Query 038300
Match_columns 401
No_of_seqs 198 out of 1762
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 09:36:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038300.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038300hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02670 transferase, transfer 100.0 6.9E-60 1.5E-64 452.5 40.4 397 1-399 32-466 (472)
2 PLN02764 glycosyltransferase f 100.0 1.5E-58 3.3E-63 439.7 40.2 393 1-400 31-447 (453)
3 PLN00414 glycosyltransferase f 100.0 1.9E-58 4.1E-63 441.9 39.8 389 1-400 30-442 (446)
4 PLN02208 glycosyltransferase f 100.0 3.2E-58 6.8E-63 439.9 38.3 389 1-400 30-441 (442)
5 PLN02863 UDP-glucoronosyl/UDP- 100.0 3E-57 6.5E-62 437.2 40.5 395 1-399 35-472 (477)
6 PLN02992 coniferyl-alcohol glu 100.0 2.5E-56 5.4E-61 428.3 39.5 386 1-399 32-470 (481)
7 PLN02534 UDP-glycosyltransfera 100.0 3.2E-56 7E-61 429.2 39.0 394 1-398 34-486 (491)
8 PLN02410 UDP-glucoronosyl/UDP- 100.0 3.4E-55 7.4E-60 420.0 39.6 378 1-398 33-450 (451)
9 PLN02173 UDP-glucosyl transfer 100.0 6.7E-55 1.4E-59 416.2 38.2 374 1-397 31-447 (449)
10 PLN03015 UDP-glucosyl transfer 100.0 4.5E-54 9.7E-59 410.4 38.1 383 2-396 31-466 (470)
11 PLN02555 limonoid glucosyltran 100.0 7.5E-54 1.6E-58 412.2 37.8 386 1-398 33-469 (480)
12 PLN02210 UDP-glucosyl transfer 100.0 1.5E-53 3.3E-58 410.2 39.0 376 1-397 36-454 (456)
13 PLN03007 UDP-glucosyltransfera 100.0 1.2E-53 2.5E-58 415.7 38.0 393 1-399 31-481 (482)
14 PLN03004 UDP-glycosyltransfera 100.0 2.2E-53 4.8E-58 405.9 36.5 368 4-383 36-440 (451)
15 PLN02152 indole-3-acetate beta 100.0 6.3E-53 1.4E-57 403.3 38.2 380 2-396 31-454 (455)
16 PLN00164 glucosyltransferase; 100.0 2.1E-52 4.5E-57 404.9 39.6 382 4-398 36-473 (480)
17 PLN02562 UDP-glycosyltransfera 100.0 3.4E-52 7.4E-57 400.5 38.1 369 1-396 32-447 (448)
18 PLN02207 UDP-glycosyltransfera 100.0 9.8E-52 2.1E-56 395.9 39.4 380 2-398 30-465 (468)
19 PLN02448 UDP-glycosyltransfera 100.0 7.2E-51 1.6E-55 394.1 37.5 372 3-398 40-457 (459)
20 PLN02554 UDP-glycosyltransfera 100.0 2.5E-50 5.4E-55 391.8 37.6 382 2-400 29-480 (481)
21 PLN02167 UDP-glycosyltransfera 100.0 1.2E-49 2.5E-54 386.5 38.3 383 2-398 30-472 (475)
22 PHA03392 egt ecdysteroid UDP-g 100.0 8.1E-42 1.8E-46 333.2 24.4 303 67-397 123-465 (507)
23 PF00201 UDPGT: UDP-glucoronos 100.0 1.5E-42 3.2E-47 343.5 0.4 293 72-396 113-441 (500)
24 TIGR01426 MGT glycosyltransfer 100.0 6.4E-35 1.4E-39 280.2 27.8 344 1-396 21-389 (392)
25 cd03784 GT1_Gtf_like This fami 100.0 1.3E-33 2.8E-38 272.2 17.8 343 1-395 26-400 (401)
26 KOG1192 UDP-glucuronosyl and U 100.0 1.5E-32 3.3E-37 272.0 19.1 281 78-385 114-440 (496)
27 COG1819 Glycosyl transferases, 100.0 1.3E-30 2.8E-35 248.0 19.9 355 1-397 27-399 (406)
28 PF13528 Glyco_trans_1_3: Glyc 99.8 1E-17 2.2E-22 156.4 18.9 227 66-361 82-317 (318)
29 PRK12446 undecaprenyldiphospho 99.8 4.7E-16 1E-20 146.3 26.5 281 2-376 28-335 (352)
30 COG0707 MurG UDP-N-acetylgluco 99.7 1.1E-15 2.3E-20 142.4 25.8 146 232-399 202-354 (357)
31 TIGR00661 MJ1255 conserved hyp 99.7 2.5E-16 5.4E-21 147.0 18.2 80 276-363 230-313 (321)
32 PRK00726 murG undecaprenyldiph 99.6 5.4E-13 1.2E-17 126.7 26.8 96 277-380 237-337 (357)
33 cd03785 GT1_MurG MurG is an N- 99.5 4.9E-12 1.1E-16 119.7 25.5 90 275-372 235-329 (350)
34 PF04101 Glyco_tran_28_C: Glyc 99.4 1.8E-13 3.8E-18 115.3 4.1 84 275-363 55-143 (167)
35 TIGR01133 murG undecaprenyldip 99.3 4.6E-10 1E-14 106.1 24.2 89 284-383 243-334 (348)
36 PLN02605 monogalactosyldiacylg 99.3 6.1E-10 1.3E-14 106.6 23.0 111 275-399 265-378 (382)
37 COG4671 Predicted glycosyl tra 99.3 5.4E-10 1.2E-14 100.0 18.8 305 2-363 40-364 (400)
38 PRK13608 diacylglycerol glucos 99.3 5.6E-10 1.2E-14 107.2 20.2 80 275-363 256-337 (391)
39 PRK13609 diacylglycerol glucos 99.2 3.7E-09 8E-14 101.3 21.1 122 232-373 218-344 (380)
40 TIGR03590 PseG pseudaminic aci 99.1 5.1E-09 1.1E-13 95.5 16.2 88 233-331 187-278 (279)
41 TIGR00215 lpxB lipid-A-disacch 98.9 4.8E-08 1E-12 93.4 17.2 101 286-392 262-381 (385)
42 cd03814 GT1_like_2 This family 98.8 7.4E-06 1.6E-10 77.2 28.9 87 274-374 246-339 (364)
43 PRK00025 lpxB lipid-A-disaccha 98.8 3E-07 6.5E-12 88.1 19.3 78 286-372 256-346 (380)
44 TIGR03492 conserved hypothetic 98.7 2.4E-07 5.3E-12 88.7 14.3 87 277-375 281-372 (396)
45 PLN02871 UDP-sulfoquinovose:DA 98.7 4.9E-05 1.1E-09 74.9 30.8 118 225-363 270-399 (465)
46 cd03800 GT1_Sucrose_synthase T 98.6 9.9E-05 2.2E-09 70.8 28.2 79 274-363 282-367 (398)
47 PRK05749 3-deoxy-D-manno-octul 98.6 5.2E-05 1.1E-09 73.8 26.4 75 287-373 315-394 (425)
48 cd03823 GT1_ExpE7_like This fa 98.5 9.1E-05 2E-09 69.6 24.8 79 274-363 242-328 (359)
49 PRK10307 putative glycosyl tra 98.4 0.00077 1.7E-08 65.3 30.2 80 275-363 284-372 (412)
50 cd03794 GT1_wbuB_like This fam 98.4 0.00025 5.3E-09 67.2 26.3 80 273-363 273-364 (394)
51 cd03818 GT1_ExpC_like This fam 98.4 0.00063 1.4E-08 65.6 28.4 81 274-363 280-365 (396)
52 COG1519 KdtA 3-deoxy-D-manno-o 98.4 0.00036 7.9E-09 65.2 24.2 112 276-398 301-417 (419)
53 cd03817 GT1_UGDG_like This fam 98.4 0.00044 9.4E-09 65.2 25.9 78 274-363 258-342 (374)
54 cd04962 GT1_like_5 This family 98.3 0.00052 1.1E-08 65.2 26.0 78 275-363 253-335 (371)
55 cd03820 GT1_amsD_like This fam 98.3 0.00044 9.6E-09 64.2 24.2 89 275-377 235-329 (348)
56 TIGR03449 mycothiol_MshA UDP-N 98.3 0.0019 4.2E-08 62.3 28.5 78 275-363 283-367 (405)
57 cd03808 GT1_cap1E_like This fa 98.3 0.0026 5.7E-08 59.3 28.6 79 274-363 245-328 (359)
58 cd03798 GT1_wlbH_like This fam 98.3 0.0018 3.8E-08 60.8 27.2 80 274-364 258-344 (377)
59 cd03801 GT1_YqgM_like This fam 98.3 0.0016 3.5E-08 60.9 26.8 80 273-363 254-340 (374)
60 cd03819 GT1_WavL_like This fam 98.2 0.0033 7.2E-08 59.2 28.3 80 275-363 246-329 (355)
61 KOG3349 Predicted glycosyltran 98.2 1.2E-05 2.5E-10 63.5 8.6 98 235-341 27-132 (170)
62 PF04007 DUF354: Protein of un 98.1 0.0013 2.9E-08 61.1 23.0 276 1-362 25-308 (335)
63 cd03816 GT1_ALG1_like This fam 98.1 0.0098 2.1E-07 57.7 28.9 76 276-364 295-381 (415)
64 TIGR02472 sucr_P_syn_N sucrose 98.1 0.009 1.9E-07 58.4 28.1 78 275-363 317-405 (439)
65 PF02350 Epimerase_2: UDP-N-ac 98.0 8.7E-05 1.9E-09 69.8 12.8 112 230-363 200-317 (346)
66 cd05844 GT1_like_7 Glycosyltra 98.0 0.0016 3.6E-08 61.6 21.6 79 274-363 244-335 (367)
67 PF03033 Glyco_transf_28: Glyc 97.9 6.8E-06 1.5E-10 66.6 2.4 96 1-111 24-133 (139)
68 TIGR03568 NeuC_NnaA UDP-N-acet 97.9 0.00074 1.6E-08 64.2 16.2 115 229-363 219-338 (365)
69 cd03796 GT1_PIG-A_like This fa 97.8 0.038 8.2E-07 53.3 27.7 77 275-364 250-333 (398)
70 cd03822 GT1_ecORF704_like This 97.8 0.032 6.9E-07 52.4 26.4 78 274-363 246-333 (366)
71 cd04955 GT1_like_6 This family 97.7 0.02 4.4E-07 53.9 23.4 75 274-363 247-329 (363)
72 cd03806 GT1_ALG11_like This fa 97.7 0.016 3.5E-07 56.3 22.7 77 275-364 305-392 (419)
73 cd03804 GT1_wbaZ_like This fam 97.7 0.0022 4.9E-08 60.5 16.2 115 230-364 208-326 (351)
74 PRK01021 lpxB lipid-A-disaccha 97.7 0.026 5.7E-07 56.1 23.6 92 286-381 483-589 (608)
75 TIGR00236 wecB UDP-N-acetylglu 97.7 0.00058 1.3E-08 65.0 12.0 105 275-398 255-363 (365)
76 TIGR02468 sucrsPsyn_pln sucros 97.6 0.11 2.4E-06 55.3 28.6 110 275-396 548-668 (1050)
77 COG3980 spsG Spore coat polysa 97.6 0.00077 1.7E-08 59.4 10.5 131 231-379 173-305 (318)
78 PRK15484 lipopolysaccharide 1, 97.6 0.0012 2.5E-08 63.3 12.7 113 275-400 257-379 (380)
79 PRK14089 ipid-A-disaccharide s 97.6 8.4E-05 1.8E-09 69.5 4.5 102 286-395 230-346 (347)
80 PRK15179 Vi polysaccharide bio 97.4 0.15 3.3E-06 52.5 26.3 95 274-377 573-673 (694)
81 cd03786 GT1_UDP-GlcNAc_2-Epime 97.4 0.0012 2.6E-08 62.7 10.2 101 275-396 258-362 (363)
82 PF02684 LpxB: Lipid-A-disacch 97.4 0.036 7.8E-07 52.4 19.7 93 285-383 254-356 (373)
83 PRK15427 colanic acid biosynth 97.3 0.011 2.3E-07 57.2 15.9 79 274-363 278-369 (406)
84 cd03811 GT1_WabH_like This fam 97.3 0.079 1.7E-06 49.0 21.4 79 274-363 245-331 (353)
85 cd03795 GT1_like_4 This family 97.2 0.0056 1.2E-07 57.6 12.7 82 274-363 243-331 (357)
86 PRK09814 beta-1,6-galactofuran 97.1 0.0036 7.8E-08 58.8 10.4 107 275-394 207-331 (333)
87 COG0381 WecB UDP-N-acetylgluco 97.1 0.094 2E-06 49.0 18.6 106 276-400 263-372 (383)
88 PF00534 Glycos_transf_1: Glyc 97.0 0.004 8.6E-08 52.1 8.8 78 275-363 73-157 (172)
89 cd04946 GT1_AmsK_like This fam 97.0 0.019 4.1E-07 55.6 14.5 82 274-363 288-376 (407)
90 COG5017 Uncharacterized conser 97.0 0.0035 7.6E-08 48.9 7.3 63 277-341 48-121 (161)
91 TIGR03087 stp1 sugar transfera 97.0 0.0073 1.6E-07 58.2 11.6 77 274-363 279-361 (397)
92 cd03821 GT1_Bme6_like This fam 97.0 0.021 4.5E-07 53.6 14.6 77 274-363 261-344 (375)
93 PLN02949 transferase, transfer 97.0 0.11 2.3E-06 51.2 19.5 78 274-364 334-422 (463)
94 cd03807 GT1_WbnK_like This fam 96.8 0.015 3.3E-07 54.3 11.6 77 275-364 251-332 (365)
95 PRK09922 UDP-D-galactose:(gluc 96.7 0.049 1.1E-06 51.7 14.6 80 274-364 235-324 (359)
96 TIGR03088 stp2 sugar transfera 96.7 0.036 7.7E-07 52.8 13.8 77 276-363 256-337 (374)
97 cd03799 GT1_amsK_like This is 96.7 0.035 7.7E-07 52.0 13.2 80 274-364 235-327 (355)
98 PLN02501 digalactosyldiacylgly 96.7 0.35 7.6E-06 49.1 20.0 74 277-364 603-681 (794)
99 cd04951 GT1_WbdM_like This fam 96.6 0.051 1.1E-06 51.1 14.0 88 275-377 245-337 (360)
100 cd03825 GT1_wcfI_like This fam 96.6 0.07 1.5E-06 50.2 14.3 78 275-363 244-329 (365)
101 cd03809 GT1_mtfB_like This fam 96.4 0.068 1.5E-06 50.1 13.1 89 274-378 252-347 (365)
102 PF13844 Glyco_transf_41: Glyc 96.3 0.14 3.1E-06 49.7 14.4 127 224-363 294-429 (468)
103 TIGR02149 glgA_Coryne glycogen 96.2 0.073 1.6E-06 50.9 12.5 78 277-363 262-351 (388)
104 PF13692 Glyco_trans_1_4: Glyc 96.1 0.014 3.1E-07 46.5 6.0 79 274-363 52-134 (135)
105 cd04949 GT1_gtfA_like This fam 96.1 0.043 9.2E-07 52.2 10.1 82 275-364 261-345 (372)
106 PRK10017 colanic acid biosynth 96.1 0.31 6.6E-06 47.3 15.5 99 287-396 323-422 (426)
107 cd03813 GT1_like_3 This family 96.0 0.3 6.6E-06 48.3 15.5 86 274-373 353-448 (475)
108 cd03805 GT1_ALG2_like This fam 95.9 0.19 4.2E-06 48.0 13.9 79 274-364 279-364 (392)
109 cd03812 GT1_CapH_like This fam 95.8 0.097 2.1E-06 49.2 11.1 83 275-372 249-336 (358)
110 TIGR02918 accessory Sec system 95.7 0.074 1.6E-06 52.8 9.9 83 275-363 376-466 (500)
111 cd03792 GT1_Trehalose_phosphor 95.6 0.48 1E-05 45.1 15.0 106 275-396 252-369 (372)
112 PF13524 Glyco_trans_1_2: Glyc 95.4 0.23 5E-06 36.6 9.5 81 300-393 9-91 (92)
113 cd04950 GT1_like_1 Glycosyltra 95.3 0.21 4.6E-06 47.6 11.3 107 274-397 253-370 (373)
114 PF12000 Glyco_trans_4_3: Gkyc 95.2 0.36 7.8E-06 40.2 11.0 94 1-107 1-96 (171)
115 cd03802 GT1_AviGT4_like This f 95.1 0.53 1.1E-05 43.7 13.4 79 274-363 223-307 (335)
116 PHA01633 putative glycosyl tra 94.9 0.19 4.1E-06 47.0 9.5 81 276-363 202-306 (335)
117 PLN02275 transferase, transfer 94.7 0.14 3E-06 48.9 8.1 75 275-362 286-371 (371)
118 PRK14098 glycogen synthase; Pr 94.6 0.42 9E-06 47.4 11.7 81 275-362 362-449 (489)
119 TIGR02095 glgA glycogen/starch 94.2 0.97 2.1E-05 44.7 13.2 82 275-363 346-436 (473)
120 PRK15490 Vi polysaccharide bio 94.2 1.2 2.7E-05 44.3 13.5 62 274-341 454-520 (578)
121 cd03791 GT1_Glycogen_synthase_ 93.8 0.53 1.1E-05 46.5 10.5 81 275-363 351-441 (476)
122 PRK00654 glgA glycogen synthas 93.7 1.1 2.3E-05 44.3 12.4 70 287-363 352-427 (466)
123 TIGR02400 trehalose_OtsA alpha 93.3 1.2 2.6E-05 43.7 11.9 101 281-396 342-454 (456)
124 PLN02846 digalactosyldiacylgly 93.2 1.4 3E-05 43.1 11.9 72 279-364 288-363 (462)
125 PHA01630 putative group 1 glyc 93.1 0.82 1.8E-05 42.8 10.0 107 282-396 197-328 (331)
126 TIGR03713 acc_sec_asp1 accesso 93.0 0.44 9.5E-06 47.5 8.3 73 276-364 410-488 (519)
127 COG4370 Uncharacterized protei 92.4 0.34 7.3E-06 43.6 5.8 83 281-375 301-387 (412)
128 COG0763 LpxB Lipid A disacchar 91.9 11 0.00025 35.5 18.6 106 287-395 260-377 (381)
129 KOG4626 O-linked N-acetylgluco 89.9 2.9 6.4E-05 41.6 10.0 110 224-342 768-888 (966)
130 PF13579 Glyco_trans_4_4: Glyc 89.0 0.23 5E-06 40.2 1.8 85 1-107 16-104 (160)
131 cd01635 Glycosyltransferase_GT 89.0 2.5 5.4E-05 36.2 8.4 50 274-325 160-217 (229)
132 cd03788 GT1_TPS Trehalose-6-Ph 88.5 2.2 4.8E-05 42.0 8.5 101 280-395 346-458 (460)
133 PF13477 Glyco_trans_4_2: Glyc 87.8 4.2 9E-05 32.2 8.4 81 2-107 23-107 (139)
134 PLN03063 alpha,alpha-trehalose 85.9 8.1 0.00018 40.9 11.2 95 287-396 371-475 (797)
135 TIGR02470 sucr_synth sucrose s 84.9 8.5 0.00018 40.3 10.6 50 304-362 658-707 (784)
136 PRK14099 glycogen synthase; Pr 84.7 18 0.0004 35.9 12.7 79 278-363 354-446 (485)
137 PLN00142 sucrose synthase 83.7 11 0.00025 39.5 10.9 60 292-362 667-730 (815)
138 PRK10125 putative glycosyl tra 83.5 8.1 0.00018 37.3 9.4 60 287-358 302-365 (405)
139 TIGR02193 heptsyl_trn_I lipopo 83.4 5.7 0.00012 36.8 8.1 122 226-362 194-319 (319)
140 TIGR02919 accessory Sec system 82.8 6.6 0.00014 38.3 8.4 78 275-363 328-410 (438)
141 COG3914 Spy Predicted O-linked 82.2 17 0.00036 36.2 10.7 124 225-359 440-573 (620)
142 cd03793 GT1_Glycogen_synthase_ 78.4 34 0.00074 34.5 11.7 78 285-363 468-551 (590)
143 PF04464 Glyphos_transf: CDP-G 78.2 4.7 0.0001 38.3 5.7 111 275-397 252-368 (369)
144 COG0438 RfaG Glycosyltransfera 77.6 38 0.00082 30.6 11.7 78 275-363 257-341 (381)
145 PLN02939 transferase, transfer 76.1 28 0.0006 37.3 10.8 81 275-363 837-930 (977)
146 COG1817 Uncharacterized protei 75.8 12 0.00025 34.3 7.0 42 67-109 73-114 (346)
147 PLN02316 synthase/transferase 75.2 1.2E+02 0.0026 33.1 15.4 80 276-363 901-997 (1036)
148 PF06925 MGDG_synth: Monogalac 75.1 8.9 0.00019 31.8 6.0 44 64-107 75-124 (169)
149 PRK13931 stationary phase surv 70.0 29 0.00064 31.2 8.2 87 3-107 30-129 (261)
150 PLN00142 sucrose synthase 69.0 19 0.00041 38.0 7.7 31 78-108 408-440 (815)
151 PF01975 SurE: Survival protei 68.3 12 0.00026 32.0 5.3 96 2-108 26-134 (196)
152 TIGR02470 sucr_synth sucrose s 64.9 34 0.00074 36.0 8.6 32 77-108 384-417 (784)
153 PRK14501 putative bifunctional 64.4 20 0.00044 37.6 7.1 107 279-396 346-460 (726)
154 PF07355 GRDB: Glycine/sarcosi 62.0 17 0.00037 33.8 5.2 45 63-107 65-119 (349)
155 PF13439 Glyco_transf_4: Glyco 60.4 12 0.00026 30.4 3.9 43 67-110 69-112 (177)
156 PRK12342 hypothetical protein; 59.6 16 0.00035 32.7 4.6 40 69-108 100-145 (254)
157 TIGR00236 wecB UDP-N-acetylglu 59.3 15 0.00032 34.7 4.7 41 65-105 73-116 (365)
158 cd07037 TPP_PYR_MenD Pyrimidin 59.1 18 0.00038 30.0 4.5 28 294-321 61-94 (162)
159 PLN02846 digalactosyldiacylgly 56.5 44 0.00094 32.9 7.4 41 67-108 105-150 (462)
160 PRK03359 putative electron tra 56.3 20 0.00044 32.1 4.7 40 69-108 103-148 (256)
161 TIGR02398 gluc_glyc_Psyn gluco 54.6 1.7E+02 0.0037 29.1 11.1 107 277-398 364-482 (487)
162 PF07429 Glyco_transf_56: 4-al 54.2 48 0.0011 31.0 6.8 82 275-363 245-332 (360)
163 cd03789 GT1_LPS_heptosyltransf 54.1 43 0.00092 30.3 6.6 83 227-319 137-223 (279)
164 cd07039 TPP_PYR_POX Pyrimidine 52.5 41 0.00089 27.8 5.7 29 293-321 63-97 (164)
165 TIGR01917 gly_red_sel_B glycin 52.3 30 0.00066 33.1 5.3 44 63-106 61-114 (431)
166 TIGR01918 various_sel_PB selen 52.3 31 0.00067 33.1 5.3 44 64-107 62-115 (431)
167 cd03805 GT1_ALG2_like This fam 50.2 81 0.0018 29.8 8.2 33 74-107 90-123 (392)
168 cd01141 TroA_d Periplasmic bin 50.1 30 0.00065 29.0 4.6 38 68-106 60-99 (186)
169 cd03802 GT1_AviGT4_like This f 50.0 52 0.0011 30.1 6.7 41 67-108 76-116 (335)
170 COG0496 SurE Predicted acid ph 49.0 51 0.0011 29.4 5.9 86 3-106 26-124 (252)
171 PLN02929 NADH kinase 47.9 2E+02 0.0043 26.5 9.7 66 290-364 63-137 (301)
172 PRK10964 ADP-heptose:LPS hepto 47.9 35 0.00075 31.7 5.1 120 226-363 193-321 (322)
173 PF04558 tRNA_synt_1c_R1: Glut 47.1 18 0.00038 30.0 2.6 30 326-363 102-131 (164)
174 PF06258 Mito_fiss_Elm1: Mitoc 46.8 31 0.00068 32.0 4.5 57 284-341 221-280 (311)
175 cd01981 Pchlide_reductase_B Pc 46.8 33 0.00071 33.5 4.9 37 68-107 360-396 (430)
176 cd03466 Nitrogenase_NifN_2 Nit 46.2 33 0.00071 33.5 4.8 36 68-106 362-397 (429)
177 PRK01231 ppnK inorganic polyph 46.0 2.2E+02 0.0047 26.2 9.8 53 291-364 62-118 (295)
178 PF05159 Capsule_synth: Capsul 45.6 29 0.00062 31.3 4.0 42 277-321 185-226 (269)
179 KOG0574 STE20-like serine/thre 45.1 51 0.0011 30.2 5.3 62 287-383 96-157 (502)
180 cd07035 TPP_PYR_POX_like Pyrim 43.4 45 0.00098 27.0 4.6 28 294-321 60-93 (155)
181 PRK02797 4-alpha-L-fucosyltran 43.3 91 0.002 28.8 6.7 77 279-362 211-292 (322)
182 cd01965 Nitrogenase_MoFe_beta_ 43.2 40 0.00086 32.9 4.9 37 67-106 360-396 (428)
183 COG0052 RpsB Ribosomal protein 43.2 40 0.00088 29.8 4.3 32 79-110 157-190 (252)
184 cd03786 GT1_UDP-GlcNAc_2-Epime 43.2 34 0.00073 32.1 4.3 41 66-106 76-119 (363)
185 CHL00076 chlB photochlorophyll 43.0 37 0.00081 33.9 4.7 37 67-106 363-399 (513)
186 PRK02910 light-independent pro 42.9 40 0.00087 33.8 4.9 36 68-106 352-387 (519)
187 PRK09219 xanthine phosphoribos 42.4 45 0.00098 28.4 4.5 43 66-108 38-82 (189)
188 TIGR01278 DPOR_BchB light-inde 41.3 43 0.00093 33.5 4.8 37 68-107 354-390 (511)
189 PRK03372 ppnK inorganic polyph 41.3 74 0.0016 29.4 6.0 54 290-364 71-128 (306)
190 PF10083 DUF2321: Uncharacteri 41.0 64 0.0014 26.2 4.7 69 319-396 78-149 (158)
191 TIGR02201 heptsyl_trn_III lipo 40.8 74 0.0016 29.8 6.2 86 226-319 196-285 (344)
192 PRK00039 ruvC Holliday junctio 40.8 69 0.0015 26.5 5.2 48 61-108 44-106 (164)
193 PF06506 PrpR_N: Propionate ca 40.7 23 0.0005 29.7 2.4 32 291-323 32-63 (176)
194 PRK04539 ppnK inorganic polyph 40.7 85 0.0018 28.9 6.3 54 290-364 67-124 (296)
195 PF05225 HTH_psq: helix-turn-h 40.6 34 0.00074 21.3 2.6 27 350-378 1-27 (45)
196 PRK04885 ppnK inorganic polyph 39.9 75 0.0016 28.7 5.7 52 291-363 35-92 (265)
197 TIGR01286 nifK nitrogenase mol 39.0 48 0.001 33.2 4.7 37 67-106 426-462 (515)
198 cd01976 Nitrogenase_MoFe_alpha 38.7 39 0.00084 32.9 4.0 37 67-106 358-394 (421)
199 smart00096 UTG Uteroglobin. 38.4 1.3E+02 0.0029 20.8 5.8 46 349-397 16-64 (69)
200 PRK02155 ppnK NAD(+)/NADH kina 38.3 89 0.0019 28.7 6.0 53 290-363 62-118 (291)
201 PRK07710 acetolactate synthase 38.1 1.2E+02 0.0026 30.8 7.6 28 293-320 78-111 (571)
202 cd03812 GT1_CapH_like This fam 38.0 1.8E+02 0.0038 26.8 8.4 37 70-106 72-110 (358)
203 cd01974 Nitrogenase_MoFe_beta 37.9 60 0.0013 31.7 5.1 37 67-106 366-402 (435)
204 PLN02859 glutamine-tRNA ligase 37.8 76 0.0016 33.3 5.9 49 327-383 105-157 (788)
205 PRK14077 pnk inorganic polypho 37.8 84 0.0018 28.7 5.8 55 289-364 62-120 (287)
206 TIGR00228 ruvC crossover junct 37.6 82 0.0018 25.9 5.1 49 60-108 39-102 (156)
207 TIGR01285 nifN nitrogenase mol 37.5 58 0.0013 31.8 5.0 36 68-106 363-398 (432)
208 PRK08673 3-deoxy-7-phosphohept 36.6 2.6E+02 0.0056 26.2 8.8 32 312-343 261-298 (335)
209 PRK10422 lipopolysaccharide co 36.6 1.1E+02 0.0024 28.7 6.7 86 226-319 198-287 (352)
210 cd01147 HemV-2 Metal binding p 36.3 64 0.0014 28.6 4.8 40 68-108 65-107 (262)
211 PRK01911 ppnK inorganic polyph 36.1 95 0.0021 28.5 5.8 57 287-364 60-120 (292)
212 PF10820 DUF2543: Protein of u 36.0 1.4E+02 0.003 20.6 5.0 40 355-399 37-78 (81)
213 PRK15411 rcsA colanic acid cap 35.3 81 0.0018 27.1 5.1 40 69-108 38-86 (207)
214 cd07038 TPP_PYR_PDC_IPDC_like 35.3 1.1E+02 0.0024 25.1 5.7 29 293-321 59-93 (162)
215 PF05728 UPF0227: Uncharacteri 34.9 58 0.0013 27.6 4.0 43 68-110 47-92 (187)
216 PF01497 Peripla_BP_2: Peripla 34.8 47 0.001 28.9 3.6 41 68-109 51-93 (238)
217 PRK14478 nitrogenase molybdenu 34.8 49 0.0011 32.8 4.0 34 68-104 383-416 (475)
218 cd01980 Chlide_reductase_Y Chl 34.6 64 0.0014 31.3 4.7 34 71-107 343-376 (416)
219 PLN02275 transferase, transfer 34.4 3.8E+02 0.0083 25.2 10.0 34 75-108 97-135 (371)
220 PLN02293 adenine phosphoribosy 34.2 89 0.0019 26.5 5.0 42 65-106 49-92 (187)
221 cd01143 YvrC Periplasmic bindi 34.1 75 0.0016 26.6 4.7 39 68-107 51-90 (195)
222 PF00731 AIRC: AIR carboxylase 34.1 2.5E+02 0.0055 22.8 7.3 127 229-383 13-148 (150)
223 PF00282 Pyridoxal_deC: Pyrido 34.0 1.2E+02 0.0025 29.0 6.3 70 293-363 103-190 (373)
224 TIGR01012 Sa_S2_E_A ribosomal 33.7 58 0.0013 27.8 3.8 32 78-109 108-141 (196)
225 PRK10916 ADP-heptose:LPS hepto 33.1 89 0.0019 29.3 5.4 84 226-319 196-286 (348)
226 COG2327 WcaK Polysaccharide py 32.8 2.8E+02 0.006 26.6 8.4 77 286-373 280-357 (385)
227 PRK14075 pnk inorganic polypho 32.7 1.1E+02 0.0024 27.4 5.6 53 291-364 41-94 (256)
228 PHA02754 hypothetical protein; 32.4 85 0.0018 20.7 3.4 29 350-385 3-31 (67)
229 PF00391 PEP-utilizers: PEP-ut 32.3 53 0.0012 23.3 2.9 30 78-107 30-61 (80)
230 COG0503 Apt Adenine/guanine ph 32.3 1.1E+02 0.0024 25.7 5.2 38 69-106 44-83 (179)
231 TIGR02195 heptsyl_trn_II lipop 32.1 1.5E+02 0.0033 27.4 6.8 82 227-319 191-276 (334)
232 COG3195 Uncharacterized protei 32.0 2.1E+02 0.0046 23.6 6.4 91 289-382 70-164 (176)
233 KOG1344 Predicted histone deac 31.9 1.6E+02 0.0036 25.8 6.1 44 66-109 236-301 (324)
234 TIGR01862 N2-ase-Ialpha nitrog 31.3 57 0.0012 32.0 3.8 34 69-105 378-411 (443)
235 PRK02231 ppnK inorganic polyph 31.3 1.3E+02 0.0029 27.2 5.9 57 286-363 37-97 (272)
236 PRK03378 ppnK inorganic polyph 31.1 1.1E+02 0.0025 28.0 5.5 56 288-364 60-119 (292)
237 KOG0853 Glycosyltransferase [C 30.8 45 0.00097 32.9 2.9 66 299-375 376-441 (495)
238 PRK02649 ppnK inorganic polyph 30.8 1.3E+02 0.0028 27.9 5.8 54 290-364 67-124 (305)
239 cd03791 GT1_Glycogen_synthase_ 30.7 3.3E+02 0.0072 26.6 9.3 30 297-326 353-383 (476)
240 PRK12311 rpsB 30S ribosomal pr 30.4 70 0.0015 29.8 4.0 33 78-110 152-186 (326)
241 cd06559 Endonuclease_V Endonuc 30.4 64 0.0014 27.9 3.5 42 67-108 80-130 (208)
242 PF04413 Glycos_transf_N: 3-De 30.3 59 0.0013 27.6 3.3 41 67-107 84-126 (186)
243 PRK03708 ppnK inorganic polyph 30.2 90 0.002 28.4 4.7 52 291-363 57-111 (277)
244 TIGR01284 alt_nitrog_alph nitr 30.1 54 0.0012 32.3 3.4 34 69-105 386-419 (457)
245 PF01075 Glyco_transf_9: Glyco 30.0 1.1E+02 0.0023 26.9 5.2 87 225-319 119-208 (247)
246 TIGR02015 BchY chlorophyllide 29.7 64 0.0014 31.4 3.8 32 72-106 349-380 (422)
247 PRK04020 rps2P 30S ribosomal p 29.6 68 0.0015 27.7 3.5 32 78-109 114-147 (204)
248 PRK04940 hypothetical protein; 29.3 94 0.002 26.2 4.2 32 78-109 60-92 (180)
249 PF02075 RuvC: Crossover junct 29.3 1E+02 0.0022 25.0 4.4 49 60-108 40-103 (149)
250 PHA01794 hypothetical protein 29.2 2.2E+02 0.0049 22.2 5.8 51 349-399 50-104 (134)
251 cd08806 CARD_CARD14_CARMA2 Cas 29.2 1.5E+02 0.0033 21.5 4.6 36 359-397 37-75 (86)
252 cd03818 GT1_ExpC_like This fam 29.1 1.9E+02 0.0041 27.5 7.0 24 229-252 10-33 (396)
253 KOG1387 Glycosyltransferase [C 28.8 5.1E+02 0.011 24.6 16.4 102 274-385 336-447 (465)
254 cd00633 Secretoglobin Secretog 28.5 1.9E+02 0.0042 19.6 5.9 45 350-397 15-62 (67)
255 TIGR01860 VNFD nitrogenase van 28.4 73 0.0016 31.4 4.0 31 70-103 389-419 (461)
256 COG4394 Uncharacterized protei 28.4 4.7E+02 0.01 24.0 11.4 55 276-333 239-296 (370)
257 COG2874 FlaH Predicted ATPases 28.3 33 0.0007 29.8 1.3 71 2-90 55-135 (235)
258 TIGR00173 menD 2-succinyl-5-en 28.1 99 0.0021 30.1 4.9 27 294-320 64-96 (432)
259 TIGR01283 nifE nitrogenase mol 28.0 89 0.0019 30.7 4.6 37 67-106 384-420 (456)
260 PRK06882 acetolactate synthase 27.8 74 0.0016 32.4 4.1 28 293-320 67-100 (574)
261 cd07025 Peptidase_S66 LD-Carbo 27.6 1.4E+02 0.0031 27.1 5.6 76 225-322 44-121 (282)
262 PF07302 AroM: AroM protein; 27.6 1E+02 0.0022 26.9 4.3 35 73-107 173-210 (221)
263 PF10093 DUF2331: Uncharacteri 27.5 5.5E+02 0.012 24.5 11.5 44 276-322 245-291 (374)
264 PRK07525 sulfoacetaldehyde ace 27.4 3.5E+02 0.0076 27.6 8.9 78 232-320 9-101 (588)
265 TIGR01744 XPRTase xanthine pho 27.3 1.1E+02 0.0025 26.0 4.5 41 67-107 39-81 (191)
266 PF05693 Glycogen_syn: Glycoge 27.1 1.6E+02 0.0035 30.0 6.0 93 284-381 462-566 (633)
267 TIGR03457 sulphoacet_xsc sulfo 27.1 3.5E+02 0.0075 27.6 8.8 28 293-320 64-97 (579)
268 PRK03501 ppnK inorganic polyph 27.1 1.8E+02 0.0038 26.3 5.9 54 291-364 39-97 (264)
269 PRK13932 stationary phase surv 26.4 91 0.002 28.0 3.9 25 297-321 108-133 (257)
270 cd01977 Nitrogenase_VFe_alpha 26.0 73 0.0016 30.9 3.5 33 70-105 350-382 (415)
271 COG2099 CobK Precorrin-6x redu 25.8 1.3E+02 0.0029 26.8 4.7 38 67-105 55-99 (257)
272 COG4069 Uncharacterized protei 25.8 5E+02 0.011 23.8 8.1 91 287-385 262-357 (367)
273 COG2230 Cfa Cyclopropane fatty 25.7 71 0.0015 29.1 3.1 39 300-338 80-121 (283)
274 COG2987 HutU Urocanate hydrata 25.5 1.7E+02 0.0038 28.4 5.6 42 277-318 465-508 (561)
275 PLN02935 Bifunctional NADH kin 25.5 2E+02 0.0043 28.6 6.2 54 290-364 261-318 (508)
276 PRK06276 acetolactate synthase 25.2 97 0.0021 31.6 4.4 28 293-320 63-96 (586)
277 PHA02698 hypothetical protein; 25.1 2.5E+02 0.0053 19.7 5.3 29 347-378 39-67 (89)
278 cd01425 RPS2 Ribosomal protein 24.7 1E+02 0.0022 26.3 3.8 32 78-109 127-160 (193)
279 TIGR02418 acolac_catab acetola 24.7 2.2E+02 0.0047 28.7 6.8 29 293-321 61-95 (539)
280 PRK08527 acetolactate synthase 23.9 93 0.002 31.6 4.0 28 293-320 66-99 (563)
281 PRK08558 adenine phosphoribosy 23.9 1E+02 0.0022 27.3 3.8 38 69-106 102-141 (238)
282 cd00529 RuvC_resolvase Hollida 23.8 2.4E+02 0.0052 22.9 5.7 25 62-86 43-67 (154)
283 PTZ00254 40S ribosomal protein 23.7 1.1E+02 0.0024 27.3 3.8 32 78-109 118-151 (249)
284 PLN03064 alpha,alpha-trehalose 23.5 5.7E+02 0.012 27.9 9.6 97 283-396 448-559 (934)
285 cd01148 TroA_a Metal binding p 23.4 94 0.002 28.0 3.6 38 68-106 70-113 (284)
286 PF04493 Endonuclease_5: Endon 23.4 1.4E+02 0.003 25.9 4.3 43 67-109 76-127 (206)
287 cd01968 Nitrogenase_NifE_I Nit 23.4 1.1E+02 0.0023 29.6 4.2 35 68-105 346-380 (410)
288 KOG1432 Predicted DNA repair e 23.2 1.3E+02 0.0027 28.2 4.2 42 67-108 89-143 (379)
289 PRK03379 vitamin B12-transport 23.1 1.5E+02 0.0032 26.5 4.8 39 68-107 63-103 (260)
290 PRK14477 bifunctional nitrogen 22.7 1.1E+02 0.0023 33.3 4.3 38 67-107 378-415 (917)
291 cd01971 Nitrogenase_VnfN_like 22.7 1.4E+02 0.0029 29.2 4.7 35 69-106 358-396 (427)
292 PF12000 Glyco_trans_4_3: Gkyc 22.5 46 0.001 27.8 1.2 29 292-322 67-97 (171)
293 TIGR01282 nifD nitrogenase mol 22.5 58 0.0013 32.2 2.1 36 67-105 393-428 (466)
294 PRK08979 acetolactate synthase 22.4 1.1E+02 0.0024 31.1 4.2 28 293-320 67-100 (572)
295 PRK05299 rpsB 30S ribosomal pr 22.3 1.1E+02 0.0023 27.6 3.5 33 78-110 157-191 (258)
296 COG2086 FixA Electron transfer 22.3 1.5E+02 0.0032 26.7 4.4 42 67-108 100-147 (260)
297 COG0859 RfaF ADP-heptose:LPS h 22.2 1.9E+02 0.004 27.1 5.4 84 226-320 191-277 (334)
298 PF14565 IL22: Interleukin 22 22.1 2.6E+02 0.0056 22.4 5.2 33 367-399 99-131 (139)
299 PRK09213 pur operon repressor; 22.1 1.4E+02 0.0031 27.0 4.3 39 69-107 121-161 (271)
300 TIGR01743 purR_Bsub pur operon 22.1 1.4E+02 0.003 27.0 4.2 39 69-107 119-159 (268)
301 PLN02470 acetolactate synthase 21.9 97 0.0021 31.6 3.7 29 293-321 76-110 (585)
302 PF07894 DUF1669: Protein of u 21.8 99 0.0022 28.1 3.2 43 66-108 135-183 (284)
303 PRK00994 F420-dependent methyl 21.7 1.8E+02 0.0039 25.7 4.6 41 69-109 51-97 (277)
304 TIGR01861 ANFD nitrogenase iro 21.6 1.1E+02 0.0024 30.6 3.9 31 72-105 392-422 (513)
305 TIGR00087 surE 5'/3'-nucleotid 21.6 1.3E+02 0.0027 26.9 3.8 26 297-322 103-129 (244)
306 PRK14076 pnk inorganic polypho 21.4 1.9E+02 0.0041 29.5 5.5 51 295-364 350-404 (569)
307 cd01149 HutB Hemin binding pro 21.4 1.6E+02 0.0034 25.7 4.5 35 72-106 52-88 (235)
308 COG3660 Predicted nucleoside-d 21.4 4.1E+02 0.0089 24.1 6.8 73 235-319 189-271 (329)
309 PRK13935 stationary phase surv 21.2 1.1E+02 0.0024 27.4 3.4 25 297-321 103-128 (253)
310 TIGR02482 PFKA_ATP 6-phosphofr 21.2 1E+02 0.0023 28.4 3.4 38 287-324 85-126 (301)
311 cd01973 Nitrogenase_VFe_beta_l 21.1 1.6E+02 0.0034 29.1 4.7 37 67-106 368-406 (454)
312 TIGR03492 conserved hypothetic 21.1 1.7E+02 0.0038 28.1 5.0 37 70-107 83-121 (396)
313 cd00316 Oxidoreductase_nitroge 20.9 1.5E+02 0.0032 28.3 4.6 38 67-107 337-374 (399)
314 cd01139 TroA_f Periplasmic bin 20.8 1.5E+02 0.0033 27.6 4.5 35 73-107 86-126 (342)
315 PRK08322 acetolactate synthase 20.7 1.3E+02 0.0028 30.3 4.3 28 293-320 63-96 (547)
316 cd01972 Nitrogenase_VnfE_like 20.7 1.4E+02 0.0031 29.0 4.4 38 68-106 363-400 (426)
317 PRK06456 acetolactate synthase 20.6 1.2E+02 0.0025 30.9 4.0 28 293-320 68-101 (572)
318 PF02776 TPP_enzyme_N: Thiamin 20.6 2.7E+02 0.0059 22.9 5.6 29 293-321 64-98 (172)
319 TIGR00715 precor6x_red precorr 20.5 1.8E+02 0.0039 26.1 4.6 38 67-105 54-98 (256)
320 cd01715 ETF_alpha The electron 20.3 2.2E+02 0.0047 23.4 4.9 43 66-108 71-116 (168)
321 TIGR03394 indol_phenyl_DC indo 20.1 7.5E+02 0.016 24.9 9.5 27 294-320 64-96 (535)
322 PRK08057 cobalt-precorrin-6x r 20.1 2.2E+02 0.0047 25.5 5.0 40 67-107 54-100 (248)
323 CHL00067 rps2 ribosomal protei 20.0 1.3E+02 0.0028 26.5 3.6 33 78-110 161-195 (230)
324 TIGR02931 anfK_nitrog Fe-only 20.0 1.7E+02 0.0037 28.8 4.8 36 68-106 376-413 (461)
No 1
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=6.9e-60 Score=452.46 Aligned_cols=397 Identities=31% Similarity=0.515 Sum_probs=299.3
Q ss_pred CCCeEEEEEeCCccchhhhccc-cCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhcCC
Q 038300 1 GSNFHICFCSTPSILNSIKQLD-KFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNLSP 79 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~-~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~p 79 (401)
+||++|||++|+.+..++.+.. ...++++|+.+|+|..+|+|.+.+...+.+......+..+...+.+.+++++++.++
T Consensus 32 ~~G~~vT~v~t~~n~~~~~~~~~~~~~~i~~~~lp~p~~dglp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 111 (472)
T PLN02670 32 QKGHKISFISTPRNLHRLPKIPSQLSSSITLVSFPLPSVPGLPSSAESSTDVPYTKQQLLKKAFDLLEPPLTTFLETSKP 111 (472)
T ss_pred hCCCEEEEEeCCchHHhhhhccccCCCCeeEEECCCCccCCCCCCcccccccchhhHHHHHHHHHHhHHHHHHHHHhCCC
Confidence 4799999999999987776431 122469999999998889987765444333222345567777889999999998889
Q ss_pred CEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcc----cC-CCCCCCC-CCCC-CCC-----Cccccccccc
Q 038300 80 DLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIK----KN-SLGDAND-DDEE-FPS-----SSIFIHDYYM 147 (401)
Q Consensus 80 D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~----~~-~~~~~p~-~~~~-~~~-----~~~~~~~~~~ 147 (401)
+|||+|++++|+.++|+++|||+++|++++++..+.++++.. .. +..-.+. ..+. .|. +...+++.++
T Consensus 112 ~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~P~~~~~~~~~~dlp~~~ 191 (472)
T PLN02670 112 DWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGGDLRSTAEDFTVVPPWVPFESNIVFRYHEVTKYV 191 (472)
T ss_pred cEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhcccCCCccccccCCCCcCCCCccccccHHHhhHHH
Confidence 999999999999999999999999999999888776543311 00 0000000 0111 111 1122344333
Q ss_pred cccC-CCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCC--CCCC-C-cc---cchHh
Q 038300 148 KSYF-SNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQD--PVEQ-T-DH---EKGAT 219 (401)
Q Consensus 148 ~~~~-~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~--~~~~-~-~~---~~~~~ 219 (401)
.... .... ...+.+....+.+ ++++|+|||.+||+.++++++..+++++++||||... .... . .+ .++|.
T Consensus 192 ~~~~~~~~~-~~~~~~~~~~~~~-~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~ 269 (472)
T PLN02670 192 EKTEEDETG-PSDSVRFGFAIGG-SDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFLPPVIEDDEEDDTIDVKGWVRIK 269 (472)
T ss_pred hccCccchH-HHHHHHHHhhccc-CCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecCCccccccccccccccchhHHHH
Confidence 2111 1000 1112233334455 8899999999999999999987666689999999753 1111 1 01 13599
Q ss_pred hhhh--------------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCch
Q 038300 220 EIIH--------------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQ 285 (401)
Q Consensus 220 ~~l~--------------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 285 (401)
+||| ...++.+++.+++.+|+.++++|||+++...+...+....+|++|.+++.++|+++.+|+||
T Consensus 270 ~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ 349 (472)
T PLN02670 270 EWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQ 349 (472)
T ss_pred HHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCH
Confidence 9999 56789999999999999999999999985322111112358999999999999999999999
Q ss_pred hhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccC-CCCCCHHHHHHHHHHHhcC
Q 038300 286 MKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNK-CGRIQREEMARVIKEVVME 364 (401)
Q Consensus 286 ~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~-~~~~~~~~l~~~i~~~l~~ 364 (401)
.+||+|+++++|||||||||++|++++|||||++|+++||+.||+++++.|+|+.+.+.+ .+.++.++|+++|+++|.+
T Consensus 350 ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~ 429 (472)
T PLN02670 350 VKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAESVRLAMVD 429 (472)
T ss_pred HHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999899999995421 2458999999999999986
Q ss_pred cccHHHHHHHHHHHHHHHhhc--HHHHHHHHHHHHhh
Q 038300 365 REGEKIKRKTREMGEKIKEKG--EEEIEWVADELIHL 399 (401)
Q Consensus 365 ~~~~~~~~~a~~~~~~~~~~~--~~~~~~~v~~~~~~ 399 (401)
+++++||+||+++++.+++++ .+.++.+++++.++
T Consensus 430 ~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 430 DAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred cchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 667899999999999999977 77888888888654
No 2
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=1.5e-58 Score=439.72 Aligned_cols=393 Identities=27% Similarity=0.463 Sum_probs=295.2
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhcCCC
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNLSPD 80 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD 80 (401)
++|++|||++|+.+..++......+.+++++.+++|..+|+|.+.+.+.+++......+..+...+.+++.++|++.+|+
T Consensus 31 ~~g~~vT~~tt~~~~~~~~~~~~~~~~~~v~~~~~p~~~glp~g~e~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~ 110 (453)
T PLN02764 31 EKGHTVTFLLPKKALKQLEHLNLFPHNIVFRSVTVPHVDGLPVGTETVSEIPVTSADLLMSAMDLTRDQVEVVVRAVEPD 110 (453)
T ss_pred hCCCEEEEEeCcchhhhhcccccCCCCceEEEEECCCcCCCCCcccccccCChhHHHHHHHHHHHhHHHHHHHHHhCCCC
Confidence 47999999999998776654311122444554454555788877665555554444557777777889999999988899
Q ss_pred EEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhccc---CCCCCCCCCCCCCCCCcccccccccc--ccCCCCC
Q 038300 81 LLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKK---NSLGDANDDDEEFPSSSIFIHDYYMK--SYFSNMV 155 (401)
Q Consensus 81 ~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~ 155 (401)
|||+|+ ++|+.++|+++|||++.|++++++.++.+..+... +.+++ |.... .++...++.+.. +......
T Consensus 111 ~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~pgl-p~~~v---~l~~~~l~~~~~~~~~~~~~~ 185 (453)
T PLN02764 111 LIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASMLVPGGELGVPPPGY-PSSKV---LLRKQDAYTMKNLEPTNTIDV 185 (453)
T ss_pred EEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhcccccCCCCCCCC-CCCcc---cCcHhhCcchhhcCCCccchh
Confidence 999996 89999999999999999999999888776542111 11222 21000 011122222111 1000000
Q ss_pred CchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCCCCCCcccchHhhhhh------------
Q 038300 156 ESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDPVEQTDHEKGATEIIH------------ 223 (401)
Q Consensus 156 ~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~l~------------ 223 (401)
......++.+.+.. ++++|+|||.|||+.++++++...++++++||||..........+++|.+|||
T Consensus 186 ~~~~~~~~~~~~~~-s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~~~~~~~~~cl~WLD~q~~~sVvyvsf 264 (453)
T PLN02764 186 GPNLLERVTTSLMN-SDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPDKTRELEERWVKWLSGYEPDSVVFCAL 264 (453)
T ss_pred HHHHHHHHHHhhcc-CCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCccccccchhHHHHHHhCCCCCceEEEee
Confidence 12333444344556 88999999999999999999875556899999996532111111245999999
Q ss_pred --HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhhhcccCCcceEEecC
Q 038300 224 --EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMKILGHPSIGGFVSHC 301 (401)
Q Consensus 224 --~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~i~hg 301 (401)
...++.+++.+++.+|+.++.+|+|+++...+.. +....+|++|.+|+.++|+++.+|+||.+||+|+++++|||||
T Consensus 265 GS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~-~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~ 343 (453)
T PLN02764 265 GSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSS-TIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHC 343 (453)
T ss_pred cccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCc-chhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecC
Confidence 4457899999999999999999999999643322 1234699999999999999999999999999999999999999
Q ss_pred CchhHHHHHHhCCcEEecCCccchhhHHHHHHh-hCeeeeeeccCCCCCCHHHHHHHHHHHhcC--cccHHHHHHHHHHH
Q 038300 302 GWSSVMESMRLGVPIIAMPMHVDQPLNARLVED-VGIGLEVRRNKCGRIQREEMARVIKEVVME--REGEKIKRKTREMG 378 (401)
Q Consensus 302 G~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~-~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~--~~~~~~~~~a~~~~ 378 (401)
||||++|++++|||+|+||++.||+.||+++++ .|+|+.+.+++.+.++.++|+++|+++|++ ++++.+|+++++++
T Consensus 344 G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~ 423 (453)
T PLN02764 344 GFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWR 423 (453)
T ss_pred CchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Confidence 999999999999999999999999999999975 699998843111368999999999999975 34678999999999
Q ss_pred HHHHhhc--HHHHHHHHHHHHhhh
Q 038300 379 EKIKEKG--EEEIEWVADELIHLF 400 (401)
Q Consensus 379 ~~~~~~~--~~~~~~~v~~~~~~~ 400 (401)
+.++++| .++++++|+++.++.
T Consensus 424 ~~~~~~GSS~~~l~~lv~~~~~~~ 447 (453)
T PLN02764 424 ETLASPGLLTGYVDNFIESLQDLV 447 (453)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHhc
Confidence 9999988 789999999998875
No 3
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=1.9e-58 Score=441.91 Aligned_cols=389 Identities=26% Similarity=0.470 Sum_probs=297.7
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhcCCC
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNLSPD 80 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD 80 (401)
++|++|||++|+.++.+++.....+++++|..+++|..+++|.+.+...+.+......+..+...+.+.+++++++.+||
T Consensus 30 s~G~~VT~vtt~~~~~~i~~~~~~~~~i~~~~i~lP~~dGLP~g~e~~~~l~~~~~~~~~~a~~~l~~~l~~~L~~~~p~ 109 (446)
T PLN00414 30 EKGHRVTFFLPKKAHKQLQPLNLFPDSIVFEPLTLPPVDGLPFGAETASDLPNSTKKPIFDAMDLLRDQIEAKVRALKPD 109 (446)
T ss_pred hCCCEEEEEeCCchhhhhcccccCCCceEEEEecCCCcCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 47999999999998877765422234699988888877899877554444433334456777778889999999888899
Q ss_pred EEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhccc---CCCCCCCCCCCCCCCCccccccccccccCCCCCCc
Q 038300 81 LLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKK---NSLGDANDDDEEFPSSSIFIHDYYMKSYFSNMVES 157 (401)
Q Consensus 81 ~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (401)
|||+|+ ++|+.++|+++|||++.|++++++..+.++++... +.+++ |.....++... ..++.++.+ . .
T Consensus 110 cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~~~~~~~~pg~-p~~~~~~~~~~-~~~~~~~~~---~---~ 180 (446)
T PLN00414 110 LIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLAPRAELGFPPPDY-PLSKVALRGHD-ANVCSLFAN---S---H 180 (446)
T ss_pred EEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhCcHhhcCCCCCCC-CCCcCcCchhh-cccchhhcc---c---H
Confidence 999996 79999999999999999999999888876653221 12223 21100011000 001111110 0 1
Q ss_pred hHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCC-CC-CCcccchHhhhhh------------
Q 038300 158 PTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDP-VE-QTDHEKGATEIIH------------ 223 (401)
Q Consensus 158 ~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~-~~-~~~~~~~~~~~l~------------ 223 (401)
..+.+..+.+.+ ++++++|||.+||+.++++++..+++++++|||+.... .. ....+++|.+|||
T Consensus 181 ~~~~~~~~~~~~-~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~WLD~q~~~sVvyvsf 259 (446)
T PLN00414 181 ELFGLITKGLKN-CDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQNKSGKPLEDRWNHWLNGFEPGSVVFCAF 259 (446)
T ss_pred HHHHHHHHhhcc-CCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCcccccCcccHHHHHHHHhcCCCCceEEEee
Confidence 233344455566 89999999999999999999876666899999996532 11 1112245999999
Q ss_pred --HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhhhcccCCcceEEecC
Q 038300 224 --EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMKILGHPSIGGFVSHC 301 (401)
Q Consensus 224 --~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~i~hg 301 (401)
...++.+++.+++.+|+.+|.+|+|+++...+.. +....+|++|.++++++|+++.+|+||.+||+|+++++|||||
T Consensus 260 GS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~-~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~ 338 (446)
T PLN00414 260 GTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSS-TVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHC 338 (446)
T ss_pred cccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcc-cchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecC
Confidence 5567789999999999999999999998643321 1234689999999999999999999999999999999999999
Q ss_pred CchhHHHHHHhCCcEEecCCccchhhHHHHHHh-hCeeeeeeccCCCCCCHHHHHHHHHHHhcC--cccHHHHHHHHHHH
Q 038300 302 GWSSVMESMRLGVPIIAMPMHVDQPLNARLVED-VGIGLEVRRNKCGRIQREEMARVIKEVVME--REGEKIKRKTREMG 378 (401)
Q Consensus 302 G~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~-~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~--~~~~~~~~~a~~~~ 378 (401)
||||++||+++|||+|+||++.||+.||+++++ .|+|+.+.+++.+.+++++|+++|+++|.+ ++++.+|+++++++
T Consensus 339 G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~ 418 (446)
T PLN00414 339 GFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLK 418 (446)
T ss_pred chhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHH
Confidence 999999999999999999999999999999975 699999954212358999999999999974 34678999999999
Q ss_pred HHHHhhc--HHHHHHHHHHHHhhh
Q 038300 379 EKIKEKG--EEEIEWVADELIHLF 400 (401)
Q Consensus 379 ~~~~~~~--~~~~~~~v~~~~~~~ 400 (401)
+.+.+.| .+.++++|+++.++.
T Consensus 419 ~~~~~~gg~ss~l~~~v~~~~~~~ 442 (446)
T PLN00414 419 ETLVSPGLLSGYADKFVEALENEV 442 (446)
T ss_pred HHHHcCCCcHHHHHHHHHHHHHhc
Confidence 9998744 777999999987653
No 4
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=3.2e-58 Score=439.92 Aligned_cols=389 Identities=27% Similarity=0.475 Sum_probs=294.2
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhcCCC
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNLSPD 80 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD 80 (401)
+||++|||++++.+..++.+....+.+++|..+++|..+++|.+.+...+...++...+......+.+.+++++++.++|
T Consensus 30 ~~G~~VT~vtt~~~~~~i~~~~a~~~~i~~~~l~~p~~dgLp~g~~~~~~l~~~l~~~~~~~~~~~~~~l~~~L~~~~~~ 109 (442)
T PLN02208 30 EKGHRVTFLLPKKAQKQLEHHNLFPDSIVFHPLTIPPVNGLPAGAETTSDIPISMDNLLSEALDLTRDQVEAAVRALRPD 109 (442)
T ss_pred hCCCEEEEEeccchhhhhhcccCCCCceEEEEeCCCCccCCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 47999999999998888765422234688998887655788877554333333444556777888899999999999999
Q ss_pred EEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcc-c---CCCCCCCCCCCCCCCCccccccccccccCCCCCC
Q 038300 81 LLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIK-K---NSLGDANDDDEEFPSSSIFIHDYYMKSYFSNMVE 156 (401)
Q Consensus 81 ~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~-~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (401)
|||+| +++|+.++|+++|||++.|++++++.+. +.+... . +.+++ |.... .+....++.+ .... . ..
T Consensus 110 cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~~~~~~~~~pgl-p~~~~---~~~~~~~~~~-~~~~-~-~~ 180 (442)
T PLN02208 110 LIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVPGGKLGVPPPGY-PSSKV---LFRENDAHAL-ATLS-I-FY 180 (442)
T ss_pred EEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccCccccCCCCCCC-CCccc---ccCHHHcCcc-cccc-h-HH
Confidence 99999 5799999999999999999999998665 333211 1 11222 21100 0111222221 1000 0 00
Q ss_pred chHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCCCCCCcccchHhhhhh-------------
Q 038300 157 SPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDPVEQTDHEKGATEIIH------------- 223 (401)
Q Consensus 157 ~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~l~------------- 223 (401)
......+.+...+ ++++|+|||.|||+.++++++..+++++++|||+........+.+++|.+|||
T Consensus 181 ~~~~~~~~~~~~~-~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~wLd~~~~~sVvyvSfG 259 (442)
T PLN02208 181 KRLYHQITTGLKS-CDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPDTSKPLEEQWSHFLSGFPPKSVVFCSLG 259 (442)
T ss_pred HHHHHHHHhhhcc-CCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcCCCCCCHHHHHHHHhcCCCCcEEEEecc
Confidence 1122222234455 89999999999999999999877767999999997542111112345999999
Q ss_pred -HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhhhcccCCcceEEecCC
Q 038300 224 -EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMKILGHPSIGGFVSHCG 302 (401)
Q Consensus 224 -~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~i~hgG 302 (401)
...++.+++.+++.+|+.++.+|+|+++.+.+.. .....+|++|.+|+.++|+++.+|+||.+||+|+++|+||||||
T Consensus 260 S~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~-~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG 338 (442)
T PLN02208 260 SQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSS-TVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCG 338 (442)
T ss_pred ccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCccc-chhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCC
Confidence 3457889999999999889999999998642211 11245899999999999999999999999999999999999999
Q ss_pred chhHHHHHHhCCcEEecCCccchhhHHHHHHh-hCeeeeeeccCCCCCCHHHHHHHHHHHhcCc--ccHHHHHHHHHHHH
Q 038300 303 WSSVMESMRLGVPIIAMPMHVDQPLNARLVED-VGIGLEVRRNKCGRIQREEMARVIKEVVMER--EGEKIKRKTREMGE 379 (401)
Q Consensus 303 ~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~-~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~--~~~~~~~~a~~~~~ 379 (401)
|||++||+++|||||+||+++||+.||+++++ .|+|+.+.+++.+.+++++|+++|+++|+++ +++.+|++++++++
T Consensus 339 ~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~ 418 (442)
T PLN02208 339 PGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKE 418 (442)
T ss_pred chHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999887 6999999432123489999999999999753 47889999999999
Q ss_pred HHHhhc--HHHHHHHHHHHHhhh
Q 038300 380 KIKEKG--EEEIEWVADELIHLF 400 (401)
Q Consensus 380 ~~~~~~--~~~~~~~v~~~~~~~ 400 (401)
.+.+.| .+++.++|+++.+++
T Consensus 419 ~~~~~gsS~~~l~~~v~~l~~~~ 441 (442)
T PLN02208 419 ILVSPGLLTGYVDKFVEELQEYL 441 (442)
T ss_pred HHhcCCcHHHHHHHHHHHHHHhc
Confidence 998877 789999999997764
No 5
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=3e-57 Score=437.18 Aligned_cols=395 Identities=28% Similarity=0.452 Sum_probs=298.9
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhc--C
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNL--S 78 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~ 78 (401)
++|++|||++|+.+.+++.+.....++++|+.+|+|..+++|.+.+...+.+.+....+..+...+.+.+.+++++. +
T Consensus 35 ~~G~~VTfv~T~~n~~~~~~~~~~~~~i~~~~lp~P~~~~lPdG~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~ 114 (477)
T PLN02863 35 LRGLTITVLVTPKNLPFLNPLLSKHPSIETLVLPFPSHPSIPSGVENVKDLPPSGFPLMIHALGELYAPLLSWFRSHPSP 114 (477)
T ss_pred hCCCEEEEEeCCCcHHHHhhhcccCCCeeEEeCCCCCcCCCCCCCcChhhcchhhHHHHHHHHHHhHHHHHHHHHhCCCC
Confidence 47999999999999988765421124699999998888889888766655554555567777778888999999874 5
Q ss_pred CCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCC------CCC---CCCCCCCCccccccccccc
Q 038300 79 PDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGD------AND---DDEEFPSSSIFIHDYYMKS 149 (401)
Q Consensus 79 pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~------~p~---~~~~~~~~~~~~~~~~~~~ 149 (401)
|+|||+|++++|+.++|+++|||+++|++++++.++.+++.....+... .++ ..++++.+...+++.++..
T Consensus 115 p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~ 194 (477)
T PLN02863 115 PVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTKINPDDQNEILSFSKIPNCPKYPWWQISSLYRS 194 (477)
T ss_pred CeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhcccccccccccccccccCCCCCCCCcChHhCchhhhc
Confidence 7999999999999999999999999999999999887766532111000 011 1122333333444443321
Q ss_pred cCCCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcC-CCeeeecccCCCCC-C-------C--CcccchH
Q 038300 150 YFSNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIK-KKVVPVGPLVQDPV-E-------Q--TDHEKGA 218 (401)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~-~~v~~vGPl~~~~~-~-------~--~~~~~~~ 218 (401)
..........+.+....... ++++|+|||.+||++++++++..++ +++++||||..... . . ...+++|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~-~~~vlvNTf~eLE~~~~~~~~~~~~~~~v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~ 273 (477)
T PLN02863 195 YVEGDPAWEFIKDSFRANIA-SWGLVVNSFTELEGIYLEHLKKELGHDRVWAVGPILPLSGEKSGLMERGGPSSVSVDDV 273 (477)
T ss_pred cCccchHHHHHHHHHhhhcc-CCEEEEecHHHHHHHHHHHHHhhcCCCCeEEeCCCcccccccccccccCCcccccHHHH
Confidence 11110001122222222334 7889999999999999999988764 58999999964320 0 0 0012459
Q ss_pred hhhhh--------------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCc
Q 038300 219 TEIIH--------------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAP 284 (401)
Q Consensus 219 ~~~l~--------------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 284 (401)
.+||| ...++.+++.+++.+|+.++++|||+++...... .....+|++|.+++.++|+++.+|+|
T Consensus 274 ~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~-~~~~~lp~~~~~r~~~~g~~v~~w~P 352 (477)
T PLN02863 274 MTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEE-SDYSNIPSGFEDRVAGRGLVIRGWAP 352 (477)
T ss_pred HHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcccc-cchhhCCHHHHHHhccCCEEecCCCC
Confidence 99999 4467789999999999999999999998532211 01235899999999999999999999
Q ss_pred hhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHh-hCeeeeeeccCCCCCCHHHHHHHHHHHhc
Q 038300 285 QMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVED-VGIGLEVRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 285 ~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~-~g~g~~l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
|.+||+|+++++|||||||||++||+++|||+|++|++.||+.||+++++ .|+|+.+.++....++.+++.++|+++|.
T Consensus 353 Q~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~ 432 (477)
T PLN02863 353 QVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSDELARVFMESVS 432 (477)
T ss_pred HHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999876 59999994322245689999999999994
Q ss_pred CcccHHHHHHHHHHHHHHHh----hc--HHHHHHHHHHHHhh
Q 038300 364 EREGEKIKRKTREMGEKIKE----KG--EEEIEWVADELIHL 399 (401)
Q Consensus 364 ~~~~~~~~~~a~~~~~~~~~----~~--~~~~~~~v~~~~~~ 399 (401)
+ +++||+||+++++.+++ +| .++++++|+++..+
T Consensus 433 ~--~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~ 472 (477)
T PLN02863 433 E--NQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVEL 472 (477)
T ss_pred c--cHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHh
Confidence 2 79999999999999776 46 78999999998654
No 6
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=2.5e-56 Score=428.29 Aligned_cols=386 Identities=26% Similarity=0.416 Sum_probs=287.4
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhc--C
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNL--S 78 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~ 78 (401)
++|++|||++|+.+.+++.+.....++++++.+|+|+.+++|... .+....+..+...+.+.+++++++. +
T Consensus 32 ~~g~~vT~v~t~~n~~~~~~~~~~~~~i~~~~lp~p~~~glp~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (481)
T PLN02992 32 NHGFHVTVFVLETDAASAQSKFLNSTGVDIVGLPSPDISGLVDPS-------AHVVTKIGVIMREAVPTLRSKIAEMHQK 104 (481)
T ss_pred CCCcEEEEEeCCCchhhhhhccccCCCceEEECCCccccCCCCCC-------ccHHHHHHHHHHHhHHHHHHHHHhcCCC
Confidence 379999999999987766443211236999999877766765221 1122334455556788999999875 6
Q ss_pred CCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcc--cCCC-C--C--CCCCCCCCCCCccccccccc-ccc
Q 038300 79 PDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIK--KNSL-G--D--ANDDDEEFPSSSIFIHDYYM-KSY 150 (401)
Q Consensus 79 pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~--~~~~-~--~--~p~~~~~~~~~~~~~~~~~~-~~~ 150 (401)
|+|||+|++++|+.++|+++|||+++|++++++..+.+.+... .... . . .++..++++.+...+++..+ .+.
T Consensus 105 p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~~ 184 (481)
T PLN02992 105 PTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKEEHTVQRKPLAMPGCEPVRFEDTLDAYLVPD 184 (481)
T ss_pred CeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhccccccccccCCCCcccCCCCccCHHHhhHhhcCCC
Confidence 8999999999999999999999999999999988765543321 1100 0 0 02222233333333344212 211
Q ss_pred CCCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhh--c----CCCeeeecccCCCCCCCCcccchHhhhhh-
Q 038300 151 FSNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDL--I----KKKVVPVGPLVQDPVEQTDHEKGATEIIH- 223 (401)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~--~----~~~v~~vGPl~~~~~~~~~~~~~~~~~l~- 223 (401)
... ...+.+....+.+ ++++|+|||.+||++++++++.. + .+++++||||...... ..++++|.+|||
T Consensus 185 ~~~---~~~~~~~~~~~~~-a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~VGPl~~~~~~-~~~~~~c~~wLd~ 259 (481)
T PLN02992 185 EPV---YRDFVRHGLAYPK-ADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPIGPLCRPIQS-SKTDHPVLDWLNK 259 (481)
T ss_pred cHH---HHHHHHHHHhccc-CCEEEEechHHHhHHHHHHHhhccccccccCCceEEecCccCCcCC-CcchHHHHHHHHc
Confidence 110 2223333444556 89999999999999999988652 1 2579999999754211 112344999999
Q ss_pred -------------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCC--------------CcccccCchhHHHhhcCCc
Q 038300 224 -------------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAK--------------VKVDEELPESFLERTKERA 276 (401)
Q Consensus 224 -------------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~ 276 (401)
...++.+++++++.+|+.++++|||++++..... ......+|++|.+|++++|
T Consensus 260 ~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg 339 (481)
T PLN02992 260 QPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRG 339 (481)
T ss_pred CCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccccCcccccccchhhhCCHHHHHHhcCCC
Confidence 5678899999999999999999999998531100 0112358999999999999
Q ss_pred eEEcccCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHH-hhCeeeeeeccCCCCCCHHHHH
Q 038300 277 MVIEGWAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVE-DVGIGLEVRRNKCGRIQREEMA 355 (401)
Q Consensus 277 ~~~~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~-~~g~g~~l~~~~~~~~~~~~l~ 355 (401)
+++.+|+||.+||+|+++|+|||||||||++|++++|||||+||+++||+.||++++ +.|+|+.+++ ..+.++.++|+
T Consensus 340 ~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~-~~~~~~~~~l~ 418 (481)
T PLN02992 340 FVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDD-PKEVISRSKIE 418 (481)
T ss_pred EEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecC-CCCcccHHHHH
Confidence 999999999999999999999999999999999999999999999999999999996 6799999943 12468999999
Q ss_pred HHHHHHhcCcccHHHHHHHHHHHHHHHh------hc--HHHHHHHHHHHHhh
Q 038300 356 RVIKEVVMEREGEKIKRKTREMGEKIKE------KG--EEEIEWVADELIHL 399 (401)
Q Consensus 356 ~~i~~~l~~~~~~~~~~~a~~~~~~~~~------~~--~~~~~~~v~~~~~~ 399 (401)
++|+++|.+++++.+|++++++++.+++ +| .++++++|+++.+.
