BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038298
(259 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 127/187 (67%), Gaps = 22/187 (11%)
Query: 90 SRSPLQAQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQERGKK 149
SR+ AQ+H+IAERKRREK+ Q+F+ALSA++PG+K+M+KASVL +KH+K LQER +
Sbjct: 144 SRNQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGE 203
Query: 150 LVEHTKRKAPESVVSVKRSQ--------------------QTLPDIVVRVSDNNVLIRIH 189
L E K + ES+V VK+S+ LP+I VR SD +VLI+I
Sbjct: 204 LEEQKKERRLESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKIL 263
Query: 190 CEKQNIGFISNIVSEIEKLHLVVINSRTIPFGNYALDITVVAQMEVEFCLTVKELVKNLR 249
CEKQ G ++ I++EIEKLH+++ NS + FG LDIT++A+ E +F +T+ ++VK+LR
Sbjct: 264 CEKQK-GHLAKIMAEIEKLHILITNSSVLNFGP-TLDITIIAKKESDFDMTLMDVVKSLR 321
Query: 250 LALSKFI 256
ALS FI
Sbjct: 322 SALSNFI 328
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 158 bits (399), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 127/202 (62%), Gaps = 34/202 (16%)
Query: 86 NRVASRSPLQAQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQE 145
N R P +EHV+AERKRR+K+N++ IALSA++PG+K+ +KA+VLE IKHLK+LQE
Sbjct: 120 NNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQE 179
Query: 146 RGKKLVEH--TKRKAPESVVSVKRSQ-------------------------------QTL 172
R KKL E +K +S++ VKRSQ QT+
Sbjct: 180 RVKKLEEERVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTM 239
Query: 173 PDIVVRVSDNNVLIRIHCEKQNIGFISNIVSEIEKLHLVVINSRTIPFGNYALDITVVAQ 232
P I RVSD ++LIR+HCEK N G + I+S +EK L V+NS T+PFGN L IT++ +
Sbjct: 240 PMIEARVSDRDLLIRVHCEK-NKGCMIKILSSLEKFRLEVVNSFTLPFGNSTLVITILTK 298
Query: 233 MEVEFCLTVKELVKNLRLALSK 254
M+ +F V+E+VKN+R+AL++
Sbjct: 299 MDNKFSRPVEEVVKNIRVALAE 320
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 125/186 (67%), Gaps = 23/186 (12%)
Query: 89 ASRSPLQAQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQERGK 148
+RSP+ A+EHV+AERKRREK++++FIALSA++PG+K+ +K ++L+ I +K+LQE+ +
Sbjct: 110 GTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLR 169
Query: 149 KLVEHTK-RKAPESVVSVKRSQ--------------------QTLPDIVVRVSDNNVLIR 187
L E + + ES++ VK+S+ Q LP+I ++S N++LIR
Sbjct: 170 TLKEEKEATRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEAKISQNDILIR 229
Query: 188 IHCEKQNIGFISNIVSEIEKLHLVVINSRTIPFGNYALDITVVAQMEVEFCLTV-KELVK 246
I CEK G + NI++ IE L + NS +PFG+ LDITV+AQM+ +F +++ K+LV+
Sbjct: 230 ILCEKSK-GCMINILNTIENFQLRIENSIVLPFGDSTLDITVLAQMDKDFSMSILKDLVR 288
Query: 247 NLRLAL 252
NLRLA+
Sbjct: 289 NLRLAM 294
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 138 bits (347), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 116/189 (61%), Gaps = 25/189 (13%)
Query: 90 SRSPLQAQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQERGKK 149
+RS AQ+H++AERKRREK+ Q+F+ALSA+IPG+K+M+KASVL IKH+K LQE K+
Sbjct: 118 TRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKE 177
Query: 150 LVEHTKRKAPESVVSVKRSQ-----------------------QTLPDIVVRVSDNNVLI 186
E K K ESVV VK+S LP+I VRVS +VLI
Sbjct: 178 YEEQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSGKDVLI 237
Query: 187 RIHCEKQNIGFISNIVSEIEKLHLVVINSRTIPFGNYALDITVVAQMEVEFCLTVKELVK 246
