62 VTDHMLAIGSLDHAHIVRLLGLCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGP--QLLL 118
Query: 607 RISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSR-THT 665
++IA+G+ YL E ++H ++ +N+LL + +++DFG++ LL D + ++
Sbjct: 119 NWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYS 175
Query: 666 MIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIIC 702
+ ++A E + + DV+S+GV + E++
Sbjct: 176 EAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 21/202 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 26 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 83
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 138
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN-A 682
+ IIH D+KP N+ ++ KI DFGL++ + + TR Y APE N
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG----FVATRWYRAPEIMLNWM 194
Query: 683 PVSAKVDVYSFGVMLLEIICCR 704
+ VD++S G ++ E++ R
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 15/196 (7%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR--LAQEREREFKSEVSAIGRTHHKNLVQLLG 570
+G+G+F V K +GK +AV+ +D+ L ++ EV + +H N+V+L
Sbjct: 22 IGKGNFAKV-KLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 571 FCDEALNRLLVYEFMGNGTLANLIFA---IPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
+ LV E+ G + + + A + + + + R +I + Y H++ I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF---I 134
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSA- 686
+H D+K +N+LLD + KI+DFG S G+ Y APE F+
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFC--GSPPYAAPELFQGKKYDGP 192
Query: 687 KVDVYSFGVMLLEIIC 702
+VDV+S GV+L ++
Sbjct: 193 EVDVWSLGVILYTLVS 208
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L+ + M G L + + K + + ++ ++IA+G
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 132
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H G V
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVP 185
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELM 216
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L+ + M G L + + K + + ++ ++IA+G
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 132
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H G V
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVP 185
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELM 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 25/219 (11%)
Query: 494 LRFFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQERERE 549
LR E K+ + LG G+FG VYKG+ K +A+K+L + + + +E
Sbjct: 16 LRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 70
Query: 550 FKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS 609
E + + ++ +LLG C + +L+ + M G L + + K + + ++
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE-HKDNIGSQYLLN 128
Query: 610 --LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMI 667
++IA+G+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H
Sbjct: 129 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH--- 182
Query: 668 RGTRGYVAPEWFKNAPVSAKV-----DVYSFGVMLLEII 701
G V +W + ++ DV+S+GV + E++
Sbjct: 183 -AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L+ + M G L + + K + + ++ ++IA+G
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 129
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H G V
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVP 182
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 65
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L+ + M G L + + K + + ++ ++IA+G
Sbjct: 66 ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 123
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H G V
Sbjct: 124 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVP 176
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELM 207
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 18 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 77
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L+ + M G L + + K + + ++ ++IA+G
Sbjct: 78 ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 135
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H G V
Sbjct: 136 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVP 188
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 189 IKWMALESILHRIYTHQSDVWSYGVTVWELM 219
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 25/219 (11%)
Query: 494 LRFFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQERERE 549
LR E K+ + LG G+FG VYKG+ K +A+K+L + + + +E
Sbjct: 9 LRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 550 FKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS 609
E + + ++ +LLG C + +L+ + M G L + + K + + ++
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE-HKDNIGSQYLLN 121
Query: 610 --LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMI 667
++IA+G+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H
Sbjct: 122 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH--- 175
Query: 668 RGTRGYVAPEWFKNAPVSAKV-----DVYSFGVMLLEII 701
G V +W + ++ DV+S+GV + E++
Sbjct: 176 -AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 35/207 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS-EVSAIGRTHHKNLVQLLGF 571
+G GSFG+VY+ L SG+ +A+KK+ +++ FK+ E+ + + H N+V+L F
Sbjct: 28 IGNGSFGVVYQAKL-CDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 572 CDEA--------LNRLL------VYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGL 616
+ LN +L VY + + A + + V++ + ++ R L
Sbjct: 82 FYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPV------IYVKLYMYQLFRSL 135
Query: 617 VYLHEECNVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
Y+H + I H DIKPQN+LLD + K+ DFG +K L+ + + +R Y A
Sbjct: 136 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRA 190
Query: 676 PEW-FKNAPVSAKVDVYSFGVMLLEII 701
PE F ++ +DV+S G +L E++
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 116/269 (43%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKL---DRLAQEREREFKSEVSAIGRT-HHKNLVQL 568
LG+G F ++ + A K + K+ L + +RE S +I R+ H+++V
Sbjct: 25 LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIF---AIPKPDWNLRVRISLEIARGLVYLHEECNV 625
GF ++ +V E +L L A+ +P+ +R +I G YLH
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR---QIVLGCQYLHRN--- 136
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+IH D+K N+ L+ KI DFGL+ + D R T+ GT Y+APE S
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC-GTPNYIAPEVLSKKGHS 195
Query: 686 AKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAMAD 745
+VDV+S G ++ ++ + E +E + Y + P A
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS---------IPKHINPVAA- 245
Query: 746 RSRLQKWLMIAMWCIREDPSKRPTMKVVL 774
S +QK L + DP+ RPT+ +L
Sbjct: 246 -SLIQKML-------QTDPTARPTINELL 266
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 33/211 (15%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDR--------LAQEREREFKSEVSAIGRTHH 562
E +G+G+F +V + + +G+ AVK +D L+ E + K E S H
Sbjct: 30 EVIGKGAFSVVRR-CINRETGQQFAVKIVDVAKFTSSPGLSTE---DLKREASICHMLKH 85
Query: 563 KNLVQLLGFCDEALNRLLVYEFMGNGTL---------ANLIFAIPKPDWNLRVRISLEIA 613
++V+LL +V+EFM L A +++ +R +I
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR-----QIL 140
Query: 614 RGLVYLHEECNVPIIHCDIKPQNILL---DNYFSAKISDFGLSKLLLSDQSRTHTMIRGT 670
L Y H+ IIH D+KP+N+LL +N K+ DFG++ + L + GT
Sbjct: 141 EALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGLVAGGRVGT 196
Query: 671 RGYVAPEWFKNAPVSAKVDVYSFGVMLLEII 701
++APE K P VDV+ GV+L ++
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILL 227
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 33/280 (11%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLD---RLAQEREREFKSEVSAIGRTHHKNLVQL 568
E+G GSFG VY + + +A+KK+ + + E+ ++ EV + + H N +Q
Sbjct: 22 EIGHGSFGAVYFA-RDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVR-ISLEIARGLVYLHEECNVPI 627
G LV E+ G+ ++L+ KP + + ++ +GL YLH +
Sbjct: 81 RGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---M 136
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE---WFKNAPV 684
IH D+K NILL K+ DFG + ++ GT ++APE
Sbjct: 137 IHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-----NXFVGTPYWMAPEVILAMDEGQY 191
Query: 685 SAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAMA 744
KVDV+S G+ +E+ + + ++ A L + ++ PA+
Sbjct: 192 DGKVDVWSLGITCIELAERKPPL----------------FNMNAMSALYHIAQNESPALQ 235
Query: 745 DRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVP 784
+ + C+++ P RPT +V+L+ L E P
Sbjct: 236 SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 275
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 116/269 (43%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKL---DRLAQEREREFKSEVSAIGRT-HHKNLVQL 568
LG+G F ++ + A K + K+ L + +RE S +I R+ H+++V
Sbjct: 25 LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIF---AIPKPDWNLRVRISLEIARGLVYLHEECNV 625
GF ++ +V E +L L A+ +P+ +R +I G YLH
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR---QIVLGCQYLHRN--- 136
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+IH D+K N+ L+ KI DFGL+ + D R T+ GT Y+APE S
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC-GTPNYIAPEVLSKKGHS 195
Query: 686 AKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAMAD 745
+VDV+S G ++ ++ + E +E + Y + P A
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS---------IPKHINPVAA- 245
Query: 746 RSRLQKWLMIAMWCIREDPSKRPTMKVVL 774
S +QK L + DP+ RPT+ +L
Sbjct: 246 -SLIQKML-------QTDPTARPTINELL 266
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 116/269 (43%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKL---DRLAQEREREFKSEVSAIGRT-HHKNLVQL 568
LG+G F ++ + A K + K+ L + +RE S +I R+ H+++V
Sbjct: 29 LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 86
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIF---AIPKPDWNLRVRISLEIARGLVYLHEECNV 625
GF ++ +V E +L L A+ +P+ +R +I G YLH
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR---QIVLGCQYLHRN--- 140
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+IH D+K N+ L+ KI DFGL+ + D R T+ GT Y+APE S
Sbjct: 141 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC-GTPNYIAPEVLSKKGHS 199
Query: 686 AKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAMAD 745
+VDV+S G ++ ++ + E +E + Y + P A
Sbjct: 200 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS---------IPKHINPVAA- 249
Query: 746 RSRLQKWLMIAMWCIREDPSKRPTMKVVL 774
S +QK L + DP+ RPT+ +L
Sbjct: 250 -SLIQKML-------QTDPTARPTINELL 270
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 33/206 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
+G GSFG+VY+ L SG+ +A+KK+ + + RE + + + H N+V+L F
Sbjct: 28 IGNGSFGVVYQAKL-CDSGELVAIKKVLQGKAFKNRELQ----IMRKLDHCNIVRLRYFF 82
Query: 573 -------DEA-LNRLL------VYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLV 617
DE LN +L VY + + A + + V++ + ++ R L
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPV------IYVKLYMYQLFRSLA 136
Query: 618 YLHEECNVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAP 676
Y+H + I H DIKPQN+LLD + K+ DFG +K L+ + + +R Y AP
Sbjct: 137 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAP 191
Query: 677 EW-FKNAPVSAKVDVYSFGVMLLEII 701
E F ++ +DV+S G +L E++
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 28/212 (13%)
Query: 510 KEELGRGSFGIVYKGVLKSASGKAIAVKKLD-----RLAQEREREFKS----EVSAIGRT 560
KE LGRG +V + + K + K AVK +D + E +E + EV + +
Sbjct: 9 KEILGRGVSSVVRRCIHK-PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 67
Query: 561 H-HKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNLRVRISLEIARGL 616
H N++QL + LV++ M G L + + + + + +R LE+ L
Sbjct: 68 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICAL 127
Query: 617 VYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAP 676
L+ I+H D+KP+NILLD+ + K++DFG S L D + GT Y+AP
Sbjct: 128 HKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLREVCGTPSYLAP 179
Query: 677 EWFK-----NAPVSAK-VDVYSFGVMLLEIIC 702
E + N P K VD++S GV++ ++
Sbjct: 180 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 211
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 91/194 (46%), Gaps = 14/194 (7%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LGRGSFG V++ + +G AVKK+ RL R E V+ G + + +V L G
Sbjct: 80 LGRGSFGEVHR-MKDKQTGFQCAVKKV-RLEVFRVEEL---VACAGLSSPR-IVPLYGAV 133
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDI 632
E + E + G+L LI + + + + GL YLH I+H D+
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDV 190
Query: 633 KPQNILLDNYFS-AKISDFGLSKLL----LSDQSRTHTMIRGTRGYVAPEWFKNAPVSAK 687
K N+LL + S A + DFG + L L T I GT ++APE P AK
Sbjct: 191 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 250
Query: 688 VDVYSFGVMLLEII 701
VD++S M+L ++
Sbjct: 251 VDIWSSCCMMLHML 264
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 34/224 (15%)
Query: 504 EATGGF------KEELGRGSFGIVYKGVLKSASGKAIAVKKLD-----RLAQEREREFKS 552
+T GF KE LGRG +V + + K + K AVK +D + E +E +
Sbjct: 10 HSTHGFYENYEPKEILGRGVSSVVRRCIHK-PTCKEYAVKIIDVTGGGSFSAEEVQELRE 68
Query: 553 ----EVSAIGRTH-HKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNL 604
EV + + H N++QL + LV++ M G L + + + + +
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 605 RVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTH 664
+R LE+ L L+ I+H D+KP+NILLD+ + K++DFG S L D
Sbjct: 129 IMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKL 180
Query: 665 TMIRGTRGYVAPEWFK-----NAPVSAK-VDVYSFGVMLLEIIC 702
+ GT Y+APE + N P K VD++S GV++ ++
Sbjct: 181 RSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 142
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI DF L++ HT T GYVA W++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFYLAR---------HTDDEMT-GYVATRWYRAPE 192
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y VL + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 32 IGSGAQGIVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + LV E M ANL I + R+ L ++ G+ +LH
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD----ANLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S T TR Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 34/224 (15%)
Query: 504 EATGGF------KEELGRGSFGIVYKGVLKSASGKAIAVKKLD-----RLAQEREREFKS 552
+T GF KE LGRG +V + + K + K AVK +D + E +E +
Sbjct: 10 HSTHGFYENYEPKEILGRGVSSVVRRCIHK-PTCKEYAVKIIDVTGGGSFSAEEVQELRE 68
Query: 553 ----EVSAIGRTH-HKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI---FAIPKPDWNL 604
EV + + H N++QL + LV++ M G L + + + + +
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 605 RVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTH 664
+R LE+ L L+ I+H D+KP+NILLD+ + K++DFG S L D
Sbjct: 129 IMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKL 180
Query: 665 TMIRGTRGYVAPEWFK-----NAPVSAK-VDVYSFGVMLLEIIC 702
+ GT Y+APE + N P K VD++S GV++ ++
Sbjct: 181 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS----EVSAIGRTHHKNLVQ 567
++G GS+G+V+K +G+ +A+KK L E + K E+ + + H NLV
Sbjct: 10 KIGEGSYGVVFK-CRNRDTGQIVAIKKF--LESEDDPVIKKIALREIRMLKQLKHPNLVN 66
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEE-CNVP 626
LL LV+E+ + L L +L I+ + + + + H+ C
Sbjct: 67 LLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC--- 123
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF-KNAPVS 685
IH D+KP+NIL+ + K+ DFG ++LL + TR Y +PE +
Sbjct: 124 -IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATRWYRSPELLVGDTQYG 181
Query: 686 AKVDVYSFGVMLLEII 701
VDV++ G + E++
Sbjct: 182 PPVDVWAIGCVFAELL 197
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 33/206 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
+G GSFG+VY+ L SG+ +A+KK+ + + RE + + + H N+V+L F
Sbjct: 28 IGNGSFGVVYQAKL-CDSGELVAIKKVLQGKAFKNRELQ----IMRKLDHCNIVRLRYFF 82
Query: 573 -------DEA-LNRLL------VYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLV 617
DE LN +L VY + + A + + V++ + ++ R L
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV------IYVKLYMYQLFRSLA 136
Query: 618 YLHEECNVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAP 676
Y+H + I H DIKPQN+LLD + K+ DFG +K L+ + + +R Y AP
Sbjct: 137 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAP 191
Query: 677 EW-FKNAPVSAKVDVYSFGVMLLEII 701
E F ++ +DV+S G +L E++
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 33/206 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
+G GSFG+VY+ L SG+ +A+KK+ + + RE + + + H N+V+L F
Sbjct: 28 IGNGSFGVVYQAKL-CDSGELVAIKKVLQGKAFKNRELQ----IMRKLDHCNIVRLRYFF 82
Query: 573 -------DEA-LNRLL------VYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLV 617
DE LN +L VY + + A + + V++ + ++ R L
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV------IYVKLYMYQLFRSLA 136
Query: 618 YLHEECNVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAP 676
Y+H + I H DIKPQN+LLD + K+ DFG +K L+ + + +R Y AP
Sbjct: 137 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAP 191
Query: 677 EW-FKNAPVSAKVDVYSFGVMLLEII 701
E F ++ +DV+S G +L E++
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 104/211 (49%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 9 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 68
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L+ + M G L + + K + + ++ ++IA G
Sbjct: 69 ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAEG 126
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H G V
Sbjct: 127 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVP 179
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWELM 210
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 108/232 (46%), Gaps = 37/232 (15%)
Query: 487 SSTSETNLRFFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRL 542
++ ++ LR EL++ + LG G+FG VYKG+ +A+K L +
Sbjct: 4 AAPNQALLRILKETELRKV-----KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT 58
Query: 543 AQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDW 602
+ + +E E + + +LLG C + +L V + M G L + +
Sbjct: 59 SPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVR------- 110
Query: 603 NLRVRIS--------LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 654
R R+ ++IA+G+ YL +V ++H D+ +N+L+ + KI+DFGL++
Sbjct: 111 ENRGRLGSQDLLNWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLAR 167
Query: 655 LLLSDQSRTHTMIRGTRGYVAPEWFKNAPV-----SAKVDVYSFGVMLLEII 701
LL D++ H G V +W + + + DV+S+GV + E++
Sbjct: 168 LLDIDETEYH----ADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELM 215
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 142
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI FGL++ HT T GYVA W++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILGFGLAR---------HTDDEMT-GYVATRWYRAPE 192
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 134/301 (44%), Gaps = 66/301 (21%)
Query: 513 LGRGSFG-IVYKGVLKSASGKAIAVKKL-----DRLAQEREREFKSEVSAIGRTHHKNLV 566
LG GS G +V++G S G+ +AVK++ D E + +S+ H N++
Sbjct: 23 LGYGSSGTVVFQG---SFQGRPVAVKRMLIDFCDIALMEIKLLTESD-------DHPNVI 72
Query: 567 QLLGFCDEALNRLLVYEF-MGNGTLANLIFAIPKPDWNLRVR-----ISL--EIARGLVY 618
+ +C E +R L + N L +L+ + D NL+++ ISL +IA G+ +
Sbjct: 73 RY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 619 LHEECNVPIIHCDIKPQNILL--DNYFSAK-----------ISDFGLSKLLLSDQSRTHT 665
LH ++ IIH D+KPQNIL+ + F+A ISDFGL K L S Q
Sbjct: 131 LH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 187
Query: 666 MIR---GTRGYVAPEWFKNA-------PVSAKVDVYSFGVMLLEIIC-CRRSVEMEVEEE 714
+ GT G+ APE + + ++ +D++S G + I+ + + E
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247
Query: 715 GRAILTDWAYDCYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVL 774
I ++ D + + DRS + + + I DP KRPT VL
Sbjct: 248 SNIIRGIFSLD-------------EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL 294
Query: 775 Q 775
+
Sbjct: 295 R 295
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 142
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI D GL++ HT T GYVA W++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDAGLAR---------HTDDEMT-GYVATRWYRAPE 192
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 11/194 (5%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR--LAQEREREFKSEVSAIGRTHHKNLVQLLG 570
+G+G+F V K +GK +AVK +D+ L ++ EV +H N+V+L
Sbjct: 22 IGKGNFAKV-KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFE 80
Query: 571 FCDEALNRLLVYEFMGNGTLANLIFAIPK-PDWNLRVRISLEIARGLVYLHEECNVPIIH 629
+ LV E+ G + + + A + + R + +I + Y H++ I+H
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF---IVH 136
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSA-KV 688
D+K +N+LLD + KI+DFG S G Y APE F+ +V
Sbjct: 137 RDLKAENLLLDADXNIKIADFGFSNEFTFGNKL--DAFCGAPPYAAPELFQGKKYDGPEV 194
Query: 689 DVYSFGVMLLEIIC 702
DV+S GV+L ++
Sbjct: 195 DVWSLGVILYTLVS 208
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 11/194 (5%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG V ++ A+GK A KKL++ ++ E +E + + + + +V L
Sbjct: 192 LGKGGFGEVCACQVR-ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 250
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDW--NLRVRISLEIARGLVYLHEECNVPI 627
+ LV M G L I+ + + + V + EI GL LH E I
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RI 307
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAK 687
++ D+KP+NILLD++ +ISD GL+ + Q+ + GT GY+APE KN +
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV--GTVGYMAPEVVKNERYTFS 365
Query: 688 VDVYSFGVMLLEII 701
D ++ G +L E+I
Sbjct: 366 PDWWALGCLLYEMI 379
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 32/205 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGR-THHKNLVQLLGF 571
+G GSFG+V++ K +A+KK+ +++ FK+ I R H N+V L F
Sbjct: 48 IGNGSFGVVFQA--KLVESDEVAIKKV-----LQDKRFKNRELQIMRIVKHPNVVDLKAF 100
Query: 572 C-------DEA-LNRLLVYE----FMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVY 618