T Consensus 419 ~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~~~ 470 (481)
T PLN02992 419 ALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQRF 470 (481)
T ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHH
Confidence 9999999876778999999999998874 34 67899999888654
No 7
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=3.2e-56 Score=429.15 Aligned_cols=394 Identities=26% Similarity=0.414 Sum_probs=290.8
Q ss_pred CCCeEEEEEeCCccchhhhcccc----CCCCeEEEEecCCCC-CCCCCCCCCCCCCCC-CchHHHHHHHhhchHHHHHHH
Q 038300 1 GSNFHICFCSTPSILNSIKQLDK----FSLSIQLIELHLPSL-PELPPQYHTTKGLPP-HLMPTLKEAFDMASPSFFNIL 74 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~----~~~gi~f~~i~~~~~-~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l 74 (401)
++|+.|||++|+.+..++..... .+..|+|+.+|+|.. |++|++.+...+.+. .+...+......+.+.++++|
T Consensus 34 ~~G~~vT~v~t~~n~~~~~~~~~~~~~~~~~i~~~~lp~p~~~dglp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lL 113 (491)
T PLN02534 34 ERGVIVSLVTTPQNASRFAKTIDRARESGLPIRLVQIPFPCKEVGLPIGCENLDTLPSRDLLRKFYDAVDKLQQPLERFL 113 (491)
T ss_pred hCCCeEEEEECCCcHHHHhhhhhhccccCCCeEEEEcCCCCccCCCCCCccccccCCcHHHHHHHHHHHHHhHHHHHHHH
Confidence 47999999999999877665321 112499999998865 589877655444433 344455566667888999999
Q ss_pred hhc--CCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcc----c-CCCCCCCCCCCCCCC---Ccccccc
Q 038300 75 KNL--SPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIK----K-NSLGDANDDDEEFPS---SSIFIHD 144 (401)
Q Consensus 75 ~~~--~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~----~-~~~~~~p~~~~~~~~---~~~~~~~ 144 (401)
++. +|+|||+|++++|+.++|+++|||.++|++++++....++.... . .+....|+..++++. +...+++
T Consensus 114 ~~~~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~p~~~~l~~~dlp 193 (491)
T PLN02534 114 EQAKPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHNAHLSVSSDSEPFVVPGMPQSIEITRAQLP 193 (491)
T ss_pred HhcCCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHhcccccCCCCCceeecCCCCccccccHHHCC
Confidence 863 57999999999999999999999999999999887765432211 0 111111222233321 2222243
Q ss_pred ccccccCCCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCC--C------CCCc--c
Q 038300 145 YYMKSYFSNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDP--V------EQTD--H 214 (401)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~--~------~~~~--~ 214 (401)
..+... .. .......+ ......++++|+|||.+||+.++++++..+++++++||||.... . .... +
T Consensus 194 ~~~~~~-~~--~~~~~~~~-~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL~~~~~~~~~~~~~~~~~~~~ 269 (491)
T PLN02534 194 GAFVSL-PD--LDDVRNKM-REAESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLCNKRNLDKFERGNKASID 269 (491)
T ss_pred hhhcCc-cc--HHHHHHHH-HhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECcccccccccccccccCCccccc
Confidence 322110 01 01122222 22222277999999999999999999877767899999996421 0 1001 1
Q ss_pred cchHhhhhh--------------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEc
Q 038300 215 EKGATEIIH--------------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIE 280 (401)
Q Consensus 215 ~~~~~~~l~--------------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (401)
+++|.+||| ...+.++++.+++.+|+.++.+|||+++.+..........+|++|.+++.++|+++.
T Consensus 270 ~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~ 349 (491)
T PLN02534 270 ETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIK 349 (491)
T ss_pred hHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccchhhhcCchhhHHhhccCCeecc
Confidence 245999999 456889999999999999999999999853111111112368999999889999999
Q ss_pred ccCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhh-Ceeeeeecc------CC---C-CC
Q 038300 281 GWAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDV-GIGLEVRRN------KC---G-RI 349 (401)
Q Consensus 281 ~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~-g~g~~l~~~------~~---~-~~ 349 (401)
+|+||.+||+|+++++|||||||||++||+++|||+|++|++.||+.||+++++. |+|+.+... .. + .+
T Consensus 350 ~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v 429 (491)
T PLN02534 350 GWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLV 429 (491)
T ss_pred CCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccccccccccCcc
Confidence 9999999999999999999999999999999999999999999999999999875 999987311 01 1 48
Q ss_pred CHHHHHHHHHHHhc--CcccHHHHHHHHHHHHHHHh----hc--HHHHHHHHHHHHh
Q 038300 350 QREEMARVIKEVVM--EREGEKIKRKTREMGEKIKE----KG--EEEIEWVADELIH 398 (401)
Q Consensus 350 ~~~~l~~~i~~~l~--~~~~~~~~~~a~~~~~~~~~----~~--~~~~~~~v~~~~~ 398 (401)
++|+|.++|+++|. +++++++|+||+++++.+++ +| .++++++|+++.+
T Consensus 430 ~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~~ 486 (491)
T PLN02534 430 KKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQDVLK 486 (491)
T ss_pred CHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 99999999999997 45688999999999999887 45 7899999999864
No 8
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=3.4e-55 Score=420.05 Aligned_cols=378 Identities=26% Similarity=0.382 Sum_probs=274.9
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhc---
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNL--- 77 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--- 77 (401)
+||+.|||++|+.+..+... ...+++|..+| +|+|++.... . .....+......+.+.++++|++.
T Consensus 33 ~~G~~VT~v~T~~n~~~~~~---~~~~i~~~~ip----~glp~~~~~~--~--~~~~~~~~~~~~~~~~~~~~L~~l~~~ 101 (451)
T PLN02410 33 LKGFSITIAQTKFNYFSPSD---DFTDFQFVTIP----ESLPESDFKN--L--GPIEFLHKLNKECQVSFKDCLGQLVLQ 101 (451)
T ss_pred cCCCEEEEEeCccccccccc---CCCCeEEEeCC----CCCCcccccc--c--CHHHHHHHHHHHhHHHHHHHHHHHHhc
Confidence 47999999999988632111 11368898886 5777532111 1 122333444445667777777653
Q ss_pred ---CCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhccc------CC-CC---CCCCCCCCCCCCcccccc
Q 038300 78 ---SPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKK------NS-LG---DANDDDEEFPSSSIFIHD 144 (401)
Q Consensus 78 ---~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~------~~-~~---~~p~~~~~~~~~~~~~~~ 144 (401)
+++|||+|++++|+.++|+++|||++.|++++++.++.+.++... .+ .. -.+...++++.+...+++
T Consensus 102 ~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~~~~~dlp 181 (451)
T PLN02410 102 QGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPLKEPKGQQNELVPEFHPLRCKDFP 181 (451)
T ss_pred cCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCCCCccccccCccccCCCCCCCChHHCc
Confidence 469999999999999999999999999999999887765543210 01 00 001111222222222233
Q ss_pred ccccccCCCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCC--CCC-CcccchHhhh
Q 038300 145 YYMKSYFSNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDP--VEQ-TDHEKGATEI 221 (401)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~--~~~-~~~~~~~~~~ 221 (401)
......... + ...+... ..+.+ ++++++|||.+||+++++++++..++++++|||+.... ... ..+.++|.+|
T Consensus 182 ~~~~~~~~~-~-~~~~~~~-~~~~~-~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~w 257 (451)
T PLN02410 182 VSHWASLES-I-MELYRNT-VDKRT-ASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVASAPTSLLEENKSCIEW 257 (451)
T ss_pred chhcCCcHH-H-HHHHHHH-hhccc-CCEEEEeChHHhhHHHHHHHHhccCCCEEEecccccccCCCccccccchHHHHH
Confidence 221100000 0 1111111 12345 88999999999999999999887767899999996432 111 1122359999
Q ss_pred hh--------------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhh
Q 038300 222 IH--------------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMK 287 (401)
Q Consensus 222 l~--------------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 287 (401)
|| ...++.+++.+++.+|+.++++|||+++.......+....+|++|.+|+.++++++ +|+||.+
T Consensus 258 Ld~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~-~w~PQ~~ 336 (451)
T PLN02410 258 LNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIV-KWAPQKE 336 (451)
T ss_pred HHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHHHhccCCeEEE-ccCCHHH
Confidence 99 45678999999999999999999999985321111112348999999998777554 8999999
Q ss_pred hcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhh-CeeeeeeccCCCCCCHHHHHHHHHHHhcCcc
Q 038300 288 ILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDV-GIGLEVRRNKCGRIQREEMARVIKEVVMERE 366 (401)
Q Consensus 288 ~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~-g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~ 366 (401)
||+|+++++|||||||||++||+++|||||++|++.||+.||+++++. |+|+.+ . ..+++++|+++|+++|.+++
T Consensus 337 iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~---~-~~~~~~~v~~av~~lm~~~~ 412 (451)
T PLN02410 337 VLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQV---E-GDLDRGAVERAVKRLMVEEE 412 (451)
T ss_pred HhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEe---C-CcccHHHHHHHHHHHHcCCc
Confidence 999999999999999999999999999999999999999999999987 999999 3 57899999999999998766
Q ss_pred cHHHHHHHHHHHHHHHh----hc--HHHHHHHHHHHHh
Q 038300 367 GEKIKRKTREMGEKIKE----KG--EEEIEWVADELIH 398 (401)
Q Consensus 367 ~~~~~~~a~~~~~~~~~----~~--~~~~~~~v~~~~~ 398 (401)
+++||++|+++++.+++ +| .++++++|+++..
T Consensus 413 ~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~~ 450 (451)
T PLN02410 413 GEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMRT 450 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 78999999999999985 45 7899999999865
No 9
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=6.7e-55 Score=416.17 Aligned_cols=374 Identities=26% Similarity=0.454 Sum_probs=279.4
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCC-CCCCCCCCCCchHHHHHHHhhchHHHHHHHhhc--
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQ-YHTTKGLPPHLMPTLKEAFDMASPSFFNILKNL-- 77 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-- 77 (401)
++|++|||++|+.+..++... .+++|+|+.+| +|+|++ .+.. .+....+......+.++++++|++.
T Consensus 31 ~~G~~vT~v~t~~~~~~~~~~--~~~~i~~~~ip----dglp~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~ 100 (449)
T PLN02173 31 SKGFKTTHTLTTFIFNTIHLD--PSSPISIATIS----DGYDQGGFSSA----GSVPEYLQNFKTFGSKTVADIIRKHQS 100 (449)
T ss_pred cCCCEEEEEECCchhhhcccC--CCCCEEEEEcC----CCCCCcccccc----cCHHHHHHHHHHhhhHHHHHHHHHhhc
Confidence 479999999999987665432 12369999986 688763 2322 1233444445556788999998864
Q ss_pred --CC-CEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCCCCCCCCCCCCCccccccccccccCCCC
Q 038300 78 --SP-DLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDEEFPSSSIFIHDYYMKSYFSNM 154 (401)
Q Consensus 78 --~p-D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (401)
+| +|||+|++++|+.++|+++|||++.|++++++....+++...... .. ++..++++.++..+++.++.......
T Consensus 101 ~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~~~~~~-~~-~~~~pg~p~l~~~dlp~~~~~~~~~~ 178 (449)
T PLN02173 101 TDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYLSYINNG-SL-TLPIKDLPLLELQDLPTFVTPTGSHL 178 (449)
T ss_pred cCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHhHHhccC-Cc-cCCCCCCCCCChhhCChhhcCCCCch
Confidence 46 999999999999999999999999999998877665543211111 11 22233444444445555443111110
Q ss_pred CCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCC--------C-CCCC------cccchHh
Q 038300 155 VESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQD--------P-VEQT------DHEKGAT 219 (401)
Q Consensus 155 ~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~--------~-~~~~------~~~~~~~ 219 (401)
.....+.+..+.+.+ ++++|+|||.+||++++++++.. .+++.|||+.+. . .+.. +++++|.
T Consensus 179 ~~~~~~~~~~~~~~~-~~~vlvNTf~eLE~~~~~~~~~~--~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 255 (449)
T PLN02173 179 AYFEMVLQQFTNFDK-ADFVLVNSFHDLDLHENELLSKV--CPVLTIGPTVPSMYLDQQIKSDNDYDLNLFDLKEAALCT 255 (449)
T ss_pred HHHHHHHHHHhhhcc-CCEEEEeCHHHhhHHHHHHHHhc--CCeeEEcccCchhhccccccccccccccccccccchHHH
Confidence 001222233344556 89999999999999999998754 379999999632 0 1100 1123499
Q ss_pred hhhh--------------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCch
Q 038300 220 EIIH--------------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQ 285 (401)
Q Consensus 220 ~~l~--------------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 285 (401)
+||| ...++.+++.+++.+| ++.+|+|+++... ...+|++|.+++.+.|+++.+|+||
T Consensus 256 ~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~~------~~~lp~~~~~~~~~~~~~i~~W~PQ 327 (449)
T PLN02173 256 DWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRASE------ESKLPPGFLETVDKDKSLVLKWSPQ 327 (449)
T ss_pred HHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEeccc------hhcccchHHHhhcCCceEEeCCCCH
Confidence 9999 4567899999999999 8899999998531 1247889998887788888899999
Q ss_pred hhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhh-CeeeeeeccCC-CCCCHHHHHHHHHHHhc
Q 038300 286 MKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDV-GIGLEVRRNKC-GRIQREEMARVIKEVVM 363 (401)
Q Consensus 286 ~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~-g~g~~l~~~~~-~~~~~~~l~~~i~~~l~ 363 (401)
.+||+|+++++|||||||||++|++++|||||+||+++||+.||+++++. |+|+.+..++. ..++.|+|+++|+++|.
T Consensus 328 ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~ 407 (449)
T PLN02173 328 LQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVME 407 (449)
T ss_pred HHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999987 99988843221 34799999999999998
Q ss_pred CcccHHHHHHHHHHHHHHHh----hc--HHHHHHHHHHHH
Q 038300 364 EREGEKIKRKTREMGEKIKE----KG--EEEIEWVADELI 397 (401)
Q Consensus 364 ~~~~~~~~~~a~~~~~~~~~----~~--~~~~~~~v~~~~ 397 (401)
+++++.+|++|+++++.+++ +| .++++++|+++.
T Consensus 408 ~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 408 GEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred CChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 76678999999999999984 55 778999998873
No 10
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=4.5e-54 Score=410.37 Aligned_cols=383 Identities=27% Similarity=0.403 Sum_probs=282.2
Q ss_pred CCeEEEEEeCCccchhhh--ccc-cC--CCCeEEEEecCCCCCCCC-CCCCCCCCCCCCchHHHHHHHhhchHHHHHHHh
Q 038300 2 SNFHICFCSTPSILNSIK--QLD-KF--SLSIQLIELHLPSLPELP-PQYHTTKGLPPHLMPTLKEAFDMASPSFFNILK 75 (401)
Q Consensus 2 rG~~Vt~~~~~~~~~~i~--~~~-~~--~~gi~f~~i~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 75 (401)
+|..|||++++.+..++. ... .. .++|+|+.+|++..++++ .+ .+....+..+...+.++++++|+
T Consensus 31 ~g~~vT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~l~~~~--------~~~~~~~~~~~~~~~~~~~~~l~ 102 (470)
T PLN03015 31 LNIHVTILAVTSGSSSPTETEAIHAAAARTTCQITEIPSVDVDNLVEPD--------ATIFTKMVVKMRAMKPAVRDAVK 102 (470)
T ss_pred CCCeEEEEECCCchhhhccccccccccCCCceEEEECCCCccccCCCCC--------ccHHHHHHHHHHhchHHHHHHHH
Confidence 389999999888765542 111 11 136999999866544542 11 12333466677778999999999
Q ss_pred hc--CCCEEEEcCCCCcHHHHHHhcCCC-eEEEeccchHHHHHhhhhcc--cC-CC---CC-CCCCCCCCCCCccccccc
Q 038300 76 NL--SPDLLIYDLIQPWAPALASSLNIP-AVYFLVSSAATSAFMFHAIK--KN-SL---GD-ANDDDEEFPSSSIFIHDY 145 (401)
Q Consensus 76 ~~--~pD~vI~D~~~~~~~~~A~~lgIP-~v~~~~~~~~~~~~~~~~~~--~~-~~---~~-~p~~~~~~~~~~~~~~~~ 145 (401)
+. +++|||+|.+++|+.++|+++||| .++|++++++....+++... .. .. .. .++..++++.+...+++.
T Consensus 103 ~l~~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~vPg~p~l~~~dlp~ 182 (470)
T PLN03015 103 SMKRKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDTVVEGEYVDIKEPLKIPGCKPVGPKELME 182 (470)
T ss_pred hcCCCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhcccccccCCCCCeeeCCCCCCCChHHCCH
Confidence 76 679999999999999999999999 68888888877755544321 10 11 00 122233344444444553
Q ss_pred cccccCCCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhc------CCCeeeecccCCCCCCCCcccchHh
Q 038300 146 YMKSYFSNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLI------KKKVVPVGPLVQDPVEQTDHEKGAT 219 (401)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~------~~~v~~vGPl~~~~~~~~~~~~~~~ 219 (401)
.+...... ...... +..+.+.+ ++++|+|||.+||+.+++++++.+ .+++++|||+...... ..++++|.
T Consensus 183 ~~~~~~~~-~~~~~~-~~~~~~~~-a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v~~VGPl~~~~~~-~~~~~~~~ 258 (470)
T PLN03015 183 TMLDRSDQ-QYKECV-RSGLEVPM-SDGVLVNTWEELQGNTLAALREDMELNRVMKVPVYPIGPIVRTNVH-VEKRNSIF 258 (470)
T ss_pred hhcCCCcH-HHHHHH-HHHHhccc-CCEEEEechHHHhHHHHHHHHhhcccccccCCceEEecCCCCCccc-ccchHHHH
Confidence 33211110 001122 22334566 999999999999999999997752 2469999999753211 11123599
Q ss_pred hhhh--------------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCC-------CCCcccccCchhHHHhhcCCceE
Q 038300 220 EIIH--------------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCG-------AKVKVDEELPESFLERTKERAMV 278 (401)
Q Consensus 220 ~~l~--------------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 278 (401)
+||| ...++.+++.+++.+|+.++++|||+++.... ...+....+|++|.+|+.+++++
T Consensus 259 ~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~ 338 (470)
T PLN03015 259 EWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLV 338 (470)
T ss_pred HHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCccccccccccccchhhcCChHHHHhhccCceE
Confidence 9999 56789999999999999999999999985321 00112235899999999999999
Q ss_pred EcccCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHh-hCeeeeeecc-CCCCCCHHHHHH
Q 038300 279 IEGWAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVED-VGIGLEVRRN-KCGRIQREEMAR 356 (401)
Q Consensus 279 ~~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~-~g~g~~l~~~-~~~~~~~~~l~~ 356 (401)
+.+|+||.+||+|+++|+|||||||||++|++++|||||+||+++||+.||+++++ .|+|+.+.+. ..+.+++|+|++
T Consensus 339 v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~ 418 (470)
T PLN03015 339 VTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVAS 418 (470)
T ss_pred EEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999965 5999999421 124689999999
Q ss_pred HHHHHhcC--cccHHHHHHHHHHHHHHHh----hc--HHHHHHHHHHH
Q 038300 357 VIKEVVME--REGEKIKRKTREMGEKIKE----KG--EEEIEWVADEL 396 (401)
Q Consensus 357 ~i~~~l~~--~~~~~~~~~a~~~~~~~~~----~~--~~~~~~~v~~~ 396 (401)
+|+++|.+ ++++++|+||+++++++++ +| .+++++++.++
T Consensus 419 ~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~~~~ 466 (470)
T PLN03015 419 LVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWAKRC 466 (470)
T ss_pred HHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhc
Confidence 99999962 5689999999999999887 45 77899988776
No 11
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=7.5e-54 Score=412.24 Aligned_cols=386 Identities=26% Similarity=0.415 Sum_probs=279.5
Q ss_pred CCCeEEEEEeCCccchhhhccc---c---CCCC---eEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHH
Q 038300 1 GSNFHICFCSTPSILNSIKQLD---K---FSLS---IQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFF 71 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~---~---~~~g---i~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 71 (401)
++|+.|||++|+.+..++.+.. . .+.+ ++|..+ | +|+|.+.+.. .++...+......+.+.++
T Consensus 33 ~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~--p--dglp~~~~~~----~~~~~~~~~~~~~~~~~l~ 104 (480)
T PLN02555 33 SKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFF--E--DGWAEDDPRR----QDLDLYLPQLELVGKREIP 104 (480)
T ss_pred hCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeC--C--CCCCCCcccc----cCHHHHHHHHHHhhhHHHH
Confidence 4799999999999887765311 0 1112 444444 3 5787654321 2333334444445678888
Q ss_pred HHHhhc----CC-CEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhccc--CCCC----CCCCCCCCCCCCcc
Q 038300 72 NILKNL----SP-DLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKK--NSLG----DANDDDEEFPSSSI 140 (401)
Q Consensus 72 ~~l~~~----~p-D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~--~~~~----~~p~~~~~~~~~~~ 140 (401)
++|++. +| +|||+|++++|+.++|+++|||.++|++++++.++.+++.... +... ..++..++++.+..
T Consensus 105 ~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~iPglp~l~~ 184 (480)
T PLN02555 105 NLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYHGLVPFPTETEPEIDVQLPCMPLLKY 184 (480)
T ss_pred HHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHhhcCCCcccccCCCceeecCCCCCcCH
Confidence 888753 44 9999999999999999999999999999999888876554221 1010 01222344444444
Q ss_pred ccccccccccCCCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCC--C-C---C--C
Q 038300 141 FIHDYYMKSYFSNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDP--V-E---Q--T 212 (401)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~--~-~---~--~ 212 (401)
.+++.++............+.+..+.+.+ ++++|+|||.+||+.++++++... +++.|||+.... . . . .
T Consensus 185 ~dlp~~~~~~~~~~~~~~~~~~~~~~~~~-a~~vlvNTf~eLE~~~~~~l~~~~--~v~~iGPl~~~~~~~~~~~~~~~~ 261 (480)
T PLN02555 185 DEIPSFLHPSSPYPFLRRAILGQYKNLDK-PFCILIDTFQELEKEIIDYMSKLC--PIKPVGPLFKMAKTPNSDVKGDIS 261 (480)
T ss_pred hhCcccccCCCCchHHHHHHHHHHHhccc-CCEEEEEchHHHhHHHHHHHhhCC--CEEEeCcccCcccccccccccccc
Confidence 55555443111110001112223344455 889999999999999999887644 499999996431 1 1 1 1
Q ss_pred cccchHhhhhh--------------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceE
Q 038300 213 DHEKGATEIIH--------------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMV 278 (401)
Q Consensus 213 ~~~~~~~~~l~--------------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (401)
..+++|.+||| ...++.+++.+++.+|+.++++|||+++...+........+|+++.+++.+++ .
T Consensus 262 ~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~g-~ 340 (480)
T PLN02555 262 KPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLEKAGDKG-K 340 (480)
T ss_pred ccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhcCChhhhhhcCCce-E
Confidence 12245999999 35678999999999999999999999985311111112357888988876655 5
Q ss_pred EcccCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhh-CeeeeeeccC--CCCCCHHHHH
Q 038300 279 IEGWAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDV-GIGLEVRRNK--CGRIQREEMA 355 (401)
Q Consensus 279 ~~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~-g~g~~l~~~~--~~~~~~~~l~ 355 (401)
+.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++. |+|+.+.+.. ...++.++|.
T Consensus 341 v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v~~~~v~ 420 (480)
T PLN02555 341 IVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKLITREEVA 420 (480)
T ss_pred EEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccccCcCcHHHHH
Confidence 568999999999999999999999999999999999999999999999999999997 9999994311 2468999999
Q ss_pred HHHHHHhcCcccHHHHHHHHHHHHHHHh----hc--HHHHHHHHHHHHh
Q 038300 356 RVIKEVVMEREGEKIKRKTREMGEKIKE----KG--EEEIEWVADELIH 398 (401)
Q Consensus 356 ~~i~~~l~~~~~~~~~~~a~~~~~~~~~----~~--~~~~~~~v~~~~~ 398 (401)
++|+++|.+++++++|+||++|++++++ +| .++++++|+++.+
T Consensus 421 ~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~ 469 (480)
T PLN02555 421 ECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVR 469 (480)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Confidence 9999999877789999999999999876 45 7799999999865
No 12
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=1.5e-53 Score=410.21 Aligned_cols=376 Identities=26% Similarity=0.444 Sum_probs=272.7
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhcCCC
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNLSPD 80 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD 80 (401)
+||++|||++|+.++++++........+++..+| +|+|.+.. ......+......+.+.+++++++.+||
T Consensus 36 ~~G~~VT~v~t~~~~~~~~~~~~~~~~~~~~~~~----~glp~~~~------~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 105 (456)
T PLN02210 36 SKNLHFTLATTEQARDLLSTVEKPRRPVDLVFFS----DGLPKDDP------RAPETLLKSLNKVGAKNLSKIIEEKRYS 105 (456)
T ss_pred cCCcEEEEEeccchhhhhccccCCCCceEEEECC----CCCCCCcc------cCHHHHHHHHHHhhhHHHHHHHhcCCCc
Confidence 4799999999999987764431111245555553 57775532 1222334444446678899999988999
Q ss_pred EEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcc--cCCCCC----CCCCCCCCCCCccccccccccccCCCC
Q 038300 81 LLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIK--KNSLGD----ANDDDEEFPSSSIFIHDYYMKSYFSNM 154 (401)
Q Consensus 81 ~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~--~~~~~~----~p~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (401)
|||+|.+++|+..+|+++|||.++|++.++..+..+.+... ...+.. .+...+.++.+....++.++.. ..+.
T Consensus 106 ~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~dl~~~~~~-~~~~ 184 (456)
T PLN02210 106 CIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKTNSFPDLEDLNQTVELPALPLLEVRDLPSFMLP-SGGA 184 (456)
T ss_pred EEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhccCCCCcccccCCeeeCCCCCCCChhhCChhhhc-CCch
Confidence 99999999999999999999999999999888776554321 000000 0111222333333334433321 1110
Q ss_pred CCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCC----C-CCC---------CcccchHhh
Q 038300 155 VESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQD----P-VEQ---------TDHEKGATE 220 (401)
Q Consensus 155 ~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~----~-~~~---------~~~~~~~~~ 220 (401)
.......++.+.... ++++++|||.+||+++++++++. +++++|||+... . ... ...+++|.+
T Consensus 185 ~~~~~~~~~~~~~~~-~~~vlvNTf~eLE~~~~~~l~~~--~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (456)
T PLN02210 185 HFNNLMAEFADCLRY-VKWVLVNSFYELESEIIESMADL--KPVIPIGPLVSPFLLGDDEEETLDGKNLDMCKSDDCCME 261 (456)
T ss_pred HHHHHHHHHHHhccc-CCEEEEeCHHHHhHHHHHHHhhc--CCEEEEcccCchhhcCcccccccccccccccccchHHHH
Confidence 001222233334445 88999999999999999998763 589999999741 1 100 012345999
Q ss_pred hhh--------------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhc-CCceEEcccCch
Q 038300 221 IIH--------------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTK-ERAMVIEGWAPQ 285 (401)
Q Consensus 221 ~l~--------------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~ 285 (401)
||| ....+.+++++++.+|+.++++|||+++.... ...++++.++.. +++ ++.+|+||
T Consensus 262 wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~------~~~~~~~~~~~~~~~g-~v~~w~PQ 334 (456)
T PLN02210 262 WLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEK------AQNVQVLQEMVKEGQG-VVLEWSPQ 334 (456)
T ss_pred HHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCcc------ccchhhHHhhccCCCe-EEEecCCH
Confidence 999 34568899999999999999999999985311 113455666663 555 45699999
Q ss_pred hhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHh-hCeeeeeeccC-CCCCCHHHHHHHHHHHhc
Q 038300 286 MKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVED-VGIGLEVRRNK-CGRIQREEMARVIKEVVM 363 (401)
Q Consensus 286 ~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~-~g~g~~l~~~~-~~~~~~~~l~~~i~~~l~ 363 (401)
.+||+|+++|+|||||||||++|++++|||+|+||++.||+.||+++++ .|+|+.+.+.+ .+.+++++|+++|+++|.
T Consensus 335 ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~ 414 (456)
T PLN02210 335 EKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEAVTE 414 (456)
T ss_pred HHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999998 79999995321 246899999999999998
Q ss_pred CcccHHHHHHHHHHHHHHHh----hc--HHHHHHHHHHHH
Q 038300 364 EREGEKIKRKTREMGEKIKE----KG--EEEIEWVADELI 397 (401)
Q Consensus 364 ~~~~~~~~~~a~~~~~~~~~----~~--~~~~~~~v~~~~ 397 (401)
+++++++|+||+++++.+++ +| .++++++|+++.
T Consensus 415 ~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 415 GPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDIT 454 (456)
T ss_pred CchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 76678999999999999887 45 778999999874
No 13
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=1.2e-53 Score=415.67 Aligned_cols=393 Identities=26% Similarity=0.399 Sum_probs=283.2
Q ss_pred CCCeEEEEEeCCccchhhhccc-c----CC-CCeEEEEecCCCC-CCCCCCCCCCCCCC-------CCchHHHHHHHhhc
Q 038300 1 GSNFHICFCSTPSILNSIKQLD-K----FS-LSIQLIELHLPSL-PELPPQYHTTKGLP-------PHLMPTLKEAFDMA 66 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~-~----~~-~gi~f~~i~~~~~-~~l~~~~~~~~~~~-------~~~~~~~~~~~~~~ 66 (401)
+||++|||++|+.+.+++++.. . .+ ..+++..+++|.. +++|.+.+.....+ ..+...+......+
T Consensus 31 ~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP~g~e~~~~~~~~~~~~~~~~~~~~~~~~~~l 110 (482)
T PLN03007 31 SRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLPEGCENVDFITSNNNDDSGDLFLKFLFSTKYF 110 (482)
T ss_pred hCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCCCCcccccccccccccchHHHHHHHHHHHHHH
Confidence 4899999999999987776542 1 11 1346666777765 37876654432111 12333344556678
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcc-cC----CCCCCCCCCCCCCC---C
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIK-KN----SLGDANDDDEEFPS---S 138 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~-~~----~~~~~p~~~~~~~~---~ 138 (401)
.+.+++++++.+|||||+|.+++|+..+|+++|||+|+|++++++.....+.... .+ +....++..++++. .
T Consensus 111 ~~~l~~~l~~~~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~p~~~~~ 190 (482)
T PLN03007 111 KDQLEKLLETTRPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASYCIRVHKPQKKVASSSEPFVIPDLPGDIVI 190 (482)
T ss_pred HHHHHHHHhcCCCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHHHHHHHhcccccccCCCCceeeCCCCCCcccc
Confidence 8899999988899999999999999999999999999999999877654432211 00 00000111122221 1
Q ss_pred ccccccccccccCCCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCC-C-------C
Q 038300 139 SIFIHDYYMKSYFSNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDP-V-------E 210 (401)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~-~-------~ 210 (401)
....++.. .........+....+.+.+ ++++++||+.+||+++.+++++..+.++++|||+.... . .
T Consensus 191 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VGPl~~~~~~~~~~~~~~ 265 (482)
T PLN03007 191 TEEQINDA----DEESPMGKFMKEVRESEVK-SFGVLVNSFYELESAYADFYKSFVAKRAWHIGPLSLYNRGFEEKAERG 265 (482)
T ss_pred CHHhcCCC----CCchhHHHHHHHHHhhccc-CCEEEEECHHHHHHHHHHHHHhccCCCEEEEccccccccccccccccC
Confidence 11111110 0000012233334444556 88999999999999989888876666899999985421 0 1
Q ss_pred --CCcccchHhhhhh--------------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcC
Q 038300 211 --QTDHEKGATEIIH--------------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKE 274 (401)
Q Consensus 211 --~~~~~~~~~~~l~--------------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (401)
...++++|.+||| ...++.+++.+++.+|+.++++|||+++...... .....+|++|.+|+.+
T Consensus 266 ~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~-~~~~~lp~~~~~r~~~ 344 (482)
T PLN03007 266 KKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQG-EKEEWLPEGFEERTKG 344 (482)
T ss_pred CccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEecCCccc-chhhcCCHHHHHHhcc
Confidence 0001245999998 3456788999999999999999999998642110 1123589999999999
Q ss_pred CceEEcccCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhh-Ceeeeeecc-----CCCC
Q 038300 275 RAMVIEGWAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDV-GIGLEVRRN-----KCGR 348 (401)
Q Consensus 275 ~~~~~~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~-g~g~~l~~~-----~~~~ 348 (401)
+|+++.+|+||.+||+|+++++|||||||||++||+++|||+|+||+++||+.||+++++. ++|+.+..+ +.+.
T Consensus 345 ~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~ 424 (482)
T PLN03007 345 KGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDF 424 (482)
T ss_pred CCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCc
Confidence 9999999999999999999999999999999999999999999999999999999998853 555544211 2346
Q ss_pred CCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHh----hc--HHHHHHHHHHHHhh
Q 038300 349 IQREEMARVIKEVVMEREGEKIKRKTREMGEKIKE----KG--EEEIEWVADELIHL 399 (401)
Q Consensus 349 ~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~----~~--~~~~~~~v~~~~~~ 399 (401)
+++++|+++|+++|.++++++||++|+++++.+++ +| .++++++|+++.++
T Consensus 425 ~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~~~~ 481 (482)
T PLN03007 425 ISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFMEELNSR 481 (482)
T ss_pred ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhc
Confidence 89999999999999866677999999999999987 45 78999999998653
No 14
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=2.2e-53 Score=405.94 Aligned_cols=368 Identities=24% Similarity=0.405 Sum_probs=265.9
Q ss_pred eEEEEEeCCccchhhhccc----cCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhc--
Q 038300 4 FHICFCSTPSILNSIKQLD----KFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNL-- 77 (401)
Q Consensus 4 ~~Vt~~~~~~~~~~i~~~~----~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-- 77 (401)
.+||+++++.+...+.+.. ...++++|+.+|++. +.+.+.. . .......+..+...+.+++.++|+++
T Consensus 36 vti~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~--~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 109 (451)
T PLN03004 36 IHIILVPPPYQPESTATYISSVSSSFPSITFHHLPAVT--PYSSSST--S--RHHHESLLLEILCFSNPSVHRTLFSLSR 109 (451)
T ss_pred EEEEEecCcchhhhhhhhhccccCCCCCeEEEEcCCCC--CCCCccc--c--ccCHHHHHHHHHHhhhHHHHHHHHhcCC
Confidence 5555566666443322111 112369999987331 1121111 1 12233445556667788888888875
Q ss_pred -C-CCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcc--cCC--C---CCCCCCCCCCCCCcccccccccc
Q 038300 78 -S-PDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIK--KNS--L---GDANDDDEEFPSSSIFIHDYYMK 148 (401)
Q Consensus 78 -~-pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~--~~~--~---~~~p~~~~~~~~~~~~~~~~~~~ 148 (401)
+ ++|||+|++++|+..+|+++|||.++|++++++.++.+.+... ... . ...+...++++.+...+++.+..
T Consensus 110 ~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~v~iPg~p~l~~~dlp~~~~ 189 (451)
T PLN03004 110 NFNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDETTPGKNLKDIPTVHIPGVPPMKGSDMPKAVL 189 (451)
T ss_pred CCCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhccccccccccccCCeecCCCCCCCChHHCchhhc
Confidence 3 4999999999999999999999999999999988887765321 110 0 01112223344444444554432
Q ss_pred ccCCCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcC-CCeeeecccCCCC--C-CCCcccchHhhhhh-
Q 038300 149 SYFSNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIK-KKVVPVGPLVQDP--V-EQTDHEKGATEIIH- 223 (401)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~-~~v~~vGPl~~~~--~-~~~~~~~~~~~~l~- 223 (401)
..... ....+.+....+.+ ++++|+|||.+||+.+++++++.+. +++++||||.... . ....++++|.+|||
T Consensus 190 ~~~~~--~~~~~~~~~~~~~~-~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~c~~wLd~ 266 (451)
T PLN03004 190 ERDDE--VYDVFIMFGKQLSK-SSGIIINTFDALENRAIKAITEELCFRNIYPIGPLIVNGRIEDRNDNKAVSCLNWLDS 266 (451)
T ss_pred CCchH--HHHHHHHHHHhhcc-cCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEeeeccCccccccccchhhHHHHHHHh
Confidence 11110 01233334445556 8899999999999999999977543 5899999997432 1 11112245999999
Q ss_pred -------------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCC---cccccCchhHHHhhcCCceEEcccCchhh
Q 038300 224 -------------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKV---KVDEELPESFLERTKERAMVIEGWAPQMK 287 (401)
Q Consensus 224 -------------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 287 (401)
...++.+++++++.+|+.++++|||+++....... .....+|++|.+|++++|+++.+|+||.+
T Consensus 267 ~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~ 346 (451)
T PLN03004 267 QPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVP 346 (451)
T ss_pred CCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHH
Confidence 45688999999999999999999999995321110 11224899999999999999999999999
Q ss_pred hcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHh-hCeeeeeeccCCCCCCHHHHHHHHHHHhcCcc
Q 038300 288 ILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVED-VGIGLEVRRNKCGRIQREEMARVIKEVVMERE 366 (401)
Q Consensus 288 ~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~-~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~ 366 (401)
||+|+++|+|||||||||++|++++|||+|++|++.||+.||+++++ .|+|+.+.+++.+.+++++|+++|+++|+
T Consensus 347 iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~--- 423 (451)
T PLN03004 347 VLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIG--- 423 (451)
T ss_pred HhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCccCHHHHHHHHHHHhc---
Confidence 99999999999999999999999999999999999999999999987 59999995321236799999999999998
Q ss_pred cHHHHHHHHHHHHHHHh
Q 038300 367 GEKIKRKTREMGEKIKE 383 (401)
Q Consensus 367 ~~~~~~~a~~~~~~~~~ 383 (401)
+++||++++++++.+++
T Consensus 424 ~~~~r~~a~~~~~~a~~ 440 (451)
T PLN03004 424 ECPVRERTMAMKNAAEL 440 (451)
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 78999999999998876
No 15
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=6.3e-53 Score=403.26 Aligned_cols=380 Identities=24% Similarity=0.424 Sum_probs=272.8
Q ss_pred CCeEEEEEeCCcc-chhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhc---
Q 038300 2 SNFHICFCSTPSI-LNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNL--- 77 (401)
Q Consensus 2 rG~~Vt~~~~~~~-~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--- 77 (401)
+|+.|||++|+.+ .+.+.......++++|+.++ ||+|.+.+... .+....+......+.+.+.+++++.
T Consensus 31 ~G~~vT~v~t~~~~~~~~~~~~~~~~~i~~~~i~----dglp~g~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 103 (455)
T PLN02152 31 TGTRVTFATCLSVIHRSMIPNHNNVENLSFLTFS----DGFDDGVISNT---DDVQNRLVNFERNGDKALSDFIEANLNG 103 (455)
T ss_pred CCcEEEEEeccchhhhhhhccCCCCCCEEEEEcC----CCCCCcccccc---ccHHHHHHHHHHhccHHHHHHHHHhhcc
Confidence 5999999999965 22221111111369999886 68876543211 2344455666667788888888864
Q ss_pred -CC-CEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q 038300 78 -SP-DLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDEEFPSSSIFIHDYYMKSYFSNMV 155 (401)
Q Consensus 78 -~p-D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (401)
+| +|||+|++++|+.++|+++|||.+.|++++++..+.+++....... ++..++++.+...+++.++.+......
T Consensus 104 ~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~---~~~iPglp~l~~~dlp~~~~~~~~~~~ 180 (455)
T PLN02152 104 DSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTGNNS---VFEFPNLPSLEIRDLPSFLSPSNTNKA 180 (455)
T ss_pred CCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhccCCC---eeecCCCCCCchHHCchhhcCCCCchh
Confidence 34 9999999999999999999999999999999988876654321111 122233343444445554432111100
Q ss_pred CchHHHHHHHHhhc-cccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCC-----C-CC----CcccchHhhhhh-
Q 038300 156 ESPTTKRLLQCFER-SCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDP-----V-EQ----TDHEKGATEIIH- 223 (401)
Q Consensus 156 ~~~~~~~~~~~~~~-~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~-----~-~~----~~~~~~~~~~l~- 223 (401)
....+.+..+.+.. .++++|+|||.+||+.++++++. .++++||||.... . +. .+++.+|.+|||
T Consensus 181 ~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~---~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~ 257 (455)
T PLN02152 181 AQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN---IEMVAVGPLLPAEIFTGSESGKDLSVRDQSSSYTLWLDS 257 (455)
T ss_pred HHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc---CCEEEEcccCccccccccccCccccccccchHHHHHhhC
Confidence 01223334443332 15699999999999999998865 2699999996421 1 11 011235999999
Q ss_pred -------------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCC----cc--cccCchhHHHhhcCCceEEcccCc
Q 038300 224 -------------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKV----KV--DEELPESFLERTKERAMVIEGWAP 284 (401)
Q Consensus 224 -------------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~p 284 (401)
...++.+++++++.+|+.++++|||+++....... .. ...+|++|.++..++++ +.+|+|
T Consensus 258 ~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~-v~~W~P 336 (455)
T PLN02152 258 KTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGM-IVSWCS 336 (455)
T ss_pred CCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCcccccccccccccccccchhHHHhccCCeE-EEeeCC
Confidence 45789999999999999999999999985321100 00 11357899888877765 458999
Q ss_pred hhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhh-CeeeeeeccCCCCCCHHHHHHHHHHHhc
Q 038300 285 QMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDV-GIGLEVRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 285 ~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~-g~g~~l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
|.+||+|+++|+|||||||||++|++++|||+|++|+++||+.||+++++. |+|+.+..+..+.++.|+|+++|+++|+
T Consensus 337 Q~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~e~l~~av~~vm~ 416 (455)
T PLN02152 337 QIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVERGEIRRCLEAVME 416 (455)
T ss_pred HHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999984 6666663322345699999999999996
Q ss_pred CcccHHHHHHHHHHHHHHHh----hc--HHHHHHHHHHH
Q 038300 364 EREGEKIKRKTREMGEKIKE----KG--EEEIEWVADEL 396 (401)
Q Consensus 364 ~~~~~~~~~~a~~~~~~~~~----~~--~~~~~~~v~~~ 396 (401)
+ ++..||+||+++++.+++ +| .++++++|+++
T Consensus 417 ~-~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i 454 (455)
T PLN02152 417 E-KSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454 (455)
T ss_pred h-hHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 3 356799999999998887 34 67899999876
No 16
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=2.1e-52 Score=404.87 Aligned_cols=382 Identities=25% Similarity=0.387 Sum_probs=278.8
Q ss_pred eEEEEEeCCccch----hhhccc----cCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHh
Q 038300 4 FHICFCSTPSILN----SIKQLD----KFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILK 75 (401)
Q Consensus 4 ~~Vt~~~~~~~~~----~i~~~~----~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 75 (401)
+.|||++++.+.. ++.+.. ..+.+++|+.+|++. +|.+.+ .....+......+.+.++++|+
T Consensus 36 ~~vT~~~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~---~p~~~e-------~~~~~~~~~~~~~~~~l~~~L~ 105 (480)
T PLN00164 36 LSLTVLVMPPPTPESASEVAAHVRREAASGLDIRFHHLPAVE---PPTDAA-------GVEEFISRYIQLHAPHVRAAIA 105 (480)
T ss_pred EEEEEEEcCCCccchhHHHHHHHhhcccCCCCEEEEECCCCC---CCCccc-------cHHHHHHHHHHhhhHHHHHHHH
Confidence 8999999887632 333221 011269999887331 232221 1223344466677889999998
Q ss_pred hc--CCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhccc--C-CCCC----CCCCCCCCCCCcccccccc
Q 038300 76 NL--SPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKK--N-SLGD----ANDDDEEFPSSSIFIHDYY 146 (401)
Q Consensus 76 ~~--~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~--~-~~~~----~p~~~~~~~~~~~~~~~~~ 146 (401)
+. +++|||+|++++|+.++|+++|||++.|++++++..+.+.+.... . +..+ .++..++++.+...+++..
T Consensus 106 ~l~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPGlp~l~~~dlp~~ 185 (480)
T PLN00164 106 GLSCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPALDEEVAVEFEEMEGAVDVPGLPPVPASSLPAP 185 (480)
T ss_pred hcCCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhhhhcccccCcccccCcceecCCCCCCChHHCCch
Confidence 76 459999999999999999999999999999999888876654321 1 0001 0112233333444445543
Q ss_pred ccccCCCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhc------CCCeeeecccCCCC-C-CCCcccchH
Q 038300 147 MKSYFSNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLI------KKKVVPVGPLVQDP-V-EQTDHEKGA 218 (401)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~------~~~v~~vGPl~~~~-~-~~~~~~~~~ 218 (401)
........ ...+....+.+.+ ++++|+|||.+||+.++++++... .++++.|||+.... . ....++++|
T Consensus 186 ~~~~~~~~--~~~~~~~~~~~~~-~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~ 262 (480)
T PLN00164 186 VMDKKSPN--YAWFVYHGRRFME-AAGIIVNTAAELEPGVLAAIADGRCTPGRPAPTVYPIGPVISLAFTPPAEQPPHEC 262 (480)
T ss_pred hcCCCcHH--HHHHHHHHHhhhh-cCEEEEechHHhhHHHHHHHHhccccccCCCCceEEeCCCccccccCCCccchHHH
Confidence 32111100 1222223344556 899999999999999999997642 14799999997421 1 111223459
Q ss_pred hhhhh--------------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCC------CcccccCchhHHHhhcCCceE
Q 038300 219 TEIIH--------------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAK------VKVDEELPESFLERTKERAMV 278 (401)
Q Consensus 219 ~~~l~--------------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 278 (401)
.+||| ...++.+++.+++.+|+.++++|||+++...... ......+|++|.+++.+++++
T Consensus 263 ~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~ 342 (480)
T PLN00164 263 VRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLV 342 (480)
T ss_pred HHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeE
Confidence 99998 3567889999999999999999999998542110 011234889999999999999
Q ss_pred EcccCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHh-hCeeeeeeccC--CCCCCHHHHH
Q 038300 279 IEGWAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVED-VGIGLEVRRNK--CGRIQREEMA 355 (401)
Q Consensus 279 ~~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~-~g~g~~l~~~~--~~~~~~~~l~ 355 (401)
+.+|+||.+||+|+++++|||||||||++|++++|||||+||+++||+.||+++++ .|+|+.+..++ .+.+++++|+
T Consensus 343 v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~ 422 (480)
T PLN00164 343 WPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELE 422 (480)
T ss_pred EeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999998876 59999984321 1347999999
Q ss_pred HHHHHHhcCc--ccHHHHHHHHHHHHHHHh----hc--HHHHHHHHHHHHh
Q 038300 356 RVIKEVVMER--EGEKIKRKTREMGEKIKE----KG--EEEIEWVADELIH 398 (401)
Q Consensus 356 ~~i~~~l~~~--~~~~~~~~a~~~~~~~~~----~~--~~~~~~~v~~~~~ 398 (401)
++|+++|.++ +++.+|++|+++++.+++ +| .++++++|+++.+
T Consensus 423 ~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~~v~~~~~ 473 (480)
T PLN00164 423 RAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQRLAREIRH 473 (480)
T ss_pred HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Confidence 9999999753 478999999999999987 45 7789999999864
No 17
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=3.4e-52 Score=400.47 Aligned_cols=369 Identities=20% Similarity=0.346 Sum_probs=269.1
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHh-hchHHHHHHHhhcC-
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFD-MASPSFFNILKNLS- 78 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~- 78 (401)
++|++|||+||+.+.+++.+.....++++|+.+| ++++.+. +.++. .+..++. .+.+.+++++++..
T Consensus 32 s~G~~VT~vtt~~~~~~~~~~~~~~~~i~~v~lp----~g~~~~~------~~~~~-~l~~a~~~~~~~~l~~ll~~l~~ 100 (448)
T PLN02562 32 SRGFEPVVITPEFIHRRISATLDPKLGITFMSIS----DGQDDDP------PRDFF-SIENSMENTMPPQLERLLHKLDE 100 (448)
T ss_pred hCCCEEEEEeCcchhhhhhhccCCCCCEEEEECC----CCCCCCc------cccHH-HHHHHHHHhchHHHHHHHHHhcC
Confidence 4799999999999987776542112379999886 4554221 12233 3344444 57889999998753
Q ss_pred ---CCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcc--cC----CCCC----CCC-CCCCCCCCcccccc
Q 038300 79 ---PDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIK--KN----SLGD----AND-DDEEFPSSSIFIHD 144 (401)
Q Consensus 79 ---pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~--~~----~~~~----~p~-~~~~~~~~~~~~~~ 144 (401)
++|||+|++++|+.++|+++|||+++|++++++..+.+++... .. ..+. .++ ..++++.+....++
T Consensus 101 ~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pg~~~l~~~dl~ 180 (448)
T PLN02562 101 DGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISETGCPRQLEKICVLPEQPLLSTEDLP 180 (448)
T ss_pred CCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhccccccccccccccccccCCCCCCCChhhCc
Confidence 3799999999999999999999999999998877776543321 00 0010 011 11223333333444
Q ss_pred ccccccCCCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhh----cCCCeeeecccCCCC-C---CCC--cc
Q 038300 145 YYMKSYFSNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDL----IKKKVVPVGPLVQDP-V---EQT--DH 214 (401)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~----~~~~v~~vGPl~~~~-~---~~~--~~ 214 (401)
.++............+.+..+...+ ++++++|||.+||+.+++.+... ..++++.|||+.... . ... +.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v~~iGpl~~~~~~~~~~~~~~~~ 259 (448)
T PLN02562 181 WLIGTPKARKARFKFWTRTLERTKS-LRWILMNSFKDEEYDDVKNHQASYNNGQNPQILQIGPLHNQEATTITKPSFWEE 259 (448)
T ss_pred chhcCCCcchHHHHHHHHHHhcccc-CCEEEEcChhhhCHHHHHHHHhhhccccCCCEEEecCcccccccccCCCccccc
Confidence 4332111010002223333444555 88999999999999888866532 235899999997542 1 111 22
Q ss_pred cchHhhhhh--------------Hh-CCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEE
Q 038300 215 EKGATEIIH--------------EY-FLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVI 279 (401)
Q Consensus 215 ~~~~~~~l~--------------~~-~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (401)
+.+|.+||| .. .++.+++++++.+|+.+|++|||+++... .+.+|++|.+++.+++ ++
T Consensus 260 ~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~~------~~~l~~~~~~~~~~~~-~v 332 (448)
T PLN02562 260 DMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPVW------REGLPPGYVERVSKQG-KV 332 (448)
T ss_pred hHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCCc------hhhCCHHHHHHhccCE-EE
Confidence 244889999 12 46889999999999999999999997521 1247888988876554 55
Q ss_pred cccCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhh-CeeeeeeccCCCCCCHHHHHHHH
Q 038300 280 EGWAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDV-GIGLEVRRNKCGRIQREEMARVI 358 (401)
Q Consensus 280 ~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~-g~g~~l~~~~~~~~~~~~l~~~i 358 (401)
.+|+||.+||+|+++++|||||||||++||+++|||+|++|+++||+.||+++++. |+|+.+ ..++.++|+++|
T Consensus 333 ~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~-----~~~~~~~l~~~v 407 (448)
T PLN02562 333 VSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRI-----SGFGQKEVEEGL 407 (448)
T ss_pred EecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEe-----CCCCHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999985 999888 347999999999
Q ss_pred HHHhcCcccHHHHHHHHHHHHHHHh---hc--HHHHHHHHHHH
Q 038300 359 KEVVMEREGEKIKRKTREMGEKIKE---KG--EEEIEWVADEL 396 (401)
Q Consensus 359 ~~~l~~~~~~~~~~~a~~~~~~~~~---~~--~~~~~~~v~~~ 396 (401)
+++|+ +++||+||+++++.+++ +| .++++++|+++
T Consensus 408 ~~~l~---~~~~r~~a~~l~~~~~~~~~gGSS~~nl~~~v~~~ 447 (448)
T PLN02562 408 RKVME---DSGMGERLMKLRERAMGEEARLRSMMNFTTLKDEL 447 (448)
T ss_pred HHHhC---CHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHh
Confidence 99998 78999999999999876 25 77999999876
No 18
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=9.8e-52 Score=395.85 Aligned_cols=380 Identities=22% Similarity=0.339 Sum_probs=273.1
Q ss_pred CC--eEEEEEeCCccc-hhhhccc----cCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhc----hHHH
Q 038300 2 SN--FHICFCSTPSIL-NSIKQLD----KFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMA----SPSF 70 (401)
Q Consensus 2 rG--~~Vt~~~~~~~~-~~i~~~~----~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l 70 (401)
+| +.|||++|+.+. ..+.... ...++++|+.+|... .++.. .. ..+....+..+...+ .+.+
T Consensus 30 ~gg~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~--~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~ 102 (468)
T PLN02207 30 QDDRIRITILLMKLQGQSHLDTYVKSIASSQPFVRFIDVPELE--EKPTL-GG----TQSVEAYVYDVIEKNIPLVRNIV 102 (468)
T ss_pred CCCCeEEEEEEcCCCcchhhHHhhhhccCCCCCeEEEEeCCCC--CCCcc-cc----ccCHHHHHHHHHHhcchhHHHHH
Confidence 56 899999999876 3222211 111369999997221 11211 11 122333444454444 4456
Q ss_pred HHHHhhc----CC-CEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhccc--CCCCC------CCCCCCCC-C
Q 038300 71 FNILKNL----SP-DLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKK--NSLGD------ANDDDEEF-P 136 (401)
Q Consensus 71 ~~~l~~~----~p-D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~--~~~~~------~p~~~~~~-~ 136 (401)
.+++++. +| +|||+|.+++|+.++|+++|||.++|++++++..+.+.+.... ..... .++..+++ +
T Consensus 103 ~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPgl~~ 182 (468)
T PLN02207 103 MDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADRHSKDTSVFVRNSEEMLSIPGFVN 182 (468)
T ss_pred HHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhccccccccCcCCCCCeEECCCCCC
Confidence 6666643 34 8999999999999999999999999999999887766543221 11111 01122333 2
Q ss_pred CCccccccccccccCCCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhh-cCCCeeeecccCCCC--CCC--
Q 038300 137 SSSIFIHDYYMKSYFSNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDL-IKKKVVPVGPLVQDP--VEQ-- 211 (401)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~-~~~~v~~vGPl~~~~--~~~-- 211 (401)
.+...+++.++.. ... ...+.+....+.+ ++++|+|||.+||++++++++.. ..++++.|||+.... ...
T Consensus 183 ~l~~~dlp~~~~~-~~~---~~~~~~~~~~~~~-~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~~~~~~~ 257 (468)
T PLN02207 183 PVPANVLPSALFV-EDG---YDAYVKLAILFTK-ANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKAQPHPEQ 257 (468)
T ss_pred CCChHHCcchhcC-Ccc---HHHHHHHHHhccc-CCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCcccccCCCCcc
Confidence 3444445544431 111 2223344445666 99999999999999999888652 335899999997532 111
Q ss_pred -CcccchHhhhhh--------------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCc
Q 038300 212 -TDHEKGATEIIH--------------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERA 276 (401)
Q Consensus 212 -~~~~~~~~~~l~--------------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (401)
..++++|.+||| ...++.+++++++.+|+.++++|||+++.... ...+.+|++|.+|+.+++
T Consensus 258 ~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~~~---~~~~~lp~~f~er~~~~g 334 (468)
T PLN02207 258 DLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEV---TNDDLLPEGFLDRVSGRG 334 (468)
T ss_pred ccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCCCc---cccccCCHHHHhhcCCCe
Confidence 011245999999 45788899999999999999999999985321 112358999999988776
Q ss_pred eEEcccCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHh-hCeeeeeecc----CCCCCCH
Q 038300 277 MVIEGWAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVED-VGIGLEVRRN----KCGRIQR 351 (401)
Q Consensus 277 ~~~~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~-~g~g~~l~~~----~~~~~~~ 351 (401)
+ +.+|+||.+||+|+++|+|||||||||++||+++|||||+||+++||+.||+++++ .|+|+.+..+ ..+.++.
T Consensus 335 ~-i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~ 413 (468)
T PLN02207 335 M-ICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNA 413 (468)
T ss_pred E-EEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccH
Confidence 5 45999999999999999999999999999999999999999999999999999887 6999977421 1134699
Q ss_pred HHHHHHHHHHhcCcccHHHHHHHHHHHHHHHh----hc--HHHHHHHHHHHHh
Q 038300 352 EEMARVIKEVVMEREGEKIKRKTREMGEKIKE----KG--EEEIEWVADELIH 398 (401)
Q Consensus 352 ~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~----~~--~~~~~~~v~~~~~ 398 (401)
++|+++|+++|+ +++++||+||+++++.+++ +| .++++++|+++..
T Consensus 414 e~i~~av~~vm~-~~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~ 465 (468)
T PLN02207 414 NEIETAIRCVMN-KDNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVIG 465 (468)
T ss_pred HHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Confidence 999999999996 3478999999999999986 45 7799999999864
No 19
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=7.2e-51 Score=394.15 Aligned_cols=372 Identities=25% Similarity=0.400 Sum_probs=268.7
Q ss_pred CeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhc--CCC
Q 038300 3 NFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNL--SPD 80 (401)
Q Consensus 3 G~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD 80 (401)
||+|||++++.+.+++++... +.+++|+.+| +++|.+.... .+....+......+.+.+++++++. ++|
T Consensus 40 G~~VT~~~t~~~~~~i~~~~~-~~gi~fv~lp----~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 110 (459)
T PLN02448 40 DILITFVVTEEWLGLIGSDPK-PDNIRFATIP----NVIPSELVRA----ADFPGFLEAVMTKMEAPFEQLLDRLEPPVT 110 (459)
T ss_pred CcEEEEEeCCchHhHhhccCC-CCCEEEEECC----CCCCCccccc----cCHHHHHHHHHHHhHHHHHHHHHhcCCCcE
Confidence 999999999999888777421 2489999886 4455432211 2333444444546778888888875 579
Q ss_pred EEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCCCCCC-----------CCCCCCCccccccccccc
Q 038300 81 LLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGDANDD-----------DEEFPSSSIFIHDYYMKS 149 (401)
Q Consensus 81 ~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~-----------~~~~~~~~~~~~~~~~~~ 149 (401)
|||+|.+++|+..+|+++|||+|.|+++++..++.+.+.......+..|.. .++++.+....++.++..
T Consensus 111 ~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~ 190 (459)
T PLN02448 111 AIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPVELSESGEERVDYIPGLSSTRLSDLPPIFHG 190 (459)
T ss_pred EEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCCCccccccCCccccCCCCCCCChHHCchhhcC
Confidence 999999999999999999999999999998777655443211000000100 111222222234433321
Q ss_pred cCCCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCC--C---C---CCcccchHhhh
Q 038300 150 YFSNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDP--V---E---QTDHEKGATEI 221 (401)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~--~---~---~~~~~~~~~~~ 221 (401)
.+......+......+.+ ++.+++|||.+||+.+++++++.++++++.|||+.... . . ..+.+.+|..|
T Consensus 191 --~~~~~~~~~~~~~~~~~~-~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iGP~~~~~~~~~~~~~~~~~~~~~~~~~w 267 (459)
T PLN02448 191 --NSRRVLKRILEAFSWVPK-AQYLLFTSFYELEAQAIDALKSKFPFPVYPIGPSIPYMELKDNSSSSNNEDNEPDYFQW 267 (459)
T ss_pred --CchHHHHHHHHHHhhccc-CCEEEEccHHHhhHHHHHHHHhhcCCceEEecCcccccccCCCccccccccchhHHHHH
Confidence 110001122223333445 78999999999999999999887777899999997531 1 0 01111359999
Q ss_pred hh--------------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhh
Q 038300 222 IH--------------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMK 287 (401)
Q Consensus 222 l~--------------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 287 (401)
|+ ...++.+++++++.+|+.++++|||+++.. ..++.++... +.++.+|+||.+
T Consensus 268 l~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~-----------~~~~~~~~~~-~~~v~~w~pQ~~ 335 (459)
T PLN02448 268 LDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGE-----------ASRLKEICGD-MGLVVPWCDQLK 335 (459)
T ss_pred HcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCc-----------hhhHhHhccC-CEEEeccCCHHH
Confidence 98 345678899999999999999999987632 1233333332 556679999999
Q ss_pred hcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhh-Ceeeeeecc--CCCCCCHHHHHHHHHHHhcC
Q 038300 288 ILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDV-GIGLEVRRN--KCGRIQREEMARVIKEVVME 364 (401)
Q Consensus 288 ~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~-g~g~~l~~~--~~~~~~~~~l~~~i~~~l~~ 364 (401)
||+|+++++|||||||||++||+++|||||++|++.||+.||+++++. |+|+.+..+ ..+.+++++|+++|+++|.+
T Consensus 336 iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~ 415 (459)
T PLN02448 336 VLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMDL 415 (459)
T ss_pred HhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999985 888888432 12357999999999999974
Q ss_pred --cccHHHHHHHHHHHHHHHh----hc--HHHHHHHHHHHHh
Q 038300 365 --REGEKIKRKTREMGEKIKE----KG--EEEIEWVADELIH 398 (401)
Q Consensus 365 --~~~~~~~~~a~~~~~~~~~----~~--~~~~~~~v~~~~~ 398 (401)
+++++||++|+++++.+++ +| .++++++|+++.+
T Consensus 416 ~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~ 457 (459)
T PLN02448 416 ESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQ 457 (459)
T ss_pred CchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 3578999999999999886 45 7899999998853
No 20
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=2.5e-50 Score=391.82 Aligned_cols=382 Identities=24% Similarity=0.393 Sum_probs=266.2
Q ss_pred CC--eEEEEEeCCccchhhh-------ccccC-CCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHH
Q 038300 2 SN--FHICFCSTPSILNSIK-------QLDKF-SLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFF 71 (401)
Q Consensus 2 rG--~~Vt~~~~~~~~~~i~-------~~~~~-~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 71 (401)
+| +.|||++|+.+..+.. +.... .++|+|+.+|++. +.+. .. ..+...+......+.+.++
T Consensus 29 ~G~~~~vT~v~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~----~~~~----~~-~~~~~~~~~~~~~~~~~l~ 99 (481)
T PLN02554 29 SDDRLSITVIIIPSRSGDDASSSAYIASLSASSEDRLRYEVISAGD----QPTT----ED-PTFQSYIDNQKPKVRDAVA 99 (481)
T ss_pred CCCCEEEEEEeCCCccchhhhhhhhhhhcccCCCCCeEEEEcCCCC----CCcc----cc-hHHHHHHHHHHHHHHHHHH
Confidence 56 8999999998865321 11011 2369999987332 2111 11 1222222233333444555
Q ss_pred HHHhhc-----CC-CEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcccC-C-----CCC----CCCCCCCC
Q 038300 72 NILKNL-----SP-DLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKKN-S-----LGD----ANDDDEEF 135 (401)
Q Consensus 72 ~~l~~~-----~p-D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~-~-----~~~----~p~~~~~~ 135 (401)
+++++. +| +|||+|++++|+.++|+++|||+++|++++++.++.+++..... . +.+ .++..+++
T Consensus 100 ~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iPgl 179 (481)
T PLN02554 100 KLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLYDEKKYDVSELEDSEVELDVPSL 179 (481)
T ss_pred HHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhhccccccCccccCCCCceeECCCC
Confidence 554331 34 79999999999999999999999999999999888776643211 1 011 01112222
Q ss_pred C-CCccccccccccccCCCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhh--cCCCeeeecccCC-CCC-C
Q 038300 136 P-SSSIFIHDYYMKSYFSNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDL--IKKKVVPVGPLVQ-DPV-E 210 (401)
Q Consensus 136 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~--~~~~v~~vGPl~~-~~~-~ 210 (401)
+ .+...+++...... .. ...+.+....+.+ ++++++||+.+||+.+..++.+. ..+++++|||+.. ... .
T Consensus 180 ~~pl~~~dlp~~~~~~-~~---~~~~~~~~~~~~~-~~gvlvNt~~eLe~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~~ 254 (481)
T PLN02554 180 TRPYPVKCLPSVLLSK-EW---LPLFLAQARRFRE-MKGILVNTVAELEPQALKFFSGSSGDLPPVYPVGPVLHLENSGD 254 (481)
T ss_pred CCCCCHHHCCCcccCH-HH---HHHHHHHHHhccc-CCEEEEechHHHhHHHHHHHHhcccCCCCEEEeCCCcccccccc
Confidence 1 22223343322210 00 1222333344556 89999999999999998888753 2258999999943 211 1
Q ss_pred --CCcccchHhhhhh--------------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCC--------CCCcccccCch
Q 038300 211 --QTDHEKGATEIIH--------------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCG--------AKVKVDEELPE 266 (401)
Q Consensus 211 --~~~~~~~~~~~l~--------------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~--------~~~~~~~~~~~ 266 (401)
..+.+.+|.+||| ...++.+++.+++.+|+.++++|||+++.... ...+....+|+
T Consensus 255 ~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~ 334 (481)
T PLN02554 255 DSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLEEILPE 334 (481)
T ss_pred ccccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCcccccccccccccchhhhCCh
Confidence 1122245999998 45677899999999999999999999985311 00111123689
Q ss_pred hHHHhhcCCceEEcccCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHH-HHhhCeeeeeecc-
Q 038300 267 SFLERTKERAMVIEGWAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARL-VEDVGIGLEVRRN- 344 (401)
Q Consensus 267 ~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~-~~~~g~g~~l~~~- 344 (401)
+|.+|+.+++++ .+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||++ +++.|+|+.+.++
T Consensus 335 ~~~~r~~~~g~v-~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~ 413 (481)
T PLN02554 335 GFLDRTKDIGKV-IGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYW 413 (481)
T ss_pred HHHHHhccCceE-EeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccc
Confidence 999998777654 5899999999999999999999999999999999999999999999999965 6677999998531
Q ss_pred -------CCCCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHh----hc--HHHHHHHHHHHHhhh
Q 038300 345 -------KCGRIQREEMARVIKEVVMEREGEKIKRKTREMGEKIKE----KG--EEEIEWVADELIHLF 400 (401)
Q Consensus 345 -------~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~----~~--~~~~~~~v~~~~~~~ 400 (401)
+...+++++|+++|+++|++ +++||+||+++++.+++ +| .++++++|+++.+.+
T Consensus 414 ~~~~~~~~~~~~~~e~l~~av~~vm~~--~~~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~~~~~~~ 480 (481)
T PLN02554 414 RGDLLAGEMETVTAEEIERGIRCLMEQ--DSDVRKRVKEMSEKCHVALMDGGSSHTALKKFIQDVTKNI 480 (481)
T ss_pred cccccccccCeEcHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhhC
Confidence 12468999999999999963 58999999999999986 45 779999999997654
No 21
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.2e-49 Score=386.52 Aligned_cols=383 Identities=26% Similarity=0.384 Sum_probs=262.7
Q ss_pred CC---eEEEEEeCCccch-----hhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHH
Q 038300 2 SN---FHICFCSTPSILN-----SIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNI 73 (401)
Q Consensus 2 rG---~~Vt~~~~~~~~~-----~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 73 (401)
+| +.||++++..+.. .+.......++|+|+.+|++. + +.+.+.... .....+......+.+.+++.
T Consensus 30 ~G~~~t~vt~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~--~-p~~~~~~~~---~~~~~~~~~~~~~~~~l~~~ 103 (475)
T PLN02167 30 LDRRIHTITILYWSLPFAPQADAFLKSLIASEPRIRLVTLPEVQ--D-PPPMELFVK---ASEAYILEFVKKMVPLVRDA 103 (475)
T ss_pred CCCCeEEEEEEECCCCcchhhhHHHhhcccCCCCeEEEECCCCC--C-Ccccccccc---chHHHHHHHHHHHHHHHHHH
Confidence 56 4577777654332 111111112369999997442 1 211111011 11123333444445555555
Q ss_pred Hhhc----------CCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcc---cCCCCC------CCCCCCC
Q 038300 74 LKNL----------SPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIK---KNSLGD------ANDDDEE 134 (401)
Q Consensus 74 l~~~----------~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~---~~~~~~------~p~~~~~ 134 (401)
|+++ +++|||+|++++|+.++|+++|||+++|++++++.++.+++... ..+..+ .++..++
T Consensus 104 l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg 183 (475)
T PLN02167 104 LSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLPERHRKTASEFDLSSGEEELPIPG 183 (475)
T ss_pred HHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHHHHHHhccccccccccCCCCCeeECCC
Confidence 5432 23899999999999999999999999999999988876654321 111010 1111222
Q ss_pred C-CCCccccccccccccCCCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhc--CCCeeeecccCCCC-C-
Q 038300 135 F-PSSSIFIHDYYMKSYFSNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLI--KKKVVPVGPLVQDP-V- 209 (401)
Q Consensus 135 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~--~~~v~~vGPl~~~~-~- 209 (401)
+ +.+....++...... .. ...+.+..+.+.+ ++++|+|||.+||+++++++++.. -+++++|||+.... .
T Consensus 184 l~~~l~~~dlp~~~~~~-~~---~~~~~~~~~~~~~-a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v~~vGpl~~~~~~~ 258 (475)
T PLN02167 184 FVNSVPTKVLPPGLFMK-ES---YEAWVEIAERFPE-AKGILVNSFTELEPNAFDYFSRLPENYPPVYPVGPILSLKDRT 258 (475)
T ss_pred CCCCCChhhCchhhhCc-ch---HHHHHHHHHhhcc-cCEeeeccHHHHHHHHHHHHHhhcccCCeeEEecccccccccc
Confidence 2 122222333222100 11 2223344455566 899999999999999999987641 14799999997532 1
Q ss_pred --CC-CcccchHhhhhh--------------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhh
Q 038300 210 --EQ-TDHEKGATEIIH--------------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERT 272 (401)
Q Consensus 210 --~~-~~~~~~~~~~l~--------------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (401)
.. ..++.+|.+||| ...++.+++.+++.+|+.++++|||+++............+|++|.+++
T Consensus 259 ~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~~~~~~~~~~~~~lp~~~~er~ 338 (475)
T PLN02167 259 SPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYEPLPEGFMDRV 338 (475)
T ss_pred CCCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEecCcccccchhhhCChHHHHHh
Confidence 11 112245999998 3457889999999999999999999998532111111235899999999
Q ss_pred cCCceEEcccCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHH-HHhhCeeeeeeccC----CC
Q 038300 273 KERAMVIEGWAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARL-VEDVGIGLEVRRNK----CG 347 (401)
Q Consensus 273 ~~~~~~~~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~-~~~~g~g~~l~~~~----~~ 347 (401)
.+++++ .+|+||.+||+|+++|+|||||||||++||+++|||||+||++.||+.||++ +++.|+|+.+..+. ..