+I CEKQ G + I+ EIEKL L + NS +PFG DI+++AQ F + ++++VK
Sbjct: 238 KILCEKQK-GNVIKIMGEIEKLGLSITNSNVLPFG-PTFDISIIAQKNNNFDMKIEDVVK 295
Query: 247 NLRLALSKF 255
NL LSK
Sbjct: 296 NLSFGLSKL 304
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 43/196 (21%)
Query: 99 HVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQER------------ 146
HV++ERKRREK+N+ F+ L +++P I ++NKAS+L TI +LKELQ R
Sbjct: 417 HVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELESSREPAS 476
Query: 147 ---------------------GKKLVEHTKRKAPE-SVVSVKRSQQTLPD-----IVVRV 179
K++ +KRK+PE V+R D + V V
Sbjct: 477 RPSETTTRLITRPSRGNNESVRKEVCAGSKRKSPELGRDDVERPPVLTMDAGTSNVTVTV 536
Query: 180 SDNNVLIRIHCEKQNIGFISNIVSEIEKLHLVVINSR-TIPFGNYALDITVVAQMEVEFC 238
SD +VL+ + C + + ++ + I+ LHL V++ + + P G L I AQ
Sbjct: 537 SDKDVLLEVQCRWEEL-LMTRVFDAIKSLHLDVLSVQASAPDGFMGLKIR--AQFAGSGA 593
Query: 239 LTVKELVKNLRLALSK 254
+ + + LR A+ K
Sbjct: 594 VVPWMISEALRKAIGK 609
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 41/169 (24%)
Query: 99 HVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQER------------ 146
HV++ERKRREK+N+ F+ L +++P I ++NKAS+L TI +LKELQ R
Sbjct: 419 HVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELESSREPAS 478
Query: 147 ---------------------GKKLVEHTKRKAPE-SVVSVKRSQQTLPD-----IVVRV 179
K++ +KRK+PE V+R D + V V
Sbjct: 479 RPSETTTRLITRPSRGNNESVRKEVCAGSKRKSPELGRDDVERPPVLTMDAGSSNVTVTV 538
Query: 180 SDNNVLIRIHCEKQNIGFISNIVSEIEKLHLVVINSR-TIPFGNYALDI 227
SD +VL+ + C + + ++ + I+ LHL V++ + + P G L I
Sbjct: 539 SDKDVLLEVQCRWEEL-LMTRVFDAIKSLHLDVLSVQASAPDGFMGLKI 586
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 5/136 (3%)
Query: 80 NKPGQGNRVASRSPLQAQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKH 139
N+P + R + +A HV AER+RREK+NQ+F AL +V+P I +M+KAS+L + +
Sbjct: 415 NRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSY 474
Query: 140 LKELQERGKKLVEHTKRKAPESVVSVKRSQQTLPDIVVRVSDNNVLIRIHCEKQNIGFIS 199
+ EL + K + +R S + DI V+ S +V +RI+C ++ S
Sbjct: 475 INELHAKLKVMEAERERLGYSSNPPISLDS----DINVQTSGEDVTVRINCPLESHP-AS 529
Query: 200 NIVSEIEKLHLVVINS 215
I E+ + VINS
Sbjct: 530 RIFHAFEESKVEVINS 545
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 73/118 (61%), Gaps = 3/118 (2%)
Query: 91 RSPLQAQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQERGKKL 150
R P + HV+AER+RREK+N++FI L +++P + +M+K S+L TI ++ L++R +L
Sbjct: 356 RLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHEL 415
Query: 151 VEHTKRKAPESVVSVKRSQQTLPDIVVRVSDNNVLIRIHCEKQNIGFISNIVSEIEKL 208
+ + + KR +T ++ V + +N+VL+ + CE ++ G + +I+ + +L
Sbjct: 416 ENTHHEQQHKRTRTCKR--KTSEEVEVSIIENDVLLEMRCEYRD-GLLLDILQVLHEL 470
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 12/110 (10%)
Query: 87 RVASRSPLQAQE----HVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKE 142
R R P +E HV AER+RREK+NQ+F AL +V+P I +M+KAS+L I ++KE
Sbjct: 380 RKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKE 439
Query: 143 LQERGKKLVEH---TKRKAPES-VVSVKRSQQTLPDIVVRVSDNNVLIRI 188
LQE+ K + + T + ES ++V+ S P++ ++ + V++R+
Sbjct: 440 LQEKVKIMEDERVGTDKSLSESNTITVEES----PEVDIQAMNEEVVVRV 485
