Query 038300
Match_columns 401
No_of_seqs 198 out of 1762
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 16:26:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038300.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038300hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 2.4E-56 8.1E-61 430.0 31.5 377 2-397 40-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 6.9E-51 2.3E-55 398.1 39.4 384 3-398 35-469 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2.8E-51 9.5E-56 402.0 30.9 384 1-398 34-479 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 2.5E-48 8.6E-53 377.5 34.1 378 3-397 37-451 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 1.8E-47 6.1E-52 372.5 31.1 373 3-397 39-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 1.3E-36 4.3E-41 294.1 29.8 350 1-398 38-421 (424)
7 4amg_A Snogd; transferase, pol 100.0 6.7E-34 2.3E-38 272.7 22.2 320 1-396 48-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 4.7E-33 1.6E-37 268.2 26.7 343 1-397 26-399 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 1.1E-32 3.9E-37 265.6 26.5 338 1-396 26-399 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 8.4E-32 2.9E-36 259.4 25.6 352 1-397 46-412 (415)
11 3h4t_A Glycosyltransferase GTF 100.0 6.5E-31 2.2E-35 252.2 26.6 340 1-396 26-380 (404)
12 3ia7_A CALG4; glycosysltransfe 100.0 6.5E-31 2.2E-35 251.9 25.4 352 1-397 30-397 (402)
13 2iyf_A OLED, oleandomycin glyc 100.0 2.7E-30 9.3E-35 250.0 27.5 350 1-395 33-396 (430)
14 2p6p_A Glycosyl transferase; X 100.0 3.9E-29 1.3E-33 238.3 24.7 319 1-397 26-378 (384)
15 2yjn_A ERYCIII, glycosyltransf 100.0 1.5E-28 5.3E-33 238.5 22.8 334 1-397 46-434 (441)
16 4fzr_A SSFS6; structural genom 100.0 3.9E-28 1.4E-32 232.5 18.6 317 1-394 41-396 (398)
17 3tsa_A SPNG, NDP-rhamnosyltran 99.9 1.9E-26 6.5E-31 220.2 22.9 319 1-396 27-386 (391)
18 3oti_A CALG3; calicheamicin, T 99.9 2.1E-26 7.3E-31 220.4 21.9 319 1-396 46-395 (398)
19 3otg_A CALG1; calicheamicin, T 99.9 8.4E-24 2.9E-28 203.1 28.8 318 1-396 46-406 (412)
20 2o6l_A UDP-glucuronosyltransfe 99.9 7.2E-23 2.5E-27 172.1 15.6 135 228-383 36-170 (170)
21 3s2u_A UDP-N-acetylglucosamine 99.9 2.1E-21 7.3E-26 183.2 23.9 116 274-400 234-355 (365)
22 1f0k_A MURG, UDP-N-acetylgluco 99.6 1.1E-12 3.7E-17 123.3 24.7 82 275-361 237-322 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.5 7.6E-14 2.6E-18 120.5 8.7 76 276-361 115-196 (224)
24 3hbm_A UDP-sugar hydrolase; PS 98.9 3.4E-09 1.2E-13 95.1 8.9 96 234-341 175-272 (282)
25 3okp_A GDP-mannose-dependent a 98.9 1.6E-06 5.4E-11 81.7 27.3 111 275-400 253-380 (394)
26 3ot5_A UDP-N-acetylglucosamine 98.8 1.2E-07 4.3E-12 90.0 16.0 106 275-399 282-391 (403)
27 3dzc_A UDP-N-acetylglucosamine 98.8 1.7E-07 5.7E-12 89.0 15.8 104 274-396 287-394 (396)
28 2jjm_A Glycosyl transferase, g 98.7 1.6E-05 5.5E-10 75.0 26.9 110 275-398 267-384 (394)
29 4hwg_A UDP-N-acetylglucosamine 98.7 1.4E-06 4.7E-11 82.2 18.9 77 275-364 263-342 (385)
30 3c48_A Predicted glycosyltrans 98.5 8.6E-05 2.9E-09 70.9 27.3 79 274-363 305-390 (438)
31 3fro_A GLGA glycogen synthase; 98.4 0.00013 4.3E-09 69.5 24.9 110 275-399 311-430 (439)
32 2gek_A Phosphatidylinositol ma 98.4 7.2E-05 2.5E-09 70.5 23.0 111 274-398 262-382 (406)
33 2r60_A Glycosyl transferase, g 98.3 6.6E-05 2.3E-09 73.2 20.8 79 274-363 334-423 (499)
34 1v4v_A UDP-N-acetylglucosamine 98.0 1.3E-05 4.4E-10 75.1 9.1 83 275-373 255-340 (376)
35 1vgv_A UDP-N-acetylglucosamine 98.0 1.2E-05 4.2E-10 75.4 8.8 82 275-372 263-347 (384)
36 2f9f_A First mannosyl transfer 97.8 0.00016 5.6E-09 59.8 10.9 79 274-364 77-162 (177)
37 3beo_A UDP-N-acetylglucosamine 97.6 0.00015 5.1E-09 67.6 8.2 82 275-372 263-347 (375)
38 2iw1_A Lipopolysaccharide core 97.4 0.00071 2.4E-08 62.8 10.6 80 274-363 252-336 (374)
39 2xci_A KDO-transferase, 3-deox 97.2 0.00047 1.6E-08 64.5 7.1 94 276-378 261-360 (374)
40 2x6q_A Trehalose-synthase TRET 97.2 0.002 6.8E-08 60.9 11.4 110 274-399 292-414 (416)
41 3rhz_A GTF3, nucleotide sugar 97.2 0.001 3.5E-08 61.2 8.2 109 276-396 215-337 (339)
42 2iuy_A Avigt4, glycosyltransfe 97.1 0.0028 9.4E-08 58.1 11.1 77 275-363 212-307 (342)
43 2vsy_A XCC0866; transferase, g 97.1 0.011 3.8E-07 58.2 16.1 90 275-375 434-530 (568)
44 3oy2_A Glycosyltransferase B73 97.1 0.0079 2.7E-07 56.6 13.9 82 277-373 256-361 (413)
45 2bfw_A GLGA glycogen synthase; 96.9 0.0055 1.9E-07 51.2 9.9 77 276-364 96-181 (200)
46 3q3e_A HMW1C-like glycosyltran 96.4 0.04 1.4E-06 54.2 13.1 127 225-363 451-587 (631)
47 4gyw_A UDP-N-acetylglucosamine 96.3 0.076 2.6E-06 54.0 15.2 127 224-363 532-667 (723)
48 3qhp_A Type 1 capsular polysac 96.3 0.013 4.5E-07 47.2 7.9 75 276-363 57-139 (166)
49 1rzu_A Glycogen synthase 1; gl 96.2 0.039 1.3E-06 53.0 11.9 77 275-362 346-438 (485)
50 2qzs_A Glycogen synthase; glyc 96.1 0.057 1.9E-06 51.9 12.8 77 275-362 347-439 (485)
51 3s28_A Sucrose synthase 1; gly 94.2 0.19 6.6E-06 51.5 10.0 77 275-362 640-728 (816)
52 2x0d_A WSAF; GT4 family, trans 94.1 0.023 7.9E-07 53.7 2.9 83 276-373 296-385 (413)
53 2hy7_A Glucuronosyltransferase 93.7 0.093 3.2E-06 49.3 6.2 73 275-364 265-352 (406)
54 1uqt_A Alpha, alpha-trehalose- 90.5 2.5 8.6E-05 40.5 12.0 105 279-398 336-453 (482)
55 3vue_A GBSS-I, granule-bound s 88.3 4.9 0.00017 39.1 12.4 93 274-373 381-486 (536)
56 3t5t_A Putative glycosyltransf 81.9 12 0.00042 35.7 11.5 108 276-397 353-471 (496)
57 3tov_A Glycosyl transferase fa 73.9 4.1 0.00014 37.0 5.4 84 226-319 200-286 (349)
58 3nb0_A Glycogen [starch] synth 73.9 19 0.00063 36.0 10.1 35 287-323 514-552 (725)
59 2lpm_A Two-component response 68.6 4.5 0.00015 30.6 3.6 39 69-107 44-87 (123)
60 1psw_A ADP-heptose LPS heptosy 66.7 7.3 0.00025 35.0 5.4 84 226-319 196-286 (348)
61 3to5_A CHEY homolog; alpha(5)b 66.5 10 0.00035 29.0 5.4 40 70-109 49-97 (134)
62 3gl9_A Response regulator; bet 65.4 13 0.00044 27.2 5.8 40 70-109 38-86 (122)
63 2iz6_A Molybdenum cofactor car 64.6 19 0.00066 29.0 6.9 78 277-363 91-173 (176)
64 2gt1_A Lipopolysaccharide hept 63.6 2.9 0.0001 37.4 2.0 121 225-363 192-321 (326)
65 3tl4_X Glutaminyl-tRNA synthet 58.6 5.5 0.00019 32.5 2.6 49 326-383 102-154 (187)
66 2phj_A 5'-nucleotidase SURE; S 58.1 24 0.00082 30.3 6.6 89 2-108 27-128 (251)
67 3t6k_A Response regulator rece 56.7 22 0.00074 26.6 5.8 40 70-109 40-88 (136)
68 3m6m_D Sensory/regulatory prot 55.4 17 0.00057 27.5 4.9 40 69-108 49-99 (143)
69 1v4v_A UDP-N-acetylglucosamine 51.3 11 0.00038 34.1 3.8 39 67-105 80-121 (376)
70 3f6p_A Transcriptional regulat 50.9 28 0.00096 25.1 5.4 41 69-109 37-83 (120)
71 3c3m_A Response regulator rece 50.8 30 0.001 25.7 5.7 40 69-108 38-86 (138)
72 3cg0_A Response regulator rece 48.7 29 0.00099 25.7 5.3 41 69-109 45-92 (140)
73 3a10_A Response regulator; pho 48.4 42 0.0014 23.7 6.1 39 70-108 37-82 (116)
74 3pdi_B Nitrogenase MOFE cofact 48.2 18 0.0006 34.3 4.6 35 69-106 366-400 (458)
75 1eiw_A Hypothetical protein MT 47.8 27 0.00093 25.7 4.6 65 289-363 36-109 (111)
76 1qkk_A DCTD, C4-dicarboxylate 47.5 79 0.0027 23.8 7.9 47 312-363 74-120 (155)
77 1dbw_A Transcriptional regulat 47.2 32 0.0011 25.0 5.2 40 70-109 39-85 (126)
78 1zgz_A Torcad operon transcrip 45.4 40 0.0014 24.1 5.5 41 69-109 37-83 (122)
79 1vgv_A UDP-N-acetylglucosamine 45.1 14 0.00048 33.5 3.4 41 67-107 75-118 (384)
80 1yt5_A Inorganic polyphosphate 45.1 18 0.00062 31.1 3.9 53 291-364 41-96 (258)
81 2rjn_A Response regulator rece 45.0 34 0.0011 26.0 5.3 41 69-109 42-89 (154)
82 2a9o_A Response regulator; ess 44.6 43 0.0015 23.8 5.6 39 71-109 38-82 (120)
83 1xhf_A DYE resistance, aerobic 44.1 46 0.0016 23.8 5.7 40 70-109 39-84 (123)
84 1tmy_A CHEY protein, TMY; chem 44.0 38 0.0013 24.2 5.2 39 71-109 40-85 (120)
85 2wqk_A 5'-nucleotidase SURE; S 43.8 16 0.00056 31.3 3.4 88 2-107 27-127 (251)
86 2rdm_A Response regulator rece 42.9 48 0.0016 24.0 5.7 41 69-109 40-89 (132)
87 2pl1_A Transcriptional regulat 42.5 56 0.0019 23.2 6.0 41 69-109 35-82 (121)
88 1rzu_A Glycogen synthase 1; gl 42.5 28 0.00096 32.7 5.2 34 75-108 127-164 (485)
89 1srr_A SPO0F, sporulation resp 42.5 39 0.0013 24.3 5.1 39 71-109 40-85 (124)
90 4ep4_A Crossover junction endo 42.0 49 0.0017 26.3 5.7 48 61-108 46-108 (166)
91 3gt7_A Sensor protein; structu 41.7 46 0.0016 25.3 5.6 41 69-109 42-91 (154)
92 3nhm_A Response regulator; pro 41.2 58 0.002 23.6 6.0 40 69-108 38-86 (133)
93 2qxy_A Response regulator; reg 41.0 40 0.0014 25.0 5.0 40 69-109 39-85 (142)
94 2i2c_A Probable inorganic poly 40.8 23 0.00079 30.8 3.9 52 292-364 36-93 (272)
95 2qr3_A Two-component system re 40.4 35 0.0012 25.2 4.6 41 69-109 38-90 (140)
96 3eod_A Protein HNR; response r 40.3 45 0.0015 24.2 5.2 41 69-109 42-89 (130)
97 2qzj_A Two-component response 39.8 39 0.0013 25.1 4.7 40 70-109 40-85 (136)
98 3cz5_A Two-component response 39.6 61 0.0021 24.4 6.0 40 70-109 43-89 (153)
99 3cfy_A Putative LUXO repressor 39.3 47 0.0016 24.6 5.2 40 70-109 40-86 (137)
100 1mb3_A Cell division response 38.9 41 0.0014 24.1 4.7 37 72-108 39-84 (124)
101 3cu5_A Two component transcrip 38.8 47 0.0016 24.8 5.1 38 71-108 42-86 (141)
102 1p6q_A CHEY2; chemotaxis, sign 38.3 47 0.0016 24.0 5.0 39 70-108 43-90 (129)
103 3l7i_A Teichoic acid biosynthe 38.0 26 0.0009 35.3 4.4 95 280-383 604-700 (729)
104 2jk1_A HUPR, hydrogenase trans 37.8 1.1E+02 0.0039 22.3 7.3 47 312-363 71-118 (139)
105 2b4a_A BH3024; flavodoxin-like 36.9 49 0.0017 24.4 4.9 39 68-106 49-95 (138)
106 3pdi_A Nitrogenase MOFE cofact 36.6 26 0.00089 33.4 3.9 36 67-105 390-425 (483)
107 3u7q_A Nitrogenase molybdenum- 36.6 27 0.00091 33.4 3.9 36 67-105 406-441 (492)
108 2pju_A Propionate catabolism o 36.4 30 0.001 29.1 3.8 29 292-323 64-92 (225)
109 3h5i_A Response regulator/sens 36.4 68 0.0023 23.7 5.7 39 70-108 41-87 (140)
110 1jbe_A Chemotaxis protein CHEY 36.3 68 0.0023 23.1 5.6 40 70-109 41-89 (128)
111 3c97_A Signal transduction his 36.1 71 0.0024 23.5 5.8 29 69-97 45-75 (140)
112 1kgs_A DRRD, DNA binding respo 36.1 61 0.0021 26.4 5.8 40 70-109 38-84 (225)
113 2oxj_A Hybrid alpha/beta pepti 36.1 55 0.0019 18.1 3.4 29 352-382 4-32 (34)
114 3n0r_A Response regulator; sig 35.9 26 0.0009 30.6 3.5 40 69-108 196-242 (286)
115 3sz8_A 2-dehydro-3-deoxyphosph 35.7 1.5E+02 0.0051 25.9 8.2 56 307-362 189-270 (285)
116 3s28_A Sucrose synthase 1; gly 35.5 18 0.00063 37.0 2.7 39 70-108 397-439 (816)
117 1qkk_A DCTD, C4-dicarboxylate 35.0 46 0.0016 25.2 4.6 40 70-109 39-85 (155)
118 1ys7_A Transcriptional regulat 34.9 63 0.0022 26.5 5.8 39 70-108 43-88 (233)
119 2j48_A Two-component sensor ki 34.8 66 0.0023 22.4 5.2 40 70-109 37-85 (119)
120 2hy6_A General control protein 34.7 60 0.0021 17.9 3.6 29 352-382 4-32 (34)
121 2r25_B Osmosensing histidine p 34.3 87 0.003 22.8 6.0 33 77-109 51-91 (133)
122 1hjr_A Holliday junction resol 34.1 63 0.0022 25.4 5.1 45 64-108 45-104 (158)
123 1yio_A Response regulatory pro 33.5 45 0.0015 26.9 4.5 38 71-108 41-85 (208)
124 3md9_A Hemin-binding periplasm 33.3 38 0.0013 28.7 4.1 37 69-106 51-89 (255)
125 2qv0_A Protein MRKE; structura 33.2 77 0.0026 23.3 5.6 30 69-98 46-77 (143)
126 1mio_B Nitrogenase molybdenum 33.1 40 0.0014 31.8 4.6 37 67-106 374-410 (458)
127 4hn9_A Iron complex transport 32.8 29 0.001 31.0 3.4 35 73-107 111-145 (335)
128 3rqi_A Response regulator prot 32.4 43 0.0015 26.5 4.1 41 69-109 42-89 (184)
129 3goc_A Endonuclease V; alpha-b 32.3 71 0.0024 27.0 5.3 43 67-109 94-145 (237)
130 1o97_C Electron transferring f 31.8 62 0.0021 27.9 5.1 42 67-108 101-148 (264)
131 1a04_A Nitrate/nitrite respons 31.7 60 0.0021 26.3 5.0 38 71-108 44-88 (215)
132 3n53_A Response regulator rece 30.8 57 0.002 24.0 4.4 40 69-108 37-85 (140)
133 3i42_A Response regulator rece 30.3 94 0.0032 22.2 5.5 40 69-108 38-86 (127)
134 2w36_A Endonuclease V; hypoxan 30.3 79 0.0027 26.5 5.3 43 67-109 90-141 (225)
135 1k66_A Phytochrome response re 30.2 1.1E+02 0.0036 22.6 5.9 33 77-109 61-102 (149)
136 3f6c_A Positive transcription 30.2 67 0.0023 23.3 4.7 36 73-108 41-83 (134)
137 3tsa_A SPNG, NDP-rhamnosyltran 30.1 72 0.0025 28.7 5.7 29 291-321 114-143 (391)
138 2r7a_A Bacterial heme binding 30.0 46 0.0016 28.1 4.1 37 69-106 51-89 (256)
139 3r0j_A Possible two component 29.6 76 0.0026 26.5 5.4 42 68-109 57-105 (250)
140 2qvg_A Two component response 29.5 1.1E+02 0.0036 22.5 5.8 42 68-109 43-99 (143)
141 3beo_A UDP-N-acetylglucosamine 29.3 49 0.0017 29.5 4.3 39 67-105 84-125 (375)
142 1dz3_A Stage 0 sporulation pro 28.9 80 0.0027 22.8 4.9 38 71-108 41-86 (130)
143 2xdq_B Light-independent proto 28.8 35 0.0012 32.7 3.3 35 69-106 363-397 (511)
144 2oqr_A Sensory transduction pr 28.7 76 0.0026 25.9 5.2 41 70-110 40-86 (230)
145 2lnd_A De novo designed protei 28.7 1.3E+02 0.0043 20.4 5.0 49 311-363 49-100 (112)
146 3u7q_B Nitrogenase molybdenum- 28.5 52 0.0018 31.7 4.5 37 67-106 427-470 (523)
147 1efv_B Electron transfer flavo 28.4 76 0.0026 27.2 5.1 41 68-108 106-152 (255)
148 2gwr_A DNA-binding response re 28.4 66 0.0023 26.6 4.8 37 72-108 43-85 (238)
149 3aek_B Light-independent proto 28.3 39 0.0013 32.6 3.5 35 68-105 339-373 (525)
150 2etv_A Iron(III) ABC transport 28.0 43 0.0015 30.1 3.6 38 69-107 88-126 (346)
151 3cg4_A Response regulator rece 27.8 74 0.0025 23.4 4.6 40 68-107 41-89 (142)
152 3q9s_A DNA-binding response re 27.0 97 0.0033 25.9 5.6 41 69-109 72-118 (249)
153 1efp_B ETF, protein (electron 26.9 76 0.0026 27.1 4.8 41 68-108 103-149 (252)
154 2q8p_A Iron-regulated surface 26.5 39 0.0013 28.7 3.0 38 69-107 52-90 (260)
155 1n2z_A Vitamin B12 transport p 26.5 70 0.0024 26.8 4.6 38 69-107 49-88 (245)
156 3m48_A General control protein 26.3 55 0.0019 18.0 2.4 28 353-382 4-31 (33)
157 2bni_A General control protein 26.3 70 0.0024 17.7 2.8 29 352-382 4-32 (34)
158 3c3g_A Alpha/beta peptide with 26.3 87 0.003 17.2 3.5 29 352-382 3-31 (33)
159 3psh_A Protein HI_1472; substr 26.0 60 0.002 28.6 4.2 39 69-108 76-115 (326)
160 2gkg_A Response regulator homo 25.6 91 0.0031 22.1 4.6 46 312-363 79-124 (127)
161 2r79_A Periplasmic binding pro 25.2 64 0.0022 27.8 4.2 36 69-105 51-88 (283)
162 1kd8_B GABH BLL, GCN4 acid bas 24.8 1E+02 0.0034 17.3 3.8 30 352-383 4-33 (36)
163 1ydh_A AT5G11950; structural g 24.6 2E+02 0.0069 23.8 6.9 44 277-321 89-143 (216)
164 2an1_A Putative kinase; struct 24.5 48 0.0017 28.9 3.2 30 290-321 62-95 (292)
165 1u0t_A Inorganic polyphosphate 24.3 42 0.0014 29.7 2.8 55 288-363 72-130 (307)
166 2jba_A Phosphate regulon trans 24.3 46 0.0016 24.0 2.7 38 72-109 40-86 (127)
167 1mio_A Nitrogenase molybdenum 24.2 49 0.0017 31.9 3.4 35 68-105 446-480 (533)
168 2q5c_A NTRC family transcripti 24.0 61 0.0021 26.4 3.5 38 70-110 134-171 (196)
169 3bre_A Probable two-component 23.8 94 0.0032 27.6 5.2 40 70-109 55-103 (358)
170 3ga2_A Endonuclease V; alpha-b 23.2 93 0.0032 26.4 4.5 42 67-108 96-146 (246)
171 2ayx_A Sensor kinase protein R 22.8 96 0.0033 26.1 4.8 41 69-109 164-211 (254)
172 3c3f_A Alpha/beta peptide with 22.6 1.1E+02 0.0037 16.9 3.5 29 352-382 4-32 (34)
173 3kcn_A Adenylate cyclase homol 22.5 2.4E+02 0.0081 20.8 7.4 46 312-363 75-122 (151)
174 3c3w_A Two component transcrip 22.2 58 0.002 26.8 3.2 39 70-108 39-84 (225)
175 2rjn_A Response regulator rece 21.4 47 0.0016 25.1 2.3 47 312-363 78-125 (154)
176 1efd_N Ferrichrome-binding per 21.0 78 0.0027 26.9 3.8 36 69-106 58-93 (266)
177 3t8y_A CHEB, chemotaxis respon 21.0 1.7E+02 0.0059 22.2 5.6 40 69-108 62-107 (164)
178 1uo4_A General control protein 20.9 89 0.003 17.3 2.5 29 352-382 4-32 (34)
179 1vi6_A 30S ribosomal protein S 20.6 73 0.0025 26.4 3.3 32 78-109 115-148 (208)
180 1s8n_A Putative antiterminator 20.2 1.5E+02 0.0051 23.6 5.3 41 69-109 49-95 (205)
181 2q5c_A NTRC family transcripti 20.0 29 0.00098 28.5 0.7 47 294-341 52-101 (196)
182 1qgu_B Protein (nitrogenase mo 20.0 86 0.003 30.1 4.2 36 67-105 423-465 (519)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=2.4e-56 Score=430.02 Aligned_cols=377 Identities=24% Similarity=0.320 Sum_probs=283.8
Q ss_pred CC--eEEEEEeCCccchhhhccc-cCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHH-hhchHHHHHHHhh-
Q 038300 2 SN--FHICFCSTPSILNSIKQLD-KFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAF-DMASPSFFNILKN- 76 (401)
Q Consensus 2 rG--~~Vt~~~~~~~~~~i~~~~-~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~- 76 (401)
|| ++|||++|+.+..++.+.. ..+++|+|+++| +|+|.+.+...+ +......+...+ ..+.+.+++++++
T Consensus 40 ~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ip----dglp~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~ 114 (454)
T 3hbf_A 40 EAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVH----DGLPKGYVSSGN-PREPIFLFIKAMQENFKHVIDEAVAET 114 (454)
T ss_dssp HCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECC----CCCCTTCCCCSC-TTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecC----CCCCCCccccCC-hHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 57 9999999998877765542 123579999997 788877655443 223333333333 2344555555544
Q ss_pred -cCCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcc---cC-----CCCCCCCC-CCCCCCCcccccccc
Q 038300 77 -LSPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIK---KN-----SLGDANDD-DEEFPSSSIFIHDYY 146 (401)
Q Consensus 77 -~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~---~~-----~~~~~p~~-~~~~~~~~~~~~~~~ 146 (401)
.++||||+|++++|+.++|+++|||++.|++++++.++.+.+... .. .... ++. .++++.+...+++..