DE LN +L Y + + A L +P L +++ + ++ R L Y
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPM----LLIKLYMYQLLRSLAY 156
Query: 619 LHEECNVPIIHCDIKPQNILLDNYFSA-KISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE 677
+H ++ I H DIKPQN+LLD K+ DFG +K+L++ + + +R Y APE
Sbjct: 157 IH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC--SRYYRAPE 211
Query: 678 W-FKNAPVSAKVDVYSFGVMLLEII 701
F + +D++S G ++ E++
Sbjct: 212 LIFGATNYTTNIDIWSTGCVMAELM 236
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERERE---FKSEVSAIGRTHHKNLVQLL 569
+GRG+FG V + V AS K A+K L + + + F E + + +VQL
Sbjct: 83 IGRGAFGEV-QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 141
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
+ +V E+M G L NL+ P+ + + E+ L +H ++ +IH
Sbjct: 142 CAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTA-EVVLALDAIH---SMGLIH 197
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTH-TMIRGTRGYVAPEWFK----NAPV 684
D+KP N+LLD + K++DFG + + + + H GT Y++PE K +
Sbjct: 198 RDVKPDNMLLDKHGHLKLADFG-TCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYY 256
Query: 685 SAKVDVYSFGVMLLEIIC 702
+ D +S GV L E++
Sbjct: 257 GRECDWWSVGVFLFEMLV 274
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 14/193 (7%)
Query: 510 KEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGR-THHKNLVQL 568
KE++G GS+ + + + K A+ AVK +D+ +R+ E+ + R H N++ L
Sbjct: 27 KEDIGVGSYSVCKRCIHK-ATNXEFAVKIIDK----SKRDPTEEIEILLRYGQHPNIITL 81
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
D+ +V E G L + I + I + + YLH + ++
Sbjct: 82 KDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG---VV 138
Query: 629 HCDIKPQNILL----DNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
H D+KP NIL N S +I DFG +K L ++ T T +VAPE +
Sbjct: 139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TANFVAPEVLERQGY 197
Query: 685 SAKVDVYSFGVML 697
A D++S GV+L
Sbjct: 198 DAACDIWSLGVLL 210
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y +L+ + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 32 IGSGAQGIVCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + +V E M ANL I + R+ L ++ G+ +LH
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD----ANLSQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + T ++ TR Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV--TRYYRAPEVIL 198
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S GV++ E+I
Sbjct: 199 GMGYKENVDIWSVGVIMGEMI 219
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 27/227 (11%)
Query: 483 NVQDSSTSETNLRFFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRL 542
+VQ + ++ T L+ Y +LK +G G+ GIV + G +AVKKL R
Sbjct: 10 SVQVADSTFTVLK--RYQQLKP--------IGSGAQGIVC-AAFDTVLGINVAVKKLSRP 58
Query: 543 AQEREREFKS--EVSAIGRTHHKNLVQLLGF------CDEALNRLLVYEFMGNGTLANLI 594
Q + ++ E+ + +HKN++ LL +E + LV E M + L +I
Sbjct: 59 FQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI 117
Query: 595 FAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 654
+ D + ++ G+ +LH + IIH D+KP NI++ + + KI DFGL++
Sbjct: 118 HM--ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 172
Query: 655 LLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEII 701
++ T ++ TR Y APE VD++S G ++ E++
Sbjct: 173 TASTNFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMGELV 217
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 142
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI D GL++ HT T GYVA W++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDRGLAR---------HTDDEMT-GYVATRWYRAPE 192
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 102/204 (50%), Gaps = 30/204 (14%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK-SEVSAIGRTHHKNLVQLLGF 571
LG+G+ V++G K +G A+K + ++ R + + E + + +HKN+V+L
Sbjct: 17 LGQGATANVFRGRHKK-TGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 572 CDEALNR--LLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E R +L+ EF G+L ++ + +P+ ++ + +R ++ G+ +L E
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLR---DVVGGMNHLRENG 132
Query: 624 NVPIIHCDIKPQNILL----DNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF 679
I+H +IKP NI+ D K++DFG ++ L D+ + GT Y+ P+ +
Sbjct: 133 ---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVXLYGTEEYLHPDMY 187
Query: 680 KNAPV--------SAKVDVYSFGV 695
+ A + A VD++S GV
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGV 211
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 25/202 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y +L+ + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 26 IGSGAQGIVCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 81
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + +V E M ANL I + R+ L ++ G+ +LH
Sbjct: 82 LLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S T TR Y APE
Sbjct: 138 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 192
Query: 681 NAPVSAKVDVYSFGVMLLEIIC 702
VD++S G ++ E++C
Sbjct: 193 GMGYKENVDLWSVGCIMGEMVC 214
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y +L+ + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 32 IGSGAQGIVVAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + +V E M ANL I + R+ L ++ G+ +LH
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD----ANLSQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S T TR Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S GV++ E+I
Sbjct: 199 GMGYKENVDIWSVGVIMGEMI 219
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 25/202 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y +L+ + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 37 IGSGAQGIVCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 92
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + +V E M ANL I + R+ L ++ G+ +LH
Sbjct: 93 LLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKHLH 148
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S T TR Y APE
Sbjct: 149 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 203
Query: 681 NAPVSAKVDVYSFGVMLLEIIC 702
VD++S G ++ E++C
Sbjct: 204 GMGYKENVDLWSVGCIMGEMVC 225
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQLL 569
LG+G FG V ++ A+GK A KKL++ ++ E +E + + + + +V L
Sbjct: 192 LGKGGFGEVCACQVR-ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL- 249
Query: 570 GFCDEALNRL-LVYEFMGNGTLANLIFAIPKPDW--NLRVRISLEIARGLVYLHEECNVP 626
+ E + L LV M G L I+ + + + V + EI GL LH E
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---R 306
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSA 686
I++ D+KP+NILLD++ +ISD GL+ + Q+ + GT GY+APE KN +
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV--GTVGYMAPEVVKNERYTF 364
Query: 687 KVDVYSFGVMLLEII 701
D ++ G +L E+I
Sbjct: 365 SPDWWALGCLLYEMI 379
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y VL + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 32 IGSGAQGIVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + LV E M ANL I + R+ L ++ G+ +LH
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD----ANLXQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S T TR Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + L G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L++ + M G L + + K + + ++ ++IA+G
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 136
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H G V
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVP 189
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELM 220
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 33/208 (15%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQ---EREREFKSEVSAIGRTHHKNLVQLL 569
+G G++G V + +G +AVKKL R Q +R ++ E+ + H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 570 GF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E + LV MG L N++ D +++ I +I RGL Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH--- 142
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
+ IIH D+KP N+ ++ KI D GL++ HT T GYVA W++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDGGLAR---------HTDDEMT-GYVATRWYRAPE 192
Query: 684 V-------SAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ R
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 132/286 (46%), Gaps = 45/286 (15%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVK--KLDRLAQEREREFKSEVSAIGRTHHKNLV 566
F +L G ++KG + G I VK K+ + + R+F E + H N++
Sbjct: 14 FLTKLNENHSGELWKGRWQ---GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVL 70
Query: 567 QLLGFCDE--ALNRLLVYEFMGNGTLANLI-----FAIPKPDWNLRVRISLEIARGLVYL 619
+LG C A + L+ +M G+L N++ F + D + V+ +L++ARG+ +L
Sbjct: 71 PVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVV---DQSQAVKFALDMARGMAFL 127
Query: 620 HE-ECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
H E +P + +++++D +A+IS ++ + S QS +VAPE
Sbjct: 128 HTLEPLIP--RHALNSRSVMIDEDMTARIS---MADVKFSFQSPGRMY---APAWVAPEA 179
Query: 679 FKNAPVSA---KVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVL 735
+ P D++SF V+L E++ E A L++ + + L+ L
Sbjct: 180 LQKKPEDTNRRSADMWSFAVLLWELVT---------REVPFADLSN--MEIGMKVALEGL 228
Query: 736 VDSDEPAMADR-SRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGL 780
+ P ++ S+L K C+ EDP+KRP +++ +LE +
Sbjct: 229 RPTIPPGISPHVSKLMK------ICMNEDPAKRPKFDMIVPILEKM 268
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L++ + M G L + + K + + ++ ++IA+G
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 133
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFG +KLL +++ H G V
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH----AEGGKVP 186
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELM 217
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y VL + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 32 IGSGAQGIVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + LV E M ANL I + R+ L ++ G+ +LH
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD----ANLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S T TR Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y VL + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 25 IGSGAQGIVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + LV E M ANL I + R+ L ++ G+ +LH
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMD----ANLXQVIQMELDHERMSYLLYQMLXGIKHLH 136
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S T TR Y APE
Sbjct: 137 ---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 191
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E++
Sbjct: 192 GMGYKENVDIWSVGCIMGEMV 212
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 513 LGRGSFGIVYKGVLKSASG-KAIAVKKLDRLAQEREREF-KSEVSAIGRTHHKNLVQLLG 570
+GRGS+ V LK A+ V K + + + + ++ ++E + + + L
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 571 FCDEALNRLL-VYEFMGNGTLANLIFAIPK----PDWNLRVRISLEIARGLVYLHEECNV 625
C + +RL V E++ G +L+F + + P+ + R S EI+ L YLHE
Sbjct: 120 SCFQTESRLFFVIEYVNGG---DLMFHMQRQRKLPEEHARF-YSAEISLALNYLHERG-- 173
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
II+ D+K N+LLD+ K++D+G+ K L T T GT Y+APE +
Sbjct: 174 -IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC-GTPNYIAPEILRGEDYG 231
Query: 686 AKVDVYSFGVMLLEIICCR 704
VD ++ GV++ E++ R
Sbjct: 232 FSVDWWALGVLMFEMMAGR 250
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 14/194 (7%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
+GRGSFG V++ + +G AVKK+ RL R E V+ G + + +V L G
Sbjct: 66 VGRGSFGEVHR-MKDKQTGFQCAVKKV-RLEVFRVEEL---VACAGLSSPR-IVPLYGAV 119
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDI 632
E + E + G+L LI + + + + GL YLH I+H D+
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDV 176
Query: 633 KPQNILLDNYFS-AKISDFGLSKLL----LSDQSRTHTMIRGTRGYVAPEWFKNAPVSAK 687
K N+LL + S A + DFG + L L T I GT ++APE P AK
Sbjct: 177 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 236
Query: 688 VDVYSFGVMLLEII 701
VD++S M+L ++
Sbjct: 237 VDIWSSCCMMLHML 250
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + L G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 12 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L+ + M G L + + K + + ++ ++IA+G
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 129
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H G V
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVP 182
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L++ + M G L + + K + + ++ ++IA+G
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 131
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFG +KLL +++ H G V
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH----AEGGKVP 184
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L++ + M G L + + K + + ++ ++IA+G
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 131
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFG +KLL +++ H G V
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH----AEGGKVP 184
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y VL + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 32 IGSGAQGIVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + LV E M ANL I + R+ L ++ G+ +LH
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S T TR Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 115/269 (42%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKL---DRLAQEREREFKSEVSAIGRT-HHKNLVQL 568
LG+G F ++ + A K + K+ L + +RE S +I R+ H+++V
Sbjct: 49 LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 106
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIF---AIPKPDWNLRVRISLEIARGLVYLHEECNV 625
GF ++ +V E +L L A+ +P+ +R +I G YLH
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR---QIVLGCQYLHRNR-- 161
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+IH D+K N+ L+ KI DFGL+ + D R + GT Y+APE S
Sbjct: 162 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC-GTPNYIAPEVLSKKGHS 219
Query: 686 AKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAMAD 745
+VDV+S G ++ ++ + E +E + Y + P A
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS---------IPKHINPVAA- 269
Query: 746 RSRLQKWLMIAMWCIREDPSKRPTMKVVL 774
S +QK L + DP+ RPT+ +L
Sbjct: 270 -SLIQKML-------QTDPTARPTINELL 290
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y VL + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 70 IGSGAQGIVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + LV E M ANL I + R+ L ++ G+ +LH
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKHLH 181
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S T TR Y APE
Sbjct: 182 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 236
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E++
Sbjct: 237 GMGYKENVDIWSVGCIMGEMV 257
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 115/269 (42%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKL---DRLAQEREREFKSEVSAIGRT-HHKNLVQL 568
LG+G F ++ + A K + K+ L + +RE S +I R+ H+++V
Sbjct: 47 LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 104
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIF---AIPKPDWNLRVRISLEIARGLVYLHEECNV 625
GF ++ +V E +L L A+ +P+ +R +I G YLH
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR---QIVLGCQYLHRN--- 158
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+IH D+K N+ L+ KI DFGL+ + D R + GT Y+APE S
Sbjct: 159 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC-GTPNYIAPEVLSKKGHS 217
Query: 686 AKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAMAD 745
+VDV+S G ++ ++ + E +E + Y + P A
Sbjct: 218 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS---------IPKHINPVAA- 267
Query: 746 RSRLQKWLMIAMWCIREDPSKRPTMKVVL 774
S +QK L + DP+ RPT+ +L
Sbjct: 268 -SLIQKML-------QTDPTARPTINELL 288
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Query: 580 LVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILL 639
+V E++ TL +++ + + + + L + H+ IIH D+KP NI++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 149
Query: 640 DNYFSAKISDFGLSKLLL-SDQSRTHT-MIRGTRGYVAPEWFKNAPVSAKVDVYSFGVML 697
+ K+ DFG+++ + S S T T + GT Y++PE + V A+ DVYS G +L
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 698 LEIIC 702
E++
Sbjct: 210 YEVLT 214
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + L G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L+ + M G L + + K + + ++ ++IA+G
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 136
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H G V
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVP 189
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELM 220
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Query: 580 LVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILL 639
+V E++ TL +++ + + + + L + H+ IIH D+KP NI++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 149
Query: 640 DNYFSAKISDFGLSKLLL-SDQSRTHT-MIRGTRGYVAPEWFKNAPVSAKVDVYSFGVML 697
+ K+ DFG+++ + S S T T + GT Y++PE + V A+ DVYS G +L
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 698 LEIIC 702
E++
Sbjct: 210 YEVLT 214
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 17/197 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR--LAQEREREFKSEVSAIGRTHHKNLVQLLG 570
+G+G+F V K +G+ +A+K +D+ L ++ EV + +H N+V+L
Sbjct: 20 IGKGNFAKV-KLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 78
Query: 571 FCDEALNRLLVYEFMGNGTLANLIFA---IPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
+ L+ E+ G + + + A + + + + R +I + Y H++ I
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCHQK---RI 132
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLS-KLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSA 686
+H D+K +N+LLD + KI+DFG S + + + T G+ Y APE F+
Sbjct: 133 VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC---GSPPYAAPELFQGKKYDG 189
Query: 687 -KVDVYSFGVMLLEIIC 702
+VDV+S GV+L ++
Sbjct: 190 PEVDVWSLGVILYTLVS 206
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L+ + M G L + + K + + ++ ++IA+G
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 131
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFG +KLL +++ H G V
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH----AEGGKVP 184
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELM 215
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+ +L + + + +E E +
Sbjct: 46 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVM 105
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L+ + M G L + + K + + ++ ++IA+G
Sbjct: 106 ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 163
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFGL+KLL +++ H G V
Sbjct: 164 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVP 216
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 217 IKWMALESILHRIYTHQSDVWSYGVTVWELM 247
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 20/211 (9%)
Query: 502 LKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQEREREFKSEVSAI 557
LKE + LG G+FG VYKG+ K +A+K+L + + + +E E +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 558 GRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS--LEIARG 615
+ ++ +LLG C + +L+ + M G L + + K + + ++ ++IA+G
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKG 129
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVA 675
+ YL + ++H D+ +N+L+ KI+DFG +KLL +++ H G V
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH----AEGGKVP 182
Query: 676 PEWFKNAPVSAKV-----DVYSFGVMLLEII 701
+W + ++ DV+S+GV + E++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELM 213
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Query: 580 LVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILL 639
+V E++ TL +++ + + + + L + H+ IIH D+KP NI++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 149
Query: 640 DNYFSAKISDFGLSKLLL-SDQSRTHT-MIRGTRGYVAPEWFKNAPVSAKVDVYSFGVML 697
+ K+ DFG+++ + S S T T + GT Y++PE + V A+ DVYS G +L
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 698 LEIIC 702
E++
Sbjct: 210 YEVLT 214
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 106/219 (48%), Gaps = 25/219 (11%)
Query: 494 LRFFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKA---IAVKKL-DRLAQERERE 549
LR E K+ + LG G+FG VYKG+ K +A+K+L + + + +E
Sbjct: 16 LRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 70
Query: 550 FKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRIS 609
E + + ++ +LLG C + +L+ + M G L + + K + + ++
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVRE-HKDNIGSQYLLN 128
Query: 610 --LEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMI 667
++IA+G+ YL + ++H D+ +N+L+ KI+DFG +KLL +++ H
Sbjct: 129 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH--- 182
Query: 668 RGTRGYVAPEWFKNAPVSAKV-----DVYSFGVMLLEII 701
G V +W + ++ DV+S+GV + E++
Sbjct: 183 -AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 14/194 (7%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
+GRGSFG V++ + +G AVKK+ RL R E V+ G + + +V L G
Sbjct: 82 VGRGSFGEVHR-MKDKQTGFQCAVKKV-RLEVFRVEEL---VACAGLSSPR-IVPLYGAV 135
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDI 632
E + E + G+L LI + + + + GL YLH I+H D+
Sbjct: 136 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDV 192
Query: 633 KPQNILLDNYFS-AKISDFGLSKLL----LSDQSRTHTMIRGTRGYVAPEWFKNAPVSAK 687
K N+LL + S A + DFG + L L T I GT ++APE P AK
Sbjct: 193 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 252
Query: 688 VDVYSFGVMLLEII 701
VD++S M+L ++
Sbjct: 253 VDIWSSCCMMLHML 266
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 115/269 (42%), Gaps = 34/269 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKL---DRLAQEREREFKSEVSAIGRT-HHKNLVQL 568
LG+G F ++ + A K + K+ L + +RE S +I R+ H+++V
Sbjct: 23 LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 80