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 78/144 (54%), Gaps = 22/144 (15%)
Query: 73 AMKTRIVNKPGQGNRVASRSPLQAQE----HVIAERKRREKMNQQFIALSAVIPGIKQMN 128
A R+V +P + R R P +E HV AER+RREK+NQ+F +L AV+P + +M+
Sbjct: 387 AESNRVVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMD 446
Query: 129 KASVLEGTIKHLKEL----------QERGKKLVEHTKRKAPESVVSVKR----SQQTLP- 173
KAS+L I ++ EL +E +K ++ ++A + SVK +Q++
Sbjct: 447 KASLLGDAISYISELKSKLQKAESDKEELQKQIDVMNKEAGNAKSSVKDRKCLNQESSVL 506
Query: 174 ---DIVVRVSDNNVLIRIHCEKQN 194
++ V++ + +IRI C K+N
Sbjct: 507 IEMEVDVKIIGWDAMIRIQCSKRN 530
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 91/173 (52%), Gaps = 21/173 (12%)
Query: 25 GSMPFSGLISF-----QDTD-SLASYYSQMSNPNSEYYCTIKSEDKRASDENLMAMKTRI 78
G+ P S I+F DT SL SY Q +++ Y ++ DE L +
Sbjct: 249 GAKPRSMSINFSPKTEDDTGFSLESYEVQAIGGSNQVYGY-----EQGKDETLYLTDEQ- 302
Query: 79 VNKPGQGNRVASRSPLQAQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIK 138
KP + R + +A HV AER+RREK+NQ+F AL AV+P I +M+KAS+L I
Sbjct: 303 --KPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAIT 360
Query: 139 HLKELQERGKKLVEHTKRKAPESVVSVKRSQQTLP-DIVVRVSDNNVLIRIHC 190
++ ++Q++ + V T+++ ++ + S Q P ++ + ++ ++R+ C
Sbjct: 361 YITDMQKKIR--VYETEKQ----IMKRRESNQITPAEVDYQQRHDDAVVRLSC 407
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 92 SPLQAQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQERGKKLV 151
+P + H ++E+KRREK+N++F+ L ++IP I +++K S+L+ TI++L++LQ+R ++L
Sbjct: 399 TPEETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQEL- 457
Query: 152 EHTKRKAPESVVSVKRSQQTLPD 174
+ R++ ++ + ++ PD
Sbjct: 458 -ESCRESADTETRITMMKRKKPD 479
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 30/145 (20%)
Query: 78 IVNKPGQGNRVASRSPLQAQE----HVIAERKRREKMNQQFIALSAVIPGIKQMNKASVL 133
+V P + R R P +E HV AER+RREK+NQ+F +L AV+P + +M+KAS+L
Sbjct: 391 VVEPPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLL 450
Query: 134 EGTIKHLKELQER------------------------GKKLVEHTKRKAPESVVSVKRSQ 169
I ++ EL+ + GK K + + S S
Sbjct: 451 GDAISYINELKSKLQQAESDKEEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSI 510
Query: 170 QTLPDIVVRVSDNNVLIRIHCEKQN 194
+ +I V++ +V+IR+ C K++
Sbjct: 511 EM--EIDVKIIGWDVMIRVQCGKKD 533
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 23/128 (17%)
Query: 90 SRSPLQAQE----HVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQE 145
R P +E HV AER+RREK+NQ+F AL AV+P + +M+KAS+L I ++ EL+
Sbjct: 440 GRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKS 499
Query: 146 R-----GKKL----------VEHTKRKAPESVVSVKRSQQTLP----DIVVRVSDNNVLI 186
+ +KL +E RKA S + S ++ +I V++ + +I
Sbjct: 500 KVVKTESEKLQIKNQLEEVKLELAGRKASASGGDMSSSCSSIKPVGMEIEVKIIGWDAMI 559
Query: 187 RIHCEKQN 194
R+ K+N
Sbjct: 560 RVESSKRN 567
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 41/52 (78%)
Query: 99 HVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQERGKKL 150
H + E+KRREK+N++F+ L +IP I +++K S+L+ TI++L+EL+ R ++L
Sbjct: 442 HAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQEL 493
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