T Consensus 339 ~~rg~v-~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~ 417 (475)
T PLN02167 339 MGRGLV-CGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGE 417 (475)
T ss_pred ccCeee-eccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCC
Confidence 888754 5899999999999999999999999999999999999999999999999987 55679999984310 13
Q ss_pred CCCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHh----hc--HHHHHHHHHHHHh
Q 038300 348 RIQREEMARVIKEVVMEREGEKIKRKTREMGEKIKE----KG--EEEIEWVADELIH 398 (401)
Q Consensus 348 ~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~----~~--~~~~~~~v~~~~~ 398 (401)
.+++++|+++|+++|.+ ++.||++|+++++.+++ +| .++++++|+++..
T Consensus 418 ~~~~~~l~~av~~~m~~--~~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~i~~ 472 (475)
T PLN02167 418 IVKADEIAGAVRSLMDG--EDVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDDLLG 472 (475)
T ss_pred cccHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 57999999999999974 35899999999999887 45 7799999998854
No 22
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=8.1e-42 Score=333.19 Aligned_cols=303 Identities=15% Similarity=0.210 Sum_probs=216.9
Q ss_pred hHHHHHHHh--hcCCCEEEEcCCCCcHHHHHHhc-CCCeEEEeccchHHHHHhhhhcccCCCCCCCCCCCCC-CCCccc-
Q 038300 67 SPSFFNILK--NLSPDLLIYDLIQPWAPALASSL-NIPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDEEF-PSSSIF- 141 (401)
Q Consensus 67 ~~~l~~~l~--~~~pD~vI~D~~~~~~~~~A~~l-gIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~- 141 (401)
.+.+.++|+ +.++|+||+|.+..|+..+|+++ ++|.|.+++................++++.|...... ..+...
T Consensus 123 ~~~~~~~L~~~~~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~~~~~~gg~p~~~syvP~~~~~~~~~Msf~~ 202 (507)
T PHA03392 123 LPNVKNLIANKNNKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAENFETMGAVSRHPVYYPNLWRSKFGNLNVWE 202 (507)
T ss_pred CHHHHHHHhcCCCceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchhHHHhhccCCCCCeeeCCcccCCCCCCCHHH
Confidence 556788887 66899999999999999999999 9999888775543322211110123444446544322 111110
Q ss_pred cccccc--------c----ccCCCCCCchHHH----HHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccC
Q 038300 142 IHDYYM--------K----SYFSNMVESPTTK----RLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLV 205 (401)
Q Consensus 142 ~~~~~~--------~----~~~~~~~~~~~~~----~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~ 205 (401)
++..++ . +..+. +..+.+. .+.+...+ ++++|+|+.+.|+. .+ .+++++++|||+.
T Consensus 203 R~~N~~~~~~~~~~~~~~~~~~~~-l~~~~f~~~~~~~~~l~~~-~~l~lvns~~~~d~-----~r-p~~p~v~~vGgi~ 274 (507)
T PHA03392 203 TINEIYTELRLYNEFSLLADEQNK-LLKQQFGPDTPTIRELRNR-VQLLFVNVHPVFDN-----NR-PVPPSVQYLGGLH 274 (507)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHH-HHHHHcCCCCCCHHHHHhC-CcEEEEecCccccC-----CC-CCCCCeeeecccc
Confidence 010000 0 00000 0011100 12222334 88999999988886 44 4678999999997
Q ss_pred CCCCCCCcccchHhhhhh----------H------hCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHH
Q 038300 206 QDPVEQTDHEKGATEIIH----------E------YFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFL 269 (401)
Q Consensus 206 ~~~~~~~~~~~~~~~~l~----------~------~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 269 (401)
.+.....+.++++.+|++ . ..++.+.++.+++++++.+++|||+++.... ...+|+
T Consensus 275 ~~~~~~~~l~~~l~~fl~~~~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~~-----~~~~p~--- 346 (507)
T PHA03392 275 LHKKPPQPLDDYLEEFLNNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVE-----AINLPA--- 346 (507)
T ss_pred cCCCCCCCCCHHHHHHHhcCCCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCcC-----cccCCC---
Confidence 642111111233889998 1 1346788999999999999999999874211 012444
Q ss_pred HhhcCCceEEcccCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCC
Q 038300 270 ERTKERAMVIEGWAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRI 349 (401)
Q Consensus 270 ~~~~~~~~~~~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~ 349 (401)
|+.+.+|+||.+||+|+.+++||||||+||++||+++|||+|++|+++||+.||+++++.|+|+.+ +...+
T Consensus 347 ------Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l---~~~~~ 417 (507)
T PHA03392 347 ------NVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRAL---DTVTV 417 (507)
T ss_pred ------ceEEecCCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEe---ccCCc
Confidence 899999999999999999999999999999999999999999999999999999999999999999 55778
Q ss_pred CHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc---HHHHHHHHHHHH
Q 038300 350 QREEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG---EEEIEWVADELI 397 (401)
Q Consensus 350 ~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~---~~~~~~~v~~~~ 397 (401)
++++|+++|+++|+ +++||+||+++++.+++++ .+.+.+.+|++.
T Consensus 418 t~~~l~~ai~~vl~---~~~y~~~a~~ls~~~~~~p~~~~~~av~~iE~v~ 465 (507)
T PHA03392 418 SAAQLVLAIVDVIE---NPKYRKNLKELRHLIRHQPMTPLHKAIWYTEHVI 465 (507)
T ss_pred CHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 99999999999998 7999999999999999976 455666666654
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=1.5e-42 Score=343.49 Aligned_cols=293 Identities=25% Similarity=0.380 Sum_probs=182.0
Q ss_pred HHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCCCCCCCCCCC-CCcc-ccc------
Q 038300 72 NILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDEEFP-SSSI-FIH------ 143 (401)
Q Consensus 72 ~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~-~~~------ 143 (401)
+.+++.++|++|+|.+.+|+..+|+.+|+|.+.+.++...............++++.|.....+. .+.. .++
T Consensus 113 ~~l~~~~fDlvI~d~f~~c~~~la~~l~iP~i~~~s~~~~~~~~~~~~g~p~~psyvP~~~s~~~~~msf~~Ri~N~l~~ 192 (500)
T PF00201_consen 113 EQLKSEKFDLVISDAFDPCGLALAHYLGIPVIIISSSTPMYDLSSFSGGVPSPPSYVPSMFSDFSDRMSFWQRIKNFLFY 192 (500)
T ss_dssp THHHHHHHCT-EEEEEESSHHHHHHHHHHTHHHHHHCCSCSCCTCCTSCCCTSTTSTTCBCCCSGTTSSSST--TTSHHH
T ss_pred HHHHhhccccceEeeccchhHHHHHHhcCCeEEEecccccchhhhhccCCCCChHHhccccccCCCccchhhhhhhhhhh
Confidence 34445579999999999999999999999998765543221111111011234445455433221 1110 000
Q ss_pred -------cccccccCCCCCCch---HHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCCCCCCc
Q 038300 144 -------DYYMKSYFSNMVESP---TTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDPVEQTD 213 (401)
Q Consensus 144 -------~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~~~~~~ 213 (401)
..+..+ ...+..+ .-....+.+.+ ++++++|+.+.++. +++.. +++++||++...+.. +
T Consensus 193 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~l~l~ns~~~ld~-----prp~~-p~v~~vGgl~~~~~~--~ 261 (500)
T PF00201_consen 193 LYFRFIFRYFFSP--QDKLYKKYFGFPFSFRELLSN-ASLVLINSHPSLDF-----PRPLL-PNVVEVGGLHIKPAK--P 261 (500)
T ss_dssp HHHHHHHHHGGGS---TTS-EEESS-GGGCHHHHHH-HHHCCSSTEEE---------HHHH-CTSTTGCGC-S------T
T ss_pred hhhccccccchhh--HHHHHhhhcccccccHHHHHH-HHHHhhhccccCcC-----Ccchh-hcccccCcccccccc--c
Confidence 001110 0000000 00012233444 77889999887775 55544 489999999654311 1
Q ss_pred ccchHhhhhh--------------H-hCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceE
Q 038300 214 HEKGATEIIH--------------E-YFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMV 278 (401)
Q Consensus 214 ~~~~~~~~l~--------------~-~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (401)
...++..|++ . ..++.+.+++++++|++.+++|||+++.. ....+|+ |++
T Consensus 262 l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~------~~~~l~~---------n~~ 326 (500)
T PF00201_consen 262 LPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGE------PPENLPK---------NVL 326 (500)
T ss_dssp CHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCS------HGCHHHT---------TEE
T ss_pred cccccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhhCCCccccccccc------ccccccc---------eEE
Confidence 1223777876 1 22444558899999999999999998752 1122333 889
Q ss_pred EcccCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHH
Q 038300 279 IEGWAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVI 358 (401)
Q Consensus 279 ~~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i 358 (401)
+.+|+||.+||+||++++||||||+||+.||+++|||+|++|+++||+.||+++++.|+|+.+ +..+++.++|.++|
T Consensus 327 ~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l---~~~~~~~~~l~~ai 403 (500)
T PF00201_consen 327 IVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVL---DKNDLTEEELRAAI 403 (500)
T ss_dssp EESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEE---GGGC-SHHHHHHHH
T ss_pred EeccccchhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEE---EecCCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999 56789999999999
Q ss_pred HHHhcCcccHHHHHHHHHHHHHHHhhc---HHHHHHHHHHH
Q 038300 359 KEVVMEREGEKIKRKTREMGEKIKEKG---EEEIEWVADEL 396 (401)
Q Consensus 359 ~~~l~~~~~~~~~~~a~~~~~~~~~~~---~~~~~~~v~~~ 396 (401)
+++|+ |++|++||+++++++++++ .+.+...+|++
T Consensus 404 ~~vl~---~~~y~~~a~~ls~~~~~~p~~p~~~~~~~ie~v 441 (500)
T PF00201_consen 404 REVLE---NPSYKENAKRLSSLFRDRPISPLERAVWWIEYV 441 (500)
T ss_dssp HHHHH---SHHHHHHHHHHHHTTT-----------------
T ss_pred HHHHh---hhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 99999 8999999999999999977 44455555554
No 24
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=6.4e-35 Score=280.17 Aligned_cols=344 Identities=18% Similarity=0.275 Sum_probs=226.7
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCC-CCCCCCCCCchHHHHHHHhhchHHHHHHHhhcCC
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQY-HTTKGLPPHLMPTLKEAFDMASPSFFNILKNLSP 79 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~p 79 (401)
+|||+|+|++++.+.+.++.. |+.|++++.. .+. +... +............+......+.+.+.+.++..+|
T Consensus 21 ~~Gh~V~~~~~~~~~~~v~~~-----G~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p 93 (392)
T TIGR01426 21 ARGHRVTYATTEEFAERVEAA-----GAEFVLYGSA-LPP-PDNPPENTEEEPIDIIEKLLDEAEDVLPQLEEAYKGDRP 93 (392)
T ss_pred hCCCeEEEEeCHHHHHHHHHc-----CCEEEecCCc-Ccc-ccccccccCcchHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 489999999999999999999 9999988621 111 1000 0000000112222333333345566777777899
Q ss_pred CEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCCCCCCCCCC---CCCc--cc----ccccccccc
Q 038300 80 DLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDEEF---PSSS--IF----IHDYYMKSY 150 (401)
Q Consensus 80 D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~--~~----~~~~~~~~~ 150 (401)
||||+|.+++++..+|+++|||+|.+++.+.... ..+. .. .|+....+ +... .. .++.+..
T Consensus 94 DlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~---~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~-- 163 (392)
T TIGR01426 94 DLIVYDIASWTGRLLARKWDVPVISSFPTFAANE---EFEE----MV-SPAGEGSAEEGAIAERGLAEYVARLSALLE-- 163 (392)
T ss_pred CEEEECCccHHHHHHHHHhCCCEEEEehhhcccc---cccc----cc-cccchhhhhhhccccchhHHHHHHHHHHHH--
Confidence 9999999889999999999999999865432110 0000 00 01110000 0000 00 0111111
Q ss_pred CCCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCCCCCCcccchHhhhhh-------
Q 038300 151 FSNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDPVEQTDHEKGATEIIH------- 223 (401)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~l~------- 223 (401)
..+ +.......+. ... .+..+..+.+.|++ ..+.++++++++||+...... ...|+.
T Consensus 164 ~~g-l~~~~~~~~~--~~~-~~~~l~~~~~~l~~-----~~~~~~~~~~~~Gp~~~~~~~-------~~~~~~~~~~~~~ 227 (392)
T TIGR01426 164 EHG-ITTPPVEFLA--APR-RDLNLVYTPKAFQP-----AGETFDDSFTFVGPCIGDRKE-------DGSWERPGDGRPV 227 (392)
T ss_pred HhC-CCCCCHHHHh--cCC-cCcEEEeCChHhCC-----CccccCCCeEEECCCCCCccc-------cCCCCCCCCCCCE
Confidence 111 0000011111 112 44456666555544 455678899999998754211 011221
Q ss_pred ----Hh---CCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhhhcccCCcce
Q 038300 224 ----EY---FLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMKILGHPSIGG 296 (401)
Q Consensus 224 ----~~---~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~ 296 (401)
.+ ...+..++++++++.+.+++++|..+..... .....+ +.|+.+.+|+||.++|+++++
T Consensus 228 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~~--~~~~~~---------~~~v~~~~~~p~~~ll~~~~~-- 294 (392)
T TIGR01426 228 VLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVDP--ADLGEL---------PPNVEVRQWVPQLEILKKADA-- 294 (392)
T ss_pred EEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCCh--hHhccC---------CCCeEEeCCCCHHHHHhhCCE--
Confidence 22 2344577889999998999999987653111 000112 348888999999999999998
Q ss_pred EEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcccHHHHHHHHH
Q 038300 297 FVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMEREGEKIKRKTRE 376 (401)
Q Consensus 297 ~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~ 376 (401)
||||||+||++|++++|+|+|++|...||+.||+++++.|+|+.+ ....+++++|.++|+++|. +++|++++++
T Consensus 295 ~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l---~~~~~~~~~l~~ai~~~l~---~~~~~~~~~~ 368 (392)
T TIGR01426 295 FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHL---PPEEVTAEKLREAVLAVLS---DPRYAERLRK 368 (392)
T ss_pred EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEe---ccccCCHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998 5567899999999999998 7899999999
Q ss_pred HHHHHHhhc-HHHHHHHHHHH
Q 038300 377 MGEKIKEKG-EEEIEWVADEL 396 (401)
Q Consensus 377 ~~~~~~~~~-~~~~~~~v~~~ 396 (401)
+++.+++.+ .+.++++|+.+
T Consensus 369 l~~~~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 369 MRAEIREAGGARRAADEIEGF 389 (392)
T ss_pred HHHHHHHcCCHHHHHHHHHHh
Confidence 999999865 77777777765
No 25
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=100.00 E-value=1.3e-33 Score=272.23 Aligned_cols=343 Identities=14% Similarity=0.144 Sum_probs=213.5
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCC----CCCC---CchHHHHHHHhhchHHHHHH
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTK----GLPP---HLMPTLKEAFDMASPSFFNI 73 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~l~~~ 73 (401)
+|||+|+|++++.+...++.. |++|++++.. .+.......... .... .....+......+...+.+.
T Consensus 26 ~rGh~V~~~t~~~~~~~v~~~-----G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (401)
T cd03784 26 AAGHEVRVATPPEFADLVEAA-----GLEFVPVGGD-PDELLASPERNAGLLLLGPGLLLGALRLLRREAEAMLDDLVAA 99 (401)
T ss_pred HCCCeEEEeeCHhHHHHHHHc-----CCceeeCCCC-HHHHHhhhhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 489999999999999999998 9999988611 110000000000 0000 11222333444555666666
Q ss_pred HhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCCCCCCCCCCCCCccccccccccccCCC
Q 038300 74 LKNLSPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDEEFPSSSIFIHDYYMKSYFSN 153 (401)
Q Consensus 74 l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 153 (401)
+++.+||+||+|.+++++..+|+++|||+|.+++++........+ |. .. ........... ....
T Consensus 100 ~~~~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~----------~~--~~---~~~~~~~~~~~-~~~~ 163 (401)
T cd03784 100 ARDWGPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSAFPP----------PL--GR---ANLRLYALLEA-ELWQ 163 (401)
T ss_pred hcccCCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCccccCCC----------cc--ch---HHHHHHHHHHH-HHHH
Confidence 777899999999988999999999999999999875432111000 11 00 00000000000 0000
Q ss_pred CCCchHHHHHHHHhhc--------cccEEEEcChhHhhHHHHHHHHhhcCCCeeeec-ccCCCC-C-CCCcccchHhhhh
Q 038300 154 MVESPTTKRLLQCFER--------SCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVG-PLVQDP-V-EQTDHEKGATEII 222 (401)
Q Consensus 154 ~~~~~~~~~~~~~~~~--------~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vG-Pl~~~~-~-~~~~~~~~~~~~l 222 (401)
.............+.- ..+..+....+.+. .....++++..++| ++...+ . ....+ +..|+
T Consensus 164 ~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~ 235 (401)
T cd03784 164 DLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVL-----PPPPDWPRFDLVTGYGFRDVPYNGPPPPE---LWLFL 235 (401)
T ss_pred HHHHHHHHHHHHhcCCCCCcccccCCCcEEEecCcccC-----CCCCCccccCcEeCCCCCCCCCCCCCCHH---HHHHH
Confidence 0000111111111110 01122222211111 13344566666675 443322 1 11223 66787
Q ss_pred h---------HhCC---C-HHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhhhc
Q 038300 223 H---------EYFL---S-KEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMKIL 289 (401)
Q Consensus 223 ~---------~~~~---~-~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l 289 (401)
+ .++. . ...+..+++++...+.++||+++..... ...+| .|+.+.+|+||.++|
T Consensus 236 ~~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~----~~~~~---------~~v~~~~~~p~~~ll 302 (401)
T cd03784 236 AAGRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGLG----AEDLP---------DNVRVVDFVPHDWLL 302 (401)
T ss_pred hCCCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCcccc----ccCCC---------CceEEeCCCCHHHHh
Confidence 6 2222 2 3456777899988899999998754211 01223 389999999999999
Q ss_pred ccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcccHH
Q 038300 290 GHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMEREGEK 369 (401)
Q Consensus 290 ~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 369 (401)
+++++ ||||||+||++|++++|||+|++|+..||+.||+++++.|+|+.+ ....+++++|.++|+++++ + .
T Consensus 303 ~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l---~~~~~~~~~l~~al~~~l~---~-~ 373 (401)
T cd03784 303 PRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPAL---DPRELTAERLAAALRRLLD---P-P 373 (401)
T ss_pred hhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCC---CcccCCHHHHHHHHHHHhC---H-H
Confidence 99988 999999999999999999999999999999999999999999998 5556899999999999997 4 4
Q ss_pred HHHHHHHHHHHHHh-hcHHHHHHHHHH
Q 038300 370 IKRKTREMGEKIKE-KGEEEIEWVADE 395 (401)
Q Consensus 370 ~~~~a~~~~~~~~~-~~~~~~~~~v~~ 395 (401)
++++++++++.+++ .|...+.++|+.
T Consensus 374 ~~~~~~~~~~~~~~~~g~~~~~~~ie~ 400 (401)
T cd03784 374 SRRRAAALLRRIREEDGVPSAADVIER 400 (401)
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHhh
Confidence 55667777666665 447777777764
No 26
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=1.5e-32 Score=272.00 Aligned_cols=281 Identities=27% Similarity=0.397 Sum_probs=183.8
Q ss_pred CCCEEEEcCCCCcHHHHHHhcC-CCeEEEeccchHHHHHhhhhcccCCCCCCCCCCCCCC--CCcc---------ccccc
Q 038300 78 SPDLLIYDLIQPWAPALASSLN-IPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDEEFP--SSSI---------FIHDY 145 (401)
Q Consensus 78 ~pD~vI~D~~~~~~~~~A~~lg-IP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~---------~~~~~ 145 (401)
++||+|+|.++.|...++...+ |+..++++.++.......+... .+.|....... .+.. ..+..
T Consensus 114 ~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~----~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~ 189 (496)
T KOG1192|consen 114 KFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSPL----SYVPSPFSLSSGDDMSFPERVPNLIKKDLPS 189 (496)
T ss_pred CccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCcc----cccCcccCccccccCcHHHHHHHHHHHHHHH
Confidence 3999999998777887887765 9999888877665543332111 11122111000 0000 00111
Q ss_pred cccccCCCCCCchHH-----------HHHHHHhhccccEEEEcChhHhhHHHHHHHHhh-cCCCeeeecccCCCC-CCCC
Q 038300 146 YMKSYFSNMVESPTT-----------KRLLQCFERSCNIVLIKSFRELEGKYIDYLSDL-IKKKVVPVGPLVQDP-VEQT 212 (401)
Q Consensus 146 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~-~~~~v~~vGPl~~~~-~~~~ 212 (401)
+.............. ....+.+.+ ++..++|+...++ .++. ..+++++|||+.... ....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~ln~~~~~~------~~~~~~~~~v~~IG~l~~~~~~~~~ 262 (496)
T KOG1192|consen 190 FLFSLSDDRKQDKISKELLGDILNWKPTASGIIVN-ASFIFLNSNPLLD------FEPRPLLPKVIPIGPLHVKDSKQKS 262 (496)
T ss_pred HHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhc-CeEEEEccCcccC------CCCCCCCCCceEECcEEecCccccc
Confidence 100000000000000 001122222 4455555543332 3222 357899999998763 1111
Q ss_pred cccchHhhhhh----------------Hh---CCCHHHHHHHHHHHHhC-CCceEEeecCCCCCCCcccccCchhHHHhh
Q 038300 213 DHEKGATEIIH----------------EY---FLSKEEMEDIALGLELS-GVNFIWVVRFPCGAKVKVDEELPESFLERT 272 (401)
Q Consensus 213 ~~~~~~~~~l~----------------~~---~~~~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (401)
+. +.+|++ +. .++.++..+++.+|++. +++|+|+++...... +++++.++
T Consensus 263 ~~---~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~~~------~~~~~~~~- 332 (496)
T KOG1192|consen 263 PL---PLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDDSIY------FPEGLPNR- 332 (496)
T ss_pred cc---cHHHHHHHhhccCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCcchh------hhhcCCCC-
Confidence 12 556776 33 78999999999999999 889999998642110 22333222
Q ss_pred cCCceEEcccCchhhh-cccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCH
Q 038300 273 KERAMVIEGWAPQMKI-LGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQR 351 (401)
Q Consensus 273 ~~~~~~~~~~~p~~~~-l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~ 351 (401)
...|++..+|+||.++ |.|+++++|||||||||++|++++|||+|++|+++||+.||+++++.|.|..+. ..+.+.
T Consensus 333 ~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~---~~~~~~ 409 (496)
T KOG1192|consen 333 GRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLD---KRDLVS 409 (496)
T ss_pred CcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEe---hhhcCc
Confidence 2346777799999988 699999999999999999999999999999999999999999999996666662 344555
Q ss_pred HHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc
Q 038300 352 EEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG 385 (401)
Q Consensus 352 ~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~ 385 (401)
+.+.+++.++++ +++|+++++++++..++++
T Consensus 410 ~~~~~~~~~il~---~~~y~~~~~~l~~~~~~~p 440 (496)
T KOG1192|consen 410 EELLEAIKEILE---NEEYKEAAKRLSEILRDQP 440 (496)
T ss_pred HHHHHHHHHHHc---ChHHHHHHHHHHHHHHcCC
Confidence 559999999998 8999999999999999877
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-30 Score=248.05 Aligned_cols=355 Identities=17% Similarity=0.194 Sum_probs=215.2
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhcCCC
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNLSPD 80 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD 80 (401)
++||+|+|++++.+.+.++++ |+.|..++.. +...............+.. ...........+.+.+.+..||
T Consensus 27 ~~gheV~~~~~~~~~~~ve~a-----g~~f~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~~~~ 98 (406)
T COG1819 27 RRGHEVVFASTGKFKEFVEAA-----GLAFVAYPIR--DSELATEDGKFAGVKSFRR-LLQQFKKLIRELLELLRELEPD 98 (406)
T ss_pred hcCCeEEEEeCHHHHHHHHHh-----Ccceeecccc--CChhhhhhhhhhccchhHH-HhhhhhhhhHHHHHHHHhcchh
Confidence 489999999999999999999 9888877522 1111111111111111111 1222223445667778888999
Q ss_pred EEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhccc-CCCCCCCCCCCCC-----CCCccccccccccccCCCC
Q 038300 81 LLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKK-NSLGDANDDDEEF-----PSSSIFIHDYYMKSYFSNM 154 (401)
Q Consensus 81 ~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~ 154 (401)
+++.|.-...+ .+++..++|++...............+... ...+..+.....+ +..................
T Consensus 99 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 177 (406)
T COG1819 99 LVVDDARLSLG-LAARLLGIPVVGINVAPYTPLPAAGLPLPPVGIAGKLPIPLYPLPPRLVRPLIFARSWLPKLVVRRNL 177 (406)
T ss_pred hhhcchhhhhh-hhhhhcccchhhhhhhhccCCcccccCcccccccccccccccccChhhccccccchhhhhhhhhhhhc
Confidence 99988764444 888999999988765533222211111100 0000000000000 0000000000000000000
Q ss_pred CCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCCCCCCcccchHhhhhh---------Hh
Q 038300 155 VESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDPVEQTDHEKGATEIIH---------EY 225 (401)
Q Consensus 155 ~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~l~---------~~ 225 (401)
........+...+.. .....+-......+ ....+|....++||+...+... ...|.. .+
T Consensus 178 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~p~~~~~~~~~~~~~~~~------~~~~~~~d~~~vyvslG 245 (406)
T COG1819 178 GLELGLPNIRRLFAS-GPLLEIAYTDVLFP-----PGDRLPFIGPYIGPLLGEAANE------LPYWIPADRPIVYVSLG 245 (406)
T ss_pred cccccccchHHHhcC-CCCccccccccccC-----CCCCCCCCcCcccccccccccc------CcchhcCCCCeEEEEcC
Confidence 000000001111111 11111111111000 0023455566677776542111 112222 22
Q ss_pred CCC--HHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhhhcccCCcceEEecCCc
Q 038300 226 FLS--KEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMKILGHPSIGGFVSHCGW 303 (401)
Q Consensus 226 ~~~--~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~i~hgG~ 303 (401)
+.. .+.+..+.+++...+.++|..++.. . .....+|+ |+.+.+|+||.++|+++++ ||||||+
T Consensus 246 t~~~~~~l~~~~~~a~~~l~~~vi~~~~~~--~--~~~~~~p~---------n~~v~~~~p~~~~l~~ad~--vI~hGG~ 310 (406)
T COG1819 246 TVGNAVELLAIVLEALADLDVRVIVSLGGA--R--DTLVNVPD---------NVIVADYVPQLELLPRADA--VIHHGGA 310 (406)
T ss_pred CcccHHHHHHHHHHHHhcCCcEEEEecccc--c--cccccCCC---------ceEEecCCCHHHHhhhcCE--EEecCCc
Confidence 222 4567778899999999999987641 1 11233555 8999999999999999999 9999999
Q ss_pred hhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHh
Q 038300 304 SSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMEREGEKIKRKTREMGEKIKE 383 (401)
Q Consensus 304 ~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~ 383 (401)
||++||+++|||+|++|...||+.||.++++.|+|+.+ ....++.+.++++|+++|+ ++.|+++++++++.+++
T Consensus 311 gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l---~~~~l~~~~l~~av~~vL~---~~~~~~~~~~~~~~~~~ 384 (406)
T COG1819 311 GTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIAL---PFEELTEERLRAAVNEVLA---DDSYRRAAERLAEEFKE 384 (406)
T ss_pred chHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceec---CcccCCHHHHHHHHHHHhc---CHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999 6678999999999999999 89999999999999999
Q ss_pred hc-HHHHHHHHHHHH
Q 038300 384 KG-EEEIEWVADELI 397 (401)
Q Consensus 384 ~~-~~~~~~~v~~~~ 397 (401)
.+ .+.+++++++..
T Consensus 385 ~~g~~~~a~~le~~~ 399 (406)
T COG1819 385 EDGPAKAADLLEEFA 399 (406)
T ss_pred cccHHHHHHHHHHHH
Confidence 66 888888888753
No 28
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.78 E-value=1e-17 Score=156.43 Aligned_cols=227 Identities=20% Similarity=0.293 Sum_probs=141.4
Q ss_pred chHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCCCCCCCCCCCCCccccccc
Q 038300 66 ASPSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDEEFPSSSIFIHDY 145 (401)
Q Consensus 66 ~~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 145 (401)
....+.+++++.+||+||+|.. +.+..+|+..|||++.+....... ++ ...+ +.. . ..
T Consensus 82 ~~~~~~~~l~~~~pDlVIsD~~-~~~~~aa~~~giP~i~i~~~~~~~-----~~----~~~~-~~~-------~--~~-- 139 (318)
T PF13528_consen 82 RIRREIRWLREFRPDLVISDFY-PLAALAARRAGIPVIVISNQYWFL-----HP----NFWL-PWD-------Q--DF-- 139 (318)
T ss_pred HHHHHHHHHHhcCCCEEEEcCh-HHHHHHHHhcCCCEEEEEehHHcc-----cc----cCCc-chh-------h--hH--
Confidence 3445667778889999999965 557789999999999987653210 00 0000 000 0 00
Q ss_pred cccccCCCCCCchHHHHHHHH--hhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCC-CCCC-cccchHhhh
Q 038300 146 YMKSYFSNMVESPTTKRLLQC--FERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDP-VEQT-DHEKGATEI 221 (401)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~--~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~-~~~~-~~~~~~~~~ 221 (401)
...+.+.... +.. ++..|.-++. .. .. ...++..+||+...+ .... .+...+.-.
T Consensus 140 -----------~~~~~~~~~~~~~~~-~~~~l~~~~~-~~------~~--~~~~~~~~~p~~~~~~~~~~~~~~~~iLv~ 198 (318)
T PF13528_consen 140 -----------GRLIERYIDRYHFPP-ADRRLALSFY-PP------LP--PFFRVPFVGPIIRPEIRELPPEDEPKILVY 198 (318)
T ss_pred -----------HHHHHHhhhhccCCc-ccceecCCcc-cc------cc--ccccccccCchhcccccccCCCCCCEEEEE
Confidence 1111222221 222 4445554443 11 00 123466789887653 1111 111112111
Q ss_pred hhHhCCCHHHHHHHHHHHHhCC-CceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccC-ch-hhhcccCCcceEE
Q 038300 222 IHEYFLSKEEMEDIALGLELSG-VNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWA-PQ-MKILGHPSIGGFV 298 (401)
Q Consensus 222 l~~~~~~~~~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~-~~~l~~~~~~~~i 298 (401)
+ +..... .++++++..+ .+|++. +... ... ...|+.+.+|. +. .++|+.+++ +|
T Consensus 199 ~--gg~~~~---~~~~~l~~~~~~~~~v~-g~~~------~~~---------~~~ni~~~~~~~~~~~~~m~~ad~--vI 255 (318)
T PF13528_consen 199 F--GGGGPG---DLIEALKALPDYQFIVF-GPNA------ADP---------RPGNIHVRPFSTPDFAELMAAADL--VI 255 (318)
T ss_pred e--CCCcHH---HHHHHHHhCCCCeEEEE-cCCc------ccc---------cCCCEEEeecChHHHHHHHHhCCE--EE
Confidence 1 222222 5566666555 666655 5321 000 13478888876 43 489999998 99
Q ss_pred ecCCchhHHHHHHhCCcEEecCC--ccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHH
Q 038300 299 SHCGWSSVMESMRLGVPIIAMPM--HVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEV 361 (401)
Q Consensus 299 ~hgG~~s~~eal~~GvP~i~~P~--~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~ 361 (401)
||||+||++|++++|+|+|++|. +.||..||+++++.|+|+.+ ...+++++.|+++|+++
T Consensus 256 s~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~---~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 256 SKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVL---SQEDLTPERLAEFLERL 317 (318)
T ss_pred ECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEc---ccccCCHHHHHHHHhcC
Confidence 99999999999999999999999 78999999999999999999 66889999999999764
No 29
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.76 E-value=4.7e-16 Score=146.30 Aligned_cols=281 Identities=14% Similarity=0.184 Sum_probs=165.2
Q ss_pred CCeEEEEEeCCccchh--hhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhcCC
Q 038300 2 SNFHICFCSTPSILNS--IKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNLSP 79 (401)
Q Consensus 2 rG~~Vt~~~~~~~~~~--i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~p 79 (401)
+||+|+|+.++.-.+. +.+. |+.|+.++.. ++. ..... ............ .-....++++.+|
T Consensus 28 ~g~~v~~vg~~~~~e~~l~~~~-----g~~~~~~~~~---~l~----~~~~~--~~~~~~~~~~~~-~~~~~~i~~~~kP 92 (352)
T PRK12446 28 DNWDISYIGSHQGIEKTIIEKE-----NIPYYSISSG---KLR----RYFDL--KNIKDPFLVMKG-VMDAYVRIRKLKP 92 (352)
T ss_pred CCCEEEEEECCCccccccCccc-----CCcEEEEecc---CcC----CCchH--HHHHHHHHHHHH-HHHHHHHHHhcCC
Confidence 6999999986664432 2233 7888877511 221 00000 011111222221 2234567889999
Q ss_pred CEEEEcCCCC--cHHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCCCCCCCCCCCCCccccccccccccCCCCCCc
Q 038300 80 DLLIYDLIQP--WAPALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDEEFPSSSIFIHDYYMKSYFSNMVES 157 (401)
Q Consensus 80 D~vI~D~~~~--~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (401)
|+||..--.. .+..+|..+|+|++..-.... |
T Consensus 93 dvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~------------------~---------------------------- 126 (352)
T PRK12446 93 DVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMT------------------P---------------------------- 126 (352)
T ss_pred CEEEecCchhhHHHHHHHHHcCCCEEEECCCCC------------------c----------------------------
Confidence 9999874322 246788899999988654311 0
Q ss_pred hHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcC-CCeeeecccCCCC-CCCCcccchHhhhh--h---------H
Q 038300 158 PTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIK-KKVVPVGPLVQDP-VEQTDHEKGATEII--H---------E 224 (401)
Q Consensus 158 ~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~-~~v~~vGPl~~~~-~~~~~~~~~~~~~l--~---------~ 224 (401)
....++... - ++.+++ +|++ . ...++ .++..+|+-+... ...... . ...-+ + .
T Consensus 127 g~~nr~~~~--~-a~~v~~-~f~~----~----~~~~~~~k~~~tG~Pvr~~~~~~~~~-~-~~~~~~l~~~~~~iLv~G 192 (352)
T PRK12446 127 GLANKIALR--F-ASKIFV-TFEE----A----AKHLPKEKVIYTGSPVREEVLKGNRE-K-GLAFLGFSRKKPVITIMG 192 (352)
T ss_pred cHHHHHHHH--h-hCEEEE-Eccc----h----hhhCCCCCeEEECCcCCcccccccch-H-HHHhcCCCCCCcEEEEEC
Confidence 001222211 1 444443 3321 1 11122 4677888765442 110000 0 11111 1 3
Q ss_pred hCCCHHHHHHHHH-HHHh--CCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccC-chh-hhcccCCcceEEe
Q 038300 225 YFLSKEEMEDIAL-GLEL--SGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWA-PQM-KILGHPSIGGFVS 299 (401)
Q Consensus 225 ~~~~~~~~~~~~~-~l~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~-~~l~~~~~~~~i~ 299 (401)
++.....+.+++. .+.. .+++++|++|... + +....+ ..++.+.+|+ +++ ++++++|+ +||
T Consensus 193 GS~Ga~~in~~~~~~l~~l~~~~~vv~~~G~~~---------~-~~~~~~--~~~~~~~~f~~~~m~~~~~~adl--vIs 258 (352)
T PRK12446 193 GSLGAKKINETVREALPELLLKYQIVHLCGKGN---------L-DDSLQN--KEGYRQFEYVHGELPDILAITDF--VIS 258 (352)
T ss_pred CccchHHHHHHHHHHHHhhccCcEEEEEeCCch---------H-HHHHhh--cCCcEEecchhhhHHHHHHhCCE--EEE
Confidence 4455555544432 2322 2588999987531 1 111111 1244556787 544 89999999 999
Q ss_pred cCCchhHHHHHHhCCcEEecCCc-----cchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcccHHHHHHH
Q 038300 300 HCGWSSVMESMRLGVPIIAMPMH-----VDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMEREGEKIKRKT 374 (401)
Q Consensus 300 hgG~~s~~eal~~GvP~i~~P~~-----~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a 374 (401)
|||.+|++|++++|+|+|++|+. +||..||+++++.|+|..+ ...+++++.|.++|.+++.+ .+.|++++
T Consensus 259 r~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l---~~~~~~~~~l~~~l~~ll~~--~~~~~~~~ 333 (352)
T PRK12446 259 RAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVL---YEEDVTVNSLIKHVEELSHN--NEKYKTAL 333 (352)
T ss_pred CCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEc---chhcCCHHHHHHHHHHHHcC--HHHHHHHH
Confidence 99999999999999999999984 5899999999999999999 66788999999999999973 23455444
Q ss_pred HH
Q 038300 375 RE 376 (401)
Q Consensus 375 ~~ 376 (401)
++
T Consensus 334 ~~ 335 (352)
T PRK12446 334 KK 335 (352)
T ss_pred HH
Confidence 33
No 30
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.75 E-value=1.1e-15 Score=142.45 Aligned_cols=146 Identities=23% Similarity=0.345 Sum_probs=113.2
Q ss_pred HHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCc-eEEcccCchh-hhcccCCcceEEecCCchhHHHH
Q 038300 232 MEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERA-MVIEGWAPQM-KILGHPSIGGFVSHCGWSSVMES 309 (401)
Q Consensus 232 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~-~~l~~~~~~~~i~hgG~~s~~ea 309 (401)
+.++...|.+ ++++++..|... .+.........+ +.+.+|..++ ++|+.+|+ +||++|++|+.|+
T Consensus 202 v~~~~~~l~~-~~~v~~~~G~~~----------~~~~~~~~~~~~~~~v~~f~~dm~~~~~~ADL--vIsRaGa~Ti~E~ 268 (357)
T COG0707 202 VPEALAKLAN-RIQVIHQTGKND----------LEELKSAYNELGVVRVLPFIDDMAALLAAADL--VISRAGALTIAEL 268 (357)
T ss_pred HHHHHHHhhh-CeEEEEEcCcch----------HHHHHHHHhhcCcEEEeeHHhhHHHHHHhccE--EEeCCcccHHHHH
Confidence 3334444433 578888887531 123333333344 7788899887 99999999 9999999999999
Q ss_pred HHhCCcEEecCCc----cchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc
Q 038300 310 MRLGVPIIAMPMH----VDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG 385 (401)
Q Consensus 310 l~~GvP~i~~P~~----~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~ 385 (401)
++.|+|+|.+|+. +||..||+.+++.|+|..+ ++.++|.+.+.+.|.+++. + .++.++|++.+++.+
T Consensus 269 ~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i---~~~~lt~~~l~~~i~~l~~---~---~~~l~~m~~~a~~~~ 339 (357)
T COG0707 269 LALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVI---RQSELTPEKLAELILRLLS---N---PEKLKAMAENAKKLG 339 (357)
T ss_pred HHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEe---ccccCCHHHHHHHHHHHhc---C---HHHHHHHHHHHHhcC
Confidence 9999999999983 4899999999999999999 7788999999999999998 3 677788888888766
Q ss_pred -HHHHHHHHHHHHhh
Q 038300 386 -EEEIEWVADELIHL 399 (401)
Q Consensus 386 -~~~~~~~v~~~~~~ 399 (401)
.+++.++++.+...
T Consensus 340 ~p~aa~~i~~~~~~~ 354 (357)
T COG0707 340 KPDAAERIADLLLAL 354 (357)
T ss_pred CCCHHHHHHHHHHHH
Confidence 55666666555443
No 31
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.72 E-value=2.5e-16 Score=146.98 Aligned_cols=80 Identities=23% Similarity=0.438 Sum_probs=66.7
Q ss_pred ceEEcccCc-h-hhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCcc--chhhHHHHHHhhCeeeeeeccCCCCCCH
Q 038300 276 AMVIEGWAP-Q-MKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHV--DQPLNARLVEDVGIGLEVRRNKCGRIQR 351 (401)
Q Consensus 276 ~~~~~~~~p-~-~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~--dQ~~na~~~~~~g~g~~l~~~~~~~~~~ 351 (401)
|+.+.+|.| + .+.|+.+++ +|||||++|++|++++|+|+|++|..+ ||..||+.+++.|+|+.+ +..++
T Consensus 230 ~v~~~~~~~~~~~~~l~~ad~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l---~~~~~-- 302 (321)
T TIGR00661 230 NVEIRRITTDNFKELIKNAEL--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL---EYKEL-- 302 (321)
T ss_pred CEEEEECChHHHHHHHHhCCE--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc---ChhhH--
Confidence 788888997 3 388888888 999999999999999999999999965 899999999999999998 44433
Q ss_pred HHHHHHHHHHhc
Q 038300 352 EEMARVIKEVVM 363 (401)
Q Consensus 352 ~~l~~~i~~~l~ 363 (401)
++.+++.++++
T Consensus 303 -~~~~~~~~~~~ 313 (321)
T TIGR00661 303 -RLLEAILDIRN 313 (321)
T ss_pred -HHHHHHHhccc
Confidence 55555555555
No 32
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.61 E-value=5.4e-13 Score=126.66 Aligned_cols=96 Identities=20% Similarity=0.284 Sum_probs=81.3
Q ss_pred eEEcccCch-hhhcccCCcceEEecCCchhHHHHHHhCCcEEecCC----ccchhhHHHHHHhhCeeeeeeccCCCCCCH
Q 038300 277 MVIEGWAPQ-MKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPM----HVDQPLNARLVEDVGIGLEVRRNKCGRIQR 351 (401)
Q Consensus 277 ~~~~~~~p~-~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~----~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~ 351 (401)
+.+.+|+.+ .++++.+++ +|+|+|.++++||+++|+|+|++|. .+||..|+..+.+.|.|+.+ ...++++
T Consensus 237 v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~---~~~~~~~ 311 (357)
T PRK00726 237 AEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLI---PQSDLTP 311 (357)
T ss_pred EEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEE---EcccCCH
Confidence 677788854 499999999 9999999999999999999999997 47899999999999999999 5566789
Q ss_pred HHHHHHHHHHhcCcccHHHHHHHHHHHHH
Q 038300 352 EEMARVIKEVVMEREGEKIKRKTREMGEK 380 (401)
Q Consensus 352 ~~l~~~i~~~l~~~~~~~~~~~a~~~~~~ 380 (401)
+++.++|+++++ ++++++...+-+..
T Consensus 312 ~~l~~~i~~ll~---~~~~~~~~~~~~~~ 337 (357)
T PRK00726 312 EKLAEKLLELLS---DPERLEAMAEAARA 337 (357)
T ss_pred HHHHHHHHHHHc---CHHHHHHHHHHHHh
Confidence 999999999998 66666554444433
No 33
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.53 E-value=4.9e-12 Score=119.68 Aligned_cols=90 Identities=20% Similarity=0.296 Sum_probs=76.5
Q ss_pred CceEEcccCch-hhhcccCCcceEEecCCchhHHHHHHhCCcEEecCC----ccchhhHHHHHHhhCeeeeeeccCCCCC
Q 038300 275 RAMVIEGWAPQ-MKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPM----HVDQPLNARLVEDVGIGLEVRRNKCGRI 349 (401)
Q Consensus 275 ~~~~~~~~~p~-~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~----~~dQ~~na~~~~~~g~g~~l~~~~~~~~ 349 (401)
.++.+.+|..+ .++|+.+++ +|+++|.+++.||+++|+|+|+.|. .++|..|+..+.+.|.|+.+ +....
T Consensus 235 ~~v~~~g~~~~~~~~l~~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v---~~~~~ 309 (350)
T cd03785 235 VNYEVFPFIDDMAAAYAAADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLI---PQEEL 309 (350)
T ss_pred CCeEEeehhhhHHHHHHhcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEE---ecCCC
Confidence 57888888843 489999999 9999999999999999999999986 46789999999999999998 44446
Q ss_pred CHHHHHHHHHHHhcCcccHHHHH
Q 038300 350 QREEMARVIKEVVMEREGEKIKR 372 (401)
Q Consensus 350 ~~~~l~~~i~~~l~~~~~~~~~~ 372 (401)
+.+++.++|++++. ++..++
T Consensus 310 ~~~~l~~~i~~ll~---~~~~~~ 329 (350)
T cd03785 310 TPERLAAALLELLS---DPERLK 329 (350)
T ss_pred CHHHHHHHHHHHhc---CHHHHH
Confidence 89999999999997 554444
No 34
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.40 E-value=1.8e-13 Score=115.29 Aligned_cols=84 Identities=23% Similarity=0.446 Sum_probs=72.0
Q ss_pred CceEEcccCch-hhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCcc----chhhHHHHHHhhCeeeeeeccCCCCC
Q 038300 275 RAMVIEGWAPQ-MKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHV----DQPLNARLVEDVGIGLEVRRNKCGRI 349 (401)
Q Consensus 275 ~~~~~~~~~p~-~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~----dQ~~na~~~~~~g~g~~l~~~~~~~~ 349 (401)
.++.+.+|.++ .++++.+|+ +|||||.+|++|++++|+|+|++|... ||..||..+++.|+|+.+ .....
T Consensus 55 ~~v~~~~~~~~m~~~m~~aDl--vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~---~~~~~ 129 (167)
T PF04101_consen 55 PNVKVFGFVDNMAELMAAADL--VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML---DESEL 129 (167)
T ss_dssp CCCEEECSSSSHHHHHHHHSE--EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS---ECCC-
T ss_pred CcEEEEechhhHHHHHHHcCE--EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc---CcccC
Confidence 47888999994 599999999 999999999999999999999999987 999999999999999988 55667
Q ss_pred CHHHHHHHHHHHhc
Q 038300 350 QREEMARVIKEVVM 363 (401)
Q Consensus 350 ~~~~l~~~i~~~l~ 363 (401)
+.+.|.++|.+++.
T Consensus 130 ~~~~L~~~i~~l~~ 143 (167)
T PF04101_consen 130 NPEELAEAIEELLS 143 (167)
T ss_dssp SCCCHHHHHHCHCC
T ss_pred CHHHHHHHHHHHHc
Confidence 78999999999997
No 35
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.34 E-value=4.6e-10 Score=106.10 Aligned_cols=89 Identities=25% Similarity=0.396 Sum_probs=73.0
Q ss_pred chhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCc---cchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHH
Q 038300 284 PQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMH---VDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKE 360 (401)
Q Consensus 284 p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~---~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~ 360 (401)
+-.++|+.+++ +|+++|.+++.||+++|+|+|+.|.. ++|..|+..+++.|.|..+ ..++.+.+++.++|++
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~---~~~~~~~~~l~~~i~~ 317 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVI---RQKELLPEKLLEALLK 317 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEE---ecccCCHHHHHHHHHH
Confidence 34589999999 99999988999999999999999873 5778899999999999988 5566689999999999
Q ss_pred HhcCcccHHHHHHHHHHHHHHHh
Q 038300 361 VVMEREGEKIKRKTREMGEKIKE 383 (401)
Q Consensus 361 ~l~~~~~~~~~~~a~~~~~~~~~ 383 (401)
+++ +++++ +++++..++
T Consensus 318 ll~---~~~~~---~~~~~~~~~ 334 (348)
T TIGR01133 318 LLL---DPANL---EAMAEAARK 334 (348)
T ss_pred HHc---CHHHH---HHHHHHHHh
Confidence 998 55544 445555554
No 36
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.31 E-value=6.1e-10 Score=106.63 Aligned_cols=111 Identities=22% Similarity=0.292 Sum_probs=85.7
Q ss_pred CceEEcccCchh-hhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchh-hHHHHHHhhCeeeeeeccCCCCCCHH
Q 038300 275 RAMVIEGWAPQM-KILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQP-LNARLVEDVGIGLEVRRNKCGRIQRE 352 (401)
Q Consensus 275 ~~~~~~~~~p~~-~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~-~na~~~~~~g~g~~l~~~~~~~~~~~ 352 (401)
.++.+.+|+++. ++++.+|+ +|+.+|.+|+.||+++|+|+|+.+....|. .|+..+.+.|.|+.+ -+++
T Consensus 265 ~~v~~~G~~~~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~-------~~~~ 335 (382)
T PLN02605 265 IPVKVRGFVTNMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDNGFGAFS-------ESPK 335 (382)
T ss_pred CCeEEEeccccHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhCCceeec-------CCHH
Confidence 357788899876 99999999 999999999999999999999998766665 599999999999865 3789
Q ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc-HHHHHHHHHHHHhh
Q 038300 353 EMARVIKEVVMEREGEKIKRKTREMGEKIKEKG-EEEIEWVADELIHL 399 (401)
Q Consensus 353 ~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~~~~ 399 (401)
++.++|.+++.+ +++ ..++|++..++.. ..+..++++.+.++
T Consensus 336 ~la~~i~~ll~~--~~~---~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 336 EIARIVAEWFGD--KSD---ELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HHHHHHHHHHcC--CHH---HHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 999999999973 233 3445666666644 44455555555443
No 37
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=99.27 E-value=5.4e-10 Score=100.05 Aligned_cols=305 Identities=17% Similarity=0.189 Sum_probs=166.8
Q ss_pred CCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhcCCCE
Q 038300 2 SNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNLSPDL 81 (401)
Q Consensus 2 rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~ 81 (401)
+|++|+++++.....-..- +.|+.|+.+| ++.....+.....+..-+ +.+..+.-.+-+....+..+||+
T Consensus 40 ~~~~Il~IsG~~~~~~F~~----~~gVd~V~LP--sl~k~~~G~~~~~d~~~~----l~e~~~~Rs~lil~t~~~fkPDi 109 (400)
T COG4671 40 LGFDILIISGGPPAGGFPG----PAGVDFVKLP--SLIKGDNGEYGLVDLDGD----LEETKKLRSQLILSTAETFKPDI 109 (400)
T ss_pred cCceEEEEeCCCccCCCCC----cccCceEecC--ceEecCCCceeeeecCCC----HHHHHHHHHHHHHHHHHhcCCCE
Confidence 5899999998877655444 2499999885 332222222222222112 22233322445777788899999
Q ss_pred EEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCCCCCCCCCCCCCccccccccccccCCCCCCchHHH
Q 038300 82 LIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDEEFPSSSIFIHDYYMKSYFSNMVESPTTK 161 (401)
Q Consensus 82 vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (401)
+|+|.+ +.|. ..|-+ | ...+.....+. + .-.++. ..+.+.... ..+ . ..
T Consensus 110 ~IVd~~-P~Gl-r~EL~--p-------------tL~yl~~~~t~---~--vL~lr~--i~D~p~~~~--~~w---~--~~ 158 (400)
T COG4671 110 FIVDKF-PFGL-RFELL--P-------------TLEYLKTTGTR---L--VLGLRS--IRDIPQELE--ADW---R--RA 158 (400)
T ss_pred EEEecc-ccch-hhhhh--H-------------HHHHHhhcCCc---c--eeehHh--hhhchhhhc--cch---h--hh
Confidence 999977 5551 01100 0 00000000000 0 000000 001111111 000 1 01
Q ss_pred HHHHHhhccccEEEEcChhHhhHHHHHH-HHhhcCCCeeeecccCCCC-CCCC------cccchHhhhhhHhCCCHHHHH
Q 038300 162 RLLQCFERSCNIVLIKSFRELEGKYIDY-LSDLIKKKVVPVGPLVQDP-VEQT------DHEKGATEIIHEYFLSKEEME 233 (401)
Q Consensus 162 ~~~~~~~~~a~~~Lvns~~eLe~~~~~~-~~~~~~~~v~~vGPl~~~~-~~~~------~~~~~~~~~l~~~~~~~~~~~ 233 (401)
.....+.+.-|.+++..-+++-.+.-.+ +.+....+++++|-+ ..+ ...+ ++...+.---..+..+.+.+.
T Consensus 159 ~~~~~I~r~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~v-q~~~~~~~~p~~~~pE~~~Ilvs~GGG~dG~eLi~ 237 (400)
T COG4671 159 ETVRLINRFYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFV-QRSLPHLPLPPHEAPEGFDILVSVGGGADGAELIE 237 (400)
T ss_pred HHHHHHHHhheEEEEecCccccChhhcCCccHhhhhheeEeEEe-eccCcCCCCCCcCCCccceEEEecCCChhhHHHHH
Confidence 1222233336778888876665422211 112233578899988 211 1000 110000000002223333444
Q ss_pred HHHHHHHh-CCCc--eEEeecCCCCCCCcccccCchhHHHhh-----cCCceEEcccCchh-hhcccCCcceEEecCCch
Q 038300 234 DIALGLEL-SGVN--FIWVVRFPCGAKVKVDEELPESFLERT-----KERAMVIEGWAPQM-KILGHPSIGGFVSHCGWS 304 (401)
Q Consensus 234 ~~~~~l~~-~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~p~~-~~l~~~~~~~~i~hgG~~ 304 (401)
..+.+-.. .+.+ -+.++|+. +|.....+. +.+++.+..|-.+. .++..++. +||-||+|
T Consensus 238 ~~l~A~~~l~~l~~~~~ivtGP~----------MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~--vVSm~GYN 305 (400)
T COG4671 238 TALAAAQLLAGLNHKWLIVTGPF----------MPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL--VVSMGGYN 305 (400)
T ss_pred HHHHHhhhCCCCCcceEEEeCCC----------CCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--eeecccch
Confidence 44433322 3333 44445542 554333322 24788888888775 99999999 99999999
Q ss_pred hHHHHHHhCCcEEecCCc---cchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhc
Q 038300 305 SVMESMRLGVPIIAMPMH---VDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 305 s~~eal~~GvP~i~~P~~---~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
|++|-+++|+|.+++|.. .+|-.-|.|++++|..-.+ ..+.++++.+.++|...+.
T Consensus 306 TvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL---~pe~lt~~~La~al~~~l~ 364 (400)
T COG4671 306 TVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVL---LPENLTPQNLADALKAALA 364 (400)
T ss_pred hhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceee---CcccCChHHHHHHHHhccc
Confidence 999999999999999984 5899999999999998878 6788999999999998886
No 38
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.27 E-value=5.6e-10 Score=107.17 Aligned_cols=80 Identities=19% Similarity=0.360 Sum_probs=71.4
Q ss_pred CceEEcccCchh-hhcccCCcceEEecCCchhHHHHHHhCCcEEec-CCccchhhHHHHHHhhCeeeeeeccCCCCCCHH
Q 038300 275 RAMVIEGWAPQM-KILGHPSIGGFVSHCGWSSVMESMRLGVPIIAM-PMHVDQPLNARLVEDVGIGLEVRRNKCGRIQRE 352 (401)
Q Consensus 275 ~~~~~~~~~p~~-~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~-P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~ 352 (401)
.++.+.+|.++. ++++.+|+ +|+..|..|+.||+++|+|+|+. |..++|..|+..+.+.|+|+.. . +.+
T Consensus 256 ~~v~~~G~~~~~~~~~~~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~---~----~~~ 326 (391)
T PRK13608 256 ENVLILGYTKHMNEWMASSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA---D----TPE 326 (391)
T ss_pred CCeEEEeccchHHHHHHhhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe---C----CHH
Confidence 467888899776 89999999 99998888999999999999998 7777778999999999999877 2 688
Q ss_pred HHHHHHHHHhc
Q 038300 353 EMARVIKEVVM 363 (401)
Q Consensus 353 ~l~~~i~~~l~ 363 (401)
++.++|.++++
T Consensus 327 ~l~~~i~~ll~ 337 (391)
T PRK13608 327 EAIKIVASLTN 337 (391)
T ss_pred HHHHHHHHHhc
Confidence 99999999997
No 39
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.18 E-value=3.7e-09 Score=101.26 Aligned_cols=122 Identities=17% Similarity=0.255 Sum_probs=88.0
Q ss_pred HHHHHHHHHh-CCCceEEeecCCCCCCCcccccCchhHHHhhc--CCceEEcccCchh-hhcccCCcceEEecCCchhHH
Q 038300 232 MEDIALGLEL-SGVNFIWVVRFPCGAKVKVDEELPESFLERTK--ERAMVIEGWAPQM-KILGHPSIGGFVSHCGWSSVM 307 (401)
Q Consensus 232 ~~~~~~~l~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~-~~l~~~~~~~~i~hgG~~s~~ 307 (401)
+..+++++.+ .+.+++++.+.+. .+-+.+.+... +.++.+.+|+++. ++++.+++ +|+.+|..++.
T Consensus 218 ~~~li~~l~~~~~~~~viv~G~~~--------~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~~aD~--~v~~~gg~t~~ 287 (380)
T PRK13609 218 VKELCQSLMSVPDLQVVVVCGKNE--------ALKQSLEDLQETNPDALKVFGYVENIDELFRVTSC--MITKPGGITLS 287 (380)
T ss_pred HHHHHHHHhhCCCcEEEEEeCCCH--------HHHHHHHHHHhcCCCcEEEEechhhHHHHHHhccE--EEeCCCchHHH
Confidence 3455555543 3567777655320 01112222111 2478888999876 89999998 99999988999
Q ss_pred HHHHhCCcEEec-CCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcccHHHHHH
Q 038300 308 ESMRLGVPIIAM-PMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMEREGEKIKRK 373 (401)
Q Consensus 308 eal~~GvP~i~~-P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~ 373 (401)
||+++|+|+|+. |..+.+..|+..+.+.|+|+.. -+.+++.++|.++++ +++.+++
T Consensus 288 EA~a~g~PvI~~~~~~g~~~~n~~~~~~~G~~~~~-------~~~~~l~~~i~~ll~---~~~~~~~ 344 (380)
T PRK13609 288 EAAALGVPVILYKPVPGQEKENAMYFERKGAAVVI-------RDDEEVFAKTEALLQ---DDMKLLQ 344 (380)
T ss_pred HHHHhCCCEEECCCCCCcchHHHHHHHhCCcEEEE-------CCHHHHHHHHHHHHC---CHHHHHH
Confidence 999999999995 7778888999999989999865 257999999999998 5554433
No 40
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.08 E-value=5.1e-09 Score=95.48 Aligned_cols=88 Identities=14% Similarity=0.164 Sum_probs=66.2
Q ss_pred HHHHHHHHh--CCCceEEeecCCCCCCCcccccCchhHHHhh-cCCceEEcccCchh-hhcccCCcceEEecCCchhHHH
Q 038300 233 EDIALGLEL--SGVNFIWVVRFPCGAKVKVDEELPESFLERT-KERAMVIEGWAPQM-KILGHPSIGGFVSHCGWSSVME 308 (401)
Q Consensus 233 ~~~~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~-~~l~~~~~~~~i~hgG~~s~~e 308 (401)
..++++|.+ .+.++.+++|... ...+.+.+.. ...|+.+..|++++ ++|+.+++ +||+|| +|++|
T Consensus 187 ~~~l~~l~~~~~~~~i~vv~G~~~--------~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aDl--~Is~~G-~T~~E 255 (279)
T TIGR03590 187 LKLLSALAESQINISITLVTGSSN--------PNLDELKKFAKEYPNIILFIDVENMAELMNEADL--AIGAAG-STSWE 255 (279)
T ss_pred HHHHHHHhccccCceEEEEECCCC--------cCHHHHHHHHHhCCCEEEEeCHHHHHHHHHHCCE--EEECCc-hHHHH
Confidence 344455543 3467777877531 1122333322 23578888999987 99999999 999999 99999
Q ss_pred HHHhCCcEEecCCccchhhHHHH
Q 038300 309 SMRLGVPIIAMPMHVDQPLNARL 331 (401)
Q Consensus 309 al~~GvP~i~~P~~~dQ~~na~~ 331 (401)
+++.|+|+|++|...+|..||+.
T Consensus 256 ~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 256 RCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred HHHcCCCEEEEEecccHHHHhhh
Confidence 99999999999999999999985
No 41
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.93 E-value=4.8e-08 Score=93.44 Aligned_cols=101 Identities=11% Similarity=0.091 Sum_probs=77.2
Q ss_pred hhhcccCCcceEEecCCchhHHHHHHhCCcEEec----CCc---c------chhhHHHHHHhhCeeeeeeccCCCCCCHH
Q 038300 286 MKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAM----PMH---V------DQPLNARLVEDVGIGLEVRRNKCGRIQRE 352 (401)
Q Consensus 286 ~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~----P~~---~------dQ~~na~~~~~~g~g~~l~~~~~~~~~~~ 352 (401)
..+++.+|+ +|+.+|..|+ |++++|+|+|++ |+. + .|..|+..+.+.++...+ .+++++++
T Consensus 262 ~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel---~q~~~~~~ 335 (385)
T TIGR00215 262 RKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPEL---LQEECTPH 335 (385)
T ss_pred HHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhh---cCCCCCHH
Confidence 479999999 9999999887 999999999999 873 1 277899999999999888 67889999
Q ss_pred HHHHHHHHHhcCc----c-cHHHHHHHHHHHHHHHhhc-HHHHHHH
Q 038300 353 EMARVIKEVVMER----E-GEKIKRKTREMGEKIKEKG-EEEIEWV 392 (401)
Q Consensus 353 ~l~~~i~~~l~~~----~-~~~~~~~a~~~~~~~~~~~-~~~~~~~ 392 (401)
.|.+++.+++.+. + ...+++..+++.+.+.+.| .+.+++.
T Consensus 336 ~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~ 381 (385)
T TIGR00215 336 PLAIALLLLLENGLKAYKEMHRERQFFEELRQRIYCNADSERAAQA 381 (385)
T ss_pred HHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 9999999999842 1 1244455555555554444 4444443
No 42
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.85 E-value=7.4e-06 Score=77.24 Aligned_cols=87 Identities=21% Similarity=0.252 Sum_probs=65.9
Q ss_pred CCceEEcccCchh---hhcccCCcceEEecCC----chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCC
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVSHCG----WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKC 346 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~hgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~ 346 (401)
..++.+.+|+++. ++++.+++ +|..+. .+++.||+++|+|+|+.+..+ +...+.+.+.|...
T Consensus 246 ~~~v~~~g~~~~~~~~~~~~~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~~~~g~~~----- 314 (364)
T cd03814 246 YPNVHFLGFLDGEELAAAYASADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTDGENGLLV----- 314 (364)
T ss_pred CCcEEEEeccCHHHHHHHHHhCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcCCcceEEc-----
Confidence 4578888888865 68989998 887664 378999999999999988654 44556666888877
Q ss_pred CCCCHHHHHHHHHHHhcCcccHHHHHHH
Q 038300 347 GRIQREEMARVIKEVVMEREGEKIKRKT 374 (401)
Q Consensus 347 ~~~~~~~l~~~i~~~l~~~~~~~~~~~a 374 (401)
..-+.+++.++|.+++. +++.+++.
T Consensus 315 ~~~~~~~l~~~i~~l~~---~~~~~~~~ 339 (364)
T cd03814 315 EPGDAEAFAAALAALLA---DPELRRRM 339 (364)
T ss_pred CCCCHHHHHHHHHHHHc---CHHHHHHH
Confidence 33467889999999998 44444333
No 43
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.84 E-value=3e-07 Score=88.07 Aligned_cols=78 Identities=13% Similarity=0.102 Sum_probs=55.9
Q ss_pred hhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCc--------cchhhH-----HHHHHhhCeeeeeeccCCCCCCHH
Q 038300 286 MKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMH--------VDQPLN-----ARLVEDVGIGLEVRRNKCGRIQRE 352 (401)
Q Consensus 286 ~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~--------~dQ~~n-----a~~~~~~g~g~~l~~~~~~~~~~~ 352 (401)
..+++.+|+ +|+.+|.+++ |++++|+|+|+.|-. .+|..| +..+.+.+++..+ .....+++
T Consensus 256 ~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~ 329 (380)
T PRK00025 256 REAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPEL---LQEEATPE 329 (380)
T ss_pred HHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhh---cCCCCCHH
Confidence 489999999 9999998877 999999999999543 223222 2333333444334 34567899
Q ss_pred HHHHHHHHHhcCcccHHHHH
Q 038300 353 EMARVIKEVVMEREGEKIKR 372 (401)
Q Consensus 353 ~l~~~i~~~l~~~~~~~~~~ 372 (401)
++.++|.++++ |++.++
T Consensus 330 ~l~~~i~~ll~---~~~~~~ 346 (380)
T PRK00025 330 KLARALLPLLA---DGARRQ 346 (380)
T ss_pred HHHHHHHHHhc---CHHHHH
Confidence 99999999998 555554
No 44
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.73 E-value=2.4e-07 Score=88.73 Aligned_cols=87 Identities=17% Similarity=0.252 Sum_probs=67.8
Q ss_pred eEEcccCchh-hhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhh----CeeeeeeccCCCCCCH
Q 038300 277 MVIEGWAPQM-KILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDV----GIGLEVRRNKCGRIQR 351 (401)
Q Consensus 277 ~~~~~~~p~~-~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~----g~g~~l~~~~~~~~~~ 351 (401)
+.+..+..++ ++++.+++ +|+.+|..| .|++..|+|+|++|+.++|. ||..+++. |.++.+ . ..+.
T Consensus 281 ~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l---~--~~~~ 351 (396)
T TIGR03492 281 LEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFL---A--SKNP 351 (396)
T ss_pred eEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEec---C--CCCH
Confidence 4444555444 89999999 999999766 99999999999999888886 99887774 777777 2 3456
Q ss_pred HHHHHHHHHHhcCcccHHHHHHHH
Q 038300 352 EEMARVIKEVVMEREGEKIKRKTR 375 (401)
Q Consensus 352 ~~l~~~i~~~l~~~~~~~~~~~a~ 375 (401)
+.+.+++.+++. |+..+++..
T Consensus 352 ~~l~~~l~~ll~---d~~~~~~~~ 372 (396)
T TIGR03492 352 EQAAQVVRQLLA---DPELLERCR 372 (396)
T ss_pred HHHHHHHHHHHc---CHHHHHHHH
Confidence 999999999998 555554433
No 45
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.72 E-value=4.9e-05 Score=74.91 Aligned_cols=118 Identities=15% Similarity=0.142 Sum_probs=76.6
Q ss_pred hCCCHHH-HHHHHHHHHhC-CCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchh---hhcccCCcceEEe
Q 038300 225 YFLSKEE-MEDIALGLELS-GVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQM---KILGHPSIGGFVS 299 (401)
Q Consensus 225 ~~~~~~~-~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~l~~~~~~~~i~ 299 (401)
+.+.++. +..++++++.. +.++++ +|.. . .-+.+++.....++.+.+|+++. .+++.+|+ ||.
T Consensus 270 Grl~~~K~~~~li~a~~~~~~~~l~i-vG~G--~-------~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv--~V~ 337 (465)
T PLN02871 270 GRLGAEKNLDFLKRVMERLPGARLAF-VGDG--P-------YREELEKMFAGTPTVFTGMLQGDELSQAYASGDV--FVM 337 (465)
T ss_pred CCCchhhhHHHHHHHHHhCCCcEEEE-EeCC--h-------HHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCE--EEE
Confidence 3444433 55566666654 456554 4421 1 11334433445578888999754 78889999 885
Q ss_pred cCC----chhHHHHHHhCCcEEecCCccchhhHHHHHHh---hCeeeeeeccCCCCCCHHHHHHHHHHHhc
Q 038300 300 HCG----WSSVMESMRLGVPIIAMPMHVDQPLNARLVED---VGIGLEVRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 300 hgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~---~g~g~~l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
-.. -+++.||+++|+|+|+....+ ....+.+ .+.|+.+ +. -+.+++.++|.++++
T Consensus 338 pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~~~G~lv---~~--~d~~~la~~i~~ll~ 399 (465)
T PLN02871 338 PSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEGKTGFLY---TP--GDVDDCVEKLETLLA 399 (465)
T ss_pred CCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCCCceEEe---CC--CCHHHHHHHHHHHHh
Confidence 443 346899999999999876543 2334444 5788888 32 368999999999998
No 46
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.59 E-value=9.9e-05 Score=70.80 Aligned_cols=79 Identities=19% Similarity=0.269 Sum_probs=60.2
Q ss_pred CCceEEcccCchh---hhcccCCcceEEecCC----chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCC
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVSHCG----WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKC 346 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~hgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~ 346 (401)
..++.+.+|+|+. .+++.+++ ++..+- -.++.||+++|+|+|+-...+ +...+.+.+.|..+ +
T Consensus 282 ~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~~~~g~~~---~- 351 (398)
T cd03800 282 IDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVDGVTGLLV---D- 351 (398)
T ss_pred CceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccCCCCeEEe---C-
Confidence 3578888999875 56888998 774322 358999999999999877544 44456666789887 2
Q ss_pred CCCCHHHHHHHHHHHhc
Q 038300 347 GRIQREEMARVIKEVVM 363 (401)
Q Consensus 347 ~~~~~~~l~~~i~~~l~ 363 (401)
.-+.+++.++|.++++
T Consensus 352 -~~~~~~l~~~i~~l~~ 367 (398)
T cd03800 352 -PRDPEALAAALRRLLT 367 (398)
T ss_pred -CCCHHHHHHHHHHHHh
Confidence 2368999999999997
No 47
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.59 E-value=5.2e-05 Score=73.79 Aligned_cols=75 Identities=16% Similarity=0.252 Sum_probs=57.8
Q ss_pred hhcccCCcceEEec-----CCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHH
Q 038300 287 KILGHPSIGGFVSH-----CGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEV 361 (401)
Q Consensus 287 ~~l~~~~~~~~i~h-----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~ 361 (401)
.+++.+++ ++.. +|..++.||+++|+|+|+-|..+++......+.+.|+++.. -+.+++.++|.++
T Consensus 315 ~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~-------~d~~~La~~l~~l 385 (425)
T PRK05749 315 LLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQV-------EDAEDLAKAVTYL 385 (425)
T ss_pred HHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEE-------CCHHHHHHHHHHH
Confidence 78888887 4431 23346999999999999999988888888877777877665 2579999999999
Q ss_pred hcCcccHHHHHH
Q 038300 362 VMEREGEKIKRK 373 (401)
Q Consensus 362 l~~~~~~~~~~~ 373 (401)
++ ++..+++
T Consensus 386 l~---~~~~~~~ 394 (425)
T PRK05749 386 LT---DPDARQA 394 (425)
T ss_pred hc---CHHHHHH
Confidence 98 5544433
No 48
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.50 E-value=9.1e-05 Score=69.55 Aligned_cols=79 Identities=23% Similarity=0.266 Sum_probs=59.1
Q ss_pred CCceEEcccCchh---hhcccCCcceEEec----CCc-hhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccC
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVSH----CGW-SSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNK 345 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~h----gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~ 345 (401)
..++.+.+|+++. .+++.+++ +|.. .|+ .++.||+++|+|+|+.+.. .+...+.+.+.|..+ .