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIF---AIPKPDWNLRVRISLEIARGLVYLHEECNV 625
GF ++ +V E +L L A+ +P+ +R +I G YLH
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR---QIVLGCQYLHRN--- 134
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+IH D+K N+ L+ KI DFGL+ + D R + GT Y+APE S
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC-GTPNYIAPEVLSKKGHS 193
Query: 686 AKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAMAD 745
+VDV+S G ++ ++ + E +E + Y + P A
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS---------IPKHINPVAA- 243
Query: 746 RSRLQKWLMIAMWCIREDPSKRPTMKVVL 774
S +QK L + DP+ RPT+ +L
Sbjct: 244 -SLIQKML-------QTDPTARPTINELL 264
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 102/204 (50%), Gaps = 30/204 (14%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK-SEVSAIGRTHHKNLVQLLGF 571
LG+G+ V++G K +G A+K + ++ R + + E + + +HKN+V+L
Sbjct: 17 LGQGATANVFRGRHKK-TGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 572 CDEALNR--LLVYEFMGNGTLANLI------FAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+E R +L+ EF G+L ++ + +P+ ++ + +R ++ G+ +L E
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLR---DVVGGMNHLRENG 132
Query: 624 NVPIIHCDIKPQNILL----DNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF 679
I+H +IKP NI+ D K++DFG ++ L D+ + GT Y+ P+ +
Sbjct: 133 ---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVSLYGTEEYLHPDMY 187
Query: 680 KNAPV--------SAKVDVYSFGV 695
+ A + A VD++S GV
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGV 211
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Query: 580 LVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILL 639
+V E++ TL +++ + + + + L + H+ IIH D+KP NI++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 149
Query: 640 DNYFSAKISDFGLSKLLL-SDQSRTHT-MIRGTRGYVAPEWFKNAPVSAKVDVYSFGVML 697
+ K+ DFG+++ + S S T T + GT Y++PE + V A+ DVYS G +L
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 698 LEIIC 702
E++
Sbjct: 210 YEVLT 214
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y VL + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 70 IGSGAQGIVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + LV E M ANL I + R+ L ++ G+ +LH
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKHLH 181
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S T TR Y APE
Sbjct: 182 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 236
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E++
Sbjct: 237 GMGYKENVDIWSVGCIMGEMV 257
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Query: 580 LVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILL 639
+V E++ TL +++ + + + + L + H+ IIH D+KP NI++
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 166
Query: 640 DNYFSAKISDFGLSKLLL-SDQSRTHT-MIRGTRGYVAPEWFKNAPVSAKVDVYSFGVML 697
+ K+ DFG+++ + S S T T + GT Y++PE + V A+ DVYS G +L
Sbjct: 167 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 226
Query: 698 LEIIC 702
E++
Sbjct: 227 YEVLT 231
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 118/285 (41%), Gaps = 53/285 (18%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRL--AQEREREFKS------------EVSAI 557
ELGRG++G+V K SG+ AVK++ +QE++R V+
Sbjct: 41 ELGRGAYGVVEK-XRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFY 99
Query: 558 GRTHHKNLVQLLG-FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGL 616
G + V + D +L++ T+ I +I++ I + L
Sbjct: 100 GALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILG----------KIAVSIVKAL 149
Query: 617 VYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAP 676
+LH + +V IH D+KP N+L++ K DFG+S L+ D ++ + G + Y AP
Sbjct: 150 EHLHSKLSV--IHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAK--DIDAGCKPYXAP 205
Query: 677 E----WFKNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAE--G 730
E S K D++S G+ +E+ R + YD +
Sbjct: 206 ERINPELNQKGYSVKSDIWSLGITXIELAILR-----------------FPYDSWGTPFQ 248
Query: 731 RLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
+L +V+ P + +++ C++++ +RPT + Q
Sbjct: 249 QLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQ 293
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 25/202 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y +L+ + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 32 IGSGAQGIVCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + +V E M ANL I + R+ L ++ G+ +LH
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + ++ TR Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV--TRYYRAPEVIL 198
Query: 681 NAPVSAKVDVYSFGVMLLEIIC 702
VD++S G ++ E++C
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVC 220
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y VL + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 26 IGSGAQGIVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 81
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + LV E M ANL I + R+ L ++ G+ +LH
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S T TR Y APE
Sbjct: 138 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 192
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E++
Sbjct: 193 GMGYKENVDIWSVGCIMGEMV 213
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 96/220 (43%), Gaps = 39/220 (17%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG+G+FG V K + + A+KK+ R +E+ SEV + +H+ +V+
Sbjct: 14 LGQGAFGQVVKA-RNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVVRYYAAW 71
Query: 573 DEALN-------------RLLVYEFMGNGTLANLIFAIPKPDWNLRV----RISLEIARG 615
E N + E+ N TL +LI + + N + R+ +I
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHS---ENLNQQRDEYWRLFRQILEA 128
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK--------LLLSDQ-----SR 662
L Y+H + IIH ++KP NI +D + KI DFGL+K L L Q S
Sbjct: 129 LSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 663 THTMIRGTRGYVAPEWFK-NAPVSAKVDVYSFGVMLLEII 701
T GT YVA E + K+D YS G++ E I
Sbjct: 186 NLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y VL + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 32 IGSGAQGIVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + LV E M ANL I + R+ L ++ G+ +LH
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S T TR Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y VL + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 26 IGSGAQGIVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 81
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + LV E M ANL I + R+ L ++ G+ +LH
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S T TR Y APE
Sbjct: 138 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 192
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E++
Sbjct: 193 GMGYKENVDIWSVGCIMGEMV 213
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 105/234 (44%), Gaps = 29/234 (12%)
Query: 485 QDSSTSETNLRFFSYNELKEATGGFKEE---------LGRGSFGIVYKGVLKSASGKAIA 535
+ S +E N +LK ++EE LGRGSFG V++ + +G A
Sbjct: 64 EPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLRLGRGSFGEVHR-MEDKQTGFQCA 122
Query: 536 VKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI- 594
VKK+ RL R E ++ G T + +V L G E + E + G+L L+
Sbjct: 123 VKKV-RLEVFRAEEL---MACAGLTSPR-IVPLYGAVREGPWVNIFMELLEGGSLGQLVK 177
Query: 595 --FAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFS-AKISDFG 651
+P+ + +LE GL YLH I+H D+K N+LL + S A + DFG
Sbjct: 178 EQGCLPEDRALYYLGQALE---GLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFG 231
Query: 652 LSKLL----LSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEII 701
+ L L T I GT ++APE AKVDV+S M+L ++
Sbjct: 232 HAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHML 285
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y VL + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 33 IGSGAQGIVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 88
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + LV E M ANL I + R+ L ++ G+ +LH
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S T TR Y APE
Sbjct: 145 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E++
Sbjct: 200 GMGYKENVDIWSVGCIMGEMV 220
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y VL + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 33 IGSGAQGIVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 88
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + LV E M ANL I + R+ L ++ G+ +LH
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S T TR Y APE
Sbjct: 145 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E++
Sbjct: 200 GMGYKENVDIWSVGCIMGEMV 220
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y VL + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 31 IGSGAQGIVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 86
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + LV E M ANL I + R+ L ++ G+ +LH
Sbjct: 87 LLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKHLH 142
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S T TR Y APE
Sbjct: 143 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 197
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E++
Sbjct: 198 GMGYKENVDIWSVGCIMGEMV 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y VL + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 32 IGSGAQGIVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + LV E M ANL I + R+ L ++ G+ +LH
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S T TR Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 16/199 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR--------LAQEREREFKSEVSAIGRTHHKN 564
LG G+FG V+ V K + K + VK + + + + + E++ + R H N
Sbjct: 32 LGSGAFGFVWTAVDKEKN-KEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHAN 90
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGT-LANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
++++L + LV E G+G L I P+ D L I ++ + YL +
Sbjct: 91 IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK- 149
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
IIH DIK +NI++ F+ K+ DFG + L ++ + GT Y APE P
Sbjct: 150 --DIIHRDIKDENIVIAEDFTIKLIDFGSAAYL--ERGKLFYTFCGTIEYCAPEVLMGNP 205
Query: 684 VSA-KVDVYSFGVMLLEII 701
+++++S GV L ++
Sbjct: 206 YRGPELEMWSLGVTLYTLV 224
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER--EREFKSEVSAIGRTHHKNLVQLLG 570
+G G++G+V + + +A+KK+ + +R + E+ + R H+N++ +
Sbjct: 51 IGEGAYGMVCSAY-DNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIND 108
Query: 571 FC-----DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNV 625
++ + LV MG L L+ + ++ +I RGL Y+H +
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMG-ADLYKLLKTQHLSNDHI-CYFLYQILRGLKYIH---SA 163
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR--GTRGYVAPEWFKNAP 683
++H D+KP N+LL+ KI DFGL+++ D T + TR Y APE N+
Sbjct: 164 NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 684 VSAK-VDVYSFGVMLLEIICCR 704
K +D++S G +L E++ R
Sbjct: 224 GYTKSIDIWSVGCILAEMLSNR 245
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y VL + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 25 IGSGAQGIVCAAYDAVL----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + LV E M ANL I + R+ L ++ G+ +LH
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKHLH 136
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S T TR Y APE
Sbjct: 137 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 191
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E++
Sbjct: 192 GMGYKENVDIWSVGCIMGEMV 212
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 14/198 (7%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERERE---FKSEVSAIGRTHHKNLVQLL 569
+GRG+FG V + V ++ K A+K L + + + F E + + +VQL
Sbjct: 77 IGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
+ +V E+M G L NL+ P+ R + E+ L +H ++ IH
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF-YTAEVVLALDAIH---SMGFIH 191
Query: 630 CDIKPQNILLDNYFSAKISDFGL-SKLLLSDQSRTHTMIRGTRGYVAPEWFK----NAPV 684
D+KP N+LLD K++DFG K+ R T + GT Y++PE K +
Sbjct: 192 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYY 250
Query: 685 SAKVDVYSFGVMLLEIIC 702
+ D +S GV L E++
Sbjct: 251 GRECDWWSVGVFLYEMLV 268
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQE--REREFKSEVSAIGRTHHKNLVQ 567
+G G++G V Y L+ + +AVKKL R Q R E+ + H+N++
Sbjct: 36 VGSGAYGSVCSAYDARLR----QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 568 LLGFCDEALN------RLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHE 621
LL A + LV MG L N++ + D +++ + ++ RGL Y+H
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKSQALSDEHVQFLV-YQLLRGLKYIH- 148
Query: 622 ECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
+ IIH D+KP N+ ++ +I DFGL++ +D+ T + TR Y APE N
Sbjct: 149 --SAGIIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYV--ATRWYRAPEIMLN 202
Query: 682 -APVSAKVDVYSFGVMLLEII 701
+ VD++S G ++ E++
Sbjct: 203 WMHYNQTVDIWSVGCIMAELL 223
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER--EREFKSEVSAIGRTHHKNLVQL-- 568
+G G++G+V + + +A+KK+ + +R + E+ + R H+N++ +
Sbjct: 31 IGEGAYGMVCSAY-DNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIND 88
Query: 569 ----------------LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEI 612
+ L +LL + + N + ++ +I
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY---------------QI 133
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR--GT 670
RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T + T
Sbjct: 134 LRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVAT 190
Query: 671 RGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
R Y APE N+ K +D++S G +L E++ R
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 15/204 (7%)
Query: 513 LGRGSFGIVYKGVLKSASG-KAIAVKKLDRLAQEREREF-KSEVSAIGRTHHKNLVQLLG 570
+GRGS+ V LK A+ V K + + + + ++ ++E + + + L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 571 FCDEALNRLL-VYEFMGNGTLANLIFAIPK----PDWNLRVRISLEIARGLVYLHEECNV 625
C + +RL V E++ G +L+F + + P+ + R S EI+ L YLHE
Sbjct: 77 SCFQTESRLFFVIEYVNGG---DLMFHMQRQRKLPEEHARF-YSAEISLALNYLHERG-- 130
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
II+ D+K N+LLD+ K++D+G+ K L T + GT Y+APE +
Sbjct: 131 -IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTSXFCGTPNYIAPEILRGEDYG 188
Query: 686 AKVDVYSFGVMLLEIICCRRSVEM 709
VD ++ GV++ E++ R ++
Sbjct: 189 FSVDWWALGVLMFEMMAGRSPFDI 212
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 14/198 (7%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERERE---FKSEVSAIGRTHHKNLVQLL 569
+GRG+FG V + V ++ K A+K L + + + F E + + +VQL
Sbjct: 82 IGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
+ +V E+M G L NL+ P+ R + E+ L +H ++ IH
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA-EVVLALDAIH---SMGFIH 196
Query: 630 CDIKPQNILLDNYFSAKISDFGL-SKLLLSDQSRTHTMIRGTRGYVAPEWFK----NAPV 684
D+KP N+LLD K++DFG K+ R T + GT Y++PE K +
Sbjct: 197 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYY 255
Query: 685 SAKVDVYSFGVMLLEIIC 702
+ D +S GV L E++
Sbjct: 256 GRECDWWSVGVFLYEMLV 273
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 21/204 (10%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQ 567
+ +G G++G V V +G +A+KKL R Q +R ++ E+ + H+N++
Sbjct: 31 QPVGSGAYGAVCSAV-DGRTGAKVAIKKLYRPFQSELFAKRAYR-ELRLLKHMRHENVIG 88
Query: 568 LLGFC--DEALNRL----LVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHE 621
LL DE L+ LV FMG L L+ + ++ + ++ +GL Y+H
Sbjct: 89 LLDVFTPDETLDDFTDFYLVMPFMGTD-LGKLMKHEKLGEDRIQFLV-YQMLKGLRYIH- 145
Query: 622 ECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
IIH D+KP N+ ++ KI DFGL++ +D ++ TR Y APE N
Sbjct: 146 --AAGIIHRDLKPGNLAVNEDCELKILDFGLAR--QADSEMXGXVV--TRWYRAPEVILN 199
Query: 682 -APVSAKVDVYSFGVMLLEIICCR 704
+ VD++S G ++ E+I +
Sbjct: 200 WMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 101/206 (49%), Gaps = 25/206 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQER--EREFKSEVSAIGRTHHKNLVQ 567
+G G++G+V Y V K+ +A+KK+ + +R + E+ + R H+N++
Sbjct: 51 IGEGAYGMVSSAYDHVRKTR----VAIKKISPFEHQTYCQRTLR-EIQILLRFRHENVIG 105
Query: 568 LLGFCD----EALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC 623
+ EA+ + + + + L L+ + + ++ +I RGL Y+H
Sbjct: 106 IRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHI-CYFLYQILRGLKYIH--- 161
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR----GTRGYVAPEWF 679
+ ++H D+KP N+L++ KI DFGL++ ++D HT TR Y APE
Sbjct: 162 SANVLHRDLKPSNLLINTTCDLKICDFGLAR--IADPEHDHTGFLTEXVATRWYRAPEIM 219
Query: 680 KNAPVSAK-VDVYSFGVMLLEIICCR 704
N+ K +D++S G +L E++ R
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 14/198 (7%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERERE---FKSEVSAIGRTHHKNLVQLL 569
+GRG+FG V + V ++ K A+K L + + + F E + + +VQL
Sbjct: 82 IGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
+ +V E+M G L NL+ P+ R + E+ L +H ++ IH
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA-EVVLALDAIH---SMGFIH 196
Query: 630 CDIKPQNILLDNYFSAKISDFGL-SKLLLSDQSRTHTMIRGTRGYVAPEWFK----NAPV 684
D+KP N+LLD K++DFG K+ R T + GT Y++PE K +
Sbjct: 197 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYY 255
Query: 685 SAKVDVYSFGVMLLEIIC 702
+ D +S GV L E++
Sbjct: 256 GRECDWWSVGVFLYEMLV 273
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y +L+ + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 32 IGSGAQGIVCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + +V E M ANL I + R+ L ++ G+ +LH
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD----ANLSQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + T ++ TR Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV--TRYYRAPEVIL 198
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E+I
Sbjct: 199 GMGYKENVDIWSVGCIMGEMI 219
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 105/234 (44%), Gaps = 29/234 (12%)
Query: 485 QDSSTSETNLRFFSYNELKEATGGFKEE---------LGRGSFGIVYKGVLKSASGKAIA 535
+ S +E N +LK ++EE LGRGSFG V++ + +G A
Sbjct: 45 EPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLRLGRGSFGEVHR-MEDKQTGFQCA 103
Query: 536 VKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLI- 594
VKK+ RL R E ++ G T + +V L G E + E + G+L L+
Sbjct: 104 VKKV-RLEVFRAEEL---MACAGLTSPR-IVPLYGAVREGPWVNIFMELLEGGSLGQLVK 158
Query: 595 --FAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFS-AKISDFG 651
+P+ + +LE GL YLH I+H D+K N+LL + S A + DFG
Sbjct: 159 EQGCLPEDRALYYLGQALE---GLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFG 212
Query: 652 LSKLL----LSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEII 701
+ L L T I GT ++APE AKVDV+S M+L ++
Sbjct: 213 HAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHML 266
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 15/204 (7%)
Query: 513 LGRGSFGIVYKGVLKSASG-KAIAVKKLDRLAQEREREF-KSEVSAIGRTHHKNLVQLLG 570
+GRGS+ V LK A+ V K + + + + ++ ++E + + + L
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 571 FCDEALNRLL-VYEFMGNGTLANLIFAIPK----PDWNLRVRISLEIARGLVYLHEECNV 625
C + +RL V E++ G +L+F + + P+ + R S EI+ L YLHE
Sbjct: 73 SCFQTESRLFFVIEYVNGG---DLMFHMQRQRKLPEEHARF-YSAEISLALNYLHERG-- 126
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
II+ D+K N+LLD+ K++D+G+ K L T + GT Y+APE +
Sbjct: 127 -IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTSXFCGTPNYIAPEILRGEDYG 184
Query: 686 AKVDVYSFGVMLLEIICCRRSVEM 709
VD ++ GV++ E++ R ++
Sbjct: 185 FSVDWWALGVLMFEMMAGRSPFDI 208
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 25/202 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y +L+ + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 32 IGSGAQGIVCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + +V E M ANL I + R+ L ++ G+ +LH
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + ++ TR Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV--TRYYRAPEVIL 198
Query: 681 NAPVSAKVDVYSFGVMLLEIIC 702
VD++S G ++ E++C
Sbjct: 199 GMGYKENVDLWSVGCIMGEMVC 220
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 24/203 (11%)
Query: 510 KEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGR-THHKNLVQL 568
KE +G GS+ + V K A+ AVK +D+ +R+ E+ + R H N++ L
Sbjct: 32 KETIGVGSYSECKRCVHK-ATNMEYAVKVIDK----SKRDPSEEIEILLRYGQHPNIITL 86
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLI-----FAIPKPDWNLRVRISLEIARGLVYLHEEC 623
D+ + LV E M G L + I F+ + + L I + + YLH +
Sbjct: 87 KDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-----IGKTVEYLHSQG 141
Query: 624 NVPIIHCDIKPQNILL----DNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF 679
++H D+KP NIL N +I DFG +K L ++ T T +VAPE
Sbjct: 142 ---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVL 197
Query: 680 KNAPVSAKVDVYSFGVMLLEIIC 702
K D++S G++L ++
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLA 220
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER--EREFKSEVSAIGRTHHKNLVQL-- 568
+G G++G+V + + +A+KK+ + +R + E+ + R H+N++ +
Sbjct: 31 IGEGAYGMVCSAY-DNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIND 88
Query: 569 ----------------LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEI 612
+ L +LL + + N + ++ +I
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY---------------QI 133
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR--GT 670
RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T + T
Sbjct: 134 LRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 671 RGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
R Y APE N+ K +D++S G +L E++ R
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 513 LGRGSFGIVYKGVLKSASG-KAIAVKKLDRLAQEREREF-KSEVSAIGRTHHKNLVQLLG 570
+GRGS+ V LK A+ V K + + + + ++ ++E + + + L
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 571 FCDEALNRLL-VYEFMGNGTLANLIFAIPK----PDWNLRVRISLEIARGLVYLHEECNV 625
C + +RL V E++ G +L+F + + P+ + R S EI+ L YLHE