Query: 89 ASRSPLQAQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQERGK 148
A+ SP A +++++ER RR+K+NQ+ AL +V+P I +M+KAS+++ I +++ LQ K
Sbjct: 48 AASSP--ASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEK 105
Query: 149 KL 150
KL
Sbjct: 106 KL 107
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 89 ASRSPLQAQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQERGK 148
A+ SP ++ +V++ER RR+K+NQ+ AL +V+P I +++KASV++ +I +++EL ++ K
Sbjct: 46 AATSPASSK-NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEK 104
Query: 149 KL 150
L
Sbjct: 105 TL 106
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 22/166 (13%)
Query: 99 HVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQERGK--KLVEHT-- 154
HV AER RREK+N +F AL AV+P + +M+K S+LE + ++ EL+ + + +L +H
Sbjct: 344 HVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELEKHAIE 403
Query: 155 -----------KRKAPESVVSVKRSQQTLPDIVVRVSD-NNVLIRIHCEKQN------IG 196
+R A SV + + I V++ + ++ ++R+ K + +
Sbjct: 404 IQFNELKEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESDDAMVRVESRKDHHPGARLMN 463
Query: 197 FISNIVSEIEKLHLVVINSRTIPFGNYALDITVVAQMEVEFCLTVK 242
+ ++ E+ + V+N I N + + + Q E+ L K
Sbjct: 464 ALMDLELEVNHASISVMNDLMIQQANVKMGLRIYKQEELRDLLMSK 509
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 25/161 (15%)
Query: 98 EHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQERGKKLVEHTKRK 157
++++AER+RR+K+N + L +V+P I +M++AS+L I +LKEL +R L +
Sbjct: 267 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELEST 326
Query: 158 AP--ESVVSVKRSQQTL---------------------PDIVVRVSDNNVL-IRIHCEKQ 193
P S+ + + QTL P + VR+ + + I + C ++
Sbjct: 327 PPSSSSLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKAVNIHMFCGRR 386
Query: 194 NIGFISNIVSEIEKLHLVVINSRTIPFGNYALDITVVAQME 234
G + + + ++ L L V + F +ALD+ Q +
Sbjct: 387 -PGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCQ 426
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 98 EHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQERGKKLVEHTKRK 157
++++AER+RR+K+N + L +V+P I +M++AS+L I +LKEL +R L +
Sbjct: 307 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELEST 366
Query: 158 APESVVSVKRSQQTL 172
P S+ S L
Sbjct: 367 PPGSLPPTSSSFHPL 381
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 36/48 (75%)
Query: 99 HVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQER 146
HV AE++RREK+N +F AL A++P + +M+KAS+L + +++ L+ +
Sbjct: 250 HVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSK 297
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 39/52 (75%)
Query: 99 HVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQERGKKL 150
+++AER+RR+K+N + AL +++P I ++++AS+L I ++KELQ K+L
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKEL 366
>sp|Q700E4|BH067_ARATH Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2
SV=1
Length = 358
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 21/136 (15%)
Query: 99 HVIAERKRREKMNQQFIALSAVIPG--IKQMNKASVLEGTIKHLKEL------------- 143
H+ ER RR +MN+ +L A++P I++ ++AS++ G I ++K L
Sbjct: 180 HIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQKRT 239