T Consensus 242 ~~~v~~~g~~~~~~~~~~~~~ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~~~g~~~---~ 312 (359)
T cd03823 242 DPRVEFLGAYPQEEIDDFYAEIDV--LVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELVRDGVNGLLF---P 312 (359)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHhcCCCcEEEE---C
Confidence 4578888999754 67889998 6632 333 4799999999999997654 345556665678887 2
Q ss_pred CCCCCHHHHHHHHHHHhc
Q 038300 346 CGRIQREEMARVIKEVVM 363 (401)
Q Consensus 346 ~~~~~~~~l~~~i~~~l~ 363 (401)
. -+.+++.++|.++++
T Consensus 313 ~--~d~~~l~~~i~~l~~ 328 (359)
T cd03823 313 P--GDAEDLAAALERLID 328 (359)
T ss_pred C--CCHHHHHHHHHHHHh
Confidence 2 358999999999998
No 49
>PRK10307 putative glycosyl transferase; Provisional
Probab=98.44 E-value=0.00077 Score=65.30 Aligned_cols=80 Identities=19% Similarity=0.189 Sum_probs=57.7
Q ss_pred CceEEcccCchh---hhcccCCcceEEecCCc------hhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccC
Q 038300 275 RAMVIEGWAPQM---KILGHPSIGGFVSHCGW------SSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNK 345 (401)
Q Consensus 275 ~~~~~~~~~p~~---~~l~~~~~~~~i~hgG~------~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~ 345 (401)
.++.+.+|+|+. ++++.+++..+.+..+. +.+.|++++|+|+|+....+.. ....+. +.|+.+ +
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i~--~~G~~~---~ 356 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLVE--GIGVCV---E 356 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHHh--CCcEEe---C
Confidence 468888898865 67889999666666443 2478999999999998765421 112222 678877 2
Q ss_pred CCCCCHHHHHHHHHHHhc
Q 038300 346 CGRIQREEMARVIKEVVM 363 (401)
Q Consensus 346 ~~~~~~~~l~~~i~~~l~ 363 (401)
.-+.+++.++|.++++
T Consensus 357 --~~d~~~la~~i~~l~~ 372 (412)
T PRK10307 357 --PESVEALVAAIAALAR 372 (412)
T ss_pred --CCCHHHHHHHHHHHHh
Confidence 3468999999999997
No 50
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.44 E-value=0.00025 Score=67.18 Aligned_cols=80 Identities=24% Similarity=0.258 Sum_probs=58.5
Q ss_pred cCCceEEcccCchh---hhcccCCcceEEecCC---------chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeee
Q 038300 273 KERAMVIEGWAPQM---KILGHPSIGGFVSHCG---------WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLE 340 (401)
Q Consensus 273 ~~~~~~~~~~~p~~---~~l~~~~~~~~i~hgG---------~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~ 340 (401)
...++.+.+++++. +++..+++ +|.... -+++.||+++|+|+|+.+..+.+... .+.+.|..
T Consensus 273 ~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~----~~~~~g~~ 346 (394)
T cd03794 273 GLDNVTFLGRVPKEELPELLAAADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELV----EEAGAGLV 346 (394)
T ss_pred CCCcEEEeCCCChHHHHHHHHhhCe--eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhh----ccCCcceE
Confidence 34578888888765 67888998 654322 23479999999999999887655433 23367777
Q ss_pred eeccCCCCCCHHHHHHHHHHHhc
Q 038300 341 VRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 341 l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
+ . .-+.+++.++|.+++.
T Consensus 347 ~---~--~~~~~~l~~~i~~~~~ 364 (394)
T cd03794 347 V---P--PGDPEALAAAILELLD 364 (394)
T ss_pred e---C--CCCHHHHHHHHHHHHh
Confidence 7 2 2378999999999997
No 51
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.40 E-value=0.00063 Score=65.55 Aligned_cols=81 Identities=16% Similarity=0.182 Sum_probs=57.9
Q ss_pred CCceEEcccCchh---hhcccCCcceEEec-CCc-hhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCC
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVSH-CGW-SSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGR 348 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~h-gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~ 348 (401)
..++.+.+++|+. .+|+.+++-++.+. .|. .++.||+++|+|+|+-... -+...+.+...|+.+ +.
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~----g~~e~i~~~~~G~lv-----~~ 350 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTA----PVREVITDGENGLLV-----DF 350 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCC----CchhhcccCCceEEc-----CC
Confidence 4578888999875 57788898333333 222 3799999999999986543 344455555578777 23
Q ss_pred CCHHHHHHHHHHHhc
Q 038300 349 IQREEMARVIKEVVM 363 (401)
Q Consensus 349 ~~~~~l~~~i~~~l~ 363 (401)
-+.+++.++|.++++
T Consensus 351 ~d~~~la~~i~~ll~ 365 (396)
T cd03818 351 FDPDALAAAVIELLD 365 (396)
T ss_pred CCHHHHHHHHHHHHh
Confidence 468999999999998
No 52
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.37 E-value=0.00036 Score=65.24 Aligned_cols=112 Identities=17% Similarity=0.285 Sum_probs=75.2
Q ss_pred ceEEcccCchh-hhcccCCc----ceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCC
Q 038300 276 AMVIEGWAPQM-KILGHPSI----GGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQ 350 (401)
Q Consensus 276 ~~~~~~~~p~~-~~l~~~~~----~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~ 350 (401)
++++.+-+--+ .++.-+++ |-|+-+||+| ..|.+++|+|+|.=|+...|.+-++++.+.|+|+.+ + +
T Consensus 301 dV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v-----~--~ 372 (419)
T COG1519 301 DVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQV-----E--D 372 (419)
T ss_pred cEEEEecHhHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEE-----C--C
Confidence 45555444332 44444443 1245699998 899999999999999999999999999999999999 2 2
Q ss_pred HHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHh
Q 038300 351 REEMARVIKEVVMEREGEKIKRKTREMGEKIKEKGEEEIEWVADELIH 398 (401)
Q Consensus 351 ~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~v~~~~~ 398 (401)
.+.+.+++..+++ ++..|++..+-+..+-+....+.++.++.+..
T Consensus 373 ~~~l~~~v~~l~~---~~~~r~~~~~~~~~~v~~~~gal~r~l~~l~~ 417 (419)
T COG1519 373 ADLLAKAVELLLA---DEDKREAYGRAGLEFLAQNRGALARTLEALKP 417 (419)
T ss_pred HHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhh
Confidence 7889999988887 44444444333333333222255555555543
No 53
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.36 E-value=0.00044 Score=65.16 Aligned_cols=78 Identities=19% Similarity=0.323 Sum_probs=57.6
Q ss_pred CCceEEcccCchh---hhcccCCcceEEecC----CchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCC
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVSHC----GWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKC 346 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~hg----G~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~ 346 (401)
..++.+.+++|+. .++..+++ +|..+ .-+++.||+++|+|+|+.... ..+..+.+.+.|..+ ..
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~----~~~~~i~~~~~g~~~---~~ 328 (374)
T cd03817 258 ADRVIFTGFVPREELPDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDAP----GLPDLVADGENGFLF---PP 328 (374)
T ss_pred CCcEEEeccCChHHHHHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCCC----ChhhheecCceeEEe---CC
Confidence 4578888999875 67888998 66443 246899999999999987643 345555666788877 22
Q ss_pred CCCCHHHHHHHHHHHhc
Q 038300 347 GRIQREEMARVIKEVVM 363 (401)
Q Consensus 347 ~~~~~~~l~~~i~~~l~ 363 (401)
. +. ++.++|.++++
T Consensus 329 ~--~~-~~~~~i~~l~~ 342 (374)
T cd03817 329 G--DE-ALAEALLRLLQ 342 (374)
T ss_pred C--CH-HHHHHHHHHHh
Confidence 2 22 89999999998
No 54
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.34 E-value=0.00052 Score=65.18 Aligned_cols=78 Identities=19% Similarity=0.212 Sum_probs=57.2
Q ss_pred CceEEcccCchh-hhcccCCcceEEec----CCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCC
Q 038300 275 RAMVIEGWAPQM-KILGHPSIGGFVSH----CGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRI 349 (401)
Q Consensus 275 ~~~~~~~~~p~~-~~l~~~~~~~~i~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~ 349 (401)
.++.+.++.++. +++..+++ +|.- +.-.++.||+++|+|+|+.... ..+..+.+...|..+ + .-
T Consensus 253 ~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i~~~~~G~~~---~--~~ 321 (371)
T cd04962 253 DDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVVKHGETGFLV---D--VG 321 (371)
T ss_pred ceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCCC----CchhhhcCCCceEEc---C--CC
Confidence 457777777665 88989988 6632 2245999999999999996554 345555555677766 2 23
Q ss_pred CHHHHHHHHHHHhc
Q 038300 350 QREEMARVIKEVVM 363 (401)
Q Consensus 350 ~~~~l~~~i~~~l~ 363 (401)
+.+++.++|.++++
T Consensus 322 ~~~~l~~~i~~l~~ 335 (371)
T cd04962 322 DVEAMAEYALSLLE 335 (371)
T ss_pred CHHHHHHHHHHHHh
Confidence 68999999999997
No 55
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.31 E-value=0.00044 Score=64.25 Aligned_cols=89 Identities=19% Similarity=0.349 Sum_probs=61.6
Q ss_pred CceEEcccCchh-hhcccCCcceEEecCC----chhHHHHHHhCCcEEecCCccchhhHHHHHHhhC-eeeeeeccCCCC
Q 038300 275 RAMVIEGWAPQM-KILGHPSIGGFVSHCG----WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVG-IGLEVRRNKCGR 348 (401)
Q Consensus 275 ~~~~~~~~~p~~-~~l~~~~~~~~i~hgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g-~g~~l~~~~~~~ 348 (401)
.++.+.++..+. .++..+++ +|.-+. -+++.||+++|+|+|+.+..+.+. .+...| .|+.+ ..
T Consensus 235 ~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~----~~~~~~~~g~~~-----~~ 303 (348)
T cd03820 235 DRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPS----EIIEDGVNGLLV-----PN 303 (348)
T ss_pred CeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCchH----hhhccCcceEEe-----CC
Confidence 456666663433 88989998 775542 468999999999999876554432 234444 78877 23
Q ss_pred CCHHHHHHHHHHHhcCcccHHHHHHHHHH
Q 038300 349 IQREEMARVIKEVVMEREGEKIKRKTREM 377 (401)
Q Consensus 349 ~~~~~l~~~i~~~l~~~~~~~~~~~a~~~ 377 (401)
.+.+++.++|.++++ +++.+++..+-
T Consensus 304 ~~~~~~~~~i~~ll~---~~~~~~~~~~~ 329 (348)
T cd03820 304 GDVEALAEALLRLME---DEELRKRMGAN 329 (348)
T ss_pred CCHHHHHHHHHHHHc---CHHHHHHHHHH
Confidence 467999999999998 56555544443
No 56
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=98.28 E-value=0.0019 Score=62.28 Aligned_cols=78 Identities=15% Similarity=0.149 Sum_probs=58.0
Q ss_pred CceEEcccCchh---hhcccCCcceEEec---CCc-hhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCC
Q 038300 275 RAMVIEGWAPQM---KILGHPSIGGFVSH---CGW-SSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCG 347 (401)
Q Consensus 275 ~~~~~~~~~p~~---~~l~~~~~~~~i~h---gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~ 347 (401)
.++.+.+++++. ++|+.+++ +|.- -|+ .++.||+++|+|+|+....+ ....+.+.+.|+.+ +
T Consensus 283 ~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i~~~~~g~~~---~-- 351 (405)
T TIGR03449 283 DRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAVADGETGLLV---D-- 351 (405)
T ss_pred ceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhhccCCceEEC---C--
Confidence 468888888764 78999998 6632 233 58999999999999976543 33345555678777 2
Q ss_pred CCCHHHHHHHHHHHhc
Q 038300 348 RIQREEMARVIKEVVM 363 (401)
Q Consensus 348 ~~~~~~l~~~i~~~l~ 363 (401)
.-+.+++.++|.++++
T Consensus 352 ~~d~~~la~~i~~~l~ 367 (405)
T TIGR03449 352 GHDPADWADALARLLD 367 (405)
T ss_pred CCCHHHHHHHHHHHHh
Confidence 2478999999999998
No 57
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=98.26 E-value=0.0026 Score=59.29 Aligned_cols=79 Identities=23% Similarity=0.279 Sum_probs=58.0
Q ss_pred CCceEEcccCchh-hhcccCCcceEEecCC----chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCC
Q 038300 274 ERAMVIEGWAPQM-KILGHPSIGGFVSHCG----WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGR 348 (401)
Q Consensus 274 ~~~~~~~~~~p~~-~~l~~~~~~~~i~hgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~ 348 (401)
..++.+.++..+. ++++.+++ +|.-+. -+++.||+++|+|+|+-+..+ +...+.+.+.|..+ ..
T Consensus 245 ~~~v~~~g~~~~~~~~~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~~~~g~~~-----~~ 313 (359)
T cd03808 245 EGRVEFLGFRDDVPELLAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVIDGVNGFLV-----PP 313 (359)
T ss_pred cceEEEeeccccHHHHHHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhcCcceEEE-----CC
Confidence 3467776765544 88999998 775443 568999999999999976543 34455556778777 23
Q ss_pred CCHHHHHHHHHHHhc
Q 038300 349 IQREEMARVIKEVVM 363 (401)
Q Consensus 349 ~~~~~l~~~i~~~l~ 363 (401)
-+.+++.++|.+++.
T Consensus 314 ~~~~~~~~~i~~l~~ 328 (359)
T cd03808 314 GDAEALADAIERLIE 328 (359)
T ss_pred CCHHHHHHHHHHHHh
Confidence 368999999999887
No 58
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.25 E-value=0.0018 Score=60.76 Aligned_cols=80 Identities=21% Similarity=0.262 Sum_probs=59.9
Q ss_pred CCceEEcccCchh---hhcccCCcceEEec----CCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCC
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVSH----CGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKC 346 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~ 346 (401)
..++.+.+++++. .++..+++ +|.. +.-+++.||+++|+|+|+-+..+ ....+.+.+.|...
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~~~~~~g~~~----- 326 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAADV--FVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEIITDGENGLLV----- 326 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhcCe--eecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHhcCCcceeEE-----
Confidence 4578888999865 77888888 5522 44578999999999999876543 44455666667777
Q ss_pred CCCCHHHHHHHHHHHhcC
Q 038300 347 GRIQREEMARVIKEVVME 364 (401)
Q Consensus 347 ~~~~~~~l~~~i~~~l~~ 364 (401)
..-+.+++.++|.+++++
T Consensus 327 ~~~~~~~l~~~i~~~~~~ 344 (377)
T cd03798 327 PPGDPEALAEAILRLLAD 344 (377)
T ss_pred CCCCHHHHHHHHHHHhcC
Confidence 334789999999999983
No 59
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.25 E-value=0.0016 Score=60.85 Aligned_cols=80 Identities=23% Similarity=0.278 Sum_probs=60.6
Q ss_pred cCCceEEcccCchh---hhcccCCcceEEe----cCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccC
Q 038300 273 KERAMVIEGWAPQM---KILGHPSIGGFVS----HCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNK 345 (401)
Q Consensus 273 ~~~~~~~~~~~p~~---~~l~~~~~~~~i~----hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~ 345 (401)
...++.+.+++++. .++..+++ +|. -+.-+++.||+++|+|+|+.+.. .+...+.+.+.|+.+
T Consensus 254 ~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~----~~~~~~~~~~~g~~~---- 323 (374)
T cd03801 254 LGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDVG----GIPEVVEDGETGLLV---- 323 (374)
T ss_pred CCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCCC----ChhHHhcCCcceEEe----
Confidence 34578888899644 78888998 663 24456899999999999997763 345555556788877
Q ss_pred CCCCCHHHHHHHHHHHhc
Q 038300 346 CGRIQREEMARVIKEVVM 363 (401)
Q Consensus 346 ~~~~~~~~l~~~i~~~l~ 363 (401)
...+.+++.++|.+++.
T Consensus 324 -~~~~~~~l~~~i~~~~~ 340 (374)
T cd03801 324 -PPGDPEALAEAILRLLD 340 (374)
T ss_pred -CCCCHHHHHHHHHHHHc
Confidence 23358999999999998
No 60
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.22 E-value=0.0033 Score=59.16 Aligned_cols=80 Identities=19% Similarity=0.183 Sum_probs=55.4
Q ss_pred CceEEcccCchh-hhcccCCcceEEec--CC-chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCC
Q 038300 275 RAMVIEGWAPQM-KILGHPSIGGFVSH--CG-WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQ 350 (401)
Q Consensus 275 ~~~~~~~~~p~~-~~l~~~~~~~~i~h--gG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~ 350 (401)
.++.+.+|.++. .+++.+++..+-++ -| -+++.||+++|+|+|+.-..+ +...+.+.+.|..+ . .-+
T Consensus 246 ~~v~~~g~~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~----~~e~i~~~~~g~~~---~--~~~ 316 (355)
T cd03819 246 DRVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG----ARETVRPGETGLLV---P--PGD 316 (355)
T ss_pred ceEEEcCCcccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC----cHHHHhCCCceEEe---C--CCC
Confidence 467888885544 88999999333331 12 359999999999999876433 34445555678877 2 347
Q ss_pred HHHHHHHHHHHhc
Q 038300 351 REEMARVIKEVVM 363 (401)
Q Consensus 351 ~~~l~~~i~~~l~ 363 (401)
.+++.++|..++.
T Consensus 317 ~~~l~~~i~~~~~ 329 (355)
T cd03819 317 AEALAQALDQILS 329 (355)
T ss_pred HHHHHHHHHHHHh
Confidence 8999999976654
No 61
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.18 E-value=1.2e-05 Score=63.51 Aligned_cols=98 Identities=18% Similarity=0.199 Sum_probs=68.0
Q ss_pred HHHHHHhCCC-ceEEeecCCCCCCCcccccCchhHHHhhcCCc--eEEcccCch-hhhcccCCcceEEecCCchhHHHHH
Q 038300 235 IALGLELSGV-NFIWVVRFPCGAKVKVDEELPESFLERTKERA--MVIEGWAPQ-MKILGHPSIGGFVSHCGWSSVMESM 310 (401)
Q Consensus 235 ~~~~l~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~-~~~l~~~~~~~~i~hgG~~s~~eal 310 (401)
.++.|.+.|+ +.+...|...- ..++....-....+ +...+|-|. .+.++.+++ +|+|+|+||++|.+
T Consensus 27 ~~~~L~k~G~~kLiiQ~Grg~~-------~~~d~~~~~~k~~gl~id~y~f~psl~e~I~~Adl--VIsHAGaGS~letL 97 (170)
T KOG3349|consen 27 FLQELQKRGFTKLIIQIGRGQP-------FFGDPIDLIRKNGGLTIDGYDFSPSLTEDIRSADL--VISHAGAGSCLETL 97 (170)
T ss_pred HHHHHHHcCccEEEEEecCCcc-------CCCCHHHhhcccCCeEEEEEecCccHHHHHhhccE--EEecCCcchHHHHH
Confidence 3455666675 56677765310 01221211112223 344567887 488888999 99999999999999
Q ss_pred HhCCcEEecCC----ccchhhHHHHHHhhCeeeee
Q 038300 311 RLGVPIIAMPM----HVDQPLNARLVEDVGIGLEV 341 (401)
Q Consensus 311 ~~GvP~i~~P~----~~dQ~~na~~~~~~g~g~~l 341 (401)
..|+|.|+++- ..+|-.-|..+++.|-=..=
T Consensus 98 ~l~KPlivVvNd~LMDNHQ~ELA~qL~~egyL~~C 132 (170)
T KOG3349|consen 98 RLGKPLIVVVNDSLMDNHQLELAKQLAEEGYLYYC 132 (170)
T ss_pred HcCCCEEEEeChHhhhhHHHHHHHHHHhcCcEEEe
Confidence 99999999996 47899999999998765543
No 62
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.15 E-value=0.0013 Score=61.05 Aligned_cols=276 Identities=16% Similarity=0.158 Sum_probs=136.0
Q ss_pred CCCeEEEEEeCCccc--hhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhcC
Q 038300 1 GSNFHICFCSTPSIL--NSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNLS 78 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~--~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 78 (401)
++||+|.+.+-+... +.++.. |+.+..+- -. + ......+...... .-.+.+++++.+
T Consensus 25 ~~GheV~it~R~~~~~~~LL~~y-----g~~y~~iG------~~-g--------~~~~~Kl~~~~~R-~~~l~~~~~~~~ 83 (335)
T PF04007_consen 25 KRGHEVLITARDKDETEELLDLY-----GIDYIVIG------KH-G--------DSLYGKLLESIER-QYKLLKLIKKFK 83 (335)
T ss_pred hCCCEEEEEEeccchHHHHHHHc-----CCCeEEEc------CC-C--------CCHHHHHHHHHHH-HHHHHHHHHhhC
Confidence 479999988754432 233444 88888773 00 1 1222333333333 345777778889
Q ss_pred CCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCCCCCCCCCCCCCccccccccccccCCCCCCch
Q 038300 79 PDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDEEFPSSSIFIHDYYMKSYFSNMVESP 158 (401)
Q Consensus 79 pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (401)
||++|+-.- +.+..+|.-+|+|+|.|.-+.-.... + -..+ |+...-+ .|..+. ..
T Consensus 84 pDv~is~~s-~~a~~va~~lgiP~I~f~D~e~a~~~---~-----~Lt~-Pla~~i~-------~P~~~~--------~~ 138 (335)
T PF04007_consen 84 PDVAISFGS-PEAARVAFGLGIPSIVFNDTEHAIAQ---N-----RLTL-PLADVII-------TPEAIP--------KE 138 (335)
T ss_pred CCEEEecCc-HHHHHHHHHhCCCeEEEecCchhhcc---c-----eeeh-hcCCeeE-------CCcccC--------HH
Confidence 999996433 66778999999999999875322111 0 0001 2221111 000000 00
Q ss_pred HHHHHHH--Hhh---ccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCCCCCCcccchHhhhhhHhCCCHHHHH
Q 038300 159 TTKRLLQ--CFE---RSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDPVEQTDHEKGATEIIHEYFLSKEEME 233 (401)
Q Consensus 159 ~~~~~~~--~~~---~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 233 (401)
...++.. .+. .-..+.-++. +.-++..++.+.-. +.+++.+.|-..... .. .. ....+.
T Consensus 139 ~~~~~G~~~~i~~y~G~~E~ayl~~-F~Pd~~vl~~lg~~-~~~yIvvR~~~~~A~-----------y~-~~--~~~i~~ 202 (335)
T PF04007_consen 139 FLKRFGAKNQIRTYNGYKELAYLHP-FKPDPEVLKELGLD-DEPYIVVRPEAWKAS-----------YD-NG--KKSILP 202 (335)
T ss_pred HHHhcCCcCCEEEECCeeeEEeecC-CCCChhHHHHcCCC-CCCEEEEEeccccCe-----------ee-cC--ccchHH
Confidence 0000000 000 0011111122 12222333333311 234444544322210 00 01 223456
Q ss_pred HHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEE-cccCchhhhcccCCcceEEecCCchhHHHHHHh
Q 038300 234 DIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVI-EGWAPQMKILGHPSIGGFVSHCGWSSVMESMRL 312 (401)
Q Consensus 234 ~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~ 312 (401)
++++.|+..+..+|..-+... .++-+ + .-++.+ ..-+.-.++|.++++ +|+-|| ....||...
T Consensus 203 ~ii~~L~~~~~~vV~ipr~~~---------~~~~~-~---~~~~~i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~L 266 (335)
T PF04007_consen 203 EIIEELEKYGRNVVIIPRYED---------QRELF-E---KYGVIIPPEPVDGLDLLYYADL--VIGGGG-TMAREAALL 266 (335)
T ss_pred HHHHHHHhhCceEEEecCCcc---------hhhHH-h---ccCccccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHh
Confidence 788888877766444433210 11111 1 112322 233444589999999 998666 678999999
Q ss_pred CCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHh
Q 038300 313 GVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVV 362 (401)
Q Consensus 313 GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l 362 (401)
|+|.|.+ +.++-...=+.+.+.|. .. ..-+.+++.+.|+..+
T Consensus 267 GtPaIs~-~~g~~~~vd~~L~~~Gl--l~-----~~~~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 267 GTPAISC-FPGKLLAVDKYLIEKGL--LY-----HSTDPDEIVEYVRKNL 308 (335)
T ss_pred CCCEEEe-cCCcchhHHHHHHHCCC--eE-----ecCCHHHHHHHHHHhh
Confidence 9999985 33442233355667765 33 2346777777665544
No 63
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=98.08 E-value=0.0098 Score=57.70 Aligned_cols=76 Identities=24% Similarity=0.369 Sum_probs=55.4
Q ss_pred ceEEc-ccCchh---hhcccCCcceEEe----cCC---chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeecc
Q 038300 276 AMVIE-GWAPQM---KILGHPSIGGFVS----HCG---WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRN 344 (401)
Q Consensus 276 ~~~~~-~~~p~~---~~l~~~~~~~~i~----hgG---~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~ 344 (401)
+++.. +|+|.. ++|+.+++ +|+ ..| -+++.||+++|+|+|+.... .....+++.+.|+.+
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~----~~~eiv~~~~~G~lv--- 365 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK----CIDELVKHGENGLVF--- 365 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCCC----CHHHHhcCCCCEEEE---
Confidence 55544 577754 77889999 663 112 34799999999999996543 344566666789877
Q ss_pred CCCCCCHHHHHHHHHHHhcC
Q 038300 345 KCGRIQREEMARVIKEVVME 364 (401)
Q Consensus 345 ~~~~~~~~~l~~~i~~~l~~ 364 (401)
. +.+++.++|.+++++
T Consensus 366 ~----d~~~la~~i~~ll~~ 381 (415)
T cd03816 366 G----DSEELAEQLIDLLSN 381 (415)
T ss_pred C----CHHHHHHHHHHHHhc
Confidence 2 689999999999983
No 64
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=98.05 E-value=0.009 Score=58.43 Aligned_cols=78 Identities=17% Similarity=0.236 Sum_probs=55.3
Q ss_pred CceEEcccCchh---hhcccC----CcceEEecC---C-chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeec
Q 038300 275 RAMVIEGWAPQM---KILGHP----SIGGFVSHC---G-WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRR 343 (401)
Q Consensus 275 ~~~~~~~~~p~~---~~l~~~----~~~~~i~hg---G-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~ 343 (401)
.++.+.+++++. ++++.+ ++ ||..+ | -.++.||+++|+|+|+-...+ +...+.+...|+.+
T Consensus 317 ~~V~f~g~~~~~~~~~~~~~a~~~~Dv--~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv~~~~~G~lv-- 388 (439)
T TIGR02472 317 GKVAYPKHHRPDDVPELYRLAARSRGI--FVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDIIANCRNGLLV-- 388 (439)
T ss_pred ceEEecCCCCHHHHHHHHHHHhhcCCE--EecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHhcCCCcEEEe--
Confidence 456666777655 456655 55 87644 3 358999999999999887643 33444444678877
Q ss_pred cCCCCCCHHHHHHHHHHHhc
Q 038300 344 NKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 344 ~~~~~~~~~~l~~~i~~~l~ 363 (401)
. .-+.+++.++|.++++
T Consensus 389 -~--~~d~~~la~~i~~ll~ 405 (439)
T TIGR02472 389 -D--VLDLEAIASALEDALS 405 (439)
T ss_pred -C--CCCHHHHHHHHHHHHh
Confidence 2 3478999999999998
No 65
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.02 E-value=8.7e-05 Score=69.81 Aligned_cols=112 Identities=14% Similarity=0.210 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHhC-CCceEEeecCCCCCCCcccccCchhHHHhhcC-CceEEcccCch---hhhcccCCcceEEecCCch
Q 038300 230 EEMEDIALGLELS-GVNFIWVVRFPCGAKVKVDEELPESFLERTKE-RAMVIEGWAPQ---MKILGHPSIGGFVSHCGWS 304 (401)
Q Consensus 230 ~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~---~~~l~~~~~~~~i~hgG~~ 304 (401)
..+.+++++|.+. ++++||.+..... .-..+.+.+.. .++.+.+-++. ..+|+++++ +|+.+|
T Consensus 200 ~~i~~~l~~L~~~~~~~vi~~~hn~p~--------~~~~i~~~l~~~~~v~~~~~l~~~~~l~ll~~a~~--vvgdSs-- 267 (346)
T PF02350_consen 200 EQILEALKALAERQNVPVIFPLHNNPR--------GSDIIIEKLKKYDNVRLIEPLGYEEYLSLLKNADL--VVGDSS-- 267 (346)
T ss_dssp HHHHHHHHHHHHHTTEEEEEE--S-HH--------HHHHHHHHHTT-TTEEEE----HHHHHHHHHHESE--EEESSH--
T ss_pred HHHHHHHHHHHhcCCCcEEEEecCCch--------HHHHHHHHhcccCCEEEECCCCHHHHHHHHhcceE--EEEcCc--
Confidence 3455556666555 7889998763210 00122222221 37877665554 488889999 999998
Q ss_pred hHH-HHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhc
Q 038300 305 SVM-ESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 305 s~~-eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
++. ||.++|+|.|.+=..++.+.- ...|..+.+ ..++++|.++|++++.
T Consensus 268 GI~eEa~~lg~P~v~iR~~geRqe~----r~~~~nvlv------~~~~~~I~~ai~~~l~ 317 (346)
T PF02350_consen 268 GIQEEAPSLGKPVVNIRDSGERQEG----RERGSNVLV------GTDPEAIIQAIEKALS 317 (346)
T ss_dssp HHHHHGGGGT--EEECSSS-S-HHH----HHTTSEEEE------TSSHHHHHHHHHHHHH
T ss_pred cHHHHHHHhCCeEEEecCCCCCHHH----HhhcceEEe------CCCHHHHHHHHHHHHh
Confidence 566 999999999999333333221 234666666 2689999999999997
No 66
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.01 E-value=0.0016 Score=61.65 Aligned_cols=79 Identities=20% Similarity=0.249 Sum_probs=60.3
Q ss_pred CCceEEcccCchh---hhcccCCcceEEecC----------CchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeee
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVSHC----------GWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLE 340 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~hg----------G~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~ 340 (401)
..++.+.+++|+. .+++.+++ +|.-+ -.+++.||+++|+|+|+-+..+ ++..+.+.+.|..
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~~~~g~~ 317 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVEDGETGLL 317 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheecCCeeEE
Confidence 3568888888764 66888998 66422 2468999999999999877643 5566666788888
Q ss_pred eeccCCCCCCHHHHHHHHHHHhc
Q 038300 341 VRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 341 l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
+ + .-+.+++.++|.++++
T Consensus 318 ~---~--~~d~~~l~~~i~~l~~ 335 (367)
T cd05844 318 V---P--EGDVAALAAALGRLLA 335 (367)
T ss_pred E---C--CCCHHHHHHHHHHHHc
Confidence 7 2 3477999999999998
No 67
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=97.88 E-value=6.8e-06 Score=66.60 Aligned_cols=96 Identities=15% Similarity=0.224 Sum_probs=57.9
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhh--chHHHHHHHhh--
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDM--ASPSFFNILKN-- 76 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~l~~-- 76 (401)
+|||+|++++++.+.+.+++. |+.|++++.+ ..++... .....+...... ....+.+.+++
T Consensus 24 ~rGh~V~~~~~~~~~~~v~~~-----Gl~~~~~~~~--~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (139)
T PF03033_consen 24 RRGHEVRLATPPDFRERVEAA-----GLEFVPIPGD--SRLPRSL--------EPLANLRRLARLIRGLEEAMRILARFR 88 (139)
T ss_dssp HTT-EEEEEETGGGHHHHHHT-----T-EEEESSSC--GGGGHHH--------HHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeEEEeecccceeccccc-----CceEEEecCC--cCcCccc--------chhhhhhhHHHHhhhhhHHHHHhhccC
Confidence 489999999999999999998 9999998611 0010000 001111111111 11122222221
Q ss_pred ----------cCCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchH
Q 038300 77 ----------LSPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAA 111 (401)
Q Consensus 77 ----------~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~ 111 (401)
..+|+++.+.....+..+||++|||++.....+..
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~~ 133 (139)
T PF03033_consen 89 PDLVVAAGGYVADDVIIAAPLAFAAALVAEQLGIPGVANRLFPWF 133 (139)
T ss_dssp HCCCCHCTTTTECCEECHHHHHTHHHHHHHHHTS-EEEEESSGGG
T ss_pred cchhhhccCcccchHHHhhhhcCccceeEhhhCchHHHHhhCCcC
Confidence 13688888888888999999999999999887543
No 68
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=97.86 E-value=0.00074 Score=64.17 Aligned_cols=115 Identities=15% Similarity=0.204 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhc-CCceEEcccCc---hhhhcccCCcceEEecCCch
Q 038300 229 KEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTK-ERAMVIEGWAP---QMKILGHPSIGGFVSHCGWS 304 (401)
Q Consensus 229 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p---~~~~l~~~~~~~~i~hgG~~ 304 (401)
.+.+.+++++|...+.+++++..... ... ..+-+.+.+-.. ..++.+.+-++ ...+++++++ +||.++.+
T Consensus 219 ~~~l~~li~~L~~~~~~~~vi~P~~~-p~~---~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~~--vitdSSgg 292 (365)
T TIGR03568 219 EEQIKELLKALDELNKNYIFTYPNAD-AGS---RIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADA--VIGNSSSG 292 (365)
T ss_pred hHHHHHHHHHHHHhccCCEEEEeCCC-CCc---hHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCCE--EEEcChhH
Confidence 45688888888776655555542211 100 001111111111 35677765444 4488899999 99988544
Q ss_pred hHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeee-eeccCCCCCCHHHHHHHHHHHhc
Q 038300 305 SVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLE-VRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 305 s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~-l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
+.||.+.|+|.|.+- +.+ ...+.|..+. + ..++++|.+++.+++.
T Consensus 293 -i~EA~~lg~Pvv~l~---~R~----e~~~~g~nvl~v------g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 293 -IIEAPSFGVPTINIG---TRQ----KGRLRADSVIDV------DPDKEEIVKAIEKLLD 338 (365)
T ss_pred -HHhhhhcCCCEEeec---CCc----hhhhhcCeEEEe------CCCHHHHHHHHHHHhC
Confidence 499999999999774 211 1113344433 3 3478999999999654
No 69
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=97.80 E-value=0.038 Score=53.26 Aligned_cols=77 Identities=14% Similarity=0.224 Sum_probs=53.8
Q ss_pred CceEEcccCchh---hhcccCCcceEEecC---Cc-hhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCC
Q 038300 275 RAMVIEGWAPQM---KILGHPSIGGFVSHC---GW-SSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCG 347 (401)
Q Consensus 275 ~~~~~~~~~p~~---~~l~~~~~~~~i~hg---G~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~ 347 (401)
.++.+.+|+|+. .+++.+++ +|.-. |. .++.||+++|+|+|+-+..+-. ..+ ..|.+... .
T Consensus 250 ~~v~~~G~~~~~~~~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~----e~i-~~~~~~~~----~- 317 (398)
T cd03796 250 DRVELLGAVPHERVRDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIP----EVL-PPDMILLA----E- 317 (398)
T ss_pred CeEEEeCCCCHHHHHHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCCch----hhe-eCCceeec----C-
Confidence 457778898754 78888998 66432 33 3999999999999998775422 222 23434333 1
Q ss_pred CCCHHHHHHHHHHHhcC
Q 038300 348 RIQREEMARVIKEVVME 364 (401)
Q Consensus 348 ~~~~~~l~~~i~~~l~~ 364 (401)
.+.+++.++|.+++++
T Consensus 318 -~~~~~l~~~l~~~l~~ 333 (398)
T cd03796 318 -PDVESIVRKLEEAISI 333 (398)
T ss_pred -CCHHHHHHHHHHHHhC
Confidence 2689999999999973
No 70
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=97.80 E-value=0.032 Score=52.42 Aligned_cols=78 Identities=19% Similarity=0.325 Sum_probs=55.7
Q ss_pred CCceEEcc-cCchh---hhcccCCcceEEe--c----CCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeec
Q 038300 274 ERAMVIEG-WAPQM---KILGHPSIGGFVS--H----CGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRR 343 (401)
Q Consensus 274 ~~~~~~~~-~~p~~---~~l~~~~~~~~i~--h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~ 343 (401)
..++.+.+ |+|+. .+++.+++ +|. + +.-+++.||+++|+|+|+-+..+ ...+...+.|..+
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~~~g~~~-- 316 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDGGTGLLV-- 316 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeCCCcEEE--
Confidence 34666654 47754 78888888 652 2 22458999999999999987654 2334455778777
Q ss_pred cCCCCCCHHHHHHHHHHHhc
Q 038300 344 NKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 344 ~~~~~~~~~~l~~~i~~~l~ 363 (401)
. .-+.+++.++|.++++
T Consensus 317 -~--~~d~~~~~~~l~~l~~ 333 (366)
T cd03822 317 -P--PGDPAALAEAIRRLLA 333 (366)
T ss_pred -c--CCCHHHHHHHHHHHHc
Confidence 2 2368999999999998
No 71
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.70 E-value=0.02 Score=53.92 Aligned_cols=75 Identities=20% Similarity=0.386 Sum_probs=50.2
Q ss_pred CCceEEcccCchh---hhcccCCcceEEecCCc-----hhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccC
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVSHCGW-----SSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNK 345 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~hgG~-----~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~ 345 (401)
..++.+.+++++. +++..+++ ++.+.-. +++.||+++|+|+|+....+... .+.. .|... .
T Consensus 247 ~~~V~~~g~~~~~~~~~~~~~ad~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e----~~~~--~g~~~---~ 315 (363)
T cd04955 247 DPRIIFVGPIYDQELLELLRYAAL--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNRE----VLGD--KAIYF---K 315 (363)
T ss_pred CCcEEEccccChHHHHHHHHhCCE--EEeCCccCCCCChHHHHHHHcCCCEEEecCCccce----eecC--CeeEe---c
Confidence 4678888999886 56777777 6655433 47999999999999976543221 1122 34444 1
Q ss_pred CCCCCHHHHHHHHHHHhc
Q 038300 346 CGRIQREEMARVIKEVVM 363 (401)
Q Consensus 346 ~~~~~~~~l~~~i~~~l~ 363 (401)
.. +.+.++|.++++
T Consensus 316 ~~----~~l~~~i~~l~~ 329 (363)
T cd04955 316 VG----DDLASLLEELEA 329 (363)
T ss_pred Cc----hHHHHHHHHHHh
Confidence 11 229999999998
No 72
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=97.69 E-value=0.016 Score=56.26 Aligned_cols=77 Identities=23% Similarity=0.174 Sum_probs=54.2
Q ss_pred CceEEcccCchh---hhcccCCcceEEe-----cCCchhHHHHHHhCCcEEecCCccchhhHHHHHH---hhCeeeeeec
Q 038300 275 RAMVIEGWAPQM---KILGHPSIGGFVS-----HCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVE---DVGIGLEVRR 343 (401)
Q Consensus 275 ~~~~~~~~~p~~---~~l~~~~~~~~i~-----hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~---~~g~g~~l~~ 343 (401)
.++.+.+++|+. .+|+.+++ +|+ |-| .++.||+++|+|+|+.-..+.-. ..+. +...|+..
T Consensus 305 ~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fg-i~~lEAMa~G~pvIa~~~ggp~~---~iv~~~~~g~~G~l~-- 376 (419)
T cd03806 305 DKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFG-IGVVEYMAAGLIPLAHASGGPLL---DIVVPWDGGPTGFLA-- 376 (419)
T ss_pred CeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcc-cHHHHHHHcCCcEEEEcCCCCch---heeeccCCCCceEEe--
Confidence 468888888865 78888888 664 333 37899999999999866543211 1121 33577665
Q ss_pred cCCCCCCHHHHHHHHHHHhcC
Q 038300 344 NKCGRIQREEMARVIKEVVME 364 (401)
Q Consensus 344 ~~~~~~~~~~l~~~i~~~l~~ 364 (401)
. +++++.++|.+++++
T Consensus 377 ---~--d~~~la~ai~~ll~~ 392 (419)
T cd03806 377 ---S--TAEEYAEAIEKILSL 392 (419)
T ss_pred ---C--CHHHHHHHHHHHHhC
Confidence 2 789999999999974
No 73
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=97.67 E-value=0.0022 Score=60.50 Aligned_cols=115 Identities=12% Similarity=0.096 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchh---hhcccCCcceEEecCCc-hh
Q 038300 230 EEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQM---KILGHPSIGGFVSHCGW-SS 305 (401)
Q Consensus 230 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~l~~~~~~~~i~hgG~-~s 305 (401)
.....++++++..+.+++++ |.. . ..+.+.+ ....++.+.+++|+. ++++.+++-++-+.-|+ .+
T Consensus 208 K~~~~li~a~~~~~~~l~iv-G~g--~-------~~~~l~~-~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~e~~g~~ 276 (351)
T cd03804 208 KRIDLAIEAFNKLGKRLVVI-GDG--P-------ELDRLRA-KAGPNVTFLGRVSDEELRDLYARARAFLFPAEEDFGIV 276 (351)
T ss_pred cChHHHHHHHHHCCCcEEEE-ECC--h-------hHHHHHh-hcCCCEEEecCCCHHHHHHHHHhCCEEEECCcCCCCch
Confidence 34666777777777776554 421 1 1112222 235689999999984 67889998332233333 36
Q ss_pred HHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcC
Q 038300 306 VMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVME 364 (401)
Q Consensus 306 ~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~ 364 (401)
+.||+++|+|+|+....+ ....+.+.+.|+.+ + .-+.+++.++|.+++++
T Consensus 277 ~~Eama~G~Pvi~~~~~~----~~e~i~~~~~G~~~---~--~~~~~~la~~i~~l~~~ 326 (351)
T cd03804 277 PVEAMASGTPVIAYGKGG----ALETVIDGVTGILF---E--EQTVESLAAAVERFEKN 326 (351)
T ss_pred HHHHHHcCCCEEEeCCCC----CcceeeCCCCEEEe---C--CCCHHHHHHHHHHHHhC
Confidence 789999999999987644 22334455678887 2 23788999999999974
No 74
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.66 E-value=0.026 Score=56.06 Aligned_cols=92 Identities=17% Similarity=0.233 Sum_probs=55.6
Q ss_pred hhhcccCCcceEEecCCchhHHHHHHhCCcEEecCC-ccchhhHHHHHHhh---Ceee---eeecc-----C--CCCCCH
Q 038300 286 MKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPM-HVDQPLNARLVEDV---GIGL---EVRRN-----K--CGRIQR 351 (401)
Q Consensus 286 ~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~-~~dQ~~na~~~~~~---g~g~---~l~~~-----~--~~~~~~ 351 (401)
.++++.+++ .+.-+|. .+.|++..|+|||++=- ..=-+.-|+++... =+|+ ..++. - +++.++
T Consensus 483 ~~~m~aaD~--aLaaSGT-aTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tp 559 (608)
T PRK01021 483 YELMRECDC--ALAKCGT-IVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQP 559 (608)
T ss_pred HHHHHhcCe--eeecCCH-HHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCH
Confidence 488988998 8888885 57899999999998532 22223456666651 1111 11111 1 357899
Q ss_pred HHHHHHHHHHhcCc-ccHHHHHHHHHHHHHH
Q 038300 352 EEMARVIKEVVMER-EGEKIKRKTREMGEKI 381 (401)
Q Consensus 352 ~~l~~~i~~~l~~~-~~~~~~~~a~~~~~~~ 381 (401)
+.|.+++ ++|.++ .....++..+++.+.+
T Consensus 560 e~La~~l-~lL~d~~~r~~~~~~l~~lr~~L 589 (608)
T PRK01021 560 EEVAAAL-DILKTSQSKEKQKDACRDLYQAM 589 (608)
T ss_pred HHHHHHH-HHhcCHHHHHHHHHHHHHHHHHh
Confidence 9999997 777631 1123444444444444
No 75
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=97.65 E-value=0.00058 Score=65.01 Aligned_cols=105 Identities=15% Similarity=0.274 Sum_probs=71.0
Q ss_pred CceEEcccCchh---hhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCH
Q 038300 275 RAMVIEGWAPQM---KILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQR 351 (401)
Q Consensus 275 ~~~~~~~~~p~~---~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~ 351 (401)
.++.+.+.++.. .+++++++ +|+-+|. .+.||+++|+|+|..+..++++. +.+.|.++.+ . .++
T Consensus 255 ~~v~~~~~~~~~~~~~~l~~ad~--vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e----~~~~g~~~lv---~---~d~ 321 (365)
T TIGR00236 255 KRVHLIEPLEYLDFLNLAANSHL--ILTDSGG-VQEEAPSLGKPVLVLRDTTERPE----TVEAGTNKLV---G---TDK 321 (365)
T ss_pred CCEEEECCCChHHHHHHHHhCCE--EEECChh-HHHHHHHcCCCEEECCCCCCChH----HHhcCceEEe---C---CCH
Confidence 467776655543 67788888 9998774 47999999999999976565542 3346777666 1 378
Q ss_pred HHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc-HHHHHHHHHHHHh
Q 038300 352 EEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG-EEEIEWVADELIH 398 (401)
Q Consensus 352 ~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~~~ 398 (401)
++|.+++.++++ ++..+++.. +.....| ..+..++++.|.+
T Consensus 322 ~~i~~ai~~ll~---~~~~~~~~~---~~~~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 322 ENITKAAKRLLT---DPDEYKKMS---NASNPYGDGEASERIVEELLN 363 (365)
T ss_pred HHHHHHHHHHHh---ChHHHHHhh---hcCCCCcCchHHHHHHHHHHh
Confidence 999999999997 555554433 3223233 4455666665554
No 76
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=97.62 E-value=0.11 Score=55.25 Aligned_cols=110 Identities=15% Similarity=0.179 Sum_probs=66.8
Q ss_pred CceEEcccCchh---hhcccCC--cceEEecC---C-chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccC
Q 038300 275 RAMVIEGWAPQM---KILGHPS--IGGFVSHC---G-WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNK 345 (401)
Q Consensus 275 ~~~~~~~~~p~~---~~l~~~~--~~~~i~hg---G-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~ 345 (401)
.++.+.+++++. +++..++ .++||.-+ | -.++.||+++|+|+|+-...+ ....+.....|+.+
T Consensus 548 g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~g~nGlLV---- 619 (1050)
T TIGR02468 548 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRVLDNGLLV---- 619 (1050)
T ss_pred CeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhccCCcEEEE----
Confidence 456667777765 5666552 12277642 2 258999999999999987644 12233334568877
Q ss_pred CCCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHH-HHHhhc-HHHHHHHHHHH
Q 038300 346 CGRIQREEMARVIKEVVMEREGEKIKRKTREMGE-KIKEKG-EEEIEWVADEL 396 (401)
Q Consensus 346 ~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~-~~~~~~-~~~~~~~v~~~ 396 (401)
..-+.++|.++|.++++ ++..+++..+-+. .++... ...+.++++.+
T Consensus 620 -dP~D~eaLA~AL~~LL~---Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~i 668 (1050)
T TIGR02468 620 -DPHDQQAIADALLKLVA---DKQLWAECRQNGLKNIHLFSWPEHCKTYLSRI 668 (1050)
T ss_pred -CCCCHHHHHHHHHHHhh---CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 23478999999999998 5554443333222 223333 44455555444
No 77
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.58 E-value=0.00077 Score=59.42 Aligned_cols=131 Identities=18% Similarity=0.198 Sum_probs=94.9
Q ss_pred HHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhc-CCceEEcccCchh-hhcccCCcceEEecCCchhHHH
Q 038300 231 EMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTK-ERAMVIEGWAPQM-KILGHPSIGGFVSHCGWSSVME 308 (401)
Q Consensus 231 ~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~-~~l~~~~~~~~i~hgG~~s~~e 308 (401)
...+++..|++..+.+-.+++.. .+-+.+..++.. .+++.......++ .++..++. .|+-+| .|++|
T Consensus 173 lt~kvl~~L~~~~~nl~iV~gs~--------~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~--aI~AaG-stlyE 241 (318)
T COG3980 173 LTLKVLAELEQKNVNLHIVVGSS--------NPTLKNLRKRAEKYPNINLYIDTNDMAELMKEADL--AISAAG-STLYE 241 (318)
T ss_pred hHHHHHHHhhccCeeEEEEecCC--------CcchhHHHHHHhhCCCeeeEecchhHHHHHHhcch--heeccc-hHHHH
Confidence 45667778877776665666521 112334444443 4556554445544 89999999 999888 58999
Q ss_pred HHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHH
Q 038300 309 SMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMEREGEKIKRKTREMGE 379 (401)
Q Consensus 309 al~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~ 379 (401)
++..|+|.+++|+...|.--|+..+.+|+-..+ ... ++.+.....+.+++. +...|++.-.-++
T Consensus 242 a~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l---~~~-l~~~~~~~~~~~i~~---d~~~rk~l~~~~~ 305 (318)
T COG3980 242 ALLLGVPSLVLPLAENQIATAKEFEALGIIKQL---GYH-LKDLAKDYEILQIQK---DYARRKNLSFGSK 305 (318)
T ss_pred HHHhcCCceEEeeeccHHHHHHHHHhcCchhhc---cCC-CchHHHHHHHHHhhh---CHHHhhhhhhccc
Confidence 999999999999999999999999999998877 434 677888888888887 5666665544443
No 78
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.56 E-value=0.0012 Score=63.31 Aligned_cols=113 Identities=12% Similarity=0.162 Sum_probs=74.6
Q ss_pred CceEEcccCchh---hhcccCCcceEEecCCc-----hhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCC
Q 038300 275 RAMVIEGWAPQM---KILGHPSIGGFVSHCGW-----SSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKC 346 (401)
Q Consensus 275 ~~~~~~~~~p~~---~~l~~~~~~~~i~hgG~-----~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~ 346 (401)
.++.+.+++|+. .+++.+++ ||.-+.+ .++.||+++|+|+|+....+ +...+.+...|..+ .
T Consensus 257 ~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv~~~~~G~~l----~ 326 (380)
T PRK15484 257 DRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFVLEGITGYHL----A 326 (380)
T ss_pred CcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhcccCCceEEE----e
Confidence 467777888754 67889999 7753332 57889999999999987643 33445555667644 1
Q ss_pred CCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHh-hc-HHHHHHHHHHHHhhh
Q 038300 347 GRIQREEMARVIKEVVMEREGEKIKRKTREMGEKIKE-KG-EEEIEWVADELIHLF 400 (401)
Q Consensus 347 ~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~-~~-~~~~~~~v~~~~~~~ 400 (401)
...+.+++.++|.++++ ++..++..++.++.+.+ .. ...+.++.+.+.+++
T Consensus 327 ~~~d~~~la~~I~~ll~---d~~~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 327 EPMTSDSIISDINRTLA---DPELTQIAEQAKDFVFSKYSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred CCCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 23478999999999998 55544433333333322 33 555666666666654
No 79
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=97.55 E-value=8.4e-05 Score=69.51 Aligned_cols=102 Identities=18% Similarity=0.233 Sum_probs=74.3
Q ss_pred hhhcccCCcceEEecCCchhHHHHHHhCCcEEecCC--ccchhhHHHHHH---hhCeeeeee-----cc-----CCCCCC
Q 038300 286 MKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPM--HVDQPLNARLVE---DVGIGLEVR-----RN-----KCGRIQ 350 (401)
Q Consensus 286 ~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~--~~dQ~~na~~~~---~~g~g~~l~-----~~-----~~~~~~ 350 (401)
.+++..+|+ .|+.+|..|+ |++..|+|+|+ ++ ..-|+.||++++ ..|.+-.+. +. -+++.|
T Consensus 230 ~~~m~~aDl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t 305 (347)
T PRK14089 230 HKALLEAEF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVT 305 (347)
T ss_pred HHHHHhhhH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCC
Confidence 488999999 9999999988 99999999999 65 356888999999 446553331 11 136789
Q ss_pred HHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhcHHHHHHHHHH
Q 038300 351 REEMARVIKEVVMEREGEKIKRKTREMGEKIKEKGEEEIEWVADE 395 (401)
Q Consensus 351 ~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~v~~ 395 (401)
++.|.+++.+ .. ...+++...++.+.+..++.+.+++++.+
T Consensus 306 ~~~la~~i~~-~~---~~~~~~~~~~l~~~l~~~a~~~~A~~i~~ 346 (347)
T PRK14089 306 VENLLKAYKE-MD---REKFFKKSKELREYLKHGSAKNVAKILKE 346 (347)
T ss_pred HHHHHHHHHH-HH---HHHHHHHHHHHHHHhcCCHHHHHHHHHhc
Confidence 9999999987 22 45677777777777754225555555543
No 80
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=97.43 E-value=0.15 Score=52.45 Aligned_cols=95 Identities=16% Similarity=0.225 Sum_probs=64.6
Q ss_pred CCceEEcccCchh-hhcccCCcceEEe---cCC-chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCC
Q 038300 274 ERAMVIEGWAPQM-KILGHPSIGGFVS---HCG-WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGR 348 (401)
Q Consensus 274 ~~~~~~~~~~p~~-~~l~~~~~~~~i~---hgG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~ 348 (401)
..++.+.+|.++. .+|+.+++ ||. +-| -+++.||+++|+|+|+....+ +...+.+...|+.+ ..++
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG----~~EiV~dg~~GlLv---~~~d 643 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAGG----AGEAVQEGVTGLTL---PADT 643 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCCC----hHHHccCCCCEEEe---CCCC
Confidence 3567777888765 88999998 664 333 468999999999999987643 33445555578888 5555
Q ss_pred CCHHHHHHHHHHHhcCc-ccHHHHHHHHHH
Q 038300 349 IQREEMARVIKEVVMER-EGEKIKRKTREM 377 (401)
Q Consensus 349 ~~~~~l~~~i~~~l~~~-~~~~~~~~a~~~ 377 (401)
.+.+++.+++.+++.+. .++.+++++++.
T Consensus 644 ~~~~~La~aL~~ll~~l~~~~~l~~~ar~~ 673 (694)
T PRK15179 644 VTAPDVAEALARIHDMCAADPGIARKAADW 673 (694)
T ss_pred CChHHHHHHHHHHHhChhccHHHHHHHHHH
Confidence 66677777777766421 145666655443
No 81
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=97.38 E-value=0.0012 Score=62.72 Aligned_cols=101 Identities=17% Similarity=0.227 Sum_probs=67.2
Q ss_pred CceEEcccCchh---hhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCH
Q 038300 275 RAMVIEGWAPQM---KILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQR 351 (401)
Q Consensus 275 ~~~~~~~~~p~~---~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~ 351 (401)
.++.+.+..+.. .++..+++ ||+.+| |.+.|+++.|+|+|.++.. |. +..+.+.|+++.+ . -+.
T Consensus 258 ~~v~~~~~~~~~~~~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~~g~~~~~---~---~~~ 324 (363)
T cd03786 258 PNVLLISPLGYLYFLLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVESGTNVLV---G---TDP 324 (363)
T ss_pred CCEEEECCcCHHHHHHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhheeeEEec---C---CCH
Confidence 467666544432 67888999 999999 7788999999999998743 22 4455667887766 2 148
Q ss_pred HHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc-HHHHHHHHHHH
Q 038300 352 EEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG-EEEIEWVADEL 396 (401)
Q Consensus 352 ~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~ 396 (401)
++|.++|.++++ ++..+++ ++ ....| ..+..++++.|
T Consensus 325 ~~i~~~i~~ll~---~~~~~~~---~~--~~~~~~~~a~~~I~~~l 362 (363)
T cd03786 325 EAILAAIEKLLS---DEFAYSL---MS--INPYGDGNASERIVEIL 362 (363)
T ss_pred HHHHHHHHHHhc---Cchhhhc---CC--CCCCCCCHHHHHHHHHh
Confidence 999999999998 4333332 22 22233 45555555543
No 82
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.38 E-value=0.036 Score=52.42 Aligned_cols=93 Identities=18% Similarity=0.239 Sum_probs=61.0
Q ss_pred hhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCC-ccchhhHHHHHHhhC-eee---eeecc-----CCCCCCHHHH
Q 038300 285 QMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPM-HVDQPLNARLVEDVG-IGL---EVRRN-----KCGRIQREEM 354 (401)
Q Consensus 285 ~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~-~~dQ~~na~~~~~~g-~g~---~l~~~-----~~~~~~~~~l 354 (401)
-.+++..+++ .+.-+|. .+.|+..+|+|||++=- ..=-+..|+++.... +|+ ..++. -++..+++.|
T Consensus 254 ~~~~m~~ad~--al~~SGT-aTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i 330 (373)
T PF02684_consen 254 SYDAMAAADA--ALAASGT-ATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENI 330 (373)
T ss_pred hHHHHHhCcc--hhhcCCH-HHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHH
Confidence 3488888888 7777774 68899999999998643 233455777776542 221 11111 1457899999
Q ss_pred HHHHHHHhcCcccHHHHHHHHHHHHHHHh
Q 038300 355 ARVIKEVVMEREGEKIKRKTREMGEKIKE 383 (401)
Q Consensus 355 ~~~i~~~l~~~~~~~~~~~a~~~~~~~~~ 383 (401)
.+++.++++ |+..++......+.+++
T Consensus 331 ~~~~~~ll~---~~~~~~~~~~~~~~~~~ 356 (373)
T PF02684_consen 331 AAELLELLE---NPEKRKKQKELFREIRQ 356 (373)
T ss_pred HHHHHHHhc---CHHHHHHHHHHHHHHHH
Confidence 999999998 45445444444444444
No 83
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.31 E-value=0.011 Score=57.23 Aligned_cols=79 Identities=22% Similarity=0.365 Sum_probs=58.5
Q ss_pred CCceEEcccCchh---hhcccCCcceEEec---------CCc-hhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeee
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVSH---------CGW-SSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLE 340 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~h---------gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~ 340 (401)
..++.+.+|+|+. +++..+++ ||.- -|. ++++||+++|+|+|+-...+ ....+.+...|+.
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~~~~~G~l 351 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVEADKSGWL 351 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhcCCCceEE
Confidence 3468888999875 67888998 6642 233 57899999999999976543 3334444567887
Q ss_pred eeccCCCCCCHHHHHHHHHHHhc
Q 038300 341 VRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 341 l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
+ + .-+.+++.++|.++++
T Consensus 352 v---~--~~d~~~la~ai~~l~~ 369 (406)
T PRK15427 352 V---P--ENDAQALAQRLAAFSQ 369 (406)
T ss_pred e---C--CCCHHHHHHHHHHHHh
Confidence 7 2 3478999999999997
No 84
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.30 E-value=0.079 Score=48.99 Aligned_cols=79 Identities=20% Similarity=0.255 Sum_probs=54.2
Q ss_pred CCceEEcccCchh-hhcccCCcceEEec----CCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCC
Q 038300 274 ERAMVIEGWAPQM-KILGHPSIGGFVSH----CGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGR 348 (401)
Q Consensus 274 ~~~~~~~~~~p~~-~~l~~~~~~~~i~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~ 348 (401)
..++.+.++.++. ++++.+++ +|.- |.-+++.||+++|+|+|+-... .....+.+.+.|+.. +.
T Consensus 245 ~~~v~~~g~~~~~~~~~~~~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~~~~g~~~-----~~ 313 (353)
T cd03811 245 ADRVHFLGFQSNPYPYLKAADL--FVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILEDGENGLLV-----PV 313 (353)
T ss_pred CccEEEecccCCHHHHHHhCCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcCCCceEEE-----CC
Confidence 3467777787765 88999998 6632 2246899999999999986544 445566677888887 23
Q ss_pred CCHHHH---HHHHHHHhc
Q 038300 349 IQREEM---ARVIKEVVM 363 (401)
Q Consensus 349 ~~~~~l---~~~i~~~l~ 363 (401)
-+.+.+ .+++.+++.
T Consensus 314 ~~~~~~~~~~~~i~~~~~ 331 (353)
T cd03811 314 GDEAALAAAALALLDLLL 331 (353)
T ss_pred CCHHHHHHHHHHHHhccC
Confidence 366777 444544444
No 85
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.21 E-value=0.0056 Score=57.56 Aligned_cols=82 Identities=17% Similarity=0.169 Sum_probs=59.9
Q ss_pred CCceEEcccCchh---hhcccCCcceEEec---CCc-hhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCC
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVSH---CGW-SSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKC 346 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~h---gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~ 346 (401)
..++.+.+|+|+. .+++.+++..+.++ -|. .++.||+++|+|+|+....+....... +.+.|...
T Consensus 243 ~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~~~g~~~----- 314 (357)
T cd03795 243 LDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---HGVTGLVV----- 314 (357)
T ss_pred cceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---CCCceEEe-----
Confidence 4689999999974 68888998444342 233 479999999999999776555543322 25678777
Q ss_pred CCCCHHHHHHHHHHHhc
Q 038300 347 GRIQREEMARVIKEVVM 363 (401)
Q Consensus 347 ~~~~~~~l~~~i~~~l~ 363 (401)
..-+.+++.++|.++++
T Consensus 315 ~~~d~~~~~~~i~~l~~ 331 (357)
T cd03795 315 PPGDPAALAEAIRRLLE 331 (357)
T ss_pred CCCCHHHHHHHHHHHHH
Confidence 23478999999999998
No 86
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=97.14 E-value=0.0036 Score=58.80 Aligned_cols=107 Identities=14% Similarity=0.276 Sum_probs=76.1
Q ss_pred CceEEcccCchhhh---cccCCcceEEecC-------C------chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCee
Q 038300 275 RAMVIEGWAPQMKI---LGHPSIGGFVSHC-------G------WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIG 338 (401)
Q Consensus 275 ~~~~~~~~~p~~~~---l~~~~~~~~i~hg-------G------~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g 338 (401)
.|+...+|+|+.++ |+. +.+.+...- . -+-+.+.+++|+|+|+.+ +...+..+++.++|
T Consensus 207 ~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V~~~~~G 281 (333)
T PRK09814 207 ANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFIVENGLG 281 (333)
T ss_pred CCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHHHhCCce
Confidence 47888899998744 444 444443221 1 122778899999999964 45677888889999
Q ss_pred eeeeccCCCCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc--HHHHHHHHH
Q 038300 339 LEVRRNKCGRIQREEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG--EEEIEWVAD 394 (401)
Q Consensus 339 ~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~v~ 394 (401)
+.+ + +.+++.+++..+.. ++-..+++|++++++.++.+- .+++.+++.
T Consensus 282 ~~v---~----~~~el~~~l~~~~~-~~~~~m~~n~~~~~~~~~~g~~~~~~~~~~~~ 331 (333)
T PRK09814 282 FVV---D----SLEELPEIIDNITE-EEYQEMVENVKKISKLLRNGYFTKKALVDAIK 331 (333)
T ss_pred EEe---C----CHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHhcchhHHHHHHHHHh
Confidence 999 3 56789999987543 223568899999999988876 666666654
No 87
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.09 E-value=0.094 Score=49.03 Aligned_cols=106 Identities=16% Similarity=0.317 Sum_probs=77.1
Q ss_pred ceEEc---ccCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHH
Q 038300 276 AMVIE---GWAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQRE 352 (401)
Q Consensus 276 ~~~~~---~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~ 352 (401)
++.+. +|.+...++.++-+ ++|-+| |-.-||-..|+|.+++=...+++. ..++|.-+.+ ..+.+
T Consensus 263 ~v~li~pl~~~~f~~L~~~a~~--iltDSG-giqEEAp~lg~Pvl~lR~~TERPE----~v~agt~~lv------g~~~~ 329 (383)
T COG0381 263 RVKLIDPLGYLDFHNLMKNAFL--ILTDSG-GIQEEAPSLGKPVLVLRDTTERPE----GVEAGTNILV------GTDEE 329 (383)
T ss_pred cEEEeCCcchHHHHHHHHhceE--EEecCC-chhhhHHhcCCcEEeeccCCCCcc----ceecCceEEe------CccHH
Confidence 55553 46677799999988 999998 568899999999999999999997 3455655555 34679
Q ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc-HHHHHHHHHHHHhhh
Q 038300 353 EMARVIKEVVMEREGEKIKRKTREMGEKIKEKG-EEEIEWVADELIHLF 400 (401)
Q Consensus 353 ~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~~~~~ 400 (401)
.|.+++.++++ ++...++ |+......| -++..++++.+.++.
T Consensus 330 ~i~~~~~~ll~---~~~~~~~---m~~~~npYgdg~as~rIv~~l~~~~ 372 (383)
T COG0381 330 NILDAATELLE---DEEFYER---MSNAKNPYGDGNASERIVEILLNYF 372 (383)
T ss_pred HHHHHHHHHhh---ChHHHHH---HhcccCCCcCcchHHHHHHHHHHHh
Confidence 99999999998 4444443 333334455 457777777776553
No 88
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.03 E-value=0.004 Score=52.14 Aligned_cols=78 Identities=26% Similarity=0.374 Sum_probs=58.7
Q ss_pred CceEEcccCc--hh-hhcccCCcceEEec----CCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCC
Q 038300 275 RAMVIEGWAP--QM-KILGHPSIGGFVSH----CGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCG 347 (401)
Q Consensus 275 ~~~~~~~~~p--~~-~~l~~~~~~~~i~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~ 347 (401)
.++.+..+.+ +. .++..+++ +|+. +.-.++.||+++|+|+|+.- ...+...+.+.+.|+.+ .
T Consensus 73 ~~i~~~~~~~~~~l~~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~~~~~~g~~~---~-- 141 (172)
T PF00534_consen 73 ENIIFLGYVPDDELDELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEIINDGVNGFLF---D-- 141 (172)
T ss_dssp TTEEEEESHSHHHHHHHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHSGTTTSEEEE---S--
T ss_pred cccccccccccccccccccccee--ccccccccccccccccccccccceeecc----ccCCceeeccccceEEe---C--
Confidence 4677778887 32 88889998 7766 45679999999999999754 44555666666779888 3
Q ss_pred CCCHHHHHHHHHHHhc
Q 038300 348 RIQREEMARVIKEVVM 363 (401)
Q Consensus 348 ~~~~~~l~~~i~~~l~ 363 (401)
..+.+++.++|.+++.
T Consensus 142 ~~~~~~l~~~i~~~l~ 157 (172)
T PF00534_consen 142 PNDIEELADAIEKLLN 157 (172)
T ss_dssp TTSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHC
Confidence 2389999999999998
No 89
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.03 E-value=0.019 Score=55.58 Aligned_cols=82 Identities=21% Similarity=0.322 Sum_probs=58.9
Q ss_pred CCceEEcccCchh---hhcccCCcceEEecCC----chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCC
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVSHCG----WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKC 346 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~hgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~ 346 (401)
..++...+|+++. +++..+++.+||..+- -++++||+++|+|+|+-...+ ....+.+.+.|+.+ .
T Consensus 288 ~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg----~~e~i~~~~~G~l~---~- 359 (407)
T cd04946 288 NISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG----TPEIVDNGGNGLLL---S- 359 (407)
T ss_pred CceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCC----cHHHhcCCCcEEEe---C-
Confidence 4467788999876 5555544444876553 458999999999999866443 44455555588877 2
Q ss_pred CCCCHHHHHHHHHHHhc
Q 038300 347 GRIQREEMARVIKEVVM 363 (401)
Q Consensus 347 ~~~~~~~l~~~i~~~l~ 363 (401)
..-+.+++.++|.++++
T Consensus 360 ~~~~~~~la~~I~~ll~ 376 (407)
T cd04946 360 KDPTPNELVSSLSKFID 376 (407)
T ss_pred CCCCHHHHHHHHHHHHh
Confidence 23478999999999997
No 90
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.02 E-value=0.0035 Score=48.86 Aligned_cols=63 Identities=21% Similarity=0.350 Sum_probs=50.9
Q ss_pred eEEcccC--ch-hhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCc--------cchhhHHHHHHhhCeeeee
Q 038300 277 MVIEGWA--PQ-MKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMH--------VDQPLNARLVEDVGIGLEV 341 (401)
Q Consensus 277 ~~~~~~~--p~-~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~--------~dQ~~na~~~~~~g~g~~l 341 (401)
..+.+|. +- ..+...+++ +|+|||.||+..++..++|.|++|-. .+|..-|..+.+.+.=+..
T Consensus 48 l~v~~F~~~~kiQsli~darI--VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~~~vv~~ 121 (161)
T COG5017 48 LRVYGFDKEEKIQSLIHDARI--VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEINYVVAC 121 (161)
T ss_pred cEEEeechHHHHHHHhhcceE--EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhcCceEEE
Confidence 3444443 43 378888888 99999999999999999999999963 4688899999998777666
No 91
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.02 E-value=0.0073 Score=58.18 Aligned_cols=77 Identities=21% Similarity=0.305 Sum_probs=57.5
Q ss_pred CCceEEcccCchh-hhcccCCcceEE--ec--CCc-hhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCC
Q 038300 274 ERAMVIEGWAPQM-KILGHPSIGGFV--SH--CGW-SSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCG 347 (401)
Q Consensus 274 ~~~~~~~~~~p~~-~~l~~~~~~~~i--~h--gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~ 347 (401)
..++.+.+++++. .+++++++ || ++ .|. +.+.||+++|+|+|+-+...+.. ....|.|+.+ .
T Consensus 279 ~~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~~~g~lv---~-- 346 (397)
T TIGR03087 279 LPGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALPGAELLV---A-- 346 (397)
T ss_pred CCCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccCCcceEe---C--
Confidence 4578888899875 88999999 65 43 344 36999999999999988643321 1223678777 2
Q ss_pred CCCHHHHHHHHHHHhc
Q 038300 348 RIQREEMARVIKEVVM 363 (401)
Q Consensus 348 ~~~~~~l~~~i~~~l~ 363 (401)
-+.+++.++|.++++
T Consensus 347 -~~~~~la~ai~~ll~ 361 (397)
T TIGR03087 347 -ADPADFAAAILALLA 361 (397)
T ss_pred -CCHHHHHHHHHHHHc
Confidence 378999999999998
No 92
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=97.02 E-value=0.021 Score=53.58 Aligned_cols=77 Identities=19% Similarity=0.258 Sum_probs=56.6
Q ss_pred CCceEEcccCchh---hhcccCCcceEEecCC----chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCC
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVSHCG----WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKC 346 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~hgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~ 346 (401)
..++.+.+|+++. .++..+++ +|.-.- -+++.||+++|+|+|+-+..+ ....+.+ +.|... ..