Sbjct: 88 SCFQTESRLFFVIEYVNGG---DLMFHMQRQRKLPEEHARF-YSAEISLALNYLHERG-- 141
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
II+ D+K N+LLD+ K++D+G+ K L T + GT Y+APE +
Sbjct: 142 -IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTSXFCGTPNYIAPEILRGEDYG 199
Query: 686 AKVDVYSFGVMLLEIICCR 704
VD ++ GV++ E++ R
Sbjct: 200 FSVDWWALGVLMFEMMAGR 218
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER--EREFKSEVSAIGRTHHKNLVQL-- 568
+G G++G+V + + +A+KK+ + +R + E+ + R H+N++ +
Sbjct: 31 IGEGAYGMVCSAY-DNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIND 88
Query: 569 ----------------LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEI 612
+ L +LL + + N + ++ +I
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY---------------QI 133
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR--GT 670
RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T + T
Sbjct: 134 LRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 671 RGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
R Y APE N+ K +D++S G +L E++ R
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 580 LVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILL 639
+V E++ TL +++ + + + + L + H+ IIH D+KP NIL+
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANILI 149
Query: 640 DNYFSAKISDFGLSKLLL-SDQSRTHT-MIRGTRGYVAPEWFKNAPVSAKVDVYSFGVML 697
+ K+ DFG+++ + S S T + GT Y++PE + V A+ DVYS G +L
Sbjct: 150 SATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 698 LEIIC 702
E++
Sbjct: 210 YEVLT 214
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y +L+ + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 32 IGSGAQGIVCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + +V E M ANL I + R+ L ++ G+ +LH
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + T ++ TR Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVV--TRYYRAPEVIL 198
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E+I
Sbjct: 199 GMGYKENVDIWSVGCIMGEMI 219
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 24/203 (11%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQL 568
+LG G++G VYK + + + + +A+K++ RL E E + EVS + H+N+++L
Sbjct: 41 KLGEGTYGEVYKAI-DTVTNETVAIKRI-RLEHEEEGVPGTAIREVSLLKELQHRNIIEL 98
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVYLH-EECNV 625
L++E+ N + PD ++RV S ++ G+ + H C
Sbjct: 99 KSVIHHNHRLHLIFEYAENDLKK---YMDKNPDVSMRVIKSFLYQLINGVNFCHSRRC-- 153
Query: 626 PIIHCDIKPQNILLDNYFSA-----KISDFGLSKLL-LSDQSRTHTMIRGTRGYVAPEWF 679
+H D+KPQN+LL ++ KI DFGL++ + + TH +I T Y PE
Sbjct: 154 --LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII--TLWYRPPEIL 209
Query: 680 KNA-PVSAKVDVYSFGVMLLEII 701
+ S VD++S + E++
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEML 232
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y +L+ + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 32 IGSGAQGIVCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + +V E M ANL I + R+ L ++ G+ +LH
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S T TR Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E+I
Sbjct: 199 GMGYKENVDIWSVGCIMGEMI 219
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y +L+ + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 33 IGSGAQGIVCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 88
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + +V E M ANL I + R+ L ++ G+ +LH
Sbjct: 89 LLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + T ++ TR Y APE
Sbjct: 145 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYRAPEVIL 199
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E+I
Sbjct: 200 GMGYKENVDIWSVGCIMGEMI 220
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER--EREFKSEVSAIGRTHHKNLVQL-- 568
+G G++G+V + + +A+KK+ + +R + E+ + R H+N++ +
Sbjct: 39 IGEGAYGMVCSAY-DNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIND 96
Query: 569 ----------------LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEI 612
+ L +LL + + N + ++ +I
Sbjct: 97 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY---------------QI 141
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR--GT 670
RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T + T
Sbjct: 142 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 198
Query: 671 RGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
R Y APE N+ K +D++S G +L E++ R
Sbjct: 199 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER--EREFKSEVSAIGRTHHKNLVQL-- 568
+G G++G+V + + +A+KK+ + +R + E+ + R H+N++ +
Sbjct: 31 IGEGAYGMVCSAY-DNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIND 88
Query: 569 ----------------LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEI 612
+ L +LL + + N + ++ +I
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY---------------QI 133
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR--GT 670
RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T + T
Sbjct: 134 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 671 RGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
R Y APE N+ K +D++S G +L E++ R
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER--EREFKSEVSAIGRTHHKNLVQL-- 568
+G G++G+V + + +A+KK+ + +R + E+ + R H+N++ +
Sbjct: 31 IGEGAYGMVCSAY-DNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIND 88
Query: 569 ----------------LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEI 612
+ L +LL + + N + ++ +I
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY---------------QI 133
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR--GT 670
RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T + T
Sbjct: 134 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 671 RGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
R Y APE N+ K +D++S G +L E++ R
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 125/291 (42%), Gaps = 47/291 (16%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKL---DRLAQEREREFKSEVSAIGRTHHKNLVQ 567
E +G+G +G V++G S G+ +AVK D + RE E + V H+N+
Sbjct: 43 ECVGKGRYGEVWRG---SWQGENVAVKIFSSRDEKSWFRETELYNTV----MLRHENI-- 93
Query: 568 LLGFCDEALNR-------LLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLH 620
LGF + L+ + G+L + + + D +RI L IA GL +LH
Sbjct: 94 -LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSIASGLAHLH 151
Query: 621 EEC-----NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMI-----RGT 670
E I H D+K +NIL+ I+D GL+ ++ QS + GT
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA--VMHSQSTNQLDVGNNPRVGT 209
Query: 671 RGYVAPEWFKNA------PVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY 724
+ Y+APE +VD+++FG++L E+ RR V + E+ + D
Sbjct: 210 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVEDYKPPFYDVVP 267
Query: 725 D--CYAEGRLDVLVDSDEPAMADR----SRLQKWLMIAMWCIREDPSKRPT 769
+ + + R V VD P + +R L + C ++PS R T
Sbjct: 268 NDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 318
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQE--REREFKSEVSAIGRTHHKNLVQ 567
+G G++G V Y L+ + +AVKKL R Q R E+ + H+N++
Sbjct: 28 VGSGAYGSVCSAYDARLR----QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 83
Query: 568 LLGFCDEALN------RLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHE 621
LL A + LV MG L N++ D +++ + ++ RGL Y+H
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKCQALSDEHVQFLV-YQLLRGLKYIH- 140
Query: 622 ECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
+ IIH D+KP N+ ++ +I DFGL++ +D+ T + TR Y APE N
Sbjct: 141 --SAGIIHRDLKPSNVAVNEDCELRILDFGLAR--QADEEMTGYV--ATRWYRAPEIMLN 194
Query: 682 -APVSAKVDVYSFGVMLLEII 701
+ VD++S G ++ E++
Sbjct: 195 WMHYNQTVDIWSVGCIMAELL 215
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER--EREFKSEVSAIGRTHHKNLVQL-- 568
+G G++G+V + + +A+KK+ + +R + E+ + R H+N++ +
Sbjct: 35 IGEGAYGMVCSAY-DNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIND 92
Query: 569 ----------------LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEI 612
+ L +LL + + N + ++ +I
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY---------------QI 137
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR--GT 670
RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T + T
Sbjct: 138 LRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 671 RGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
R Y APE N+ K +D++S G +L E++ R
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQE--REREFKSEVSAIGRTHHKNLVQ 567
+G G++G V Y L+ + +AVKKL R Q R E+ + H+N++
Sbjct: 36 VGSGAYGSVCSAYDARLR----QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 568 LLGFCDEALN------RLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHE 621
LL A + LV MG L N++ D +++ + ++ RGL Y+H
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKCQALSDEHVQFLV-YQLLRGLKYIH- 148
Query: 622 ECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
+ IIH D+KP N+ ++ +I DFGL++ +D+ T + TR Y APE N
Sbjct: 149 --SAGIIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYV--ATRWYRAPEIMLN 202
Query: 682 -APVSAKVDVYSFGVMLLEII 701
+ VD++S G ++ E++
Sbjct: 203 WMHYNQTVDIWSVGCIMAELL 223
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y +L+ + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 32 IGSGAQGIVCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + +V E M ANL I + R+ L ++ G+ +LH
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD----ANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S T TR Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E+I
Sbjct: 199 GMGYKENVDIWSVGCIMGEMI 219
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER--EREFKSEVSAIGRTHHKNLVQL-- 568
+G G++G+V + + +A+KK+ + +R + E+ + R H+N++ +
Sbjct: 33 IGEGAYGMVCSAY-DNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIND 90
Query: 569 ----------------LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEI 612
+ L +LL + + N + ++ +I
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY---------------QI 135
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR--GT 670
RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T + T
Sbjct: 136 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 671 RGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
R Y APE N+ K +D++S G +L E++ R
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y +L+ + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 32 IGSGAQGIVCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + +V E M ANL I + R+ L ++ G+ +LH
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S T TR Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E+I
Sbjct: 199 GMGYKENVDIWSVGCIMGEMI 219
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQE--REREFKSEVSAIGRTHHKNLVQL-- 568
+G G++G+V + + +A+KK+ + +R + E+ + R H+N++ +
Sbjct: 35 IGEGAYGMVCSAY-DNLNKVRVAIKKISPFEHQTYXQRTLR-EIKILLRFRHENIIGIND 92
Query: 569 ----------------LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEI 612
+ L +LL + + N + ++ +I
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY---------------QI 137
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR--GT 670
RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T + T
Sbjct: 138 LRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 671 RGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
R Y APE N+ K +D++S G +L E++ R
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR--LAQEREREFKSEVSAIGRTHHKNLVQLLG 570
+G+G+F V K +G+ +A+K +D+ L ++ EV + +H N+V+L
Sbjct: 23 IGKGNFAKV-KLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 571 FCDEALNRLLVYEFMGNGTLANLIFA---IPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
+ L+ E+ G + + + A + + + + R +I + Y H++ I
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCHQK---RI 135
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSA- 686
+H D+K +N+LLD + KI+DFG S G Y APE F+
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL--DAFCGAPPYAAPELFQGKKYDGP 193
Query: 687 KVDVYSFGVMLLEII 701
+VDV+S GV+L ++
Sbjct: 194 EVDVWSLGVILYTLV 208
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER--EREFKSEVSAIGRTHHKNLVQL-- 568
+G G++G+V + + +A+KK+ + +R + E+ + R H+N++ +
Sbjct: 51 IGEGAYGMVCSAY-DNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIND 108
Query: 569 ----------------LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEI 612
+ L +LL + + N + ++ +I
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY---------------QI 153
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR--GT 670
RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T + T
Sbjct: 154 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 671 RGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
R Y APE N+ K +D++S G +L E++ R
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 24/203 (11%)
Query: 510 KEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGR-THHKNLVQL 568
KE +G GS+ + V K A+ AVK +D+ +R+ E+ + R H N++ L
Sbjct: 32 KETIGVGSYSECKRCVHK-ATNMEYAVKVIDK----SKRDPSEEIEILLRYGQHPNIITL 86
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLI-----FAIPKPDWNLRVRISLEIARGLVYLHEEC 623
D+ + LV E M G L + I F+ + + L I + + YLH +
Sbjct: 87 KDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-----IGKTVEYLHSQG 141
Query: 624 NVPIIHCDIKPQNILL----DNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF 679
++H D+KP NIL N +I DFG +K L ++ T T +VAPE
Sbjct: 142 ---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVL 197
Query: 680 KNAPVSAKVDVYSFGVMLLEIIC 702
K D++S G++L ++
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLA 220
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQE--REREFKSEVSAIGRTHHKNLV 566
K LG G++G+V K +G+ +A+KK++ + R + E+ + H+N++
Sbjct: 15 LKSLLGEGAYGVVCSATHK-PTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENII 72
Query: 567 QLLGF----CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEE 622
+ E N + + + + L +I D +++ I + R + LH
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRAVKVLHGS 131
Query: 623 CNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL---LSDQSRTHTMIRGTRGYVAPEWF 679
+IH D+KP N+L+++ K+ DFGL++++ +D S G YVA W+
Sbjct: 132 N---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWY 188
Query: 680 K-------NAPVSAKVDVYSFGVMLLEIICCR 704
+ +A S +DV+S G +L E+ R
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 125/291 (42%), Gaps = 47/291 (16%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKL---DRLAQEREREFKSEVSAIGRTHHKNLVQ 567
E +G+G +G V++G S G+ +AVK D + RE E + V H+N+
Sbjct: 14 ECVGKGRYGEVWRG---SWQGENVAVKIFSSRDEKSWFRETELYNTVML----RHENI-- 64
Query: 568 LLGFCDEALNR-------LLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLH 620
LGF + L+ + G+L + + + D +RI L IA GL +LH
Sbjct: 65 -LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSIASGLAHLH 122
Query: 621 EEC-----NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMI-----RGT 670
E I H D+K +NIL+ I+D GL+ ++ QS + GT
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA--VMHSQSTNQLDVGNNPRVGT 180
Query: 671 RGYVAPEWFKNA------PVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY 724
+ Y+APE +VD+++FG++L E+ RR V + E+ + D
Sbjct: 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVEDYKPPFYDVVP 238
Query: 725 D--CYAEGRLDVLVDSDEPAMADR----SRLQKWLMIAMWCIREDPSKRPT 769
+ + + R V VD P + +R L + C ++PS R T
Sbjct: 239 NDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 289
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 125/291 (42%), Gaps = 47/291 (16%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKL---DRLAQEREREFKSEVSAIGRTHHKNLVQ 567
E +G+G +G V++G S G+ +AVK D + RE E + V H+N+
Sbjct: 14 ECVGKGRYGEVWRG---SWQGENVAVKIFSSRDEKSWFRETELYNTVML----RHENI-- 64
Query: 568 LLGFCDEALNR-------LLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLH 620
LGF + L+ + G+L + + + D +RI L IA GL +LH
Sbjct: 65 -LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSIASGLAHLH 122
Query: 621 EEC-----NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMI-----RGT 670
E I H D+K +NIL+ I+D GL+ ++ QS + GT
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA--VMHSQSTNQLDVGNNPRVGT 180
Query: 671 RGYVAPEWFKNA------PVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAY 724
+ Y+APE +VD+++FG++L E+ RR V + E+ + D
Sbjct: 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVEDYKPPFYDVVP 238
Query: 725 D--CYAEGRLDVLVDSDEPAMADR----SRLQKWLMIAMWCIREDPSKRPT 769
+ + + R V VD P + +R L + C ++PS R T
Sbjct: 239 NDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 289
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER--EREFKSEVSAIGRTHHKNLVQL-- 568
+G G++G+V + + +A+KK+ + +R + E+ + R H+N++ +
Sbjct: 36 IGEGAYGMVCSAY-DNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIND 93
Query: 569 ----------------LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEI 612
+ L +LL + + N + ++ +I
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY---------------QI 138
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR--GT 670
RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T + T
Sbjct: 139 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 195
Query: 671 RGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
R Y APE N+ K +D++S G +L E++ R
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER--EREFKSEVSAIGRTHHKNLVQL-- 568
+G G++G+V + + +A+KK+ + +R + E+ + R H+N++ +
Sbjct: 37 IGEGAYGMVCSAY-DNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIND 94
Query: 569 ----------------LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEI 612
+ L +LL + + N + ++ +I
Sbjct: 95 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY---------------QI 139
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR--GT 670
RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T + T
Sbjct: 140 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 196
Query: 671 RGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
R Y APE N+ K +D++S G +L E++ R
Sbjct: 197 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER--EREFKSEVSAIGRTHHKNLVQL-- 568
+G G++G+V + + +A+KK+ + +R + E+ + R H+N++ +
Sbjct: 28 IGEGAYGMVCSAY-DNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIND 85
Query: 569 ----------------LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEI 612
+ L +LL + + N + ++ +I
Sbjct: 86 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY---------------QI 130
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR--GT 670
RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T + T
Sbjct: 131 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 187
Query: 671 RGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
R Y APE N+ K +D++S G +L E++ R
Sbjct: 188 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER--EREFKSEVSAIGRTHHKNLVQL-- 568
+G G++G+V + + +A+KK+ + +R + E+ + R H+N++ +
Sbjct: 35 IGEGAYGMVCSAY-DNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIND 92
Query: 569 ----------------LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEI 612
+ L +LL + + N + ++ +I
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY---------------QI 137
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR--GT 670
RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T + T
Sbjct: 138 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 671 RGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
R Y APE N+ K +D++S G +L E++ R
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y +L+ + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 32 IGSGAQGIVCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + +V E M ANL I + R+ L ++ G+ +LH
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD----ANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + T ++ TR Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV--TRYYRAPEVIL 198
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E+I
Sbjct: 199 GMGYKENVDIWSVGCIMGEMI 219
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 16/209 (7%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
LG+G F Y+ + +GK + L L ++ + +E++ + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSML--LKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIF---AIPKPDWNLRVRISLEIARGLVYLHEECNV 625
GF ++ +V E +L L A+ +P+ +R +++ G+ YLH N
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ---GVQYLH---NN 161
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+IH D+K N+ L++ KI DFGL+ + D R T+ GT Y+APE S
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLC-GTPNYIAPEVLCKKGHS 220
Query: 686 AKVDVYSFGVMLLEIICCRRSVEMEVEEE 714
+VD++S G +L ++ + E +E
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFETSCLKE 249
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER--EREFKSEVSAIGRTHHKNLVQL-- 568
+G G++G+V + + +A+KK+ + +R + E+ + R H+N++ +
Sbjct: 29 IGEGAYGMVCSAY-DNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIND 86
Query: 569 ----------------LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEI 612
+ L +LL + + N + ++ +I
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY---------------QI 131
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR--GT 670
RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T + T
Sbjct: 132 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 671 RGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
R Y APE N+ K +D++S G +L E++ R
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER--EREFKSEVSAIGRTHHKNLVQL-- 568
+G G++G+V + + +A+KK+ + +R + E+ + R H+N++ +
Sbjct: 29 IGEGAYGMVCSAY-DNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIND 86
Query: 569 ----------------LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEI 612
+ L +LL + + N + ++ +I
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY---------------QI 131