Query: 144 -QERGKKLVE----HTKRKAPESVVSVKRSQQTLPDIVVRVSDNNVLIRIHCEKQNIGFI 198
Q+ ++VE H + + + Q +P I V N+V +++ CEK+ +
Sbjct: 240 QQQSNSEVVENALNHLSGISSNDLWTTLEDQTCIPKIEATVIQNHVSLKVQCEKKQGQLL 299
Query: 199 SNIVSEIEKLHLVVIN 214
I+S +EKL L V++
Sbjct: 300 KGIIS-LEKLKLTVLH 314
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 37/51 (72%)
Query: 100 VIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQERGKKL 150
+I+ER+RR +M + AL +++P I +M+KAS++ + +++ELQ + KKL
Sbjct: 133 LISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKL 183
>sp|Q9LTS4|BH041_ARATH Putative transcription factor bHLH041 OS=Arabidopsis thaliana
GN=BHLH41 PE=4 SV=1
Length = 466
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 98 EHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQERGKKLVEHTK 155
+H+I+ERKRREK+N+ F AL +++P + +KASVL + L LQ KL+E +
Sbjct: 289 QHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLLERNR 346
>sp|Q9XEF0|BH051_ARATH Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2
SV=1
Length = 254
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Query: 96 AQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQERGKK--LVEH 153
++ H +AE++RR+++N AL ++P +++KA++L I+ +KEL+++ + + +
Sbjct: 64 SRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAESPIFQD 123
Query: 154 TKRKAPESVVSVKRSQQTLPDIVVRVSDNNVLI---RIHCEKQNIGFISNIVSEIEKLHL 210
+A E V +T+ D S+ N +I CE Q IS I+ + KL L
Sbjct: 124 LPTEADEVTV----QPETISDF---ESNTNTIIFKASFCCEDQPEA-ISEIIRVLTKLQL 175
Query: 211 VVINSRTIPFG 221
I + I G
Sbjct: 176 ETIQAEIISVG 186
>sp|O81900|DYT1_ARATH Transcription factor DYSFUNCTIONAL TAPETUM 1 OS=Arabidopsis
thaliana GN=DYT1 PE=2 SV=1
Length = 207
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 102 AERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQERGKKLVE--HTKRKAP 159
AER+RREK++ + +AL + +P + M KAS++E I ++ ELQ K L+E H +AP
Sbjct: 36 AERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLETFHEMEEAP 95
Query: 160 ESVVSVKRSQQTLPDI--VVRVSDNN 183
+ +QT P I V SD N
Sbjct: 96 PEI----DEEQTDPMIKPEVETSDLN 117
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%)
Query: 94 LQAQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQ 144
+ AQ H ++E+KRR K+N++ AL +IP + +KAS+L+ I++LK+LQ
Sbjct: 93 IDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQ 143
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 40/57 (70%)
Query: 88 VASRSPLQAQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQ 144
+ S+ A+ H ++ER+RR+++N++ AL +IP +++KAS+L+ I++LK LQ
Sbjct: 337 LGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQ 393
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
Query: 96 AQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQERGKKLVE 152
A++H AER+RR ++N QF L ++P + + +KASVL T+++ EL KK+V+
Sbjct: 93 AKKHSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNEL----KKMVQ 145
>sp|Q9M1K1|ORG2_ARATH Transcription factor ORG2 OS=Arabidopsis thaliana GN=ORG2 PE=1 SV=1
Length = 253
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 24/135 (17%)
Query: 99 HVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEG---TIKHLKELQERGKKLV---- 151