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~----~~~~~~~-~~~~~~---~~ 330 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDKVP----WQELIEY-GCGWVV---DD 330 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCCCC----HHHHhhc-CceEEe---CC
Confidence 3578888999854 66888888 554332 468999999999999976543 3344444 778776 22
Q ss_pred CCCCHHHHHHHHHHHhc
Q 038300 347 GRIQREEMARVIKEVVM 363 (401)
Q Consensus 347 ~~~~~~~l~~~i~~~l~ 363 (401)
+.+++.++|.++++
T Consensus 331 ---~~~~~~~~i~~l~~ 344 (375)
T cd03821 331 ---DVDALAAALRRALE 344 (375)
T ss_pred ---ChHHHHHHHHHHHh
Confidence 34999999999998
No 93
>PLN02949 transferase, transferring glycosyl groups
Probab=97.00 E-value=0.11 Score=51.16 Aligned_cols=78 Identities=24% Similarity=0.185 Sum_probs=52.0
Q ss_pred CCceEEcccCchh---hhcccCCcceEEe---cCCch-hHHHHHHhCCcEEecCCcc---chhhHHHHHHhhC-eeeeee
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVS---HCGWS-SVMESMRLGVPIIAMPMHV---DQPLNARLVEDVG-IGLEVR 342 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~---hgG~~-s~~eal~~GvP~i~~P~~~---dQ~~na~~~~~~g-~g~~l~ 342 (401)
..++.+..++|+. ++|+.+++ +|. +=|+| ++.||+++|+|+|+....+ |.-.+. ..| .|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~----~~g~tG~l~- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDE----DGQQTGFLA- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecC----CCCcccccC-
Confidence 3468888888765 67888888 663 12333 7999999999999987654 111110 012 34433
Q ss_pred ccCCCCCCHHHHHHHHHHHhcC
Q 038300 343 RNKCGRIQREEMARVIKEVVME 364 (401)
Q Consensus 343 ~~~~~~~~~~~l~~~i~~~l~~ 364 (401)
. +.+++.++|.+++++
T Consensus 407 ----~--~~~~la~ai~~ll~~ 422 (463)
T PLN02949 407 ----T--TVEEYADAILEVLRM 422 (463)
T ss_pred ----C--CHHHHHHHHHHHHhC
Confidence 1 789999999999973
No 94
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=96.81 E-value=0.015 Score=54.29 Aligned_cols=77 Identities=25% Similarity=0.377 Sum_probs=53.9
Q ss_pred CceEEcccCchh-hhcccCCcceEEecCCc----hhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCC
Q 038300 275 RAMVIEGWAPQM-KILGHPSIGGFVSHCGW----SSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRI 349 (401)
Q Consensus 275 ~~~~~~~~~p~~-~~l~~~~~~~~i~hgG~----~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~ 349 (401)
.++.+.+...+. .+++.+++ +|..+.+ +++.||+++|+|+|+-...+ +...+.+ .|..+ .. -
T Consensus 251 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~----~~e~~~~--~g~~~---~~--~ 317 (365)
T cd03807 251 DKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDVGD----NAELVGD--TGFLV---PP--G 317 (365)
T ss_pred ceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCCCC----hHHHhhc--CCEEe---CC--C
Confidence 345555544443 88999998 7765543 79999999999999865433 4444444 56556 22 3
Q ss_pred CHHHHHHHHHHHhcC
Q 038300 350 QREEMARVIKEVVME 364 (401)
Q Consensus 350 ~~~~l~~~i~~~l~~ 364 (401)
+.+++.++|.+++++
T Consensus 318 ~~~~l~~~i~~l~~~ 332 (365)
T cd03807 318 DPEALAEAIEALLAD 332 (365)
T ss_pred CHHHHHHHHHHHHhC
Confidence 689999999999983
No 95
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=96.74 E-value=0.049 Score=51.66 Aligned_cols=80 Identities=18% Similarity=0.258 Sum_probs=55.6
Q ss_pred CCceEEcccCch--h---hhcccCCcceEEecCC----chhHHHHHHhCCcEEecC-CccchhhHHHHHHhhCeeeeeec
Q 038300 274 ERAMVIEGWAPQ--M---KILGHPSIGGFVSHCG----WSSVMESMRLGVPIIAMP-MHVDQPLNARLVEDVGIGLEVRR 343 (401)
Q Consensus 274 ~~~~~~~~~~p~--~---~~l~~~~~~~~i~hgG----~~s~~eal~~GvP~i~~P-~~~dQ~~na~~~~~~g~g~~l~~ 343 (401)
+.++.+.+|.++ . +.++.+++ +|...- -.++.||+++|+|+|+.- ..+ ....+++...|..+
T Consensus 235 ~~~v~f~G~~~~~~~~~~~~~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~~~~G~lv-- 306 (359)
T PRK09922 235 EQRIIWHGWQSQPWEVVQQKIKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKPGLNGELY-- 306 (359)
T ss_pred CCeEEEecccCCcHHHHHHHHhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccCCCceEEE--
Confidence 357888888754 2 44556677 664322 469999999999999876 333 11344445678777
Q ss_pred cCCCCCCHHHHHHHHHHHhcC
Q 038300 344 NKCGRIQREEMARVIKEVVME 364 (401)
Q Consensus 344 ~~~~~~~~~~l~~~i~~~l~~ 364 (401)
..-+.+++.++|.+++++
T Consensus 307 ---~~~d~~~la~~i~~l~~~ 324 (359)
T PRK09922 307 ---TPGNIDEFVGKLNKVISG 324 (359)
T ss_pred ---CCCCHHHHHHHHHHHHhC
Confidence 234899999999999984
No 96
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=96.74 E-value=0.036 Score=52.79 Aligned_cols=77 Identities=23% Similarity=0.285 Sum_probs=54.8
Q ss_pred ceEEcccCchh-hhcccCCcceEE--ec--CCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCC
Q 038300 276 AMVIEGWAPQM-KILGHPSIGGFV--SH--CGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQ 350 (401)
Q Consensus 276 ~~~~~~~~p~~-~~l~~~~~~~~i--~h--gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~ 350 (401)
++.+.++..+. ++++.+++ +| |+ |--+++.||+++|+|+|+-...+ +...+.+...|..+ + .-+
T Consensus 256 ~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i~~~~~g~~~---~--~~d 324 (374)
T TIGR03088 256 LVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELVQHGVTGALV---P--PGD 324 (374)
T ss_pred eEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHhcCCCceEEe---C--CCC
Confidence 34444444443 88999999 66 33 33568999999999999977643 34445455678777 2 347
Q ss_pred HHHHHHHHHHHhc
Q 038300 351 REEMARVIKEVVM 363 (401)
Q Consensus 351 ~~~l~~~i~~~l~ 363 (401)
.+++.++|.++++
T Consensus 325 ~~~la~~i~~l~~ 337 (374)
T TIGR03088 325 AVALARALQPYVS 337 (374)
T ss_pred HHHHHHHHHHHHh
Confidence 8999999999997
No 97
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=96.68 E-value=0.035 Score=52.03 Aligned_cols=80 Identities=28% Similarity=0.341 Sum_probs=58.0
Q ss_pred CCceEEcccCchh---hhcccCCcceEEec----------CCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeee
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVSH----------CGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLE 340 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~h----------gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~ 340 (401)
..++.+.+++|+. .+++++++ +|.- |.-+++.||+++|+|+|+.+..+ ....+.+...|..
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~~~~g~~ 308 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVEDGETGLL 308 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhCCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhCCCceEE
Confidence 3578888999754 78888998 5552 22468999999999999976533 2223444457887
Q ss_pred eeccCCCCCCHHHHHHHHHHHhcC
Q 038300 341 VRRNKCGRIQREEMARVIKEVVME 364 (401)
Q Consensus 341 l~~~~~~~~~~~~l~~~i~~~l~~ 364 (401)
+ . .-+.+++.++|.+++++
T Consensus 309 ~---~--~~~~~~l~~~i~~~~~~ 327 (355)
T cd03799 309 V---P--PGDPEALADAIERLLDD 327 (355)
T ss_pred e---C--CCCHHHHHHHHHHHHhC
Confidence 7 2 23789999999999973
No 98
>PLN02501 digalactosyldiacylglycerol synthase
Probab=96.67 E-value=0.35 Score=49.12 Aligned_cols=74 Identities=9% Similarity=0.071 Sum_probs=51.3
Q ss_pred eEEcccCchh-hhcccCCcceEEecC---C-chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCH
Q 038300 277 MVIEGWAPQM-KILGHPSIGGFVSHC---G-WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQR 351 (401)
Q Consensus 277 ~~~~~~~p~~-~~l~~~~~~~~i~hg---G-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~ 351 (401)
+.+.++.++. ++++.+++ ||.-+ | -+++.||+++|+|+|+.-..+... + ..|.+..+ . -+.
T Consensus 603 V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V-~~g~nGll----~--~D~ 668 (794)
T PLN02501 603 LNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----F-RSFPNCLT----Y--KTS 668 (794)
T ss_pred EEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----E-eecCCeEe----c--CCH
Confidence 5555666655 58999998 77532 2 458999999999999988765321 1 12333333 1 268
Q ss_pred HHHHHHHHHHhcC
Q 038300 352 EEMARVIKEVVME 364 (401)
Q Consensus 352 ~~l~~~i~~~l~~ 364 (401)
+++.++|.++|.+
T Consensus 669 EafAeAI~~LLsd 681 (794)
T PLN02501 669 EDFVAKVKEALAN 681 (794)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999984
No 99
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=96.65 E-value=0.051 Score=51.08 Aligned_cols=88 Identities=19% Similarity=0.205 Sum_probs=58.8
Q ss_pred CceEEcccCchh-hhcccCCcceEEecCC----chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCC
Q 038300 275 RAMVIEGWAPQM-KILGHPSIGGFVSHCG----WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRI 349 (401)
Q Consensus 275 ~~~~~~~~~p~~-~~l~~~~~~~~i~hgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~ 349 (401)
.++.+.++..+. ++++.+++ +|.-.. -+++.||+++|+|+|+-.. ..+...+++ .|..+ . .-
T Consensus 245 ~~v~~~g~~~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~--~g~~~---~--~~ 311 (360)
T cd04951 245 NRVKLLGLRDDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVATDA----GGVREVVGD--SGLIV---P--IS 311 (360)
T ss_pred CcEEEecccccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEecC----CChhhEecC--CceEe---C--CC
Confidence 467777776654 88999998 665432 4689999999999998543 344445555 34444 2 24
Q ss_pred CHHHHHHHHHHHhcCcccHHHHHHHHHH
Q 038300 350 QREEMARVIKEVVMEREGEKIKRKTREM 377 (401)
Q Consensus 350 ~~~~l~~~i~~~l~~~~~~~~~~~a~~~ 377 (401)
+.+++.++|.++++. ++.+++...+-
T Consensus 312 ~~~~~~~~i~~ll~~--~~~~~~~~~~~ 337 (360)
T cd04951 312 DPEALANKIDEILKM--SGEERDIIGAR 337 (360)
T ss_pred CHHHHHHHHHHHHhC--CHHHHHHHHHH
Confidence 789999999999843 44555444433
No 100
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=96.56 E-value=0.07 Score=50.24 Aligned_cols=78 Identities=17% Similarity=0.159 Sum_probs=56.4
Q ss_pred CceEEcccCc-hh---hhcccCCcceEEecCC----chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCC
Q 038300 275 RAMVIEGWAP-QM---KILGHPSIGGFVSHCG----WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKC 346 (401)
Q Consensus 275 ~~~~~~~~~p-~~---~~l~~~~~~~~i~hgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~ 346 (401)
.++...+|++ +. .+++.+++ +|.-+. .+++.||+++|+|+|+....+- ...+.+.+.|+.+
T Consensus 244 ~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~----~e~~~~~~~g~~~----- 312 (365)
T cd03825 244 FPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVGGI----PDIVDHGVTGYLA----- 312 (365)
T ss_pred CceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCCCC----hhheeCCCceEEe-----
Confidence 3577778888 33 67888998 777543 4799999999999998765322 2233334567776
Q ss_pred CCCCHHHHHHHHHHHhc
Q 038300 347 GRIQREEMARVIKEVVM 363 (401)
Q Consensus 347 ~~~~~~~l~~~i~~~l~ 363 (401)
...+.+++.++|.++++
T Consensus 313 ~~~~~~~~~~~l~~l~~ 329 (365)
T cd03825 313 KPGDPEDLAEGIEWLLA 329 (365)
T ss_pred CCCCHHHHHHHHHHHHh
Confidence 23478999999999997
No 101
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=96.39 E-value=0.068 Score=50.13 Aligned_cols=89 Identities=19% Similarity=0.261 Sum_probs=59.1
Q ss_pred CCceEEcccCchh---hhcccCCcceEEec----CCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCC
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVSH----CGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKC 346 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~ 346 (401)
..++.+.+++|+. ++++.+++ +|.- +.-+++.||+++|+|+|+-...+-. ..+. ..|..+
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~~~d~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~----e~~~--~~~~~~----- 318 (365)
T cd03809 252 GDRVRFLGYVSDEELAALYRGARA--FVFPSLYEGFGLPVLEAMACGTPVIASNISSLP----EVAG--DAALYF----- 318 (365)
T ss_pred CCeEEECCCCChhHHHHHHhhhhh--hcccchhccCCCCHHHHhcCCCcEEecCCCCcc----ceec--Cceeee-----
Confidence 4578888999775 67888888 5432 2245799999999999996653211 1122 234445
Q ss_pred CCCCHHHHHHHHHHHhcCcccHHHHHHHHHHH
Q 038300 347 GRIQREEMARVIKEVVMEREGEKIKRKTREMG 378 (401)
Q Consensus 347 ~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~ 378 (401)
..-+.+++.++|.+++. ++..+....+-+
T Consensus 319 ~~~~~~~~~~~i~~l~~---~~~~~~~~~~~~ 347 (365)
T cd03809 319 DPLDPEALAAAIERLLE---DPALREELRERG 347 (365)
T ss_pred CCCCHHHHHHHHHHHhc---CHHHHHHHHHHH
Confidence 22378999999999987 565555544433
No 102
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=96.29 E-value=0.14 Score=49.68 Aligned_cols=127 Identities=17% Similarity=0.343 Sum_probs=68.2
Q ss_pred HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHH-hhcCCceEEcccCchh---hhcccCCcceEEe
Q 038300 224 EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLE-RTKERAMVIEGWAPQM---KILGHPSIGGFVS 299 (401)
Q Consensus 224 ~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~---~~l~~~~~~~~i~ 299 (401)
...++++.+...++-|++.+-..+|..+..... ...+-..+.+ .+....+++.++.++. ..+..+|+ ++-
T Consensus 294 ~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~----~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~~~~~DI--~LD 367 (468)
T PF13844_consen 294 LFKISPETLDLWARILKAVPNSRLWLLRFPASG----EARLRRRFAAHGVDPDRIIFSPVAPREEHLRRYQLADI--CLD 367 (468)
T ss_dssp GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTH----HHHHHHHHHHTTS-GGGEEEEE---HHHHHHHGGG-SE--EE-
T ss_pred cccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHH----HHHHHHHHHHcCCChhhEEEcCCCCHHHHHHHhhhCCE--Eee
Confidence 566788888888888988888899987643110 0111111111 1123456666776654 44556776 653
Q ss_pred ---cCCchhHHHHHHhCCcEEecCCccch-hhHHHHHHhhCeeeeeeccCCCCCCHHH-HHHHHHHHhc
Q 038300 300 ---HCGWSSVMESMRLGVPIIAMPMHVDQ-PLNARLVEDVGIGLEVRRNKCGRIQREE-MARVIKEVVM 363 (401)
Q Consensus 300 ---hgG~~s~~eal~~GvP~i~~P~~~dQ-~~na~~~~~~g~g~~l~~~~~~~~~~~~-l~~~i~~~l~ 363 (401)
.+|.+|++|||+.|||+|.+|-..-. ..-|..+...|+.-.+. -+.++ +..|| ++-.
T Consensus 368 T~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA------~s~~eYv~~Av-~La~ 429 (468)
T PF13844_consen 368 TFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIA------DSEEEYVEIAV-RLAT 429 (468)
T ss_dssp -SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-------SSHHHHHHHHH-HHHH
T ss_pred CCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcC------CCHHHHHHHHH-HHhC
Confidence 46889999999999999999965433 33555666679987772 24455 45555 4444
No 103
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=96.23 E-value=0.073 Score=50.85 Aligned_cols=78 Identities=21% Similarity=0.300 Sum_probs=53.6
Q ss_pred eEE-cccCchh---hhcccCCcceEEecC---C-chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCC
Q 038300 277 MVI-EGWAPQM---KILGHPSIGGFVSHC---G-WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGR 348 (401)
Q Consensus 277 ~~~-~~~~p~~---~~l~~~~~~~~i~hg---G-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~ 348 (401)
+.. ..++++. .++.++|+ ||.=+ | -.++.||+++|+|+|+-... .+...+.+.+.|..+ +.++
T Consensus 262 v~~~~~~~~~~~~~~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i~~~~~G~~~---~~~~ 332 (388)
T TIGR02149 262 IIWINKMLPKEELVELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVVVDGETGFLV---PPDN 332 (388)
T ss_pred eEEecCCCCHHHHHHHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHhhCCCceEEc---CCCC
Confidence 443 3566653 77889998 77522 2 35779999999999997653 345556666678888 3332
Q ss_pred CC----HHHHHHHHHHHhc
Q 038300 349 IQ----REEMARVIKEVVM 363 (401)
Q Consensus 349 ~~----~~~l~~~i~~~l~ 363 (401)
.+ .+++.++|.++++
T Consensus 333 ~~~~~~~~~l~~~i~~l~~ 351 (388)
T TIGR02149 333 SDADGFQAELAKAINILLA 351 (388)
T ss_pred CcccchHHHHHHHHHHHHh
Confidence 21 2899999999997
No 104
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=96.14 E-value=0.014 Score=46.52 Aligned_cols=79 Identities=27% Similarity=0.426 Sum_probs=50.4
Q ss_pred CCceEEcccCchh-hhcccCCcceEEecC--C-chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCC
Q 038300 274 ERAMVIEGWAPQM-KILGHPSIGGFVSHC--G-WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRI 349 (401)
Q Consensus 274 ~~~~~~~~~~p~~-~~l~~~~~~~~i~hg--G-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~ 349 (401)
..++.+.+|+++. ++++.+++....+.. | -+++.|++++|+|+|+.+.. .....+..+.|..+ .-
T Consensus 52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~~~~~~~~~~------~~ 120 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIVEEDGCGVLV------AN 120 (135)
T ss_dssp HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS---SEEEE-------TT
T ss_pred CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhheeecCCeEEE------CC
Confidence 3488888998754 889999996665532 2 48999999999999997761 22233335778766 23
Q ss_pred CHHHHHHHHHHHhc
Q 038300 350 QREEMARVIKEVVM 363 (401)
Q Consensus 350 ~~~~l~~~i~~~l~ 363 (401)
+++++.++|+++++
T Consensus 121 ~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 121 DPEELAEAIERLLN 134 (135)
T ss_dssp -HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhc
Confidence 89999999999886
No 105
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=96.11 E-value=0.043 Score=52.19 Aligned_cols=82 Identities=20% Similarity=0.337 Sum_probs=58.6
Q ss_pred CceEEcccCchh-hhcccCCcceEEecC--CchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCH
Q 038300 275 RAMVIEGWAPQM-KILGHPSIGGFVSHC--GWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQR 351 (401)
Q Consensus 275 ~~~~~~~~~p~~-~~l~~~~~~~~i~hg--G~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~ 351 (401)
.++.+.++.++. ++++.+++-.+.++. .-.++.||+++|+|+|+...... +...+.+...|..+ +.-+.
T Consensus 261 ~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g---~~~~v~~~~~G~lv-----~~~d~ 332 (372)
T cd04949 261 DYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYG---PSEIIEDGENGYLV-----PKGDI 332 (372)
T ss_pred ceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCC---cHHHcccCCCceEe-----CCCcH
Confidence 356666676665 889999994455543 24589999999999999654311 23445555678877 33478
Q ss_pred HHHHHHHHHHhcC
Q 038300 352 EEMARVIKEVVME 364 (401)
Q Consensus 352 ~~l~~~i~~~l~~ 364 (401)
+++.++|.+++.+
T Consensus 333 ~~la~~i~~ll~~ 345 (372)
T cd04949 333 EALAEAIIELLND 345 (372)
T ss_pred HHHHHHHHHHHcC
Confidence 9999999999983
No 106
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=96.05 E-value=0.31 Score=47.27 Aligned_cols=99 Identities=17% Similarity=0.293 Sum_probs=72.0
Q ss_pred hhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeee-eeccCCCCCCHHHHHHHHHHHhcCc
Q 038300 287 KILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLE-VRRNKCGRIQREEMARVIKEVVMER 365 (401)
Q Consensus 287 ~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~-l~~~~~~~~~~~~l~~~i~~~l~~~ 365 (401)
.+++++++ +|+.= .=++.-|+..|||.+.+++. +.....+.+.|..-. . +.+.++.+++.+.+.+++++
T Consensus 323 ~iIs~~dl--~ig~R-lHa~I~a~~~gvP~i~i~Y~---~K~~~~~~~lg~~~~~~---~~~~l~~~~Li~~v~~~~~~- 392 (426)
T PRK10017 323 KILGACEL--TVGTR-LHSAIISMNFGTPAIAINYE---HKSAGIMQQLGLPEMAI---DIRHLLDGSLQAMVADTLGQ- 392 (426)
T ss_pred HHHhhCCE--EEEec-chHHHHHHHcCCCEEEeeeh---HHHHHHHHHcCCccEEe---chhhCCHHHHHHHHHHHHhC-
Confidence 88888888 88633 33577788999999999992 555556677777755 4 45778899999999999974
Q ss_pred ccHHHHHHHHHHHHHHHhhcHHHHHHHHHHH
Q 038300 366 EGEKIKRKTREMGEKIKEKGEEEIEWVADEL 396 (401)
Q Consensus 366 ~~~~~~~~a~~~~~~~~~~~~~~~~~~v~~~ 396 (401)
-+.++++.++--+.+++...+.+.++++.+
T Consensus 393 -r~~~~~~l~~~v~~~r~~~~~~~~~~~~~~ 422 (426)
T PRK10017 393 -LPALNARLAEAVSRERQTGMQMVQSVLERI 422 (426)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456777766666666665555666666655
No 107
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.95 E-value=0.3 Score=48.28 Aligned_cols=86 Identities=21% Similarity=0.318 Sum_probs=58.4
Q ss_pred CCceEEcccCchhhhcccCCcceEEecC----CchhHHHHHHhCCcEEecCCccchhhHHHHHHhh------Ceeeeeec
Q 038300 274 ERAMVIEGWAPQMKILGHPSIGGFVSHC----GWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDV------GIGLEVRR 343 (401)
Q Consensus 274 ~~~~~~~~~~p~~~~l~~~~~~~~i~hg----G~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~------g~g~~l~~ 343 (401)
..++.+.+...-.++++.+++ +|.-+ --+++.||+++|+|+|+-.. .-....+.+. ..|+.+
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~----g~~~elv~~~~~~~~g~~G~lv-- 424 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATDV----GSCRELIEGADDEALGPAGEVV-- 424 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECCC----CChHHHhcCCcccccCCceEEE--
Confidence 356777664444588888888 66432 24689999999999999543 3334444442 267777
Q ss_pred cCCCCCCHHHHHHHHHHHhcCcccHHHHHH
Q 038300 344 NKCGRIQREEMARVIKEVVMEREGEKIKRK 373 (401)
Q Consensus 344 ~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~ 373 (401)
...+.+++.++|.++++ ++..+++
T Consensus 425 ---~~~d~~~la~ai~~ll~---~~~~~~~ 448 (475)
T cd03813 425 ---PPADPEALARAILRLLK---DPELRRA 448 (475)
T ss_pred ---CCCCHHHHHHHHHHHhc---CHHHHHH
Confidence 33478999999999998 5544433
No 108
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=95.94 E-value=0.19 Score=48.00 Aligned_cols=79 Identities=18% Similarity=0.151 Sum_probs=57.4
Q ss_pred CCceEEcccCchh---hhcccCCcceEEecCC----chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCC
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVSHCG----WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKC 346 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~hgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~ 346 (401)
..++.+.+++|+. .+|..+++ ++.... -.++.||+++|+|+|+.-..+ ....+.+.+.|... .
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i~~~~~g~~~---~- 348 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETVVDGETGFLC---E- 348 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHhccCCceEEe---C-
Confidence 3578888999876 67888888 664221 257899999999999975543 23344455678776 2
Q ss_pred CCCCHHHHHHHHHHHhcC
Q 038300 347 GRIQREEMARVIKEVVME 364 (401)
Q Consensus 347 ~~~~~~~l~~~i~~~l~~ 364 (401)
.+.+++.++|.+++++
T Consensus 349 --~~~~~~a~~i~~l~~~ 364 (392)
T cd03805 349 --PTPEEFAEAMLKLAND 364 (392)
T ss_pred --CCHHHHHHHHHHHHhC
Confidence 2689999999999983
No 109
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=95.82 E-value=0.097 Score=49.19 Aligned_cols=83 Identities=14% Similarity=0.101 Sum_probs=57.4
Q ss_pred CceEEcccCchh-hhcccCCcceEEec----CCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCC
Q 038300 275 RAMVIEGWAPQM-KILGHPSIGGFVSH----CGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRI 349 (401)
Q Consensus 275 ~~~~~~~~~p~~-~~l~~~~~~~~i~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~ 349 (401)
.++.+.++..+. ++++.+++ +|.- |--+++.||+++|+|+|+-...+- ...+.+ +.|... . .-
T Consensus 249 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~----~~~i~~-~~~~~~---~--~~ 316 (358)
T cd03812 249 DKVIFLGVRNDVPELLQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTITK----EVDLTD-LVKFLS---L--DE 316 (358)
T ss_pred CcEEEecccCCHHHHHHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCch----hhhhcc-CccEEe---C--CC
Confidence 467777765453 88999998 6643 335789999999999998766543 233444 566555 2 22
Q ss_pred CHHHHHHHHHHHhcCcccHHHHH
Q 038300 350 QREEMARVIKEVVMEREGEKIKR 372 (401)
Q Consensus 350 ~~~~l~~~i~~~l~~~~~~~~~~ 372 (401)
+.+++.++|.++++ ++..++
T Consensus 317 ~~~~~a~~i~~l~~---~~~~~~ 336 (358)
T cd03812 317 SPEIWAEEILKLKS---EDRRER 336 (358)
T ss_pred CHHHHHHHHHHHHh---Ccchhh
Confidence 57999999999998 444444
No 110
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=95.68 E-value=0.074 Score=52.79 Aligned_cols=83 Identities=17% Similarity=0.221 Sum_probs=56.2
Q ss_pred CceEEcccCchhhhcccCCcceEEec---CC-chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCC
Q 038300 275 RAMVIEGWAPQMKILGHPSIGGFVSH---CG-WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQ 350 (401)
Q Consensus 275 ~~~~~~~~~p~~~~l~~~~~~~~i~h---gG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~ 350 (401)
.++...++.+..++++.+++ ||.- =| ..++.||+++|+|+|+.-..+- +...+++-.-|..+..+ .+.-+
T Consensus 376 ~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G---~~eiI~~g~nG~lv~~~-~~~~d 449 (500)
T TIGR02918 376 DYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNYG---NPTFIEDNKNGYLIPID-EEEDD 449 (500)
T ss_pred CeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCCC---CHHHccCCCCEEEEeCC-ccccc
Confidence 45677778777799999998 6652 23 3589999999999999765311 23344444568777210 01112
Q ss_pred ----HHHHHHHHHHHhc
Q 038300 351 ----REEMARVIKEVVM 363 (401)
Q Consensus 351 ----~~~l~~~i~~~l~ 363 (401)
.++++++|.++++
T Consensus 450 ~~~~~~~la~~I~~ll~ 466 (500)
T TIGR02918 450 EDQIITALAEKIVEYFN 466 (500)
T ss_pred hhHHHHHHHHHHHHHhC
Confidence 7889999999995
No 111
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=95.62 E-value=0.48 Score=45.08 Aligned_cols=106 Identities=17% Similarity=0.166 Sum_probs=64.4
Q ss_pred CceEEcccC--chh---hhcccCCcceEEecCC----chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccC
Q 038300 275 RAMVIEGWA--PQM---KILGHPSIGGFVSHCG----WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNK 345 (401)
Q Consensus 275 ~~~~~~~~~--p~~---~~l~~~~~~~~i~hgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~ 345 (401)
.++.+..+. ++. .+++.+++ |+.-+. -.++.||+++|+|+|+-...+ ....+.+...|+.+ +
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~~~~g~~~---~ 322 (372)
T cd03792 252 PDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIEDGETGFLV---D 322 (372)
T ss_pred CCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhcccCCceEEe---C
Confidence 456666665 332 67888888 876442 348999999999999976543 22334445667766 2
Q ss_pred CCCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHHH-HHh-hc-HHHHHHHHHHH
Q 038300 346 CGRIQREEMARVIKEVVMEREGEKIKRKTREMGEK-IKE-KG-EEEIEWVADEL 396 (401)
Q Consensus 346 ~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~-~~~-~~-~~~~~~~v~~~ 396 (401)
+.+++..+|.+++. +++.++...+-+.. +.+ .. ...+.++++.+
T Consensus 323 ----~~~~~a~~i~~ll~---~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~ 369 (372)
T cd03792 323 ----TVEEAAVRILYLLR---DPELRRKMGANAREHVRENFLITRHLKDYLYLI 369 (372)
T ss_pred ----CcHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 35677889999997 55544433332222 222 23 44455555444
No 112
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=95.36 E-value=0.23 Score=36.61 Aligned_cols=81 Identities=21% Similarity=0.264 Sum_probs=51.0
Q ss_pred cCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHH
Q 038300 300 HCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMEREGEKIKRKTREMGE 379 (401)
Q Consensus 300 hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~ 379 (401)
++-..-+.|++++|+|+|+-.. ......+.+---++.. . +.+++.++|..++++ ....++.+++-.+
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~~~~~~~~~~-----~--~~~el~~~i~~ll~~--~~~~~~ia~~a~~ 75 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIFEDGEHIITY-----N--DPEELAEKIEYLLEN--PEERRRIAKNARE 75 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHcCCCCeEEEE-----C--CHHHHHHHHHHHHCC--HHHHHHHHHHHHH
Confidence 4445689999999999999876 2233332222245555 2 899999999999983 2344444555555
Q ss_pred HHHhhc--HHHHHHHH
Q 038300 380 KIKEKG--EEEIEWVA 393 (401)
Q Consensus 380 ~~~~~~--~~~~~~~v 393 (401)
.+++.- ...+++++
T Consensus 76 ~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 76 RVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHhCCHHHHHHHHH
Confidence 555432 55555554
No 113
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=95.25 E-value=0.21 Score=47.60 Aligned_cols=107 Identities=13% Similarity=0.118 Sum_probs=64.4
Q ss_pred CCceEEcccCchh---hhcccCCcceEEe------cCC-chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeec
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVS------HCG-WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRR 343 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~------hgG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~ 343 (401)
..|+...+++|+. .+++++++..+-. .++ -+.+.|++++|+|+|+.++. ......+.++..
T Consensus 253 ~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~-------~~~~~~~~~~~~-- 323 (373)
T cd04950 253 LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLP-------EVRRYEDEVVLI-- 323 (373)
T ss_pred CCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcH-------HHHhhcCcEEEe--
Confidence 3588888999865 6788899843322 222 24589999999999987642 222223333333
Q ss_pred cCCCCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc-HHHHHHHHHHHH
Q 038300 344 NKCGRIQREEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG-EEEIEWVADELI 397 (401)
Q Consensus 344 ~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~~ 397 (401)
. -+.+++.++|.+++.++.....++ . .+..++.. ...++++.+.+.
T Consensus 324 --~--~d~~~~~~ai~~~l~~~~~~~~~~-~---~~~~~~~sW~~~a~~~~~~l~ 370 (373)
T cd04950 324 --A--DDPEEFVAAIEKALLEDGPARERR-R---LRLAAQNSWDARAAEMLEALQ 370 (373)
T ss_pred --C--CCHHHHHHHHHHHHhcCCchHHHH-H---HHHHHHCCHHHHHHHHHHHHH
Confidence 1 279999999999775322222222 1 11344455 556666665554
No 114
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=95.24 E-value=0.36 Score=40.23 Aligned_cols=94 Identities=9% Similarity=0.076 Sum_probs=54.1
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHh-hcCC
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILK-NLSP 79 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~p 79 (401)
++||+|+|++........ - |++.+.+..+. +...+. .-.-..+...+. ........+.++-+ ...|
T Consensus 1 q~gh~v~fl~~~~~~~~~--~-----GV~~~~y~~~~--~~~~~~---~~~~~~~e~~~~-rg~av~~a~~~L~~~Gf~P 67 (171)
T PF12000_consen 1 QRGHEVVFLTERKRPPIP--P-----GVRVVRYRPPR--GPTPGT---HPYVRDFEAAVL-RGQAVARAARQLRAQGFVP 67 (171)
T ss_pred CCCCEEEEEecCCCCCCC--C-----CcEEEEeCCCC--CCCCCC---CcccccHHHHHH-HHHHHHHHHHHHHHcCCCC
Confidence 589999999955543322 3 89999886321 111110 000011111111 12223334444443 4478
Q ss_pred CEEEEcCCCCcHHHHHHhc-CCCeEEEec
Q 038300 80 DLLIYDLIQPWAPALASSL-NIPAVYFLV 107 (401)
Q Consensus 80 D~vI~D~~~~~~~~~A~~l-gIP~v~~~~ 107 (401)
|+||...-+..+.-+-+.+ ++|.+++.=
T Consensus 68 DvI~~H~GWGe~Lflkdv~P~a~li~Y~E 96 (171)
T PF12000_consen 68 DVIIAHPGWGETLFLKDVFPDAPLIGYFE 96 (171)
T ss_pred CEEEEcCCcchhhhHHHhCCCCcEEEEEE
Confidence 9999999877777888888 899988754
No 115
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=95.12 E-value=0.53 Score=43.68 Aligned_cols=79 Identities=23% Similarity=0.224 Sum_probs=55.1
Q ss_pred CCceEEcccCchh---hhcccCCcceEEec--CCc-hhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCC
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVSH--CGW-SSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCG 347 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~h--gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~ 347 (401)
..++.+.+++++. .+++.+++-++-++ -|+ .++.||+++|+|+|+-...+- ...+.+...|..+ ..
T Consensus 223 ~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~----~e~i~~~~~g~l~---~~- 294 (335)
T cd03802 223 GPDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAV----PEVVEDGVTGFLV---DS- 294 (335)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCc----hhheeCCCcEEEe---CC-
Confidence 4578888999875 56888888333332 333 489999999999998876432 2233333467777 22
Q ss_pred CCCHHHHHHHHHHHhc
Q 038300 348 RIQREEMARVIKEVVM 363 (401)
Q Consensus 348 ~~~~~~l~~~i~~~l~ 363 (401)
.+++.++|.+++.
T Consensus 295 ---~~~l~~~l~~l~~ 307 (335)
T cd03802 295 ---VEELAAAVARADR 307 (335)
T ss_pred ---HHHHHHHHHHHhc
Confidence 8999999998875
No 116
>PHA01633 putative glycosyl transferase group 1
Probab=94.94 E-value=0.19 Score=47.00 Aligned_cols=81 Identities=22% Similarity=0.249 Sum_probs=55.6
Q ss_pred ceEEc---ccCchh---hhcccCCcceEEecC---C-chhHHHHHHhCCcEEecCC------ccch------hhHHHHHH
Q 038300 276 AMVIE---GWAPQM---KILGHPSIGGFVSHC---G-WSSVMESMRLGVPIIAMPM------HVDQ------PLNARLVE 333 (401)
Q Consensus 276 ~~~~~---~~~p~~---~~l~~~~~~~~i~hg---G-~~s~~eal~~GvP~i~~P~------~~dQ------~~na~~~~ 333 (401)
++.+. +++++. ++++.+++ ||.-+ | -.++.||+++|+|+|+--. .+|+ ..++....
T Consensus 202 ~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~ 279 (335)
T PHA01633 202 NVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYY 279 (335)
T ss_pred cEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhc
Confidence 56665 444543 77888998 88632 3 3478999999999998743 2333 33444444
Q ss_pred --hhCeeeeeeccCCCCCCHHHHHHHHHHHhc
Q 038300 334 --DVGIGLEVRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 334 --~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
+.|.|..+ ...+++++.++|.+++.
T Consensus 280 ~~~~g~g~~~-----~~~d~~~la~ai~~~~~ 306 (335)
T PHA01633 280 DKEHGQKWKI-----HKFQIEDMANAIILAFE 306 (335)
T ss_pred CcccCceeee-----cCCCHHHHHHHHHHHHh
Confidence 24777777 45799999999999864
No 117
>PLN02275 transferase, transferring glycosyl groups
Probab=94.65 E-value=0.14 Score=48.91 Aligned_cols=75 Identities=25% Similarity=0.384 Sum_probs=53.7
Q ss_pred CceEEcc-cCchh---hhcccCCcceEEe----cCC---chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeec
Q 038300 275 RAMVIEG-WAPQM---KILGHPSIGGFVS----HCG---WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRR 343 (401)
Q Consensus 275 ~~~~~~~-~~p~~---~~l~~~~~~~~i~----hgG---~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~ 343 (401)
.|+.+.. |+|+. .+|+.+|+ ||. ..| -+++.||+++|+|+|+....+ +...+++.+.|+.+
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg----~~eiv~~g~~G~lv-- 357 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IGELVKDGKNGLLF-- 357 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecCCC----hHHHccCCCCeEEE--
Confidence 4555544 78765 66999999 763 112 357999999999999975433 55566666789888
Q ss_pred cCCCCCCHHHHHHHHHHHh
Q 038300 344 NKCGRIQREEMARVIKEVV 362 (401)
Q Consensus 344 ~~~~~~~~~~l~~~i~~~l 362 (401)
+ +.+++.++|.+++
T Consensus 358 -~----~~~~la~~i~~l~ 371 (371)
T PLN02275 358 -S----SSSELADQLLELL 371 (371)
T ss_pred -C----CHHHHHHHHHHhC
Confidence 3 4789999998764
No 118
>PRK14098 glycogen synthase; Provisional
Probab=94.65 E-value=0.42 Score=47.44 Aligned_cols=81 Identities=12% Similarity=0.049 Sum_probs=53.1
Q ss_pred CceEEcccCchh---hhcccCCcceEEecCC---c-hhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCC
Q 038300 275 RAMVIEGWAPQM---KILGHPSIGGFVSHCG---W-SSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCG 347 (401)
Q Consensus 275 ~~~~~~~~~p~~---~~l~~~~~~~~i~hgG---~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~ 347 (401)
.++.+..+.+.. .+++.+|+ |+.-+= . .+.+||+++|+|.|+....+-.........+.+.|..+ .
T Consensus 362 ~~V~~~g~~~~~~~~~~~a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~-----~ 434 (489)
T PRK14098 362 EQVSVQTEFTDAFFHLAIAGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIF-----H 434 (489)
T ss_pred CCEEEEEecCHHHHHHHHHhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEe-----C
Confidence 467776777664 78889998 775432 1 37889999999888876543211110011123678877 3
Q ss_pred CCCHHHHHHHHHHHh
Q 038300 348 RIQREEMARVIKEVV 362 (401)
Q Consensus 348 ~~~~~~l~~~i~~~l 362 (401)
..+++++.++|.+++
T Consensus 435 ~~d~~~la~ai~~~l 449 (489)
T PRK14098 435 DYTPEALVAKLGEAL 449 (489)
T ss_pred CCCHHHHHHHHHHHH
Confidence 357899999999876
No 119
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=94.19 E-value=0.97 Score=44.66 Aligned_cols=82 Identities=10% Similarity=0.062 Sum_probs=51.3
Q ss_pred CceEEcccCchh---hhcccCCcceEEecC---Cc-hhHHHHHHhCCcEEecCCcc--chhhHHHHHHhhCeeeeeeccC
Q 038300 275 RAMVIEGWAPQM---KILGHPSIGGFVSHC---GW-SSVMESMRLGVPIIAMPMHV--DQPLNARLVEDVGIGLEVRRNK 345 (401)
Q Consensus 275 ~~~~~~~~~p~~---~~l~~~~~~~~i~hg---G~-~s~~eal~~GvP~i~~P~~~--dQ~~na~~~~~~g~g~~l~~~~ 345 (401)
.++.+....+.. .+++.+++ ||.-. |. .+++||+++|+|.|+-...+ |.-.+...-...+.|+.+
T Consensus 346 ~~v~~~~~~~~~~~~~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~---- 419 (473)
T TIGR02095 346 GNVRVIIGYDEALAHLIYAGADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLF---- 419 (473)
T ss_pred CcEEEEEcCCHHHHHHHHHhCCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEe----
Confidence 345544444443 67888888 77432 33 37899999999999876543 211110000122678887
Q ss_pred CCCCCHHHHHHHHHHHhc
Q 038300 346 CGRIQREEMARVIKEVVM 363 (401)
Q Consensus 346 ~~~~~~~~l~~~i~~~l~ 363 (401)
..-+++++.++|.+++.
T Consensus 420 -~~~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 420 -EEYDPGALLAALSRALR 436 (473)
T ss_pred -CCCCHHHHHHHHHHHHH
Confidence 33478999999999885
No 120
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=94.17 E-value=1.2 Score=44.27 Aligned_cols=62 Identities=19% Similarity=0.275 Sum_probs=46.0
Q ss_pred CCceEEcccCchh-hhcccCCcceEEec---CC-chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeee
Q 038300 274 ERAMVIEGWAPQM-KILGHPSIGGFVSH---CG-WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEV 341 (401)
Q Consensus 274 ~~~~~~~~~~p~~-~~l~~~~~~~~i~h---gG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l 341 (401)
..++.+.+|..+. .+|+.+++ ||.. -| -+++.||+++|+|+|+....+ +...+.+...|+.+
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdvGG----~~EiV~dG~nG~LV 520 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPAGG----SAECFIEGVSGFIL 520 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCCCC----cHHHcccCCcEEEE
Confidence 3567787886554 78999999 8753 23 469999999999999877643 44555566788888
No 121
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=93.79 E-value=0.53 Score=46.49 Aligned_cols=81 Identities=16% Similarity=0.286 Sum_probs=50.8
Q ss_pred CceEEc-ccCchh--hhcccCCcceEEec-----CCchhHHHHHHhCCcEEecCCcc--chhhHHHHHHhhCeeeeeecc
Q 038300 275 RAMVIE-GWAPQM--KILGHPSIGGFVSH-----CGWSSVMESMRLGVPIIAMPMHV--DQPLNARLVEDVGIGLEVRRN 344 (401)
Q Consensus 275 ~~~~~~-~~~p~~--~~l~~~~~~~~i~h-----gG~~s~~eal~~GvP~i~~P~~~--dQ~~na~~~~~~g~g~~l~~~ 344 (401)
.++.+. .+.... .+++.+++ +|.- || .+.+||+++|+|+|+-...+ |--.+...-.+.|.|+.+
T Consensus 351 ~~v~~~~~~~~~~~~~~~~~aDv--~l~pS~~E~~g-l~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~--- 424 (476)
T cd03791 351 GRVAVLIGYDEALAHLIYAGADF--FLMPSRFEPCG-LTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVF--- 424 (476)
T ss_pred CcEEEEEeCCHHHHHHHHHhCCE--EECCCCCCCCc-HHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEe---
Confidence 455543 343222 57888888 7643 33 47899999999999876542 211111111133578888
Q ss_pred CCCCCCHHHHHHHHHHHhc
Q 038300 345 KCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 345 ~~~~~~~~~l~~~i~~~l~ 363 (401)
..-+.+++.++|.+++.
T Consensus 425 --~~~~~~~l~~~i~~~l~ 441 (476)
T cd03791 425 --EGYNADALLAALRRALA 441 (476)
T ss_pred --CCCCHHHHHHHHHHHHH
Confidence 23468999999999885
No 122
>PRK00654 glgA glycogen synthase; Provisional
Probab=93.70 E-value=1.1 Score=44.32 Aligned_cols=70 Identities=13% Similarity=0.222 Sum_probs=46.2
Q ss_pred hhcccCCcceEEecC---Cc-hhHHHHHHhCCcEEecCCcc--chhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHH
Q 038300 287 KILGHPSIGGFVSHC---GW-SSVMESMRLGVPIIAMPMHV--DQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKE 360 (401)
Q Consensus 287 ~~l~~~~~~~~i~hg---G~-~s~~eal~~GvP~i~~P~~~--dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~ 360 (401)
.+++.+++ ||.-+ |. .+.+||+++|+|.|+-...+ |.-.+...-.+.+.|+.+ ..-+++++.++|.+
T Consensus 352 ~~~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv-----~~~d~~~la~~i~~ 424 (466)
T PRK00654 352 RIYAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVF-----DDFNAEDLLRALRR 424 (466)
T ss_pred HHHhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEe-----CCCCHHHHHHHHHH
Confidence 67888998 77532 33 38999999999999875532 211111000223778888 23478999999999
Q ss_pred Hhc
Q 038300 361 VVM 363 (401)
Q Consensus 361 ~l~ 363 (401)
++.
T Consensus 425 ~l~ 427 (466)
T PRK00654 425 ALE 427 (466)
T ss_pred HHH
Confidence 875
No 123
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=93.30 E-value=1.2 Score=43.67 Aligned_cols=101 Identities=15% Similarity=0.094 Sum_probs=67.8
Q ss_pred ccCchh---hhcccCCcceEEecC---Cch-hHHHHHHhCCc----EEecCCccchhhHHHHHHhhCeeeeeeccCCCCC
Q 038300 281 GWAPQM---KILGHPSIGGFVSHC---GWS-SVMESMRLGVP----IIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRI 349 (401)
Q Consensus 281 ~~~p~~---~~l~~~~~~~~i~hg---G~~-s~~eal~~GvP----~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~ 349 (401)
..+++. ++++.+|+ ||.-+ |+| ++.|++++|+| +|+--+.+--.. + +-|+.+ ...
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~----l---~~gllV-----nP~ 407 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQE----L---NGALLV-----NPY 407 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHH----h---CCcEEE-----CCC
Confidence 345554 66888998 77533 644 78899999999 666665543222 2 247777 345
Q ss_pred CHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc-HHHHHHHHHHH
Q 038300 350 QREEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG-EEEIEWVADEL 396 (401)
Q Consensus 350 ~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~ 396 (401)
+.+++.++|.++++.+ .++.+++.+++.+.+.... ..=+.++++.+
T Consensus 408 d~~~lA~aI~~aL~~~-~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 408 DIDGMADAIARALTMP-LEEREERHRAMMDKLRKNDVQRWREDFLSDL 454 (456)
T ss_pred CHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 7899999999999732 3456677777777776655 45566666555
No 124
>PLN02846 digalactosyldiacylglycerol synthase
Probab=93.16 E-value=1.4 Score=43.14 Aligned_cols=72 Identities=8% Similarity=0.134 Sum_probs=50.9
Q ss_pred EcccCchhhhcccCCcceEEecCC----chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHH
Q 038300 279 IEGWAPQMKILGHPSIGGFVSHCG----WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEM 354 (401)
Q Consensus 279 ~~~~~p~~~~l~~~~~~~~i~hgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l 354 (401)
+.++.+..+++...++ ||.-+- -+++.||+++|+|+|+.-..+. ..+.+-+-|... -+.+++
T Consensus 288 f~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~~-----~~v~~~~ng~~~-------~~~~~~ 353 (462)
T PLN02846 288 YPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPSN-----EFFKQFPNCRTY-------DDGKGF 353 (462)
T ss_pred ECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCCc-----ceeecCCceEec-------CCHHHH
Confidence 3455555579988988 887642 4689999999999999876542 333334445444 257899
Q ss_pred HHHHHHHhcC
Q 038300 355 ARVIKEVVME 364 (401)
Q Consensus 355 ~~~i~~~l~~ 364 (401)
.++|.++|.+
T Consensus 354 a~ai~~~l~~ 363 (462)
T PLN02846 354 VRATLKALAE 363 (462)
T ss_pred HHHHHHHHcc
Confidence 9999999974
No 125
>PHA01630 putative group 1 glycosyl transferase
Probab=93.12 E-value=0.82 Score=42.83 Aligned_cols=107 Identities=15% Similarity=0.174 Sum_probs=59.5
Q ss_pred cCchh---hhcccCCcceEE--ecCC--chhHHHHHHhCCcEEecCCcc--chhh---HHHHHHh-----------hCee
Q 038300 282 WAPQM---KILGHPSIGGFV--SHCG--WSSVMESMRLGVPIIAMPMHV--DQPL---NARLVED-----------VGIG 338 (401)
Q Consensus 282 ~~p~~---~~l~~~~~~~~i--~hgG--~~s~~eal~~GvP~i~~P~~~--dQ~~---na~~~~~-----------~g~g 338 (401)
++|+. .+++.+++ || ++.. -.++.||+++|+|+|+.-..+ |.-. |.-.+.. .++|
T Consensus 197 ~v~~~~l~~~y~~aDv--~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G 274 (331)
T PHA01630 197 PLPDDDIYSLFAGCDI--LFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVG 274 (331)
T ss_pred cCCHHHHHHHHHhCCE--EEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccc
Confidence 35544 67888998 65 3322 458999999999999977643 2211 1111100 1345
Q ss_pred eeeeccCCCCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhh-c-HHHHHHHHHHH
Q 038300 339 LEVRRNKCGRIQREEMARVIKEVVMEREGEKIKRKTREMGEKIKEK-G-EEEIEWVADEL 396 (401)
Q Consensus 339 ~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~-~-~~~~~~~v~~~ 396 (401)
..+ ..+.+++.+++.++|.+..++.++++..+-+....+. . ..-++++.+.+
T Consensus 275 ~~v------~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~ 328 (331)
T PHA01630 275 YFL------DPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKIL 328 (331)
T ss_pred ccc------CCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 544 2256778788888887321245555555544444442 3 33344444443
No 126
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=92.96 E-value=0.44 Score=47.49 Aligned_cols=73 Identities=11% Similarity=0.213 Sum_probs=55.8
Q ss_pred ceEEcccCc--hh-hhcccCCcceEEecC---CchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCC
Q 038300 276 AMVIEGWAP--QM-KILGHPSIGGFVSHC---GWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRI 349 (401)
Q Consensus 276 ~~~~~~~~p--~~-~~l~~~~~~~~i~hg---G~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~ 349 (401)
.+.+.++.. +. +++.++.+ +|.=+ |.++..||+++|+|+| .......+++..=|..+ -
T Consensus 410 ~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d~~NG~li-------~ 473 (519)
T TIGR03713 410 RIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEHNKNGYII-------D 473 (519)
T ss_pred EEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEcCCCcEEe-------C
Confidence 567777777 44 88888888 88765 6779999999999999 33344455555667766 2
Q ss_pred CHHHHHHHHHHHhcC
Q 038300 350 QREEMARVIKEVVME 364 (401)
Q Consensus 350 ~~~~l~~~i~~~l~~ 364 (401)
+.+++.++|..+|.+
T Consensus 474 d~~~l~~al~~~L~~ 488 (519)
T TIGR03713 474 DISELLKALDYYLDN 488 (519)
T ss_pred CHHHHHHHHHHHHhC
Confidence 678999999999983
No 127
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.35 E-value=0.34 Score=43.63 Aligned_cols=83 Identities=18% Similarity=0.187 Sum_probs=56.9
Q ss_pred ccCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhh--HHHHHHhh-CeeeeeeccCCCCCCHHHHHHH
Q 038300 281 GWAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPL--NARLVEDV-GIGLEVRRNKCGRIQREEMARV 357 (401)
Q Consensus 281 ~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~--na~~~~~~-g~g~~l~~~~~~~~~~~~l~~~ 357 (401)
.|-...++|.++++ .|.-.|. .+-+++-.|+|+|.+|-.+-|+. -|.+-.++ |+.+.+- . .+.+....
T Consensus 301 sqqsfadiLH~ada--algmAGT-AtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv---~---~~aq~a~~ 371 (412)
T COG4370 301 SQQSFADILHAADA--ALGMAGT-ATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLV---R---PEAQAAAQ 371 (412)
T ss_pred eHHHHHHHHHHHHH--HHHhccc-hHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeec---C---CchhhHHH
Confidence 44445589999888 6755553 35567889999999999999965 67777775 9998882 1 22333333
Q ss_pred -HHHHhcCcccHHHHHHHH
Q 038300 358 -IKEVVMEREGEKIKRKTR 375 (401)
Q Consensus 358 -i~~~l~~~~~~~~~~~a~ 375 (401)
.++++. |+.+...++
T Consensus 372 ~~q~ll~---dp~r~~air 387 (412)
T COG4370 372 AVQELLG---DPQRLTAIR 387 (412)
T ss_pred HHHHHhc---ChHHHHHHH
Confidence 344888 666666554
No 128
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=91.89 E-value=11 Score=35.46 Aligned_cols=106 Identities=19% Similarity=0.232 Sum_probs=68.2
Q ss_pred hhcccCCcceEEecCCchhHHHHHHhCCcEEecCCc-cchhhHHHHHHhhC-eee---eeecc-----CCCCCCHHHHHH
Q 038300 287 KILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMH-VDQPLNARLVEDVG-IGL---EVRRN-----KCGRIQREEMAR 356 (401)
Q Consensus 287 ~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~-~dQ~~na~~~~~~g-~g~---~l~~~-----~~~~~~~~~l~~ 356 (401)
+++..+|+ .+.-+|. -+.|+..+|+|||+.=-. .=-+..|++..... +++ ..++. -+++.+++.|.+
T Consensus 260 ~a~~~aD~--al~aSGT-~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~ 336 (381)
T COG0763 260 KAFAAADA--ALAASGT-ATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLAR 336 (381)
T ss_pred HHHHHhhH--HHHhccH-HHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHH
Confidence 67878888 7777885 478999999999975221 11233555555442 221 11100 135689999999
Q ss_pred HHHHHhcCc-ccHHHHHHHHHHHHHHHhhc-HHHHHHHHHH
Q 038300 357 VIKEVVMER-EGEKIKRKTREMGEKIKEKG-EEEIEWVADE 395 (401)
Q Consensus 357 ~i~~~l~~~-~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~ 395 (401)
++..++.++ .-..+++...++++.++..+ .+.+++++-+
T Consensus 337 ~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~vl~ 377 (381)
T COG0763 337 ALEELLLNGDRREALKEKFRELHQYLREDPASEIAAQAVLE 377 (381)
T ss_pred HHHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 999999853 12577888888888888875 4444444433
No 129
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=89.94 E-value=2.9 Score=41.63 Aligned_cols=110 Identities=19% Similarity=0.310 Sum_probs=70.6
Q ss_pred HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHh-----hcCCceEEcccCchh-----hhcccCC
Q 038300 224 EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLER-----TKERAMVIEGWAPQM-----KILGHPS 293 (401)
Q Consensus 224 ~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~-----~~l~~~~ 293 (401)
...++++.++..++-|++.+-.++|..+...... ..|+.- +.+..+++.+-+... -.|..-.
T Consensus 768 LyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge--------~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~~LaDv~ 839 (966)
T KOG4626|consen 768 LYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE--------QRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRGQLADVC 839 (966)
T ss_pred hhcCCHHHHHHHHHHHHhCCcceeEEEeccccch--------HHHHHHHHHhCCCccceeeccccchHHHHHhhhhhhhc
Confidence 6778999999999999999999999998652111 122211 123344444333322 2232222
Q ss_pred cceEEecCCchhHHHHHHhCCcEEecCCccchhhHHH-HHHhhCeeeeee
Q 038300 294 IGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNAR-LVEDVGIGLEVR 342 (401)
Q Consensus 294 ~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~-~~~~~g~g~~l~ 342 (401)
++-+++ .|+.|.++.++.|||||.+|....-...|. .+...|+|-.+.
T Consensus 840 LDTplc-nGhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hlia 888 (966)
T KOG4626|consen 840 LDTPLC-NGHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIA 888 (966)
T ss_pred ccCcCc-CCcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHh
Confidence 333665 468899999999999999998655544444 444569998763
No 130
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=89.04 E-value=0.23 Score=40.24 Aligned_cols=85 Identities=15% Similarity=0.140 Sum_probs=39.2
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHH--hhcC
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNIL--KNLS 78 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--~~~~ 78 (401)
++||+|++++.......-+.. ..+++++.++++.... .... .. ....+.+++ ++.+
T Consensus 16 ~~G~~V~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~------~~~~-----~~--------~~~~~~~~l~~~~~~ 73 (160)
T PF13579_consen 16 ARGHEVTVVTPQPDPEDDEEE---EDGVRVHRLPLPRRPW------PLRL-----LR--------FLRRLRRLLAARRER 73 (160)
T ss_dssp HTT-EEEEEEE---GGG-SEE---ETTEEEEEE--S-SSS------GGGH-----CC--------HHHHHHHHCHHCT--
T ss_pred HCCCEEEEEecCCCCcccccc---cCCceEEeccCCccch------hhhh-----HH--------HHHHHHHHHhhhccC
Confidence 379999999976655532111 1388888886442210 0000 00 113445555 6779
Q ss_pred CCEEEEcCC-CCcHHHHHH-hcCCCeEEEec
Q 038300 79 PDLLIYDLI-QPWAPALAS-SLNIPAVYFLV 107 (401)
Q Consensus 79 pD~vI~D~~-~~~~~~~A~-~lgIP~v~~~~ 107 (401)
||+|.+... ......++. ..++|.|....
T Consensus 74 ~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h 104 (160)
T PF13579_consen 74 PDVVHAHSPTAGLVAALARRRRGIPLVVTVH 104 (160)
T ss_dssp -SEEEEEHHHHHHHHHHHHHHHT--EEEE-S
T ss_pred CeEEEecccchhHHHHHHHHccCCcEEEEEC
Confidence 999987642 222334444 77999988765
No 131
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=88.98 E-value=2.5 Score=36.24 Aligned_cols=50 Identities=22% Similarity=0.236 Sum_probs=37.4
Q ss_pred CCceEEcccCch-h---hhcccCCcceEEecCC----chhHHHHHHhCCcEEecCCccch
Q 038300 274 ERAMVIEGWAPQ-M---KILGHPSIGGFVSHCG----WSSVMESMRLGVPIIAMPMHVDQ 325 (401)
Q Consensus 274 ~~~~~~~~~~p~-~---~~l~~~~~~~~i~hgG----~~s~~eal~~GvP~i~~P~~~dQ 325 (401)
..++.+.++++. . .+++.+++ +|+-.. .+++.||+++|+|+|+-+..+.+
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~ 217 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGGPP 217 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCCcc
Confidence 557888888622 2 44445888 777775 68999999999999998876544
No 132
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=88.54 E-value=2.2 Score=41.95 Aligned_cols=101 Identities=13% Similarity=0.104 Sum_probs=60.4
Q ss_pred cccCchh---hhcccCCcceEEe---cCCch-hHHHHHHhCCc----EEecCCccchhhHHHHHHhhCeeeeeeccCCCC
Q 038300 280 EGWAPQM---KILGHPSIGGFVS---HCGWS-SVMESMRLGVP----IIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGR 348 (401)
Q Consensus 280 ~~~~p~~---~~l~~~~~~~~i~---hgG~~-s~~eal~~GvP----~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~ 348 (401)
..++++. ++++.+++ ||. +-|+| ++.||+++|+| +|+--..+--.. ..-|+.+ ..
T Consensus 346 ~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~-------~~~g~lv-----~p 411 (460)
T cd03788 346 YRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE-------LSGALLV-----NP 411 (460)
T ss_pred eCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccchhh-------cCCCEEE-----CC
Confidence 3566655 67888998 764 33544 67899999999 544433321111 1346666 33
Q ss_pred CCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc-HHHHHHHHHH
Q 038300 349 IQREEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG-EEEIEWVADE 395 (401)
Q Consensus 349 ~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~ 395 (401)
.+.+++.++|.++++++ .+..+++.++..+.+.+.. ..-+.+++..
T Consensus 412 ~d~~~la~ai~~~l~~~-~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~ 458 (460)
T cd03788 412 YDIDEVADAIHRALTMP-LEERRERHRKLREYVRTHDVQAWANSFLDD 458 (460)
T ss_pred CCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 57899999999999742 2334444555555555444 4444554443
No 133
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=87.75 E-value=4.2 Score=32.23 Aligned_cols=81 Identities=15% Similarity=0.233 Sum_probs=50.2
Q ss_pred CCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhcCCCE
Q 038300 2 SNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNLSPDL 81 (401)
Q Consensus 2 rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~ 81 (401)
+||+|++++........... .++.+..++.+ . ......+ . +. .+..++++.+||+
T Consensus 23 ~g~~V~ii~~~~~~~~~~~~----~~i~~~~~~~~-----------~----k~~~~~~----~-~~-~l~k~ik~~~~Dv 77 (139)
T PF13477_consen 23 RGYDVHIITPRNDYEKYEII----EGIKVIRLPSP-----------R----KSPLNYI----K-YF-RLRKIIKKEKPDV 77 (139)
T ss_pred CCCEEEEEEcCCCchhhhHh----CCeEEEEecCC-----------C----CccHHHH----H-HH-HHHHHhccCCCCE
Confidence 69999999985554333322 28888877411 0 0111111 1 23 6789999999999
Q ss_pred EEEcCCCCc---HHHHHHhcC-CCeEEEec
Q 038300 82 LIYDLIQPW---APALASSLN-IPAVYFLV 107 (401)
Q Consensus 82 vI~D~~~~~---~~~~A~~lg-IP~v~~~~ 107 (401)
|.+-...+. +..++...| +|.|....
T Consensus 78 Ih~h~~~~~~~~~~l~~~~~~~~~~i~~~h 107 (139)
T PF13477_consen 78 IHCHTPSPYGLFAMLAKKLLKNKKVIYTVH 107 (139)
T ss_pred EEEecCChHHHHHHHHHHHcCCCCEEEEec
Confidence 987755443 334557778 88886554
No 134
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=85.89 E-value=8.1 Score=40.89 Aligned_cols=95 Identities=15% Similarity=0.158 Sum_probs=61.3
Q ss_pred hhcccCCcceEEecC---Cch-hHHHHHHhCCc---EEecC-CccchhhHHHHHHhhC-eeeeeeccCCCCCCHHHHHHH
Q 038300 287 KILGHPSIGGFVSHC---GWS-SVMESMRLGVP---IIAMP-MHVDQPLNARLVEDVG-IGLEVRRNKCGRIQREEMARV 357 (401)
Q Consensus 287 ~~l~~~~~~~~i~hg---G~~-s~~eal~~GvP---~i~~P-~~~dQ~~na~~~~~~g-~g~~l~~~~~~~~~~~~l~~~ 357 (401)
.+++.+++ ||.-+ |+| +..|++++|.| +++++ +.+--. . .| .|+.+ ...+.++++++
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~----~---l~~~allV-----nP~D~~~lA~A 436 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQ----S---LGAGALLV-----NPWNITEVSSA 436 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCcCchh----h---hcCCeEEE-----CCCCHHHHHHH
Confidence 78888999 77543 777 66799999999 44444 333211 1 23 57777 34689999999
Q ss_pred HHHHhcCcccHHHHHHHHHHHHHHHhhc-HHHHHHHHHHH
Q 038300 358 IKEVVMEREGEKIKRKTREMGEKIKEKG-EEEIEWVADEL 396 (401)
Q Consensus 358 i~~~l~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~ 396 (401)
|.++|+-+ ....+++.+++.+.++... ..=+..+++.+
T Consensus 437 I~~aL~m~-~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l 475 (797)
T PLN03063 437 IKEALNMS-DEERETRHRHNFQYVKTHSAQKWADDFMSEL 475 (797)
T ss_pred HHHHHhCC-HHHHHHHHHHHHHhhhhCCHHHHHHHHHHHH
Confidence 99999721 3445556666666666655 44444455444
No 135
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=84.92 E-value=8.5 Score=40.30 Aligned_cols=50 Identities=24% Similarity=0.354 Sum_probs=38.0
Q ss_pred hhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHh
Q 038300 304 SSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVV 362 (401)
Q Consensus 304 ~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l 362 (401)
.++.||+++|+|+|+--..+ .+..+++..-|..+ +.-+++++.++|.+++
T Consensus 658 LvvLEAMAcGlPVVAT~~GG----~~EiV~dg~tGfLV-----dp~D~eaLA~aL~~ll 707 (784)
T TIGR02470 658 LTVLEAMTCGLPTFATRFGG----PLEIIQDGVSGFHI-----DPYHGEEAAEKIVDFF 707 (784)
T ss_pred HHHHHHHHcCCCEEEcCCCC----HHHHhcCCCcEEEe-----CCCCHHHHHHHHHHHH
Confidence 48999999999999976543 44455555678888 2347899999998876
No 136
>PRK14099 glycogen synthase; Provisional
Probab=84.72 E-value=18 Score=35.86 Aligned_cols=79 Identities=11% Similarity=0.248 Sum_probs=44.3
Q ss_pred EEcccCchh-hhc-ccCCcceEEec---CC-chhHHHHHHhCCcEEecCCcc--chhhHHHHH-H--hhCeeeeeeccCC
Q 038300 278 VIEGWAPQM-KIL-GHPSIGGFVSH---CG-WSSVMESMRLGVPIIAMPMHV--DQPLNARLV-E--DVGIGLEVRRNKC 346 (401)
Q Consensus 278 ~~~~~~p~~-~~l-~~~~~~~~i~h---gG-~~s~~eal~~GvP~i~~P~~~--dQ~~na~~~-~--~~g~g~~l~~~~~ 346 (401)
.+.+|-.+. .++ +.+|+ ||.- =| -.+.+||+++|.|.|+....+ |--.+.... + ..+.|+.+
T Consensus 354 ~~~G~~~~l~~~~~a~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~----- 426 (485)
T PRK14099 354 VVIGYDEALAHLIQAGADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQF----- 426 (485)
T ss_pred EEeCCCHHHHHHHHhcCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEe-----
Confidence 344563333 333 45777 7752 22 247899999997666654422 211111101 1 11468877
Q ss_pred CCCCHHHHHHHHHH---Hhc
Q 038300 347 GRIQREEMARVIKE---VVM 363 (401)
Q Consensus 347 ~~~~~~~l~~~i~~---~l~ 363 (401)
+.-+.+++.++|.+ +++
T Consensus 427 ~~~d~~~La~ai~~a~~l~~ 446 (485)
T PRK14099 427 SPVTADALAAALRKTAALFA 446 (485)
T ss_pred CCCCHHHHHHHHHHHHHHhc
Confidence 33478999999987 555
No 137
>PLN00142 sucrose synthase
Probab=83.65 E-value=11 Score=39.50 Aligned_cols=60 Identities=23% Similarity=0.319 Sum_probs=40.7
Q ss_pred CCcceEEec---CCc-hhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHh
Q 038300 292 PSIGGFVSH---CGW-SSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVV 362 (401)
Q Consensus 292 ~~~~~~i~h---gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l 362 (401)
.++ ||.- =|+ .++.||+++|+|+|+-...+ ....+++-..|..+ + .-+.+++.++|.+++
T Consensus 667 aDV--fVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV~dG~tG~LV---~--P~D~eaLA~aI~~lL 730 (815)
T PLN00142 667 KGA--FVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEIIVDGVSGFHI---D--PYHGDEAANKIADFF 730 (815)
T ss_pred CCE--EEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcCCCcEEEe---C--CCCHHHHHHHHHHHH
Confidence 345 7753 233 38999999999999976544 33445555678888 2 246788888887654
No 138
>PRK10125 putative glycosyl transferase; Provisional
Probab=83.52 E-value=8.1 Score=37.32 Aligned_cols=60 Identities=20% Similarity=0.166 Sum_probs=41.3
Q ss_pred hhcccCCcceEEecCC----chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHH
Q 038300 287 KILGHPSIGGFVSHCG----WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVI 358 (401)
Q Consensus 287 ~~l~~~~~~~~i~hgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i 358 (401)
++++.+++ ||.-+= -+++.||+++|+|+|+-...+ -++ +.+.+.|+.+ +. -+.+++.+++
T Consensus 302 ~~y~~aDv--fV~pS~~Egfp~vilEAmA~G~PVVat~~gG-~~E----iv~~~~G~lv---~~--~d~~~La~~~ 365 (405)
T PRK10125 302 SALNQMDA--LVFSSRVDNYPLILCEALSIGVPVIATHSDA-ARE----VLQKSGGKTV---SE--EEVLQLAQLS 365 (405)
T ss_pred HHHHhCCE--EEECCccccCcCHHHHHHHcCCCEEEeCCCC-hHH----hEeCCcEEEE---CC--CCHHHHHhcc
Confidence 66777888 776432 458999999999999998875 121 2333568888 32 3677777654
No 139
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=83.38 E-value=5.7 Score=36.81 Aligned_cols=122 Identities=11% Similarity=0.093 Sum_probs=67.8
Q ss_pred CCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcc--cCchh-hhcccCCcceEEecCC
Q 038300 226 FLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEG--WAPQM-KILGHPSIGGFVSHCG 302 (401)
Q Consensus 226 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~-~~l~~~~~~~~i~hgG 302 (401)
..+.+.+.++++.|.+.+.++++..+.... ......+.+..... .+.+ -+++. .+++++++ ||+. -
T Consensus 194 ~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e------~~~~~~i~~~~~~~--~l~g~~sL~el~ali~~a~l--~I~~-D 262 (319)
T TIGR02193 194 TWPEERWRELARLLLARGLQIVLPWGNDAE------KQRAERIAEALPGA--VVLPKMSLAEVAALLAGADA--VVGV-D 262 (319)
T ss_pred CCCHHHHHHHHHHHHHCCCeEEEeCCCHHH------HHHHHHHHhhCCCC--eecCCCCHHHHHHHHHcCCE--EEeC-C
Confidence 345677788888887667777665442110 00111122211112 2222 23444 89999999 9984 4
Q ss_pred chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCee-eeeeccCCCCCCHHHHHHHHHHHh
Q 038300 303 WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIG-LEVRRNKCGRIQREEMARVIKEVV 362 (401)
Q Consensus 303 ~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g-~~l~~~~~~~~~~~~l~~~i~~~l 362 (401)
.|.+.=|.+.|+|+|++ ++ +.+..+..=.|-. ..+....-..++++++.++|+++|
T Consensus 263 Sgp~HlAaa~g~P~i~l--fg--~t~p~~~~P~~~~~~~~~~~~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 263 TGLTHLAAALDKPTVTL--YG--ATDPGRTGGYGKPNVALLGESGANPTPDEVLAALEELL 319 (319)
T ss_pred ChHHHHHHHcCCCEEEE--EC--CCCHhhcccCCCCceEEccCccCCCCHHHHHHHHHhhC
Confidence 57888899999999986 21 1112221111111 111111246789999999998764
No 140
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=82.76 E-value=6.6 Score=38.29 Aligned_cols=78 Identities=6% Similarity=0.120 Sum_probs=56.3
Q ss_pred CceEE-cccCc-hh-hhcccCCcceEEecCC--chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCC
Q 038300 275 RAMVI-EGWAP-QM-KILGHPSIGGFVSHCG--WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRI 349 (401)
Q Consensus 275 ~~~~~-~~~~p-~~-~~l~~~~~~~~i~hgG--~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~ 349 (401)
.|+++ .++.+ +. +++..+++-+-++|++ ..++.||+.+|+|+++.=...... ..+.. |-.+ ..-
T Consensus 328 ~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~---~~i~~---g~l~-----~~~ 396 (438)
T TIGR02919 328 DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNR---DFIAS---ENIF-----EHN 396 (438)
T ss_pred CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCc---ccccC---Ccee-----cCC
Confidence 45554 45677 33 9999999988888876 679999999999999876543221 12222 5455 223
Q ss_pred CHHHHHHHHHHHhc
Q 038300 350 QREEMARVIKEVVM 363 (401)
Q Consensus 350 ~~~~l~~~i~~~l~ 363 (401)
+.+++.++|.++|.
T Consensus 397 ~~~~m~~~i~~lL~ 410 (438)
T TIGR02919 397 EVDQLISKLKDLLN 410 (438)
T ss_pred CHHHHHHHHHHHhc
Confidence 68999999999998
No 141
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=82.23 E-value=17 Score=36.21 Aligned_cols=124 Identities=12% Similarity=0.140 Sum_probs=72.1
Q ss_pred hCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHH-hhcCCceEEcccCchh---hhcccCCcceEEe-
Q 038300 225 YFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLE-RTKERAMVIEGWAPQM---KILGHPSIGGFVS- 299 (401)
Q Consensus 225 ~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~---~~l~~~~~~~~i~- 299 (401)
....++.+..-++-|...+-.++|..+.. ...+....+-+-+.+ .++...+++.+-.|.. +-+.-+|+ |+.