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR--GT 670
RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T + T
Sbjct: 132 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 671 RGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
R Y APE N+ K +D++S G +L E++ R
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y +L+ + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 32 IGSGAQGIVCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + +V E M ANL I + R+ L ++ G+ +LH
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD----ANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + T ++ TR Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYRAPEVIL 198
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E+I
Sbjct: 199 GMGYKENVDIWSVGCIMGEMI 219
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 23/204 (11%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR----LAQERERE----FKSEVSAIGRTHHKN 564
LG G+ G V K + + K +A++ + + + RE + ++E+ + + +H
Sbjct: 143 LGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 201
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
++++ F D A + +V E M G L + + + ++ + YLHE
Sbjct: 202 IIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN-- 258
Query: 625 VPIIHCDIKPQNILLDNYFS---AKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
IIH D+KP+N+LL + KI+DFG SK +L + S T+ GT Y+APE +
Sbjct: 259 -GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-ILGETSLMRTLC-GTPTYLAPEVLVS 315
Query: 682 ---APVSAKVDVYSFGVMLLEIIC 702
A + VD +S GV+L IC
Sbjct: 316 VGTAGYNRAVDCWSLGVILF--IC 337
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER--EREFKSEVSAIGRTHHKNLVQL-- 568
+G G++G+V + + +A+KK+ + +R + E+ + R H+N++ +
Sbjct: 35 IGEGAYGMVCSAY-DNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIND 92
Query: 569 ----------------LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEI 612
+ L +LL + + N + ++ +I
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY---------------QI 137
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR--GT 670
RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T + T
Sbjct: 138 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT 194
Query: 671 RGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
R Y APE N+ K +D++S G +L E++ R
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER--EREFKSEVSAIGRTHHKNLVQL-- 568
+G G++G+V + + +A+KK+ + +R + E+ + R H+N++ +
Sbjct: 36 IGEGAYGMVCSAY-DNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIND 93
Query: 569 ----------------LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEI 612
+ L +LL + + N + ++ +I
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY---------------QI 138
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR--GT 670
RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T + T
Sbjct: 139 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT 195
Query: 671 RGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
R Y APE N+ K +D++S G +L E++ R
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 27/206 (13%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQL 568
++LG G++ VYKG K + +A+K++ RL E + EVS + H N+V L
Sbjct: 8 DKLGEGTYATVYKGKSK-LTDNLVALKEI-RLEHEEGAPCTAIREVSLLKDLKHANIVTL 65
Query: 569 LGFCDEALNRLLVYEFMGN---------GTLANLIFAIPKPDWNLRVRISLEIARGLVYL 619
+ LV+E++ G + N+ N+++ + ++ RGL Y
Sbjct: 66 HDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINM--------HNVKLFL-FQLLRGLAYC 116
Query: 620 HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPE-W 678
H + ++H D+KPQN+L++ K++DFGL++ S ++T+ T Y P+
Sbjct: 117 HRQ---KVLHRDLKPQNLLINERGELKLADFGLAR-AKSIPTKTYDNEVVTLWYRPPDIL 172
Query: 679 FKNAPVSAKVDVYSFGVMLLEIICCR 704
+ S ++D++ G + E+ R
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER--EREFKSEVSAIGRTHHKNLVQL-- 568
+G G++G+V + + +A+KK+ + +R + E+ + R H+N++ +
Sbjct: 35 IGEGAYGMVCSAY-DNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIND 92
Query: 569 ----------------LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEI 612
+ L +LL + + N + ++ +I
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLY---------------QI 137
Query: 613 ARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR--GT 670
RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T + T
Sbjct: 138 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 671 RGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
R Y APE N+ K +D++S G +L E++ R
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 23/204 (11%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR----LAQERERE----FKSEVSAIGRTHHKN 564
LG G+ G V K + + K +A++ + + + RE + ++E+ + + +H
Sbjct: 157 LGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 215
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
++++ F D A + +V E M G L + + + ++ + YLHE
Sbjct: 216 IIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN-- 272
Query: 625 VPIIHCDIKPQNILLDNYFS---AKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
IIH D+KP+N+LL + KI+DFG SK +L + S T+ GT Y+APE +
Sbjct: 273 -GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-ILGETSLMRTLC-GTPTYLAPEVLVS 329
Query: 682 ---APVSAKVDVYSFGVMLLEIIC 702
A + VD +S GV+L IC
Sbjct: 330 VGTAGYNRAVDCWSLGVILF--IC 351
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 23/204 (11%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR----LAQERERE----FKSEVSAIGRTHHKN 564
LG G+ G V K + + K +A+K + + + RE + ++E+ + + +H
Sbjct: 18 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
++++ F D A + +V E M G L + + + ++ + YLHE
Sbjct: 77 IIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN-- 133
Query: 625 VPIIHCDIKPQNILLDNYFS---AKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
IIH D+KP+N+LL + KI+DFG SK +L + S T+ GT Y+APE +
Sbjct: 134 -GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-ILGETSLMRTLC-GTPTYLAPEVLVS 190
Query: 682 APVSA---KVDVYSFGVMLLEIIC 702
+ VD +S GV+L IC
Sbjct: 191 VGTAGYNRAVDCWSLGVILF--IC 212
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 611 EIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR-- 668
+I RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T +
Sbjct: 134 QILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 669 GTRGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
TR Y APE N+ K +D++S G +L E++ R
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 23/204 (11%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR----LAQERERE----FKSEVSAIGRTHHKN 564
LG G+ G V K + + K +A+K + + + RE + ++E+ + + +H
Sbjct: 17 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 75
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
++++ F D A + +V E M G L + + + ++ + YLHE
Sbjct: 76 IIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN-- 132
Query: 625 VPIIHCDIKPQNILLDNYFS---AKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
IIH D+KP+N+LL + KI+DFG SK +L + S T+ GT Y+APE +
Sbjct: 133 -GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-ILGETSLMRTLC-GTPTYLAPEVLVS 189
Query: 682 APVSA---KVDVYSFGVMLLEIIC 702
+ VD +S GV+L IC
Sbjct: 190 VGTAGYNRAVDCWSLGVILF--IC 211
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 23/204 (11%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR----LAQERERE----FKSEVSAIGRTHHKN 564
LG G+ G V K + + K +A+K + + + RE + ++E+ + + +H
Sbjct: 24 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 82
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
++++ F D A + +V E M G L + + + ++ + YLHE
Sbjct: 83 IIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN-- 139
Query: 625 VPIIHCDIKPQNILLDNYFS---AKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
IIH D+KP+N+LL + KI+DFG SK +L + S T+ GT Y+APE +
Sbjct: 140 -GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-ILGETSLMRTLC-GTPTYLAPEVLVS 196
Query: 682 APVSA---KVDVYSFGVMLLEIIC 702
+ VD +S GV+L IC
Sbjct: 197 VGTAGYNRAVDCWSLGVILF--IC 218
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 23/204 (11%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR----LAQERERE----FKSEVSAIGRTHHKN 564
LG G+ G V K + + K +A+K + + + RE + ++E+ + + +H
Sbjct: 18 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
++++ F D A + +V E M G L + + + ++ + YLHE
Sbjct: 77 IIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN-- 133
Query: 625 VPIIHCDIKPQNILLDNYFS---AKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
IIH D+KP+N+LL + KI+DFG SK +L + S T+ GT Y+APE +
Sbjct: 134 -GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-ILGETSLMRTLC-GTPTYLAPEVLVS 190
Query: 682 APVSA---KVDVYSFGVMLLEIIC 702
+ VD +S GV+L IC
Sbjct: 191 VGTAGYNRAVDCWSLGVILF--IC 212
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 23/204 (11%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDR----LAQERERE----FKSEVSAIGRTHHKN 564
LG G+ G V K + + K +A+K + + + RE + ++E+ + + +H
Sbjct: 18 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECN 624
++++ F D A + +V E M G L + + + ++ + YLHE
Sbjct: 77 IIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN-- 133
Query: 625 VPIIHCDIKPQNILLDNYFS---AKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKN 681
IIH D+KP+N+LL + KI+DFG SK +L + S T+ GT Y+APE +
Sbjct: 134 -GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-ILGETSLMRTLC-GTPTYLAPEVLVS 190
Query: 682 APVSA---KVDVYSFGVMLLEIIC 702
+ VD +S GV+L IC
Sbjct: 191 VGTAGYNRAVDCWSLGVILF--IC 212
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 513 LGRGSFGIV---YKGVLKSASGKAIAVKKLDRLAQEREREFKS--EVSAIGRTHHKNLVQ 567
+G G+ GIV Y +L+ + +A+KKL R Q + ++ E+ + +HKN++
Sbjct: 34 IGSGAQGIVCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 89
Query: 568 LLGF------CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
LL +E + +V E M ANL I + R+ L ++ G+ +LH
Sbjct: 90 LLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKHLH 145
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ IIH D+KP NI++ + + KI DFGL++ + S TR Y APE
Sbjct: 146 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMVPFVVTRYYRAPEVIL 200
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
VD++S G ++ E+I
Sbjct: 201 GMGYKENVDIWSVGCIMGEMI 221
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 611 EIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR-- 668
+I RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T +
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 669 GTRGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
TR Y APE N+ K +D++S G +L E++ R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 14/196 (7%)
Query: 513 LGRGSFGIVYKGVLKSAS--GKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQLL 569
+G G FG V++G+ S A+A+K + RE F E + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 570 GFCDEALNRLLVYEFMGNGTLANL--IFAIPKPDWNLRVRI--SLEIARGLVYLHEECNV 625
G E V+ M TL L + K +L I + +++ L YL +
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK--- 130
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+H DI +N+L+ + K+ DFGLS+ + + + ++APE +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFT 190
Query: 686 AKVDVYSFGVMLLEII 701
+ DV+ FGV + EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 513 LGRGSFGIVYKGVLKSAS--GKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQLL 569
+G G FG V++G+ S A+A+K + RE F E + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 570 GFCDEALNRLLVYEFMGNGTLANL--IFAIPKPDWNLRVRI--SLEIARGLVYLHEECNV 625
G E V+ M TL L + K +L I + +++ L YL +
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 130
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-----YVAPEWFK 680
+H DI +N+L+ + K+ DFGLS+ + T + ++G ++APE
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESIN 185
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
++ DV+ FGV + EI+
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 37/220 (16%)
Query: 509 FKEELGRGSFGIVYKGVLKS----ASGKAIAVKKLDRLA-------------------QE 545
K+E+G+GS+G+V ++ + K ++ KKL R A Q
Sbjct: 17 LKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQP 76
Query: 546 RE--REFKSEVSAIGRTHHKNLVQLLGFCDEAL--NRLLVYEFMGNGTLANLIFAIPKPD 601
R + E++ + + H N+V+L+ D+ + +V+E + G + + P +
Sbjct: 77 RGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSE 136
Query: 602 WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLS-KLLLSDQ 660
R ++ +G+ YLH + IIH DIKP N+L+ KI+DFG+S + SD
Sbjct: 137 DQARFYFQ-DLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 661 SRTHTMIRGTRGYVAPEWFKNA--PVSAK-VDVYSFGVML 697
++T+ GT ++APE S K +DV++ GV L
Sbjct: 193 LLSNTV--GTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 611 EIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIR-- 668
+I RGL Y+H + ++H D+KP N+LL+ KI DFGL+++ D T +
Sbjct: 134 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 669 GTRGYVAPEWFKNAPVSAK-VDVYSFGVMLLEIICCR 704
TR Y APE N+ K +D++S G +L E++ R
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 124/283 (43%), Gaps = 45/283 (15%)
Query: 510 KEELGRGSFG-IVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRT-HHKNLVQ 567
K+ LG G+ G IVY+G+ + + +AVK R+ E EV + + H N+++
Sbjct: 29 KDVLGHGAEGTIVYRGMFDN---RDVAVK---RILPECFSFADREVQLLRESDEHPNVIR 82
Query: 568 LLGFCDEALNRLLVYEF-MGNGTLANLIFAIPKPDWNLR-VRISLEIARGLVYLHEECNV 625
FC E + + TL + L + + + GL +LH ++
Sbjct: 83 Y--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SL 137
Query: 626 PIIHCDIKPQNILLD-----NYFSAKISDFGLSKLLLSDQS--RTHTMIRGTRGYVAPEW 678
I+H D+KP NIL+ A ISDFGL K L + + + GT G++APE
Sbjct: 138 NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEM 197
Query: 679 F----KNAPVSAKVDVYSFGVMLLEIIC-CRRSVEMEVEEEGRAILTDWAYDC-YAEGRL 732
K P + VD++S G + +I ++ + +L + DC + E
Sbjct: 198 LSEDCKENP-TYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHE 256
Query: 733 DVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQ 775
DV+ R ++K MIAM DP KRP+ K VL+
Sbjct: 257 DVIA---------RELIEK--MIAM-----DPQKRPSAKHVLK 283
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 22/196 (11%)
Query: 511 EELGRGSFGIVYKGVLKSAS----GKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLV 566
E+LGRG FGIV++ V S+ K + VK D++ K E+S + H+N++
Sbjct: 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL------VKKEISILNIARHRNIL 64
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVYLHEECN 624
L + ++++EF+ + I + N R +S ++ L +LH
Sbjct: 65 HLHESFESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFLHSH-- 121
Query: 625 VPIIHCDIKPQNILLDNYFSA--KISDFGLSKLLL-SDQSRTHTMIRGTRGYVAPEWFKN 681
I H DI+P+NI+ S+ KI +FG ++ L D R ++ Y APE ++
Sbjct: 122 -NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR---LLFTAPEYYAPEVHQH 177
Query: 682 APVSAKVDVYSFGVML 697
VS D++S G ++
Sbjct: 178 DVVSTATDMWSLGTLV 193
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 513 LGRGSFGIVYKGVLKSAS--GKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQLL 569
+G G FG V++G+ S A+A+K + RE F E + + H ++V+L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 570 GFCDEALNRLLVYEFMGNGTLANL--IFAIPKPDWNLRVRI--SLEIARGLVYLHEECNV 625
G E V+ M TL L + K +L I + +++ L YL +
Sbjct: 81 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 133
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-----YVAPEWFK 680
+H DI +N+L+ + K+ DFGLS+ + T + ++G ++APE
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESIN 188
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
++ DV+ FGV + EI+
Sbjct: 189 FRRFTSASDVWMFGVCMWEIL 209
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 513 LGRGSFGIVYKGVLKSAS--GKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQLL 569
+G G FG V++G+ S A+A+K + RE F E + + H ++V+L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 570 GFCDEALNRLLVYEFMGNGTLANL--IFAIPKPDWNLRVRI--SLEIARGLVYLHEECNV 625
G E V+ M TL L + K +L I + +++ L YL +
Sbjct: 80 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 132
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-----YVAPEWFK 680
+H DI +N+L+ + K+ DFGLS+ + T + ++G ++APE
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESIN 187
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
++ DV+ FGV + EI+
Sbjct: 188 FRRFTSASDVWMFGVCMWEIL 208
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 513 LGRGSFGIVYKGVLKSAS--GKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQLL 569
+G G FG V++G+ S A+A+K + RE F E + + H ++V+L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 570 GFCDEALNRLLVYEFMGNGTLANL--IFAIPKPDWNLRVRI--SLEIARGLVYLHEECNV 625
G E V+ M TL L + K +L I + +++ L YL +
Sbjct: 75 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 127
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-----YVAPEWFK 680
+H DI +N+L+ + K+ DFGLS+ + T + ++G ++APE
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESIN 182
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
++ DV+ FGV + EI+
Sbjct: 183 FRRFTSASDVWMFGVCMWEIL 203
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERERE---FKSEVSAIGRTHHKNLVQLL 569
+GRG+FG V LK+A K A+K L++ + E F+ E + K + L
Sbjct: 82 IGRGAFGEVAVVKLKNAD-KVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLH 140
Query: 570 GFCDEALNRLLVYEFMGNGTLANLI--FAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
+ N LV ++ G L L+ F P+ R ++ E+ + +H+ +
Sbjct: 141 YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLA-EMVIAIDSVHQ---LHY 196
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK-----NA 682
+H DIKP NIL+D +++DFG L+ D + ++ GT Y++PE +
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKG 256
Query: 683 PVSAKVDVYSFGVMLLEII 701
+ D +S GV + E++
Sbjct: 257 RYGPECDWWSLGVCMYEML 275
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 513 LGRGSFGIVYKGVLKSAS--GKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQLL 569
+G G FG V++G+ S A+A+K + RE F E + + H ++V+L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 570 GFCDEALNRLLVYEFMGNGTLANL--IFAIPKPDWNLRVRI--SLEIARGLVYLHEECNV 625
G E V+ M TL L + K +L I + +++ L YL +
Sbjct: 106 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 158
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-----YVAPEWFK 680
+H DI +N+L+ + K+ DFGLS+ + T + ++G ++APE
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESIN 213
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
++ DV+ FGV + EI+
Sbjct: 214 FRRFTSASDVWMFGVCMWEIL 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V SG A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXL-XGTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 19/202 (9%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLA-QEREREFKSEVSAIGRTHHKNLVQLL 569
E LG G++ V +G + +GK AVK +++ A R R F+ + +KN+++L+
Sbjct: 19 ELLGEGAYAKV-QGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
F ++ LV+E + G++ I + R+ ++A L +LH + I H
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTK---GIAH 134
Query: 630 CDIKPQNILLDN---YFSAKISDFGLSKLLLSDQSRTH------TMIRGTRGYVAPEWFK 680
D+KP+NIL ++ KI DF L + + S T T G+ Y+APE +
Sbjct: 135 RDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVE 194
Query: 681 NAPVSA-----KVDVYSFGVML 697
A + D++S GV+L
Sbjct: 195 VFTDQATFYDKRCDLWSLGVVL 216
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V SG A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLA-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 24/201 (11%)
Query: 513 LGRGSFGIVYKGVLKSAS--GKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQLL 569
+G G FG V++G+ S A+A+K + RE F E + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 570 GFCDEALNRLLVYEFMGNGTLANL--IFAIPKPDWNLRVRI--SLEIARGLVYLHEECNV 625
G E V+ M TL L + K +L I + +++ L YL +
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK--- 130
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-----YVAPEWFK 680
+H DI +N+L+ K+ DFGLS+ + T + ++G ++APE
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESIN 185
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
++ DV+ FGV + EI+
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 19/201 (9%)
Query: 514 GRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC- 572
G+G+FG V G KS +G ++A+KK+ + + R RE + + + HH N+VQL +
Sbjct: 32 GQGTFGTVQLGKEKS-TGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNIVQLQSYFY 89
Query: 573 --------DEALNRLLVY--EFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEE 622
D LN ++ Y + + + P ++V + ++ R + LH
Sbjct: 90 TLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFL-FQLIRSIGCLHLP 148
Query: 623 CNVPIIHCDIKPQNILLDNY-FSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW-FK 680
+V + H DIKP N+L++ + K+ DFG +K L S + +R Y APE F
Sbjct: 149 -SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL--SPSEPNVAYICSRYYRAPELIFG 205
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
N + VD++S G + E++
Sbjct: 206 NQHYTTAVDIWSVGCIFAEMM 226
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 513 LGRGSFGIVYKGVLKSAS--GKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQLL 569
+G G FG V++G+ S A+A+K + RE F E + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 570 GFCDEALNRLLVYEFMGNGTLANL--IFAIPKPDWNLRVRI--SLEIARGLVYLHEECNV 625
G E V+ M TL L + K +L I + +++ L YL +
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 130
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-----YVAPEWFK 680
+H DI +N+L+ + K+ DFGLS+ + T + ++G ++APE
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESIN 185
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
++ DV+ FGV + EI+
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 26/219 (11%)
Query: 499 YNELKEATGGFKEELGRGSFGIVYKGVLKSASG------KAIAVKKLDRLAQEREREFKS 552
+++++ F E LG+G+F ++KGV + + +K LD+ + F
Sbjct: 2 FHKIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFE 61
Query: 553 EVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWN-LRVRISLE 611