H +ER RR+K+N F +L + +P Q K S+ E ++K++ ELQ++ K+L+
Sbjct: 76 HNASERDRRKKINTLFSSLRSCLPASDQSKKLSIPETVSKSLKYIPELQQQVKRLIQKKE 135
Query: 152 ------------EHTKRKAPESVVSVKRSQQTLPDIVVRVSDNNVLIRIHCEKQNIGFIS 199
E ++ P++V S + R+ DN V++++ K + IS
Sbjct: 136 EILVRVSGQRDFELYDKQQPKAVASYLSTVS-----ATRLGDNEVMVQVSSSKIHNFSIS 190
Query: 200 NIVSEIEKLHLVVIN 214
N++ IE+ V+++
Sbjct: 191 NVLGGIEEDGFVLVD 205
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 81 KPGQGNRVASRSPLQAQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHL 140
K G + V+++ A H +ERKRR+K+NQ+ L ++P + +KAS+L+ I++L
Sbjct: 200 KAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYL 259
Query: 141 KELQ 144
K+LQ
Sbjct: 260 KQLQ 263
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 36/49 (73%)
Query: 96 AQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQ 144
A+ H ++ERKRR+++N++ AL +IP + +KAS+L+ I+++K LQ
Sbjct: 286 AEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQ 334
>sp|Q9M1K0|ORG3_ARATH Transcription factor ORG3 OS=Arabidopsis thaliana GN=ORG3 PE=1 SV=1
Length = 258
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 24/135 (17%)
Query: 99 HVIAERKRREKMNQQFIALSAVIPGIKQMNKASV---LEGTIKHLKELQER--------- 146
H +ER RR K+N F +L + +P Q K S+ + ++K++ ELQE+
Sbjct: 81 HNASERDRRRKINSLFSSLRSCLPASGQSKKLSIPATVSRSLKYIPELQEQVKKLIKKKE 140
Query: 147 -------GKKLVEHTKRKAPESVVSVKRSQQTLPDIVVRVSDNNVLIRIHCEKQNIGFIS 199
G++ E ++ P++V + + R+ DN V+++I K + IS
Sbjct: 141 ELLVQISGQRNTECYVKQPPKAVANYISTVSA-----TRLGDNEVMVQISSSKIHNFSIS 195
Query: 200 NIVSEIEKLHLVVIN 214
N++S +E+ V+++
Sbjct: 196 NVLSGLEEDRFVLVD 210
>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis thaliana GN=BHLH127
PE=2 SV=1
Length = 307
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 83 GQGNRVASRSPLQAQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKE 142
G +R SR+ A+ H +AER+RREK+N++ L +IP + K S+LE I+++K
Sbjct: 142 GSTSRKRSRA---AEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKS 198
Query: 143 LQERGKKLVEH 153
L+ + + + H
Sbjct: 199 LEMQINQFMPH 209
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 33 ISFQDTDSLASYYSQMSNPNSEYYCTIKSEDKRASDENLMAMKTRIVNKPGQGNRVASRS 92
ISFQ + L S P++E +K RA+ + IV KP + N S
Sbjct: 223 ISFQHSTCL----SDNVEPDAEAIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTD 278
Query: 93 PLQAQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQERGKKLVE 152
P +A R+RRE+++++ L ++PG +M+ AS+L+ +LK L+ + K L E
Sbjct: 279 P-----QTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL-E 332
Query: 153 HTKRKAPESVVSVKRSQQTLP 173
+ + K ++ +S + + P
Sbjct: 333 NLRPKLDQTNLSFSSAPTSFP 353
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 37/49 (75%)
Query: 96 AQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQ 144
A+ H ++E++RR ++N++ AL ++IP + +KAS+L+ I++LK+LQ
Sbjct: 199 AEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQ 247
>sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis thaliana GN=BHLH61 PE=2
SV=1
Length = 315
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 81/163 (49%), Gaps = 5/163 (3%)
Query: 83 GQGNRVASRSPLQAQ--EHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHL 140