T Consensus 115 ~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iPg~p~~~~~dlp~~ 193 (454)
T 3hbf_A 115 GKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEVHDVK-SIDVLPGFPELKASDLPEG 193 (454)
T ss_dssp CCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHHHHTTSS-CBCCSTTSCCBCGGGSCTT
T ss_pred CCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCCcccccc-ccccCCCCCCcChhhCchh
Confidence 368999999999999999999999999999999988876655322 10 0011 111 233444555555554
Q ss_pred ccccCCCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCC-CCCCcccchHhhhhh--
Q 038300 147 MKSYFSNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDP-VEQTDHEKGATEIIH-- 223 (401)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~-~~~~~~~~~~~~~l~-- 223 (401)
+.. .........+.+..+.+.+ ++++|+||+++||+++++++++.+ +++++|||+.... .....++.+|.+|||
T Consensus 194 ~~~-~~~~~~~~~~~~~~~~~~~-~~~vl~ns~~eLE~~~~~~~~~~~-~~v~~vGPl~~~~~~~~~~~~~~~~~wLd~~ 270 (454)
T 3hbf_A 194 VIK-DIDVPFATMLHKMGLELPR-ANAVAINSFATIHPLIENELNSKF-KLLLNVGPFNLTTPQRKVSDEHGCLEWLDQH 270 (454)
T ss_dssp SSS-CTTSHHHHHHHHHHHHGGG-SSCEEESSCGGGCHHHHHHHHTTS-SCEEECCCHHHHSCCSCCCCTTCHHHHHHTS
T ss_pred hcc-CCchHHHHHHHHHHHhhcc-CCEEEECChhHhCHHHHHHHHhcC-CCEEEECCcccccccccccchHHHHHHHhcC
Confidence 431 1111113345556666777 999999999999999999998877 5999999996532 111111234999998
Q ss_pred ------------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhhhccc
Q 038300 224 ------------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMKILGH 291 (401)
Q Consensus 224 ------------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~ 291 (401)
...++.+++.+++.+|+.++++|||+++... ...+|++|.++..+ |+++.+|+||.++|+|
T Consensus 271 ~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~------~~~lp~~~~~~~~~-~~~vv~w~Pq~~vL~h 343 (454)
T 3hbf_A 271 ENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDP------KEKLPKGFLERTKT-KGKIVAWAPQVEILKH 343 (454)
T ss_dssp CTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCH------HHHSCTTHHHHTTT-TEEEESSCCHHHHHHS
T ss_pred CCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcc------hhcCCHhHHhhcCC-ceEEEeeCCHHHHHhh
Confidence 3456788999999999999999999998531 23478888887765 4555699999999999
Q ss_pred CCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhh-CeeeeeeccCCCCCCHHHHHHHHHHHhcCcccHHH
Q 038300 292 PSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDV-GIGLEVRRNKCGRIQREEMARVIKEVVMEREGEKI 370 (401)
Q Consensus 292 ~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~-g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 370 (401)
+++++|||||||||++|++++|||+|++|+++||+.||+++++. |+|+.+ +.+.+++++|+++|+++|+++++++|
T Consensus 344 ~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l---~~~~~~~~~l~~av~~ll~~~~~~~~ 420 (454)
T 3hbf_A 344 SSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGV---DNGVLTKESIKKALELTMSSEKGGIM 420 (454)
T ss_dssp TTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEEC---GGGSCCHHHHHHHHHHHHSSHHHHHH
T ss_pred cCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEe---cCCCCCHHHHHHHHHHHHCCChHHHH
Confidence 99999999999999999999999999999999999999999996 999999 55679999999999999985445699
Q ss_pred HHHHHHHHHHHHh----hc--HHHHHHHHHHHH
Q 038300 371 KRKTREMGEKIKE----KG--EEEIEWVADELI 397 (401)
Q Consensus 371 ~~~a~~~~~~~~~----~~--~~~~~~~v~~~~ 397 (401)
|+||+++++.+++ +| .++++++|+++.
T Consensus 421 r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 421 RQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp HHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 9999999999986 45 778999998874
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=6.9e-51 Score=398.05 Aligned_cols=384 Identities=27% Similarity=0.402 Sum_probs=274.1
Q ss_pred CeEEEEEeCCc--cchhhhcccc-CCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhc--
Q 038300 3 NFHICFCSTPS--ILNSIKQLDK-FSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNL-- 77 (401)
Q Consensus 3 G~~Vt~~~~~~--~~~~i~~~~~-~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-- 77 (401)
||+|||++++. +...+++... .+.+++|++++.+. ++ +. .. ...+...+......+.+.+++++++.
T Consensus 35 Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~---~~-~~---~~-~~~~~~~~~~~~~~~~~~l~~ll~~~~~ 106 (480)
T 2vch_A 35 GLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVD---LT-DL---SS-STRIESRISLTVTRSNPELRKVFDSFVE 106 (480)
T ss_dssp CCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCC---CT-TS---CT-TCCHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCC---CC-CC---CC-chhHHHHHHHHHHhhhHHHHHHHHHhcc
Confidence 99999999988 3454543110 12489999987321 11 11 11 12344445566667788899999874
Q ss_pred --CC-CEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcc----cCCC----CCCCCCCCCCCCCcccccccc
Q 038300 78 --SP-DLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIK----KNSL----GDANDDDEEFPSSSIFIHDYY 146 (401)
Q Consensus 78 --~p-D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~----~~~~----~~~p~~~~~~~~~~~~~~~~~ 146 (401)
++ ||||+|.++.|+..+|+++|||+|.++++++...+.+.+... ...+ .. +...++++.+....++..
T Consensus 107 ~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Pg~~p~~~~~l~~~ 185 (480)
T 2vch_A 107 GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTE-PLMLPGCVPVAGKDFLDP 185 (480)
T ss_dssp TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSCGGGCSS-CBCCTTCCCBCGGGSCGG
T ss_pred CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCCcccccCC-cccCCCCCCCChHHCchh
Confidence 78 999999999999999999999999999999876655433211 0000 00 001112222222222222
Q ss_pred ccccCCCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhc--CCCeeeecccCCCCCCC--CcccchHhhhh
Q 038300 147 MKSYFSNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLI--KKKVVPVGPLVQDPVEQ--TDHEKGATEII 222 (401)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~--~~~v~~vGPl~~~~~~~--~~~~~~~~~~l 222 (401)
+.. .... ....+.+....+++ ++++++||+.+||++...++.+.. .+++++|||+....... ...+.+|.+||
T Consensus 186 ~~~-~~~~-~~~~~~~~~~~~~~-~~g~~~nt~~ele~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~wL 262 (480)
T 2vch_A 186 AQD-RKDD-AYKWLLHNTKRYKE-AEGILVNTFFELEPNAIKALQEPGLDKPPVYPVGPLVNIGKQEAKQTEESECLKWL 262 (480)
T ss_dssp GSC-TTSH-HHHHHHHHHHHGGG-CSEEEESCCTTTSHHHHHHHHSCCTTCCCEEECCCCCCCSCSCC-----CHHHHHH
T ss_pred hhc-CCch-HHHHHHHHHHhccc-CCEEEEcCHHHHhHHHHHHHHhcccCCCcEEEEeccccccccccCccchhHHHHHh
Confidence 210 0000 01222333455666 889999999999998887776421 25899999997653110 11224599999
Q ss_pred h--------------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCC----------CcccccCchhHHHhhcCCceE
Q 038300 223 H--------------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAK----------VKVDEELPESFLERTKERAMV 278 (401)
Q Consensus 223 ~--------------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 278 (401)
| ....+.+++.+++.+|+.++++|||+++...... ......+|++|.+++.++|++
T Consensus 263 d~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~ 342 (480)
T 2vch_A 263 DNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFV 342 (480)
T ss_dssp HTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEE
T ss_pred cCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEE
Confidence 8 3446788999999999999999999998643110 111235899999999999998
Q ss_pred EcccCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHH-HhhCeeeeeeccCCCCCCHHHHHHH
Q 038300 279 IEGWAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLV-EDVGIGLEVRRNKCGRIQREEMARV 357 (401)
Q Consensus 279 ~~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~-~~~g~g~~l~~~~~~~~~~~~l~~~ 357 (401)
+.+|+||.+||+|+++++|||||||||++||+++|||+|++|+++||+.||+++ ++.|+|+.+...+.+.+++++|+++
T Consensus 343 v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~a 422 (480)
T 2vch_A 343 IPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARV 422 (480)
T ss_dssp EESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHH
T ss_pred EeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHH
Confidence 878999999999999999999999999999999999999999999999999998 5789999994321237999999999
Q ss_pred HHHHhcCcccHHHHHHHHHHHHHHHh----hc--HHHHHHHHHHHHh
Q 038300 358 IKEVVMEREGEKIKRKTREMGEKIKE----KG--EEEIEWVADELIH 398 (401)
Q Consensus 358 i~~~l~~~~~~~~~~~a~~~~~~~~~----~~--~~~~~~~v~~~~~ 398 (401)
|+++|+++++++||+||+++++.+++ +| ..+++++|+++.+
T Consensus 423 v~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 423 VKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 99999866678999999999999987 34 6789999998864
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2.8e-51 Score=401.99 Aligned_cols=384 Identities=23% Similarity=0.390 Sum_probs=267.9
Q ss_pred CCCeEEEEEeCCccchhhhcccc---C--CCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHh
Q 038300 1 GSNFHICFCSTPSILNSIKQLDK---F--SLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILK 75 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~---~--~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 75 (401)
+|||+|||++++.+..++.+... . .++++|+++| +++|....+. +...++...+......+.+.++++++
T Consensus 34 ~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~----~~lp~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~ll~ 108 (482)
T 2pq6_A 34 LRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP----DGLTPMEGDG-DVSQDVPTLCQSVRKNFLKPYCELLT 108 (482)
T ss_dssp HTTCEEEEEEEHHHHHHHC------------CEEEEEEC----CCCC----------CCHHHHHHHHTTSSHHHHHHHHH
T ss_pred hCCCeEEEEeCCchhhhhccccccccccCCCceEEEECC----CCCCCccccc-CcchhHHHHHHHHHHHhhHHHHHHHH
Confidence 38999999999998877654310 0 1389999997 4665421001 11123333333333566778888887
Q ss_pred h-------cCCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCCCCCCCC---------------
Q 038300 76 N-------LSPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDE--------------- 133 (401)
Q Consensus 76 ~-------~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--------------- 133 (401)
+ .+|||||+|.+++|+..+|+++|||+|.++++++.....+.+.......++.|....
T Consensus 109 ~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 188 (482)
T 2pq6_A 109 RLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWI 188 (482)
T ss_dssp HHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSS
T ss_pred HHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhcCCCCCccccccccccccCccccC
Confidence 4 478999999999999999999999999999998876654432211111122222110
Q ss_pred -CCCCCccccccccccccCCCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCC-C-C-
Q 038300 134 -EFPSSSIFIHDYYMKSYFSNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQD-P-V- 209 (401)
Q Consensus 134 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~-~-~- 209 (401)
.++.+....++.++............+.+..+...+ ++++|+||+++||+++++++++.+ +++++|||+... + .
T Consensus 189 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vl~nt~~~le~~~~~~~~~~~-~~v~~VGPl~~~~~~~~ 266 (482)
T 2pq6_A 189 PGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNK-DTTILLNTFNELESDVINALSSTI-PSIYPIGPLPSLLKQTP 266 (482)
T ss_dssp TTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCT-TCCEEESSCGGGGHHHHHHHHTTC-TTEEECCCHHHHHHTST
T ss_pred CCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhcc-CCEEEEcChHHHhHHHHHHHHHhC-CcEEEEcCCcccccccc
Confidence 111111112222221110010001222233444455 899999999999999999999887 689999999642 1 1
Q ss_pred ------C--CC--cccchHhhhhh--------------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCc
Q 038300 210 ------E--QT--DHEKGATEIIH--------------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELP 265 (401)
Q Consensus 210 ------~--~~--~~~~~~~~~l~--------------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~ 265 (401)
. .. +++.+|.+||| ...++.+++.+++.+|+..+++|||+++...... ....+|
T Consensus 267 ~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~--~~~~l~ 344 (482)
T 2pq6_A 267 QIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIG--GSVIFS 344 (482)
T ss_dssp TGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEECCGGGSTT--TGGGSC
T ss_pred cccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhcCCcEEEEEcCCcccc--ccccCc
Confidence 0 01 12234899998 3346778899999999999999999987531110 012378
Q ss_pred hhHHHhhcCCceEEcccCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHH-hhCeeeeeecc
Q 038300 266 ESFLERTKERAMVIEGWAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVE-DVGIGLEVRRN 344 (401)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~-~~g~g~~l~~~ 344 (401)
+++.+++. .|+.+.+|+||.++|+|+++++|||||||||++|++++|||+|++|+++||+.||++++ +.|+|+.+
T Consensus 345 ~~~~~~~~-~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l--- 420 (482)
T 2pq6_A 345 SEFTNEIA-DRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEI--- 420 (482)
T ss_dssp HHHHHHHT-TTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC---
T ss_pred HhHHHhcC-CCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEE---
Confidence 88877764 46777899999999999999999999999999999999999999999999999999998 68999999
Q ss_pred CCCCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHh----hc--HHHHHHHHHHHHh
Q 038300 345 KCGRIQREEMARVIKEVVMEREGEKIKRKTREMGEKIKE----KG--EEEIEWVADELIH 398 (401)
Q Consensus 345 ~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~----~~--~~~~~~~v~~~~~ 398 (401)
+ ..+++++|+++|+++|+++++++||+||+++++.+++ +| .++++++|+++.+
T Consensus 421 ~-~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~ 479 (482)
T 2pq6_A 421 D-TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLL 479 (482)
T ss_dssp C-SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTTC
T ss_pred C-CCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHh
Confidence 4 5699999999999999843334799999999999987 45 7899999998753
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2.5e-48 Score=377.55 Aligned_cols=378 Identities=24% Similarity=0.347 Sum_probs=260.5
Q ss_pred CeEEEEEeCCccchhhhcccc--CCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHH-hhchHHHHHHHhh--c
Q 038300 3 NFHICFCSTPSILNSIKQLDK--FSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAF-DMASPSFFNILKN--L 77 (401)
Q Consensus 3 G~~Vt~~~~~~~~~~i~~~~~--~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~--~ 77 (401)
|++|||++++.+.+++.+... .+.+++|++++ +++|.+.+.. +.+......+...+ ..+...+.+++++ .
T Consensus 37 ~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~----~glp~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 111 (456)
T 2c1x_A 37 HAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDIS----DGVPEGYVFA-GRPQEDIELFTRAAPESFRQGMVMAVAETGR 111 (456)
T ss_dssp TSEEEEEECHHHHHHHC-------CTTEEEEECC----CCCCTTCCCC-CCTTHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CeEEEEEeCchhHHHhhccccccCCCceEEEeCC----CCCCCccccc-CChHHHHHHHHHHhHHHHHHHHHHHHhccCC
Confidence 577899999876665544210 12489999886 5676554321 12222223333333 2223334444433 4
Q ss_pred CCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcc-----c-CCC-CC--CCC-CCCCCCCCccccccccc
Q 038300 78 SPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIK-----K-NSL-GD--AND-DDEEFPSSSIFIHDYYM 147 (401)
Q Consensus 78 ~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~-----~-~~~-~~--~p~-~~~~~~~~~~~~~~~~~ 147 (401)
+|||||+|.++.|+..+|+++|||+|.++++++.....+.+... . .+. .. .++ ..++++......++..+
T Consensus 112 ~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~ 191 (456)
T 2c1x_A 112 PVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDELLNFIPGMSKVRFRDLQEGI 191 (456)
T ss_dssp CCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSCCTTCTTCBCTTSTTCTTCBGGGSCTTT
T ss_pred CceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCcccccccccccccCCCCCcccHHhCchhh
Confidence 89999999999999999999999999999998776554322110 0 000 00 000 01122222222232211
Q ss_pred cccCCCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCC-CCCCcccchHhhhhh---
Q 038300 148 KSYFSNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDP-VEQTDHEKGATEIIH--- 223 (401)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~-~~~~~~~~~~~~~l~--- 223 (401)
............+.+..+.+.+ ++++|+||+++||++.++++++.+ +++++|||+.... ....+++.+|.+||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~-~~~vl~ns~~~le~~~~~~~~~~~-~~~~~vGpl~~~~~~~~~~~~~~~~~wl~~~~ 269 (456)
T 2c1x_A 192 VFGNLNSLFSRMLHRMGQVLPK-ATAVFINSFEELDDSLTNDLKSKL-KTYLNIGPFNLITPPPVVPNTTGCLQWLKERK 269 (456)
T ss_dssp SSSCTTSHHHHHHHHHHHHGGG-SSCEEESSCGGGCHHHHHHHHHHS-SCEEECCCHHHHC---------CHHHHHHTSC
T ss_pred cCCCcccHHHHHHHHHHHhhhh-CCEEEECChHHHhHHHHHHHHhcC-CCEEEecCcccCcccccccchhhHHHHHhcCC
Confidence 1000000001223333344556 899999999999999988888877 4899999996532 110111234899998
Q ss_pred -----------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhhhcccC
Q 038300 224 -----------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMKILGHP 292 (401)
Q Consensus 224 -----------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~ 292 (401)
....+.+++.+++.+|+..+++|||+++... ...+|++|.++.. .|+.+.+|+||.++|+|+
T Consensus 270 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~------~~~l~~~~~~~~~-~~~~v~~w~pq~~vL~h~ 342 (456)
T 2c1x_A 270 PTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKA------RVHLPEGFLEKTR-GYGMVVPWAPQAEVLAHE 342 (456)
T ss_dssp TTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGG------GGGSCTTHHHHHT-TTEEEESCCCHHHHHTST
T ss_pred CcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcc------hhhCCHHHHhhcC-CceEEecCCCHHHHhcCC
Confidence 3345678899999999999999999987531 1247777777654 467777999999999999
Q ss_pred CcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhh-CeeeeeeccCCCCCCHHHHHHHHHHHhcCcccHHHH
Q 038300 293 SIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDV-GIGLEVRRNKCGRIQREEMARVIKEVVMEREGEKIK 371 (401)
Q Consensus 293 ~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~-g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~ 371 (401)
++++|||||||||++|++++|||+|++|++.||+.||+++++. |+|+.+ +.+.+++++|+++|+++|+++++++||
T Consensus 343 ~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l---~~~~~~~~~l~~~i~~ll~~~~~~~~r 419 (456)
T 2c1x_A 343 AVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI---EGGVFTKSGLMSCFDQILSQEKGKKLR 419 (456)
T ss_dssp TEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC---GGGSCCHHHHHHHHHHHHHSHHHHHHH
T ss_pred cCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEe---cCCCcCHHHHHHHHHHHHCCCcHHHHH
Confidence 9999999999999999999999999999999999999999999 999999 556789999999999999853345999
Q ss_pred HHHHHHHHHHHh----hc--HHHHHHHHHHHH
Q 038300 372 RKTREMGEKIKE----KG--EEEIEWVADELI 397 (401)
Q Consensus 372 ~~a~~~~~~~~~----~~--~~~~~~~v~~~~ 397 (401)
+||+++++.+++ +| .++++++|+++.