S + + HK+LV G C +LV EF+ G+L + K + N + + LE
Sbjct: 62 AASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYL----KKNKNCINILWKLE 117
Query: 612 IARGLVY-LHEECNVPIIHCDIKPQNILL--------DNYFSAKISDFGLSKLLLSDQSR 662
+A+ L + +H +IH ++ +NILL N K+SD G+S +L
Sbjct: 118 VAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD-- 175
Query: 663 THTMIRGTRGYVAPEWFKNAP-VSAKVDVYSFGVMLLEI 700
+++ +V PE +N ++ D +SFG L EI
Sbjct: 176 ---ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEI 211
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V SG A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 501 ELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGR- 559
EL E + L G F VY+ SG+ A+K+L +E+ R EV + +
Sbjct: 24 ELGELRLRVRRVLAEGGFAFVYEAQ-DVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKL 82
Query: 560 THHKNLVQLLGFC----------DEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRV 606
+ H N+VQ FC D L+ + G L + + + +
Sbjct: 83 SGHPNIVQ---FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVL 139
Query: 607 RISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLL-------SD 659
+I + R + ++H + PIIH D+K +N+LL N + K+ DFG + + S
Sbjct: 140 KIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSA 198
Query: 660 QSRTHTMIRGTRG----YVAPE---WFKNAPVSAKVDVYSFGVMLLEIICCRR 705
Q R TR Y PE + N P+ K D+++ G +L ++C R+
Sbjct: 199 QRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY-LLCFRQ 250
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 513 LGRGSFGIVYKGVLKSAS--GKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQLL 569
+G G FG V++G+ S A+A+K + RE F E + + H ++V+L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 570 GFCDEALNRLLVYEFMGNGTLANL--IFAIPKPDWNLRVRI--SLEIARGLVYLHEECNV 625
G E V+ M TL L + K +L I + +++ L YL +
Sbjct: 83 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 135
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-----YVAPEWFK 680
+H DI +N+L+ + K+ DFGLS+ + T + ++G ++APE
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESIN 190
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
++ DV+ FGV + EI+
Sbjct: 191 FRRFTSASDVWMFGVCMWEIL 211
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 26/205 (12%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQL 568
+G G++G V + K SG+ +A+KKL R Q +R ++ E+ + H+N++ L
Sbjct: 31 HVGSGAYGSVCSAIDKR-SGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGL 88
Query: 569 LGFCDEA------LNRLLVYEFMGNG--TLANLIFAIPKPDWNLRVRISLEIARGLVYLH 620
L A + LV FM + L F+ K + + ++ +GL Y+H
Sbjct: 89 LDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLKGLKYIH 143
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ ++H D+KP N+ ++ KI DFGL++ +D T ++ TR Y APE
Sbjct: 144 ---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMTGYVV--TRWYRAPEVIL 196
Query: 681 N-APVSAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ +
Sbjct: 197 SWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V SG A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V SG A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V SG A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V SG A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEI 700
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEM 231
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQE--REREFKSEVSAIGRTHHKNLV 566
K LG G++G+V K +G+ +A+KK++ + R + E+ + H+N++
Sbjct: 15 LKSLLGEGAYGVVCSATHK-PTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENII 72
Query: 567 QLLGF----CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEE 622
+ E N + + + + L +I D +++ I + R + LH
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRAVKVLHGS 131
Query: 623 CNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL---LSDQSRTHTMIRGTRGYVAPEWF 679
+IH D+KP N+L+++ K+ DFGL++++ +D S G +VA W+
Sbjct: 132 N---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY 188
Query: 680 K-------NAPVSAKVDVYSFGVMLLEIICCR 704
+ +A S +DV+S G +L E+ R
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V SG A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V SG A+K LD+ + ++ + +E + + LV+L
Sbjct: 50 LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 109 FSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 220
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 221 DWWALGVLIYEMAA 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 23/199 (11%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V SG A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLI-----FAIPKPDWNLRVRISLEIARGLVYLHEEC 623
F D + N +V E++ G + + + FA P + + +I YLH
Sbjct: 108 FSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-----YAAQIVLTFEYLH--- 158
Query: 624 NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAP 683
++ +I+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKG 214
Query: 684 VSAKVDVYSFGVMLLEIIC 702
+ VD ++ GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEMAA 233
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
LG+G F Y+ + +GK + L L ++ + +E++ + ++V
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSML--LKPHQKEKMSTEIAIHKSLDNPHVVGF 91
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIF---AIPKPDWNLRVRISLEIARGLVYLHEECNV 625
GF ++ +V E +L L A+ +P+ +R +++ G+ YLH N
Sbjct: 92 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ---GVQYLH---NN 145
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+IH D+K N+ L++ KI DFGL+ + D R + GT Y+APE S
Sbjct: 146 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC-GTPNYIAPEVLCKKGHS 204
Query: 686 AKVDVYSFGVMLLEIICCRRSVEMEVEEE 714
+VD++S G +L ++ + E +E
Sbjct: 205 FEVDIWSLGCILYTLLVGKPPFETSCLKE 233
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V SG A+K LD+ + ++ + +E + + LV+L
Sbjct: 44 LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 102
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 103 FSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLI 158
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 159 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 214
Query: 689 DVYSFGVMLLEI 700
D ++ GV++ E+
Sbjct: 215 DWWALGVLIYEM 226
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V SG A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V SG A+K LD+ + ++ + +E + + LV+L
Sbjct: 36 LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 94
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 95 FSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 150
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 151 YRDLKPENLLIDEQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 206
Query: 689 DVYSFGVMLLEI 700
D ++ GV++ E+
Sbjct: 207 DWWALGVLIYEM 218
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 513 LGRGSFGIVYKGVLKSAS--GKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQLL 569
+G G FG V++G+ S A+A+K + RE F E + + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 570 GFCDEALNRLLVYEFMGNGTLANL--IFAIPKPDWNLRVRI--SLEIARGLVYLHEECNV 625
G E V+ M TL L + K +L I + +++ L YL +
Sbjct: 458 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK--- 510
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-----YVAPEWFK 680
+H DI +N+L+ + K+ DFGLS+ + T + ++G ++APE
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESIN 565
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
++ DV+ FGV + EI+
Sbjct: 566 FRRFTSASDVWMFGVCMWEIL 586
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V SG A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + +E + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E+ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+++D K++DFGL+K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGLAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
LG+G F Y+ + +GK + L L ++ + +E++ + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSML--LKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIF---AIPKPDWNLRVRISLEIARGLVYLHEECNV 625
GF ++ +V E +L L A+ +P+ +R +++ G+ YLH N
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ---GVQYLH---NN 161
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+IH D+K N+ L++ KI DFGL+ + D R + GT Y+APE S
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLC-GTPNYIAPEVLCKKGHS 220
Query: 686 AKVDVYSFGVMLLEIICCRRSVEMEVEEE 714
+VD++S G +L ++ + E +E
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFETSCLKE 249
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 513 LGRGSFGIVYK----GVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
LG+G F Y+ + +GK + L L ++ + +E++ + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSML--LKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIF---AIPKPDWNLRVRISLEIARGLVYLHEECNV 625
GF ++ +V E +L L A+ +P+ +R +++ G+ YLH N
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ---GVQYLH---NN 161
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
+IH D+K N+ L++ KI DFGL+ + D R + GT Y+APE S
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC-GTPNYIAPEVLCKKGHS 220
Query: 686 AKVDVYSFGVMLLEIICCRRSVEMEVEEE 714
+VD++S G +L ++ + E +E
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFETSCLKE 249
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 97/192 (50%), Gaps = 13/192 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 35 LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 93
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 94 FSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 149
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT T+ GT Y+APE + + V
Sbjct: 150 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWTLC-GTPEYLAPEIILSKGYNKAV 205
Query: 689 DVYSFGVMLLEI 700
D ++ GV++ E+
Sbjct: 206 DWWALGVLIYEM 217
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 50 LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 109 FSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT T+ GT Y+APE + + V
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWTLC-GTPEYLAPEIILSKGYNKAV 220
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 221 DWWALGVLIYEMAA 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
+G GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 IGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E+M G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D K++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEI 700
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEM 231
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQE--REREFKSEVSAIGRTHHKNLV 566
K LG G++G+V K +G+ +A+KK++ + R + E+ + H+N++
Sbjct: 15 LKSLLGEGAYGVVCSATHK-PTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENII 72
Query: 567 QLLGF----CDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEE 622
+ E N + + + + L +I D +++ I + R + LH
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRAVKVLHGS 131
Query: 623 CNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL---------LSDQSRTHTMIRGTRGY 673
+IH D+KP N+L+++ K+ DFGL++++ + Q T TR Y
Sbjct: 132 N---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWY 188
Query: 674 VAPE-WFKNAPVSAKVDVYSFGVMLLEIICCR 704
APE +A S +DV+S G +L E+ R
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
+G GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 IGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E+M G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D K++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V SG A+K LD+ + ++ + +E + + LV+L
Sbjct: 70 LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 128
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 129 FSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLI 184
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 240
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 241 DWWALGVLIYEMAA 254
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 24/201 (11%)
Query: 513 LGRGSFGIVYKGVLKSAS--GKAIAVKKLDRLAQERERE-FKSEVSAIGRTHHKNLVQLL 569
+G G FG V++G+ S A+A+K + RE F E + + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 570 GFCDEALNRLLVYEFMGNGTLANL--IFAIPKPDWNLRVRI--SLEIARGLVYLHEECNV 625
G E V+ M TL L + K +L I + +++ L YL +
Sbjct: 458 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK--- 510
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRG-----YVAPEWFK 680
+H DI +N+L+ K+ DFGLS+ + T + ++G ++APE
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESIN 565
Query: 681 NAPVSAKVDVYSFGVMLLEII 701
++ DV+ FGV + EI+
Sbjct: 566 FRRFTSASDVWMFGVCMWEIL 586
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 100/205 (48%), Gaps = 26/205 (12%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER---EREFKSEVSAIGRTHHKNLVQL 568
+G G++G V + K SG+ +A+KKL R Q +R ++ E+ + H+N++ L
Sbjct: 49 HVGSGAYGSVCSAIDKR-SGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGL 106
Query: 569 LGFCDEA------LNRLLVYEFMGNG--TLANLIFAIPKPDWNLRVRISLEIARGLVYLH 620
L A + LV FM + + F+ K + + ++ +GL Y+H
Sbjct: 107 LDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKGLKYIH 161
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ ++H D+KP N+ ++ KI DFGL++ +D T ++ TR Y APE
Sbjct: 162 ---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMTGYVV--TRWYRAPEVIL 214
Query: 681 N-APVSAKVDVYSFGVMLLEIICCR 704
+ + VD++S G ++ E++ +
Sbjct: 215 SWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 606 VRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSR--- 662
+ I ++IA + +LH + ++H D+KP NI K+ DFGL + D+
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 663 --------THTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEII 701
TH GT+ Y++PE S KVD++S G++L E++
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 33/211 (15%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDR--------LAQEREREFKSEVSAIGRTHH 562
E +G+G F +V + + +G+ AVK +D L+ E + K E S H
Sbjct: 30 EVIGKGPFSVVRR-CINRETGQQFAVKIVDVAKFTSSPGLSTE---DLKREASICHMLKH 85
Query: 563 KNLVQLLGFCDEALNRLLVYEFMGNGTL---------ANLIFAIPKPDWNLRVRISLEIA 613
++V+LL +V+EFM L A +++ +R +I
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR-----QIL 140
Query: 614 RGLVYLHEECNVPIIHCDIKPQNILL---DNYFSAKISDFGLSKLLLSDQSRTHTMIRGT 670
L Y H+ IIH D+KP +LL +N K+ FG++ + L + GT
Sbjct: 141 EALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVAGGRVGT 196
Query: 671 RGYVAPEWFKNAPVSAKVDVYSFGVMLLEII 701
++APE K P VDV+ GV+L ++
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILL 227
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 33/211 (15%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDR--------LAQEREREFKSEVSAIGRTHH 562
E +G+G F +V + + +G+ AVK +D L+ E + K E S H
Sbjct: 32 EVIGKGPFSVVRR-CINRETGQQFAVKIVDVAKFTSSPGLSTE---DLKREASICHMLKH 87
Query: 563 KNLVQLLGFCDEALNRLLVYEFMGNGTL---------ANLIFAIPKPDWNLRVRISLEIA 613
++V+LL +V+EFM L A +++ +R +I
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR-----QIL 142
Query: 614 RGLVYLHEECNVPIIHCDIKPQNILL---DNYFSAKISDFGLSKLLLSDQSRTHTMIRGT 670
L Y H+ IIH D+KP +LL +N K+ FG++ + L + GT
Sbjct: 143 EALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVAGGRVGT 198
Query: 671 RGYVAPEWFKNAPVSAKVDVYSFGVMLLEII 701
++APE K P VDV+ GV+L ++
Sbjct: 199 PHFMAPEVVKREPYGKPVDVWGCGVILFILL 229
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V SG A+K LD+ + ++ + +E + + LV+L
Sbjct: 70 LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 128
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 129 FSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 184
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + T T+ GT Y+APE + + V
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGATWTLC-GTPEYLAPEIILSKGYNKAV 240
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 241 DWWALGVLIYEMAA 254
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 32/212 (15%)
Query: 509 FKEELGRGSFGIVYKGVLKSASG------KAIAVKKLDRLAQEREREFKSEVSAIGRTHH 562
F E LG+G+F ++KGV + + +K LD+ + F S + + H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 563 KNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNL-----RVRISLEIARGLV 617
K+LV G C +LV EF+ G+L + K + N ++ ++ ++A +
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYL----KKNKNCINILWKLEVAKQLAAAMH 127
Query: 618 YLHEECNVPIIHCDIKPQNILL--------DNYFSAKISDFGLSKLLLSDQSRTHTMIRG 669
+L E +IH ++ +NILL N K+SD G+S +L +++
Sbjct: 128 FLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD-----ILQE 179
Query: 670 TRGYVAPEWFKNAP-VSAKVDVYSFGVMLLEI 700
+V PE +N ++ D +SFG L EI
Sbjct: 180 RIPWVPPECIENPKNLNLATDKWSFGTTLWEI 211
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V SG A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+++D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLIIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIIISKGYNKAV 219
Query: 689 DVYSFGVMLLEI 700
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEM 231
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V SG A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ ++
Sbjct: 220 DWWALGVLIYQMAA 233
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + +E + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E+ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+++D +++DFGL+K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGLAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 22/202 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER----EREFKSEVSAIGRTHHKNLVQL 568
LG GS+G V K VL S + AVK L + R E K E+ + R HKN++QL
Sbjct: 13 LGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71
Query: 569 LG--FCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL--EIARGLVYLHEECN 624
+ + +E +V E+ G + ++ ++P+ + + ++ GL YLH +
Sbjct: 72 VDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG- 129
Query: 625 VPIIHCDIKPQNILLDNYFSAKISDFGLSKLL----LSDQSRTHTMIRGTRGYVAPEWFK 680
I+H DIKP N+LL + KIS G+++ L D RT +G+ + PE
Sbjct: 130 --IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS---QGSPAFQPPEIAN 184
Query: 681 NAPVSA--KVDVYSFGVMLLEI 700
+ KVD++S GV L I
Sbjct: 185 GLDTFSGFKVDIWSAGVTLYNI 206
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 126/265 (47%), Gaps = 28/265 (10%)
Query: 513 LGRGSFGIVY--KGVLKSASGKAIAVKKLDR--LAQERE--REFKSEVSAIGRTHHKNLV 566
LG G++G V+ + + +GK A+K L + + Q+ + ++E + +
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 567 QLLGFCDEALNRL-LVYEFMGNGTLANLIFAIPK-PDWNLRVRISLEIARGLVYLHEECN 624
L + + +L L+ +++ G L + + + +++ + EI L +LH+
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVG-EIVLALEHLHK--- 177
Query: 625 VPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK--NA 682
+ II+ DIK +NILLD+ ++DFGLSK ++D++ GT Y+AP+ + ++
Sbjct: 178 LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDS 237
Query: 683 PVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPA 742
VD +S GV++ E++ ++ E+ +A ++ ++ S+ P
Sbjct: 238 GHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRR------------ILKSEPPY 285
Query: 743 MADRSRLQKWLMIAMWCIREDPSKR 767
+ S L K L+ + +DP KR
Sbjct: 286 PQEMSALAKDLI--QRLLMKDPKKR 308
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQLL 569
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
+ N +V E++ G + + + I + + +I YLH ++ +I+
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIY 164
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + VD
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAVD 220
Query: 690 VYSFGVMLLEIIC 702
++ GV++ E+
Sbjct: 221 WWALGVLIYEMAA 233
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQLL 569
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
+ N +V E++ G + + + I + + +I YLH ++ +I+
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIY 164
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + VD
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAVD 220
Query: 690 VYSFGVMLLEIIC 702
++ GV++ E+
Sbjct: 221 WWALGVLIYEMAA 233
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQLL 569
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIH 629
+ N +V E++ G + + + I + + +I YLH ++ +I+
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIY 164
Query: 630 CDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVD 689
D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + VD
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAVD 220
Query: 690 VYSFGVMLLEIIC 702
++ GV++ E+
Sbjct: 221 WWALGVLIYEMAA 233
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 137/307 (44%), Gaps = 46/307 (14%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLD-RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
E +G+G +G V++G+ G+++AVK R Q RE +E+ H N+ L
Sbjct: 14 ECVGKGRYGEVWRGLWH---GESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNI---L 65
Query: 570 GFC-------DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEE 622
GF + + L+ + +G+L + + + +L +R+++ A GL +LH E
Sbjct: 66 GFIASDMTSRNSSTQLWLITHYHEHGSLYDFL-QRQTLEPHLALRLAVSAACGLAHLHVE 124
Query: 623 C-----NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMI-----RGTRG 672
I H D K +N+L+ + I+D GL+ ++ Q + I GT+
Sbjct: 125 IFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA--VMHSQGSDYLDIGNNPRVGTKR 182
Query: 673 YVAPEWFKNAPVS------AKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYD- 725
Y+APE + D+++FG++L EI RR++ + E+ R D +
Sbjct: 183 YMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTIVNGIVEDYRPPFYDVVPND 240
Query: 726 -CYAEGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIRE----DPSKRPTMKVVLQMLEGL 780
+ + + V VD P + +R L +RE +PS R T L++ + L
Sbjct: 241 PSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLT---ALRIKKTL 297
Query: 781 LEVPNPP 787
++ N P
Sbjct: 298 QKISNSP 304
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 50 LGTGSFGRVML-VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 109 FSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 220