T Consensus 440 ~K~~pev~~~wmqIL~~vP~Svl~L~~~~--~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~~iADl--vLDT 515 (620)
T COG3914 440 FKITPEVFALWMQILSAVPNSVLLLKAGG--DDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARYGIADL--VLDT 515 (620)
T ss_pred ccCCHHHHHHHHHHHHhCCCcEEEEecCC--CcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhhchhhe--eeec
Confidence 34555666666666666677788887642 111111111111111 1223345555555543 55556777 775
Q ss_pred --cCCchhHHHHHHhCCcEEecCCccchhh--HHHHHHh-hCeeeeeeccCCCCCCHHHHHHHHH
Q 038300 300 --HCGWSSVMESMRLGVPIIAMPMHVDQPL--NARLVED-VGIGLEVRRNKCGRIQREEMARVIK 359 (401)
Q Consensus 300 --hgG~~s~~eal~~GvP~i~~P~~~dQ~~--na~~~~~-~g~g~~l~~~~~~~~~~~~l~~~i~ 359 (401)
=||+.|+.|+++.|||+|.++ |+|+- |+..+.. +|+--.+ -+-.++=+.++|+
T Consensus 516 yPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~v-----A~s~~dYV~~av~ 573 (620)
T COG3914 516 YPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELV-----ADSRADYVEKAVA 573 (620)
T ss_pred ccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhh-----cCCHHHHHHHHHH
Confidence 489999999999999999976 77765 5555554 4777666 1223455777774
No 142
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=78.45 E-value=34 Score=34.51 Aligned_cols=78 Identities=15% Similarity=0.222 Sum_probs=46.4
Q ss_pred hhhhcccCCcceEEe-cCCch-hHHHHHHhCCcEEecCCccc-hhhHHHHHHhh-CeeeeeeccCCC--CCCHHHHHHHH
Q 038300 285 QMKILGHPSIGGFVS-HCGWS-SVMESMRLGVPIIAMPMHVD-QPLNARLVEDV-GIGLEVRRNKCG--RIQREEMARVI 358 (401)
Q Consensus 285 ~~~~l~~~~~~~~i~-hgG~~-s~~eal~~GvP~i~~P~~~d-Q~~na~~~~~~-g~g~~l~~~~~~--~~~~~~l~~~i 358 (401)
..+++..+++.++=| +=|+| ++.||+++|+|+|+-...+= .... ..+... ..|+.+...+.. .-+.++|++++
T Consensus 468 y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m 546 (590)
T cd03793 468 YEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHIEDPESYGIYIVDRRFKSPDESVQQLTQYM 546 (590)
T ss_pred hHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHhccCCCceEEEecCCccchHHHHHHHHHHH
Confidence 447777888833333 33544 89999999999999887432 2211 112122 257776321111 23567788888
Q ss_pred HHHhc
Q 038300 359 KEVVM 363 (401)
Q Consensus 359 ~~~l~ 363 (401)
.+++.
T Consensus 547 ~~~~~ 551 (590)
T cd03793 547 YEFCQ 551 (590)
T ss_pred HHHhC
Confidence 88775
No 143
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=78.23 E-value=4.7 Score=38.33 Aligned_cols=111 Identities=16% Similarity=0.229 Sum_probs=65.9
Q ss_pred CceEEc-ccCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHH----HHhhCeeeeeeccCCCCC
Q 038300 275 RAMVIE-GWAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARL----VEDVGIGLEVRRNKCGRI 349 (401)
Q Consensus 275 ~~~~~~-~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~----~~~~g~g~~l~~~~~~~~ 349 (401)
.+++.. +..+-.++|..+++ .||-.. +.+.|.+..++|+|......|.+.+.+- ..+...|..+ -
T Consensus 252 ~~i~~~~~~~~~~~ll~~aDi--LITDyS-Si~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~-------~ 321 (369)
T PF04464_consen 252 SNIIFVSDNEDIYDLLAAADI--LITDYS-SIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIV-------Y 321 (369)
T ss_dssp TTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EE-------S
T ss_pred CcEEECCCCCCHHHHHHhcCE--EEEech-hHHHHHHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCcee-------C
Confidence 355543 33445699999999 999884 5789999999999988877666533210 1111222222 4
Q ss_pred CHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc-HHHHHHHHHHHH
Q 038300 350 QREEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG-EEEIEWVADELI 397 (401)
Q Consensus 350 ~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~~ 397 (401)
+.++|.++|+.++.+ +..++++.++..+.+-..- .++.+++++.+.
T Consensus 322 ~~~eL~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~Dg~s~eri~~~I~ 368 (369)
T PF04464_consen 322 NFEELIEAIENIIEN--PDEYKEKREKFRDKFFKYNDGNSSERIVNYIF 368 (369)
T ss_dssp SHHHHHHHHTTHHHH--HHHTHHHHHHHHHHHSTT--S-HHHHHHHHHH
T ss_pred CHHHHHHHHHhhhhC--CHHHHHHHHHHHHHhCCCCCchHHHHHHHHHh
Confidence 679999999998863 3455666677766665532 455666666653
No 144
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=77.64 E-value=38 Score=30.55 Aligned_cols=78 Identities=27% Similarity=0.422 Sum_probs=50.2
Q ss_pred CceEEcccCch---hhhcccCCcceEEec---CCchh-HHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCC
Q 038300 275 RAMVIEGWAPQ---MKILGHPSIGGFVSH---CGWSS-VMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCG 347 (401)
Q Consensus 275 ~~~~~~~~~p~---~~~l~~~~~~~~i~h---gG~~s-~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~ 347 (401)
.++....++++ ..+++.+++ ++.- .|.|. +.|++++|+|+|+-...+ ....+.+.+.|... ..
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~----~~e~~~~~~~g~~~----~~ 326 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDVGG----IPEVVEDGETGLLV----PP 326 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCCCC----hHHHhcCCCceEec----CC
Confidence 56777788882 266777777 6555 35543 599999999997766541 22222222246633 12
Q ss_pred CCCHHHHHHHHHHHhc
Q 038300 348 RIQREEMARVIKEVVM 363 (401)
Q Consensus 348 ~~~~~~l~~~i~~~l~ 363 (401)
...+++.+++..+++
T Consensus 327 -~~~~~~~~~i~~~~~ 341 (381)
T COG0438 327 -GDVEELADALEQLLE 341 (381)
T ss_pred -CCHHHHHHHHHHHhc
Confidence 268999999999997
No 145
>PLN02939 transferase, transferring glycosyl groups
Probab=76.11 E-value=28 Score=37.32 Aligned_cols=81 Identities=14% Similarity=0.201 Sum_probs=52.9
Q ss_pred CceEEcccCchh---hhcccCCcceEEec-----CCchhHHHHHHhCCcEEecCCcc--chhhH--HHHHH-hhCeeeee
Q 038300 275 RAMVIEGWAPQM---KILGHPSIGGFVSH-----CGWSSVMESMRLGVPIIAMPMHV--DQPLN--ARLVE-DVGIGLEV 341 (401)
Q Consensus 275 ~~~~~~~~~p~~---~~l~~~~~~~~i~h-----gG~~s~~eal~~GvP~i~~P~~~--dQ~~n--a~~~~-~~g~g~~l 341 (401)
.++.+..+.+.. .+++.+|+ ||.- || .+++||+++|+|.|+....+ |--.+ ...+. .-+-|..+
T Consensus 837 drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfG-LvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf 913 (977)
T PLN02939 837 NNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCG-LTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF 913 (977)
T ss_pred CeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCc-HHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe
Confidence 457666677654 58988998 8853 34 47999999999999876644 21111 11111 12567777
Q ss_pred eccCCCCCCHHHHHHHHHHHhc
Q 038300 342 RRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 342 ~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
...+++++.++|.+++.
T Consensus 914 -----~~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 914 -----LTPDEQGLNSALERAFN 930 (977)
T ss_pred -----cCCCHHHHHHHHHHHHH
Confidence 23478889888888763
No 146
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=75.79 E-value=12 Score=34.29 Aligned_cols=42 Identities=26% Similarity=0.411 Sum_probs=35.8
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEeccc
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFLVSS 109 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~ 109 (401)
.-.|.++..+.+||+.|. -..+-...+|--+|+|.|.+.-..
T Consensus 73 ~~~L~ki~~~~kpdv~i~-~~s~~l~rvafgLg~psIi~~D~e 114 (346)
T COG1817 73 VYKLSKIIAEFKPDVAIG-KHSPELPRVAFGLGIPSIIFVDNE 114 (346)
T ss_pred HHHHHHHHhhcCCceEee-cCCcchhhHHhhcCCceEEecCCh
Confidence 345888899999999998 667888999999999999997654
No 147
>PLN02316 synthase/transferase
Probab=75.20 E-value=1.2e+02 Score=33.13 Aligned_cols=80 Identities=11% Similarity=0.089 Sum_probs=50.5
Q ss_pred ceEEcccCchh---hhcccCCcceEEec-----CCchhHHHHHHhCCcEEecCCcc--chhh-------HHHHHHhhCee
Q 038300 276 AMVIEGWAPQM---KILGHPSIGGFVSH-----CGWSSVMESMRLGVPIIAMPMHV--DQPL-------NARLVEDVGIG 338 (401)
Q Consensus 276 ~~~~~~~~p~~---~~l~~~~~~~~i~h-----gG~~s~~eal~~GvP~i~~P~~~--dQ~~-------na~~~~~~g~g 338 (401)
++.+....+.. .+++.+|+ ||.- || .+.+||+++|+|.|+-...+ |.-. +++..-..+-|
T Consensus 901 rV~f~g~~de~lah~iyaaADi--flmPS~~EP~G-LvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tG 977 (1036)
T PLN02316 901 RARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCG-LTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNG 977 (1036)
T ss_pred eEEEEecCCHHHHHHHHHhCcE--EEeCCcccCcc-HHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCce
Confidence 45443333443 58888888 8853 34 58999999999888765532 1111 11100012568
Q ss_pred eeeeccCCCCCCHHHHHHHHHHHhc
Q 038300 339 LEVRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 339 ~~l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
+.+ ...+++.|..+|.+++.
T Consensus 978 flf-----~~~d~~aLa~AL~raL~ 997 (1036)
T PLN02316 978 FSF-----DGADAAGVDYALNRAIS 997 (1036)
T ss_pred EEe-----CCCCHHHHHHHHHHHHh
Confidence 777 44578999999999986
No 148
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=75.10 E-value=8.9 Score=31.84 Aligned_cols=44 Identities=27% Similarity=0.461 Sum_probs=29.6
Q ss_pred hhchHHHHHHHhhcCCCEEEEcCCCCcHHHHH-----Hhc-CCCeEEEec
Q 038300 64 DMASPSFFNILKNLSPDLLIYDLIQPWAPALA-----SSL-NIPAVYFLV 107 (401)
Q Consensus 64 ~~~~~~l~~~l~~~~pD~vI~D~~~~~~~~~A-----~~l-gIP~v~~~~ 107 (401)
....+.+.++|++.+||+||+-..++.+..++ ..+ ++|.+++.|
T Consensus 75 ~~~~~~l~~~l~~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvT 124 (169)
T PF06925_consen 75 RLFARRLIRLLREFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVT 124 (169)
T ss_pred HHHHHHHHHHHhhcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEc
Confidence 34566889999999999999886654444122 223 477776655
No 149
>PRK13931 stationary phase survival protein SurE; Provisional
Probab=69.97 E-value=29 Score=31.17 Aligned_cols=87 Identities=15% Similarity=0.294 Sum_probs=45.5
Q ss_pred CeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhcCCCEE
Q 038300 3 NFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNLSPDLL 82 (401)
Q Consensus 3 G~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~v 82 (401)
|++|+++.++..++-+-.+.+....+++..+. + +......-| .+...-.+..++...+||+|
T Consensus 30 ~~~V~VVAP~~eqSg~ghaiT~~~pl~~~~~~----~----~~yav~GTP----------aDCV~lal~~~~~~~~pDlV 91 (261)
T PRK13931 30 DGEVWTVAPAFEQSGVGHCISYTHPMMIAELG----P----RRFAAEGSP----------ADCVLAALYDVMKDAPPDLV 91 (261)
T ss_pred CCeEEEEeCCCCCCCCcccccCCCCeEEEEeC----C----CeEEEcCch----------HHHHHHHHHHhcCCCCCCEE
Confidence 57999999888776555543322345555442 1 100000111 11122233444433579999
Q ss_pred EE----------cCCCCcHH---HHHHhcCCCeEEEec
Q 038300 83 IY----------DLIQPWAP---ALASSLNIPAVYFLV 107 (401)
Q Consensus 83 I~----------D~~~~~~~---~~A~~lgIP~v~~~~ 107 (401)
|+ |.+.+... .-|..+|||.|.++.
T Consensus 92 vSGIN~G~N~g~~v~ySGTVgAA~Ea~~~GiPsiA~S~ 129 (261)
T PRK13931 92 LSGVNRGNNSAENVLYSGTVGGAMEAALQGLPAIALSQ 129 (261)
T ss_pred EECCccCCCCCcCcccchhHHHHHHHHhcCCCeEEEEe
Confidence 97 33333333 334567999999875
No 150
>PLN00142 sucrose synthase
Probab=69.00 E-value=19 Score=37.95 Aligned_cols=31 Identities=26% Similarity=0.309 Sum_probs=24.0
Q ss_pred CCCEEEEcCCCC--cHHHHHHhcCCCeEEEecc
Q 038300 78 SPDLLIYDLIQP--WAPALASSLNIPAVYFLVS 108 (401)
Q Consensus 78 ~pD~vI~D~~~~--~~~~~A~~lgIP~v~~~~~ 108 (401)
+||+|++.+... .|..+++++|||.|.+..+
T Consensus 408 ~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~Hs 440 (815)
T PLN00142 408 KPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHA 440 (815)
T ss_pred CCCEEEECCccHHHHHHHHHHHhCCCEEEEccc
Confidence 699999884422 3567889999999988764
No 151
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=68.35 E-value=12 Score=32.03 Aligned_cols=96 Identities=16% Similarity=0.183 Sum_probs=48.0
Q ss_pred CCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhcCCCE
Q 038300 2 SNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNLSPDL 81 (401)
Q Consensus 2 rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~ 81 (401)
.||+|+++.+...++-.-.+......++..... +. ..+.+.... .... ...+...-.|..++.+.+||+
T Consensus 26 ~g~~V~VvAP~~~~Sg~g~sit~~~pl~~~~~~-~~--~~~~~~~~~------~v~G--TPaDcv~~al~~~~~~~~pDL 94 (196)
T PF01975_consen 26 LGHDVVVVAPDSEQSGTGHSITLHKPLRVTEVE-PG--HDPGGVEAY------AVSG--TPADCVKLALDGLLPDKKPDL 94 (196)
T ss_dssp TSSEEEEEEESSSTTTSTTS--SSSEEEEEEEE--T--TCCSTTEEE------EESS---HHHHHHHHHHCTSTTSS-SE
T ss_pred cCCeEEEEeCCCCCcCcceeecCCCCeEEEEEE-ec--ccCCCCCEE------EEcC--cHHHHHHHHHHhhhccCCCCE
Confidence 479999999999877654443333345554332 00 000111000 0000 112223334555555557999
Q ss_pred EEEc----------CCCCc---HHHHHHhcCCCeEEEecc
Q 038300 82 LIYD----------LIQPW---APALASSLNIPAVYFLVS 108 (401)
Q Consensus 82 vI~D----------~~~~~---~~~~A~~lgIP~v~~~~~ 108 (401)
||+- .+... ++..|...|||.|.++..
T Consensus 95 ViSGiN~G~N~g~~v~~SGTVgAA~ea~~~GipaIA~S~~ 134 (196)
T PF01975_consen 95 VISGINHGANLGTDVLYSGTVGAAMEAALRGIPAIAVSLD 134 (196)
T ss_dssp EEEEEEES---GGGGGG-HHHHHHHHHHHTTSEEEEEEEE
T ss_pred EEECCCCCccCCcCcccccHHHHHHHHHHcCCCeEEEecc
Confidence 9974 22222 233445679999999875
No 152
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=64.86 E-value=34 Score=36.00 Aligned_cols=32 Identities=25% Similarity=0.246 Sum_probs=23.2
Q ss_pred cCCCEEEEcCCC--CcHHHHHHhcCCCeEEEecc
Q 038300 77 LSPDLLIYDLIQ--PWAPALASSLNIPAVYFLVS 108 (401)
Q Consensus 77 ~~pD~vI~D~~~--~~~~~~A~~lgIP~v~~~~~ 108 (401)
.+||+|++.+.. ..|..+++++|||.+.+..+
T Consensus 384 ~~pDlIHahy~d~glva~lla~~lgVP~v~t~Hs 417 (784)
T TIGR02470 384 GKPDLIIGNYSDGNLVASLLARKLGVTQCTIAHA 417 (784)
T ss_pred CCCCEEEECCCchHHHHHHHHHhcCCCEEEECCc
Confidence 379999987532 23567889999998876543
No 153
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=64.38 E-value=20 Score=37.58 Aligned_cols=107 Identities=15% Similarity=0.090 Sum_probs=60.4
Q ss_pred EcccCchh---hhcccCCcceEEec---CCch-hHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCH
Q 038300 279 IEGWAPQM---KILGHPSIGGFVSH---CGWS-SVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQR 351 (401)
Q Consensus 279 ~~~~~p~~---~~l~~~~~~~~i~h---gG~~-s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~ 351 (401)
+.+++++. .+++.+++ |+.- -|+| .+.|++++|+|-..+|+..+----+. +..-|+.+ ...+.
T Consensus 346 ~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~---~l~~~llv-----~P~d~ 415 (726)
T PRK14501 346 FYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAA---ELAEALLV-----NPNDI 415 (726)
T ss_pred EeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhH---HhCcCeEE-----CCCCH
Confidence 44567765 67788888 7653 2544 77899999775222222111000011 11227777 33578
Q ss_pred HHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc-HHHHHHHHHHH
Q 038300 352 EEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG-EEEIEWVADEL 396 (401)
Q Consensus 352 ~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~ 396 (401)
+++.++|.++++.. .++.+++.+++.+.+++.. ..-++++++.+
T Consensus 416 ~~la~ai~~~l~~~-~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l 460 (726)
T PRK14501 416 EGIAAAIKRALEMP-EEEQRERMQAMQERLRRYDVHKWASDFLDEL 460 (726)
T ss_pred HHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999999998732 2344555556666665544 44444444444
No 154
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=61.96 E-value=17 Score=33.84 Aligned_cols=45 Identities=24% Similarity=0.315 Sum_probs=32.6
Q ss_pred HhhchHHHHHHHhhcCCCEEEEcCCCCcH----------HHHHHhcCCCeEEEec
Q 038300 63 FDMASPSFFNILKNLSPDLLIYDLIQPWA----------PALASSLNIPAVYFLV 107 (401)
Q Consensus 63 ~~~~~~~l~~~l~~~~pD~vI~D~~~~~~----------~~~A~~lgIP~v~~~~ 107 (401)
.+.....+.+.+++.+||++|+-+.+-.+ ..+.++++||.|+-..
T Consensus 65 ~eea~~~i~~mv~~~~pD~viaGPaFnagrYG~acg~v~~aV~e~~~IP~vtaM~ 119 (349)
T PF07355_consen 65 KEEALKKILEMVKKLKPDVVIAGPAFNAGRYGVACGEVAKAVQEKLGIPVVTAMY 119 (349)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcCCchHHHHHHHHHHHHHHhhCCCEEEEec
Confidence 33456667788889999999999765542 2345789999987543
No 155
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=60.42 E-value=12 Score=30.42 Aligned_cols=43 Identities=21% Similarity=0.365 Sum_probs=26.4
Q ss_pred hHHHHHHHhhcCCCEEEEc-CCCCcHHHHHHhcCCCeEEEeccch
Q 038300 67 SPSFFNILKNLSPDLLIYD-LIQPWAPALASSLNIPAVYFLVSSA 110 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D-~~~~~~~~~A~~lgIP~v~~~~~~~ 110 (401)
...+.+++++.+||+|-+- ....+...++-. ++|.+.+.....
T Consensus 69 ~~~~~~~i~~~~~DiVh~~~~~~~~~~~~~~~-~~~~v~~~H~~~ 112 (177)
T PF13439_consen 69 MRRLRRLIKKEKPDIVHIHGPPAFWIALLACR-KVPIVYTIHGPY 112 (177)
T ss_dssp HHHHHHHHHHHT-SEEECCTTHCCCHHHHHHH-CSCEEEEE-HHH
T ss_pred HHHHHHHHHHcCCCeEEecccchhHHHHHhcc-CCCEEEEeCCCc
Confidence 3457778888899999544 333333334444 999999887643
No 156
>PRK12342 hypothetical protein; Provisional
Probab=59.62 E-value=16 Score=32.69 Aligned_cols=40 Identities=15% Similarity=0.250 Sum_probs=29.2
Q ss_pred HHHHHHhhcCCCEEEEcCCC------CcHHHHHHhcCCCeEEEecc
Q 038300 69 SFFNILKNLSPDLLIYDLIQ------PWAPALASSLNIPAVYFLVS 108 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~------~~~~~~A~~lgIP~v~~~~~ 108 (401)
.|...+++..||+|++-... .-+..+|+.||+|++++...
T Consensus 100 ~La~~i~~~~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~ 145 (254)
T PRK12342 100 ALAAAIEKIGFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSK 145 (254)
T ss_pred HHHHHHHHhCCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEE
Confidence 35555666679999975322 22789999999999998754
No 157
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=59.31 E-value=15 Score=34.74 Aligned_cols=41 Identities=17% Similarity=0.129 Sum_probs=31.3
Q ss_pred hchHHHHHHHhhcCCCEEEEc--CC-CCcHHHHHHhcCCCeEEE
Q 038300 65 MASPSFFNILKNLSPDLLIYD--LI-QPWAPALASSLNIPAVYF 105 (401)
Q Consensus 65 ~~~~~l~~~l~~~~pD~vI~D--~~-~~~~~~~A~~lgIP~v~~ 105 (401)
.+...+.+++++.+||+|++- .. ..++..+|..+|||++-+
T Consensus 73 ~~~~~l~~~l~~~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~ 116 (365)
T TIGR00236 73 NMLEGLEELLLEEKPDIVLVQGDTTTTLAGALAAFYLQIPVGHV 116 (365)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHhCCCEEEE
Confidence 345678889999999999864 32 245678889999998754
No 158
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=59.06 E-value=18 Score=29.96 Aligned_cols=28 Identities=25% Similarity=0.411 Sum_probs=22.3
Q ss_pred cceEEecCCch------hHHHHHHhCCcEEecCC
Q 038300 294 IGGFVSHCGWS------SVMESMRLGVPIIAMPM 321 (401)
Q Consensus 294 ~~~~i~hgG~~------s~~eal~~GvP~i~~P~ 321 (401)
.+++++|+|-| ++.||...++|+|++.-
T Consensus 61 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 94 (162)
T cd07037 61 PVAVVCTSGTAVANLLPAVVEAYYSGVPLLVLTA 94 (162)
T ss_pred CEEEEECCchHHHHHhHHHHHHHhcCCCEEEEEC
Confidence 44488888854 67899999999999953
No 159
>PLN02846 digalactosyldiacylglycerol synthase
Probab=56.55 E-value=44 Score=32.92 Aligned_cols=41 Identities=5% Similarity=0.184 Sum_probs=27.2
Q ss_pred hHHHHHHHhhcCCCEEE-EcCCCC-c---HHHHHHhcCCCeEEEecc
Q 038300 67 SPSFFNILKNLSPDLLI-YDLIQP-W---APALASSLNIPAVYFLVS 108 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI-~D~~~~-~---~~~~A~~lgIP~v~~~~~ 108 (401)
...+.+.+++.+||+|. .+++.. | |...++++++ +|.++.+
T Consensus 105 ~~~i~~~l~~~~pDVIHv~tP~~LG~~~~g~~~~~k~~~-vV~tyHT 150 (462)
T PLN02846 105 VGDISETIPDEEADIAVLEEPEHLTWYHHGKRWKTKFRL-VIGIVHT 150 (462)
T ss_pred hHHHHHHHHhcCCCEEEEcCchhhhhHHHHHHHHhcCCc-EEEEECC
Confidence 35688889999999986 444433 3 3456667766 7765555
No 160
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=56.25 E-value=20 Score=32.08 Aligned_cols=40 Identities=18% Similarity=0.135 Sum_probs=29.7
Q ss_pred HHHHHHhhcCCCEEEEcCCC------CcHHHHHHhcCCCeEEEecc
Q 038300 69 SFFNILKNLSPDLLIYDLIQ------PWAPALASSLNIPAVYFLVS 108 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~------~~~~~~A~~lgIP~v~~~~~ 108 (401)
.|...+++..||+|++-... .-+..+|+.||+|++++...
T Consensus 103 ~La~ai~~~~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~ 148 (256)
T PRK03359 103 ALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSK 148 (256)
T ss_pred HHHHHHHHhCCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEE
Confidence 35556666689999975322 34678999999999998764
No 161
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=54.60 E-value=1.7e+02 Score=29.08 Aligned_cols=107 Identities=9% Similarity=0.002 Sum_probs=67.9
Q ss_pred eEEcccCchh---hhcccCCcceEEe---cCCchhH-HHHHHhCC----cEEecCCccchhhHHHHHHhhCeeeeeeccC
Q 038300 277 MVIEGWAPQM---KILGHPSIGGFVS---HCGWSSV-MESMRLGV----PIIAMPMHVDQPLNARLVEDVGIGLEVRRNK 345 (401)
Q Consensus 277 ~~~~~~~p~~---~~l~~~~~~~~i~---hgG~~s~-~eal~~Gv----P~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~ 345 (401)
+.+.+.+|+. .++..+++ ++. .-|+|-+ .|.++++. |+|+=-+.+= .+...-|+.+
T Consensus 364 ~~~~~~v~~~el~alYr~ADV--~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGa-------a~~l~~AllV---- 430 (487)
T TIGR02398 364 QFFTRSLPYEEVSAWFAMADV--MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGA-------AVELKGALLT---- 430 (487)
T ss_pred EEEcCCCCHHHHHHHHHhCCE--EEECccccccCcchhhHHhhhcCCCCCEEEeccccc-------hhhcCCCEEE----
Confidence 3455677765 56777888 554 3488855 49998877 5444433321 1333446777
Q ss_pred CCCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc-HHHHHHHHHHHHh
Q 038300 346 CGRIQREEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG-EEEIEWVADELIH 398 (401)
Q Consensus 346 ~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~~~ 398 (401)
...+.++++++|.+.|+.+ ..+-+++.+++.+.++... ..=++.+++.+..
T Consensus 431 -NP~d~~~~A~ai~~AL~m~-~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 431 -NPYDPVRMDETIYVALAMP-KAEQQARMREMFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred -CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhhh
Confidence 4468999999999999742 3345667777777776655 4445666666543
No 162
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=54.20 E-value=48 Score=31.01 Aligned_cols=82 Identities=11% Similarity=0.160 Sum_probs=62.8
Q ss_pred CceE-EcccCchh---hhcccCCcceEEec--CCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCC
Q 038300 275 RAMV-IEGWAPQM---KILGHPSIGGFVSH--CGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGR 348 (401)
Q Consensus 275 ~~~~-~~~~~p~~---~~l~~~~~~~~i~h--gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~ 348 (401)
.++. +.+++|-. ++|+.++++-|.+. =|.|+++-.+..|+|+++-- +..--+.+.+.|+-+.. ..+.
T Consensus 245 ~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~~----~np~~~~l~~~~ipVlf---~~d~ 317 (360)
T PF07429_consen 245 ENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLSR----DNPFWQDLKEQGIPVLF---YGDE 317 (360)
T ss_pred cceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEec----CChHHHHHHhCCCeEEe---cccc
Confidence 3554 45688754 89999999777765 58999999999999998643 33344556677888877 5688
Q ss_pred CCHHHHHHHHHHHhc
Q 038300 349 IQREEMARVIKEVVM 363 (401)
Q Consensus 349 ~~~~~l~~~i~~~l~ 363 (401)
++...|+++=+++..
T Consensus 318 L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 318 LDEALVREAQRQLAN 332 (360)
T ss_pred CCHHHHHHHHHHHhh
Confidence 999999999888775
No 163
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=54.06 E-value=43 Score=30.26 Aligned_cols=83 Identities=18% Similarity=0.236 Sum_probs=48.0
Q ss_pred CCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceE-Eccc--Cch-hhhcccCCcceEEecCC
Q 038300 227 LSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMV-IEGW--APQ-MKILGHPSIGGFVSHCG 302 (401)
Q Consensus 227 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~p~-~~~l~~~~~~~~i~hgG 302 (401)
.+.+.+.++++.|.+.++++++..+++. ...-..+.+.....++. +.+- +.+ ..+++++++ +|+.-.
T Consensus 137 w~~~~~~~l~~~l~~~~~~ivl~g~~~e-------~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l--~I~~Ds 207 (279)
T cd03789 137 WPAERFAALADRLLARGARVVLTGGPAE-------RELAEEIAAALGGPRVVNLAGKTSLRELAALLARADL--VVTNDS 207 (279)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEechhh-------HHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCE--EEeeCC
Confidence 3456777888888766888876533210 00111122221111221 1221 233 388889999 999743
Q ss_pred chhHHHHHHhCCcEEec
Q 038300 303 WSSVMESMRLGVPIIAM 319 (401)
Q Consensus 303 ~~s~~eal~~GvP~i~~ 319 (401)
|.+.=|.+.|+|+|++
T Consensus 208 -g~~HlA~a~~~p~i~l 223 (279)
T cd03789 208 -GPMHLAAALGTPTVAL 223 (279)
T ss_pred -HHHHHHHHcCCCEEEE
Confidence 6677778999999887
No 164
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=52.50 E-value=41 Score=27.78 Aligned_cols=29 Identities=17% Similarity=0.334 Sum_probs=23.3
Q ss_pred CcceEEecCCch------hHHHHHHhCCcEEecCC
Q 038300 293 SIGGFVSHCGWS------SVMESMRLGVPIIAMPM 321 (401)
Q Consensus 293 ~~~~~i~hgG~~------s~~eal~~GvP~i~~P~ 321 (401)
..++.++|+|-| ++.+|...++|+|++.-
T Consensus 63 ~~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~g 97 (164)
T cd07039 63 KLGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIAG 97 (164)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEec
Confidence 345588998844 78899999999999963
No 165
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=52.28 E-value=30 Score=33.14 Aligned_cols=44 Identities=20% Similarity=0.301 Sum_probs=32.2
Q ss_pred HhhchHHHHHHHhhcCCCEEEEcCCCCcH----------HHHHHhcCCCeEEEe
Q 038300 63 FDMASPSFFNILKNLSPDLLIYDLIQPWA----------PALASSLNIPAVYFL 106 (401)
Q Consensus 63 ~~~~~~~l~~~l~~~~pD~vI~D~~~~~~----------~~~A~~lgIP~v~~~ 106 (401)
.+.....+.+.+++.+||++|+-+.|-.+ ..+.+++|||.++-.
T Consensus 61 ~eea~~~i~~mv~k~~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vtaM 114 (431)
T TIGR01917 61 LEEAKAKVLEMIKGANPDIFIAGPAFNAGRYGMAAGAITKAVQDELGIKAFTAM 114 (431)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEEe
Confidence 33345677888889999999999765542 234478999998865
No 166
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=52.27 E-value=31 Score=33.12 Aligned_cols=44 Identities=25% Similarity=0.361 Sum_probs=32.2
Q ss_pred hhchHHHHHHHhhcCCCEEEEcCCCCcH----------HHHHHhcCCCeEEEec
Q 038300 64 DMASPSFFNILKNLSPDLLIYDLIQPWA----------PALASSLNIPAVYFLV 107 (401)
Q Consensus 64 ~~~~~~l~~~l~~~~pD~vI~D~~~~~~----------~~~A~~lgIP~v~~~~ 107 (401)
+.....+.+.+++.+||++|+-+.|-.+ ..+.+++|||.++-..
T Consensus 62 eea~~~i~~mv~k~~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vt~My 115 (431)
T TIGR01918 62 EEAVARVLEMLKDKEPDIFIAGPAFNAGRYGVACGEICKVVQDKLNVPAVTSMY 115 (431)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEEec
Confidence 3345667888889999999999765542 2344789999988653
No 167
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=50.18 E-value=81 Score=29.76 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=19.7
Q ss_pred HhhcCCCEEEEcCCCCcHHHHHHhc-CCCeEEEec
Q 038300 74 LKNLSPDLLIYDLIQPWAPALASSL-NIPAVYFLV 107 (401)
Q Consensus 74 l~~~~pD~vI~D~~~~~~~~~A~~l-gIP~v~~~~ 107 (401)
....++|+|+++...... .+.... +.|+|....
T Consensus 90 ~~~~~~Dvi~~~~~~~~~-~~~~~~~~~~~i~~~h 123 (392)
T cd03805 90 LPDEKYDVFIVDQVSACV-PLLKLFSPSKILFYCH 123 (392)
T ss_pred cccCCCCEEEEcCcchHH-HHHHHhcCCcEEEEEe
Confidence 455689999998654333 233333 367776554
No 168
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=50.12 E-value=30 Score=29.00 Aligned_cols=38 Identities=26% Similarity=0.194 Sum_probs=25.0
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCc--HHHHHHhcCCCeEEEe
Q 038300 68 PSFFNILKNLSPDLLIYDLIQPW--APALASSLNIPAVYFL 106 (401)
Q Consensus 68 ~~l~~~l~~~~pD~vI~D~~~~~--~~~~A~~lgIP~v~~~ 106 (401)
+.++.++ ..+||+||....... ....-++.|||++.+.
T Consensus 60 ~n~E~ll-~l~PDlii~~~~~~~~~~~~~l~~~gIpvv~i~ 99 (186)
T cd01141 60 LNVELIV-ALKPDLVILYGGFQAQTILDKLEQLGIPVLYVN 99 (186)
T ss_pred CCHHHHh-ccCCCEEEEecCCCchhHHHHHHHcCCCEEEeC
Confidence 4455554 479999998643222 3344578899998875
No 169
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=49.95 E-value=52 Score=30.11 Aligned_cols=41 Identities=20% Similarity=0.102 Sum_probs=28.9
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEecc
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFLVS 108 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~ 108 (401)
...+.+++++.+||+|.+-....... ++...++|.|.....
T Consensus 76 ~~~~~~~~~~~~~Divh~~~~~~~~~-~~~~~~~~~v~~~h~ 116 (335)
T cd03802 76 LALAERALAAGDFDIVHNHSLHLPLP-FARPLPVPVVTTLHG 116 (335)
T ss_pred HHHHHHHHhcCCCCEEEecCcccchh-hhcccCCCEEEEecC
Confidence 34567777888999998765434333 778889998876554
No 170
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=48.98 E-value=51 Score=29.40 Aligned_cols=86 Identities=14% Similarity=0.125 Sum_probs=0.0
Q ss_pred CeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhcCCCEE
Q 038300 3 NFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNLSPDLL 82 (401)
Q Consensus 3 G~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~v 82 (401)
+++|+++.++..++-+-.+.+....++...+. ...+..-=...+...-.+..++++..||+|
T Consensus 26 ~~dV~VVAP~~~qSg~s~slTl~~Plr~~~~~------------------~~~~av~GTPaDCV~lal~~l~~~~~pDLV 87 (252)
T COG0496 26 GADVTVVAPDREQSGASHSLTLHEPLRVRQVD------------------NGAYAVNGTPADCVILGLNELLKEPRPDLV 87 (252)
T ss_pred CCCEEEEccCCCCcccccccccccCceeeEec------------------cceEEecCChHHHHHHHHHHhccCCCCCEE
Q ss_pred EEcCCCCc-------------HHHHHHhcCCCeEEEe
Q 038300 83 IYDLIQPW-------------APALASSLNIPAVYFL 106 (401)
Q Consensus 83 I~D~~~~~-------------~~~~A~~lgIP~v~~~ 106 (401)
|+-.=... |+.-|..+|||.|.++
T Consensus 88 vSGIN~G~Nlg~dv~ySGTVaaA~Ea~~~GipsIA~S 124 (252)
T COG0496 88 VSGINAGANLGDDVIYSGTVAAAMEAALLGIPAIAIS 124 (252)
T ss_pred EeCccCCCccccceeeeehHHHHHHHHHcCccceeee
No 171
>PLN02929 NADH kinase
Probab=47.95 E-value=2e+02 Score=26.52 Aligned_cols=66 Identities=11% Similarity=0.200 Sum_probs=43.2
Q ss_pred ccCCcceEEecCCchhHHHHHH---hCCcEEecCCcc------chhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHH
Q 038300 290 GHPSIGGFVSHCGWSSVMESMR---LGVPIIAMPMHV------DQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKE 360 (401)
Q Consensus 290 ~~~~~~~~i~hgG~~s~~eal~---~GvP~i~~P~~~------dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~ 360 (401)
..+++ +|+-||=||+..+.. .++|++++=... .++.|.-- +....|..- .++.+++.++|.+
T Consensus 63 ~~~Dl--vi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~-~~r~lGfL~------~~~~~~~~~~L~~ 133 (301)
T PLN02929 63 RDVDL--VVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFD-ARRSTGHLC------AATAEDFEQVLDD 133 (301)
T ss_pred CCCCE--EEEECCcHHHHHHHHHcCCCCcEEEEECCCcccccccccccccc-cccCccccc------cCCHHHHHHHHHH
Confidence 34566 999999999999855 468988876532 12222200 111355433 4678999999999
Q ss_pred HhcC
Q 038300 361 VVME 364 (401)
Q Consensus 361 ~l~~ 364 (401)
++++
T Consensus 134 il~g 137 (301)
T PLN02929 134 VLFG 137 (301)
T ss_pred HHcC
Confidence 9974
No 172
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=47.86 E-value=35 Score=31.67 Aligned_cols=120 Identities=14% Similarity=0.078 Sum_probs=67.7
Q ss_pred CCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcc--cCchh-hhcccCCcceEEecCC
Q 038300 226 FLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEG--WAPQM-KILGHPSIGGFVSHCG 302 (401)
Q Consensus 226 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~-~~l~~~~~~~~i~hgG 302 (401)
..+.+.+.++++.|.+.+.++++..|... + ....+.+.+. ..++.+.+ -+.+. .+++++++ ||+.-
T Consensus 193 ~Wp~e~~a~li~~l~~~~~~ivl~~G~~~-e-----~~~~~~i~~~--~~~~~l~g~~sL~elaali~~a~l--~I~nD- 261 (322)
T PRK10964 193 HWPEAHWRELIGLLAPSGLRIKLPWGAEH-E-----EQRAKRLAEG--FPYVEVLPKLSLEQVARVLAGAKA--VVSVD- 261 (322)
T ss_pred cCCHHHHHHHHHHHHHCCCeEEEeCCCHH-H-----HHHHHHHHcc--CCcceecCCCCHHHHHHHHHhCCE--EEecC-
Confidence 34567788888888766777665434210 0 0011111111 11222222 23444 89999999 99865
Q ss_pred chhHHHHHHhCCcEEecCCccchhh------HHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhc
Q 038300 303 WSSVMESMRLGVPIIAMPMHVDQPL------NARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 303 ~~s~~eal~~GvP~i~~P~~~dQ~~------na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
-|.++=|.+.|+|+|++=-..+... |...+.-. +-. -.++++|++-++++++|+
T Consensus 262 SGp~HlA~A~g~p~valfGpt~p~~~~p~~~~~~~~~~~--~~c-----m~~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 262 TGLSHLTAALDRPNITLYGPTDPGLIGGYGKNQHACRSP--GKS-----MADLSAETVFQKLETLIS 321 (322)
T ss_pred CcHHHHHHHhCCCEEEEECCCCcccccCCCCCceeecCC--Ccc-----cccCCHHHHHHHHHHHhh
Confidence 4788899999999998733222111 11111000 111 246899999999988774
No 173
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This is a domain found N-terminal to the catalytic domain of glutaminyl-tRNA synthetase (6.1.1.18 from EC) in eukaryotes but not in Escherichia coli. This domain is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function [].; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3TL4_X.
Probab=47.07 E-value=18 Score=30.03 Aligned_cols=30 Identities=17% Similarity=0.296 Sum_probs=19.4
Q ss_pred hhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhc
Q 038300 326 PLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 326 ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
.+.+..=++.|+|+.+ |+|+|.++|.++++
T Consensus 102 ~d~~~Fe~~cGVGV~V--------T~E~I~~~V~~~i~ 131 (164)
T PF04558_consen 102 IDVAEFEKACGVGVVV--------TPEQIEAAVEKYIE 131 (164)
T ss_dssp --HHHHHHTTTTT------------HHHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCCeEE--------CHHHHHHHHHHHHH
Confidence 3344444456999988 89999999999996
No 174
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=46.81 E-value=31 Score=31.96 Aligned_cols=57 Identities=21% Similarity=0.221 Sum_probs=38.8
Q ss_pred chhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHH---HHHhhCeeeee
Q 038300 284 PQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNAR---LVEDVGIGLEV 341 (401)
Q Consensus 284 p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~---~~~~~g~g~~l 341 (401)
|....|+.++. .|||-=-.+-++||+..|+|+.++|...-.....+ .+++.|.-..+
T Consensus 221 Py~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L~~~g~~r~~ 280 (311)
T PF06258_consen 221 PYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSLEERGAVRPF 280 (311)
T ss_pred cHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHHHHCCCEEEC
Confidence 45577888876 24444447889999999999999999872233333 44445666555
No 175
>cd01981 Pchlide_reductase_B Pchlide_reductase_B: B protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=46.78 E-value=33 Score=33.46 Aligned_cols=37 Identities=14% Similarity=0.279 Sum_probs=30.3
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEec
Q 038300 68 PSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFLV 107 (401)
Q Consensus 68 ~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~ 107 (401)
..+.+.+++.+||++|.+. ....+|+++|+|++.++.
T Consensus 360 ~e~~~~i~~~~pdliig~~---~~~~~a~~~gip~~~~~~ 396 (430)
T cd01981 360 TEVGDMIARTEPELIFGTQ---MERHIGKRLDIPCAVISA 396 (430)
T ss_pred HHHHHHHHhhCCCEEEecc---hhhHHHHHcCCCEEEEeC
Confidence 4577788888999999886 466789999999988754
No 176
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=46.20 E-value=33 Score=33.45 Aligned_cols=36 Identities=25% Similarity=0.238 Sum_probs=30.2
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEe
Q 038300 68 PSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 68 ~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~ 106 (401)
..+.+++++.+||++|.+.. +..+|+++|||++.+.
T Consensus 362 ~e~~~~l~~~~~dliiG~s~---~~~~a~~~~ip~~~~~ 397 (429)
T cd03466 362 FDIESYAKELKIDVLIGNSY---GRRIAEKLGIPLIRIG 397 (429)
T ss_pred HHHHHHHHhcCCCEEEECch---hHHHHHHcCCCEEEec
Confidence 56788888889999998854 6799999999998664
No 177
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=45.97 E-value=2.2e+02 Score=26.22 Aligned_cols=53 Identities=19% Similarity=0.292 Sum_probs=39.1
Q ss_pred cCCcceEEecCCchhHHHHHH----hCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcC
Q 038300 291 HPSIGGFVSHCGWSSVMESMR----LGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVME 364 (401)
Q Consensus 291 ~~~~~~~i~hgG~~s~~eal~----~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~ 364 (401)
.+++ +|+=||=||+.+++. .++|++++... ..|.. ..++.+++.++|.+++++
T Consensus 62 ~~d~--vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G-------------~lGFl------~~~~~~~~~~~l~~~~~g 118 (295)
T PRK01231 62 VCDL--VIVVGGDGSLLGAARALARHNVPVLGINRG-------------RLGFL------TDIRPDELEFKLAEVLDG 118 (295)
T ss_pred CCCE--EEEEeCcHHHHHHHHHhcCCCCCEEEEeCC-------------ccccc------ccCCHHHHHHHHHHHHcC
Confidence 4566 999999999999975 36788887752 23322 346789999999998863
No 178
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=45.64 E-value=29 Score=31.30 Aligned_cols=42 Identities=17% Similarity=0.279 Sum_probs=33.2
Q ss_pred eEEcccCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCC
Q 038300 277 MVIEGWAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPM 321 (401)
Q Consensus 277 ~~~~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~ 321 (401)
+.+.+-++-.++|.+++. +||-.+ ..-.||+.+|+|++++..
T Consensus 185 ~~~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 185 VIIDDDVNLYELLEQSDA--VVTINS-TVGLEALLHGKPVIVFGR 226 (269)
T ss_pred EEECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHcCCceEEecC
Confidence 334455666799999998 888765 477999999999999774
No 179
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=45.14 E-value=51 Score=30.18 Aligned_cols=62 Identities=18% Similarity=0.358 Sum_probs=47.4
Q ss_pred hhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcc
Q 038300 287 KILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMERE 366 (401)
Q Consensus 287 ~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~ 366 (401)
..++|.++=.+.--||+||+...+.+ +...+++++|...++.-|.
T Consensus 96 SYFK~sDLWIVMEYCGAGSiSDI~R~--------------------------------R~K~L~E~EIs~iL~~TLK--- 140 (502)
T KOG0574|consen 96 SYFKHSDLWIVMEYCGAGSISDIMRA--------------------------------RRKPLSEQEISAVLRDTLK--- 140 (502)
T ss_pred hhccCCceEeehhhcCCCcHHHHHHH--------------------------------hcCCccHHHHHHHHHHHHh---
Confidence 44566666557778999999998733 4577899999999999887
Q ss_pred cHHHHHHHHHHHHHHHh
Q 038300 367 GEKIKRKTREMGEKIKE 383 (401)
Q Consensus 367 ~~~~~~~a~~~~~~~~~ 383 (401)
+-.|..-.+++..-+++
T Consensus 141 GL~YLH~~~KIHRDIKA 157 (502)
T KOG0574|consen 141 GLQYLHDLKKIHRDIKA 157 (502)
T ss_pred HHHHHHHHHHHHhhccc
Confidence 67787777777766655
No 180
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=43.38 E-value=45 Score=26.96 Aligned_cols=28 Identities=11% Similarity=0.239 Sum_probs=22.2
Q ss_pred cceEEecCC------chhHHHHHHhCCcEEecCC
Q 038300 294 IGGFVSHCG------WSSVMESMRLGVPIIAMPM 321 (401)
Q Consensus 294 ~~~~i~hgG------~~s~~eal~~GvP~i~~P~ 321 (401)
.+++++|+| .+.+.+|...++|+|++.-
T Consensus 60 ~~v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 60 PGVVLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred CEEEEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 444888876 4478899999999999964
No 181
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=43.29 E-value=91 Score=28.79 Aligned_cols=77 Identities=13% Similarity=0.276 Sum_probs=55.1
Q ss_pred EcccCch---hhhcccCCcceEEec--CCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHH
Q 038300 279 IEGWAPQ---MKILGHPSIGGFVSH--CGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREE 353 (401)
Q Consensus 279 ~~~~~p~---~~~l~~~~~~~~i~h--gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~ 353 (401)
+.+++|- .++|+.+|++-|+++ =|.|+++-.+..|+|+++--- -+.+ .-+.+.|+-|.. +.+.++...
T Consensus 211 L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r~---n~fw-qdl~e~gv~Vlf---~~d~L~~~~ 283 (322)
T PRK02797 211 LTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSRD---NPFW-QDLTEQGLPVLF---TGDDLDEDI 283 (322)
T ss_pred hhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEecC---CchH-HHHHhCCCeEEe---cCCcccHHH
Confidence 3556664 489999999888876 479999999999999997542 1112 224566777766 556788888
Q ss_pred HHHHHHHHh
Q 038300 354 MARVIKEVV 362 (401)
Q Consensus 354 l~~~i~~~l 362 (401)
++++=+++.
T Consensus 284 v~e~~rql~ 292 (322)
T PRK02797 284 VREAQRQLA 292 (322)
T ss_pred HHHHHHHHH
Confidence 877755544
No 182
>cd01965 Nitrogenase_MoFe_beta_like Nitrogenase_MoFe_beta_like: Nitrogenase MoFe protein, beta subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. This group contains the beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (Fe
Probab=43.24 E-value=40 Score=32.86 Aligned_cols=37 Identities=30% Similarity=0.188 Sum_probs=30.2
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEe
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~ 106 (401)
...+.+.+++.+||+||.+.. ...+|+++|+|++.+.
T Consensus 360 ~~el~~~i~~~~pdliig~~~---~~~~a~~~~ip~i~~~ 396 (428)
T cd01965 360 LWDLESLAKEEPVDLLIGNSH---GRYLARDLGIPLVRVG 396 (428)
T ss_pred HHHHHHHhhccCCCEEEECch---hHHHHHhcCCCEEEec
Confidence 356777788889999999964 6799999999998664
No 183
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=43.22 E-value=40 Score=29.78 Aligned_cols=32 Identities=31% Similarity=0.413 Sum_probs=23.2
Q ss_pred CCEEE-EcCCCC-cHHHHHHhcCCCeEEEeccch
Q 038300 79 PDLLI-YDLIQP-WAPALASSLNIPAVYFLVSSA 110 (401)
Q Consensus 79 pD~vI-~D~~~~-~~~~~A~~lgIP~v~~~~~~~ 110 (401)
||+++ +|+-.- -+..-|.++|||+|.+.-+.+
T Consensus 157 Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn~ 190 (252)
T COG0052 157 PDVLFVIDPRKEKIAVKEANKLGIPVVALVDTNC 190 (252)
T ss_pred CCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCCC
Confidence 99755 776432 345678999999999977643
No 184
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=43.18 E-value=34 Score=32.11 Aligned_cols=41 Identities=22% Similarity=0.071 Sum_probs=28.7
Q ss_pred chHHHHHHHhhcCCCEEEEcCC---CCcHHHHHHhcCCCeEEEe
Q 038300 66 ASPSFFNILKNLSPDLLIYDLI---QPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 66 ~~~~l~~~l~~~~pD~vI~D~~---~~~~~~~A~~lgIP~v~~~ 106 (401)
+...+.+.+++.+||+|++-.. ..++..+|..+|||++.+.
T Consensus 76 ~~~~l~~~l~~~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~ 119 (363)
T cd03786 76 LLIGLEAVLLEEKPDLVLVLGDTNETLAAALAAFKLGIPVAHVE 119 (363)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEe
Confidence 3456777788889999886522 2335677888999988543
No 185
>CHL00076 chlB photochlorophyllide reductase subunit B
Probab=43.00 E-value=37 Score=33.95 Aligned_cols=37 Identities=11% Similarity=0.207 Sum_probs=30.5
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEe
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~ 106 (401)
...+++.+++.+||+||.+. +...+|+++|||++.++
T Consensus 363 ~~ei~~~I~~~~pdliiGs~---~er~ia~~lgiP~~~is 399 (513)
T CHL00076 363 HTEVGDMIARVEPSAIFGTQ---MERHIGKRLDIPCGVIS 399 (513)
T ss_pred HHHHHHHHHhcCCCEEEECc---hhhHHHHHhCCCEEEee
Confidence 34567888888999999885 57778999999998876
No 186
>PRK02910 light-independent protochlorophyllide reductase subunit B; Provisional
Probab=42.90 E-value=40 Score=33.81 Aligned_cols=36 Identities=17% Similarity=0.223 Sum_probs=29.8
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEe
Q 038300 68 PSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 68 ~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~ 106 (401)
..+.+.+++.+||+||.+. ....+|+++|||++.++
T Consensus 352 ~el~~~i~~~~PdliiG~~---~er~~a~~lgiP~~~i~ 387 (519)
T PRK02910 352 LEVEDAIAEAAPELVLGTQ---MERHSAKRLGIPCAVIS 387 (519)
T ss_pred HHHHHHHHhcCCCEEEEcc---hHHHHHHHcCCCEEEec
Confidence 4677788888999999775 47789999999998765
No 187
>PRK09219 xanthine phosphoribosyltransferase; Validated
Probab=42.35 E-value=45 Score=28.37 Aligned_cols=43 Identities=16% Similarity=0.104 Sum_probs=30.9
Q ss_pred chHHHHHHHhhcCCCEEEE-c-CCCCcHHHHHHhcCCCeEEEecc
Q 038300 66 ASPSFFNILKNLSPDLLIY-D-LIQPWAPALASSLNIPAVYFLVS 108 (401)
Q Consensus 66 ~~~~l~~~l~~~~pD~vI~-D-~~~~~~~~~A~~lgIP~v~~~~~ 108 (401)
+...+.+.+++.++|+|+. + --++.+..+|..+|+|++.....
T Consensus 38 i~~~la~~~~~~~~D~Ivg~e~~GiplA~~lA~~Lg~p~v~vRK~ 82 (189)
T PRK09219 38 IGKEFARRFKDEGITKILTIEASGIAPAVMAALALGVPVVFAKKK 82 (189)
T ss_pred HHHHHHHHhccCCCCEEEEEccccHHHHHHHHHHHCCCEEEEEEC
Confidence 3444555556668999983 3 34477888999999999988653
No 188
>TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit. This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis.
Probab=41.34 E-value=43 Score=33.53 Aligned_cols=37 Identities=19% Similarity=0.265 Sum_probs=30.4
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEec
Q 038300 68 PSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFLV 107 (401)
Q Consensus 68 ~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~ 107 (401)
..+++.+++.+||+||.+. ....+|+++|||++.++.
T Consensus 354 ~ei~~~i~~~~pdliiG~~---~er~~a~~lgip~~~i~~ 390 (511)
T TIGR01278 354 QEVADAIAALEPELVLGTQ---MERHSAKRLDIPCGVISA 390 (511)
T ss_pred HHHHHHHHhcCCCEEEECh---HHHHHHHHcCCCEEEecC
Confidence 3677778888999999885 577899999999987654
No 189
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=41.32 E-value=74 Score=29.40 Aligned_cols=54 Identities=15% Similarity=0.344 Sum_probs=39.9
Q ss_pred ccCCcceEEecCCchhHHHHHHh----CCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcC
Q 038300 290 GHPSIGGFVSHCGWSSVMESMRL----GVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVME 364 (401)
Q Consensus 290 ~~~~~~~~i~hgG~~s~~eal~~----GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~ 364 (401)
..+++ +|+=||=||+..++.. ++|++++.... .|... ++..+++.+++.+++.+
T Consensus 71 ~~~D~--vi~lGGDGT~L~aar~~~~~~~PilGIN~G~-------------lGFL~------~~~~~~~~~~l~~i~~g 128 (306)
T PRK03372 71 DGCEL--VLVLGGDGTILRAAELARAADVPVLGVNLGH-------------VGFLA------EAEAEDLDEAVERVVDR 128 (306)
T ss_pred cCCCE--EEEEcCCHHHHHHHHHhccCCCcEEEEecCC-------------Cceec------cCCHHHHHHHHHHHHcC
Confidence 44666 9999999999998764 78998887521 34333 45678888888888873
No 190
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=40.98 E-value=64 Score=26.23 Aligned_cols=69 Identities=12% Similarity=0.158 Sum_probs=47.7
Q ss_pred cCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc---HHHHHHHHHH
Q 038300 319 MPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG---EEEIEWVADE 395 (401)
Q Consensus 319 ~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~---~~~~~~~v~~ 395 (401)
.|....+-.+|+.+.+.--++ ..-..|.|.+.+.+|+.+ ++.-+-.+.++++.+.+.| ...+.+++-.
T Consensus 78 yPWt~~~L~aa~el~ee~eeL-------s~deke~~~~sl~dL~~d--~PkT~vA~~rfKk~~~K~g~~v~~~~~dIlVd 148 (158)
T PF10083_consen 78 YPWTENALEAANELIEEDEEL-------SPDEKEQFKESLPDLTKD--TPKTKVAATRFKKILSKAGSIVGDAIRDILVD 148 (158)
T ss_pred CchHHHHHHHHHHHHHHhhcC-------CHHHHHHHHhhhHHHhhc--CCccHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 566667777888887743332 223567899999999975 6777888888988888855 4455555544
Q ss_pred H
Q 038300 396 L 396 (401)
Q Consensus 396 ~ 396 (401)
+
T Consensus 149 v 149 (158)
T PF10083_consen 149 V 149 (158)
T ss_pred H
Confidence 3
No 191
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=40.83 E-value=74 Score=29.77 Aligned_cols=86 Identities=13% Similarity=0.275 Sum_probs=50.4
Q ss_pred CCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceE-Ecc--cCchh-hhcccCCcceEEecC
Q 038300 226 FLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMV-IEG--WAPQM-KILGHPSIGGFVSHC 301 (401)
Q Consensus 226 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~p~~-~~l~~~~~~~~i~hg 301 (401)
..+.+.+.++++.|...+.++++.-++...+ ..+-..+.+.....+++ +.+ -+.+. .+++++++ ||+.
T Consensus 196 ~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e-----~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a~l--~Vs~- 267 (344)
T TIGR02201 196 CWDNDRFSALIDALHARGYEVVLTSGPDKDE-----LAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDHARL--FIGV- 267 (344)
T ss_pred CCCHHHHHHHHHHHHhCCCeEEEecCCCHHH-----HHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHhCCE--EEec-
Confidence 3445677788888876678876653321000 00111121111111221 122 23444 89999999 9986
Q ss_pred CchhHHHHHHhCCcEEec
Q 038300 302 GWSSVMESMRLGVPIIAM 319 (401)
Q Consensus 302 G~~s~~eal~~GvP~i~~ 319 (401)
-.|.+.=|.+.|+|.|++
T Consensus 268 DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 268 DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred CCHHHHHHHHcCCCEEEE
Confidence 568899999999999986
No 192
>PRK00039 ruvC Holliday junction resolvase; Reviewed
Probab=40.76 E-value=69 Score=26.54 Aligned_cols=48 Identities=10% Similarity=0.157 Sum_probs=32.2
Q ss_pred HHHhhchHHHHHHHhhcCCCEEEEc-CCCCc------------H--HHHHHhcCCCeEEEecc
Q 038300 61 EAFDMASPSFFNILKNLSPDLLIYD-LIQPW------------A--PALASSLNIPAVYFLVS 108 (401)
Q Consensus 61 ~~~~~~~~~l~~~l~~~~pD~vI~D-~~~~~------------~--~~~A~~lgIP~v~~~~~ 108 (401)
.....+...+.+++++.+||.++.+ .|+.- | ..++.+.|||..-+.|.
T Consensus 44 ~Rl~~I~~~l~~~i~~~~Pd~vaiE~~f~~~n~~sa~~l~~arGvi~la~~~~~ipv~ey~P~ 106 (164)
T PRK00039 44 ERLKQIYDGLSELIDEYQPDEVAIEEVFFNKNPQSALKLGQARGVAILAAAQRGLPVAEYTPL 106 (164)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEehhhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHH
Confidence 3344456789999999999999887 33331 1 12456778888777554
No 193
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=40.68 E-value=23 Score=29.67 Aligned_cols=32 Identities=13% Similarity=0.347 Sum_probs=20.8
Q ss_pred cCCcceEEecCCchhHHHHHHhCCcEEecCCcc
Q 038300 291 HPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHV 323 (401)
Q Consensus 291 ~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~ 323 (401)
+..+..+||+||...+..... ++|+|-+|..+
T Consensus 32 ~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~ 63 (176)
T PF06506_consen 32 SEGADVIISRGGTAELLRKHV-SIPVVEIPISG 63 (176)
T ss_dssp TTT-SEEEEEHHHHHHHHCC--SS-EEEE---H
T ss_pred hcCCeEEEECCHHHHHHHHhC-CCCEEEECCCH
Confidence 344444999999888888876 99999999853
No 194
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=40.66 E-value=85 Score=28.86 Aligned_cols=54 Identities=22% Similarity=0.259 Sum_probs=39.6
Q ss_pred ccCCcceEEecCCchhHHHHHH----hCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcC
Q 038300 290 GHPSIGGFVSHCGWSSVMESMR----LGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVME 364 (401)
Q Consensus 290 ~~~~~~~~i~hgG~~s~~eal~----~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~ 364 (401)
..+++ +|+=||=||+..++. .++|++++-... .|..- +++.+++.+++++++++
T Consensus 67 ~~~D~--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G~-------------lGFL~------~~~~~~~~~~l~~i~~g 124 (296)
T PRK04539 67 QYCDL--VAVLGGDGTFLSVAREIAPRAVPIIGINQGH-------------LGFLT------QIPREYMTDKLLPVLEG 124 (296)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhcccCCCEEEEecCC-------------CeEee------ccCHHHHHHHHHHHHcC
Confidence 35666 999999999999975 378988876421 44433 36778888888888863
No 195
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=40.63 E-value=34 Score=21.33 Aligned_cols=27 Identities=19% Similarity=0.407 Sum_probs=19.1
Q ss_pred CHHHHHHHHHHHhcCcccHHHHHHHHHHH
Q 038300 350 QREEMARVIKEVVMEREGEKIKRKTREMG 378 (401)
Q Consensus 350 ~~~~l~~~i~~~l~~~~~~~~~~~a~~~~ 378 (401)
++|+|.+||..+.++ .-++++.|++.+
T Consensus 1 tee~l~~Ai~~v~~g--~~S~r~AA~~yg 27 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNG--KMSIRKAAKKYG 27 (45)
T ss_dssp -HHHHHHHHHHHHTT--SS-HHHHHHHHT
T ss_pred CHHHHHHHHHHHHhC--CCCHHHHHHHHC
Confidence 578999999999973 267777776653
No 196
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=39.92 E-value=75 Score=28.70 Aligned_cols=52 Identities=13% Similarity=0.247 Sum_probs=36.2
Q ss_pred cCCcceEEecCCchhHHHHHH------hCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhc
Q 038300 291 HPSIGGFVSHCGWSSVMESMR------LGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 291 ~~~~~~~i~hgG~~s~~eal~------~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
.+++ +|+-||=||+..++. .++|++++-.. ..|.. .+++.+++.++++++++
T Consensus 35 ~~Dl--vi~iGGDGT~L~a~~~~~~~~~~iPilGIN~G-------------~lGFL------~~~~~~~~~~~l~~i~~ 92 (265)
T PRK04885 35 NPDI--VISVGGDGTLLSAFHRYENQLDKVRFVGVHTG-------------HLGFY------TDWRPFEVDKLVIALAK 92 (265)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcccCCCCeEEEEeCC-------------Cceec------ccCCHHHHHHHHHHHHc
Confidence 3555 999999999999986 48898887641 12322 23456777777777775
No 197
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=39.00 E-value=48 Score=33.17 Aligned_cols=37 Identities=11% Similarity=0.080 Sum_probs=30.3
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEe
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~ 106 (401)
...+++++...+||++|... .+..+|+++|||.+-+.
T Consensus 426 l~~l~~~l~~~~~DlliG~s---~~k~~a~~~giPlir~g 462 (515)
T TIGR01286 426 LWHLRSLVFTEPVDFLIGNS---YGKYIQRDTLVPLIRIG 462 (515)
T ss_pred HHHHHHHHhhcCCCEEEECc---hHHHHHHHcCCCEEEec
Confidence 44677788888999999774 47899999999998764
No 198
>cd01976 Nitrogenase_MoFe_alpha Nitrogenase_MoFe_alpha_II: Nitrogenase MoFe protein, beta subunit. A group of proteins similar to the alpha subunit of the MoFe protein of the molybdenum (Mo-) nitrogenase. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Mo-nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=38.67 E-value=39 Score=32.87 Aligned_cols=37 Identities=19% Similarity=0.230 Sum_probs=30.3
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEe
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~ 106 (401)
...+.+.+++.+||++|.... +..+|+++|||++.+.
T Consensus 358 ~~e~~~~i~~~~pDliig~~~---~~~~a~k~giP~~~~~ 394 (421)
T cd01976 358 HYELEEFVKRLKPDLIGSGIK---EKYVFQKMGIPFRQMH 394 (421)
T ss_pred HHHHHHHHHHhCCCEEEecCc---chhhhhhcCCCeEeCC
Confidence 446778888889999998864 7789999999997654
No 199
>smart00096 UTG Uteroglobin.
Probab=38.36 E-value=1.3e+02 Score=20.79 Aligned_cols=46 Identities=9% Similarity=0.106 Sum_probs=35.8
Q ss_pred CCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc---HHHHHHHHHHHH
Q 038300 349 IQREEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG---EEEIEWVADELI 397 (401)
Q Consensus 349 ~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~---~~~~~~~v~~~~ 397 (401)
-|+++.+..+...-. ++.+.+++.++++..-... +..+.++++.|.
T Consensus 16 gt~~~Y~~~l~~y~~---~~~~~ea~~~lK~cvD~L~~~~k~~i~~ll~kI~ 64 (69)
T smart00096 16 GTPSSYEASLKQFKP---DPDMLEAGRQLKKLVDTLPQETRENILKLTEKIY 64 (69)
T ss_pred CCHHHHHHHHHhcCC---CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 367778888887666 7999999999998876633 667888888774
No 200
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=38.26 E-value=89 Score=28.66 Aligned_cols=53 Identities=19% Similarity=0.333 Sum_probs=37.5
Q ss_pred ccCCcceEEecCCchhHHHHHHh----CCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhc
Q 038300 290 GHPSIGGFVSHCGWSSVMESMRL----GVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 290 ~~~~~~~~i~hgG~~s~~eal~~----GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
..+++ +|+-||=||+.+++.. ++|++.+-.. ..|... +++.+++.++|.++++
T Consensus 62 ~~~d~--vi~~GGDGt~l~~~~~~~~~~~pilGIn~G-------------~lGFL~------~~~~~~~~~~l~~~~~ 118 (291)
T PRK02155 62 ARADL--AVVLGGDGTMLGIGRQLAPYGVPLIGINHG-------------RLGFIT------DIPLDDMQETLPPMLA 118 (291)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEcCC-------------Cccccc------cCCHHHHHHHHHHHHc
Confidence 34666 9999999999999763 6788877631 123222 4567888888888776
No 201
>PRK07710 acetolactate synthase catalytic subunit; Reviewed
Probab=38.10 E-value=1.2e+02 Score=30.84 Aligned_cols=28 Identities=14% Similarity=0.330 Sum_probs=23.0
Q ss_pred CcceEEecCCch------hHHHHHHhCCcEEecC
Q 038300 293 SIGGFVSHCGWS------SVMESMRLGVPIIAMP 320 (401)
Q Consensus 293 ~~~~~i~hgG~~------s~~eal~~GvP~i~~P 320 (401)
..+++++|.|-| ++.+|...++|+|++-
T Consensus 78 ~~gv~~~t~GPG~~N~~~gl~~A~~~~~Pvl~It 111 (571)
T PRK07710 78 KPGVVIATSGPGATNVVTGLADAMIDSLPLVVFT 111 (571)
T ss_pred CCeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 345589998855 6889999999999995
No 202
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=38.00 E-value=1.8e+02 Score=26.81 Aligned_cols=37 Identities=8% Similarity=0.055 Sum_probs=23.3
Q ss_pred HHHHHhhcCCCEEEEcCCC--CcHHHHHHhcCCCeEEEe
Q 038300 70 FFNILKNLSPDLLIYDLIQ--PWAPALASSLNIPAVYFL 106 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~--~~~~~~A~~lgIP~v~~~ 106 (401)
+..+++..+||+|.+-... .....++..+++|.++++
T Consensus 72 ~~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~ 110 (358)
T cd03812 72 LYKLIKKNKYDIVHVHGSSASGFILLAAKKAGVKVRIAH 110 (358)
T ss_pred HHHHHhcCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEE
Confidence 4456778899999876432 122334556788886654
No 203
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=37.87 E-value=60 Score=31.73 Aligned_cols=37 Identities=27% Similarity=0.259 Sum_probs=29.4
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEe
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~ 106 (401)
...+.+.+++.+||++|... ++..+|+++|||++.+.
T Consensus 366 ~~e~~~~i~~~~pDliiG~s---~~~~~a~~~gip~v~~~ 402 (435)
T cd01974 366 LWHLRSLLFTEPVDLLIGNT---YGKYIARDTDIPLVRFG 402 (435)
T ss_pred HHHHHHHHhhcCCCEEEECc---cHHHHHHHhCCCEEEee
Confidence 34566777788999999774 47899999999998764
No 204
>PLN02859 glutamine-tRNA ligase
Probab=37.83 E-value=76 Score=33.33 Aligned_cols=49 Identities=16% Similarity=0.369 Sum_probs=32.9
Q ss_pred hHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcc----cHHHHHHHHHHHHHHHh
Q 038300 327 LNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMERE----GEKIKRKTREMGEKIKE 383 (401)
Q Consensus 327 ~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~----~~~~~~~a~~~~~~~~~ 383 (401)
+.+..-++.|+|+.+ |+|+|.++|.+++++.. ...|+.|...+-..+++
T Consensus 105 d~~~Fek~CGVGV~V--------T~EqI~~~V~~~i~~~k~~il~~RY~~n~g~ll~~~r~ 157 (788)
T PLN02859 105 DLNKFEEACGVGVVV--------SPEDIEAAVNEVFEENKEKILEQRYRTNVGDLLGQVRK 157 (788)
T ss_pred CHHHHHHhCCCCEEE--------CHHHHHHHHHHHHHhhHHHHHHhcccccHHHHHHHHHh
Confidence 344444556999988 89999999999997321 24566555555555554
No 205
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=37.77 E-value=84 Score=28.74 Aligned_cols=55 Identities=11% Similarity=0.186 Sum_probs=38.3
Q ss_pred cccCCcceEEecCCchhHHHHHH----hCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcC
Q 038300 289 LGHPSIGGFVSHCGWSSVMESMR----LGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVME 364 (401)
Q Consensus 289 l~~~~~~~~i~hgG~~s~~eal~----~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~ 364 (401)
...+++ +|+-||=||+..++. .++|++++-... .|.. .+++.+++.+++++++.+
T Consensus 62 ~~~~Dl--vi~iGGDGT~L~aa~~~~~~~~PilGIN~G~-------------lGFL------t~~~~~~~~~~l~~i~~g 120 (287)
T PRK14077 62 FKISDF--LISLGGDGTLISLCRKAAEYDKFVLGIHAGH-------------LGFL------TDITVDEAEKFFQAFFQG 120 (287)
T ss_pred ccCCCE--EEEECCCHHHHHHHHHhcCCCCcEEEEeCCC-------------cccC------CcCCHHHHHHHHHHHHcC
Confidence 345666 999999999998865 377888775421 3322 245678888888888763
No 206
>TIGR00228 ruvC crossover junction endodeoxyribonuclease RuvC. Endonuclease that resolves Holliday junction intermediates in genetic recombination. The active form of the protein is a dimer. Structure studies reveals that the catalytic center, comprised of four acidic residues, lies at the bottom of a cleft that fits a DNA duplex. The model hits a single Synechocystis PCC6803 protein at a score of 30, below the trusted cutoff, that appears orthologous and may act as authentic RuvC.
Probab=37.63 E-value=82 Score=25.85 Aligned_cols=49 Identities=10% Similarity=0.198 Sum_probs=33.5
Q ss_pred HHHHhhchHHHHHHHhhcCCCEEEEcCCCCc---------------HHHHHHhcCCCeEEEecc
Q 038300 60 KEAFDMASPSFFNILKNLSPDLLIYDLIQPW---------------APALASSLNIPAVYFLVS 108 (401)
Q Consensus 60 ~~~~~~~~~~l~~~l~~~~pD~vI~D~~~~~---------------~~~~A~~lgIP~v~~~~~ 108 (401)
......++..+.+++++.+||.+..+-.++. ...++...|+|..-+.|.