T Consensus 420 ~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~ 451 (456)
T 2c1x_A 420 ENLRALRETADRAVGPKGSSTENFITLVDLVS 451 (456)
T ss_dssp HHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHH
Confidence 999999999986 45 678999999874
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.8e-47 Score=372.49 Aligned_cols=373 Identities=26% Similarity=0.374 Sum_probs=265.1
Q ss_pred CeEEEEEeCCccch-----hhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhh-
Q 038300 3 NFHICFCSTPSILN-----SIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKN- 76 (401)
Q Consensus 3 G~~Vt~~~~~~~~~-----~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~- 76 (401)
||+|||++++.+.+ .+.+....+.+++|+++|.. .++. .+.... ... .+......+.+.+++++++
T Consensus 39 G~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~---~~~~-~~~~~~--~~~--~~~~~~~~~~~~~~~ll~~~ 110 (463)
T 2acv_A 39 NLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEV---EPPP-QELLKS--PEF--YILTFLESLIPHVKATIKTI 110 (463)
T ss_dssp TEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCC---CCCC-GGGGGS--HHH--HHHHHHHHTHHHHHHHHHHH
T ss_pred CcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCC---CCCc-ccccCC--ccH--HHHHHHHhhhHHHHHHHHhc
Confidence 99999999998642 22221012348999998722 1231 110111 111 1555666778899999987
Q ss_pred --cCCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcccC-CCCCC-------CCCCCCC-CCCccccccc
Q 038300 77 --LSPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKKN-SLGDA-------NDDDEEF-PSSSIFIHDY 145 (401)
Q Consensus 77 --~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~-~~~~~-------p~~~~~~-~~~~~~~~~~ 145 (401)
.+|||||+|.++.|+..+|+++|||++++++++++....+.+..... ...+. +...+++ +.+....++.
T Consensus 111 ~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~l~~ 190 (463)
T 2acv_A 111 LSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQLLNIPGISNQVPSNVLPD 190 (463)
T ss_dssp CCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCCCCCSSGGGCEECCTTCSSCEEGGGSCH
T ss_pred cCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccCCCCCccccCceeECCCCCCCCChHHCch
Confidence 58999999999999999999999999999999987766554332110 00000 0011112 2222222222
Q ss_pred cccccCCCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhc--CCCeeeecccCCCCC-C-CC---cccchH
Q 038300 146 YMKSYFSNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLI--KKKVVPVGPLVQDPV-E-QT---DHEKGA 218 (401)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~--~~~v~~vGPl~~~~~-~-~~---~~~~~~ 218 (401)
.+... .. . ...+.+....++. ++++++||+.+||++..+.+.+.. ++++++|||+..... . .. ..+.+|
T Consensus 191 ~~~~~-~~-~-~~~~~~~~~~~~~-~~~~l~nt~~ele~~~~~~l~~~~~p~~~v~~vGpl~~~~~~~~~~~~~~~~~~~ 266 (463)
T 2acv_A 191 ACFNK-DG-G-YIAYYKLAERFRD-TKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLI 266 (463)
T ss_dssp HHHCT-TT-H-HHHHHHHHHHHTT-SSEEEESCCHHHHHHHHHHHHHHCTTSCCEEECCCCCCSSCCCBTTBCHHHHHHH
T ss_pred hhcCC-ch-H-HHHHHHHHHhccc-CCEEEECCHHHHhHHHHHHHHhccccCCcEEEeCCCcccccccccccccccchhH
Confidence 12100 01 0 2222333445566 889999999999999888777655 568999999976421 1 01 122458
Q ss_pred hhhhh--------------Hh-CCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhh--cCCceEEcc
Q 038300 219 TEIIH--------------EY-FLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERT--KERAMVIEG 281 (401)
Q Consensus 219 ~~~l~--------------~~-~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 281 (401)
.+||+ .. .++.+++.+++.+|+..+++|||+++.. ...+|+++.+++ .+ ++.+.+
T Consensus 267 ~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~-------~~~l~~~~~~~~~~~~-~~~v~~ 338 (463)
T 2acv_A 267 LKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAE-------KKVFPEGFLEWMELEG-KGMICG 338 (463)
T ss_dssp HHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCC-------GGGSCTTHHHHHHHHC-SEEEES
T ss_pred HHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCC-------cccCChhHHHhhccCC-CEEEEc
Confidence 99998 33 5677889999999999999999998752 123677777666 44 556668
Q ss_pred cCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHH-HhhCeeeeee-ccCCC--CCCHHHHHHH
Q 038300 282 WAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLV-EDVGIGLEVR-RNKCG--RIQREEMARV 357 (401)
Q Consensus 282 ~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~-~~~g~g~~l~-~~~~~--~~~~~~l~~~ 357 (401)
|+||.++|+|+++++|||||||||++|++++|||+|++|+++||+.||+++ ++.|+|+.+. ..+.+ .+++++|+++
T Consensus 339 w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~a 418 (463)
T 2acv_A 339 WAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKG 418 (463)
T ss_dssp SCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHH
T ss_pred cCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHH
Confidence 999999999999999999999999999999999999999999999999995 7889999982 11124 6899999999
Q ss_pred HHHHhcCcccHHHHHHHHHHHHHHHh----hc--HHHHHHHHHHHH
Q 038300 358 IKEVVMEREGEKIKRKTREMGEKIKE----KG--EEEIEWVADELI 397 (401)
Q Consensus 358 i~~~l~~~~~~~~~~~a~~~~~~~~~----~~--~~~~~~~v~~~~ 397 (401)
|+++|++ +++||+||+++++.+++ +| .++++++|+++.
T Consensus 419 i~~ll~~--~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 419 LKDLMDK--DSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp HHHHTCT--TCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHHHHhc--cHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 9999962 57899999999999987 45 778999999874
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.3e-36 Score=294.05 Aligned_cols=350 Identities=17% Similarity=0.259 Sum_probs=234.6
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCch---HHHHHHHhhchHHHHHHHhhc
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLM---PTLKEAFDMASPSFFNILKNL 77 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~ 77 (401)
+|||+|||++++.+.+.+++. |++|++++ ++++.+.......+.+.. ..+......+.+.+.+++++.
T Consensus 38 ~~Gh~V~~~~~~~~~~~~~~~-----g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 108 (424)
T 2iya_A 38 ARGHRVSYAITDEFAAQVKAA-----GATPVVYD----SILPKESNPEESWPEDQESAMGLFLDEAVRVLPQLEDAYADD 108 (424)
T ss_dssp HTTCEEEEEECGGGHHHHHHH-----TCEEEECC----CCSCCTTCTTCCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred HCCCeEEEEeCHHHHHHHHhC-----CCEEEecC----ccccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 379999999999998888888 99999886 233322111011112222 223344445677888888889
Q ss_pred CCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcc-cCC---CCC---CCCCCCCCCCCcc--c-------
Q 038300 78 SPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIK-KNS---LGD---ANDDDEEFPSSSI--F------- 141 (401)
Q Consensus 78 ~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~-~~~---~~~---~p~~~~~~~~~~~--~------- 141 (401)
+|||||+|.++.|+..+|+++|||+|.+++.++........+.. ..+ .+. .|........... .
T Consensus 109 ~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (424)
T 2iya_A 109 RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTADRGEEAAAPAGTGDAEEGAEAEDGLVRFFT 188 (424)
T ss_dssp CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCCC---------------------HHHHHHHHH
T ss_pred CCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccccccccccccccccccccccchhhhccchhHHHHHH
Confidence 99999999988899999999999999999876422111111100 000 000 0100000000000 0
Q ss_pred cccccccccCCCCCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCCCCCCcccchHhhh
Q 038300 142 IHDYYMKSYFSNMVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDPVEQTDHEKGATEI 221 (401)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~ 221 (401)
.++.++. ..+. ... ....... ++.+|+++.++|+++ ...+++++++|||+...... ...|
T Consensus 189 ~~~~~~~--~~g~-~~~----~~~~~~~-~~~~l~~~~~~l~~~-----~~~~~~~~~~vGp~~~~~~~-------~~~~ 248 (424)
T 2iya_A 189 RLSAFLE--EHGV-DTP----ATEFLIA-PNRCIVALPRTFQIK-----GDTVGDNYTFVGPTYGDRSH-------QGTW 248 (424)
T ss_dssp HHHHHHH--HTTC-CSC----HHHHHHC-CSSEEESSCTTTSTT-----GGGCCTTEEECCCCCCCCGG-------GCCC
T ss_pred HHHHHHH--HcCC-CCC----HHHhccC-CCcEEEEcchhhCCC-----ccCCCCCEEEeCCCCCCccc-------CCCC
Confidence 0000000 0000 000 0111123 778999999999873 34567789999998643100 1123
Q ss_pred hh--------------HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhh
Q 038300 222 IH--------------EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMK 287 (401)
Q Consensus 222 l~--------------~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 287 (401)
++ ......+.+.+++++|+..+++++|+++..... .....+| .|+.+.+|+||.+
T Consensus 249 ~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~--~~~~~~~---------~~v~~~~~~~~~~ 317 (424)
T 2iya_A 249 EGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVDP--ADLGEVP---------PNVEVHQWVPQLD 317 (424)
T ss_dssp CCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSCG--GGGCSCC---------TTEEEESSCCHHH
T ss_pred CccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCCh--HHhccCC---------CCeEEecCCCHHH
Confidence 21 222346778889999988889999988753111 0001233 3889999999999
Q ss_pred hcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCccc
Q 038300 288 ILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMEREG 367 (401)
Q Consensus 288 ~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~ 367 (401)
+|+++++ ||||||+||++|++++|||+|++|...||+.||+++++.|+|+.+ ..+++++++|.++|+++|+ +
T Consensus 318 ~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~---~~~~~~~~~l~~~i~~ll~---~ 389 (424)
T 2iya_A 318 ILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHI---PRDQVTAEKLREAVLAVAS---D 389 (424)
T ss_dssp HHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEEC---CGGGCCHHHHHHHHHHHHH---C
T ss_pred HHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEc---CcCCCCHHHHHHHHHHHHc---C
Confidence 9999998 999999999999999999999999999999999999999999999 4457899999999999998 7
Q ss_pred HHHHHHHHHHHHHHHhhc-HHHHHHHHHHHHh
Q 038300 368 EKIKRKTREMGEKIKEKG-EEEIEWVADELIH 398 (401)
Q Consensus 368 ~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~~~ 398 (401)
++++++++++++.+++.+ .+.+.+.|+++..
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 390 PGVAERLAAVRQEIREAGGARAAADILEGILA 421 (424)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHh
Confidence 899999999999998855 6667777766543
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=6.7e-34 Score=272.67 Aligned_cols=320 Identities=14% Similarity=0.180 Sum_probs=193.8
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCC----CCCCCCCCC---CCCC---CchHHHHHHHhhchHHH
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPE----LPPQYHTTK---GLPP---HLMPTLKEAFDMASPSF 70 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~----l~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~l 70 (401)
+|||+|||++++.+...+ .. |+.++++. +..+. .+....... .... .+...+..........+
T Consensus 48 ~rGh~Vt~~t~~~~~~~~-~~-----g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 120 (400)
T 4amg_A 48 ALGHEVRYATGGDIRAVA-EA-----GLCAVDVS-PGVNYAKLFVPDDTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGA 120 (400)
T ss_dssp HTTCEEEEEECSSTHHHH-TT-----TCEEEESS-TTCCSHHHHSCCC------------CHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCEEEEEeCcchhhHH-hc-----CCeeEecC-CchhHhhhccccccccccccchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 489999999999886644 44 78888774 21110 010100000 0000 11122233344456678
Q ss_pred HHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCCCCCCCCCCCCCcccccccccccc
Q 038300 71 FNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDEEFPSSSIFIHDYYMKSY 150 (401)
Q Consensus 71 ~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 150 (401)
.+.+++.+||+||+|.+.+++..+|+++|||++.+...+...........
T Consensus 121 ~~~~~~~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~~------------------------------ 170 (400)
T 4amg_A 121 LRTARSWRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGALI------------------------------ 170 (400)
T ss_dssp HHHHHHHCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHHHH------------------------------
T ss_pred HHHHHhcCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhhHH------------------------------
Confidence 88888999999999999999999999999999987665432211111000
Q ss_pred CCCCCCchHHHHHHHHh----hccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCCCCCCcccchHhhhhh---
Q 038300 151 FSNMVESPTTKRLLQCF----ERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDPVEQTDHEKGATEIIH--- 223 (401)
Q Consensus 151 ~~~~~~~~~~~~~~~~~----~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~l~--- 223 (401)
...+.+..... .......+......+... .......+..+.+.+..... ... +..|++
T Consensus 171 ------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~---~~~~l~~~~ 235 (400)
T 4amg_A 171 ------RRAMSKDYERHGVTGEPTGSVRLTTTPPSVEAL---LPEDRRSPGAWPMRYVPYNG---GAV---LPDWLPPAA 235 (400)
T ss_dssp ------HHHTHHHHHHTTCCCCCSCEEEEECCCHHHHHT---SCGGGCCTTCEECCCCCCCC---CEE---CCTTCSCCT
T ss_pred ------HHHHHHHHHHhCCCcccccchhhcccCchhhcc---CcccccCCcccCcccccccc---ccc---CcccccccC
Confidence 00000000000 000111222221111100 00000011222222221110 000 112332
Q ss_pred --------HhC-----CCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhhhcc
Q 038300 224 --------EYF-----LSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMKILG 290 (401)
Q Consensus 224 --------~~~-----~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~ 290 (401)
.++ ...+.+.+++++++..+.+++|..+..... ....+|+ |+.+.+|+||.++|+
T Consensus 236 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~---~~~~~~~---------~v~~~~~~p~~~lL~ 303 (400)
T 4amg_A 236 GRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLA---LLGELPA---------NVRVVEWIPLGALLE 303 (400)
T ss_dssp TCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCC---CCCCCCT---------TEEEECCCCHHHHHT
T ss_pred CCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCcccc---ccccCCC---------CEEEEeecCHHHHhh
Confidence 111 122457788899999999999998753211 1233555 899999999999999
Q ss_pred cCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcccHHH
Q 038300 291 HPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMEREGEKI 370 (401)
Q Consensus 291 ~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 370 (401)
|+++ |||||||||++|++++|||+|++|+++||+.||+++++.|+|+.+ +..+.+++ +|+++|+ |++|
T Consensus 304 ~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l---~~~~~~~~----al~~lL~---d~~~ 371 (400)
T 4amg_A 304 TCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDA---EAGSLGAE----QCRRLLD---DAGL 371 (400)
T ss_dssp TCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEEC---CTTTCSHH----HHHHHHH---CHHH
T ss_pred hhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEc---CCCCchHH----HHHHHHc---CHHH
Confidence 9988 999999999999999999999999999999999999999999999 55666654 6677888 7999
Q ss_pred HHHHHHHHHHHHhhc-HHHHHHHHHHH
Q 038300 371 KRKTREMGEKIKEKG-EEEIEWVADEL 396 (401)
Q Consensus 371 ~~~a~~~~~~~~~~~-~~~~~~~v~~~ 396 (401)
|++|+++++.+++.+ ...+++.+++|
T Consensus 372 r~~a~~l~~~~~~~~~~~~~a~~le~l 398 (400)
T 4amg_A 372 REAALRVRQEMSEMPPPAETAAXLVAL 398 (400)
T ss_dssp HHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 999999999999876 65666666654
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=4.7e-33 Score=268.21 Aligned_cols=343 Identities=10% Similarity=0.079 Sum_probs=221.3
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhc-hHHHHHHHh-hcC
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMA-SPSFFNILK-NLS 78 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~-~~~ 78 (401)
+|||+|||++++.+.+.++.. |++|++++....+.+ ..... .....+...+... ...++++++ ..+
T Consensus 26 ~~Gh~V~~~~~~~~~~~v~~~-----g~~~~~i~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~ 93 (415)
T 1iir_A 26 DLGADVRMCAPPDCAERLAEV-----GVPHVPVGPSARAPI----QRAKP---LTAEDVRRFTTEAIATQFDEIPAAAEG 93 (415)
T ss_dssp HTTCEEEEEECGGGHHHHHHT-----TCCEEECCC-----------CCSC---CCHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HCCCeEEEEcCHHHHHHHHHc-----CCeeeeCCCCHHHHh----hcccc---cchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 379999999999988888887 999999872211111 11110 1111222222211 223444443 568
Q ss_pred CCEEEEcC-CCCc--HHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCCCCCCCCCCCCC-cccccccc-ccccCCC
Q 038300 79 PDLLIYDL-IQPW--APALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDEEFPSS-SIFIHDYY-MKSYFSN 153 (401)
Q Consensus 79 pD~vI~D~-~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~-~~~~~~~ 153 (401)
|||||+|. +..| +..+|+++|||+|.+++.++.....+ .++... +. .++.. ....+... .......
T Consensus 94 pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~-----~p~~~~-~~---~~~~~~~~n~~~~~~~~~~~~~ 164 (415)
T 1iir_A 94 CAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSPY-----YPPPPL-GE---PSTQDTIDIPAQWERNNQSAYQ 164 (415)
T ss_dssp CSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSS-----SCCCC-------------CHHHHHHHHHHHHHHH
T ss_pred CCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCcc-----cCCccC-Cc---cccchHHHHHHHHHHHHHHHHH
Confidence 99999997 6778 88999999999999988764321100 011110 10 00000 00000000 0000000
Q ss_pred CCCchHHHHH------------HHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCCCCCCcccchHhhh
Q 038300 154 MVESPTTKRL------------LQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDPVEQTDHEKGATEI 221 (401)
Q Consensus 154 ~~~~~~~~~~------------~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~ 221 (401)
.....+..+ .+.... . .+|+|++++|++. .+..+ ++++|||+...+. .....+|.+|
T Consensus 165 -~~~~~~~~~~~~~g~~~~~~~~~~~~~-~-~~l~~~~~~l~~~----~~~~~--~~~~vG~~~~~~~--~~~~~~~~~~ 233 (415)
T 1iir_A 165 -RYGGLLNSHRDAIGLPPVEDIFTFGYT-D-HPWVAADPVLAPL----QPTDL--DAVQTGAWILPDE--RPLSPELAAF 233 (415)
T ss_dssp -HHHHHHHHHHHHTTCCCCCCHHHHHHC-S-SCEECSCTTTSCC----CCCSS--CCEECCCCCCCCC--CCCCHHHHHH
T ss_pred -HhHHHHHHHHHHcCCCCCCccccccCC-C-CEEEeeChhhcCC----CcccC--CeEeeCCCccCcc--cCCCHHHHHH
Confidence 000000111 111122 3 6899999888751 11222 7899999976532 1112338899
Q ss_pred hh---------HhC--CCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhhhcc
Q 038300 222 IH---------EYF--LSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMKILG 290 (401)
Q Consensus 222 l~---------~~~--~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~ 290 (401)
|+ .++ ...+.+..++++|+..+++++|+++..... ...+++ |+.+.+|+||.++|+
T Consensus 234 l~~~~~~v~v~~Gs~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~----~~~~~~---------~v~~~~~~~~~~~l~ 300 (415)
T 1iir_A 234 LDAGPPPVYLGFGSLGAPADAVRVAIDAIRAHGRRVILSRGWADLV----LPDDGA---------DCFAIGEVNHQVLFG 300 (415)
T ss_dssp HHTSSCCEEEECC---CCHHHHHHHHHHHHHTTCCEEECTTCTTCC----CSSCGG---------GEEECSSCCHHHHGG
T ss_pred HhhCCCeEEEeCCCCCCcHHHHHHHHHHHHHCCCeEEEEeCCCccc----ccCCCC---------CEEEeCcCChHHHHh
Confidence 97 233 356677888899999999999998754211 122333 789999999999997
Q ss_pred cCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcccHHH
Q 038300 291 HPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMEREGEKI 370 (401)
Q Consensus 291 ~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 370 (401)
++++ ||||||+||++|++++|||+|++|+.+||..||+++++.|+|+.+ +..+++.++|.++|+++ + +++|
T Consensus 301 ~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~---~~~~~~~~~l~~~i~~l-~---~~~~ 371 (415)
T 1iir_A 301 RVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAH---DGPIPTFDSLSAALATA-L---TPET 371 (415)
T ss_dssp GSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC---SSSSCCHHHHHHHHHHH-T---SHHH
T ss_pred hCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccC---CcCCCCHHHHHHHHHHH-c---CHHH
Confidence 7777 999999999999999999999999999999999999999999998 55678999999999999 7 7999
Q ss_pred HHHHHHHHHHHHhhc-HHHHHHHHHHHH
Q 038300 371 KRKTREMGEKIKEKG-EEEIEWVADELI 397 (401)
Q Consensus 371 ~~~a~~~~~~~~~~~-~~~~~~~v~~~~ 397 (401)
+++++++++.++..+ .+.+.++++++.