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 221 DWWALGVLIYEMAA 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 42 LGTGSFGRVML-VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 100
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 101 FSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 156
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 212
Query: 689 DVYSFGVMLLEI 700
D ++ GV++ E+
Sbjct: 213 DWWALGVLIYEM 224
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 10/201 (4%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G V+K K+ I K RL + E S E+ + HKN+V+
Sbjct: 8 EKIGEGTYGTVFKA--KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
L LV+EF D + ++ +GL + H +
Sbjct: 66 LHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---V 122
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV-SA 686
+H D+KPQN+L++ K++DFGL++ R ++ T Y P+ A + S
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLAR-AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 687 KVDVYSFGVMLLEIICCRRSV 707
+D++S G + E+ R +
Sbjct: 182 SIDMWSAGCIFAELANAARPL 202
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 50 LGTGSFGRVML-VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 109 FSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 220
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 221 DWWALGVLIYEMAA 234
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 95/194 (48%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V SG A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+AP + + V
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPAIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 50 LGTGSFGRVML-VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 109 FSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 220
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 221 DWWALGVLIYEMAA 234
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 97/240 (40%), Gaps = 54/240 (22%)
Query: 509 FKEELGRGSFGIVYKGVL-KSASGKAIAVKKLDRLAQERERE---FKSEVSAIGRTHHKN 564
K +G+GS+G+V + ++ + +AI + +++ Q ++ K+EV + + HH N
Sbjct: 30 LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPN 89
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAI------------------PKPDWN--- 603
+ +L ++ LV E G L + + P P+ N
Sbjct: 90 IARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEA 149
Query: 604 -------------------LRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILL--DNY 642
L I +I L YLH N I H DIKP+N L +
Sbjct: 150 INGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKS 206
Query: 643 FSAKISDFGLSK---LLLSDQSRTHTMIRGTRGYVAPEWFK--NAPVSAKVDVYSFGVML 697
F K+ DFGLSK L + + T GT +VAPE N K D +S GV+L
Sbjct: 207 FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 95/194 (48%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 50 LGTGSFGRVML-VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E+ G + + + I + + +I YLH ++ +I
Sbjct: 109 FSFKDNS-NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+++D K++DFG +K + + RT + GT Y+APE + + V
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 220
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 221 DWWALGVLIYEMAA 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 70 LGTGSFGRVML-VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 128
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 129 FSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 184
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 240
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 241 DWWALGVLIYEMAA 254
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 42 LGTGSFGRVML-VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 100
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 101 FSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLI 156
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 212
Query: 689 DVYSFGVMLLEI 700
D ++ GV++ E+
Sbjct: 213 DWWALGVLIYEM 224
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 607 RISLEIARGLVYLHEECNVPIIHCDIKPQNILL------DNYFSAKISDFGLSKLLLSDQ 660
+IS ++ GL Y+H C IIH DIKP+N+L+ +N KI+D G D+
Sbjct: 135 QISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLG--NACWYDE 190
Query: 661 SRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIIC 702
T+++ TR Y +PE AP D++S ++ E+I
Sbjct: 191 HYTNSI--QTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 230
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 607 RISLEIARGLVYLHEECNVPIIHCDIKPQNILL------DNYFSAKISDFGLSKLLLSDQ 660
+IS ++ GL Y+H C IIH DIKP+N+L+ +N KI+D G D+
Sbjct: 135 QISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLG--NACWYDE 190
Query: 661 SRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEIIC 702
T+++ TR Y +PE AP D++S ++ E+I
Sbjct: 191 HYTNSI--QTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 230
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
+G GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 IGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D K++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEI 700
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEM 231
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKN---LVQL- 568
LG GSFG V V +G A+K LD+ + ++ + ++ N LV+L
Sbjct: 50 LGTGSFGRVML-VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLE 108
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E+ G + + + I + + +I YLH ++ +I
Sbjct: 109 FSFKDNS-NLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D K++DFG +K + + RT + GT Y+APE + + V
Sbjct: 165 YRDLKPENLLIDQQGYIKVADFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 220
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 221 DWWALGVLIYEMAA 234
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 16/196 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
+GRGS+G V V K + A KK+ + E FK E+ + H N+++L
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRR-AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 75
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDI 632
++ + LV E G L + + RI ++ + Y H+ + + H D+
Sbjct: 76 EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDL 132
Query: 633 KPQNILL--DNYFSA-KISDFGLSKLLLSDQSRTHTMIR---GTRGYVAPEWFKNAPVSA 686
KP+N L D+ S K+ DFGL+ + + M+R GT YV+P+ +
Sbjct: 133 KPENFLFLTDSPDSPLKLIDFGLAA-----RFKPGKMMRTKVGTPYYVSPQVLEGL-YGP 186
Query: 687 KVDVYSFGVMLLEIIC 702
+ D +S GVM+ ++C
Sbjct: 187 ECDEWSAGVMMYVLLC 202
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKL--DRLAQERE----REFKSEVSAIGRTHH--KN 564
LG G FG VY G+ + + +A+K + DR++ E EV + +
Sbjct: 16 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 565 LVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC- 623
+++LL + + + +L+ E M + +L I + R + E+AR + E
Sbjct: 75 VIRLLDWFERPDSFVLILERME--PVQDLFDFITE-----RGALQEELARSFFWQVLEAV 127
Query: 624 ----NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 678
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEW 184
Query: 679 FKNAPVSAK-VDVYSFGVMLLEIIC 702
+ + V+S G++L +++C
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVC 209
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 50 LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 109 FSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 220
Query: 689 DVYSFGVMLLEI 700
D ++ GV++ E+
Sbjct: 221 DWWALGVLIYEM 232
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 21/209 (10%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDR---LAQEREREFKSEVSAIGRTHHKNLVQ 567
E +G G++G+V + +G+ +A+KK+ + +R + E+ + H N++
Sbjct: 61 ETIGNGAYGVV-SSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKHDNIIA 118
Query: 568 LLGFC------DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
+ E + +V + M L +I + +P VR L ++ RGL Y+H
Sbjct: 119 IKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHS-SQPLTLEHVRYFLYQLLRGLKYMH 176
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTH---TMIRGTRGYVAPE 677
+ +IH D+KP N+L++ KI DFG+++ L + + T TR Y APE
Sbjct: 177 ---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 233
Query: 678 WFKN-APVSAKVDVYSFGVMLLEIICCRR 705
+ + +D++S G + E++ R+
Sbjct: 234 LMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 16/196 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
+GRGS+G V V K + A KK+ + E FK E+ + H N+++L
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRR-AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 92
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDI 632
++ + LV E G L + + RI ++ + Y H+ + + H D+
Sbjct: 93 EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDL 149
Query: 633 KPQNILL--DNYFSA-KISDFGLSKLLLSDQSRTHTMIR---GTRGYVAPEWFKNAPVSA 686
KP+N L D+ S K+ DFGL+ + + M+R GT YV+P+ +
Sbjct: 150 KPENFLFLTDSPDSPLKLIDFGLAA-----RFKPGKMMRTKVGTPYYVSPQVLEGL-YGP 203
Query: 687 KVDVYSFGVMLLEIIC 702
+ D +S GVM+ ++C
Sbjct: 204 ECDEWSAGVMMYVLLC 219
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 95/194 (48%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E+ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+++D K++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEI 700
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEM 231
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 50 LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 109 FSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 220
Query: 689 DVYSFGVMLLEI 700
D ++ GV++ E+
Sbjct: 221 DWWALGVLIYEM 232
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 31 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 86
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 87 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 144
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 145 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 201
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVC 224
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 17 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 72
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 73 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 187
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVC 210
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 31 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 86
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 87 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 144
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 145 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 201
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVC 224
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 32 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 87
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 88 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 202
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVC 225
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 36/214 (16%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKN------LV 566
LG G+FG V + V G +A+K + + + +E + E++ + + + K+ V
Sbjct: 41 LGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAA-RLEINVLEKINEKDPDNKNLCV 99
Query: 567 QLLGFCDEALNRLLVYEFMGNGTLANLI--FAIPKPDWNLRVRISLEIARGLVYLHEECN 624
Q+ + D + + +E +G T L +P P +R ++ ++ + + +LH+
Sbjct: 100 QMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVR-HMAFQLCQAVKFLHDN-- 156
Query: 625 VPIIHCDIKPQNILLDNY-------------------FSAKISDFGLSKLLLSDQSRTHT 665
+ H D+KP+NIL N + ++ DFG + H+
Sbjct: 157 -KLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATF----DHEHHS 211
Query: 666 MIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLE 699
I TR Y APE S DV+S G ++ E
Sbjct: 212 TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFE 245
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 16 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 71
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 72 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 186
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVC 209
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 32 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 87
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 88 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 202
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVC 225
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 95/194 (48%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E+ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+++D K++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 17 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 72
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 73 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 187
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVC 210
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 32 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 87
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 88 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 202
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVC 225
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 12 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 68 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 182
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVC 205
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 12 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 68 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 126 CHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 182
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVC 205
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 59 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 114
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 115 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 229
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVC 252
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 12 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 68 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 182
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVC 205
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 15 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 70
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 71 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 128
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 129 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 185
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMVC 208
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 51 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 106
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 107 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 164
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 165 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 221
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 222 YHRYHGRSAAVWSLGILLYDMVC 244
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 17 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 72
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 73 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 187
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVC 210
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 95/194 (48%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V SG A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E++ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+L+D +++DFG +K + + RT + GT +APE + + V
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEALAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 45 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 101 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 215
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVC 238
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 44 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 100 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 214
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVC 237
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 21/209 (10%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDR---LAQEREREFKSEVSAIGRTHHKNLVQ 567
E +G G++G+V + +G+ +A+KK+ + +R + E+ + H N++
Sbjct: 60 ETIGNGAYGVV-SSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKHDNIIA 117
Query: 568 LLGFC------DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLH 620
+ E + +V + M L +I + +P VR L ++ RGL Y+H
Sbjct: 118 IKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHS-SQPLTLEHVRYFLYQLLRGLKYMH 175
Query: 621 EECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTH---TMIRGTRGYVAPE 677
+ +IH D+KP N+L++ KI DFG+++ L + + T TR Y APE
Sbjct: 176 ---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
Query: 678 WFKN-APVSAKVDVYSFGVMLLEIICCRR 705
+ + +D++S G + E++ R+
Sbjct: 233 LMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 39 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 94
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 95 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 152
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 153 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 209
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 210 YHRYHGRSAAVWSLGILLYDMVC 232
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 45 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 101 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 215
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVC 238
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 44 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 100 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 214
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVC 237
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 44 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 100 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 214
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVC 237
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 45 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 101 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 215
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVC 238
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 44 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 100 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 214
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVC 237
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 45 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 101 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 215
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVC 238
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 59 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 114
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 115 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 229
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVC 252
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 35/216 (16%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
+E +G+G FG V++G + G+ +AVK +ER ++E+ H+N+
Sbjct: 46 LQESIGKGRFGEVWRGKWR---GEEVAVKIFSS-REERSWFREAEIYQTVMLRHENI--- 98
Query: 569 LGF--CDEALNRL-----LVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHE 621
LGF D N LV ++ +G+L + + + ++++L A GL +LH
Sbjct: 99 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-IKLALSTASGLAHLHM 157
Query: 622 EC-----NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM------IRGT 670
E I H D+K +NIL+ + I+D GL+ + S T T+ GT
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGT 214
Query: 671 RGYVAPEWF------KNAPVSAKVDVYSFGVMLLEI 700
+ Y+APE K+ + D+Y+ G++ EI
Sbjct: 215 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 35/227 (15%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK-SEVSAIGRTHHKNLVQLL 569
+++G+G +G V+ G + G+ +AVK E F+ +E+ H+N+ L
Sbjct: 43 KQIGKGRYGEVWMGKWR---GEKVAVKVF--FTTEEASWFRETEIYQTVLMRHENI---L 94
Query: 570 GFCDEAL-------NRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEE 622
GF + L+ ++ NG+L + + + D ++++ GL +LH E
Sbjct: 95 GFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTE 153
Query: 623 C-----NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRT----HTMIRGTRGY 673
I H D+K +NIL+ + I+D GL+ +SD + +T + GT+ Y
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRY 212
Query: 674 VAPEWFKNA------PVSAKVDVYSFGVMLLEIICCRRSVEMEVEEE 714
+ PE + D+YSFG++L E+ RR V + EE
Sbjct: 213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGGIVEE 257
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 35/216 (16%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
+E +G+G FG V++G + G+ +AVK +ER ++E+ H+N+
Sbjct: 33 LQESIGKGRFGEVWRGKWR---GEEVAVKIFSS-REERSWFREAEIYQTVMLRHENI--- 85
Query: 569 LGF--CDEALNRL-----LVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHE 621
LGF D N LV ++ +G+L + + + ++++L A GL +LH
Sbjct: 86 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-IKLALSTASGLAHLHM 144
Query: 622 EC-----NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM------IRGT 670
E I H D+K +NIL+ + I+D GL+ + S T T+ GT
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGT 201
Query: 671 RGYVAPEWF------KNAPVSAKVDVYSFGVMLLEI 700
+ Y+APE K+ + D+Y+ G++ EI
Sbjct: 202 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 35/216 (16%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