G+ N+ S L+ Q ++++AER+RR+++N + L +++P I +M++ S+L I ++
Sbjct: 134 GETNKKRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYM 193
Query: 141 KELQERGKKLVEHTKRKAPESVVSVKRSQQTLPDIVVRVSDNNVLIRIH---CEKQNIGF 197
KEL ++ KL E + S +S + +++ ++ + + H C G
Sbjct: 194 KELLDKINKLQEDEQELGSNSHLSTLITNESMVRNSLKFEVDQREVNTHIDICCPTKPGL 253
Query: 198 ISNIVSEIEKLHLVVINSRTIPFGNYALDITVVAQMEVEFCLT 240
+ + VS +E L L + F +++L + E + +T
Sbjct: 254 VVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQRYMVT 296
>sp|Q0WNR2|BH090_ARATH Transcription factor bHLH90 OS=Arabidopsis thaliana GN=BHLH90 PE=2
SV=1
Length = 441
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 102 AERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQERGKKLVEHTK 155
+ERKRRE++NQ L AV+P I ++NK + + ++ EL +KL + K
Sbjct: 268 SERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELK 321
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 83 GQGNRVASRSPLQAQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKE 142
G +R SR+ A+ H +AER+RREK+N++ L +IP + K S L+ I+++K
Sbjct: 247 GSTSRKRSRT---AEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKS 303
Query: 143 LQ 144
LQ
Sbjct: 304 LQ 305
>sp|Q9FIX5|BH092_ARATH Transcription factor bHLH92 OS=Arabidopsis thaliana GN=BHLH92 PE=2
SV=1
Length = 247
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 95 QAQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQERGKKLVEHT 154
+++ H++ ER RREK Q ++AL +++P + +K S++E + + +LQ K+LV
Sbjct: 86 RSRRHMLKERTRREKQKQSYLALHSLLPFATKNDKNSIVEKAVDEIAKLQRLKKELVRRI 145
Query: 155 K 155
K
Sbjct: 146 K 146
>sp|Q8L467|BH104_ARATH Transcription factor bHLH104 OS=Arabidopsis thaliana GN=BHLH104
PE=2 SV=1
Length = 283
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 103 ERKRREKMNQQFIALSAVI-PG-IKQMNKASVLEGTIKHLKELQERGKKLVEHTKRKAPE 160
ER RREK+N++F+ LS+V+ PG + +K ++L+ I+ L +L++ KL E T +K E
Sbjct: 139 ERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKL-EETNQKLLE 197
Query: 161 SVVSVKRSQQTL 172
+ S+K + L
Sbjct: 198 EIKSLKAEKNEL 209
>sp|Q700C7|SPCH_ARATH Transcription factor SPEECHLESS OS=Arabidopsis thaliana GN=SPCH
PE=1 SV=1
Length = 364
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 95 QAQEHVIAERKRREKMNQQFIALSAVIPG--IKQMNKASVLEGTIKHLKELQERGKKLVE 152
Q HV ER RR++MN+ L +++P +K+ ++AS++ G ++++ ELQ+ + L
Sbjct: 100 QKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEA 159
Query: 153 HTKRK 157
+RK
Sbjct: 160 KKQRK 164
>sp|Q9FKQ6|BH099_ARATH Transcription factor bHLH99 OS=Arabidopsis thaliana GN=BHLH99 PE=2
SV=1
Length = 296
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 95 QAQEHVIAERKRREKMNQQFIALSAVIP-GIKQMN-KASVLEGTIKHLKELQERGKKL 150
Q H+ ER RR++MN L +++P Q N +AS++EGTI +LK+L++R + L
Sbjct: 100 QRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLKKLEQRLQSL 157
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 99 HVIAERKRREKMNQQFIALSAVIPGIKQMNKASVLEGTIKHLKELQ 144
H + ERKRR++ N++ AL ++P + +KAS+L+ IK+++ LQ
Sbjct: 234 HKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQ 279
>sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2