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 399 (415)
T 1iir_A 372 HARATAVAGTIRTDGAAVAARLLLDAVS 399 (415)
T ss_dssp HHHHHHHHHHSCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcChHHHHHHHHHHHH
Confidence 999999998887644 666666666653
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.1e-32 Score=265.64 Aligned_cols=338 Identities=11% Similarity=0.091 Sum_probs=219.8
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHh--hcC
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILK--NLS 78 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--~~~ 78 (401)
+|||+|+|++++.+.+.++.. |++|++++.. ..+.... ... ......+..........+.+.+. ..+
T Consensus 26 ~~Gh~V~~~~~~~~~~~v~~~-----g~~~~~~~~~-~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 94 (416)
T 1rrv_A 26 ALGVQTRMCAPPAAEERLAEV-----GVPHVPVGLP-QHMMLQE--GMP---PPPPEEEQRLAAMTVEMQFDAVPGAAEG 94 (416)
T ss_dssp HTTCEEEEEECGGGHHHHHHH-----TCCEEECSCC-GGGCCCT--TSC---CCCHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HCCCeEEEEeCHHHHHHHHHc-----CCeeeecCCC-HHHHHhh--ccc---cchhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 379999999999988888888 9999988622 1111000 000 11111222222222223333333 568
Q ss_pred CCEEEEcC-CCCc--HHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCC-CCCCCCCCCCCcccc---ccccccccC
Q 038300 79 PDLLIYDL-IQPW--APALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGD-ANDDDEEFPSSSIFI---HDYYMKSYF 151 (401)
Q Consensus 79 pD~vI~D~-~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~---~~~~~~~~~ 151 (401)
||+||+|. +.++ +..+|+.+|||+|.+++.+....... .++.. .++. .. +..+... ........
T Consensus 95 pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~------~p~~~~~~~~-~~-r~~n~~~~~~~~~~~~~~- 165 (416)
T 1rrv_A 95 CAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASPH------LPPAYDEPTT-PG-VTDIRVLWEERAARFADR- 165 (416)
T ss_dssp CSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSS------SCCCBCSCCC-TT-CCCHHHHHHHHHHHHHHH-
T ss_pred CCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCCcc------cCCCCCCCCC-ch-HHHHHHHHHHHHHHHHHH-
Confidence 99999996 5566 88899999999999987753211100 00000 0110 00 0000000 00000000
Q ss_pred CCCCCchHHHHH------------HHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCCCCCCcccchHh
Q 038300 152 SNMVESPTTKRL------------LQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDPVEQTDHEKGAT 219 (401)
Q Consensus 152 ~~~~~~~~~~~~------------~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~ 219 (401)
. ......+ .+.... . .+++|+.++|+++ +..+ ++++|||+..++.. ....++.
T Consensus 166 -~---~~~~~~~~~~~g~~~~~~~~~~~~~-~-~~l~~~~~~l~~~-----~~~~--~~~~vG~~~~~~~~--~~~~~~~ 230 (416)
T 1rrv_A 166 -Y---GPTLNRRRAEIGLPPVEDVFGYGHG-E-RPLLAADPVLAPL-----QPDV--DAVQTGAWLLSDER--PLPPELE 230 (416)
T ss_dssp -H---HHHHHHHHHHTTCCCCSCHHHHTTC-S-SCEECSCTTTSCC-----CSSC--CCEECCCCCCCCCC--CCCHHHH
T ss_pred -h---HHHHHHHHHHcCCCCCCchhhhccC-C-CeEEccCccccCC-----CCCC--CeeeECCCccCccC--CCCHHHH
Confidence 0 0000111 111222 4 7899999998862 2222 78999999765311 1123388
Q ss_pred hhhh---------HhCC----CHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchh
Q 038300 220 EIIH---------EYFL----SKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQM 286 (401)
Q Consensus 220 ~~l~---------~~~~----~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 286 (401)
+||+ .++. ..+.+.+++++|+..+++++|+++..... ...+|+ |+.+.+|+||.
T Consensus 231 ~~l~~~~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~----~~~~~~---------~v~~~~~~~~~ 297 (416)
T 1rrv_A 231 AFLAAGSPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTELV----LPDDRD---------DCFAIDEVNFQ 297 (416)
T ss_dssp HHHHSSSCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCC----CSCCCT---------TEEEESSCCHH
T ss_pred HHHhcCCCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCCcccc----ccCCCC---------CEEEeccCChH
Confidence 8997 2333 24567888899999999999998754211 112333 78899999999
Q ss_pred hhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcc
Q 038300 287 KILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMERE 366 (401)
Q Consensus 287 ~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~ 366 (401)
++|+++++ ||||||+||++||+++|||+|++|+..||+.||+++++.|+|+.+ ...+.++++|.++|+++ +
T Consensus 298 ~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~---~~~~~~~~~l~~~i~~l-~--- 368 (416)
T 1rrv_A 298 ALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAH---DGPTPTFESLSAALTTV-L--- 368 (416)
T ss_dssp HHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEEC---SSSCCCHHHHHHHHHHH-T---
T ss_pred HHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCC---CCCCCCHHHHHHHHHHh-h---
Confidence 99988887 999999999999999999999999999999999999999999998 55678999999999999 7
Q ss_pred cHHHHHHHHHHHHHHHhhc-HHHHHHHH-HHH
Q 038300 367 GEKIKRKTREMGEKIKEKG-EEEIEWVA-DEL 396 (401)
Q Consensus 367 ~~~~~~~a~~~~~~~~~~~-~~~~~~~v-~~~ 396 (401)
+++|+++++++++.+++.+ . .+.+.+ +++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~-~~~~~i~e~~ 399 (416)
T 1rrv_A 369 APETRARAEAVAGMVLTDGAA-AAADLVLAAV 399 (416)
T ss_dssp SHHHHHHHHHHTTTCCCCHHH-HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhcCcH-HHHHHHHHHH
Confidence 7999999999988877644 6 666665 655
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=8.4e-32 Score=259.40 Aligned_cols=352 Identities=14% Similarity=0.196 Sum_probs=227.6
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCC---CCCCCCCCchHH-HHHHHhhchHHHHHHHhh
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYH---TTKGLPPHLMPT-LKEAFDMASPSFFNILKN 76 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~ 76 (401)
+|||+|+|++++.+.+.++.. |++|++++.+ ++.... .....+...... +......+...+.+++++
T Consensus 46 ~~Gh~V~v~~~~~~~~~~~~~-----G~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 116 (415)
T 3rsc_A 46 RRGHRVSYVTAGGFAEPVRAA-----GATVVPYQSE----IIDADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEALDG 116 (415)
T ss_dssp HTTCEEEEEECGGGHHHHHHT-----TCEEEECCCS----TTTCCHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HCCCEEEEEeCHHHHHHHHhc-----CCEEEecccc----ccccccchhhccccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 379999999999999999988 9999988622 111100 001111111122 333444456788889999
Q ss_pred cCCCEEEEc-CCCCcHHHHHHhcCCCeEEEeccchHHHHHhh--hhcccCCCCCCCCCCCCCCCCccccccccccccCCC
Q 038300 77 LSPDLLIYD-LIQPWAPALASSLNIPAVYFLVSSAATSAFMF--HAIKKNSLGDANDDDEEFPSSSIFIHDYYMKSYFSN 153 (401)
Q Consensus 77 ~~pD~vI~D-~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 153 (401)
.+||+||+| +...++..+|+++|||+|.+.+.......... .......... |. ..... ...+..+.. ..+
T Consensus 117 ~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~-p~---~~~~~-~~~~~~~~~--~~g 189 (415)
T 3rsc_A 117 DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSFSQDMVTLAGTID-PL---DLPVF-RDTLRDLLA--EHG 189 (415)
T ss_dssp SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCHHHHHHHHHTCCC-GG---GCHHH-HHHHHHHHH--HTT
T ss_pred cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCccccccccccccccCC-hh---hHHHH-HHHHHHHHH--HcC
Confidence 999999999 88888999999999999998765321100000 0000000000 00 00000 000111111 001
Q ss_pred CCCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCC-C-C----CCcccchHhhhhh-HhC
Q 038300 154 MVESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDP-V-E----QTDHEKGATEIIH-EYF 226 (401)
Q Consensus 154 ~~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~-~-~----~~~~~~~~~~~l~-~~~ 226 (401)
. .. ... .......+..++.+.+++++ ....++.++.++||+.... . . ..++...+.-.+. ...
T Consensus 190 ~-~~-~~~---~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~v~v~~Gs~~~ 259 (415)
T 3rsc_A 190 L-SR-SVV---DCWNHVEQLNLVFVPKAFQI-----AGDTFDDRFVFVGPCFDDRRFLGEWTRPADDLPVVLVSLGTTFN 259 (415)
T ss_dssp C-CC-CHH---HHHTCCCSEEEESSCTTTST-----TGGGCCTTEEECCCCCCCCGGGCCCCCCSSCCCEEEEECTTTSC
T ss_pred C-CC-Chh---hhhcCCCCeEEEEcCcccCC-----CcccCCCceEEeCCCCCCcccCcCccccCCCCCEEEEECCCCCC
Confidence 0 00 001 11122137788877666664 5666778899999986542 0 0 0000000000000 122
Q ss_pred CCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhhhcccCCcceEEecCCchhH
Q 038300 227 LSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMKILGHPSIGGFVSHCGWSSV 306 (401)
Q Consensus 227 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~i~hgG~~s~ 306 (401)
...+.+..+++++...+.+++|.++..... .....++ .|+.+.+|+|+.++|+++++ ||||||+||+
T Consensus 260 ~~~~~~~~~~~al~~~~~~~v~~~g~~~~~--~~l~~~~---------~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~ 326 (415)
T 3rsc_A 260 DRPGFFRDCARAFDGQPWHVVMTLGGQVDP--AALGDLP---------PNVEAHRWVPHVKVLEQATV--CVTHGGMGTL 326 (415)
T ss_dssp CCHHHHHHHHHHHTTSSCEEEEECTTTSCG--GGGCCCC---------TTEEEESCCCHHHHHHHEEE--EEESCCHHHH
T ss_pred ChHHHHHHHHHHHhcCCcEEEEEeCCCCCh--HHhcCCC---------CcEEEEecCCHHHHHhhCCE--EEECCcHHHH
Confidence 345678888999988889999988743111 1111233 38999999999999999999 9999999999
Q ss_pred HHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc-
Q 038300 307 MESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG- 385 (401)
Q Consensus 307 ~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~- 385 (401)
+|++++|+|+|++|...||..||+++++.|+|+.+ ..+++++++|.++|+++|+ +++++++++++++.+.+.+
T Consensus 327 ~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~---~~~~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~~ 400 (415)
T 3rsc_A 327 MEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVL---PGEKADGDTLLAAVGAVAA---DPALLARVEAMRGHVRRAGG 400 (415)
T ss_dssp HHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEEC---CGGGCCHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEc---ccCCCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHhcCH
Confidence 99999999999999999999999999999999999 5567899999999999998 7999999999999998865
Q ss_pred HHHHHHHHHHHH
Q 038300 386 EEEIEWVADELI 397 (401)
Q Consensus 386 ~~~~~~~v~~~~ 397 (401)
.+.+.+.++++.
T Consensus 401 ~~~~~~~i~~~~ 412 (415)
T 3rsc_A 401 AARAADAVEAYL 412 (415)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 666666665553
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.98 E-value=6.5e-31 Score=252.22 Aligned_cols=340 Identities=13% Similarity=0.114 Sum_probs=221.0
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhcCCC
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNLSPD 80 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD 80 (401)
+|||+|+|++++.+.+.+++. |+.|++++ +..+.+. .. .......+...+..........+.++++ +||
T Consensus 26 ~~Gh~V~v~~~~~~~~~v~~~-----g~~~~~l~-~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~pD 94 (404)
T 3h4t_A 26 ELGADARMCLPPDYVERCAEV-----GVPMVPVG-RAVRAGA-RE--PGELPPGAAEVVTEVVAEWFDKVPAAIE--GCD 94 (404)
T ss_dssp HTTCCEEEEECGGGHHHHHHT-----TCCEEECS-SCSSGGG-SC--TTCCCTTCGGGHHHHHHHHHHHHHHHHT--TCS
T ss_pred HCCCeEEEEeCHHHHHHHHHc-----CCceeecC-CCHHHHh-cc--ccCCHHHHHHHHHHHHHHHHHHHHHHhc--CCC
Confidence 489999999999999999988 99999986 2211110 00 0001122333344444444555555553 699
Q ss_pred EEEEcCCCCcH---HHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCCCCCCCCCCCCCccccccccccccCCCCCCc
Q 038300 81 LLIYDLIQPWA---PALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDEEFPSSSIFIHDYYMKSYFSNMVES 157 (401)
Q Consensus 81 ~vI~D~~~~~~---~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (401)
+||+|..+..+ ..+|+++|||++.+..++....+...+......... ..+.+. ..++.+.. ..+....
T Consensus 95 ~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~--~lgl~~~ 165 (404)
T 3h4t_A 95 AVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQG------ADRLFG-DAVNSHRA--SIGLPPV 165 (404)
T ss_dssp EEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHH------HHHHHH-HHHHHHHH--HTTCCCC
T ss_pred EEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHHH------HHHHhH-HHHHHHHH--HcCCCCC
Confidence 99999654555 688999999999988776421110000000000000 000000 00000000 0000000
Q ss_pred hHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCC-CCCCcccchHhhhhh---------HhCC
Q 038300 158 PTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDP-VEQTDHEKGATEIIH---------EYFL 227 (401)
Q Consensus 158 ~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~-~~~~~~~~~~~~~l~---------~~~~ 227 (401)
.. ..+. .. .+..+.++.+.+.+ .+.++.++.++|++..+. ....+. +.+|++ .++.
T Consensus 166 ~~---~~~~-~~-~~~~l~~~~~~l~p------~~~~~~~~~~~G~~~~~~~~~~~~~---l~~~l~~~~~~Vlv~~Gs~ 231 (404)
T 3h4t_A 166 EH---LYDY-GY-TDQPWLAADPVLSP------LRPTDLGTVQTGAWILPDQRPLSAE---LEGFLRAGSPPVYVGFGSG 231 (404)
T ss_dssp CC---HHHH-HH-CSSCEECSCTTTSC------CCTTCCSCCBCCCCCCCCCCCCCHH---HHHHHHTSSCCEEECCTTS
T ss_pred cc---hhhc-cc-cCCeEEeeCcceeC------CCCCCCCeEEeCccccCCCCCCCHH---HHHHHhcCCCeEEEECCCC
Confidence 00 0011 01 33346677666654 223556888999886543 222223 778886 2222
Q ss_pred --CHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhhhcccCCcceEEecCCchh
Q 038300 228 --SKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMKILGHPSIGGFVSHCGWSS 305 (401)
Q Consensus 228 --~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~i~hgG~~s 305 (401)
..+.+..++++++..++++||+.+..... ...+ ..|+.+.+|+||.++|+++++ ||||||+||
T Consensus 232 ~~~~~~~~~~~~al~~~~~~vv~~~g~~~~~----~~~~---------~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t 296 (404)
T 3h4t_A 232 PAPAEAARVAIEAVRAQGRRVVLSSGWAGLG----RIDE---------GDDCLVVGEVNHQVLFGRVAA--VVHHGGAGT 296 (404)
T ss_dssp CCCTTHHHHHHHHHHHTTCCEEEECTTTTCC----CSSC---------CTTEEEESSCCHHHHGGGSSE--EEECCCHHH
T ss_pred CCcHHHHHHHHHHHHhCCCEEEEEeCCcccc----cccC---------CCCEEEecCCCHHHHHhhCcE--EEECCcHHH
Confidence 55678889999999999999998753211 0112 338999999999999998888 999999999
Q ss_pred HHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc
Q 038300 306 VMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG 385 (401)
Q Consensus 306 ~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~ 385 (401)
++|++++|||+|++|+.+||+.||+++++.|+|+.+ ...++++++|.++|+++++ ++|+++++++++.+++.|
T Consensus 297 ~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l---~~~~~~~~~l~~ai~~ll~----~~~~~~~~~~~~~~~~~~ 369 (404)
T 3h4t_A 297 TTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAH---DGPTPTVESLSAALATALT----PGIRARAAAVAGTIRTDG 369 (404)
T ss_dssp HHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC---SSSSCCHHHHHHHHHHHTS----HHHHHHHHHHHTTCCCCH
T ss_pred HHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEecc---CcCCCCHHHHHHHHHHHhC----HHHHHHHHHHHHHHhhhH
Confidence 999999999999999999999999999999999999 5677899999999999995 689999999999888844
Q ss_pred HHHHHHHHHHH
Q 038300 386 EEEIEWVADEL 396 (401)
Q Consensus 386 ~~~~~~~v~~~ 396 (401)
.+.+.++|+++
T Consensus 370 ~~~~~~~i~~~ 380 (404)
T 3h4t_A 370 TTVAAKLLLEA 380 (404)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66666666555
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.98 E-value=6.5e-31 Score=251.87 Aligned_cols=352 Identities=13% Similarity=0.188 Sum_probs=225.2
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHH----HHHHHhhchHHHHHHHhh
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPT----LKEAFDMASPSFFNILKN 76 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~ 76 (401)
+|||+|+|++++.+.+.++.. |++|++++.+ ++................ +......+...+.+.+++
T Consensus 30 ~~GheV~v~~~~~~~~~~~~~-----G~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 100 (402)
T 3ia7_A 30 RRGHRITYVTTPLFADEVKAA-----GAEVVLYKSE----FDTFHVPEVVKQEDAETQLHLVYVRENVAILRAAEEALGD 100 (402)
T ss_dssp HTTCEEEEEECHHHHHHHHHT-----TCEEEECCCG----GGTSSSSSSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hCCCEEEEEcCHHHHHHHHHc-----CCEEEecccc----cccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 379999999999999999888 9999988622 111110000111122221 233333456778888999
Q ss_pred cCCCEEEEc-CCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcc-cCCCCCCCCCCCCCCCCccccccccccccCCCC
Q 038300 77 LSPDLLIYD-LIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIK-KNSLGDANDDDEEFPSSSIFIHDYYMKSYFSNM 154 (401)
Q Consensus 77 ~~pD~vI~D-~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (401)
.+||+||+| .+..++..+|+++|||+|.+.+...........+.. .......|. ..... ...+..+.. ..+.
T Consensus 101 ~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~--~~g~ 174 (402)
T 3ia7_A 101 NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKSNGQRHPA---DVEAV-HSVLVDLLG--KYGV 174 (402)
T ss_dssp CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCHHHHHHHHHTCCCGG---GSHHH-HHHHHHHHH--TTTC
T ss_pred cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccccccccccccccChh---hHHHH-HHHHHHHHH--HcCC
Confidence 999999999 888889999999999999987543321100000000 000000000 00000 000111111 1110
Q ss_pred CCchHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCCCCCC-----cccchHhhhhh---HhC
Q 038300 155 VESPTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDPVEQT-----DHEKGATEIIH---EYF 226 (401)
Q Consensus 155 ~~~~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~~~~~-----~~~~~~~~~l~---~~~ 226 (401)
.. ....+ .....+..++.+.+++++ ....++.++.++||+........ .++... -.+. ...
T Consensus 175 -~~-~~~~~---~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~-v~v~~G~~~~ 243 (402)
T 3ia7_A 175 -DT-PVKEY---WDEIEGLTIVFLPKSFQP-----FAETFDERFAFVGPTLTGRDGQPGWQPPRPDAPV-LLVSLGNQFN 243 (402)
T ss_dssp -CS-CHHHH---HTCCCSCEEESSCGGGST-----TGGGCCTTEEECCCCCCC----CCCCCSSTTCCE-EEEECCSCSS
T ss_pred -CC-Chhhh---hcCCCCeEEEEcChHhCC-----ccccCCCCeEEeCCCCCCcccCCCCcccCCCCCE-EEEECCCCCc
Confidence 00 00111 122126777777666664 45566788999999865420000 000000 0111 122
Q ss_pred CCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhhhcccCCcceEEecCCchhH
Q 038300 227 LSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMKILGHPSIGGFVSHCGWSSV 306 (401)
Q Consensus 227 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~i~hgG~~s~ 306 (401)
...+.+..+++++...+.+++|.++..... .....++ .|+.+.+|+|+.++|+++++ ||||||+||+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~---------~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~ 310 (402)
T 3ia7_A 244 EHPEFFRACAQAFADTPWHVVMAIGGFLDP--AVLGPLP---------PNVEAHQWIPFHSVLAHARA--CLTHGTTGAV 310 (402)
T ss_dssp CCHHHHHHHHHHHTTSSCEEEEECCTTSCG--GGGCSCC---------TTEEEESCCCHHHHHTTEEE--EEECCCHHHH
T ss_pred chHHHHHHHHHHHhcCCcEEEEEeCCcCCh--hhhCCCC---------CcEEEecCCCHHHHHhhCCE--EEECCCHHHH
Confidence 334578888999988888999988743111 1111233 38999999999999999998 9999999999
Q ss_pred HHHHHhCCcEEecCC-ccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc
Q 038300 307 MESMRLGVPIIAMPM-HVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG 385 (401)
Q Consensus 307 ~eal~~GvP~i~~P~-~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~ 385 (401)
+|++++|+|+|++|. ..||..||+++++.|+|+.+ ..+++++++|.++|+++|+ +++++++++++++.+.+.+
T Consensus 311 ~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~---~~~~~~~~~l~~~~~~ll~---~~~~~~~~~~~~~~~~~~~ 384 (402)
T 3ia7_A 311 LEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVL---RPDQLEPASIREAVERLAA---DSAVRERVRRMQRDILSSG 384 (402)
T ss_dssp HHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEEC---CGGGCSHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEc---cCCCCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHhhCC
Confidence 999999999999999 99999999999999999999 5567899999999999998 7999999999999998865
Q ss_pred -HHHHHHHHHHHH
Q 038300 386 -EEEIEWVADELI 397 (401)
Q Consensus 386 -~~~~~~~v~~~~ 397 (401)
.+.+.+.++++.