T Consensus 39 ~~RL~~I~~~l~~~i~~y~P~~~aiE~~F~~~N~~sa~~lg~arGvilla~~~~~ipv~Ey~P~ 102 (156)
T TIGR00228 39 PSRLKLIYAGVTEIITQFQPNYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAAR 102 (156)
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeHHhhccCHHHHHHHHHHHHHHHHHHHHcCCCEEEECHH
Confidence 3444557788999999999999888843332 233446667787776654
No 207
>TIGR01285 nifN nitrogenase molybdenum-iron cofactor biosynthesis protein NifN. This protein forms a complex with NifE, and appears as a NifEN in some species. NifEN is a required for producing the molybdenum-iron cofactor of molybdenum-requiring nitrogenases. NifN is closely related to the nitrogenase molybdenum-iron protein beta chain NifK. This model describes most examples of NifN but excludes some cases, such as the putative NifN of Chlorobium tepidum, for which a separate model may be created.
Probab=37.48 E-value=58 Score=31.80 Aligned_cols=36 Identities=28% Similarity=0.266 Sum_probs=29.3
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEe
Q 038300 68 PSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 68 ~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~ 106 (401)
..+.+.+++.++|+||... .+..+|+++|||++-+.
T Consensus 363 ~~l~~~i~~~~~dliig~s---~~k~~A~~l~ip~ir~g 398 (432)
T TIGR01285 363 EDLEDLACAAGADLLITNS---HGRALAQRLALPLVRAG 398 (432)
T ss_pred HHHHHHHhhcCCCEEEECc---chHHHHHHcCCCEEEec
Confidence 4567788888999999774 57899999999998653
No 208
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=36.62 E-value=2.6e+02 Score=26.25 Aligned_cols=32 Identities=28% Similarity=0.303 Sum_probs=21.9
Q ss_pred hCCcEEecCCccch-----hhHHHHHHhhCe-eeeeec
Q 038300 312 LGVPIIAMPMHVDQ-----PLNARLVEDVGI-GLEVRR 343 (401)
Q Consensus 312 ~GvP~i~~P~~~dQ-----~~na~~~~~~g~-g~~l~~ 343 (401)
++.|+|+-|-+.-- +.-++.....|+ |+.+++
T Consensus 261 ~~lPVi~d~sH~~G~~~~v~~~a~AAvA~GAdGliIE~ 298 (335)
T PRK08673 261 THLPVIVDPSHATGKRDLVEPLALAAVAAGADGLIVEV 298 (335)
T ss_pred cCCCEEEeCCCCCccccchHHHHHHHHHhCCCEEEEEe
Confidence 58999999976422 356666777787 566743
No 209
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=36.56 E-value=1.1e+02 Score=28.69 Aligned_cols=86 Identities=9% Similarity=0.217 Sum_probs=50.2
Q ss_pred CCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceE-Eccc--Cchh-hhcccCCcceEEecC
Q 038300 226 FLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMV-IEGW--APQM-KILGHPSIGGFVSHC 301 (401)
Q Consensus 226 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~p~~-~~l~~~~~~~~i~hg 301 (401)
..+.+.+.++++.|.+.+.++++.-++...+. ..-+.+.+.....+++ +.+- +.+. .+++++++ ||+.=
T Consensus 198 ~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~-----~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a~l--~v~nD 270 (352)
T PRK10422 198 CWDNDKFSAVIDALQARGYEVVLTSGPDKDDL-----ACVNEIAQGCQTPPVTALAGKTTFPELGALIDHAQL--FIGVD 270 (352)
T ss_pred CCCHHHHHHHHHHHHHCCCeEEEEcCCChHHH-----HHHHHHHHhcCCCccccccCCCCHHHHHHHHHhCCE--EEecC
Confidence 34567788888888777888776544321000 0001111111111221 2222 3444 89999999 99854
Q ss_pred CchhHHHHHHhCCcEEec
Q 038300 302 GWSSVMESMRLGVPIIAM 319 (401)
Q Consensus 302 G~~s~~eal~~GvP~i~~ 319 (401)
.|-++=|.+.|+|+|++
T Consensus 271 -SGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 271 -SAPAHIAAAVNTPLICL 287 (352)
T ss_pred -CHHHHHHHHcCCCEEEE
Confidence 57788889999999876
No 210
>cd01147 HemV-2 Metal binding protein HemV-2. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=36.26 E-value=64 Score=28.59 Aligned_cols=40 Identities=25% Similarity=0.272 Sum_probs=24.8
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCc--HHH-HHHhcCCCeEEEecc
Q 038300 68 PSFFNILKNLSPDLLIYDLIQPW--APA-LASSLNIPAVYFLVS 108 (401)
Q Consensus 68 ~~l~~~l~~~~pD~vI~D~~~~~--~~~-~A~~lgIP~v~~~~~ 108 (401)
+.++.+ .+++||+||....... ... +.+.+|||++.+...
T Consensus 65 ~n~E~i-~~l~PDLIi~~~~~~~~~~~~~l~~~~gipvv~~~~~ 107 (262)
T cd01147 65 PNYEKI-AALKPDVVIDVGSDDPTSIADDLQKKTGIPVVVLDGG 107 (262)
T ss_pred CCHHHH-HhcCCCEEEEecCCccchhHHHHHHhhCCCEEEEecC
Confidence 344444 4579999997644332 122 334589999888653
No 211
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=36.08 E-value=95 Score=28.50 Aligned_cols=57 Identities=18% Similarity=0.398 Sum_probs=40.7
Q ss_pred hhcccCCcceEEecCCchhHHHHHHh----CCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHh
Q 038300 287 KILGHPSIGGFVSHCGWSSVMESMRL----GVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVV 362 (401)
Q Consensus 287 ~~l~~~~~~~~i~hgG~~s~~eal~~----GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l 362 (401)
.+...+++ +|+=||=||+..++.. ++|++++-... .|.. .+++.+++.+++++++
T Consensus 60 ~~~~~~dl--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G~-------------lGFL------t~~~~~~~~~~l~~i~ 118 (292)
T PRK01911 60 ELDGSADM--VISIGGDGTFLRTATYVGNSNIPILGINTGR-------------LGFL------ATVSKEEIEETIDELL 118 (292)
T ss_pred hcccCCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEecCC-------------CCcc------cccCHHHHHHHHHHHH
Confidence 33345666 9999999999998873 78888876421 3422 2467788888898888
Q ss_pred cC
Q 038300 363 ME 364 (401)
Q Consensus 363 ~~ 364 (401)
++
T Consensus 119 ~g 120 (292)
T PRK01911 119 NG 120 (292)
T ss_pred cC
Confidence 73
No 212
>PF10820 DUF2543: Protein of unknown function (DUF2543); InterPro: IPR020251 This entry contains proteins with no known function.
Probab=36.04 E-value=1.4e+02 Score=20.60 Aligned_cols=40 Identities=25% Similarity=0.366 Sum_probs=25.5
Q ss_pred HHHHHHHhcCcccHHHHHHHHHHHHHHHhhc--HHHHHHHHHHHHhh
Q 038300 355 ARVIKEVVMEREGEKIKRKTREMGEKIKEKG--EEEIEWVADELIHL 399 (401)
Q Consensus 355 ~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~v~~~~~~ 399 (401)
.-.|.++|+ ++++-+.|++ +++++.| .+.++++...|.++
T Consensus 37 QlLitRLmn---neeIsEeaQ~--EMA~eAgi~~~rID~IA~fLNqW 78 (81)
T PF10820_consen 37 QLLITRLMN---NEEISEEAQQ--EMASEAGIDEQRIDDIANFLNQW 78 (81)
T ss_pred HHHHHHHhc---cHhhhHHHHH--HHHHHcCCcHHHHHHHHHHHHHh
Confidence 345667777 5666665543 4455566 77788887777653
No 213
>PRK15411 rcsA colanic acid capsular biosynthesis activation protein A; Provisional
Probab=35.31 E-value=81 Score=27.13 Aligned_cols=40 Identities=10% Similarity=0.183 Sum_probs=25.7
Q ss_pred HHHHHHhhcCCCEEEEc----CCCCcHHHHHHhc-----CCCeEEEecc
Q 038300 69 SFFNILKNLSPDLLIYD----LIQPWAPALASSL-----NIPAVYFLVS 108 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D----~~~~~~~~~A~~l-----gIP~v~~~~~ 108 (401)
.+.+.+++.+|||||.| .-.+.|..+.+.+ +++.++++..
T Consensus 38 ~~~~~~~~~~pDlvLlDl~~~l~~~~g~~~i~~i~~~~p~~~iivlt~~ 86 (207)
T PRK15411 38 DLAIACDSLRPSVVFINEDCFIHDASNSQRIKQIINQHPNTLFIVFMAI 86 (207)
T ss_pred HHHHHHhccCCCEEEEeCcccCCCCChHHHHHHHHHHCCCCeEEEEECC
Confidence 34445566789999999 3344566666543 4677777654
No 214
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=35.29 E-value=1.1e+02 Score=25.13 Aligned_cols=29 Identities=17% Similarity=0.381 Sum_probs=22.3
Q ss_pred CcceEEecCCc------hhHHHHHHhCCcEEecCC
Q 038300 293 SIGGFVSHCGW------SSVMESMRLGVPIIAMPM 321 (401)
Q Consensus 293 ~~~~~i~hgG~------~s~~eal~~GvP~i~~P~ 321 (401)
..+++++++|- +++.+|...++|+|++.-
T Consensus 59 ~~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 93 (162)
T cd07038 59 GLGALVTTYGVGELSALNGIAGAYAEHVPVVHIVG 93 (162)
T ss_pred CCEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEec
Confidence 34557887774 477889999999999964
No 215
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=34.92 E-value=58 Score=27.63 Aligned_cols=43 Identities=26% Similarity=0.354 Sum_probs=29.4
Q ss_pred HHHHHHHhhcCCC--EEEEc-CCCCcHHHHHHhcCCCeEEEeccch
Q 038300 68 PSFFNILKNLSPD--LLIYD-LIQPWAPALASSLNIPAVYFLVSSA 110 (401)
Q Consensus 68 ~~l~~~l~~~~pD--~vI~D-~~~~~~~~~A~~lgIP~v~~~~~~~ 110 (401)
..+.+++++..++ ++|-. +-..++..+|+++|+|.|.+.|+-.
T Consensus 47 ~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~~~avLiNPav~ 92 (187)
T PF05728_consen 47 AQLEQLIEELKPENVVLIGSSLGGFYATYLAERYGLPAVLINPAVR 92 (187)
T ss_pred HHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhCCCEEEEcCCCC
Confidence 4466777777654 55533 3334456789999999999988643
No 216
>PF01497 Peripla_BP_2: Periplasmic binding protein; InterPro: IPR002491 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). Most bacterial importers employ a periplasmic substrate-binding protein (PBP) that delivers the ligand to the extracellular gate of the TM domains. These proteins bind their substrates selectively and with high affinity, which is thought to ensure the specificity of the transport reaction. Binding proteins in Gram-negative bacteria are present within the periplasm, whereas those in Gram-positive bacteria are tethered to the cell membrane via the acylation of a cysteine residue that is an integral component of a lipoprotein signal sequence. In planta expression of a high-affinity iron-uptake system involving the siderophore chrysobactin in Erwinia chrysanthemi 3937 contributes greatly to invasive growth of this pathogen on its natural host, African violets []. The cobalamin (vitamin B12) and the iron transport systems share many common attributes and probably evolved from the same origin [, ]. The periplasmic-binding domain is composed of two subdomains, each consisting of a central beta-sheet and surrounding alpha-helices, linked by a rigid alpha-helix. The substrate binding site is located in a cleft between the two alpha/beta subdomains [].; GO: 0005488 binding; PDB: 2X4L_A 1N4A_B 1N2Z_B 1N4D_B 4DBL_J 2QI9_F 3EIW_A 3EIX_A 3MWG_A 3MWF_A ....
Probab=34.77 E-value=47 Score=28.87 Aligned_cols=41 Identities=29% Similarity=0.290 Sum_probs=25.9
Q ss_pred HHHHHHHhhcCCCEEEEcCCC--CcHHHHHHhcCCCeEEEeccc
Q 038300 68 PSFFNILKNLSPDLLIYDLIQ--PWAPALASSLNIPAVYFLVSS 109 (401)
Q Consensus 68 ~~l~~~l~~~~pD~vI~D~~~--~~~~~~A~~lgIP~v~~~~~~ 109 (401)
..++. +..++||+||..... .....-....+||++.+....
T Consensus 51 ~~~E~-i~~l~PDlIi~~~~~~~~~~~~~~~~~~ip~~~~~~~~ 93 (238)
T PF01497_consen 51 PNLEA-ILALKPDLIIGSSFYGQSEEIEKLLEAGIPVVVFDSSS 93 (238)
T ss_dssp B-HHH-HHHT--SEEEEETTSSCHHHHHHHHHTTSEEEEESSTT
T ss_pred ccHHH-HHhCCCCEEEEeccccchHHHHHHhcccceEEEeeccc
Confidence 34444 445799999987664 233445567799999987754
No 217
>PRK14478 nitrogenase molybdenum-cofactor biosynthesis protein NifE; Provisional
Probab=34.76 E-value=49 Score=32.76 Aligned_cols=34 Identities=15% Similarity=0.311 Sum_probs=28.0
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEE
Q 038300 68 PSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVY 104 (401)
Q Consensus 68 ~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~ 104 (401)
..+.+.+++.+||++|.. ..+..+|+++|||++.
T Consensus 383 ~e~~~~i~~~~pDliig~---s~~~~~a~k~giP~~~ 416 (475)
T PRK14478 383 RELYKMLKEAKADIMLSG---GRSQFIALKAGMPWLD 416 (475)
T ss_pred HHHHHHHhhcCCCEEEec---CchhhhhhhcCCCEEE
Confidence 456667788899999986 6678999999999984
No 218
>cd01980 Chlide_reductase_Y Chlide_reductase_Y : Y subunit of chlorophyllide (chlide) reductase (BchY). Chlide reductase participates in photosynthetic pigment synthesis playing a role in the conversion of chlorophylls(Chl) into bacteriochlorophylls (BChl). Chlide reductase catalyzes the reduction of the B-ring of the tetrapyrolle. Chlide reductase is a three subunit enzyme (subunits are designated BchX, BchY and BchZ). The similarity between these three subunits and the subunits for nitrogenase suggests that BchX serves as an electron donor for the BchY-BchY catalytic subunits.
Probab=34.57 E-value=64 Score=31.32 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=27.0
Q ss_pred HHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEec
Q 038300 71 FNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFLV 107 (401)
Q Consensus 71 ~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~ 107 (401)
.+.+++.+||++|.. ..+..+|+++|||.+-+..
T Consensus 343 ~~~~~~~~pDl~Ig~---s~~~~~a~~~giP~~r~~~ 376 (416)
T cd01980 343 IAAVEEYRPDLAIGT---TPLVQYAKEKGIPALYYTN 376 (416)
T ss_pred HHHHhhcCCCEEEeC---ChhhHHHHHhCCCEEEecC
Confidence 445567899999977 4578899999999987643
No 219
>PLN02275 transferase, transferring glycosyl groups
Probab=34.40 E-value=3.8e+02 Score=25.24 Aligned_cols=34 Identities=12% Similarity=-0.114 Sum_probs=21.9
Q ss_pred hhcCCCEEEEc-CCCCc----HHHHHHhcCCCeEEEecc
Q 038300 75 KNLSPDLLIYD-LIQPW----APALASSLNIPAVYFLVS 108 (401)
Q Consensus 75 ~~~~pD~vI~D-~~~~~----~~~~A~~lgIP~v~~~~~ 108 (401)
+..+||+|++- +...+ +..++...++|.|..+..
T Consensus 97 ~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~ 135 (371)
T PLN02275 97 KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHN 135 (371)
T ss_pred hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCC
Confidence 45799999874 23222 234556779999887554
No 220
>PLN02293 adenine phosphoribosyltransferase
Probab=34.23 E-value=89 Score=26.50 Aligned_cols=42 Identities=10% Similarity=0.108 Sum_probs=29.7
Q ss_pred hchHHHHHHHhhcCCCEEE-Ec-CCCCcHHHHHHhcCCCeEEEe
Q 038300 65 MASPSFFNILKNLSPDLLI-YD-LIQPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 65 ~~~~~l~~~l~~~~pD~vI-~D-~~~~~~~~~A~~lgIP~v~~~ 106 (401)
.+.+.+.+.+++.++|+|+ .+ --++.+..+|..+|+|++...
T Consensus 49 ~~~~~l~~~~~~~~~d~Ivg~e~~Gi~lA~~lA~~Lg~p~v~~r 92 (187)
T PLN02293 49 DTIDLFVERYRDMGISVVAGIEARGFIFGPPIALAIGAKFVPLR 92 (187)
T ss_pred HHHHHHHHHHhhcCCCEEEEeCCCchHHHHHHHHHHCCCEEEEE
Confidence 3455566666666889988 44 344677889999999987654
No 221
>cd01143 YvrC Periplasmic binding protein YvrC. These proteins are predicted to function as initial receptors in ABC transport of metal ions in eubacteria and archaea. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.
Probab=34.11 E-value=75 Score=26.59 Aligned_cols=39 Identities=26% Similarity=0.261 Sum_probs=24.9
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCc-HHHHHHhcCCCeEEEec
Q 038300 68 PSFFNILKNLSPDLLIYDLIQPW-APALASSLNIPAVYFLV 107 (401)
Q Consensus 68 ~~l~~~l~~~~pD~vI~D~~~~~-~~~~A~~lgIP~v~~~~ 107 (401)
+.++.+ -+.+||+||....... .....++.|||++.+..
T Consensus 51 ~n~E~l-~~l~PDlii~~~~~~~~~~~~l~~~gi~v~~~~~ 90 (195)
T cd01143 51 PNVEKI-VALKPDLVIVSSSSLAELLEKLKDAGIPVVVLPA 90 (195)
T ss_pred CCHHHH-hccCCCEEEEcCCcCHHHHHHHHHcCCcEEEeCC
Confidence 445554 4579999998643222 23445778999887754
No 222
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=34.08 E-value=2.5e+02 Score=22.84 Aligned_cols=127 Identities=19% Similarity=0.258 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhhhcccCCcceEEecCCch----
Q 038300 229 KEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMKILGHPSIGGFVSHCGWS---- 304 (401)
Q Consensus 229 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~i~hgG~~---- 304 (401)
.+..+++...|+..|+.+-..+-. ....|+.+. .|+...+- ..+++ ||.=.|..
T Consensus 13 ~~~~~~a~~~L~~~gi~~~~~V~s--------aHR~p~~l~-----------~~~~~~~~-~~~~v--iIa~AG~~a~Lp 70 (150)
T PF00731_consen 13 LPIAEEAAKTLEEFGIPYEVRVAS--------AHRTPERLL-----------EFVKEYEA-RGADV--IIAVAGMSAALP 70 (150)
T ss_dssp HHHHHHHHHHHHHTT-EEEEEE----------TTTSHHHHH-----------HHHHHTTT-TTESE--EEEEEESS--HH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEe--------ccCCHHHHH-----------HHHHHhcc-CCCEE--EEEECCCcccch
Confidence 355677888888878665433221 122344322 12221111 22344 88777754
Q ss_pred hHHHHHHhCCcEEecCCccchhhHH---HHHHh--hCeeeeeeccCCCCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHH
Q 038300 305 SVMESMRLGVPIIAMPMHVDQPLNA---RLVED--VGIGLEVRRNKCGRIQREEMARVIKEVVMEREGEKIKRKTREMGE 379 (401)
Q Consensus 305 s~~eal~~GvP~i~~P~~~dQ~~na---~~~~~--~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~ 379 (401)
++..++ .-.|+|.+|....+.... ..+.+ .|+++-.- ..+ +...-.-..-++|. -.+++++++.++.++
T Consensus 71 gvva~~-t~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv--~i~--~~~nAA~~A~~ILa-~~d~~l~~kl~~~~~ 144 (150)
T PF00731_consen 71 GVVASL-TTLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATV--GIN--NGFNAALLAARILA-LKDPELREKLRAYRE 144 (150)
T ss_dssp HHHHHH-SSS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE---SST--HHHHHHHHHHHHHH-TT-HHHHHHHHHHHH
T ss_pred hhheec-cCCCEEEeecCcccccCcccHHHHHhccCCCCceEE--Ecc--CchHHHHHHHHHHh-cCCHHHHHHHHHHHH
Confidence 333333 379999999976644322 22333 26665441 011 22222222334442 116788888888777
Q ss_pred HHHh
Q 038300 380 KIKE 383 (401)
Q Consensus 380 ~~~~ 383 (401)
..++
T Consensus 145 ~~~~ 148 (150)
T PF00731_consen 145 KMKE 148 (150)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 6654
No 223
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=33.99 E-value=1.2e+02 Score=29.02 Aligned_cols=70 Identities=16% Similarity=0.322 Sum_probs=46.7
Q ss_pred CcceEEecCCchhHHHHHHh------------C-----CcEEecCCccchhhHHHHHHhhCeeeeee-ccCCCCCCHHHH
Q 038300 293 SIGGFVSHCGWSSVMESMRL------------G-----VPIIAMPMHVDQPLNARLVEDVGIGLEVR-RNKCGRIQREEM 354 (401)
Q Consensus 293 ~~~~~i~hgG~~s~~eal~~------------G-----vP~i~~P~~~dQ~~na~~~~~~g~g~~l~-~~~~~~~~~~~l 354 (401)
+.++++|.||..+.+-|+.+ | .|.|.++-.. |+-..+.+.-.|+|+..- .++...++.+++
T Consensus 103 ~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~a-H~S~~Kaa~~lGlg~~~I~~~~~~~md~~~L 181 (373)
T PF00282_consen 103 DAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQA-HYSIEKAARILGLGVRKIPTDEDGRMDIEAL 181 (373)
T ss_dssp TSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS--THHHHHHHHTTSEEEEE-BBTTSSB-HHHH
T ss_pred CCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccc-ccHHHHhcceeeeEEEEecCCcchhhhHHHh
Confidence 36789999998887766532 3 4566666555 466666666779995443 323467899999
Q ss_pred HHHHHHHhc
Q 038300 355 ARVIKEVVM 363 (401)
Q Consensus 355 ~~~i~~~l~ 363 (401)
+++|++...
T Consensus 182 ~~~l~~~~~ 190 (373)
T PF00282_consen 182 EKALEKDIA 190 (373)
T ss_dssp HHHHHHHHH
T ss_pred hhhhccccc
Confidence 999987654
No 224
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=33.74 E-value=58 Score=27.85 Aligned_cols=32 Identities=25% Similarity=0.292 Sum_probs=24.0
Q ss_pred CCCEEE-EcCC-CCcHHHHHHhcCCCeEEEeccc
Q 038300 78 SPDLLI-YDLI-QPWAPALASSLNIPAVYFLVSS 109 (401)
Q Consensus 78 ~pD~vI-~D~~-~~~~~~~A~~lgIP~v~~~~~~ 109 (401)
.||+|| +|+. -.-+..-|.++|||.|.+.-+.
T Consensus 108 ~Pdlliv~dp~~~~~Av~EA~~l~IP~Iai~DTn 141 (196)
T TIGR01012 108 EPEVVVVTDPRADHQALKEASEVGIPIVALCDTD 141 (196)
T ss_pred CCCEEEEECCccccHHHHHHHHcCCCEEEEeeCC
Confidence 588765 7753 3446678899999999997764
No 225
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=33.07 E-value=89 Score=29.30 Aligned_cols=84 Identities=13% Similarity=0.107 Sum_probs=48.6
Q ss_pred CCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCC---ce-EEcc--cCchh-hhcccCCcceEE
Q 038300 226 FLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKER---AM-VIEG--WAPQM-KILGHPSIGGFV 298 (401)
Q Consensus 226 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~--~~p~~-~~l~~~~~~~~i 298 (401)
..+.+.+.++++.|.+.+.+++.. +..... ..-+.+....... ++ -+.+ -+.+. .+++++++ ||
T Consensus 196 ~Wp~e~~a~l~~~l~~~~~~vvl~-Gg~~e~------~~~~~i~~~~~~~~~~~~~~l~g~~sL~el~ali~~a~l--~I 266 (348)
T PRK10916 196 RWPHYHYAELAQQLIDEGYQVVLF-GSAKDH------EAGNEILAALNTEQQAWCRNLAGETQLEQAVILIAACKA--IV 266 (348)
T ss_pred CCCHHHHHHHHHHHHHCCCeEEEE-eCHHhH------HHHHHHHHhcccccccceeeccCCCCHHHHHHHHHhCCE--EE
Confidence 345677888888887667776654 321110 0111111111110 11 1222 23343 88999999 99
Q ss_pred ecCCchhHHHHHHhCCcEEec
Q 038300 299 SHCGWSSVMESMRLGVPIIAM 319 (401)
Q Consensus 299 ~hgG~~s~~eal~~GvP~i~~ 319 (401)
+. -.|-+.=|.+.|+|+|++
T Consensus 267 ~n-DTGp~HlAaA~g~P~val 286 (348)
T PRK10916 267 TN-DSGLMHVAAALNRPLVAL 286 (348)
T ss_pred ec-CChHHHHHHHhCCCEEEE
Confidence 84 457888899999999875
No 226
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=32.84 E-value=2.8e+02 Score=26.60 Aligned_cols=77 Identities=21% Similarity=0.393 Sum_probs=53.3
Q ss_pred hhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCee-eeeeccCCCCCCHHHHHHHHHHHhcC
Q 038300 286 MKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIG-LEVRRNKCGRIQREEMARVIKEVVME 364 (401)
Q Consensus 286 ~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g-~~l~~~~~~~~~~~~l~~~i~~~l~~ 364 (401)
..+++++++ +|. .=+=|+.-|++.|+|.|++-+. +.+...+++.|.- ..+ ....++.+.+...+.+.+.+
T Consensus 280 ~~~l~~~dl--~Vg-~R~HsaI~al~~g~p~i~i~Y~---~K~~~l~~~~gl~~~~~---~i~~~~~~~l~~~~~e~~~~ 350 (385)
T COG2327 280 GGILAACDL--IVG-MRLHSAIMALAFGVPAIAIAYD---PKVRGLMQDLGLPGFAI---DIDPLDAEILSAVVLERLTK 350 (385)
T ss_pred HHHhccCce--EEe-ehhHHHHHHHhcCCCeEEEeec---HHHHHHHHHcCCCcccc---cCCCCchHHHHHHHHHHHhc
Confidence 357778887 774 2345788899999999998763 4444666666554 223 34778999999999888864
Q ss_pred cccHHHHHH
Q 038300 365 REGEKIKRK 373 (401)
Q Consensus 365 ~~~~~~~~~ 373 (401)
.++.+++
T Consensus 351 --~~~~~~~ 357 (385)
T COG2327 351 --LDELRER 357 (385)
T ss_pred --cHHHHhh
Confidence 4555554
No 227
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=32.68 E-value=1.1e+02 Score=27.43 Aligned_cols=53 Identities=15% Similarity=0.344 Sum_probs=37.5
Q ss_pred cCCcceEEecCCchhHHHHHH-hCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcC
Q 038300 291 HPSIGGFVSHCGWSSVMESMR-LGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVME 364 (401)
Q Consensus 291 ~~~~~~~i~hgG~~s~~eal~-~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~ 364 (401)
++++ +|+=||=||+..++. .++|++.+-... .|... .++.+++.+++.+++++
T Consensus 41 ~~d~--vi~iGGDGT~L~a~~~~~~Pilgin~G~-------------lGfl~------~~~~~~~~~~l~~~~~g 94 (256)
T PRK14075 41 TADL--IIVVGGDGTVLKAAKKVGTPLVGFKAGR-------------LGFLS------SYTLEEIDRFLEDLKNW 94 (256)
T ss_pred CCCE--EEEECCcHHHHHHHHHcCCCEEEEeCCC-------------Ccccc------ccCHHHHHHHHHHHHcC
Confidence 3455 999999999999876 477877765321 34322 45678888888888863
No 228
>PHA02754 hypothetical protein; Provisional
Probab=32.44 E-value=85 Score=20.67 Aligned_cols=29 Identities=31% Similarity=0.573 Sum_probs=21.9
Q ss_pred CHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc
Q 038300 350 QREEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG 385 (401)
Q Consensus 350 ~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~ 385 (401)
++++|.++| . ++.|++..++++..+.+.|
T Consensus 3 kAeEi~k~i----~---eK~Fke~MRelkD~LSe~G 31 (67)
T PHA02754 3 KAEEIPKAI----M---EKDFKEAMRELKDILSEAG 31 (67)
T ss_pred cHHHHHHHH----H---HhHHHHHHHHHHHHHhhCc
Confidence 456666655 3 4889999999999988765
No 229
>PF00391 PEP-utilizers: PEP-utilising enzyme, mobile domain; InterPro: IPR008279 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ]. All these enzymes share the same catalytic mechanism: they bind PEP and transfer the phosphoryl group from it to a histidine residue. This domain is a "swivelling" beta/beta/alpha domain which is thought to be mobile in all proteins known to contain it []. It is often found associated with the pyruvate phosphate dikinase, PEP/pyruvate-binding domain (IPR002192 from INTERPRO) at its N terminus.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016310 phosphorylation; PDB: 2X0S_A 2OLS_A 2HRO_A 2E28_A 2WQD_A 3T05_D 3T0T_D 3T07_B 2DIK_A 2FM4_A ....
Probab=32.33 E-value=53 Score=23.30 Aligned_cols=30 Identities=23% Similarity=0.164 Sum_probs=21.6
Q ss_pred CCCEEEEc--CCCCcHHHHHHhcCCCeEEEec
Q 038300 78 SPDLLIYD--LIQPWAPALASSLNIPAVYFLV 107 (401)
Q Consensus 78 ~pD~vI~D--~~~~~~~~~A~~lgIP~v~~~~ 107 (401)
+.--||++ .....+..+|+.+|||+++-..
T Consensus 30 ~~~Giv~~~Gg~~SH~aIlAr~~giP~ivg~~ 61 (80)
T PF00391_consen 30 RVAGIVTEEGGPTSHAAILARELGIPAIVGVG 61 (80)
T ss_dssp TSSEEEESSSSTTSHHHHHHHHTT-EEEESTT
T ss_pred heEEEEEEcCCccchHHHHHHHcCCCEEEeec
Confidence 55667766 4556778899999999988543
No 230
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]
Probab=32.28 E-value=1.1e+02 Score=25.74 Aligned_cols=38 Identities=24% Similarity=0.209 Sum_probs=29.4
Q ss_pred HHHHHHhhcCCCEEEE-c-CCCCcHHHHHHhcCCCeEEEe
Q 038300 69 SFFNILKNLSPDLLIY-D-LIQPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~-D-~~~~~~~~~A~~lgIP~v~~~ 106 (401)
.+.+.++..++|.|++ + .-++.+..+|.++|+|+|..-
T Consensus 44 ~~~~~~~~~~id~Iv~iea~Gi~~a~~vA~~Lgvp~v~vR 83 (179)
T COG0503 44 ELAERYKDDGIDKIVTIEARGIPLAAAVALELGVPFVPVR 83 (179)
T ss_pred HHHHHhcccCCCEEEEEccccchhHHHHHHHhCCCEEEEE
Confidence 5666666668999984 3 455778899999999999874
No 231
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=32.14 E-value=1.5e+02 Score=27.43 Aligned_cols=82 Identities=11% Similarity=0.111 Sum_probs=47.6
Q ss_pred CCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceE-Ecc--cCchh-hhcccCCcceEEecCC
Q 038300 227 LSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMV-IEG--WAPQM-KILGHPSIGGFVSHCG 302 (401)
Q Consensus 227 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~p~~-~~l~~~~~~~~i~hgG 302 (401)
.+.+.+.++++.|.+.+.+++.. |..... ..-+.+.+.. +.+++ +.+ -+.+. .+++++++ ||+.=
T Consensus 191 Wp~e~~~~li~~l~~~~~~ivl~-G~~~e~------~~~~~i~~~~-~~~~~~l~g~~sL~el~ali~~a~l--~I~~D- 259 (334)
T TIGR02195 191 WPHEHYAELAKRLIDQGYQVVLF-GSAKDH------PAGNEIEALL-PGELRNLAGETSLDEAVDLIALAKA--VVTND- 259 (334)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEE-EChhhH------HHHHHHHHhC-CcccccCCCCCCHHHHHHHHHhCCE--EEeeC-
Confidence 44567778888886667776654 432110 0111221111 11221 112 23343 88999999 99854
Q ss_pred chhHHHHHHhCCcEEec
Q 038300 303 WSSVMESMRLGVPIIAM 319 (401)
Q Consensus 303 ~~s~~eal~~GvP~i~~ 319 (401)
.|-+.=|.+.|+|+|++
T Consensus 260 SGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 260 SGLMHVAAALNRPLVAL 276 (334)
T ss_pred CHHHHHHHHcCCCEEEE
Confidence 57788899999999975
No 232
>COG3195 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.95 E-value=2.1e+02 Score=23.64 Aligned_cols=91 Identities=15% Similarity=0.179 Sum_probs=56.8
Q ss_pred cccCCcceEEecCC---chhHHHHHHhCCcEEecCCc-cchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcC
Q 038300 289 LGHPSIGGFVSHCG---WSSVMESMRLGVPIIAMPMH-VDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVME 364 (401)
Q Consensus 289 l~~~~~~~~i~hgG---~~s~~eal~~GvP~i~~P~~-~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~ 364 (401)
-.||++.+-+--.| .-|+.|-..+|.=-+.==-+ -=+..|+.+.+.-|.=.++ --+..++++|.++.++=+++
T Consensus 70 raHPdLAgk~a~a~elta~S~~EQasAGLd~Ls~~E~a~f~~LN~aY~~rFgfPfI~---aVkg~~k~~Il~a~~~Rl~n 146 (176)
T COG3195 70 RAHPDLAGKAAIAGELTAESTSEQASAGLDRLSPEEFARFTELNAAYVERFGFPFII---AVKGNTKDTILAAFERRLDN 146 (176)
T ss_pred HhChhhHHHHHHHHHhhhhhHHHHHhcCcccCCHHHHHHHHHHHHHHHHhcCCceEE---eecCCCHHHHHHHHHHHhcc
Confidence 35777743332222 44667777666543210000 1145699999998888766 33556899999988888876
Q ss_pred cccHHHHHHHHHHHHHHH
Q 038300 365 REGEKIKRKTREMGEKIK 382 (401)
Q Consensus 365 ~~~~~~~~~a~~~~~~~~ 382 (401)
+++.+++..+.++.+..+
T Consensus 147 ~~e~E~~tAl~eI~rIA~ 164 (176)
T COG3195 147 DREQEFATALAEIERIAL 164 (176)
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 656677777777666543
No 233
>KOG1344 consensus Predicted histone deacetylase [Chromatin structure and dynamics]
Probab=31.87 E-value=1.6e+02 Score=25.75 Aligned_cols=44 Identities=18% Similarity=0.297 Sum_probs=27.4
Q ss_pred chHHHHHHHhhcCCCEEEEcCCCC--------------c--------HHHHHHhcCCCeEEEeccc
Q 038300 66 ASPSFFNILKNLSPDLLIYDLIQP--------------W--------APALASSLNIPAVYFLVSS 109 (401)
Q Consensus 66 ~~~~l~~~l~~~~pD~vI~D~~~~--------------~--------~~~~A~~lgIP~v~~~~~~ 109 (401)
+...++.-+++.+||+||+..-+- . ....++.+|||.+.+.+.+
T Consensus 236 l~r~l~~sl~ef~Pd~VvYNAGTDiLeGDpLG~L~ISp~Gi~~RDelVFr~~R~~~iPvvMltSGG 301 (324)
T KOG1344|consen 236 LKRCLMQSLAEFRPDMVVYNAGTDILEGDPLGNLAISPEGIIERDELVFRTFRALGIPVVMLTSGG 301 (324)
T ss_pred HHHHHHHHHHhhCCcEEEEeCCCccccCCCCCCeeecccccchhhHHHHHHHHHcCCcEEEEecCc
Confidence 345566666778999999752211 1 1234567788888776653
No 234
>TIGR01862 N2-ase-Ialpha nitrogenase component I, alpha chain. This model represents the alpha chain of all three varieties (Mo-Fe, V-Fe, and Fe-Fe) of component I of nitrogenase.
Probab=31.29 E-value=57 Score=31.96 Aligned_cols=34 Identities=26% Similarity=0.463 Sum_probs=27.6
Q ss_pred HHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEE
Q 038300 69 SFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYF 105 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~ 105 (401)
.+.+.+++.+||++|... .+..+|+++|||++-.
T Consensus 378 e~~~~i~~~~pdllig~s---~~~~~A~~lgip~~~~ 411 (443)
T TIGR01862 378 EFEEILEKLKPDIIFSGI---KEKFVAQKLGVPYRQM 411 (443)
T ss_pred HHHHHHHhcCCCEEEEcC---cchhhhhhcCCCeEec
Confidence 556667788999999764 5788999999999864
No 235
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=31.28 E-value=1.3e+02 Score=27.23 Aligned_cols=57 Identities=12% Similarity=0.212 Sum_probs=38.4
Q ss_pred hhhcccCCcceEEecCCchhHHHHHH----hCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHH
Q 038300 286 MKILGHPSIGGFVSHCGWSSVMESMR----LGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEV 361 (401)
Q Consensus 286 ~~~l~~~~~~~~i~hgG~~s~~eal~----~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~ 361 (401)
.++...+++ +|+=||=||+..++. .++|++.+-... .|... .++++++.+.+.++
T Consensus 37 ~~~~~~~d~--vi~iGGDGT~L~aa~~~~~~~~PilgIn~G~-------------lGFL~------~~~~~~~~~~l~~~ 95 (272)
T PRK02231 37 EEIGQRAQL--AIVIGGDGNMLGRARVLAKYDIPLIGINRGN-------------LGFLT------DIDPKNAYEQLEAC 95 (272)
T ss_pred HHhCcCCCE--EEEECCcHHHHHHHHHhccCCCcEEEEeCCC-------------Ccccc------cCCHHHHHHHHHHH
Confidence 444455677 999999999998765 368888775421 34322 35667777777777
Q ss_pred hc
Q 038300 362 VM 363 (401)
Q Consensus 362 l~ 363 (401)
+.
T Consensus 96 ~~ 97 (272)
T PRK02231 96 LE 97 (272)
T ss_pred Hh
Confidence 65
No 236
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=31.13 E-value=1.1e+02 Score=27.98 Aligned_cols=56 Identities=11% Similarity=0.221 Sum_probs=39.3
Q ss_pred hcccCCcceEEecCCchhHHHHHH----hCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhc
Q 038300 288 ILGHPSIGGFVSHCGWSSVMESMR----LGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 288 ~l~~~~~~~~i~hgG~~s~~eal~----~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
+...+++ +|+=||=||+..++. .++|++.+-... +|.. ..++++++.++++++++
T Consensus 60 ~~~~~d~--vi~lGGDGT~L~aa~~~~~~~~Pilgin~G~-------------lGFl------~~~~~~~~~~~l~~i~~ 118 (292)
T PRK03378 60 IGQQADL--AIVVGGDGNMLGAARVLARYDIKVIGINRGN-------------LGFL------TDLDPDNALQQLSDVLE 118 (292)
T ss_pred cCCCCCE--EEEECCcHHHHHHHHHhcCCCCeEEEEECCC-------------CCcc------cccCHHHHHHHHHHHHc
Confidence 3344666 999999999999974 367888776421 2332 24567888899988886
Q ss_pred C
Q 038300 364 E 364 (401)
Q Consensus 364 ~ 364 (401)
+
T Consensus 119 g 119 (292)
T PRK03378 119 G 119 (292)
T ss_pred C
Confidence 3
No 237
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=30.81 E-value=45 Score=32.91 Aligned_cols=66 Identities=21% Similarity=0.271 Sum_probs=40.9
Q ss_pred ecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcccHHHHHHHH
Q 038300 299 SHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMEREGEKIKRKTR 375 (401)
Q Consensus 299 ~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~ 375 (401)
-|=| -++.||+++|+|+++.=..|= +.-++..--|... +.+.-....+.+++.++.. ++.++.++.
T Consensus 376 E~FG-iv~IEAMa~glPvvAt~~GGP----~EiV~~~~tG~l~---dp~~e~~~~~a~~~~kl~~---~p~l~~~~~ 441 (495)
T KOG0853|consen 376 EHFG-IVPIEAMACGLPVVATNNGGP----AEIVVHGVTGLLI---DPGQEAVAELADALLKLRR---DPELWARMG 441 (495)
T ss_pred CCcc-ceeHHHHhcCCCEEEecCCCc----eEEEEcCCcceee---CCchHHHHHHHHHHHHHhc---CHHHHHHHH
Confidence 3445 379999999999998754321 1122223346665 3322223369999999998 677765544
No 238
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=30.77 E-value=1.3e+02 Score=27.86 Aligned_cols=54 Identities=15% Similarity=0.300 Sum_probs=38.5
Q ss_pred ccCCcceEEecCCchhHHHHHHh----CCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcC
Q 038300 290 GHPSIGGFVSHCGWSSVMESMRL----GVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVME 364 (401)
Q Consensus 290 ~~~~~~~~i~hgG~~s~~eal~~----GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~ 364 (401)
..+++ +|+=||=||+..++.. ++|++++-.. ..|.. .+++.+++.+++++++++
T Consensus 67 ~~~Dl--vi~iGGDGTlL~aar~~~~~~iPilGIN~G-------------~lGFL------t~~~~~~~~~~l~~l~~g 124 (305)
T PRK02649 67 SSMKF--AIVLGGDGTVLSAARQLAPCGIPLLTINTG-------------HLGFL------TEAYLNQLDEAIDQVLAG 124 (305)
T ss_pred cCcCE--EEEEeCcHHHHHHHHHhcCCCCcEEEEeCC-------------CCccc------ccCCHHHHHHHHHHHHcC
Confidence 34566 9999999999999774 7898887541 13322 245678888888888863
No 239
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=30.73 E-value=3.3e+02 Score=26.61 Aligned_cols=30 Identities=13% Similarity=0.277 Sum_probs=18.9
Q ss_pred EEecCCch-hHHHHHHhCCcEEecCCccchh
Q 038300 297 FVSHCGWS-SVMESMRLGVPIIAMPMHVDQP 326 (401)
Q Consensus 297 ~i~hgG~~-s~~eal~~GvP~i~~P~~~dQ~ 326 (401)
++..+|.. .....++.+.=++++|...|-.
T Consensus 353 v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~ 383 (476)
T cd03791 353 VAVLIGYDEALAHLIYAGADFFLMPSRFEPC 383 (476)
T ss_pred EEEEEeCCHHHHHHHHHhCCEEECCCCCCCC
Confidence 33444444 3445678888899999765543
No 240
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=30.44 E-value=70 Score=29.81 Aligned_cols=33 Identities=30% Similarity=0.355 Sum_probs=24.7
Q ss_pred CCCEEE-EcC-CCCcHHHHHHhcCCCeEEEeccch
Q 038300 78 SPDLLI-YDL-IQPWAPALASSLNIPAVYFLVSSA 110 (401)
Q Consensus 78 ~pD~vI-~D~-~~~~~~~~A~~lgIP~v~~~~~~~ 110 (401)
.||+|| +|. --..+..-|.++|||.|.+.-+.+
T Consensus 152 ~Pd~viv~d~~~e~~AI~EA~kl~IPvIaivDTn~ 186 (326)
T PRK12311 152 LPDLLFVIDTNKEDIAIQEAQRLGIPVAAIVDTNC 186 (326)
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEeeCCC
Confidence 599766 674 444566788999999999987643
No 241
>cd06559 Endonuclease_V Endonuclease_V, a DNA repair enzyme that initiates repair of nitrosative deaminated purine bases. Endonuclease_V (EndoV) is an enzyme that can initiate repair of all possible deaminated DNA bases. EndoV cleaves the DNA strand containing lesions at the second phosphodiester bond 3' to the lesion using Mg2+ as a cofactor. EndoV homologs are conserved throughout all domains of life from bacteria to humans. EndoV is encoded by the nfi gene and nfi null mutant mice have a phenotype prone to cancer. The ability of endonuclease V to recognize mismatches and abnormal replicative DNA structures suggests that the enzyme plays an important role in DNA metabolism. The details of downstream processing for the EndoV pathway remain unknown.
Probab=30.44 E-value=64 Score=27.94 Aligned_cols=42 Identities=33% Similarity=0.499 Sum_probs=27.7
Q ss_pred hHHHHHHHhhcC--CCEEEEcCCC---CcHHHHH----HhcCCCeEEEecc
Q 038300 67 SPSFFNILKNLS--PDLLIYDLIQ---PWAPALA----SSLNIPAVYFLVS 108 (401)
Q Consensus 67 ~~~l~~~l~~~~--pD~vI~D~~~---~~~~~~A----~~lgIP~v~~~~~ 108 (401)
.+.+.+.+++++ ||+|++|-.. +-...+| -.+++|.|...=.
T Consensus 80 ~p~l~~~~~~l~~~PDlilVDG~G~~HpR~~GlA~HlGv~l~~PtIGVAK~ 130 (208)
T cd06559 80 GPPLLEALEKLKTKPDLLLVDGHGIAHPRRFGLASHLGVLLDLPTIGVAKS 130 (208)
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCccccCCCcchhheeeeecCCCEEEEEcc
Confidence 555777777764 9999999442 2233344 5667888887654
No 242
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=30.31 E-value=59 Score=27.55 Aligned_cols=41 Identities=27% Similarity=0.267 Sum_probs=21.9
Q ss_pred hHHHHHHHhhcCCCEEE-Ec-CCCCcHHHHHHhcCCCeEEEec
Q 038300 67 SPSFFNILKNLSPDLLI-YD-LIQPWAPALASSLNIPAVYFLV 107 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI-~D-~~~~~~~~~A~~lgIP~v~~~~ 107 (401)
...++..++..+||++| ++ -+++.....|++.|||.+.+..
T Consensus 84 ~~~~~rfl~~~~P~~~i~~EtElWPnll~~a~~~~ip~~LvNa 126 (186)
T PF04413_consen 84 PWAVRRFLDHWRPDLLIWVETELWPNLLREAKRRGIPVVLVNA 126 (186)
T ss_dssp HHHHHHHHHHH--SEEEEES----HHHHHH-----S-EEEEEE
T ss_pred HHHHHHHHHHhCCCEEEEEccccCHHHHHHHhhcCCCEEEEee
Confidence 34467788889999765 55 4556667788999999999865
No 243
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=30.19 E-value=90 Score=28.38 Aligned_cols=52 Identities=13% Similarity=0.325 Sum_probs=35.9
Q ss_pred cCCcceEEecCCchhHHHHHH---hCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhc
Q 038300 291 HPSIGGFVSHCGWSSVMESMR---LGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 291 ~~~~~~~i~hgG~~s~~eal~---~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
.+++ +|+-||=||+.+++. .++|++.++... .|. + ..++.+++.+++.++++
T Consensus 57 ~~d~--vi~iGGDGTlL~a~~~~~~~~pi~gIn~G~-------------lGF-l-----~~~~~~~~~~~l~~i~~ 111 (277)
T PRK03708 57 DVDF--IIAIGGDGTILRIEHKTKKDIPILGINMGT-------------LGF-L-----TEVEPEETFFALSRLLE 111 (277)
T ss_pred CCCE--EEEEeCcHHHHHHHHhcCCCCeEEEEeCCC-------------CCc-c-----ccCCHHHHHHHHHHHHc
Confidence 3455 999999999999884 456888888532 121 1 23456777778877776
No 244
>TIGR01284 alt_nitrog_alph nitrogenase alpha chain. This model represents the alpha chains of various forms of the nitrogen-fixing enzyme nitrogenase: vanadium-iron, iron-iron, and molybdenum-iron. Most examples of NifD, the molybdenum-iron type nitrogenase alpha chain, are excluded from this model and described instead by equivalog model TIGR01282. It appears by phylogenetic and UPGMA trees that this model represents a distinct clade of NifD homologs, in which arose several molybdenum-independent forms.
Probab=30.07 E-value=54 Score=32.30 Aligned_cols=34 Identities=21% Similarity=0.479 Sum_probs=28.1
Q ss_pred HHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEE
Q 038300 69 SFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYF 105 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~ 105 (401)
.+.+.+++.+||++|... .+..+|+++|||++.+
T Consensus 386 e~~~~i~~~~pDllig~~---~~~~~a~k~gip~~~~ 419 (457)
T TIGR01284 386 ELEEIIEKYKPDIILTGI---REGELAKKLGVPYINI 419 (457)
T ss_pred HHHHHHHhcCCCEEEecC---CcchhhhhcCCCEEEc
Confidence 567778888999999764 4678999999999876
No 245
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=30.00 E-value=1.1e+02 Score=26.87 Aligned_cols=87 Identities=10% Similarity=0.197 Sum_probs=46.1
Q ss_pred hCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEccc--Cch-hhhcccCCcceEEecC
Q 038300 225 YFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGW--APQ-MKILGHPSIGGFVSHC 301 (401)
Q Consensus 225 ~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~-~~~l~~~~~~~~i~hg 301 (401)
-..+.+.+.++++.|.+.+++++...++. .. ....-+.+.+......+.+.+- +.+ ..+++++++ +|+.-
T Consensus 119 k~wp~e~~~~l~~~l~~~~~~vvl~g~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~a~~--~I~~D 191 (247)
T PF01075_consen 119 KRWPAEKWAELIERLKERGYRVVLLGGPE-EQ----EKEIADQIAAGLQNPVINLAGKTSLRELAALISRADL--VIGND 191 (247)
T ss_dssp GS--HHHHHHHHHHHCCCT-EEEE--SSH-HH----HHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHTSSE--EEEES
T ss_pred ccCCHHHHHHHHHHHHhhCceEEEEccch-HH----HHHHHHHHHHhcccceEeecCCCCHHHHHHHHhcCCE--EEecC
Confidence 34456788899999977776665443321 00 0000011111111113333332 233 388889998 99855
Q ss_pred CchhHHHHHHhCCcEEec
Q 038300 302 GWSSVMESMRLGVPIIAM 319 (401)
Q Consensus 302 G~~s~~eal~~GvP~i~~ 319 (401)
-|.+.=|.+.|+|+|++
T Consensus 192 -tg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 192 -TGPMHLAAALGTPTVAL 208 (247)
T ss_dssp -SHHHHHHHHTT--EEEE
T ss_pred -ChHHHHHHHHhCCEEEE
Confidence 47889999999999998
No 246
>TIGR02015 BchY chlorophyllide reductase subunit Y. This model represents the Y subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase.
Probab=29.70 E-value=64 Score=31.39 Aligned_cols=32 Identities=31% Similarity=0.443 Sum_probs=26.1
Q ss_pred HHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEe
Q 038300 72 NILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 72 ~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~ 106 (401)
+.+++.+||++|.. +-+..+|+++|||.+-+.
T Consensus 349 ~~l~~~~pDllig~---s~~~~~A~k~gIP~vr~g 380 (422)
T TIGR02015 349 EAVLEFEPDLAIGT---TPLVQFAKEHGIPALYFT 380 (422)
T ss_pred HHHhhCCCCEEEcC---CcchHHHHHcCCCEEEec
Confidence 45577799999977 446789999999998864
No 247
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=29.58 E-value=68 Score=27.66 Aligned_cols=32 Identities=25% Similarity=0.300 Sum_probs=24.0
Q ss_pred CCCEEE-EcCC-CCcHHHHHHhcCCCeEEEeccc
Q 038300 78 SPDLLI-YDLI-QPWAPALASSLNIPAVYFLVSS 109 (401)
Q Consensus 78 ~pD~vI-~D~~-~~~~~~~A~~lgIP~v~~~~~~ 109 (401)
.||+|| +|+. -.-+..-|.++|||.|.+.-+.
T Consensus 114 ~Pdliiv~dp~~~~~AI~EA~kl~IP~IaivDTn 147 (204)
T PRK04020 114 EPDVVVVTDPRGDAQAVKEAIEVGIPVVALCDTD 147 (204)
T ss_pred CCCEEEEECCcccHHHHHHHHHhCCCEEEEEeCC
Confidence 789766 7753 3345678899999999998764
No 248
>PRK04940 hypothetical protein; Provisional
Probab=29.34 E-value=94 Score=26.20 Aligned_cols=32 Identities=22% Similarity=0.190 Sum_probs=24.8
Q ss_pred CCCEEE-EcCCCCcHHHHHHhcCCCeEEEeccc
Q 038300 78 SPDLLI-YDLIQPWAPALASSLNIPAVYFLVSS 109 (401)
Q Consensus 78 ~pD~vI-~D~~~~~~~~~A~~lgIP~v~~~~~~ 109 (401)
++.+|| +-.-..|+..+|++.|+|.|.+.|.-
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~aVLiNPAv 92 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQVIFNPNL 92 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCEEEECCCC
Confidence 456777 33555678889999999999998863
No 249
>PF02075 RuvC: Crossover junction endodeoxyribonuclease RuvC; InterPro: IPR002176 The Escherichia coli ruvC gene is involved in DNA repair and in the late step of RecE and RecF pathway recombination []. RuvC protein (3.1.22.4 from EC) cleaves cruciform junctions, which are formed by the extrusion of inverted repeat sequences from a super-coiled plasmid and which are structurally analogous to Holliday junctions, by introducing nicks into strands with the same polarity. The nicks leave a 5'terminal phosphate and a 3'terminal hydroxyl group which are ligated by E. coli or Bacteriophage T4 DNA ligases. Analysis of the cleavage sites suggests that DNA topology rather than a particular sequence determines the cleavage site. RuvC protein also cleaves Holliday junctions that are formed between gapped circular and linear duplex DNA by the function of RecA protein. The active form of RuvC protein is a dimer. This is mechanistically suited for an endonuclease involved in swapping DNA strands at the crossover junctions. It is inferred that RuvC protein is an endonuclease that resolves Holliday structures in vivo []. RucC is a small protein of about 20 kD. It requires and binds a magnesium ion. The structure of E. coli ruvC is a 3-layer alpha-beta sandwich containing a 5-stranded beta-sheet sandwiched between 5 alpha-helices [].; GO: 0004520 endodeoxyribonuclease activity, 0006281 DNA repair, 0006310 DNA recombination; PDB: 1HJR_A.
Probab=29.27 E-value=1e+02 Score=25.02 Aligned_cols=49 Identities=14% Similarity=0.177 Sum_probs=27.5
Q ss_pred HHHHhhchHHHHHHHhhcCCCEEEEc-CCCCc--------------HHHHHHhcCCCeEEEecc
Q 038300 60 KEAFDMASPSFFNILKNLSPDLLIYD-LIQPW--------------APALASSLNIPAVYFLVS 108 (401)
Q Consensus 60 ~~~~~~~~~~l~~~l~~~~pD~vI~D-~~~~~--------------~~~~A~~lgIP~v~~~~~ 108 (401)
.+....+...+.+++++.+||.++.+ .|+.- ...++...|+|...+.|.
T Consensus 40 ~~Rl~~I~~~l~~li~~~~P~~vaiE~~f~~~n~~s~~~l~~arGvi~l~~~~~~i~v~~y~P~ 103 (149)
T PF02075_consen 40 PERLKEIYEELEELIEEYNPDEVAIEEIFFGKNPKSALKLGQARGVILLAAAQRGIPVFEYTPS 103 (149)
T ss_dssp HHHHHHHHHHHHHHHHHH--SEEEEEE-S----HHHHHHHHHHHHHHHHHHHTTT--EEEEEHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCEEEeehhhhccCHHHHHHHHHHHHHHHHHHHHcCCeEEEECHH
Confidence 34455577889999999999998887 44322 112335667777766654
No 250
>PHA01794 hypothetical protein
Probab=29.20 E-value=2.2e+02 Score=22.23 Aligned_cols=51 Identities=14% Similarity=0.241 Sum_probs=32.2
Q ss_pred CCHHHHHHHHHHHhcC--cccHHHHHHHHHHHHHHHhhc--HHHHHHHHHHHHhh
Q 038300 349 IQREEMARVIKEVVME--REGEKIKRKTREMGEKIKEKG--EEEIEWVADELIHL 399 (401)
Q Consensus 349 ~~~~~l~~~i~~~l~~--~~~~~~~~~a~~~~~~~~~~~--~~~~~~~v~~~~~~ 399 (401)
++++++..+|...+.. +++..|.+--+.+...+-+.| ...+.+.++.+...
T Consensus 50 lted~~~~aI~d~v~~~~~Ee~~~e~lF~eleqEm~~SGFF~~ki~kyien~EK~ 104 (134)
T PHA01794 50 LTEDEILDAIADFVETFEDEEGTTEGLFAELEKEMVDSGFFRAKIKKYIENMEKS 104 (134)
T ss_pred cChhhHHHHHHHHHHHhhhhcchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 5666677777776621 125567777777777777766 66666666665543
No 251
>cd08806 CARD_CARD14_CARMA2 Caspase activation and recruitment domain of CARD14-like proteins. Caspase activation and recruitment domain (CARD) similar to that found in CARD14, also known as BIMP2 or CARMA2 (caspase recruitment domain-containing membrane-associated guanylate kinase protein 2). CARD14 has been identified as a novel member of the MAGUK (membrane-associated guanylate kinase) family that functions as upstream activators of BCL10 (B-cell lymphoma 10) and NF-kB signaling. In general, CARDs are death domains (DDs) found associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation, and host-defense mechanisms. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and DED (Death Effector Domain). They serve as adaptors in signaling pathways
Probab=29.16 E-value=1.5e+02 Score=21.47 Aligned_cols=36 Identities=14% Similarity=0.266 Sum_probs=26.6
Q ss_pred HHHhcCcccHHHHHHHHH---HHHHHHhhcHHHHHHHHHHHH
Q 038300 359 KEVVMEREGEKIKRKTRE---MGEKIKEKGEEEIEWVADELI 397 (401)
Q Consensus 359 ~~~l~~~~~~~~~~~a~~---~~~~~~~~~~~~~~~~v~~~~ 397 (401)
+++++ .+.+..++.+ +=..++..|.++...|++.++
T Consensus 37 eeIls---~~t~~~r~~k~g~LLDIL~trG~~g~~aFLeSLe 75 (86)
T cd08806 37 EEVLH---SPRLTNRAMRVGHLLDLLKTRGKNGAIAFLESLK 75 (86)
T ss_pred HHHHc---cchHHHHHHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence 34555 5677777777 666667788888888988886
No 252
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=29.09 E-value=1.9e+02 Score=27.52 Aligned_cols=24 Identities=13% Similarity=0.277 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHhCCCceEEeecC
Q 038300 229 KEEMEDIALGLELSGVNFIWVVRF 252 (401)
Q Consensus 229 ~~~~~~~~~~l~~~~~~~i~~~~~ 252 (401)
|.++..++.+|.+.|+++...+..
T Consensus 10 p~~~~~la~~L~~~G~~v~~~~~~ 33 (396)
T cd03818 10 PGQFRHLAPALAAQGHEVVFLTEP 33 (396)
T ss_pred chhHHHHHHHHHHCCCEEEEEecC
Confidence 467899999999999987666554
No 253
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=28.83 E-value=5.1e+02 Score=24.57 Aligned_cols=102 Identities=24% Similarity=0.223 Sum_probs=54.2
Q ss_pred CCceEEcccCchh---hhcccCCcceEEecCCch-----hHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccC
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVSHCGWS-----SVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNK 345 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~hgG~~-----s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~ 345 (401)
+.++....-+|.. .+|..+.+ -| |+=|| |+.|.+++|.=+|+--..+--.+.-.--.-...|.
T Consensus 336 ~~~v~F~~N~Py~~lv~lL~~a~i--Gv-h~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGF------ 406 (465)
T KOG1387|consen 336 PKHVQFEKNVPYEKLVELLGKATI--GV-HTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGF------ 406 (465)
T ss_pred ccceEEEecCCHHHHHHHhcccee--eh-hhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCcccee------
Confidence 4456655556665 55555554 23 33343 79999999975554322222111111001111222
Q ss_pred CCCCCHHHHHHHHHHHhcCc--ccHHHHHHHHHHHHHHHhhc
Q 038300 346 CGRIQREEMARVIKEVVMER--EGEKIKRKTREMGEKIKEKG 385 (401)
Q Consensus 346 ~~~~~~~~l~~~i~~~l~~~--~~~~~~~~a~~~~~~~~~~~ 385 (401)
-..|.++-.++|-+++... +.-.+|++|++--+.+.+.-
T Consensus 407 -la~t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~ 447 (465)
T KOG1387|consen 407 -LAPTDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELK 447 (465)
T ss_pred -ecCChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHH
Confidence 1357788888888887531 12356777777666666544
No 254
>cd00633 Secretoglobin Secretoglobins are relatively small, secreted, disulphide-bridged dimeric proteins with encoding genes sharing substantial sequence similarity. Their family subunits may be grouped into five subfamilies, A-E. Uteroglobin (subfamily A), which is identical to Clara cell protein (CC10), forms a globular shaped homodimer with a large hydrophobic pocket located between the two dimers. The uteroglobin monomer structure is composed of four alpha helices that do not form a canonical four helix-bundle motif but rather a boomerang-shaped structure in which helices H1, H3, and H4 are able to bind a homodimeric partner. The hydrophobic pocket binds steroids, particularly progesterone, with high specificity. However, the true biological function of uteroglobin is poorly understood. In mammals, uteroglobin has immunosuppressive and anti-inflammatory properties through the inhibition of phospholipase A2. The other four main subfamilies of secretoglobins are found in heterodimeri
Probab=28.48 E-value=1.9e+02 Score=19.60 Aligned_cols=45 Identities=11% Similarity=0.238 Sum_probs=36.4
Q ss_pred CHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc---HHHHHHHHHHHH
Q 038300 350 QREEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG---EEEIEWVADELI 397 (401)
Q Consensus 350 ~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~---~~~~~~~v~~~~ 397 (401)
+.+.+...+.+.-. ++..+++..++++-+.+.+ ..++..+++.+.
T Consensus 15 s~~~y~~~L~~f~~---~~~~~~A~~~lK~C~d~~~~e~k~~~~~~m~~I~ 62 (67)
T cd00633 15 SEEEYKAELEKFNA---TPEAVEAKEKLKQCVDEQSLETKENIAKLLEKIL 62 (67)
T ss_pred CHHHHHHHHHhcCC---CHHHHHHHHHHHHHHhcCCHhHHHHHHHHHHHHH
Confidence 77888888887776 7999999999999998876 556777777664
No 255
>TIGR01860 VNFD nitrogenase vanadium-iron protein, alpha chain. This model represents the alpha chain of the vanadium-containing component of the vanadium-iron nitrogenase compound I. The complex also includes a second alpha chain, two beta chains and two delta chains. Compount I interacts with compound II also known as the iron-protein which transfers electrons to compound I where the catalysis occurs.
Probab=28.43 E-value=73 Score=31.43 Aligned_cols=31 Identities=32% Similarity=0.596 Sum_probs=24.9
Q ss_pred HHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeE
Q 038300 70 FFNILKNLSPDLLIYDLIQPWAPALASSLNIPAV 103 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v 103 (401)
+.+.+++.+||++|... .+..+|+++|||++
T Consensus 389 ~~~~~~~~~pDliig~s---~~~~~A~klgiP~v 419 (461)
T TIGR01860 389 FFEVLDLIKPDVIFTGP---RVGELVKKLHIPYV 419 (461)
T ss_pred HHHHHHhcCCCEEEeCC---cchhhHhhcCCCEE
Confidence 44556778999999774 46779999999997
No 256
>COG4394 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.39 E-value=4.7e+02 Score=24.01 Aligned_cols=55 Identities=18% Similarity=0.150 Sum_probs=37.0
Q ss_pred ceEEcccCchh---hhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHH
Q 038300 276 AMVIEGWAPQM---KILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVE 333 (401)
Q Consensus 276 ~~~~~~~~p~~---~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~ 333 (401)
.+++.+|+||. ++|--+++ -+-+ |--|...|..+|+|.+=-=+..|....-+.++
T Consensus 239 rvvklPFvpqddyd~LL~lcD~--n~VR-GEDSFVRAq~agkPflWHIYpQdentHl~KLe 296 (370)
T COG4394 239 RVVKLPFVPQDDYDELLWLCDF--NLVR-GEDSFVRAQLAGKPFLWHIYPQDENTHLAKLE 296 (370)
T ss_pred EEEEecCCcHhHHHHHHHhccc--ceee-cchHHHHHHHcCCCcEEEecCCccccHHHHHH
Confidence 46677999987 78888887 3333 56899999999999874333333333333333
No 257
>COG2874 FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=28.32 E-value=33 Score=29.82 Aligned_cols=71 Identities=15% Similarity=0.304 Sum_probs=40.1
Q ss_pred CCeEEEEEeCCccchh-hhccc--c-------CCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHH
Q 038300 2 SNFHICFCSTPSILNS-IKQLD--K-------FSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFF 71 (401)
Q Consensus 2 rG~~Vt~~~~~~~~~~-i~~~~--~-------~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 71 (401)
.||.|++++|+..... +.+.- + ..+.+.|.++.+.. +. . -....+.....+.
T Consensus 55 ~g~~v~yvsTe~T~refi~qm~sl~ydv~~~~l~G~l~~~~~~~~~---~~-----~----------~~~~~~~~L~~l~ 116 (235)
T COG2874 55 NGYRVTYVSTELTVREFIKQMESLSYDVSDFLLSGRLLFFPVNLEP---VN-----W----------GRRSARKLLDLLL 116 (235)
T ss_pred CCceEEEEEechhHHHHHHHHHhcCCCchHHHhcceeEEEEecccc---cc-----c----------ChHHHHHHHHHHH
Confidence 5899999999876443 22221 1 23456666553111 00 0 0122233445566
Q ss_pred HHHhhcCCCEEEEcCCCCc
Q 038300 72 NILKNLSPDLLIYDLIQPW 90 (401)
Q Consensus 72 ~~l~~~~pD~vI~D~~~~~ 90 (401)
+..+..+-|+||.|.+...
T Consensus 117 ~~~k~~~~dViIIDSls~~ 135 (235)
T COG2874 117 EFIKRWEKDVIIIDSLSAF 135 (235)
T ss_pred hhHHhhcCCEEEEecccHH
Confidence 6666778899999988543
No 258
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase. 2-oxoglutarate decarboxylase/SHCHC synthase (menD) is a thiamine pyrophosphate enzyme involved in menaquinone biosynthesis.
Probab=28.12 E-value=99 Score=30.12 Aligned_cols=27 Identities=30% Similarity=0.446 Sum_probs=22.2
Q ss_pred cceEEecCCch------hHHHHHHhCCcEEecC
Q 038300 294 IGGFVSHCGWS------SVMESMRLGVPIIAMP 320 (401)
Q Consensus 294 ~~~~i~hgG~~------s~~eal~~GvP~i~~P 320 (401)
.+++++|+|-| ++.+|...++|+|++-
T Consensus 64 ~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 96 (432)
T TIGR00173 64 PVAVVCTSGTAVANLLPAVIEASYSGVPLIVLT 96 (432)
T ss_pred CEEEEECCcchHhhhhHHHHHhcccCCcEEEEe
Confidence 45588888844 7889999999999993
No 259
>TIGR01283 nifE nitrogenase molybdenum-iron cofactor biosynthesis protein NifE. This protein is part of the NifEN complex involved in biosynthesis of the molybdenum-iron cofactor used by the homologous NifDK complex of nitrogenase. In a few species, the protein is found as a NifEN fusion protein.
Probab=27.98 E-value=89 Score=30.72 Aligned_cols=37 Identities=24% Similarity=0.226 Sum_probs=29.4
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEe
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~ 106 (401)
...+.+.+++.+||++|.. .....+|+++|||++.+.
T Consensus 384 ~~e~~~~i~~~~pDl~ig~---~~~~~~a~k~giP~i~~~ 420 (456)
T TIGR01283 384 PRELLKLLLEYKADLLIAG---GKERYTALKLGIPFCDIN 420 (456)
T ss_pred HHHHHHHHhhcCCCEEEEc---cchHHHHHhcCCCEEEcc
Confidence 3467788888899999975 446788999999998753
No 260
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated
Probab=27.83 E-value=74 Score=32.35 Aligned_cols=28 Identities=14% Similarity=0.354 Sum_probs=23.0
Q ss_pred CcceEEecCCch------hHHHHHHhCCcEEecC
Q 038300 293 SIGGFVSHCGWS------SVMESMRLGVPIIAMP 320 (401)
Q Consensus 293 ~~~~~i~hgG~~------s~~eal~~GvP~i~~P 320 (401)
..+++++|.|-| ++.+|...++|+|++.
T Consensus 67 ~~gv~~~t~GpG~~N~l~~i~~A~~~~~Pvlvi~ 100 (574)
T PRK06882 67 KVGCVLVTSGPGATNAITGIATAYTDSVPLVILS 100 (574)
T ss_pred CCeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 455589998854 6889999999999985
No 261
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=27.60 E-value=1.4e+02 Score=27.10 Aligned_cols=76 Identities=20% Similarity=0.232 Sum_probs=53.5
Q ss_pred hCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhhhcccCCcceEEecCCch
Q 038300 225 YFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMKILGHPSIGGFVSHCGWS 304 (401)
Q Consensus 225 ~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~i~hgG~~ 304 (401)
+..+.++.+++.+++....++.||.++...+ -..+.++++...+-++|.+ ||-.+-..
T Consensus 44 a~s~~~Ra~dL~~a~~d~~i~aI~~~rGG~g--------------------a~rlL~~ld~~~~~~~pK~--~iGySDiT 101 (282)
T cd07025 44 AGTDEERAADLNAAFADPEIKAIWCARGGYG--------------------ANRLLPYLDYDLIRANPKI--FVGYSDIT 101 (282)
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEcCCcCC--------------------HHHhhhhCCHHHHhhCCeE--EEEecHHH
Confidence 3444677899999999999999999875211 1223456666666677777 88888877
Q ss_pred hHHHHHHh--CCcEEecCCc
Q 038300 305 SVMESMRL--GVPIIAMPMH 322 (401)
Q Consensus 305 s~~eal~~--GvP~i~~P~~ 322 (401)
++.-+++. |++.+-=|..
T Consensus 102 aL~~~l~~~~g~~t~hGp~~ 121 (282)
T cd07025 102 ALHLALYAKTGLVTFHGPML 121 (282)
T ss_pred HHHHHHHHhcCceEEECccc
Confidence 77777754 7777777754
No 262
>PF07302 AroM: AroM protein; InterPro: IPR010843 This family consists of several bacterial and archaeal AroM proteins. In Escherichia coli the aroM gene is cotranscribed with aroL []. The function of this family is unknown.
Probab=27.56 E-value=1e+02 Score=26.91 Aligned_cols=35 Identities=17% Similarity=0.206 Sum_probs=26.5
Q ss_pred HHhhcCCCEEEEcCCCCcHH---HHHHhcCCCeEEEec
Q 038300 73 ILKNLSPDLLIYDLIQPWAP---ALASSLNIPAVYFLV 107 (401)
Q Consensus 73 ~l~~~~pD~vI~D~~~~~~~---~~A~~lgIP~v~~~~ 107 (401)
.|++...|+||.|++.+... .+++.+|+|++...+
T Consensus 173 ~L~~~gadlIvLDCmGYt~~~r~~~~~~~g~PVlLsr~ 210 (221)
T PF07302_consen 173 ELAEQGADLIVLDCMGYTQEMRDIVQRALGKPVLLSRT 210 (221)
T ss_pred HHHhcCCCEEEEECCCCCHHHHHHHHHHhCCCEEeHHH
Confidence 34456899999998877654 477889999987544
No 263
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=27.55 E-value=5.5e+02 Score=24.54 Aligned_cols=44 Identities=16% Similarity=0.176 Sum_probs=34.4
Q ss_pred ceEEcccCchh---hhcccCCcceEEecCCchhHHHHHHhCCcEEecCCc
Q 038300 276 AMVIEGWAPQM---KILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMH 322 (401)
Q Consensus 276 ~~~~~~~~p~~---~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~ 322 (401)
.+.+.+|+||. .+|-.+|+ -+=+ |=-|...|..+|+|.|=-.+.