+E +G+G FG V++G + G+ +AVK +ER ++E+ H+N+
Sbjct: 13 LQESIGKGRFGEVWRGKWR---GEEVAVKIFSS-REERSWFREAEIYQTVMLRHENI--- 65
Query: 569 LGF--CDEALNRL-----LVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHE 621
LGF D N LV ++ +G+L + + + ++++L A GL +LH
Sbjct: 66 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-IKLALSTASGLAHLHM 124
Query: 622 EC-----NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM------IRGT 670
E I H D+K +NIL+ + I+D GL+ + S T T+ GT
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGT 181
Query: 671 RGYVAPEWF------KNAPVSAKVDVYSFGVMLLEI 700
+ Y+APE K+ + D+Y+ G++ EI
Sbjct: 182 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 12/159 (7%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE--REFKSEVSAIGRTHHKNLV 566
K +GRGS+G VY K+A+ K +A+KK++R+ ++ + E++ + R ++
Sbjct: 32 IKHLIGRGSYGYVYLAYDKNAN-KNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYII 90
Query: 567 QL--LGFCDEAL--NRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLHE 621
+L L ++ L + L + + + L L F P V+ L + G ++HE
Sbjct: 91 RLHDLIIPEDLLKFDELYIVLEIADSDLKKL-FKTPIFLTEQHVKTILYNLLLGEKFIHE 149
Query: 622 ECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQ 660
IIH D+KP N LL+ S KI DFGL++ + SD+
Sbjct: 150 SG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDK 185
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFC 572
LG G FG VY G+ + + +A+K +++ +R ++ + L++ +
Sbjct: 64 LGSGGFGSVYSGI-RVSDNLPVAIKHVEK---DRISDWGELPNGTRVPMEVVLLKKVSSG 119
Query: 573 DEALNRLLVYEFMGNGTLANLIFAIPKPDWNL------RVRISLEIARGLVYLHEEC--- 623
+ RLL ++ LI P+P +L R + E+AR + E
Sbjct: 120 FSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 177
Query: 624 --NVPIIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
N ++H DIK +NIL+D N K+ DFG LL + +T GTR Y PEW +
Sbjct: 178 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIR 234
Query: 681 NAPVSAK-VDVYSFGVMLLEIIC 702
+ V+S G++L +++C
Sbjct: 235 YHRYHGRSAAVWSLGILLYDMVC 257
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 37/217 (17%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
+E +G+G FG V++G + G+ +AVK +ER ++E+ H+N+
Sbjct: 8 LQESIGKGRFGEVWRGKWR---GEEVAVKIFSS-REERSWFREAEIYQTVMLRHENI--- 60
Query: 569 LGFCDEALNR--------LLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLH 620
LGF A N+ LV ++ +G+L + + + ++++L A GL +LH
Sbjct: 61 LGFI-AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-IKLALSTASGLAHLH 118
Query: 621 EEC-----NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM------IRG 669
E I H D+K +NIL+ + I+D GL+ + S T T+ G
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVG 175
Query: 670 TRGYVAPEWF------KNAPVSAKVDVYSFGVMLLEI 700
T+ Y+APE K+ + D+Y+ G++ EI
Sbjct: 176 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 95/194 (48%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + LV+L
Sbjct: 49 LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E+ G + + + I + + +I YLH ++ +I
Sbjct: 108 FSFKDNS-NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 163
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+++D +++DFG +K + + RT + GT Y+APE + + V
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 219
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 220 DWWALGVLIYEMAA 233
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 37/217 (17%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
+E +G+G FG V++G + G+ +AVK +ER ++E+ H+N+
Sbjct: 7 LQESIGKGRFGEVWRGKWR---GEEVAVKIFSS-REERSWFREAEIYQTVMLRHENI--- 59
Query: 569 LGFCDEALNR--------LLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLH 620
LGF A N+ LV ++ +G+L + + + ++++L A GL +LH
Sbjct: 60 LGFI-AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-IKLALSTASGLAHLH 117
Query: 621 EEC-----NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM------IRG 669
E I H D+K +NIL+ + I+D GL+ + S T T+ G
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVG 174
Query: 670 TRGYVAPEWF------KNAPVSAKVDVYSFGVMLLEI 700
T+ Y+APE K+ + D+Y+ G++ EI
Sbjct: 175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 118/285 (41%), Gaps = 47/285 (16%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVK--KLDRLAQEREREFKSEVSAIGRTHHKNLV 566
F +L G ++KG + G I VK K+ + + R+F E + H N++
Sbjct: 14 FLTKLNENHSGELWKGRWQ---GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVL 70
Query: 567 QLLGFCDE--ALNRLLVYEFMGNGTLANLI-----FAIPKPDWNLRVRISLEIARGLVYL 619
+LG C A + L+ + G+L N++ F + D + V+ +L+ ARG +L
Sbjct: 71 PVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVV---DQSQAVKFALDXARGXAFL 127
Query: 620 HEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWF 679
H + H + +++ +D +A+IS + K R + +VAPE
Sbjct: 128 HTLEPLIPRHA-LNSRSVXIDEDXTARISXADV-KFSFQSPGRXYAP-----AWVAPEAL 180
Query: 680 KNAPVSA---KVDVYSFGVMLLEIICCRRSV---EMEVEEEGRAILTDWAYDCYAEGRLD 733
+ P D +SF V+L E++ R V ++ E G + EG
Sbjct: 181 QKKPEDTNRRSADXWSFAVLLWELVT--REVPFADLSNXEIGXKVAL--------EGLRP 230
Query: 734 VLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLE 778
+ P ++ ++ C EDP+KRP ++ +LE
Sbjct: 231 TIPPGISPHVSKLXKI---------CXNEDPAKRPKFDXIVPILE 266
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 35/216 (16%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
+E +G+G FG V++G + G+ +AVK +ER ++E+ H+N+
Sbjct: 10 LQESIGKGRFGEVWRGKWR---GEEVAVKIFSS-REERSWFREAEIYQTVMLRHENI--- 62
Query: 569 LGF--CDEALNRL-----LVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHE 621
LGF D N LV ++ +G+L + + + ++++L A GL +LH
Sbjct: 63 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-IKLALSTASGLAHLHM 121
Query: 622 EC-----NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTM------IRGT 670
E I H D+K +NIL+ + I+D GL+ + S T T+ GT
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGT 178
Query: 671 RGYVAPEWF------KNAPVSAKVDVYSFGVMLLEI 700
+ Y+APE K+ + D+Y+ G++ EI
Sbjct: 179 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + L +L
Sbjct: 50 LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE 108
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E+ G + + + I + + +I YLH ++ +I
Sbjct: 109 FSFKDNS-NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+++D K++DFG +K + + RT + GT Y+APE + + V
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 220
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 221 DWWALGVLIYEMAA 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + L +L
Sbjct: 50 LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE 108
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E+ G + + + I + + +I YLH ++ +I
Sbjct: 109 FSFKDNS-NLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+++D K++DFG +K + + RT + GT Y+APE + + V
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 220
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 221 DWWALGVLIYEMAA 234
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 10/194 (5%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKS---EVSAIGRTHHKNLVQ 567
E++G G++G V+K K+ I K RL + E S E+ + HKN+V+
Sbjct: 8 EKIGEGTYGTVFKA--KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 568 LLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPI 627
L LV+EF D + ++ +GL + H +
Sbjct: 66 LHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---V 122
Query: 628 IHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV-SA 686
+H D+KPQN+L++ K+++FGL++ R ++ T Y P+ A + S
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLAR-AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 687 KVDVYSFGVMLLEI 700
+D++S G + E+
Sbjct: 182 SIDMWSAGCIFAEL 195
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 13/194 (6%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFK---SEVSAIGRTHHKNLVQL- 568
LG GSFG V V +G A+K LD+ + ++ + +E + + L +L
Sbjct: 50 LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE 108
Query: 569 LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
F D + N +V E+ G + + + I + + +I YLH ++ +I
Sbjct: 109 FSFKDNS-NLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLI 164
Query: 629 HCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKV 688
+ D+KP+N+++D K++DFG +K + + RT + GT Y+APE + + V
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRV---KGRTWXLC-GTPEYLAPEIILSKGYNKAV 220
Query: 689 DVYSFGVMLLEIIC 702
D ++ GV++ E+
Sbjct: 221 DWWALGVLIYEMAA 234
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Query: 603 NLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDN--YFSAKISDFGLSKLLLSDQ 660
NL + + ++ L++L + IIHCD+KP+NILL N + KI DFG S L
Sbjct: 157 NLTRKFAQQMCTALLFL-ATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL---G 212
Query: 661 SRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
R + I+ +R Y +PE P +D++S G +L+E+
Sbjct: 213 QRIYQXIQ-SRFYRSPEVLLGMPYDLAIDMWSLGCILVEM 251
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Query: 603 NLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDN--YFSAKISDFGLSKLLLSDQ 660
NL + + ++ L++L + IIHCD+KP+NILL N + KI DFG S L
Sbjct: 138 NLTRKFAQQMCTALLFL-ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---G 193
Query: 661 SRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
R + I+ +R Y +PE P +D++S G +L+E+
Sbjct: 194 QRIYQXIQ-SRFYRSPEVLLGMPYDLAIDMWSLGCILVEM 232
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 16/196 (8%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLD---RLAQEREREFKSEVSAIGRTHHKNLVQLL 569
LG GS+G V+K V G+ AVK+ R ++R R+ S H V+L
Sbjct: 65 LGHGSYGEVFK-VRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLE 123
Query: 570 GFCDEALNRLLVYEFMGNGTLANLIF---AIPKPDWNLRVRISLEIARGLVYLHEECNVP 626
+E L E G + ++P+ +R +L L +LH +
Sbjct: 124 QAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTL---LALAHLHSQG--- 177
Query: 627 IIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSA 686
++H D+KP NI L K+ DFGL L+ + + G Y+APE + + +A
Sbjct: 178 LVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMAPELLQGSYGTA 235
Query: 687 KVDVYSFGVMLLEIIC 702
DV+S G+ +LE+ C
Sbjct: 236 -ADVFSLGLTILEVAC 250
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 121/308 (39%), Gaps = 44/308 (14%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL 568
F ++LG G F V V G A+K++ Q+ E + E +H N+++L
Sbjct: 33 FIQKLGEGGFSYV-DLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRL 91
Query: 569 LGFC----DEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVR-----ISLEIARGLVYL 619
+ +C L+ F GTL N I + K N + L I RGL +
Sbjct: 92 VAYCLRERGAKHEAWLLLPFFKRGTLWNEIERL-KDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 620 HEECNVPIIHCDIKPQNILLDNYFSAKISDFG-LSKLLLSDQSRTHTMI-------RGTR 671
H + H D+KP NILL + + D G +++ + + + R T
Sbjct: 151 HAKGYA---HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 672 GYVAPEWF---KNAPVSAKVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYA 728
Y APE F + + + DV+S G +L ++ +M ++ L
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA-------V 260
Query: 729 EGRLDVLVDSDEPAMADRSRLQKWLMIAMWCIREDPSKRPTMKVVLQMLEGLLEVPNPPC 788
+ +L + P S L+ +M + DP +RP + ++L LE L PP
Sbjct: 261 QNQLSI------PQSPRHSSALWQLLNSMMTV--DPHQRPHIPLLLSQLEAL----QPPA 308
Query: 789 PSSFSIAV 796
P + +
Sbjct: 309 PGQHTTQI 316
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 40/230 (17%)
Query: 509 FKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE--REFKSEVSAIGRTHHKNLV 566
K +GRGS+G VY K+ K +A+KK++R+ ++ + E++ + R ++
Sbjct: 30 IKHLIGRGSYGYVYLAYDKNTE-KNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYII 88
Query: 567 QL--LGFCDEAL--NRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLHE 621
+L L D+ L + L + + + L L F P ++ L + G ++HE
Sbjct: 89 RLYDLIIPDDLLKFDELYIVLEIADSDLKKL-FKTPIFLTEEHIKTILYNLLLGENFIHE 147
Query: 622 ECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL------------------------L 657
IIH D+KP N LL+ S K+ DFGL++ + L
Sbjct: 148 SG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL 204
Query: 658 SDQSRTHTMIRGTRGYVAPEW-FKNAPVSAKVDVYSFGVMLLEIICCRRS 706
Q +H + TR Y APE + +D++S G + E++ +S
Sbjct: 205 KKQLTSHVV---TRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Query: 603 NLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDN--YFSAKISDFGLSKLLLSDQ 660
NL + + ++ L++L + IIHCD+KP+NILL N + KI DFG S L
Sbjct: 157 NLTRKFAQQMCTALLFL-ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---G 212
Query: 661 SRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLEI 700
R + I+ +R Y +PE P +D++S G +L+E+
Sbjct: 213 QRIYQXIQ-SRFYRSPEVLLGMPYDLAIDMWSLGCILVEM 251
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 627 IIHCDIKPQNILLDNYFSA--KISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIHCD+KP+NILL + K+ DFG S + R +T I+ +R Y APE A
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTXIQ-SRFYRAPEVILGARY 276
Query: 685 SAKVDVYSFGVMLLEII 701
+D++S G +L E++
Sbjct: 277 GMPIDMWSLGCILAELL 293
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 627 IIHCDIKPQNILLDNYFSA--KISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIHCD+KP+NILL + K+ DFG S + R +T I+ +R Y APE A
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTXIQ-SRFYRAPEVILGARY 276
Query: 685 SAKVDVYSFGVMLLEII 701
+D++S G +L E++
Sbjct: 277 GMPIDMWSLGCILAELL 293
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 110/241 (45%), Gaps = 24/241 (9%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQL---- 568
LG G G+V+ V + K +A+KK+ + + E+ I R H N+V++
Sbjct: 19 LGCGGNGLVFSAV-DNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEIL 77
Query: 569 ----------LGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVY 618
+G E + +V E+M LAN++ P + + R+ + ++ RGL Y
Sbjct: 78 GPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQGPLLEEHARLFM-YQLLRGLKY 135
Query: 619 LHEECNVPIIHCDIKPQNILLDNY-FSAKISDFGLSKLLLSDQSRTHTMIRG--TRGYVA 675
+H + ++H D+KP N+ ++ KI DFGL++++ S + G T+ Y +
Sbjct: 136 IH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRS 192
Query: 676 PEWFKNAPVSAK-VDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDV 734
P + K +D+++ G + E++ + E E ++ + + E R ++
Sbjct: 193 PRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQEL 252
Query: 735 L 735
L
Sbjct: 253 L 253
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 50/223 (22%)
Query: 511 EELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNL----- 565
+ LG G+FG V + + A G+ +AVK + + +R ++ S I H N
Sbjct: 20 DTLGEGAFGKVVECIDHKAGGRHVAVK----IVKNVDRYCEAARSEIQVLEHLNTTDPNS 75
Query: 566 ----VQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRI------SLEIARG 615
VQ+L + + + +V+E +G T + K + L R+ + +I +
Sbjct: 76 TFRCVQMLEWFEHHGHICIVFELLGLST-----YDFIKENGFLPFRLDHIRKMAYQICKS 130
Query: 616 LVYLHEECNVPIIHCDIKPQNILL--DNYFSA-----------------KISDFGLSKLL 656
+ +LH + H D+KP+NIL +Y A K+ DFG +
Sbjct: 131 VNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA--- 184
Query: 657 LSDQSRTHTMIRGTRGYVAPEWFKNAPVSAKVDVYSFGVMLLE 699
+ H+ + TR Y APE S DV+S G +L+E
Sbjct: 185 -TYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIE 226
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 98/224 (43%), Gaps = 41/224 (18%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERE--REFKSEVSAIGRTHHKNLVQLLG 570
+G GS+G V + K + +A+KK+ R+ ++ + E++ + R +H ++V++L
Sbjct: 61 IGTGSYGHVCEAYDK-LEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLD 119
Query: 571 FCD----EALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISL-EIARGLVYLHEECNV 625
E + L V + + L F P L ++ L + G+ Y+H +
Sbjct: 120 IVIPKDVEKFDELYVVLEIADSDFKKL-FRTPVYLTELHIKTLLYNLLVGVKYVH---SA 175
Query: 626 PIIHCDIKPQNILLDNYFSAKISDFGLSKLL--------------------LSDQSRTHT 665
I+H D+KP N L++ S K+ DFGL++ + L T
Sbjct: 176 GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKN 235
Query: 666 MIRGTRGYVAPEWFKNAP--------VSAKVDVYSFGVMLLEII 701
+ R G+V W++ AP + +DV+S G + E++
Sbjct: 236 LKRQLTGHVVTRWYR-APELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 67/150 (44%), Gaps = 29/150 (19%)
Query: 627 IIHCDIKPQNILLD-NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVS 685
++H DIK +NIL+D AK+ DFG S LL D+ +T GTR Y PEW
Sbjct: 160 VVHRDIKDENILIDLRRGCAKLIDFG-SGALLHDEP--YTDFDGTRVYSPPEWISRHQYH 216
Query: 686 A-KVDVYSFGVMLLEIICCRRSVEMEVEEEGRAILTDWAYDCYAEGRLDVLVDSDEPAMA 744
A V+S G++L +++C E + E IL AE V D A+
Sbjct: 217 ALPATVWSLGILLYDMVCGDIPFERDQE-----ILE-------AELHFPAHVSPDCCALI 264
Query: 745 DRSRLQKWLMIAMWCIREDPSKRPTMKVVL 774
R C+ PS RP+++ +L
Sbjct: 265 RR------------CLAPKPSSRPSLEEIL 282
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 26/159 (16%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERERE-----FKSEVSAIGRTHHKNLV 566
++G+G+FG V+K + +G+ +A+KK+ E E+E E+ + H+N+V
Sbjct: 25 KIGQGTFGEVFKARHRK-TGQKVALKKV---LMENEKEGFPITALREIKILQLLKHENVV 80
Query: 567 QLLGFC---DEALNR-----LLVYEFMGN---GTLANLIFAIPKPDWNLRVRISLEIARG 615
L+ C NR LV++F + G L+N++ + R+ + G
Sbjct: 81 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK---RVMQMLLNG 137
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 654
L Y+H I+H D+K N+L+ K++DFGL++
Sbjct: 138 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 16/123 (13%)
Query: 593 LIFAIPKPDWNL------RVRISLEIARGLVYLHEEC-----NVPIIHCDIKPQNILLD- 640
LI P+P +L R + E+AR + E N ++H DIK +NIL+D
Sbjct: 133 LILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL 192
Query: 641 NYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPVSAK-VDVYSFGVMLLE 699
N K+ DFG LL + +T GTR Y PEW + + V+S G++L +
Sbjct: 193 NRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 249
Query: 700 IIC 702
++C
Sbjct: 250 MVC 252
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 26/159 (16%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERERE-----FKSEVSAIGRTHHKNLV 566
++G+G+FG V+K + +G+ +A+KK+ E E+E E+ + H+N+V
Sbjct: 24 KIGQGTFGEVFKARHRK-TGQKVALKKV---LMENEKEGFPITALREIKILQLLKHENVV 79
Query: 567 QLLGFC---DEALNR-----LLVYEFMGN---GTLANLIFAIPKPDWNLRVRISLEIARG 615
L+ C NR LV++F + G L+N++ + R+ + G
Sbjct: 80 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK---RVMQMLLNG 136
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 654
L Y+H I+H D+K N+L+ K++DFGL++
Sbjct: 137 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 26/159 (16%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERERE-----FKSEVSAIGRTHHKNLV 566
++G+G+FG V+K + +G+ +A+KK+ E E+E E+ + H+N+V
Sbjct: 25 KIGQGTFGEVFKARHRK-TGQKVALKKV---LMENEKEGFPITALREIKILQLLKHENVV 80
Query: 567 QLLGFC---DEALNR-----LLVYEFMGN---GTLANLIFAIPKPDWNLRVRISLEIARG 615
L+ C NR LV++F + G L+N++ + R+ + G
Sbjct: 81 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK---RVMQMLLNG 137
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 654
L Y+H I+H D+K N+L+ K++DFGL++
Sbjct: 138 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 26/159 (16%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQERERE-----FKSEVSAIGRTHHKNLV 566
++G+G+FG V+K + +G+ +A+KK+ E E+E E+ + H+N+V
Sbjct: 25 KIGQGTFGEVFKARHRK-TGQKVALKKV---LMENEKEGFPITALREIKILQLLKHENVV 80
Query: 567 QLLGFC---DEALNR-----LLVYEFMGN---GTLANLIFAIPKPDWNLRVRISLEIARG 615
L+ C NR LV++F + G L+N++ + R+ + G
Sbjct: 81 NLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIK---RVMQMLLNG 137
Query: 616 LVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSK 654
L Y+H I+H D+K N+L+ K++DFGL++
Sbjct: 138 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 81/180 (45%), Gaps = 24/180 (13%)
Query: 513 LGRGSFGIVYKGVLKSASGKAIAVK---KLDRLAQEREREFKSEVSAIGRTHHKNLVQL- 568
+GRG+F V +K +G+ A+K K D L + F+ E + + + QL
Sbjct: 69 IGRGAFSEVAVVKMKQ-TGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLH 127
Query: 569 LGFCDEALNRL-LVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEEC---- 623
F DE N L LV E+ G L L+ + RI E+AR YL E
Sbjct: 128 FAFQDE--NYLYLVMEYYVGGDLLTLLSKFGE-------RIPAEMAR--FYLAEIVMAID 176
Query: 624 ---NVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFK 680
+ +H DIKP NILLD +++DFG L +D + + GT Y++PE +
Sbjct: 177 SVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQ 236
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 97/195 (49%), Gaps = 17/195 (8%)
Query: 512 ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQER-EREFKSEVSAIGRTHHKNLVQLLG 570
+LGRG + V++ + + + + VK L + + + +RE K + G N++ L
Sbjct: 44 KLGRGKYSEVFEAI-NITNNEKVVVKILKPVKKNKIKREIKILENLRGGP---NIITLAD 99
Query: 571 FCDEALNRL--LVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPII 628
+ ++R LV+E + N L + D+++R + EI + L Y H ++ I+
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLYQTLT--DYDIRFYM-YEILKALDYCH---SMGIM 153
Query: 629 HCDIKPQNILLDN-YFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV-SA 686
H D+KP N+++D+ + ++ D+GL++ Q + + +R + PE + +
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVDYQMYDY 211
Query: 687 KVDVYSFGVMLLEII 701
+D++S G ML +I
Sbjct: 212 SLDMWSLGCMLASMI 226
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 627 IIHCDIKPQNILLDNYFSA--KISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWFKNAPV 684
IIHCD+KP+NILL + K+ DFG S + R + I+ +R Y APE A
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYXXIQ-SRFYRAPEVILGARY 276
Query: 685 SAKVDVYSFGVMLLEII 701
+D++S G +L E++
Sbjct: 277 GMPIDMWSLGCILAELL 293
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,336,826
Number of Sequences: 62578
Number of extensions: 1012870
Number of successful extensions: 4570
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 317
Number of HSP's that attempted gapping in prelim test: 2134
Number of HSP's gapped (non-prelim): 1253
length of query: 799
length of database: 14,973,337
effective HSP length: 107
effective length of query: 692
effective length of database: 8,277,491
effective search space: 5728023772
effective search space used: 5728023772
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)