T Consensus 385 ~~~~~~~~i~~~~ 397 (402)
T 3ia7_A 385 GPARAADEVEAYL 397 (402)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 566666655543
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.97 E-value=2.7e-30 Score=250.03 Aligned_cols=350 Identities=15% Similarity=0.203 Sum_probs=218.4
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchH---HHHHHHhhchHHHHHHHhhc
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMP---TLKEAFDMASPSFFNILKNL 77 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~ 77 (401)
++||+|++++++...+.+... |++|++++. .++.........+..+.. .+...+..+...+.+++++.
T Consensus 33 ~~G~~V~~~~~~~~~~~~~~~-----g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 103 (430)
T 2iyf_A 33 ARGHRVTYAIPPVFADKVAAT-----GPRPVLYHS----TLPGPDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYADD 103 (430)
T ss_dssp HTTCEEEEEECGGGHHHHHTT-----SCEEEECCC----CSCCTTSCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HCCCeEEEEeCHHHHHHHHhC-----CCEEEEcCC----cCccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 379999999999987777777 999998761 222111110000112222 22233444567788899999
Q ss_pred CCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCCCCCCCCCCCCCccccccccccccCCCCCCc
Q 038300 78 SPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDEEFPSSSIFIHDYYMKSYFSNMVES 157 (401)
Q Consensus 78 ~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (401)
+||+||+|.+..++..+|+++|||+|.+++...........+.........+. ...... ...++.++.. .+ +..
T Consensus 104 ~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~--~g-~~~ 177 (430)
T 2iyf_A 104 IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWREPRQT--ERGRAY-YARFEAWLKE--NG-ITE 177 (430)
T ss_dssp CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHHHHHHS--HHHHHH-HHHHHHHHHH--TT-CCS
T ss_pred CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchhhhhccc--hHHHHH-HHHHHHHHHH--hC-CCC
Confidence 99999999887789999999999999998764311100000000000000000 000000 0000001100 00 000
Q ss_pred hHHHHHHHHhhccccEEEEcChhHhhHHHHHHHHhhcCCC-eeeecccCCCCC-----CCCcccchHhhhhhHhC---CC
Q 038300 158 PTTKRLLQCFERSCNIVLIKSFRELEGKYIDYLSDLIKKK-VVPVGPLVQDPV-----EQTDHEKGATEIIHEYF---LS 228 (401)
Q Consensus 158 ~~~~~~~~~~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~-v~~vGPl~~~~~-----~~~~~~~~~~~~l~~~~---~~ 228 (401)
. ..+.... ++.+++++.+++++. ...++++ +++|||+..... ....++... -++..+. ..
T Consensus 178 ~----~~~~~~~-~~~~l~~~~~~~~~~-----~~~~~~~~v~~vG~~~~~~~~~~~~~~~~~~~~~-v~v~~Gs~~~~~ 246 (430)
T 2iyf_A 178 H----PDTFASH-PPRSLVLIPKALQPH-----ADRVDEDVYTFVGACQGDRAEEGGWQRPAGAEKV-VLVSLGSAFTKQ 246 (430)
T ss_dssp C----HHHHHHC-CSSEEECSCGGGSTT-----GGGSCTTTEEECCCCC-----CCCCCCCTTCSEE-EEEECTTTCC-C
T ss_pred C----HHHHhcC-CCcEEEeCcHHhCCC-----cccCCCccEEEeCCcCCCCCCCCCCccccCCCCe-EEEEcCCCCCCc
Confidence 0 0111223 788999998888862 2345667 999998653210 000000000 0111122 24
Q ss_pred HHHHHHHHHHHHhC-CCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhhhcccCCcceEEecCCchhHH
Q 038300 229 KEEMEDIALGLELS-GVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMKILGHPSIGGFVSHCGWSSVM 307 (401)
Q Consensus 229 ~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~i~hgG~~s~~ 307 (401)
.+.+.+++++++.. +.+++|+++..... .....++ .|+.+.+|+||.++|+++++ ||+|||+||++
T Consensus 247 ~~~~~~~~~~l~~~~~~~~~~~~G~~~~~--~~l~~~~---------~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~ 313 (430)
T 2iyf_A 247 PAFYRECVRAFGNLPGWHLVLQIGRKVTP--AELGELP---------DNVEVHDWVPQLAILRQADL--FVTHAGAGGSQ 313 (430)
T ss_dssp HHHHHHHHHHHTTCTTEEEEEECC---CG--GGGCSCC---------TTEEEESSCCHHHHHTTCSE--EEECCCHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEeCCCCCh--HHhccCC---------CCeEEEecCCHHHHhhccCE--EEECCCccHHH
Confidence 56788888999875 78898988753111 0001122 38899999999999999998 99999999999
Q ss_pred HHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc-H
Q 038300 308 ESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG-E 386 (401)
Q Consensus 308 eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~-~ 386 (401)
||+++|+|+|++|..+||..||+++++.|+|+.+ ..++++.++|.++|+++++ ++++++++.++++.+.+.+ .
T Consensus 314 Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~---~~~~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~~~ 387 (430)
T 2iyf_A 314 EGLATATPMIAVPQAVDQFGNADMLQGLGVARKL---ATEEATADLLRETALALVD---DPEVARRLRRIQAEMAQEGGT 387 (430)
T ss_dssp HHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEEC---CCC-CCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHhCCCEEECCCccchHHHHHHHHHcCCEEEc---CCCCCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHhcCcH
Confidence 9999999999999999999999999999999998 5567899999999999998 7899999999998887655 4
Q ss_pred HHHHHHHHH
Q 038300 387 EEIEWVADE 395 (401)
Q Consensus 387 ~~~~~~v~~ 395 (401)
+.+.+.+++
T Consensus 388 ~~~~~~i~~ 396 (430)
T 2iyf_A 388 RRAADLIEA 396 (430)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 444444433
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.97 E-value=3.9e-29 Score=238.31 Aligned_cols=319 Identities=13% Similarity=0.168 Sum_probs=212.9
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCC-C-CCCCC-CC-CchHH-----HHHHHhhchHHHH
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQY-H-TTKGL-PP-HLMPT-----LKEAFDMASPSFF 71 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~-~-~~~~~-~~-~~~~~-----~~~~~~~~~~~l~ 71 (401)
++||+|+|++++.+.+.++.. |++|++++....++..... . ..... +. ..... +..........+.
T Consensus 26 ~~Gh~V~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 100 (384)
T 2p6p_A 26 NAGHQVVMAANQDMGPVVTGV-----GLPAVATTDLPIRHFITTDREGRPEAIPSDPVAQARFTGRWFARMAASSLPRML 100 (384)
T ss_dssp HTTCEEEEEECGGGHHHHHHT-----TCCEEESCSSCHHHHHHBCTTSCBCCCCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCEEEEEeCHHHHHHHHhC-----CCEEEEeCCcchHHHHhhhcccCccccCcchHHHHHHHHHHHHhhHHHHHHHHH
Confidence 379999999999887777777 9999988621100000000 0 00000 10 11111 1122233456777
Q ss_pred HHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCCCCCCCCCCCCCccccccccccccC
Q 038300 72 NILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDEEFPSSSIFIHDYYMKSYF 151 (401)
Q Consensus 72 ~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 151 (401)
+++++.+||+||+|.+..++..+|+.+|||+|.+...+.. + ..+ ... .
T Consensus 101 ~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~-----------------~---~~~-------~~~-~---- 148 (384)
T 2p6p_A 101 DFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD-----------------A---DGI-------HPG-A---- 148 (384)
T ss_dssp HHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC-----------------C---TTT-------HHH-H----
T ss_pred HHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc-----------------c---chh-------hHH-H----
Confidence 8888889999999988888999999999999988643110 0 000 000 0
Q ss_pred CCCCCchHHHHHHHHhhc----cccEEEEcChhHhhHHHHHHHHhhcC-CCeeeecccCCCCCCCCcccchHhhhhh---
Q 038300 152 SNMVESPTTKRLLQCFER----SCNIVLIKSFRELEGKYIDYLSDLIK-KKVVPVGPLVQDPVEQTDHEKGATEIIH--- 223 (401)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~----~a~~~Lvns~~eLe~~~~~~~~~~~~-~~v~~vGPl~~~~~~~~~~~~~~~~~l~--- 223 (401)
...+.++...+.. .++.+++++.+.++++ .+ ++ .++.++++ ... .. +.+|++
T Consensus 149 -----~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-----~~-~~~~~~~~~~~-~~~-----~~---~~~~l~~~~ 208 (384)
T 2p6p_A 149 -----DAELRPELSELGLERLPAPDLFIDICPPSLRPA-----NA-APARMMRHVAT-SRQ-----CP---LEPWMYTRD 208 (384)
T ss_dssp -----HHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT-----TS-CCCEECCCCCC-CCC-----CB---CCHHHHCCC
T ss_pred -----HHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC-----CC-CCCCceEecCC-CCC-----CC---CCchhhcCC
Confidence 0111112221110 0568899998887752 11 22 23444432 110 11 334553
Q ss_pred --------HhCC--------CHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhh
Q 038300 224 --------EYFL--------SKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMK 287 (401)
Q Consensus 224 --------~~~~--------~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 287 (401)
.+++ +.+.+..++++|...+++++|+++.. ..+.+. . .+.|+.+ +|+||.+
T Consensus 209 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~----------~~~~l~-~-~~~~v~~-~~~~~~~ 275 (384)
T 2p6p_A 209 TRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDT----------VAEALR-A-EVPQARV-GWTPLDV 275 (384)
T ss_dssp SSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHH----------HHHHHH-H-HCTTSEE-ECCCHHH
T ss_pred CCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCC----------CHHhhC-C-CCCceEE-cCCCHHH
Confidence 2222 22567888999988899999987631 001111 1 2458889 9999999
Q ss_pred hcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCccc
Q 038300 288 ILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMEREG 367 (401)
Q Consensus 288 ~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~ 367 (401)
+|+++++ ||||||+||++||+++|+|+|++|...||..||+++++.|+|+.+ ..+..+.++|.++|+++|+ +
T Consensus 276 ~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~---~~~~~~~~~l~~~i~~ll~---~ 347 (384)
T 2p6p_A 276 VAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIAL---LPGEDSTEAIADSCQELQA---K 347 (384)
T ss_dssp HGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEEC---CTTCCCHHHHHHHHHHHHH---C
T ss_pred HHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEec---CcCCCCHHHHHHHHHHHHc---C
Confidence 9988888 999999999999999999999999999999999999999999998 5567899999999999998 7
Q ss_pred HHHHHHHHHHHHHHHhhc-HHHHHHHHHHHH
Q 038300 368 EKIKRKTREMGEKIKEKG-EEEIEWVADELI 397 (401)
Q Consensus 368 ~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~~ 397 (401)
++++++++++++.+++.+ .+.+.+.++.+.
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 348 DTYARRAQDLSREISGMPLPATVVTALEQLA 378 (384)
T ss_dssp HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 999999999999999866 666666666654
No 15
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.96 E-value=1.5e-28 Score=238.49 Aligned_cols=334 Identities=14% Similarity=0.155 Sum_probs=209.0
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCC--CCCCCCC-CC------CCC----CC-CchHH-------H
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLP--ELPPQYH-TT------KGL----PP-HLMPT-------L 59 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~--~l~~~~~-~~------~~~----~~-~~~~~-------~ 59 (401)
++||+|+|++++.+.+.++.. |++|++++.. .+ ++..... .. .+. +. ..... +
T Consensus 46 ~~GheV~~~~~~~~~~~v~~~-----G~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (441)
T 2yjn_A 46 AAGHEVRVVASPALTEDITAA-----GLTAVPVGTD-VDLVDFMTHAGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVL 119 (441)
T ss_dssp HTTCEEEEEECGGGHHHHHTT-----TCCEEECSCC-CCHHHHHHHTTHHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHH
T ss_pred HCCCeEEEEeCchhHHHHHhC-----CCceeecCCc-cchHHHhhhhhcccccccccccccccCcchhhhhhhhhHHHHH
Confidence 379999999999988888888 9999988621 10 1100000 00 000 10 01111 1
Q ss_pred HHHHh-----h-chHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCCCCCCCC
Q 038300 60 KEAFD-----M-ASPSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDE 133 (401)
Q Consensus 60 ~~~~~-----~-~~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 133 (401)
..... . ....+.+++++.+||+||+|.+..++..+|+.+|||+|.+...+............. .++.|...
T Consensus 120 ~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~aA~~lgiP~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~- 196 (441)
T 2yjn_A 120 TPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEPLTFAAPIAAAVTGTPHARLLWGPDITTRARQNFLGL--LPDQPEEH- 196 (441)
T ss_dssp HHHTTTTSSCHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHHTCCEEEECSSCCHHHHHHHHHHHH--GGGSCTTT-
T ss_pred HHHHHhhcchHHHHHHHHHHHHhcCCCEEEecCcchhHHHHHHHcCCCEEEEecCCCcchhhhhhhhhh--cccccccc-
Confidence 11111 1 445667777888999999998878999999999999999965443221111000000 00001000
Q ss_pred CCCCCccccccccccccCCCCCCchHHHHHHHHh---------hccccEEEEcChhHhhHHHHHHHHhhcC-CCeeeecc
Q 038300 134 EFPSSSIFIHDYYMKSYFSNMVESPTTKRLLQCF---------ERSCNIVLIKSFRELEGKYIDYLSDLIK-KKVVPVGP 203 (401)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~a~~~Lvns~~eLe~~~~~~~~~~~~-~~v~~vGP 203 (401)
. .. .+ ...+.++.+.+ .. .+.++..+.+.++++ ..++ .+++++++
T Consensus 197 -~--~~--~~-------------~~~l~~~~~~~g~~~~~~~~~~-~~~~l~~~~~~~~~~------~~~~~~~~~~~~~ 251 (441)
T 2yjn_A 197 -R--ED--PL-------------AEWLTWTLEKYGGPAFDEEVVV-GQWTIDPAPAAIRLD------TGLKTVGMRYVDY 251 (441)
T ss_dssp -C--CC--HH-------------HHHHHHHHHHTTCCCCCGGGTS-CSSEEECSCGGGSCC------CCCCEEECCCCCC
T ss_pred -c--cc--hH-------------HHHHHHHHHHcCCCCCCccccC-CCeEEEecCccccCC------CCCCCCceeeeCC
Confidence 0 00 00 01111111111 11 344566655545431 1121 12333321
Q ss_pred cCCCCCCCCcccchHhhhhh-----------HhCCC------HHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCch
Q 038300 204 LVQDPVEQTDHEKGATEIIH-----------EYFLS------KEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPE 266 (401)
Q Consensus 204 l~~~~~~~~~~~~~~~~~l~-----------~~~~~------~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~ 266 (401)
.. ..+ +..|++ .+++. .+.+..++++|...++++||+.+..... ....++
T Consensus 252 ~~------~~~---~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~---~l~~~~- 318 (441)
T 2yjn_A 252 NG------PSV---VPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLE---GVANIP- 318 (441)
T ss_dssp CS------SCC---CCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTTS---SCSSCC-
T ss_pred CC------Ccc---cchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchh---hhccCC-
Confidence 10 011 334553 12222 1345677888888899999998743111 011233
Q ss_pred hHHHhhcCCceEEcccCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCC
Q 038300 267 SFLERTKERAMVIEGWAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKC 346 (401)
Q Consensus 267 ~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~ 346 (401)
.|+.+.+|+||.++|+++++ ||||||+||++|++++|||+|++|+..||..||+++++.|+|+.+ ..
T Consensus 319 --------~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~---~~ 385 (441)
T 2yjn_A 319 --------DNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIAL---PV 385 (441)
T ss_dssp --------SSEEECCSCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEEC---CT
T ss_pred --------CCEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEc---cc
Confidence 38999999999999988888 999999999999999999999999999999999999999999999 55
Q ss_pred CCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc-HHHHHHHHHHHH
Q 038300 347 GRIQREEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG-EEEIEWVADELI 397 (401)
Q Consensus 347 ~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~~ 397 (401)
.+++.++|.++|+++|+ +++++++++++++.+.+.+ ...+.+.++++.
T Consensus 386 ~~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 434 (441)
T 2yjn_A 386 PELTPDQLRESVKRVLD---DPAHRAGAARMRDDMLAEPSPAEVVGICEELA 434 (441)
T ss_dssp TTCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 67899999999999998 7999999999999998865 666666666653
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.96 E-value=3.9e-28 Score=232.47 Aligned_cols=317 Identities=14% Similarity=0.138 Sum_probs=196.6
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCC--CCCCC--CCCCCCCCCCc-------hHHHHHHHhhchHH
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLP--ELPPQ--YHTTKGLPPHL-------MPTLKEAFDMASPS 69 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~--~l~~~--~~~~~~~~~~~-------~~~~~~~~~~~~~~ 69 (401)
+|||+|++++++.+.+.++.. |+.+++++ +..+ .+... .......+... ...+......+...
T Consensus 41 ~~GheV~v~~~~~~~~~~~~~-----G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (398)
T 4fzr_A 41 AAGHEVLVAASENMGPTVTGA-----GLPFAPTC-PSLDMPEVLSWDREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDE 114 (398)
T ss_dssp HTTCEEEEEEEGGGHHHHHHT-----TCCEEEEE-SSCCHHHHHSBCTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCEEEEEcCHHHHHHHHhC-----CCeeEecC-CccchHhhhhhhccCcccccccchhhHHHHHHHHHHHHHHHHHHH
Confidence 379999999999988888888 99999986 2110 00000 00000111111 11223333445667
Q ss_pred HHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCCCCCCCCCCCCCccccccccccc
Q 038300 70 FFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDEEFPSSSIFIHDYYMKS 149 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 149 (401)
+.+++++.+||+||+|....++..+|+.+|||+|.+..............
T Consensus 115 l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~~~------------------------------ 164 (398)
T 4fzr_A 115 ALALAERWKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIKSAG------------------------------ 164 (398)
T ss_dssp HHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHHHHH------------------------------
T ss_pred HHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhhHHH------------------------------
Confidence 88889999999999998888899999999999998765431111000000
Q ss_pred cCCCCCCchHHHHHHHH-----hhccccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCCCCCCcccchHhhhhh-
Q 038300 150 YFSNMVESPTTKRLLQC-----FERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDPVEQTDHEKGATEIIH- 223 (401)
Q Consensus 150 ~~~~~~~~~~~~~~~~~-----~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~l~- 223 (401)
...+.+.... ... .+..+..+.+.+.. .......++.++++.... .. +..|+.
T Consensus 165 -------~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~ 223 (398)
T 4fzr_A 165 -------VGELAPELAELGLTDFPD-PLLSIDVCPPSMEA-----QPKPGTTKMRYVPYNGRN-----DQ---VPSWVFE 223 (398)
T ss_dssp -------HHHTHHHHHTTTCSSCCC-CSEEEECSCGGGC---------CCCEECCCCCCCCSS-----CC---CCHHHHS
T ss_pred -------HHHHHHHHHHcCCCCCCC-CCeEEEeCChhhCC-----CCCCCCCCeeeeCCCCCC-----CC---Cchhhhc
Confidence 0000000000 011 24444444444432 111111122233321000 00 122322
Q ss_pred ----------HhCC-----------CHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEccc
Q 038300 224 ----------EYFL-----------SKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGW 282 (401)
Q Consensus 224 ----------~~~~-----------~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (401)
.+.+ ..+.+..+++++...+.+++|+.+..... ....+ +.|+.+.+|
T Consensus 224 ~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~---~l~~~---------~~~v~~~~~ 291 (398)
T 4fzr_A 224 ERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLAQ---TLQPL---------PEGVLAAGQ 291 (398)
T ss_dssp CCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC-----------C---------CTTEEEESC
T ss_pred CCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcchh---hhccC---------CCcEEEeCc
Confidence 1222 22347788889888899999987643100 00122 348999999
Q ss_pred CchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHh
Q 038300 283 APQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVV 362 (401)
Q Consensus 283 ~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l 362 (401)
+|+.++|+++++ ||||||.||++||+++|+|+|++|...||..||.++++.|+|+.+ ..+++++++|.++|+++|
T Consensus 292 ~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~---~~~~~~~~~l~~ai~~ll 366 (398)
T 4fzr_A 292 FPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEV---PWEQAGVESVLAACARIR 366 (398)
T ss_dssp CCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEEC---C-------CHHHHHHHHH
T ss_pred CCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEec---CcccCCHHHHHHHHHHHH
Confidence 999999999999 999999999999999999999999999999999999999999999 556778999999999999
Q ss_pred cCcccHHHHHHHHHHHHHHHhhc-HHHHHHHHH
Q 038300 363 MEREGEKIKRKTREMGEKIKEKG-EEEIEWVAD 394 (401)
Q Consensus 363 ~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~ 394 (401)
+ ++++++++++.++.+.+.. .+.+.+.++
T Consensus 367 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 396 (398)
T 4fzr_A 367 D---DSSYVGNARRLAAEMATLPTPADIVRLIE 396 (398)
T ss_dssp H---CTHHHHHHHHHHHHHTTSCCHHHHHHHHT
T ss_pred h---CHHHHHHHHHHHHHHHcCCCHHHHHHHHh
Confidence 8 7899999999999888765 555555443
No 17
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.95 E-value=1.9e-26 Score=220.18 Aligned_cols=319 Identities=13% Similarity=0.103 Sum_probs=202.3
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCC-------CCCC-CCCC-CCchHHHHHHHhhc-----
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQ-------YHTT-KGLP-PHLMPTLKEAFDMA----- 66 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~-------~~~~-~~~~-~~~~~~~~~~~~~~----- 66 (401)
++||+|++++++.+.+.+... |+++++++-+..+ +... .... .... ......+......+
T Consensus 27 ~~GheV~v~~~~~~~~~~~~~-----g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (391)
T 3tsa_A 27 ASGHEVLIAAPPELQATAHGA-----GLTTAGIRGNDRT-GDTGGTTQLRFPNPAFGQRDTEAGRQLWEQTASNVAQSSL 100 (391)
T ss_dssp HTTCEEEEEECHHHHHHHHHB-----TCEEEEC---------------CCSCCGGGGCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCEEEEecChhhHHHHHhC-----CCceeeecCCccc-hhhhhhhcccccccccccccchhHHHHHHHHHHHHhhcch
Confidence 379999999998888888888 9999988212111 0000 0000 0000 11122233333344
Q ss_pred --hHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCCCCCCCCCCCCCcccccc
Q 038300 67 --SPSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDEEFPSSSIFIHD 144 (401)
Q Consensus 67 --~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 144 (401)
...+.+++++.+||+||+|....++..+|+.+|||+|.+.......... ..