T Consensus 245 ~l~~lPF~~Q~~yD~LLw~cD~--NfVR-GEDSfVRAqwAgkPFvWhIYp 291 (374)
T PF10093_consen 245 TLHVLPFVPQDDYDRLLWACDF--NFVR-GEDSFVRAQWAGKPFVWHIYP 291 (374)
T ss_pred EEEECCCCCHHHHHHHHHhCcc--ceEe-cchHHHHHHHhCCCceEecCc
Confidence 46677899997 88888887 4434 467999999999999865554
No 264
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=27.38 E-value=3.5e+02 Score=27.61 Aligned_cols=78 Identities=9% Similarity=0.089 Sum_probs=44.1
Q ss_pred HHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchh-------hhcc--cCCcceEEecCC
Q 038300 232 MEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQM-------KILG--HPSIGGFVSHCG 302 (401)
Q Consensus 232 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------~~l~--~~~~~~~i~hgG 302 (401)
-+.+++.|++.|++.|+-+.... . ..+.+.+...++.... +.++ +-+. ....+++++|.|
T Consensus 9 ~~~l~~~L~~~GV~~vFGvpG~~---------~-~~l~dal~~~~i~~i~-~rhE~~A~~~Adgyar~tg~~gv~~~t~G 77 (588)
T PRK07525 9 SEAFVETLQAHGITHAFGIIGSA---------F-MDASDLFPPAGIRFID-VAHEQNAGHMADGYTRVTGRMGMVIGQNG 77 (588)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCc---------h-HHHHHHHhccCCCEEE-ecCHHHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 45677888888998888765321 1 1111112111222110 1111 1111 224555999988
Q ss_pred c------hhHHHHHHhCCcEEecC
Q 038300 303 W------SSVMESMRLGVPIIAMP 320 (401)
Q Consensus 303 ~------~s~~eal~~GvP~i~~P 320 (401)
- +++.+|...++|+|++.
T Consensus 78 PG~~n~~~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 78 PGITNFVTAVATAYWAHTPVVLVT 101 (588)
T ss_pred ccHHHHHHHHHHHhhcCCCEEEEe
Confidence 4 47788999999999996
No 265
>TIGR01744 XPRTase xanthine phosphoribosyltransferase. This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen.
Probab=27.26 E-value=1.1e+02 Score=25.97 Aligned_cols=41 Identities=12% Similarity=0.057 Sum_probs=28.8
Q ss_pred hHHHHHHHhhcCCCEEE-Ec-CCCCcHHHHHHhcCCCeEEEec
Q 038300 67 SPSFFNILKNLSPDLLI-YD-LIQPWAPALASSLNIPAVYFLV 107 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI-~D-~~~~~~~~~A~~lgIP~v~~~~ 107 (401)
...+.+.+++.++|+|+ .+ --++.+..+|..+|+|++...-
T Consensus 39 ~~~l~~~~~~~~~d~Vv~~ea~Gi~la~~lA~~Lg~p~v~vRK 81 (191)
T TIGR01744 39 GEEFARRFADDGITKIVTIEASGIAPAIMTGLKLGVPVVFARK 81 (191)
T ss_pred HHHHHHHhccCCCCEEEEEccccHHHHHHHHHHHCCCEEEEEe
Confidence 33444555566899998 33 2336777899999999998765
No 266
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=27.13 E-value=1.6e+02 Score=29.98 Aligned_cols=93 Identities=14% Similarity=0.194 Sum_probs=50.2
Q ss_pred chhhhcccCCcceEEec---CCchhHHHHHHhCCcEEecCCcc-chhhHHH--HHHhhCeeeeeeccCCCCCCHHHHHHH
Q 038300 284 PQMKILGHPSIGGFVSH---CGWSSVMESMRLGVPIIAMPMHV-DQPLNAR--LVEDVGIGLEVRRNKCGRIQREEMARV 357 (401)
Q Consensus 284 p~~~~l~~~~~~~~i~h---gG~~s~~eal~~GvP~i~~P~~~-dQ~~na~--~~~~~g~g~~l~~~~~~~~~~~~l~~~ 357 (401)
+..+++.-++++.|-|- -|. |-+||+++|||.|.-=+.+ -++.+-. .-...|+-|.= ...-+.++..+.
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGY-TPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~Vvd----R~~~n~~e~v~~ 536 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGY-TPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVD----RRDKNYDESVNQ 536 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-H-HHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-----SSSS-HHHHHHH
T ss_pred CHHHHhccCceeeeccccccccC-ChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEe----CCCCCHHHHHHH
Confidence 45577888888888763 343 8899999999999877632 1111110 11234666543 234567777777
Q ss_pred HHHHhc-----Cc-ccHHHHHHHHHHHHHH
Q 038300 358 IKEVVM-----ER-EGEKIKRKTREMGEKI 381 (401)
Q Consensus 358 i~~~l~-----~~-~~~~~~~~a~~~~~~~ 381 (401)
|.+.|. +. +-...|.+++++++.+
T Consensus 537 la~~l~~f~~~~~rqri~~Rn~ae~LS~~~ 566 (633)
T PF05693_consen 537 LADFLYKFCQLSRRQRIIQRNRAERLSDLA 566 (633)
T ss_dssp HHHHHHHHHT--HHHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 777663 11 1234566666666544
No 267
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase. Members of this protein family are sulfoacetaldehyde acetyltransferase, an enzyme of taurine utilization. Taurine, or 2-aminoethanesulfonate, can be used by bacteria as a source of carbon, nitrogen, and sulfur.
Probab=27.10 E-value=3.5e+02 Score=27.55 Aligned_cols=28 Identities=7% Similarity=0.229 Sum_probs=23.0
Q ss_pred CcceEEecCCch------hHHHHHHhCCcEEecC
Q 038300 293 SIGGFVSHCGWS------SVMESMRLGVPIIAMP 320 (401)
Q Consensus 293 ~~~~~i~hgG~~------s~~eal~~GvP~i~~P 320 (401)
..+++++|.|-| ++.+|...++|+|++.
T Consensus 64 ~~gv~~~t~GPG~~N~~~gla~A~~~~~Pvl~I~ 97 (579)
T TIGR03457 64 RMSMVIGQNGPGVTNCVTAIAAAYWAHTPVVIVT 97 (579)
T ss_pred CCEEEEECCCchHHHHHHHHHHHhhcCCCEEEEe
Confidence 455589998855 6779999999999995
No 268
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=27.05 E-value=1.8e+02 Score=26.31 Aligned_cols=54 Identities=15% Similarity=0.292 Sum_probs=37.9
Q ss_pred cCCcceEEecCCchhHHHHHHh-----CCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcC
Q 038300 291 HPSIGGFVSHCGWSSVMESMRL-----GVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVME 364 (401)
Q Consensus 291 ~~~~~~~i~hgG~~s~~eal~~-----GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~ 364 (401)
.+++ +|+=||=||+..++.. .+|++.+-..+ ..|.. .+++.+++.+++.+++++
T Consensus 39 ~~D~--vi~lGGDGT~L~a~~~~~~~~~~pilgIn~~G------------~lGFL------~~~~~~~~~~~l~~i~~g 97 (264)
T PRK03501 39 NANI--IVSIGGDGTFLQAVRKTGFREDCLYAGISTKD------------QLGFY------CDFHIDDLDKMIQAITKE 97 (264)
T ss_pred CccE--EEEECCcHHHHHHHHHhcccCCCeEEeEecCC------------CCeEc------ccCCHHHHHHHHHHHHcC
Confidence 3555 9999999999999874 56777665411 23332 246778888888888863
No 269
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=26.39 E-value=91 Score=27.99 Aligned_cols=25 Identities=20% Similarity=0.356 Sum_probs=20.4
Q ss_pred EEecCC-chhHHHHHHhCCcEEecCC
Q 038300 297 FVSHCG-WSSVMESMRLGVPIIAMPM 321 (401)
Q Consensus 297 ~i~hgG-~~s~~eal~~GvP~i~~P~ 321 (401)
-|+++| .+..+||..+|+|.|++.+
T Consensus 108 dv~ySGTVgAA~Ea~~~GiPsIA~S~ 133 (257)
T PRK13932 108 NTLYSGTVAAALEGAIQGIPSLAFSL 133 (257)
T ss_pred CEecchhHHHHHHHHHcCCCeEEEEc
Confidence 344555 6788999999999999997
No 270
>cd01977 Nitrogenase_VFe_alpha Nitrogenase_VFe_alpha -like: Nitrogenase VFe protein, alpha subunit like. This group contains proteins similar to the alpha subunits of, the VFe protein of the vanadium-dependent (V-) nitrogenase and the FeFe protein of the iron only (Fe-) nitrogenase Nitrogenase catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. In addition to V- and Fe- nitrogenases there is a molybdenum (Mo)-dependent nitrogenase which is the most widespread and best characterized of these systems. These systems consist of component 1 (VFe protein, FeFe protein or, MoFe protein respectively) and, component 2 (Fe protein). MoFe is an alpha2beta2 tetramer, V-and Fe- nitrogenases are alpha2beta2delta2 hexamers. The alpha and beta subunits of VFe and FeFe are similar to the alpha and beta subunits of MoFe. For MoFe each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha sub
Probab=25.99 E-value=73 Score=30.86 Aligned_cols=33 Identities=33% Similarity=0.603 Sum_probs=25.9
Q ss_pred HHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEE
Q 038300 70 FFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYF 105 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~ 105 (401)
+.+.+++.+||+||.... +..+|+++|||++..
T Consensus 350 ~~~~~~~~~pdliig~s~---~~~~a~~lgip~~~~ 382 (415)
T cd01977 350 FFEILEMLKPDIILTGPR---VGELVKKLHVPYVNI 382 (415)
T ss_pred HHHHHHhcCCCEEEecCc---cchhhhhcCCCEEec
Confidence 445567789999997744 557999999999876
No 271
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=25.81 E-value=1.3e+02 Score=26.76 Aligned_cols=38 Identities=29% Similarity=0.445 Sum_probs=0.0
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCCc-------HHHHHHhcCCCeEEE
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQPW-------APALASSLNIPAVYF 105 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~~-------~~~~A~~lgIP~v~~ 105 (401)
.+.|.++|++.+.|+|| |---|. +..+|+..|||++.|
T Consensus 55 ~e~l~~~l~e~~i~llI-DATHPyAa~iS~Na~~aake~gipy~r~ 99 (257)
T COG2099 55 AEGLAAFLREEGIDLLI-DATHPYAARISQNAARAAKETGIPYLRL 99 (257)
T ss_pred HHHHHHHHHHcCCCEEE-ECCChHHHHHHHHHHHHHHHhCCcEEEE
No 272
>COG4069 Uncharacterized protein conserved in archaea [Function unknown]
Probab=25.76 E-value=5e+02 Score=23.83 Aligned_cols=91 Identities=15% Similarity=0.256 Sum_probs=57.9
Q ss_pred hhcccCCcceEEecCCchhHHHH---HHhCCcEEecCCccchhhHHHHHHhh-C-eeeeeeccCCCCCCHHHHHHHHHHH
Q 038300 287 KILGHPSIGGFVSHCGWSSVMES---MRLGVPIIAMPMHVDQPLNARLVEDV-G-IGLEVRRNKCGRIQREEMARVIKEV 361 (401)
Q Consensus 287 ~~l~~~~~~~~i~hgG~~s~~ea---l~~GvP~i~~P~~~dQ~~na~~~~~~-g-~g~~l~~~~~~~~~~~~l~~~i~~~ 361 (401)
++...+.+ +||-|.-.|...+ -.+|+|+|.+- .+|...-++..... | +-+.+ .....+++.+.+++=
T Consensus 262 el~~~~~l--vvTvGDDTT~vagdIl~RfgipiiGIt-DgD~D~~~~~~~~~~gsvi~~l-----~~~~DDdvGk~l~~~ 333 (367)
T COG4069 262 ELIEGAGL--VVTVGDDTTEVAGDILYRFGIPIIGIT-DGDCDEVTREVNIAPGSVILLL-----KPGRDDDVGKILEQE 333 (367)
T ss_pred HhhccCce--EEEEcCcchhHHHHHHHhcCCcEEecc-cCChHHhhhhcccCCCcEEEEE-----cCCcchHHHHHHHHH
Confidence 55555555 8988876655544 46899999985 45555555544444 2 33333 233557777777776
Q ss_pred hcCcccHHHHHHHHHHHHHHHhhc
Q 038300 362 VMEREGEKIKRKTREMGEKIKEKG 385 (401)
Q Consensus 362 l~~~~~~~~~~~a~~~~~~~~~~~ 385 (401)
+.......|.++..++++...+..
T Consensus 334 l~~~~~~~~~e~l~e~K~~v~~~~ 357 (367)
T COG4069 334 LFRGQYSAVFENLEEVKEKVITLA 357 (367)
T ss_pred HhcccchhHHHHHHHHHHHHHHHH
Confidence 643346788889888887776544
No 273
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=25.66 E-value=71 Score=29.10 Aligned_cols=39 Identities=21% Similarity=0.532 Sum_probs=32.2
Q ss_pred cCCchhHH--HHHHhCCcEEecCCccchhhHHHH-HHhhCee
Q 038300 300 HCGWSSVM--ESMRLGVPIIAMPMHVDQPLNARL-VEDVGIG 338 (401)
Q Consensus 300 hgG~~s~~--eal~~GvP~i~~P~~~dQ~~na~~-~~~~g~g 338 (401)
-||||+++ -|-.+||-++++-+...|..+|+. +...|.-
T Consensus 80 GCGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~ 121 (283)
T COG2230 80 GCGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLE 121 (283)
T ss_pred CCChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCC
Confidence 48998765 455669999999999999999987 6666888
No 274
>COG2987 HutU Urocanate hydratase [Amino acid transport and metabolism]
Probab=25.48 E-value=1.7e+02 Score=28.37 Aligned_cols=42 Identities=21% Similarity=0.204 Sum_probs=27.3
Q ss_pred eEEcccCchhhhcccCC--cceEEecCCchhHHHHHHhCCcEEe
Q 038300 277 MVIEGWAPQMKILGHPS--IGGFVSHCGWSSVMESMRLGVPIIA 318 (401)
Q Consensus 277 ~~~~~~~p~~~~l~~~~--~~~~i~hgG~~s~~eal~~GvP~i~ 318 (401)
=.+.+|.=+..+|..++ .=..+||||-=++-.+++.|.=+|+
T Consensus 465 davsDwp~lnallntA~GatwvslHhGGGvgmG~s~h~G~viVa 508 (561)
T COG2987 465 DAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHAGMVIVA 508 (561)
T ss_pred chhhhhHHHHHHhhhccCCcEEEEecCCcccccccccCceEEEe
Confidence 34567877777776543 1126899997777777777655544
No 275
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=25.45 E-value=2e+02 Score=28.65 Aligned_cols=54 Identities=11% Similarity=0.273 Sum_probs=38.1
Q ss_pred ccCCcceEEecCCchhHHHHHHh----CCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcC
Q 038300 290 GHPSIGGFVSHCGWSSVMESMRL----GVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVME 364 (401)
Q Consensus 290 ~~~~~~~~i~hgG~~s~~eal~~----GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~ 364 (401)
..+++ +|+=||=||++.++.. ++|++++-.. ..|.. ..++.+++.++|.+++.+
T Consensus 261 ~~~Dl--VIsiGGDGTlL~Aar~~~~~~iPILGIN~G-------------~LGFL------t~i~~~e~~~~Le~il~G 318 (508)
T PLN02935 261 TKVDL--VITLGGDGTVLWAASMFKGPVPPVVPFSMG-------------SLGFM------TPFHSEQYRDCLDAILKG 318 (508)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhccCCCcEEEEeCC-------------Cccee------cccCHHHHHHHHHHHHcC
Confidence 34566 9999999999999764 5677766321 13432 246788888999888863
No 276
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=25.22 E-value=97 Score=31.60 Aligned_cols=28 Identities=21% Similarity=0.376 Sum_probs=22.9
Q ss_pred CcceEEecCCc------hhHHHHHHhCCcEEecC
Q 038300 293 SIGGFVSHCGW------SSVMESMRLGVPIIAMP 320 (401)
Q Consensus 293 ~~~~~i~hgG~------~s~~eal~~GvP~i~~P 320 (401)
..++.++|.|- +++.+|...++|+|++.
T Consensus 63 ~~gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 63 KVGVCVATSGPGATNLVTGIATAYADSSPVIALT 96 (586)
T ss_pred CCEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 34558999884 48899999999999994
No 277
>PHA02698 hypothetical protein; Provisional
Probab=25.10 E-value=2.5e+02 Score=19.67 Aligned_cols=29 Identities=10% Similarity=0.211 Sum_probs=19.6
Q ss_pred CCCCHHHHHHHHHHHhcCcccHHHHHHHHHHH
Q 038300 347 GRIQREEMARVIKEVVMEREGEKIKRKTREMG 378 (401)
Q Consensus 347 ~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~ 378 (401)
.+.++|+....+.+.++ +-.|+....-++
T Consensus 39 ~~CsPEdMs~mLD~FLe---diq~ksElqLLs 67 (89)
T PHA02698 39 PQCSPEDMSDMLDNFLE---DIQYKSELQLLS 67 (89)
T ss_pred ccCCHHHHHHHHHHHHH---HHHHHHHHHHhh
Confidence 35788888888888887 555555544443
No 278
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=24.73 E-value=1e+02 Score=26.29 Aligned_cols=32 Identities=34% Similarity=0.403 Sum_probs=23.8
Q ss_pred CCCEEE-EcC-CCCcHHHHHHhcCCCeEEEeccc
Q 038300 78 SPDLLI-YDL-IQPWAPALASSLNIPAVYFLVSS 109 (401)
Q Consensus 78 ~pD~vI-~D~-~~~~~~~~A~~lgIP~v~~~~~~ 109 (401)
.||+|| .|+ --..+..-|.++|||.|++.-+.
T Consensus 127 ~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~Dtn 160 (193)
T cd01425 127 LPDLVIVLDPRKEHQAIREASKLGIPVIAIVDTN 160 (193)
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 589866 664 33445678899999999998764
No 279
>TIGR02418 acolac_catab acetolactate synthase, catabolic. Acetolactate synthase (EC 2.2.1.6) combines two molecules of pyruvate to yield 2-acetolactate with the release of CO2. This reaction may be involved in either valine biosynthesis (biosynthetic) or conversion of pyruvate to acetoin and possibly to 2,3-butanediol (catabolic). The biosynthetic type, described by TIGR00118, is also capable of forming acetohydroxybutyrate from pyruvate and 2-oxobutyrate for isoleucine biosynthesis. The family described here, part of the same larger family of thiamine pyrophosphate-dependent enzymes (pfam00205, pfam02776) is the catabolic form, generally found associated with in species with acetolactate decarboxylase and usually found in the same operon. The model may not encompass all catabolic acetolactate synthases, but rather one particular clade in the larger TPP-dependent enzyme family.
Probab=24.67 E-value=2.2e+02 Score=28.70 Aligned_cols=29 Identities=17% Similarity=0.195 Sum_probs=23.3
Q ss_pred CcceEEecCCc------hhHHHHHHhCCcEEecCC
Q 038300 293 SIGGFVSHCGW------SSVMESMRLGVPIIAMPM 321 (401)
Q Consensus 293 ~~~~~i~hgG~------~s~~eal~~GvP~i~~P~ 321 (401)
..+++++|.|- +++.+|...++|+|++--
T Consensus 61 ~~gv~~~t~GpG~~n~l~gl~~A~~~~~Pvl~I~G 95 (539)
T TIGR02418 61 KPGVALVTSGPGCSNLVTGLATANSEGDPVVAIGG 95 (539)
T ss_pred CceEEEECCCCCHhHHHHHHHHHhhcCCCEEEEeC
Confidence 34558999884 478899999999999953
No 280
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated
Probab=23.89 E-value=93 Score=31.56 Aligned_cols=28 Identities=11% Similarity=0.293 Sum_probs=23.2
Q ss_pred CcceEEecCCc------hhHHHHHHhCCcEEecC
Q 038300 293 SIGGFVSHCGW------SSVMESMRLGVPIIAMP 320 (401)
Q Consensus 293 ~~~~~i~hgG~------~s~~eal~~GvP~i~~P 320 (401)
.++++++|.|- +++.+|...++|+|++.
T Consensus 66 ~~gv~~~t~GpG~~n~~~gla~A~~~~~Pvl~i~ 99 (563)
T PRK08527 66 KVGVAIVTSGPGFTNAVTGLATAYMDSIPLVLIS 99 (563)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 45559999884 48899999999999994
No 281
>PRK08558 adenine phosphoribosyltransferase; Provisional
Probab=23.89 E-value=1e+02 Score=27.29 Aligned_cols=38 Identities=24% Similarity=0.166 Sum_probs=26.2
Q ss_pred HHHHHHhhcCCCEEEE-c-CCCCcHHHHHHhcCCCeEEEe
Q 038300 69 SFFNILKNLSPDLLIY-D-LIQPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~-D-~~~~~~~~~A~~lgIP~v~~~ 106 (401)
.+.+.+++..+|+|++ + --.+.+..+|..+|+|.+..-
T Consensus 102 ~la~~~~~~~~D~Vvtv~~~GI~lA~~lA~~L~~p~vi~R 141 (238)
T PRK08558 102 VVAERFMGLRVDVVLTAATDGIPLAVAIASYFGADLVYAK 141 (238)
T ss_pred HHHHHccCCCCCEEEEECcccHHHHHHHHHHHCcCEEEEE
Confidence 3444444557899883 2 344677889999999988753
No 282
>cd00529 RuvC_resolvase Holliday junction resolvases (HJRs) are endonucleases that specifically resolve Holliday junction DNA intermediates during homologous recombination. HJR's occur in archaea, bacteria, and in the mitochondria of certain fungi, however this CD includes only the bacterial and mitochondrial HJR's. These are referred to as the RuvC family of Holliday junction resolvases, RuvC being the E.coli HJR. RuvC and its orthologs are homodimers and are structurely similar to RNase H and Hsp70.
Probab=23.84 E-value=2.4e+02 Score=22.92 Aligned_cols=25 Identities=8% Similarity=0.299 Sum_probs=20.0
Q ss_pred HHhhchHHHHHHHhhcCCCEEEEcC
Q 038300 62 AFDMASPSFFNILKNLSPDLLIYDL 86 (401)
Q Consensus 62 ~~~~~~~~l~~~l~~~~pD~vI~D~ 86 (401)
....+...+.++++..+||.++.+-
T Consensus 43 rl~~I~~~l~~~i~~~~Pd~vaiE~ 67 (154)
T cd00529 43 RLKTIYDGLNEVIDQFQPDVVAIER 67 (154)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEE
Confidence 3444677899999999999998884
No 283
>PTZ00254 40S ribosomal protein SA; Provisional
Probab=23.72 E-value=1.1e+02 Score=27.30 Aligned_cols=32 Identities=34% Similarity=0.321 Sum_probs=23.6
Q ss_pred CCCEEE-EcCCC-CcHHHHHHhcCCCeEEEeccc
Q 038300 78 SPDLLI-YDLIQ-PWAPALASSLNIPAVYFLVSS 109 (401)
Q Consensus 78 ~pD~vI-~D~~~-~~~~~~A~~lgIP~v~~~~~~ 109 (401)
.||+|| +|+.. .-+..-|.++|||+|.+.-+.
T Consensus 118 ~P~llIV~Dp~~d~qAI~EA~~lnIPvIal~DTd 151 (249)
T PTZ00254 118 EPRLLIVTDPRTDHQAIREASYVNIPVIALCDTD 151 (249)
T ss_pred CCCEEEEeCCCcchHHHHHHHHhCCCEEEEecCC
Confidence 588755 78543 345678899999999998764
No 284
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=23.49 E-value=5.7e+02 Score=27.92 Aligned_cols=97 Identities=15% Similarity=0.110 Sum_probs=56.1
Q ss_pred Cchh---hhcccCCcceEEec---CCchhH-HHHHHhCC-----cEEecCCccchhhHHHHHHhhC-eeeeeeccCCCCC
Q 038300 283 APQM---KILGHPSIGGFVSH---CGWSSV-MESMRLGV-----PIIAMPMHVDQPLNARLVEDVG-IGLEVRRNKCGRI 349 (401)
Q Consensus 283 ~p~~---~~l~~~~~~~~i~h---gG~~s~-~eal~~Gv-----P~i~~P~~~dQ~~na~~~~~~g-~g~~l~~~~~~~~ 349 (401)
+|+. .++..+++ |+-- -|+|-+ .|+++++. +++ +-+.- ....+| -|+.+ ...
T Consensus 448 l~~eeL~AlY~~ADV--~lvTslrDGmNLva~Eyva~~~~~~GvLIL--SEfaG------aa~~L~~~AllV-----NP~ 512 (934)
T PLN03064 448 LDFHALCALYAVTDV--ALVTSLRDGMNLVSYEFVACQDSKKGVLIL--SEFAG------AAQSLGAGAILV-----NPW 512 (934)
T ss_pred CCHHHHHHHHHhCCE--EEeCccccccCchHHHHHHhhcCCCCCeEE--eCCCc------hHHHhCCceEEE-----CCC
Confidence 5544 67777888 6543 488754 59999954 333 32221 111223 46777 446
Q ss_pred CHHHHHHHHHHHhc-CcccHHHHHHHHHHHHHHHhhc-HHHHHHHHHHH
Q 038300 350 QREEMARVIKEVVM-EREGEKIKRKTREMGEKIKEKG-EEEIEWVADEL 396 (401)
Q Consensus 350 ~~~~l~~~i~~~l~-~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~ 396 (401)
+.+++.++|.+.|+ + .+.-+++.+++.+.+.... ..=+..++..+
T Consensus 513 D~~~vA~AI~~AL~M~--~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L 559 (934)
T PLN03064 513 NITEVAASIAQALNMP--EEEREKRHRHNFMHVTTHTAQEWAETFVSEL 559 (934)
T ss_pred CHHHHHHHHHHHHhCC--HHHHHHHHHHHHhhcccCCHHHHHHHHHHHH
Confidence 88999999999885 2 3444555556666555544 23344444444
No 285
>cd01148 TroA_a Metal binding protein TroA_a. These proteins are predicted to function as initial receptors in ABC transport of metal ions in eubacteria. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.
Probab=23.42 E-value=94 Score=28.02 Aligned_cols=38 Identities=21% Similarity=0.231 Sum_probs=25.0
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCc--H----HHHHHhcCCCeEEEe
Q 038300 68 PSFFNILKNLSPDLLIYDLIQPW--A----PALASSLNIPAVYFL 106 (401)
Q Consensus 68 ~~l~~~l~~~~pD~vI~D~~~~~--~----~~~A~~lgIP~v~~~ 106 (401)
+.++. |-+++||+||.+..... . ...-++.|+|++.+.
T Consensus 70 ~n~E~-I~~l~PDlIi~~~~~~~~~~~~~~~~~L~~~gipv~~~~ 113 (284)
T cd01148 70 PSKET-VLAARPDLVFGGWSYGFDKGGLGTPDSLAELGIKTYILP 113 (284)
T ss_pred CCHHH-HhcCCCCEEEEecccccCCCCCCCHHHHHHCCCeEEECc
Confidence 34444 44679999999753221 1 344567899998875
No 286
>PF04493 Endonuclease_5: Endonuclease V; InterPro: IPR007581 Endonuclease V is specific for single-stranded DNA, for duplex DNA that contains uracil, or that is damaged []. Matrix metalloproteinase-1 (MMP-1) is the major enzyme responsible for collagen 1 digestion. It is induced by exposure to sunlight, but is reduced with treatment of DNA repair enzyme endonuclease V []. This family consequently has potential medical importance []. This endonuclease also appears in bifunctional enzymes, such as the bifunctional methyltransferase/endonuclease in Thermoplasma acidophilum.; GO: 0004519 endonuclease activity, 0006281 DNA repair; PDB: 3GA2_A 2W36_A 3HD0_A 2W35_B 3GOC_B.
Probab=23.38 E-value=1.4e+02 Score=25.86 Aligned_cols=43 Identities=28% Similarity=0.384 Sum_probs=27.2
Q ss_pred hHHHHHHHhhc--CCCEEEEcCCCC-------cHHHHHHhcCCCeEEEeccc
Q 038300 67 SPSFFNILKNL--SPDLLIYDLIQP-------WAPALASSLNIPAVYFLVSS 109 (401)
Q Consensus 67 ~~~l~~~l~~~--~pD~vI~D~~~~-------~~~~~A~~lgIP~v~~~~~~ 109 (401)
.+.+.++++++ +||+|++|-... .+..++-.+++|.|...=..
T Consensus 76 ~P~~l~~l~~l~~~~dvilvDG~G~~HpR~~GlA~HlGv~l~iPtIGVAK~~ 127 (206)
T PF04493_consen 76 LPCILEALEKLKNKPDVILVDGHGILHPRRFGLASHLGVLLDIPTIGVAKSL 127 (206)
T ss_dssp HHHHHHHHHTSSS--SCEEEES-SSSSTTS--HHHHHHHHHTS-EEEEESS-
T ss_pred HHHHHHHHHHhcccCCEEEEeCceeecCCCcChhheeeeccCCCEEEEeCcc
Confidence 56677777766 589999994322 24456677799999987653
No 287
>cd01968 Nitrogenase_NifE_I Nitrogenase_NifE_I: a subgroup of the NifE subunit of the NifEN complex: NifE forms an alpha2beta2 tetramer with NifN. NifE and NifN are structurally homologous to nitrogenase MoFe protein alpha and beta subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The NifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this NifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco).
Probab=23.38 E-value=1.1e+02 Score=29.63 Aligned_cols=35 Identities=29% Similarity=0.285 Sum_probs=28.0
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEE
Q 038300 68 PSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYF 105 (401)
Q Consensus 68 ~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~ 105 (401)
..+.+.+++.+||++|.. .....+|+++|||++..
T Consensus 346 ~e~~~~i~~~~pDl~ig~---s~~~~~a~~~gip~~~~ 380 (410)
T cd01968 346 RELKKLLKEKKADLLVAG---GKERYLALKLGIPFCDI 380 (410)
T ss_pred HHHHHHHhhcCCCEEEEC---CcchhhHHhcCCCEEEc
Confidence 356677888899999987 34568999999999854
No 288
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=23.19 E-value=1.3e+02 Score=28.22 Aligned_cols=42 Identities=24% Similarity=0.271 Sum_probs=28.4
Q ss_pred hHHHHHHHhhcCCCEEEE--cCCCCcH-HHHH----------HhcCCCeEEEecc
Q 038300 67 SPSFFNILKNLSPDLLIY--DLIQPWA-PALA----------SSLNIPAVYFLVS 108 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~--D~~~~~~-~~~A----------~~lgIP~v~~~~~ 108 (401)
..-+.+.|+.++||+||. |..+... .+++ -..||||++++..
T Consensus 89 t~F~~rvL~sE~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP~I~~~IPwA~~lGN 143 (379)
T KOG1432|consen 89 TNFVSRVLASEKPDLVVFTGDNIFGHSTQDAATSLMKAVAPAIDRKIPWAAVLGN 143 (379)
T ss_pred HHHHHHHHhccCCCEEEEeCCcccccccHhHHHHHHHHhhhHhhcCCCeEEEecc
Confidence 446788889999999884 4443332 2222 4669999998754
No 289
>PRK03379 vitamin B12-transporter protein BtuF; Provisional
Probab=23.13 E-value=1.5e+02 Score=26.48 Aligned_cols=39 Identities=21% Similarity=0.149 Sum_probs=24.4
Q ss_pred HHHHHHHhhcCCCEEEEcCC-CC-cHHHHHHhcCCCeEEEec
Q 038300 68 PSFFNILKNLSPDLLIYDLI-QP-WAPALASSLNIPAVYFLV 107 (401)
Q Consensus 68 ~~l~~~l~~~~pD~vI~D~~-~~-~~~~~A~~lgIP~v~~~~ 107 (401)
+.++.+ -+++||+||.... .. -...--++.|||++.+.+
T Consensus 63 ~n~E~i-l~l~PDlVi~~~~~~~~~~~~~L~~~gi~v~~~~~ 103 (260)
T PRK03379 63 MNLERI-VALKPDLVLAWRGGNAERQVDQLASLGIKVMWVDA 103 (260)
T ss_pred CCHHHH-HhcCCCEEEEecCCCcHHHHHHHHHCCCCEEEeCC
Confidence 344444 4579999997532 11 122344678999999864
No 290
>PRK14477 bifunctional nitrogenase molybdenum-cofactor biosynthesis protein NifE/NifN; Provisional
Probab=22.71 E-value=1.1e+02 Score=33.26 Aligned_cols=38 Identities=16% Similarity=0.250 Sum_probs=30.2
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEec
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFLV 107 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~ 107 (401)
...+.+.+++.+||++|.. .-+..+|+++|||++-...
T Consensus 378 ~~el~~~i~~~~pDLlig~---~~~~~~a~k~giP~~~~~~ 415 (917)
T PRK14477 378 TAGLLRVMREKMPDLIVAG---GKTKFLALKTRTPFLDINH 415 (917)
T ss_pred HHHHHHHHHhcCCCEEEec---CchhhHHHHcCCCeEEccC
Confidence 4467778888899999985 3467899999999996553
No 291
>cd01971 Nitrogenase_VnfN_like Nitrogenase_vnfN_like: VnfN subunit of the VnfEN complex-like. This group in addition to VnfN contains a subset of the beta subunit of the nitrogenase MoFe protein and NifN-like proteins. The nitrogenase enzyme system catalyzes the ATP-dependent reduction of dinitrogen to ammonia. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of MoFe protein of the molybdenum(Mo)-nitrogenase. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to NifEN where it is further processed to FeMoco. VnfEN may similarly be a scaffolding protien for the iron-vanadium cofactor (FeVco) of the vanadium-dependent (V)-nitrogenase. NifE and NifN are essential for the Mo-nitrogenase, VnfE and VnfN are not essential for the V-nitrogenase. NifE and NifN can substitute when the vnfEN genes are inactivated.
Probab=22.68 E-value=1.4e+02 Score=29.16 Aligned_cols=35 Identities=17% Similarity=0.262 Sum_probs=27.6
Q ss_pred HHHHHHhhcC----CCEEEEcCCCCcHHHHHHhcCCCeEEEe
Q 038300 69 SFFNILKNLS----PDLLIYDLIQPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 69 ~l~~~l~~~~----pD~vI~D~~~~~~~~~A~~lgIP~v~~~ 106 (401)
.+++.+++.+ ||+||.. .++..+|+++|+|++.++
T Consensus 358 ~~~~~i~~~~~~~~~dliig~---s~~~~~a~~~~ip~i~~~ 396 (427)
T cd01971 358 AIGQSLRQSDFKYKPPIIFGS---SWERDLAKELGGKILEVS 396 (427)
T ss_pred HHHHHHHhCCCCCCCCEEEec---hHHHHHHHHcCCCeEEEe
Confidence 5666666664 9999977 457889999999998765
No 292
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=22.47 E-value=46 Score=27.77 Aligned_cols=29 Identities=21% Similarity=0.579 Sum_probs=21.8
Q ss_pred CCcceEEecCCchhHH--HHHHhCCcEEecCCc
Q 038300 292 PSIGGFVSHCGWSSVM--ESMRLGVPIIAMPMH 322 (401)
Q Consensus 292 ~~~~~~i~hgG~~s~~--eal~~GvP~i~~P~~ 322 (401)
||+ +|.|.|||..+ --+.=.+|+|+..-+
T Consensus 67 PDv--I~~H~GWGe~Lflkdv~P~a~li~Y~E~ 97 (171)
T PF12000_consen 67 PDV--IIAHPGWGETLFLKDVFPDAPLIGYFEF 97 (171)
T ss_pred CCE--EEEcCCcchhhhHHHhCCCCcEEEEEEE
Confidence 667 99999999654 335568999988754
No 293
>TIGR01282 nifD nitrogenase molybdenum-iron protein alpha chain. Nitrogenase consists of alpha (NifD) and beta (NifK) subunits of the molybdenum-iron protein and an ATP-binding iron-sulfur protein (NifH). This model describes a large clade of NifD proteins, but excludes a lineage that contains putative NifD and NifD homologs from species with vanadium-dependent nitrogenases.
Probab=22.46 E-value=58 Score=32.17 Aligned_cols=36 Identities=17% Similarity=0.268 Sum_probs=29.0
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEE
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYF 105 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~ 105 (401)
...+.+++++.+||++|.... +..+|+++|||++-+
T Consensus 393 ~~el~~~i~~~~pDl~ig~~~---~~~~a~k~gIP~~~~ 428 (466)
T TIGR01282 393 HYEFEEFVEKLKPDLVGSGIK---EKYVFQKMGVPFRQM 428 (466)
T ss_pred HHHHHHHHHHhCCCEEEecCC---ccceeeecCCCcccc
Confidence 346778888899999998754 578999999999544
No 294
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated
Probab=22.45 E-value=1.1e+02 Score=31.06 Aligned_cols=28 Identities=11% Similarity=0.324 Sum_probs=23.0
Q ss_pred CcceEEecCCch------hHHHHHHhCCcEEecC
Q 038300 293 SIGGFVSHCGWS------SVMESMRLGVPIIAMP 320 (401)
Q Consensus 293 ~~~~~i~hgG~~------s~~eal~~GvP~i~~P 320 (401)
.++++++|.|-| ++.+|...++|+|++.
T Consensus 67 ~~gv~~~t~GpG~~n~l~gia~A~~~~~Pvl~i~ 100 (572)
T PRK08979 67 KVGVVLVTSGPGATNTITGIATAYMDSIPMVVLS 100 (572)
T ss_pred CCeEEEECCCchHhHHHHHHHHHhhcCCCEEEEe
Confidence 455589998844 7889999999999995
No 295
>PRK05299 rpsB 30S ribosomal protein S2; Provisional
Probab=22.31 E-value=1.1e+02 Score=27.62 Aligned_cols=33 Identities=30% Similarity=0.316 Sum_probs=24.3
Q ss_pred CCCEEE-EcCC-CCcHHHHHHhcCCCeEEEeccch
Q 038300 78 SPDLLI-YDLI-QPWAPALASSLNIPAVYFLVSSA 110 (401)
Q Consensus 78 ~pD~vI-~D~~-~~~~~~~A~~lgIP~v~~~~~~~ 110 (401)
.||+|| .|+- -..+..-|.++|||.|++.-+.+
T Consensus 157 ~Pd~iii~d~~~~~~ai~Ea~kl~IPiIaivDTn~ 191 (258)
T PRK05299 157 LPDALFVVDPNKEHIAVKEARKLGIPVVAIVDTNC 191 (258)
T ss_pred CCCEEEEeCCCccHHHHHHHHHhCCCEEEEeeCCC
Confidence 489766 6743 33467788999999999977643
No 296
>COG2086 FixA Electron transfer flavoprotein, beta subunit [Energy production and conversion]
Probab=22.28 E-value=1.5e+02 Score=26.71 Aligned_cols=42 Identities=24% Similarity=0.389 Sum_probs=31.8
Q ss_pred hHHHHHHHhhcCCCEEEEc------CCCCcHHHHHHhcCCCeEEEecc
Q 038300 67 SPSFFNILKNLSPDLLIYD------LIQPWAPALASSLNIPAVYFLVS 108 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D------~~~~~~~~~A~~lgIP~v~~~~~ 108 (401)
...+.+.++...+|+|++- ...--+..+|+.||+|.+.+..-
T Consensus 100 a~~Laa~~~~~~~~LVl~G~qa~D~~t~qvg~~lAe~Lg~P~~t~v~~ 147 (260)
T COG2086 100 AKALAAAVKKIGPDLVLTGKQAIDGDTGQVGPLLAELLGWPQVTYVSK 147 (260)
T ss_pred HHHHHHHHHhcCCCEEEEecccccCCccchHHHHHHHhCCceeeeEEE
Confidence 4457777888899999853 33345789999999999988653
No 297
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=22.15 E-value=1.9e+02 Score=27.06 Aligned_cols=84 Identities=18% Similarity=0.262 Sum_probs=48.7
Q ss_pred CCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcc--cCchh-hhcccCCcceEEecCC
Q 038300 226 FLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEG--WAPQM-KILGHPSIGGFVSHCG 302 (401)
Q Consensus 226 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~-~~l~~~~~~~~i~hgG 302 (401)
..+.+.+.++++.|.+.+.++++. ++. .. .+.-+.+.+.... .+.+.+ -+.+. .+++++++ ||+. -
T Consensus 191 ~wp~e~~~~l~~~l~~~~~~Vvl~-g~~--~e----~e~~~~i~~~~~~-~~~l~~k~sL~e~~~li~~a~l--~I~~-D 259 (334)
T COG0859 191 RWPLEHYAELAELLIAKGYQVVLF-GGP--DE----EERAEEIAKGLPN-AVILAGKTSLEELAALIAGADL--VIGN-D 259 (334)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEe-cCh--HH----HHHHHHHHHhcCC-ccccCCCCCHHHHHHHHhcCCE--EEcc-C
Confidence 345678889999998888665544 332 10 0011111111111 111222 23444 78888888 8874 3
Q ss_pred chhHHHHHHhCCcEEecC
Q 038300 303 WSSVMESMRLGVPIIAMP 320 (401)
Q Consensus 303 ~~s~~eal~~GvP~i~~P 320 (401)
.|-+.=|.+.|+|.|++=
T Consensus 260 Sg~~HlAaA~~~P~I~iy 277 (334)
T COG0859 260 SGPMHLAAALGTPTIALY 277 (334)
T ss_pred ChHHHHHHHcCCCEEEEE
Confidence 567888899999999873
No 298
>PF14565 IL22: Interleukin 22 IL-10-related T-cell-derived-inducible factor; PDB: 1M4R_A 1YKB_F 3G9V_D 3DGC_M 3Q1S_I 3DLQ_I.
Probab=22.11 E-value=2.6e+02 Score=22.42 Aligned_cols=33 Identities=27% Similarity=0.392 Sum_probs=25.3
Q ss_pred cHHHHHHHHHHHHHHHhhcHHHHHHHHHHHHhh
Q 038300 367 GEKIKRKTREMGEKIKEKGEEEIEWVADELIHL 399 (401)
Q Consensus 367 ~~~~~~~a~~~~~~~~~~~~~~~~~~v~~~~~~ 399 (401)
+...++++.+++..+.+.|.+...+.|.||.-+
T Consensus 99 ~~hi~rn~~~lk~~~kkLGe~g~~KAIGELDlL 131 (139)
T PF14565_consen 99 DQHIQRNVEQLKDKVKKLGESGKNKAIGELDLL 131 (139)
T ss_dssp SHHHHHHHHHHHHHHHHTHHHHHHHHHHTHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 567889999999999887766677777666543
No 299
>PRK09213 pur operon repressor; Provisional
Probab=22.09 E-value=1.4e+02 Score=27.03 Aligned_cols=39 Identities=23% Similarity=0.198 Sum_probs=27.5
Q ss_pred HHHHHHhhcCCCEEEE-c-CCCCcHHHHHHhcCCCeEEEec
Q 038300 69 SFFNILKNLSPDLLIY-D-LIQPWAPALASSLNIPAVYFLV 107 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~-D-~~~~~~~~~A~~lgIP~v~~~~ 107 (401)
.+.+.+.+.++|+|++ + --.+.+..+|..+|+|++..--
T Consensus 121 ~la~~~~~~~iD~Vvtvet~GIplA~~vA~~L~vp~vivRK 161 (271)
T PRK09213 121 IIASAFADKKIDAVMTVETKGIPLAYAVANYLNVPFVIVRR 161 (271)
T ss_pred HHHHHhcccCCCEEEEEccccHHHHHHHHHHHCCCEEEEEE
Confidence 3444445567899884 3 3446677899999999988755
No 300
>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type. This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.
Probab=22.05 E-value=1.4e+02 Score=27.00 Aligned_cols=39 Identities=26% Similarity=0.233 Sum_probs=27.6
Q ss_pred HHHHHHhhcCCCEEEE-c-CCCCcHHHHHHhcCCCeEEEec
Q 038300 69 SFFNILKNLSPDLLIY-D-LIQPWAPALASSLNIPAVYFLV 107 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~-D-~~~~~~~~~A~~lgIP~v~~~~ 107 (401)
.+.+.+++.++|+|++ + --.+.+..+|..+|+|.+..--
T Consensus 119 ~la~~~~~~~iD~VvgvetkGIpLA~avA~~L~vp~vivRK 159 (268)
T TIGR01743 119 ILASVFAEREIDAVMTVATKGIPLAYAVASVLNVPLVIVRK 159 (268)
T ss_pred HHHHHhcCCCCCEEEEEccchHHHHHHHHHHHCCCEEEEEE
Confidence 3444445557899984 3 3446677899999999988754
No 301
>PLN02470 acetolactate synthase
Probab=21.91 E-value=97 Score=31.61 Aligned_cols=29 Identities=17% Similarity=0.374 Sum_probs=24.0
Q ss_pred CcceEEecCCch------hHHHHHHhCCcEEecCC
Q 038300 293 SIGGFVSHCGWS------SVMESMRLGVPIIAMPM 321 (401)
Q Consensus 293 ~~~~~i~hgG~~------s~~eal~~GvP~i~~P~ 321 (401)
.++++++|.|-| ++.+|...++|+|++.-
T Consensus 76 ~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~G 110 (585)
T PLN02470 76 KVGVCIATSGPGATNLVTGLADALLDSVPLVAITG 110 (585)
T ss_pred CCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEec
Confidence 466699999854 78899999999999953
No 302
>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function. Some members of this family are annotated as being potential phospholipases but no literature was found to support this.
Probab=21.83 E-value=99 Score=28.11 Aligned_cols=43 Identities=9% Similarity=0.108 Sum_probs=29.4
Q ss_pred chHHHHHHHhhc-CCCEEEEcCCCCc-----HHHHHHhcCCCeEEEecc
Q 038300 66 ASPSFFNILKNL-SPDLLIYDLIQPW-----APALASSLNIPAVYFLVS 108 (401)
Q Consensus 66 ~~~~l~~~l~~~-~pD~vI~D~~~~~-----~~~~A~~lgIP~v~~~~~ 108 (401)
+.+.+++.|++- +.-+||.|.|+-. ...+|.+.+||++++.-.
T Consensus 135 IKE~vR~~I~~A~kVIAIVMD~FTD~dIf~DLleAa~kR~VpVYiLLD~ 183 (284)
T PF07894_consen 135 IKEVVRRMIQQAQKVIAIVMDVFTDVDIFCDLLEAANKRGVPVYILLDE 183 (284)
T ss_pred HHHHHHHHHHHhcceeEEEeeccccHHHHHHHHHHHHhcCCcEEEEech
Confidence 344445555443 6788999988654 346777999999998654
No 303
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=21.70 E-value=1.8e+02 Score=25.66 Aligned_cols=41 Identities=20% Similarity=0.229 Sum_probs=26.6
Q ss_pred HHHHHHhhcCCCEEEEcC--CCCcHHHHH----HhcCCCeEEEeccc
Q 038300 69 SFFNILKNLSPDLLIYDL--IQPWAPALA----SSLNIPAVYFLVSS 109 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~--~~~~~~~~A----~~lgIP~v~~~~~~ 109 (401)
.....+++++||++|+=. -...|..-| ..-|||+|+++-.+
T Consensus 51 ~~~~~~~~~~pDf~i~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~p 97 (277)
T PRK00994 51 VVKKMLEEWKPDFVIVISPNPAAPGPKKAREILKAAGIPCIVIGDAP 97 (277)
T ss_pred HHHHHHHhhCCCEEEEECCCCCCCCchHHHHHHHhcCCCEEEEcCCC
Confidence 455667889999877542 222334444 34499999997764
No 304
>TIGR01861 ANFD nitrogenase iron-iron protein, alpha chain. This model represents the all-iron variant of the nitrogenase component I alpha chain. Molybdenum-iron and vanadium iron forms are also found. The complete complex contains two alpha chains, two beta chains and two delta chains. The component I associates with component II also known as the iron protein which serves to provide electrons for component I.
Probab=21.62 E-value=1.1e+02 Score=30.61 Aligned_cols=31 Identities=13% Similarity=0.344 Sum_probs=24.6
Q ss_pred HHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEE
Q 038300 72 NILKNLSPDLLIYDLIQPWAPALASSLNIPAVYF 105 (401)
Q Consensus 72 ~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~ 105 (401)
+.+++.+||++|.... +..+|+++|||++-.
T Consensus 392 ~~l~~~~~Dllig~s~---~~~~A~k~gIP~ld~ 422 (513)
T TIGR01861 392 EAMEMLKPDIILTGKR---PGEVSKKMRVPYLNA 422 (513)
T ss_pred HHHHhcCCCEEEecCc---cchhHhhcCCCEEEc
Confidence 4567789999998754 458999999999654
No 305
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=21.60 E-value=1.3e+02 Score=26.87 Aligned_cols=26 Identities=35% Similarity=0.488 Sum_probs=21.0
Q ss_pred EEecCC-chhHHHHHHhCCcEEecCCc
Q 038300 297 FVSHCG-WSSVMESMRLGVPIIAMPMH 322 (401)
Q Consensus 297 ~i~hgG-~~s~~eal~~GvP~i~~P~~ 322 (401)
.|+++| -+..+||..+|+|.|++-+.
T Consensus 103 ~v~ySGTVgAA~ea~~~GipaiA~S~~ 129 (244)
T TIGR00087 103 DVTYSGTVGAAMEAAIHGVPAIAISLQ 129 (244)
T ss_pred cEecchhHHHHHHHHHcCCCeEEEEec
Confidence 445555 77889999999999999873
No 306
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=21.36 E-value=1.9e+02 Score=29.45 Aligned_cols=51 Identities=24% Similarity=0.467 Sum_probs=37.4
Q ss_pred ceEEecCCchhHHHHHHh----CCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcC
Q 038300 295 GGFVSHCGWSSVMESMRL----GVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVME 364 (401)
Q Consensus 295 ~~~i~hgG~~s~~eal~~----GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~ 364 (401)
.++|+-||=||+..+... ++|++++-... .|.. -+++.+++.+++++++++
T Consensus 350 dlvi~lGGDGT~L~aa~~~~~~~~PilGin~G~-------------lGFL------~~~~~~~~~~~l~~~~~g 404 (569)
T PRK14076 350 SHIISIGGDGTVLRASKLVNGEEIPIICINMGT-------------VGFL------TEFSKEEIFKAIDSIISG 404 (569)
T ss_pred CEEEEECCcHHHHHHHHHhcCCCCCEEEEcCCC-------------CCcC------cccCHHHHHHHHHHHHcC
Confidence 349999999999999764 77888876522 3322 246778888888888863
No 307
>cd01149 HutB Hemin binding protein HutB. These proteins have been shown to function as initial receptors in ABC transport of hemin and hemoproteins in many eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.
Probab=21.35 E-value=1.6e+02 Score=25.68 Aligned_cols=35 Identities=17% Similarity=0.082 Sum_probs=22.8
Q ss_pred HHHhhcCCCEEEEcCCCCcH--HHHHHhcCCCeEEEe
Q 038300 72 NILKNLSPDLLIYDLIQPWA--PALASSLNIPAVYFL 106 (401)
Q Consensus 72 ~~l~~~~pD~vI~D~~~~~~--~~~A~~lgIP~v~~~ 106 (401)
+.|.+.+||+||........ ...-++.|||++.+.
T Consensus 52 E~i~~l~PDlIi~~~~~~~~~~~~~l~~~gipvv~~~ 88 (235)
T cd01149 52 EGVLSLKPTLVIASDEAGPPEALDQLRAAGVPVVTVP 88 (235)
T ss_pred HHhhccCCCEEEEcCCCCCHHHHHHHHHcCCeEEEec
Confidence 44556799999986432222 233367899998875
No 308
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=21.35 E-value=4.1e+02 Score=24.09 Aligned_cols=73 Identities=16% Similarity=0.317 Sum_probs=46.3
Q ss_pred HHHHHHhCCCceEEeecCCCCCCCcccccCchhHHH----hhcCCceEE-----cccCchhhhcccCCcceEEecCC-ch
Q 038300 235 IALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLE----RTKERAMVI-----EGWAPQMKILGHPSIGGFVSHCG-WS 304 (401)
Q Consensus 235 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-----~~~~p~~~~l~~~~~~~~i~hgG-~~ 304 (401)
+.+.|++.|.+|+.+.... -|+..+. .+.....++ .++-|..++|+.++. +|+-.. -|
T Consensus 189 l~k~l~~~g~~~lisfSRR----------Tp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Ady--ii~TaDSin 256 (329)
T COG3660 189 LVKILENQGGSFLISFSRR----------TPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADY--IISTADSIN 256 (329)
T ss_pred HHHHHHhCCceEEEEeecC----------CcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcce--EEEecchhh
Confidence 4467788888888876542 2222221 111111222 145688899988887 877665 56
Q ss_pred hHHHHHHhCCcEEec
Q 038300 305 SVMESMRLGVPIIAM 319 (401)
Q Consensus 305 s~~eal~~GvP~i~~ 319 (401)
-.+||++.|+|+-+.
T Consensus 257 M~sEAasTgkPv~~~ 271 (329)
T COG3660 257 MCSEAASTGKPVFIL 271 (329)
T ss_pred hhHHHhccCCCeEEE
Confidence 778999999998653
No 309
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=21.21 E-value=1.1e+02 Score=27.42 Aligned_cols=25 Identities=36% Similarity=0.432 Sum_probs=20.3
Q ss_pred EEecCC-chhHHHHHHhCCcEEecCC
Q 038300 297 FVSHCG-WSSVMESMRLGVPIIAMPM 321 (401)
Q Consensus 297 ~i~hgG-~~s~~eal~~GvP~i~~P~ 321 (401)
-|.++| .+..+||..+|+|.|.+.+
T Consensus 103 ~v~ySGTVgAA~ea~~~GiPaiA~S~ 128 (253)
T PRK13935 103 DVLYSGTVSGALEGAMMGVPSIAISS 128 (253)
T ss_pred CCcccHhHHHHHHHHhcCCCeEEEEc
Confidence 344555 6788999999999999987
No 310
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=21.21 E-value=1e+02 Score=28.35 Aligned_cols=38 Identities=29% Similarity=0.433 Sum_probs=29.9
Q ss_pred hhcccCCcceEEecCCchhHHHHHH----hCCcEEecCCccc
Q 038300 287 KILGHPSIGGFVSHCGWSSVMESMR----LGVPIIAMPMHVD 324 (401)
Q Consensus 287 ~~l~~~~~~~~i~hgG~~s~~eal~----~GvP~i~~P~~~d 324 (401)
+.|..-++.++|.=||-+|..-|.. .++|+|++|-.-|
T Consensus 85 ~~l~~~~Id~Li~IGGdgs~~~a~~L~e~~~i~vigiPkTID 126 (301)
T TIGR02482 85 ENLKKLGIEGLVVIGGDGSYTGAQKLYEEGGIPVIGLPGTID 126 (301)
T ss_pred HHHHHcCCCEEEEeCCchHHHHHHHHHHhhCCCEEeeccccc
Confidence 4566677888999999998866643 7999999998544
No 311
>cd01973 Nitrogenase_VFe_beta_like Nitrogenase_VFe_beta -like: Nitrogenase VFe protein, beta subunit like. This group contains proteins similar to the beta subunits of the VFe protein of the vanadium-dependent (V-) nitrogenase. Nitrogenase catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. In addition to V-nitrogenase there is a molybdenum (Mo)-dependent nitrogenase and an iron only (Fe-) nitrogenase. The Mo-nitrogenase is the most widespread and best characterized of these systems. These systems consist of component 1 (VFe protein, FeFe protein or, MoFe protein respectively) and, component 2 (Fe protein). MoFe is an alpha2beta2 tetramer, V-and Fe- nitrogenases are alpha2beta2delta2 hexamers. The alpha and beta subunits of VFe and FeFe are similar to the alpha and beta subunits of MoFe. For MoFe each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe p
Probab=21.06 E-value=1.6e+02 Score=29.07 Aligned_cols=37 Identities=27% Similarity=0.152 Sum_probs=28.5
Q ss_pred hHHHHHHHhh--cCCCEEEEcCCCCcHHHHHHhcCCCeEEEe
Q 038300 67 SPSFFNILKN--LSPDLLIYDLIQPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 67 ~~~l~~~l~~--~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~ 106 (401)
...+++.+++ .+||++|... .+..+|+++|||++...
T Consensus 368 ~~e~~~~i~~~~~~~dliig~s---~~~~~A~~~gip~~~~g 406 (454)
T cd01973 368 LWELEKRIKNKGLELDLILGHS---KGRYIAIDNNIPMVRVG 406 (454)
T ss_pred HHHHHHHHHhcCCCCCEEEECC---ccHHHHHHcCCCEEEec
Confidence 3456667766 4699999774 57899999999998763
No 312
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=21.05 E-value=1.7e+02 Score=28.06 Aligned_cols=37 Identities=14% Similarity=0.018 Sum_probs=25.8
Q ss_pred HHHHHhhc--CCCEEEEcCCCCcHHHHHHhcCCCeEEEec
Q 038300 70 FFNILKNL--SPDLLIYDLIQPWAPALASSLNIPAVYFLV 107 (401)
Q Consensus 70 l~~~l~~~--~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~ 107 (401)
-..++++. +||+||.=--+. ...+|...|+|++.+.+
T Consensus 83 ~~~~~~~~~~~p~~v~~~Gg~v-~~~aA~~~~~p~~~~~~ 121 (396)
T TIGR03492 83 QWRALRKWAKKGDLIVAVGDIV-PLLFAWLSGKPYAFVGT 121 (396)
T ss_pred HHHHHHHHhhcCCEEEEECcHH-HHHHHHHcCCCceEEEe
Confidence 34456667 899988532112 67788888999999765
No 313
>cd00316 Oxidoreductase_nitrogenase The nitrogenase enzyme system catalyzes the ATP-dependent reduction of dinitrogen to ammonia. This group contains both alpha and beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase) and, both subunits of Protochlorophyllide (Pchlide) reductase and chlorophyllide (chlide) reductase. The nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized nitrogenase is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers whose alpha and beta subunits are similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molec
Probab=20.93 E-value=1.5e+02 Score=28.32 Aligned_cols=38 Identities=26% Similarity=0.347 Sum_probs=29.7
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEec
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFLV 107 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~ 107 (401)
...+.+.+++.+||++|.+. .....++++|||++.+..
T Consensus 337 ~~~~~~~~~~~~pdl~ig~~---~~~~~~~~~~ip~~~~~~ 374 (399)
T cd00316 337 LEELEELIRELKPDLIIGGS---KGRYIAKKLGIPLVRIGF 374 (399)
T ss_pred HHHHHHHHhhcCCCEEEECC---cHHHHHHHhCCCEEEcCC
Confidence 45667777888999999885 467889999999976543
No 314
>cd01139 TroA_f Periplasmic binding protein TroA_f. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=20.75 E-value=1.5e+02 Score=27.56 Aligned_cols=35 Identities=23% Similarity=0.309 Sum_probs=22.6
Q ss_pred HHhhcCCCEEEEcCCCC------cHHHHHHhcCCCeEEEec
Q 038300 73 ILKNLSPDLLIYDLIQP------WAPALASSLNIPAVYFLV 107 (401)
Q Consensus 73 ~l~~~~pD~vI~D~~~~------~~~~~A~~lgIP~v~~~~ 107 (401)
.|.+++||+||...... .....-+++|||++.+..
T Consensus 86 ~l~~l~PDLIi~~~~~~~~~~~~~~~~~l~~~gipvv~~~~ 126 (342)
T cd01139 86 KVLTLKPDLVILNIWAKTTAEESGILEKLEQAGIPVVFVDF 126 (342)
T ss_pred HHhhcCCCEEEEeccccccchhhHHHHHHHHcCCcEEEEeC
Confidence 34457999999764321 122344677999998753
No 315
>PRK08322 acetolactate synthase; Reviewed
Probab=20.74 E-value=1.3e+02 Score=30.33 Aligned_cols=28 Identities=25% Similarity=0.328 Sum_probs=23.1
Q ss_pred CcceEEecCCc------hhHHHHHHhCCcEEecC
Q 038300 293 SIGGFVSHCGW------SSVMESMRLGVPIIAMP 320 (401)
Q Consensus 293 ~~~~~i~hgG~------~s~~eal~~GvP~i~~P 320 (401)
..+++++|.|- +++.+|...++|+|++.
T Consensus 63 ~~gv~~~t~GpG~~N~~~~i~~A~~~~~Pll~i~ 96 (547)
T PRK08322 63 KAGVCLSTLGPGATNLVTGVAYAQLGGMPMVAIT 96 (547)
T ss_pred CCEEEEECCCccHhHHHHHHHHHhhcCCCEEEEe
Confidence 45558999884 48899999999999995
No 316
>cd01972 Nitrogenase_VnfE_like Nitrogenase_VnfE_like: VnfE subunit of the VnfEN complex_like. This group in addition to VnfE contains a subset of the alpha subunit of the nitrogenase MoFe protein and NifE-like proteins. The nitrogenase enzyme system catalyzes the ATP-dependent reduction of dinitrogen to ammonia. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of MoFe protein of the molybdenum(Mo)-nitrogenase. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to NifEN where it is further processed to FeMoco. VnfEN may similarly be a scaffolding protein for the iron-vanadium cofactor (FeVco) of the vanadium-dependent (V)-nitrogenase. NifE and NifN are essential for the Mo-nitrogenase, VnfE and VnfN are not essential for the V-nitrogenase. NifE and NifN can substitute when the vnfEN genes are inactivated.
Probab=20.68 E-value=1.4e+02 Score=29.01 Aligned_cols=38 Identities=32% Similarity=0.521 Sum_probs=29.0
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEe
Q 038300 68 PSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 68 ~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~ 106 (401)
..+.+++++.+||++|.-.- .+....+.++|+|++.+.
T Consensus 363 ~e~~~~l~~~~pDl~i~~~~-~~~~~~~~~~gip~~~~~ 400 (426)
T cd01972 363 YQFYNLLKRVKPDFIIFRHG-GLFPDATVYLGIPVVPLN 400 (426)
T ss_pred HHHHHHHHHhCCCEEEEcCC-CccHHHHHhcCCCEEecc
Confidence 46888899999999986432 345567788999998774
No 317
>PRK06456 acetolactate synthase catalytic subunit; Reviewed
Probab=20.62 E-value=1.2e+02 Score=30.87 Aligned_cols=28 Identities=18% Similarity=0.262 Sum_probs=22.6
Q ss_pred CcceEEecCCc------hhHHHHHHhCCcEEecC
Q 038300 293 SIGGFVSHCGW------SSVMESMRLGVPIIAMP 320 (401)
Q Consensus 293 ~~~~~i~hgG~------~s~~eal~~GvP~i~~P 320 (401)
..+++++|.|- +++.+|...++|+|++.
T Consensus 68 ~~gv~~~t~GpG~~N~l~gi~~A~~~~~Pvl~i~ 101 (572)
T PRK06456 68 VPGVCTATSGPGTTNLVTGLITAYWDSSPVIAIT 101 (572)
T ss_pred CCEEEEeCCCCCHHHHHHHHHHHHhhCCCEEEEe
Confidence 34458888884 47799999999999996
No 318
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This represents the N-terminal TPP binding domain of TPP enzymes.; GO: 0030976 thiamine pyrophosphate binding; PDB: 3HWX_1 3FLM_B 3HWW_A 2JLC_A 2JLA_A 2VBG_A 2VBF_B 2Q29_A 2Q27_B 2Q28_B ....
Probab=20.55 E-value=2.7e+02 Score=22.91 Aligned_cols=29 Identities=10% Similarity=0.271 Sum_probs=22.0
Q ss_pred CcceEEecCC------chhHHHHHHhCCcEEecCC
Q 038300 293 SIGGFVSHCG------WSSVMESMRLGVPIIAMPM 321 (401)
Q Consensus 293 ~~~~~i~hgG------~~s~~eal~~GvP~i~~P~ 321 (401)
..+++++|.| .+++.+|...++|+|++.-
T Consensus 64 ~~~v~~~~~GpG~~n~~~~l~~A~~~~~Pvl~i~g 98 (172)
T PF02776_consen 64 RPGVVIVTSGPGATNALTGLANAYADRIPVLVITG 98 (172)
T ss_dssp SEEEEEEETTHHHHTTHHHHHHHHHTT-EEEEEEE
T ss_pred cceEEEeecccchHHHHHHHhhcccceeeEEEEec
Confidence 3444888887 4578889999999999875
No 319
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=20.46 E-value=1.8e+02 Score=26.10 Aligned_cols=38 Identities=37% Similarity=0.580 Sum_probs=0.0
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCCcH-------HHHHHhcCCCeEEE
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQPWA-------PALASSLNIPAVYF 105 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~~~-------~~~A~~lgIP~v~~ 105 (401)
...+.+++++.++|+|| |...+.+ ..+|+++|||++-+
T Consensus 54 ~~~l~~~l~~~~i~~VI-DAtHPfA~~is~~a~~a~~~~~ipylR~ 98 (256)
T TIGR00715 54 PQELREFLKRHSIDILV-DATHPFAAQITTNATAVCKELGIPYVRF 98 (256)
T ss_pred HHHHHHHHHhcCCCEEE-EcCCHHHHHHHHHHHHHHHHhCCcEEEE
No 320
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=20.33 E-value=2.2e+02 Score=23.43 Aligned_cols=43 Identities=16% Similarity=0.321 Sum_probs=30.9
Q ss_pred chHHHHHHHhhcCCCEEEEcCC---CCcHHHHHHhcCCCeEEEecc
Q 038300 66 ASPSFFNILKNLSPDLLIYDLI---QPWAPALASSLNIPAVYFLVS 108 (401)
Q Consensus 66 ~~~~l~~~l~~~~pD~vI~D~~---~~~~~~~A~~lgIP~v~~~~~ 108 (401)
....+.+++++.+||+|+.-.- -..+..+|.+||.|.++-...
T Consensus 71 ~a~al~~~i~~~~p~~Vl~~~t~~g~~la~rlAa~L~~~~vtdv~~ 116 (168)
T cd01715 71 YAPALVALAKKEKPSHILAGATSFGKDLAPRVAAKLDVGLISDVTA 116 (168)
T ss_pred HHHHHHHHHHhcCCCEEEECCCccccchHHHHHHHhCCCceeeEEE
Confidence 3455677777788999996532 234667889999999886654
No 321
>TIGR03394 indol_phenyl_DC indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family. A family of closely related, thiamine pyrophosphate-dependent enzymes includes indolepyruvate decarboxylase (EC 4.1.1.74), phenylpyruvate decarboxylase (EC 4.1.1.43), pyruvate decarboxylase (EC 4.1.1.1), branched-chain alpha-ketoacid decarboxylase, etc.. Members of this group of homologs may overlap in specificity. This model represents a clade that includes a Azospirillum brasilense member active as both phenylpyruvate decarboxylase and indolepyruvate decarboxylase.
Probab=20.11 E-value=7.5e+02 Score=24.87 Aligned_cols=27 Identities=11% Similarity=0.260 Sum_probs=22.0
Q ss_pred cceEEecCCc------hhHHHHHHhCCcEEecC
Q 038300 294 IGGFVSHCGW------SSVMESMRLGVPIIAMP 320 (401)
Q Consensus 294 ~~~~i~hgG~------~s~~eal~~GvP~i~~P 320 (401)
.+++++|+|- +++.+|...++|+|++.
T Consensus 64 ~gv~~~t~GpG~~n~~~gia~A~~~~~Pvl~i~ 96 (535)
T TIGR03394 64 LGVAAVTYGAGAFNMVNAIAGAYAEKSPVVVIS 96 (535)
T ss_pred ceEEEEecchHHHhhhhHHHHHhhcCCCEEEEE
Confidence 4448888884 47889999999999995
No 322
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=20.10 E-value=2.2e+02 Score=25.46 Aligned_cols=40 Identities=28% Similarity=0.409 Sum_probs=30.3
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCCcH-------HHHHHhcCCCeEEEec
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQPWA-------PALASSLNIPAVYFLV 107 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~~~-------~~~A~~lgIP~v~~~~ 107 (401)
.+.+.+++++.+.++|| |---|++ ..+|+++|||++-|--
T Consensus 54 ~~~l~~~l~~~~i~~VI-DATHPfA~~is~~a~~ac~~~~ipyiR~eR 100 (248)
T PRK08057 54 AEGLAAYLREEGIDLVI-DATHPYAAQISANAAAACRALGIPYLRLER 100 (248)
T ss_pred HHHHHHHHHHCCCCEEE-ECCCccHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 46788888999999987 5433543 4567899999999865
No 323
>CHL00067 rps2 ribosomal protein S2
Probab=20.03 E-value=1.3e+02 Score=26.52 Aligned_cols=33 Identities=27% Similarity=0.348 Sum_probs=24.4
Q ss_pred CCCEEE-EcCCC-CcHHHHHHhcCCCeEEEeccch
Q 038300 78 SPDLLI-YDLIQ-PWAPALASSLNIPAVYFLVSSA 110 (401)
Q Consensus 78 ~pD~vI-~D~~~-~~~~~~A~~lgIP~v~~~~~~~ 110 (401)
.||+|| .|+-. ..+..-|.++|||.|++.-+.+
T Consensus 161 ~P~~iiv~d~~~~~~ai~Ea~~l~IPvIaivDTn~ 195 (230)
T CHL00067 161 LPDIVIIIDQQEEYTALRECRKLGIPTISILDTNC 195 (230)
T ss_pred CCCEEEEeCCcccHHHHHHHHHcCCCEEEEEeCCC
Confidence 489766 66543 3567788999999999987643
No 324
>TIGR02931 anfK_nitrog Fe-only nitrogenase, beta subunit. Nitrogenase is the enzyme of biological nitrogen fixation. The most wide-spread and most efficient nitrogenase contains a molybdenum cofactor. This protein family, AnfK, represents the beta subunit of the iron-only alternative nitrogenase. It is homologous to NifK and VnfK, of the molybdenum-containing and the vanadium (V)-containing types, respectively.
Probab=20.00 E-value=1.7e+02 Score=28.84 Aligned_cols=36 Identities=25% Similarity=0.192 Sum_probs=28.2
Q ss_pred HHHHHHHhh--cCCCEEEEcCCCCcHHHHHHhcCCCeEEEe
Q 038300 68 PSFFNILKN--LSPDLLIYDLIQPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 68 ~~l~~~l~~--~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~ 106 (401)
..+.+.+++ .+||++|... ++..+|+++|||++.+.
T Consensus 376 ~~l~~~i~~~~~~~Dliig~s---~~~~~a~k~gip~~~~g 413 (461)
T TIGR02931 376 WELESRIKNQGLELDLILGHS---KGRFISIDYNIPMVRVG 413 (461)
T ss_pred HHHHHHHHhcCCCCCEEEECc---chHHHHHHcCCCEEEec
Confidence 456667775 5899999774 57899999999998763
Done!