SV=1
Length = 281
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 88 VASRSPLQAQEHVIAERKRREKMNQQFIALSAVIPGI-KQMNKASVLEGTIKHLKELQ 144
V +R H +AER RREK++++ AL +IPG K + KA VL+ I +++ LQ
Sbjct: 153 VRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQ 210
>sp|Q9M8K6|MUTE_ARATH Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1
Length = 202
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 99 HVIAERKRREKMNQQFIALSAVIPG--IKQMNKASVLEGTIKHLKELQERGKKLVEHTKR 156
H+ ER RR +MN+ +L ++ P IK+ ++AS++ G I+ +KELQ+ + L +R
Sbjct: 3 HIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKKRR 62
Query: 157 KA 158
K
Sbjct: 63 KT 64
>sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1
Length = 414
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 59 IKSEDKRASDENLMAMKTRIVNKPGQGNRVASRSPLQAQEHVIAERKRREKMNQQFIALS 118
I E++ ++N+ + + K + ++ + Q H+ ER RR++MN+ L
Sbjct: 159 IGGEEEDRENKNVTKKEVKSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLR 218
Query: 119 AVIPG--IKQMNKASVLEGTIKHLKELQERGKKLVEHTKRK 157
+++PG +++ ++AS++ G I+ ++EL++ + L +R+
Sbjct: 219 SLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRR 259
>sp|Q9ZVB5|BH100_ARATH Transcription factor bHLH100 OS=Arabidopsis thaliana GN=BHLH100
PE=2 SV=1
Length = 242
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 76/161 (47%), Gaps = 28/161 (17%)
Query: 80 NKPGQGNRVASRSP--LQAQEHVIAERKRREKMNQQFIALSAVIPGIKQMNKASV---LE 134
N + NR +P ++ H +ER+RR+K+N F +L + +P Q K SV +
Sbjct: 45 NVSSENNRTLLDNPVVMKKLNHNASERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVS 104
Query: 135 GTIKHLKELQER----------------GKKLVEHTKR--KAPESVVSVKRSQQTLPDIV 176
+K++ ELQE+ G++ + +T + K+ E V S + +
Sbjct: 105 QALKYIPELQEQVKKLMKKKEELSFQISGQRDLVYTDQNSKSEEGVTSYASTVSS----- 159
Query: 177 VRVSDNNVLIRIHCEKQNIGFISNIVSEIEKLHLVVINSRT 217
R+S+ V+++I + N++S +E+ LV++ + +
Sbjct: 160 TRLSETEVMVQISSLQTEKCSFGNVLSGVEEDGLVLVGASS 200
>sp|Q8QGQ7|BMAL2_CHICK Aryl hydrocarbon receptor nuclear translocator-like protein 2
OS=Gallus gallus GN=ARNTL2 PE=1 SV=1
Length = 622
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
Query: 97 QEHVIAERKRREKMNQQFIALSAVIPGI----KQMNKASVLEGTIKHLKELQERGKKLVE 152
+ H E++RR+KMN LSA+IP ++++K +VL ++HLK L+ E
Sbjct: 95 EAHSQTEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVLRMAVQHLKSLKGSTSSYTE 154
Query: 153 HTKRKAPESVVSVKRSQQTLPDIVVRVSDNNVLIRIHCEKQNIGFISNIVSEI 205
R P + L +++R +D + + + C + I F+S V +I
Sbjct: 155 --VRYKPSFL-----KDDELRQLILRAADGFLFV-VGCNRGKILFVSESVCKI 199
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,774,694
Number of Sequences: 539616
Number of extensions: 3110623
Number of successful extensions: 11697
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 222
Number of HSP's that attempted gapping in prelim test: 11551
Number of HSP's gapped (non-prelim): 325
length of query: 259
length of database: 191,569,459
effective HSP length: 115
effective length of query: 144
effective length of database: 129,513,619
effective search space: 18649961136
effective search space used: 18649961136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)