T Consensus 101 ~~~~~l~~~l~~~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~---------------------------~~ 153 (391)
T 3tsa_A 101 DQLPEYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTAGP---------------------------FS 153 (391)
T ss_dssp HHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTTTH---------------------------HH
T ss_pred hhHHHHHHHHHhcCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcccccc---------------------------cc
Confidence 6778889999999999999887888899999999999876432100000 00
Q ss_pred ccccccCCCCCCchHHHHHHHHhhc----cccEEEEcChhHhhHHHHHHHHhhcCCCeeeecccCCCCCCCCcccchHhh
Q 038300 145 YYMKSYFSNMVESPTTKRLLQCFER----SCNIVLIKSFRELEGKYIDYLSDLIKKKVVPVGPLVQDPVEQTDHEKGATE 220 (401)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~----~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~ 220 (401)
... ...+.+....+.. ..+..+..+.++++. .......++.++ |..... . ...
T Consensus 154 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-p~~~~~-----~---~~~ 210 (391)
T 3tsa_A 154 DRA---------HELLDPVCRHHGLTGLPTPELILDPCPPSLQA-----SDAPQGAPVQYV-PYNGSG-----A---FPA 210 (391)
T ss_dssp HHH---------HHHHHHHHHHTTSSSSCCCSEEEECSCGGGSC-----TTSCCCEECCCC-CCCCCE-----E---CCG
T ss_pred chH---------HHHHHHHHHHcCCCCCCCCceEEEecChhhcC-----CCCCccCCeeee-cCCCCc-----C---CCc
Confidence 000 0111111111111 025555555444442 111111122333 111100 0 111
Q ss_pred hhh--------------H---hCCCHHHHHHHHHHHHhC-CCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEccc
Q 038300 221 IIH--------------E---YFLSKEEMEDIALGLELS-GVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGW 282 (401)
Q Consensus 221 ~l~--------------~---~~~~~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (401)
|+. . .....+.+..++++ .+. +++++|+.+.... .....+ ..|+.+.+|
T Consensus 211 ~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~---~~l~~~---------~~~v~~~~~ 277 (391)
T 3tsa_A 211 WGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHR---ALLTDL---------PDNARIAES 277 (391)
T ss_dssp GGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGG---GGCTTC---------CTTEEECCS
T ss_pred hhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcch---hhcccC---------CCCEEEecc
Confidence 221 1 11224556777777 766 7889988764210 000112 348999999
Q ss_pred CchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCC--CCCCHHHHHHHHHH
Q 038300 283 APQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKC--GRIQREEMARVIKE 360 (401)
Q Consensus 283 ~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~--~~~~~~~l~~~i~~ 360 (401)
+|+.++|+++++ ||||||.||++||+++|+|+|++|...||..|+.++++.|+|+.+ .. .+.+.+.|.++|++
T Consensus 278 ~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~---~~~~~~~~~~~l~~ai~~ 352 (391)
T 3tsa_A 278 VPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICL---PDEQAQSDHEQFTDSIAT 352 (391)
T ss_dssp CCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEEC---CSHHHHTCHHHHHHHHHH
T ss_pred CCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEec---CcccccCCHHHHHHHHHH
Confidence 999999988888 999999999999999999999999999999999999999999999 44 45789999999999
Q ss_pred HhcCcccHHHHHHHHHHHHHHHhhc-HHHHHHHHHHH
Q 038300 361 VVMEREGEKIKRKTREMGEKIKEKG-EEEIEWVADEL 396 (401)
Q Consensus 361 ~l~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~ 396 (401)
+|+ +++++++++++++.+.+.+ ...+.+.++.+
T Consensus 353 ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 386 (391)
T 3tsa_A 353 VLG---DTGFAAAAIKLSDEITAMPHPAALVRTLENT 386 (391)
T ss_dssp HHT---CTHHHHHHHHHHHHHHTSCCHHHHHHHHHHC
T ss_pred HHc---CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 998 7899999999999998866 66666666554
No 18
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.95 E-value=2.1e-26 Score=220.45 Aligned_cols=319 Identities=15% Similarity=0.114 Sum_probs=202.1
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCC--------CC------C-CCCCCCCCchHHHHHHHhh
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPP--------QY------H-TTKGLPPHLMPTLKEAFDM 65 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~--------~~------~-~~~~~~~~~~~~~~~~~~~ 65 (401)
++||+|+++++ .+.+.++.. |+.+++++.. .+ +.. .. . ........+...+......
T Consensus 46 ~~GheV~v~~~-~~~~~~~~~-----G~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (398)
T 3oti_A 46 TAGHDVLIAVA-EHADRAAAA-----GLEVVDVAPD-YS-AVKVFEQVAKDNPRFAETVATRPAIDLEEWGVQIAAVNRP 117 (398)
T ss_dssp HTTCEEEEEES-SCHHHHHTT-----TCEEEESSTT-CC-HHHHHHHHHHHCHHHHHTGGGSCCCSGGGGHHHHHHHHGG
T ss_pred HCCCEEEEecc-chHHHHHhC-----CCeeEecCCc-cC-HHHHhhhcccCCccccccccCChhhhHHHHHHHHHHHHHH
Confidence 37999999999 888888888 9999988611 00 000 00 0 0001112233445555666
Q ss_pred chHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCCCCCCCCCCCCCccccccc
Q 038300 66 ASPSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDEEFPSSSIFIHDY 145 (401)
Q Consensus 66 ~~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 145 (401)
+...+.+++++.+||+||+|....++..+|+.+|||+|.+........... .
T Consensus 118 ~~~~l~~~l~~~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~----------------------------~ 169 (398)
T 3oti_A 118 LVDGTMALVDDYRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRTRGMH----------------------------R 169 (398)
T ss_dssp GHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCCTTHH----------------------------H
T ss_pred HHHHHHHHHHHcCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCccchh----------------------------h
Confidence 788999999999999999998888899999999999998764321000000 0
Q ss_pred cccccCCCCCCchHHHHHHHHh----hccccEEEEcChhHhhHHHHHHHHhhcCCCeeee---cccCCCC-CCCCcccch
Q 038300 146 YMKSYFSNMVESPTTKRLLQCF----ERSCNIVLIKSFRELEGKYIDYLSDLIKKKVVPV---GPLVQDP-VEQTDHEKG 217 (401)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~----~~~a~~~Lvns~~eLe~~~~~~~~~~~~~~v~~v---GPl~~~~-~~~~~~~~~ 217 (401)
... ..+....+.+ .. .+..+..+.+.+.. .......++.++ |+-.... ....++...
T Consensus 170 ~~~---------~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (398)
T 3oti_A 170 SIA---------SFLTDLMDKHQVSLPE-PVATIESFPPSLLL-----EAEPEGWFMRWVPYGGGAVLGDRLPPVPARPE 234 (398)
T ss_dssp HHH---------TTCHHHHHHTTCCCCC-CSEEECSSCGGGGT-----TSCCCSBCCCCCCCCCCEECCSSCCCCCSSCE
T ss_pred HHH---------HHHHHHHHHcCCCCCC-CCeEEEeCCHHHCC-----CCCCCCCCccccCCCCCcCCchhhhcCCCCCE
Confidence 000 0000011111 11 24444444333332 100000111121 1110000 000000000
Q ss_pred HhhhhhHhCC-----CHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhhhcccC
Q 038300 218 ATEIIHEYFL-----SKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMKILGHP 292 (401)
Q Consensus 218 ~~~~l~~~~~-----~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~ 292 (401)
+ .+..+.+ ..+.+.+++++|...+++++|+.+.... .....++ .|+.+.+|+|+.++|+++
T Consensus 235 v--~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~---~~l~~~~---------~~v~~~~~~~~~~ll~~a 300 (398)
T 3oti_A 235 V--AITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDI---SPLGTLP---------RNVRAVGWTPLHTLLRTC 300 (398)
T ss_dssp E--EECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCC---GGGCSCC---------TTEEEESSCCHHHHHTTC
T ss_pred E--EEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcCh---hhhccCC---------CcEEEEccCCHHHHHhhC
Confidence 0 0111222 3345778889998889999999875311 0111233 389999999999999999
Q ss_pred CcceEEecCCchhHHHHHHhCCcEEecCCccchhhHH--HHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcccHHH
Q 038300 293 SIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNA--RLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMEREGEKI 370 (401)
Q Consensus 293 ~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na--~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 370 (401)
++ ||||||+||++||+++|+|+|++|...||..|| .++++.|+|+.+ ...+.+++.|. ++++ ++++
T Consensus 301 d~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~---~~~~~~~~~l~----~ll~---~~~~ 368 (398)
T 3oti_A 301 TA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVS---TSDKVDADLLR----RLIG---DESL 368 (398)
T ss_dssp SE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEEC---CGGGCCHHHHH----HHHH---CHHH
T ss_pred CE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEee---CCCCCCHHHHH----HHHc---CHHH
Confidence 98 999999999999999999999999999999999 999999999999 55566777776 7787 7999
Q ss_pred HHHHHHHHHHHHhhc-HHHHHHHHHHH
Q 038300 371 KRKTREMGEKIKEKG-EEEIEWVADEL 396 (401)
Q Consensus 371 ~~~a~~~~~~~~~~~-~~~~~~~v~~~ 396 (401)
+++++++++.+.+.. ...+.+.++.+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~l~~l 395 (398)
T 3oti_A 369 RTAAREVREEMVALPTPAETVRRIVER 395 (398)
T ss_dssp HHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 999999999998866 66666666655
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.93 E-value=8.4e-24 Score=203.13 Aligned_cols=318 Identities=16% Similarity=0.173 Sum_probs=207.0
Q ss_pred CCCeEEEEEeCCccchhhhccccCCCCeEEEEecCC-------------CCCCCCCCCCCCCCCCCCchHHHHHH-Hhhc
Q 038300 1 GSNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLP-------------SLPELPPQYHTTKGLPPHLMPTLKEA-FDMA 66 (401)
Q Consensus 1 ~rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~-------------~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~ 66 (401)
++||+|++++++...+.+... |++++.++.. ...+.+. . ............+... ...+
T Consensus 46 ~~GheV~v~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~ 118 (412)
T 3otg_A 46 AAGHEVTFATGEGFAGTLRKL-----GFEPVATGMPVFDGFLAALRIRFDTDSPEG-L-TPEQLSELPQIVFGRVIPQRV 118 (412)
T ss_dssp HTTCEEEEEECGGGHHHHHHT-----TCEEEECCCCHHHHHHHHHHHHHSCSCCTT-C-CHHHHTTSHHHHHHTHHHHHH
T ss_pred HCCCEEEEEccHHHHHHHHhc-----CCceeecCcccccchhhhhhhhhcccCCcc-C-ChhHhhHHHHHHHhccchHHH
Confidence 379999999998887777777 9999988620 0000010 0 0000001122222222 3334
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEeccchHHHHHhhhhcccCCCCCCCCCCCCCCCCcccccccc
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFLVSSAATSAFMFHAIKKNSLGDANDDDEEFPSSSIFIHDYY 146 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 146 (401)
...+.+++++.+||+||+|....++..+|+++|||+|.+..............
T Consensus 119 ~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~~~~~--------------------------- 171 (412)
T 3otg_A 119 FDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPDDLTRSI--------------------------- 171 (412)
T ss_dssp HHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCSHHHHHH---------------------------
T ss_pred HHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEecccccCchhhhHHH---------------------------
Confidence 57788899999999999998777788899999999998755421100000000
Q ss_pred ccccCCCCCCchHHHHHHHH----------hhccccEEEEcChhHhhHHHHHHHHhhcCC---CeeeecccCCCCCCCCc
Q 038300 147 MKSYFSNMVESPTTKRLLQC----------FERSCNIVLIKSFRELEGKYIDYLSDLIKK---KVVPVGPLVQDPVEQTD 213 (401)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~----------~~~~a~~~Lvns~~eLe~~~~~~~~~~~~~---~v~~vGPl~~~~~~~~~ 213 (401)
...+.++... ... ++.++..+-.+++. ....+.. ++.++++-...
T Consensus 172 ----------~~~~~~~~~~~g~~~~~~~~~~~-~d~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~------ 229 (412)
T 3otg_A 172 ----------EEEVRGLAQRLGLDLPPGRIDGF-GNPFIDIFPPSLQE-----PEFRARPRRHELRPVPFAEQG------ 229 (412)
T ss_dssp ----------HHHHHHHHHHTTCCCCSSCCGGG-GCCEEECSCGGGSC-----HHHHTCTTEEECCCCCCCCCC------
T ss_pred ----------HHHHHHHHHHcCCCCCcccccCC-CCeEEeeCCHHhcC-----CcccCCCCcceeeccCCCCCC------
Confidence 0001111111 122 55666666555543 2211111 12222221100
Q ss_pred ccchHhhh--h-h---------Hh---CCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceE
Q 038300 214 HEKGATEI--I-H---------EY---FLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMV 278 (401)
Q Consensus 214 ~~~~~~~~--l-~---------~~---~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (401)
. ...| . + .+ .-..+.+.++++++.+.+.+++|+.+..... .....++ .++.
T Consensus 230 ~---~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~--~~l~~~~---------~~v~ 295 (412)
T 3otg_A 230 D---LPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLDV--SGLGEVP---------ANVR 295 (412)
T ss_dssp C---CCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCCC--TTCCCCC---------TTEE
T ss_pred C---CCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCCh--hhhccCC---------CcEE
Confidence 0 1123 1 0 12 2345678888899988899999998754211 0111233 3888
Q ss_pred EcccCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHH
Q 038300 279 IEGWAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVI 358 (401)
Q Consensus 279 ~~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i 358 (401)
+.+|+|+.++|+++++ ||+|||+||++||+++|+|+|++|..+||..|+..+++.|+|+.+ ..++.++++|.++|
T Consensus 296 ~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~---~~~~~~~~~l~~ai 370 (412)
T 3otg_A 296 LESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHL---LPDNISPDSVSGAA 370 (412)
T ss_dssp EESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC---CGGGCCHHHHHHHH
T ss_pred EeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEec---CcccCCHHHHHHHH
Confidence 9999999999999999 999999999999999999999999999999999999999999999 55667999999999
Q ss_pred HHHhcCcccHHHHHHHHHHHHHHHhhc-HHHHHHHHHHH
Q 038300 359 KEVVMEREGEKIKRKTREMGEKIKEKG-EEEIEWVADEL 396 (401)
Q Consensus 359 ~~~l~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~ 396 (401)
+++++ ++++++++.+.++.+.+.. .+.+.+.++++
T Consensus 371 ~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 406 (412)
T 3otg_A 371 KRLLA---EESYRAGARAVAAEIAAMPGPDEVVRLLPGF 406 (412)
T ss_dssp HHHHH---CHHHHHHHHHHHHHHHHSCCHHHHHTTHHHH
T ss_pred HHHHh---CHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 99998 7899999999998888755 55555555544
No 20
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.90 E-value=7.2e-23 Score=172.08 Aligned_cols=135 Identities=21% Similarity=0.418 Sum_probs=113.2
Q ss_pred CHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEcccCchhhhcccCCcceEEecCCchhHH
Q 038300 228 SKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQMKILGHPSIGGFVSHCGWSSVM 307 (401)
Q Consensus 228 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~i~hgG~~s~~ 307 (401)
..+.+..++++|...+++++|+.+... ...+++ |+.+.+|+|+.+++.|+.+++||||||+||++
T Consensus 36 ~~~~~~~~~~al~~~~~~~~~~~g~~~------~~~~~~---------~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~ 100 (170)
T 2o6l_A 36 TEERANVIASALAQIPQKVLWRFDGNK------PDTLGL---------NTRLYKWIPQNDLLGHPKTRAFITHGGANGIY 100 (170)
T ss_dssp CHHHHHHHHHHHTTSSSEEEEECCSSC------CTTCCT---------TEEEESSCCHHHHHTSTTEEEEEECCCHHHHH
T ss_pred CHHHHHHHHHHHHhCCCeEEEEECCcC------cccCCC---------cEEEecCCCHHHHhcCCCcCEEEEcCCccHHH
Confidence 456778889999888899999986431 112333 78899999999999776666799999999999
Q ss_pred HHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHh
Q 038300 308 ESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMEREGEKIKRKTREMGEKIKE 383 (401)
Q Consensus 308 eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~ 383 (401)
|++++|+|+|++|...||..||+++++.|+|+.+ +..+++.++|.++|+++++ +++|+++++++++.+++
T Consensus 101 Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~---~~~~~~~~~l~~~i~~ll~---~~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 101 EAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRV---DFNTMSSTDLLNALKRVIN---DPSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEEC---CTTTCCHHHHHHHHHHHHH---CHHHHHHHHHHC-----
T ss_pred HHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEe---ccccCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999 5567899999999999998 78999999999988763
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.89 E-value=2.1e-21 Score=183.22 Aligned_cols=116 Identities=19% Similarity=0.264 Sum_probs=94.7
Q ss_pred CCceEEcccCchh-hhcccCCcceEEecCCchhHHHHHHhCCcEEecCCc----cchhhHHHHHHhhCeeeeeeccCCCC
Q 038300 274 ERAMVIEGWAPQM-KILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMH----VDQPLNARLVEDVGIGLEVRRNKCGR 348 (401)
Q Consensus 274 ~~~~~~~~~~p~~-~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~----~dQ~~na~~~~~~g~g~~l~~~~~~~ 348 (401)
+.++.+.+|++++ ++|+.+|+ +|||+|.+|++|++++|+|+|++|+. +||..||+.+++.|+|+.+ ...+
T Consensus 234 ~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l---~~~~ 308 (365)
T 3s2u_A 234 AVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLL---PQKS 308 (365)
T ss_dssp TCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEEC---CTTT
T ss_pred ccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEe---ecCC
Confidence 4467788999987 89999999 99999999999999999999999973 6899999999999999999 6778
Q ss_pred CCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc-HHHHHHHHHHHHhhh
Q 038300 349 IQREEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG-EEEIEWVADELIHLF 400 (401)
Q Consensus 349 ~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~~~~~ 400 (401)
++++.|.++|.++++ |+ ++.++|++.+++.+ .++++++++.+.+++
T Consensus 309 ~~~~~L~~~i~~ll~---d~---~~~~~m~~~a~~~~~~~aa~~ia~~i~~la 355 (365)
T 3s2u_A 309 TGAAELAAQLSEVLM---HP---ETLRSMADQARSLAKPEATRTVVDACLEVA 355 (365)
T ss_dssp CCHHHHHHHHHHHHH---CT---HHHHHHHHHHHHTCCTTHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHC---CH---HHHHHHHHHHHhcCCccHHHHHHHHHHHHH
Confidence 999999999999998 44 34456666666655 455556666555544
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.56 E-value=1.1e-12 Score=123.32 Aligned_cols=82 Identities=16% Similarity=0.223 Sum_probs=73.4
Q ss_pred CceEEcccCch-hhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCc---cchhhHHHHHHhhCeeeeeeccCCCCCC
Q 038300 275 RAMVIEGWAPQ-MKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMH---VDQPLNARLVEDVGIGLEVRRNKCGRIQ 350 (401)
Q Consensus 275 ~~~~~~~~~p~-~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~---~dQ~~na~~~~~~g~g~~l~~~~~~~~~ 350 (401)
.++.+.+|+++ .++++.+++ ||+++|.+++.||+++|+|+|+.|.. .||..|++.+++.|.|+.+ +.++.+
T Consensus 237 ~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~---~~~d~~ 311 (364)
T 1f0k_A 237 PQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKII---EQPQLS 311 (364)
T ss_dssp TTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEEC---CGGGCC
T ss_pred CceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCCcEEEe---ccccCC
Confidence 36888899965 499999999 99999999999999999999999987 7999999999999999988 445567
Q ss_pred HHHHHHHHHHH
Q 038300 351 REEMARVIKEV 361 (401)
Q Consensus 351 ~~~l~~~i~~~ 361 (401)
.+++.++|.++
T Consensus 312 ~~~la~~i~~l 322 (364)
T 1f0k_A 312 VDAVANTLAGW 322 (364)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHhc
Confidence 99999999988
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.48 E-value=7.6e-14 Score=120.47 Aligned_cols=76 Identities=20% Similarity=0.266 Sum_probs=66.5
Q ss_pred ceEEcccCchh-hhcc-cCCcceEEecCCchhHHHHHHhCCcEEecCCc----cchhhHHHHHHhhCeeeeeeccCCCCC
Q 038300 276 AMVIEGWAPQM-KILG-HPSIGGFVSHCGWSSVMESMRLGVPIIAMPMH----VDQPLNARLVEDVGIGLEVRRNKCGRI 349 (401)
Q Consensus 276 ~~~~~~~~p~~-~~l~-~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~----~dQ~~na~~~~~~g~g~~l~~~~~~~~ 349 (401)
++.+.+|++++ ++|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||+++++.|+|+.+
T Consensus 115 ~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~-------- 184 (224)
T 2jzc_A 115 KVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC-------- 184 (224)
T ss_dssp EEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE--------
T ss_pred eEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc--------
Confidence 56677898887 8999 9999 99999999999999999999999984 5799999999999999765
Q ss_pred CHHHHHHHHHHH
Q 038300 350 QREEMARVIKEV 361 (401)
Q Consensus 350 ~~~~l~~~i~~~ 361 (401)
+.+.|.++|+++
T Consensus 185 ~~~~L~~~i~~l 196 (224)
T 2jzc_A 185 APTETGLIAGLR 196 (224)
T ss_dssp CSCTTTHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 456677777776
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=98.90 E-value=3.4e-09 Score=95.12 Aligned_cols=96 Identities=14% Similarity=0.049 Sum_probs=74.2
Q ss_pred HHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhh-cCCceEEcccCchh-hhcccCCcceEEecCCchhHHHHHH
Q 038300 234 DIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERT-KERAMVIEGWAPQM-KILGHPSIGGFVSHCGWSSVMESMR 311 (401)
Q Consensus 234 ~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~-~~l~~~~~~~~i~hgG~~s~~eal~ 311 (401)
.++++|.... ++.++.+... ...+.+.+.. ...|+.+..|++++ ++++.+++ +||+|| +|++|+++
T Consensus 175 ~vl~~L~~~~-~i~vv~G~~~--------~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDl--vI~~gG-~T~~E~~~ 242 (282)
T 3hbm_A 175 QIASELPKTK-IISIATSSSN--------PNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNK--LIISAS-SLVNEALL 242 (282)
T ss_dssp HHHHHSCTTS-CEEEEECTTC--------TTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEE--EEEESS-HHHHHHHH
T ss_pred HHHHHhhcCC-CEEEEECCCc--------hHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCE--EEECCc-HHHHHHHH
Confidence 4555554433 4556665421 1223333322 23589999999988 89999999 999999 89999999
Q ss_pred hCCcEEecCCccchhhHHHHHHhhCeeeee
Q 038300 312 LGVPIIAMPMHVDQPLNARLVEDVGIGLEV 341 (401)
Q Consensus 312 ~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l 341 (401)
.|+|+|++|...+|..||+.+++.|+|+.+
T Consensus 243 ~g~P~i~ip~~~~Q~~nA~~l~~~G~~~~~ 272 (282)
T 3hbm_A 243 LKANFKAICYVKNQESTATWLAKKGYEVEY 272 (282)
T ss_dssp TTCCEEEECCSGGGHHHHHHHHHTTCEEEC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHCCCEEEc
Confidence 999999999999999999999999999988
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.88 E-value=1.6e-06 Score=81.68 Aligned_cols=111 Identities=16% Similarity=0.089 Sum_probs=73.7
Q ss_pred CceEEcccCchh---hhcccCCcceEEe-----------cCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeee
Q 038300 275 RAMVIEGWAPQM---KILGHPSIGGFVS-----------HCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLE 340 (401)
Q Consensus 275 ~~~~~~~~~p~~---~~l~~~~~~~~i~-----------hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~ 340 (401)
.++.+.+|+|+. ++++.+++ +|. -|.-+++.||+++|+|+|+.+..+-.. .+ ..|.|+.
T Consensus 253 ~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e----~i-~~~~g~~ 325 (394)
T 3okp_A 253 QNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPE----TV-TPATGLV 325 (394)
T ss_dssp GGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGG----GC-CTTTEEE
T ss_pred CeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHH----HH-hcCCceE
Confidence 578889999754 78889999 775 444578999999999999987643222 22 2347777
Q ss_pred eeccCCCCCCHHHHHHHHHHHhcCcccHHHHH-HHHHHHHHHHh-hc-HHHHHHHHHHHHhhh
Q 038300 341 VRRNKCGRIQREEMARVIKEVVMEREGEKIKR-KTREMGEKIKE-KG-EEEIEWVADELIHLF 400 (401)
Q Consensus 341 l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~-~a~~~~~~~~~-~~-~~~~~~~v~~~~~~~ 400 (401)
+ ..-+.+++.++|.++++ ++..++ ..++..+.+++ .. ...+.++.+.+.++.
T Consensus 326 ~-----~~~d~~~l~~~i~~l~~---~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 326 V-----EGSDVDKLSELLIELLD---DPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEP 380 (394)
T ss_dssp C-----CTTCHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCC
T ss_pred e-----CCCCHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 7 23478999999999998 444333 33333333444 34 555566666555443
No 26
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.79 E-value=1.2e-07 Score=89.99 Aligned_cols=106 Identities=11% Similarity=0.153 Sum_probs=73.6
Q ss_pred CceEEcccCch---hhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCH
Q 038300 275 RAMVIEGWAPQ---MKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQR 351 (401)
Q Consensus 275 ~~~~~~~~~p~---~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~ 351 (401)
.++.+.+++++ ..+++.+++ +|+.+|. .+.||+++|+|+|+.|-.++++. +++.|.|+.+ . .++
T Consensus 282 ~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e----~v~~g~~~lv---~---~d~ 348 (403)
T 3ot5_A 282 ERIHLIEPLDAIDFHNFLRKSYL--VFTDSGG-VQEEAPGMGVPVLVLRDTTERPE----GIEAGTLKLI---G---TNK 348 (403)
T ss_dssp TTEEEECCCCHHHHHHHHHHEEE--EEECCHH-HHHHGGGTTCCEEECCSSCSCHH----HHHHTSEEEC---C---SCH
T ss_pred CCEEEeCCCCHHHHHHHHHhcCE--EEECCcc-HHHHHHHhCCCEEEecCCCcchh----heeCCcEEEc---C---CCH
Confidence 57888888863 388889998 9998853 33699999999999976666554 3567888877 2 279
Q ss_pred HHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc-HHHHHHHHHHHHhh
Q 038300 352 EEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG-EEEIEWVADELIHL 399 (401)
Q Consensus 352 ~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~~~~ 399 (401)
++|.++|.++++ ++..+++ +++..+..+ ..+++++++.+.++
T Consensus 349 ~~l~~ai~~ll~---~~~~~~~---m~~~~~~~g~~~aa~rI~~~l~~~ 391 (403)
T 3ot5_A 349 ENLIKEALDLLD---NKESHDK---MAQAANPYGDGFAANRILAAIKSH 391 (403)
T ss_dssp HHHHHHHHHHHH---CHHHHHH---HHHSCCTTCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc---CHHHHHH---HHhhcCcccCCcHHHHHHHHHHHH
Confidence 999999999998 5554443 333333333 34445555555443
No 27
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.76 E-value=1.7e-07 Score=88.97 Aligned_cols=104 Identities=15% Similarity=0.239 Sum_probs=72.8
Q ss_pred CCceEEcccCc---hhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCC
Q 038300 274 ERAMVIEGWAP---QMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQ 350 (401)
Q Consensus 274 ~~~~~~~~~~p---~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~ 350 (401)
..++.+.++++ ...+++.+++ +|+.+| |.+.||+++|+|+|+..-.++++ .+++.|.++.+ . .+
T Consensus 287 ~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~G~~~lv---~---~d 353 (396)
T 3dzc_A 287 VSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAAGTVKLV---G---TN 353 (396)
T ss_dssp CTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHHTSEEEC---T---TC
T ss_pred CCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHcCceEEc---C---CC
Confidence 35788877764 3488999999 999998 66679999999999986555543 24567888766 2 26
Q ss_pred HHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc-HHHHHHHHHHH
Q 038300 351 REEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG-EEEIEWVADEL 396 (401)
Q Consensus 351 ~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~ 396 (401)
+++|.++|.++++ ++..++ ++++.....+ ..+++++++.+
T Consensus 354 ~~~l~~ai~~ll~---d~~~~~---~m~~~~~~~~~~~aa~ri~~~l 394 (396)
T 3dzc_A 354 QQQICDALSLLLT---DPQAYQ---AMSQAHNPYGDGKACQRIADIL 394 (396)
T ss_dssp HHHHHHHHHHHHH---CHHHHH---HHHTSCCTTCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHc---CHHHHH---HHhhccCCCcCChHHHHHHHHH
Confidence 8999999999998 555444 3443333344 45555565554
No 28
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.68 E-value=1.6e-05 Score=74.95 Aligned_cols=110 Identities=14% Similarity=0.159 Sum_probs=69.6
Q ss_pred CceEEcccCchh-hhcccCCcceEE----ecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCC
Q 038300 275 RAMVIEGWAPQM-KILGHPSIGGFV----SHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRI 349 (401)
Q Consensus 275 ~~~~~~~~~p~~-~~l~~~~~~~~i----~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~ 349 (401)
.++.+.++..+. ++++.+++ +| .-|.-+++.||+++|+|+|+.+..+- ...+.+.+.|+.+ + .-
T Consensus 267 ~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~~----~e~v~~~~~g~~~---~--~~ 335 (394)
T 2jjm_A 267 DRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVGGI----PEVIQHGDTGYLC---E--VG 335 (394)
T ss_dssp GGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCTTS----TTTCCBTTTEEEE---C--TT
T ss_pred CeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCCCh----HHHhhcCCceEEe---C--CC
Confidence 356666665544 89999999 77 44556789999999999999876431 2223334578877 2 23
Q ss_pred CHHHHHHHHHHHhcCcccHHHHHH-HHHHHHHHHh-hc-HHHHHHHHHHHHh
Q 038300 350 QREEMARVIKEVVMEREGEKIKRK-TREMGEKIKE-KG-EEEIEWVADELIH 398 (401)
Q Consensus 350 ~~~~l~~~i~~~l~~~~~~~~~~~-a~~~~~~~~~-~~-~~~~~~~v~~~~~ 398 (401)
+.+++.++|.++++ ++..+++ .++..+.+.+ .. ...++++.+.+.+
T Consensus 336 d~~~la~~i~~l~~---~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 384 (394)
T 2jjm_A 336 DTTGVADQAIQLLK---DEELHRNMGERARESVYEQFRSEKIVSQYETIYYD 384 (394)
T ss_dssp CHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 78999999999998 4543332 3333333322 33 4444444444443
No 29
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.67 E-value=1.4e-06 Score=82.17 Aligned_cols=77 Identities=17% Similarity=0.186 Sum_probs=59.6
Q ss_pred CceEEcccCc---hhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCH
Q 038300 275 RAMVIEGWAP---QMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQR 351 (401)
Q Consensus 275 ~~~~~~~~~p---~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~ 351 (401)
.++.+.+.++ ...+++++++ +||-+|. .+.||.+.|+|+|.++...+.+. .++.|.++.+ + .++
T Consensus 263 ~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~G~~~lv-----~-~d~ 329 (385)
T 4hwg_A 263 DKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GMDAGTLIMS-----G-FKA 329 (385)
T ss_dssp GGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHHTCCEEC-----C-SSH
T ss_pred CCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhcCceEEc-----C-CCH
Confidence 4677765554 3488999999 9999885 47999999999999987654222 3567888766 2 378
Q ss_pred HHHHHHHHHHhcC
Q 038300 352 EEMARVIKEVVME 364 (401)
Q Consensus 352 ~~l~~~i~~~l~~ 364 (401)
++|.+++.+++++
T Consensus 330 ~~i~~ai~~ll~d 342 (385)
T 4hwg_A 330 ERVLQAVKTITEE 342 (385)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999974
No 30
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.52 E-value=8.6e-05 Score=70.87 Aligned_cols=79 Identities=18% Similarity=0.117 Sum_probs=60.4
Q ss_pred CCceEEcccCchh---hhcccCCcceEEecC----CchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCC
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVSHC----GWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKC 346 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~hg----G~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~ 346 (401)
..++.+.+|+|+. ++++.+++ +|.-. .-+++.||+++|+|+|+.+.. .....+.+.+.|+.+ .
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~e~i~~~~~g~~~---~- 374 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARVG----GLPIAVAEGETGLLV---D- 374 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESCT----THHHHSCBTTTEEEE---S-
T ss_pred CCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCCC----ChhHHhhCCCcEEEC---C-
Confidence 3578888999763 78889999 77543 245899999999999997653 344455555678888 2
Q ss_pred CCCCHHHHHHHHHHHhc
Q 038300 347 GRIQREEMARVIKEVVM 363 (401)
Q Consensus 347 ~~~~~~~l~~~i~~~l~ 363 (401)
.-+.+++.++|.++++
T Consensus 375 -~~d~~~la~~i~~l~~ 390 (438)
T 3c48_A 375 -GHSPHAWADALATLLD 390 (438)
T ss_dssp -SCCHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHc
Confidence 3478999999999998
No 31
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=98.39 E-value=0.00013 Score=69.50 Aligned_cols=110 Identities=16% Similarity=0.105 Sum_probs=70.9
Q ss_pred CceEEcccCchh---hhcccCCcceEEec----CCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCC
Q 038300 275 RAMVIEGWAPQM---KILGHPSIGGFVSH----CGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCG 347 (401)
Q Consensus 275 ~~~~~~~~~p~~---~~l~~~~~~~~i~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~ 347 (401)
..+.+.+|+++. ++++.+++ +|.- |--+++.||+++|+|+|+-... .... +.+.|.|+.+ .
T Consensus 311 ~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~----~~~e-~~~~~~g~~~-----~ 378 (439)
T 3fro_A 311 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRD-IITNETGILV-----K 378 (439)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESST----HHHH-HCCTTTCEEE-----C
T ss_pred CEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCCC----Ccce-eEEcCceEEe-----C
Confidence 455567888875 67889998 6633 2236899999999999997643 2333 3334688888 2
Q ss_pred CCCHHHHHHHHHHHhc-Cc-ccHHHHHHHHHHHHHHHhhc-HHHHHHHHHHHHhh
Q 038300 348 RIQREEMARVIKEVVM-ER-EGEKIKRKTREMGEKIKEKG-EEEIEWVADELIHL 399 (401)
Q Consensus 348 ~~~~~~l~~~i~~~l~-~~-~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~~~~ 399 (401)
.-+.+++.++|.++++ ++ .-..+.+++++.. ++.. ...+.++.+.+.++
T Consensus 379 ~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~---~~~s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 379 AGDPGELANAILKALELSRSDLSKFRENCKKRA---MSFSWEKSAERYVKAYTGS 430 (439)
T ss_dssp TTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH---HTSCHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH---hhCcHHHHHHHHHHHHHHH
Confidence 3478999999999997 42 2244555554443 3333 44455555555443
No 32
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.39 E-value=7.2e-05 Score=70.52 Aligned_cols=111 Identities=11% Similarity=0.133 Sum_probs=73.6
Q ss_pred CCceEEcccCchh---hhcccCCcceEEec----CC-chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccC
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVSH----CG-WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNK 345 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~h----gG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~ 345 (401)
..++.+.+++++. +++..+++ +|.- -| -+++.||+++|+|+|+.+. ......+.+.+.|+.+
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~~~g~~~---- 331 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADGDAGRLV---- 331 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTTTSSEEC----
T ss_pred cCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCCCceEEe----
Confidence 4578899999874 88899999 6643 23 3489999999999999866 3455566666778777
Q ss_pred CCCCCHHHHHHHHHHHhcCcccHHHHHHH-HHHHHHHHhhc-HHHHHHHHHHHHh
Q 038300 346 CGRIQREEMARVIKEVVMEREGEKIKRKT-REMGEKIKEKG-EEEIEWVADELIH 398 (401)
Q Consensus 346 ~~~~~~~~l~~~i~~~l~~~~~~~~~~~a-~~~~~~~~~~~-~~~~~~~v~~~~~ 398 (401)
..-+.+++.++|.++++ ++..+++. ++.++.++... ...+.++.+.+.+
T Consensus 332 -~~~d~~~l~~~i~~l~~---~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 382 (406)
T 2gek_A 332 -PVDDADGMAAALIGILE---DDQLRAGYVARASERVHRYDWSVVSAQIMRVYET 382 (406)
T ss_dssp -CTTCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHGGGGBHHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 23478999999999998 45433332 23333333233 3444444444433
No 33
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.30 E-value=6.6e-05 Score=73.16 Aligned_cols=79 Identities=16% Similarity=0.140 Sum_probs=58.9
Q ss_pred CCceEEcccCchh---hhcccC----CcceEEecC---C-chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeee
Q 038300 274 ERAMVIEGWAPQM---KILGHP----SIGGFVSHC---G-WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVR 342 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~----~~~~~i~hg---G-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~ 342 (401)
..++.+.+++|+. ++++.+ ++ ||.-+ | -+++.||+++|+|+|+-... -....+.+...|+.+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~~~g~l~- 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRNG----GPAEILDGGKYGVLV- 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESSB----HHHHHTGGGTSSEEE-
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecCC----CHHHHhcCCceEEEe-
Confidence 3468888999754 788888 88 76432 3 35899999999999998643 334444455578888
Q ss_pred ccCCCCCCHHHHHHHHHHHhc
Q 038300 343 RNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 343 ~~~~~~~~~~~l~~~i~~~l~ 363 (401)
. .-+.+++.++|.++++
T Consensus 407 --~--~~d~~~la~~i~~ll~ 423 (499)
T 2r60_A 407 --D--PEDPEDIARGLLKAFE 423 (499)
T ss_dssp --C--TTCHHHHHHHHHHHHS
T ss_pred --C--CCCHHHHHHHHHHHHh
Confidence 2 3478999999999998
No 34
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.04 E-value=1.3e-05 Score=75.09 Aligned_cols=83 Identities=19% Similarity=0.248 Sum_probs=63.5
Q ss_pred CceEEcccCch---hhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCH
Q 038300 275 RAMVIEGWAPQ---MKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQR 351 (401)
Q Consensus 275 ~~~~~~~~~p~---~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~ 351 (401)
.++.+.+++++ .++|+.+++ ||+.+| |.+.||+++|+|+|+.+..+++.. +.+.|.|+.+ . .+.
T Consensus 255 ~~v~~~g~~g~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~g~g~lv---~---~d~ 321 (376)
T 1v4v_A 255 RNFVLLDPLEYGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKAGILKLA---G---TDP 321 (376)
T ss_dssp TTEEEECCCCHHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHHTSEEEC---C---SCH
T ss_pred CCEEEECCCCHHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcCCceEEC---C---CCH
Confidence 47888755554 489999999 999884 446699999999999987666665 3466888877 2 389
Q ss_pred HHHHHHHHHHhcCcccHHHHHH
Q 038300 352 EEMARVIKEVVMEREGEKIKRK 373 (401)
Q Consensus 352 ~~l~~~i~~~l~~~~~~~~~~~ 373 (401)
+++.++|.++++ ++..+++
T Consensus 322 ~~la~~i~~ll~---d~~~~~~ 340 (376)
T 1v4v_A 322 EGVYRVVKGLLE---NPEELSR 340 (376)
T ss_dssp HHHHHHHHHHHT---CHHHHHH
T ss_pred HHHHHHHHHHHh---ChHhhhh
Confidence 999999999998 5544443
No 35
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.03 E-value=1.2e-05 Score=75.41 Aligned_cols=82 Identities=13% Similarity=0.234 Sum_probs=62.7
Q ss_pred CceEEcccCch---hhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCH
Q 038300 275 RAMVIEGWAPQ---MKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQR 351 (401)
Q Consensus 275 ~~~~~~~~~p~---~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~ 351 (401)
.++.+.+++++ .++|+.+++ ||+.+|. .+.||+++|+|+|+.+..+.... +.+.|.|+.+ .. +.
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~e----~v~~g~g~lv---~~---d~ 329 (384)
T 1vgv_A 263 KNVILIDPQEYLPFVWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERPE----AVTAGTVRLV---GT---DK 329 (384)
T ss_dssp TTEEEECCCCHHHHHHHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSCHH----HHHHTSEEEE---CS---SH
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCcch----hhhCCceEEe---CC---CH
Confidence 47888665553 388999999 9999864 48899999999999997544332 4566889888 32 89
Q ss_pred HHHHHHHHHHhcCcccHHHHH
Q 038300 352 EEMARVIKEVVMEREGEKIKR 372 (401)
Q Consensus 352 ~~l~~~i~~~l~~~~~~~~~~ 372 (401)
+++.++|.++++ ++..++
T Consensus 330 ~~la~~i~~ll~---d~~~~~ 347 (384)
T 1vgv_A 330 QRIVEEVTRLLK---DENEYQ 347 (384)
T ss_dssp HHHHHHHHHHHH---CHHHHH
T ss_pred HHHHHHHHHHHh---ChHHHh
Confidence 999999999998 554433
No 36
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=97.80 E-value=0.00016 Score=59.84 Aligned_cols=79 Identities=16% Similarity=0.184 Sum_probs=60.2
Q ss_pred CCceEEcccCch---hhhcccCCcceEEe---cCCc-hhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCC
Q 038300 274 ERAMVIEGWAPQ---MKILGHPSIGGFVS---HCGW-SSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKC 346 (401)
Q Consensus 274 ~~~~~~~~~~p~---~~~l~~~~~~~~i~---hgG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~ 346 (401)
..++.+.+|+++ ..+++.+++ +|. +.|+ .++.||+++|+|+|+... ..+...+.+.+.|+.+
T Consensus 77 ~~~v~~~g~~~~~e~~~~~~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~~~g~~~----- 145 (177)
T 2f9f_A 77 PDNVKFLGSVSEEELIDLYSRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINEKTGYLV----- 145 (177)
T ss_dssp CTTEEEEESCCHHHHHHHHHHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBTTTEEEE-----
T ss_pred CCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCCCccEEe-----
Confidence 458888899997 388999999 765 3344 489999999999999764 3445555555677766
Q ss_pred CCCCHHHHHHHHHHHhcC
Q 038300 347 GRIQREEMARVIKEVVME 364 (401)
Q Consensus 347 ~~~~~~~l~~~i~~~l~~ 364 (401)
.-+.+++.++|.+++++
T Consensus 146 -~~d~~~l~~~i~~l~~~ 162 (177)
T 2f9f_A 146 -NADVNEIIDAMKKVSKN 162 (177)
T ss_dssp -CSCHHHHHHHHHHHHHC
T ss_pred -CCCHHHHHHHHHHHHhC
Confidence 13789999999999974
No 37
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=97.58 E-value=0.00015 Score=67.59 Aligned_cols=82 Identities=12% Similarity=0.201 Sum_probs=61.8
Q ss_pred CceEEcccCchh---hhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCH
Q 038300 275 RAMVIEGWAPQM---KILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQR 351 (401)
Q Consensus 275 ~~~~~~~~~p~~---~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~ 351 (401)
.++.+.+++++. .+|+.+++ ||+.+| +.+.||+++|+|+|+....+... .+.+.|.|+.+ . . +.
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~----e~v~~g~g~~v---~--~-d~ 329 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP----EGIEAGTLKLA---G--T-DE 329 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH----HHHHTTSEEEC---C--S-CH
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc----eeecCCceEEc---C--C-CH
Confidence 578886776653 88889999 999874 55889999999999986534332 24566788877 2 2 88
Q ss_pred HHHHHHHHHHhcCcccHHHHH
Q 038300 352 EEMARVIKEVVMEREGEKIKR 372 (401)
Q Consensus 352 ~~l~~~i~~~l~~~~~~~~~~ 372 (401)
+++.++|.++++ ++..++
T Consensus 330 ~~la~~i~~ll~---~~~~~~ 347 (375)
T 3beo_A 330 ETIFSLADELLS---DKEAHD 347 (375)
T ss_dssp HHHHHHHHHHHH---CHHHHH
T ss_pred HHHHHHHHHHHh---ChHhHh
Confidence 999999999998 554443
No 38
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=97.42 E-value=0.00071 Score=62.79 Aligned_cols=80 Identities=10% Similarity=0.278 Sum_probs=62.5
Q ss_pred CCceEEcccCchh-hhcccCCcceEEe----cCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCC
Q 038300 274 ERAMVIEGWAPQM-KILGHPSIGGFVS----HCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGR 348 (401)
Q Consensus 274 ~~~~~~~~~~p~~-~~l~~~~~~~~i~----hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~ 348 (401)
..++.+.++..+. ++++.+++ +|. -|.-+++.||+++|+|+|+.... -+...+.+.+.|+.+ . ..
T Consensus 252 ~~~v~~~g~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~~~g~~~---~-~~ 321 (374)
T 2iw1_A 252 RSNVHFFSGRNDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYIADANCGTVI---A-EP 321 (374)
T ss_dssp GGGEEEESCCSCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHHHHHTCEEEE---C-SS
T ss_pred CCcEEECCCcccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecCC----CchhhhccCCceEEe---C-CC
Confidence 3578887876554 89999999 775 34567899999999999998764 345567777899988 2 13
Q ss_pred CCHHHHHHHHHHHhc
Q 038300 349 IQREEMARVIKEVVM 363 (401)
Q Consensus 349 ~~~~~l~~~i~~~l~ 363 (401)
-+.+++.++|.++++
T Consensus 322 ~~~~~l~~~i~~l~~ 336 (374)
T 2iw1_A 322 FSQEQLNEVLRKALT 336 (374)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHc
Confidence 478999999999998
No 39
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.24 E-value=0.00047 Score=64.51 Aligned_cols=94 Identities=19% Similarity=0.302 Sum_probs=65.7
Q ss_pred ceEEcccCchh-hhcccCCcceEEec-----CCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCC
Q 038300 276 AMVIEGWAPQM-KILGHPSIGGFVSH-----CGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRI 349 (401)
Q Consensus 276 ~~~~~~~~p~~-~~l~~~~~~~~i~h-----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~ 349 (401)
++.+.++..+. .+++.+++ |+.- +|-.++.||+++|+|+|+-|..++.......+.+.|.++.. -
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~-------~ 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEV-------K 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEEC-------C
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEe-------C
Confidence 35555555444 88989988 6642 23478999999999999877777777777666667887765 2
Q ss_pred CHHHHHHHHHHHhcCcccHHHHHHHHHHH
Q 038300 350 QREEMARVIKEVVMEREGEKIKRKTREMG 378 (401)
Q Consensus 350 ~~~~l~~~i~~~l~~~~~~~~~~~a~~~~ 378 (401)
+.+++.++|.++++++.-..+.+++++..
T Consensus 332 d~~~La~ai~~ll~d~~r~~mg~~ar~~~ 360 (374)
T 2xci_A 332 NETELVTKLTELLSVKKEIKVEEKSREIK 360 (374)
T ss_dssp SHHHHHHHHHHHHHSCCCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 67999999999997411234555555443
No 40
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=97.23 E-value=0.002 Score=60.87 Aligned_cols=110 Identities=15% Similarity=0.141 Sum_probs=73.5
Q ss_pred CCceEEcccCc-----hh-hhcccCCcceEEecC----CchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeec
Q 038300 274 ERAMVIEGWAP-----QM-KILGHPSIGGFVSHC----GWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRR 343 (401)
Q Consensus 274 ~~~~~~~~~~p-----~~-~~l~~~~~~~~i~hg----G~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~ 343 (401)
..++.+.+|++ +. ++++.+++ ||.-+ .-+++.||+++|+|+|+.+.. -+...+.+.+.|+.+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~~----g~~e~i~~~~~g~l~-- 363 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAVG----GIKFQIVDGETGFLV-- 363 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESCH----HHHHHCCBTTTEEEE--
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccCC----CChhheecCCCeEEE--
Confidence 35788888765 22 78888999 77654 346899999999999997752 345555556788888
Q ss_pred cCCCCCCHHHHHHHHHHHhcCcccHHHHHHH-HHHHHHHHh-hc-HHHHHHHHHHHHhh
Q 038300 344 NKCGRIQREEMARVIKEVVMEREGEKIKRKT-REMGEKIKE-KG-EEEIEWVADELIHL 399 (401)
Q Consensus 344 ~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a-~~~~~~~~~-~~-~~~~~~~v~~~~~~ 399 (401)
+ +.+++.++|.++++ ++..+++. ++..+.+.+ .. ...+.++.+.+.++
T Consensus 364 -~----d~~~la~~i~~ll~---~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 364 -R----DANEAVEVVLYLLK---HPEVSKEMGAKAKERVRKNFIITKHMERYLDILNSL 414 (416)
T ss_dssp -S----SHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC
T ss_pred -C----CHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHh
Confidence 2 78999999999998 55444332 233333332 33 44555555555544
No 41
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.15 E-value=0.001 Score=61.22 Aligned_cols=109 Identities=17% Similarity=0.156 Sum_probs=77.6
Q ss_pred ceEEcccCchhh---hcccCCcceEEecCCc---------hhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeec
Q 038300 276 AMVIEGWAPQMK---ILGHPSIGGFVSHCGW---------SSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRR 343 (401)
Q Consensus 276 ~~~~~~~~p~~~---~l~~~~~~~~i~hgG~---------~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~ 343 (401)
|+...+|+|+.+ +|+.++.+.+..-+.+ +-+.|++++|+|+|+.+ ...++..+++.|+|+.+
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~~~G~~~-- 288 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENNGLGWIV-- 288 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHHTCEEEE--
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhCCeEEEe--
Confidence 888999999874 4555566555422222 35889999999999865 45677888889999988
Q ss_pred cCCCCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc--HHHHHHHHHHH
Q 038300 344 NKCGRIQREEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG--EEEIEWVADEL 396 (401)
Q Consensus 344 ~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~v~~~ 396 (401)
+ +.+++.++|..+.. ++-..+++++++.++.++.+- .+.+.+.+.++
T Consensus 289 -~----~~~e~~~~i~~l~~-~~~~~m~~na~~~a~~~~~~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 289 -K----DVEEAIMKVKNVNE-DEYIELVKNVRSFNPILRKGFFTRRLLTESVFQA 337 (339)
T ss_dssp -S----SHHHHHHHHHHCCH-HHHHHHHHHHHHHTHHHHTTHHHHHHHHHHHHHH
T ss_pred -C----CHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 3 46888888887653 223577888888888877755 55666555544
No 42
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=97.14 E-value=0.0028 Score=58.14 Aligned_cols=77 Identities=14% Similarity=0.128 Sum_probs=59.4
Q ss_pred CceEEcccCchh---hhcccCCcceEEe--c-----------CC-chhHHHHHHhCCcEEecCCccchhhHHHHHHh--h
Q 038300 275 RAMVIEGWAPQM---KILGHPSIGGFVS--H-----------CG-WSSVMESMRLGVPIIAMPMHVDQPLNARLVED--V 335 (401)
Q Consensus 275 ~~~~~~~~~p~~---~~l~~~~~~~~i~--h-----------gG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~--~ 335 (401)
.++.+.+|+++. ++++.+++ +|. + -| -+++.||+++|+|+|+....+ +...+.+ .
T Consensus 212 ~~v~~~g~~~~~~l~~~~~~adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~----~~e~~~~~~~ 285 (342)
T 2iuy_A 212 STVEPIGEVGGERRLDLLASAHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGC----LAEIVPSVGE 285 (342)
T ss_dssp TTEEECCCCCHHHHHHHHHHCSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTT----HHHHGGGGEE
T ss_pred CCEEEeccCCHHHHHHHHHhCCE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCC----hHHHhcccCC
Confidence 689999999875 88999999 663 2 22 358999999999999987643 5555555 4
Q ss_pred CeeeeeeccCCCCCCHHHHHHHHHHHhc
Q 038300 336 GIGLEVRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 336 g~g~~l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
+.|+.+ .. +.+++.++|.++++
T Consensus 286 ~~g~~~-----~~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 286 VVGYGT-----DF-APDEARRTLAGLPA 307 (342)
T ss_dssp ECCSSS-----CC-CHHHHHHHHHTSCC
T ss_pred CceEEc-----CC-CHHHHHHHHHHHHH
Confidence 567766 34 89999999999885
No 43
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.13 E-value=0.011 Score=58.24 Aligned_cols=90 Identities=10% Similarity=0.147 Sum_probs=64.4
Q ss_pred CceEEcccCchh---hhcccCCcceEEe---cCCchhHHHHHHhCCcEEecCCccchhh-HHHHHHhhCeeeeeeccCCC
Q 038300 275 RAMVIEGWAPQM---KILGHPSIGGFVS---HCGWSSVMESMRLGVPIIAMPMHVDQPL-NARLVEDVGIGLEVRRNKCG 347 (401)
Q Consensus 275 ~~~~~~~~~p~~---~~l~~~~~~~~i~---hgG~~s~~eal~~GvP~i~~P~~~dQ~~-na~~~~~~g~g~~l~~~~~~ 347 (401)
.++.+.+++++. .+++.+++ ||. .|+-+++.||+++|+|+|+.|-..-... .+..+...|+.-.+ ..
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v---~~- 507 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMN---VA- 507 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGB---CS-
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhh---cC-
Confidence 578888999743 77899999 762 2455689999999999999875322222 24455566887666 22
Q ss_pred CCCHHHHHHHHHHHhcCcccHHHHHHHH
Q 038300 348 RIQREEMARVIKEVVMEREGEKIKRKTR 375 (401)
Q Consensus 348 ~~~~~~l~~~i~~~l~~~~~~~~~~~a~ 375 (401)
+.+++.++|.++++ ++..+++..
T Consensus 508 --~~~~la~~i~~l~~---~~~~~~~~~ 530 (568)
T 2vsy_A 508 --DDAAFVAKAVALAS---DPAALTALH 530 (568)
T ss_dssp --SHHHHHHHHHHHHH---CHHHHHHHH
T ss_pred --CHHHHHHHHHHHhc---CHHHHHHHH
Confidence 78999999999998 555544433
No 44
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.07 E-value=0.0079 Score=56.59 Aligned_cols=82 Identities=13% Similarity=0.120 Sum_probs=54.9
Q ss_pred eEEcccCchh---hhcccCCcceEEec----CCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCe------------
Q 038300 277 MVIEGWAPQM---KILGHPSIGGFVSH----CGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGI------------ 337 (401)
Q Consensus 277 ~~~~~~~p~~---~~l~~~~~~~~i~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~------------ 337 (401)
+.+.+|+++. ++++.+++ ||.- |.-.++.||+++|+|+|+-... -+...+.+...
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~~~~~i~~~~~~~~~ 329 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSGDCVYKIKPSAWISVD 329 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCTTTSEEECCCEEEECT
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHccCcccccccccccccc
Confidence 6667888854 78889999 6632 2235899999999999996643 23333332221
Q ss_pred ---ee--eeeccCCCCCCHHHHHHHHHHHhcCcccHHHHHH
Q 038300 338 ---GL--EVRRNKCGRIQREEMARVIKEVVMEREGEKIKRK 373 (401)
Q Consensus 338 ---g~--~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~ 373 (401)
|+ .+ . .-+.+++.++| ++++ ++..+++
T Consensus 330 ~~~G~~gl~---~--~~d~~~la~~i-~l~~---~~~~~~~ 361 (413)
T 3oy2_A 330 DRDGIGGIE---G--IIDVDDLVEAF-TFFK---DEKNRKE 361 (413)
T ss_dssp TTCSSCCEE---E--ECCHHHHHHHH-HHTT---SHHHHHH
T ss_pred cccCcceee---C--CCCHHHHHHHH-HHhc---CHHHHHH
Confidence 55 55 1 23899999999 9998 5554433
No 45
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=96.89 E-value=0.0055 Score=51.25 Aligned_cols=77 Identities=16% Similarity=0.138 Sum_probs=58.2
Q ss_pred ceEE-cccCchh---hhcccCCcceEEecC---C-chhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCC
Q 038300 276 AMVI-EGWAPQM---KILGHPSIGGFVSHC---G-WSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCG 347 (401)
Q Consensus 276 ~~~~-~~~~p~~---~~l~~~~~~~~i~hg---G-~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~ 347 (401)
++.+ .+++++. .++..+++ +|.-. | -.++.||+++|+|+|+.... .+...+ +.+.|+.+ .
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~~~~g~~~-----~ 163 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-TNETGILV-----K 163 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-CTTTCEEE-----C
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-CCCceEEe-----c
Confidence 7888 8999843 88889998 76533 2 35799999999999997643 344444 55678877 2
Q ss_pred CCCHHHHHHHHHHHhc-C
Q 038300 348 RIQREEMARVIKEVVM-E 364 (401)
Q Consensus 348 ~~~~~~l~~~i~~~l~-~ 364 (401)
.-+.+++.++|.++++ +
T Consensus 164 ~~~~~~l~~~i~~l~~~~ 181 (200)
T 2bfw_A 164 AGDPGELANAILKALELS 181 (200)
T ss_dssp TTCHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHhcC
Confidence 3378999999999997 5
No 46
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=96.38 E-value=0.04 Score=54.21 Aligned_cols=127 Identities=12% Similarity=0.086 Sum_probs=76.0
Q ss_pred hCCCHHHHHHHHHHHHhCCCceEEee--cCCCCCCCcccccCchhHHHhhcCCceEEcccCchh---hhcccCCcceEEe
Q 038300 225 YFLSKEEMEDIALGLELSGVNFIWVV--RFPCGAKVKVDEELPESFLERTKERAMVIEGWAPQM---KILGHPSIGGFVS 299 (401)
Q Consensus 225 ~~~~~~~~~~~~~~l~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~l~~~~~~~~i~ 299 (401)
....++.+...++-|.+.+..++|.. +...+. ...+-..+...--...+++.+.+|.. ..+..+|+ |+.
T Consensus 451 ~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~----~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDI--fLD 524 (631)
T 3q3e_A 451 MKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGI----THPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCDM--MVN 524 (631)
T ss_dssp TTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGG----GHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCSE--EEC
T ss_pred ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchh----hHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCcE--EEe
Confidence 44566677777777777777777753 321111 11111111111112467777888866 45578888 764
Q ss_pred c---CCchhHHHHHHhCCcEEecCCccchhhH-HHHHHhhCeeee-eeccCCCCCCHHHHHHHHHHHhc
Q 038300 300 H---CGWSSVMESMRLGVPIIAMPMHVDQPLN-ARLVEDVGIGLE-VRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 300 h---gG~~s~~eal~~GvP~i~~P~~~dQ~~n-a~~~~~~g~g~~-l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
- +|..|++||+++|||+|+.+-..-.-.. +..+...|..-+ +. -+.++..+..-++.+
T Consensus 525 pfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA------~d~eeYv~~Av~La~ 587 (631)
T 3q3e_A 525 PFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA------NTVDEYVERAVRLAE 587 (631)
T ss_dssp CSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEE------SSHHHHHHHHHHHHH
T ss_pred CCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceec------CCHHHHHHHHHHHhC
Confidence 3 6789999999999999999864332233 334445677653 41 257777666667777
No 47
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=96.29 E-value=0.076 Score=53.97 Aligned_cols=127 Identities=15% Similarity=0.222 Sum_probs=81.3
Q ss_pred HhCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHH-hhcCCceEEcccCchh---hhcccCCcceEEe
Q 038300 224 EYFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLE-RTKERAMVIEGWAPQM---KILGHPSIGGFVS 299 (401)
Q Consensus 224 ~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~---~~l~~~~~~~~i~ 299 (401)
...++++.+...++-|++.+-.++|..+..... ...+-..+.+ .+....+++.+..|.. ..+..+|+ ++.
T Consensus 532 ~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~----~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~~Di--~LD 605 (723)
T 4gyw_A 532 LYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG----EPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADV--CLD 605 (723)
T ss_dssp GGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG----HHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGGCSE--EEC
T ss_pred cccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH----HHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCCCeE--EeC
Confidence 566888888888899998888899987643110 0111111111 1223457777777755 55567777 876
Q ss_pred ---cCCchhHHHHHHhCCcEEecCCccchhh-HHHHHHhhCeeeeeeccCCCCCCHHH-HHHHHHHHhc
Q 038300 300 ---HCGWSSVMESMRLGVPIIAMPMHVDQPL-NARLVEDVGIGLEVRRNKCGRIQREE-MARVIKEVVM 363 (401)
Q Consensus 300 ---hgG~~s~~eal~~GvP~i~~P~~~dQ~~-na~~~~~~g~g~~l~~~~~~~~~~~~-l~~~i~~~l~ 363 (401)
.+|.+|++|||++|||+|.+|-..---. -+-.+...|+.-.+ . -+.++ +..|| ++-.
T Consensus 606 t~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~i---a---~~~~~Y~~~a~-~la~ 667 (723)
T 4gyw_A 606 TPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELI---A---KNRQEYEDIAV-KLGT 667 (723)
T ss_dssp CSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGB---C---SSHHHHHHHHH-HHHH
T ss_pred CCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccc---c---CCHHHHHHHHH-HHhc
Confidence 7888999999999999999995332222 34445556888766 1 24555 45555 4444
No 48
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=96.27 E-value=0.013 Score=47.25 Aligned_cols=75 Identities=15% Similarity=0.182 Sum_probs=49.6
Q ss_pred ceEEcccCchh---hhcccCCcceEEec----CCchhHHHHHHhCC-cEEecCCccchhhHHHHHHhhCeeeeeeccCCC
Q 038300 276 AMVIEGWAPQM---KILGHPSIGGFVSH----CGWSSVMESMRLGV-PIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCG 347 (401)
Q Consensus 276 ~~~~~~~~p~~---~~l~~~~~~~~i~h----gG~~s~~eal~~Gv-P~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~ 347 (401)
++.+ +|+|+. ++++.+++ +|.- +.-.++.||+++|+ |+|+-...+.-.. .+.+.+. .+ .
T Consensus 57 ~v~~-g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~---~~~~~~~--~~-----~ 123 (166)
T 3qhp_A 57 KAEF-GFVNSNELLEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSATRQ---FALDERS--LF-----E 123 (166)
T ss_dssp EEEC-CCCCHHHHHHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGG---GCSSGGG--EE-----C
T ss_pred eEEE-eecCHHHHHHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhh---hccCCce--EE-----c
Confidence 6777 898864 78889998 7752 23458999999996 9999332111111 1111222 33 2
Q ss_pred CCCHHHHHHHHHHHhc
Q 038300 348 RIQREEMARVIKEVVM 363 (401)
Q Consensus 348 ~~~~~~l~~~i~~~l~ 363 (401)
.-+.+++.++|.+++.
T Consensus 124 ~~~~~~l~~~i~~l~~ 139 (166)
T 3qhp_A 124 PNNAKDLSAKIDWWLE 139 (166)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh
Confidence 3478999999999998
No 49
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=96.17 E-value=0.039 Score=53.05 Aligned_cols=77 Identities=12% Similarity=0.112 Sum_probs=54.5
Q ss_pred CceE-EcccCchh--hhcccCCcceEEec----CCchhHHHHHHhCCcEEecCCccchhhHHHHHHhh---------Cee
Q 038300 275 RAMV-IEGWAPQM--KILGHPSIGGFVSH----CGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDV---------GIG 338 (401)
Q Consensus 275 ~~~~-~~~~~p~~--~~l~~~~~~~~i~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~---------g~g 338 (401)
.++. +.++..+. .+++.+++ ||.- |--+++.||+++|+|+|+.... -+...+.+. +.|
T Consensus 346 ~~v~~~~g~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~e~v~~~~~~~~~~~~~~G 419 (485)
T 1rzu_A 346 GRVGVAIGYNEPLSHLMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLADTVIDANHAALASKAATG 419 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCBCCHHHHHTTCCCB
T ss_pred CcEEEecCCCHHHHHHHHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCCC----ChhheecccccccccccCCcc
Confidence 4676 56773332 78999999 7743 2246899999999999997653 233334333 578
Q ss_pred eeeeccCCCCCCHHHHHHHHHHHh
Q 038300 339 LEVRRNKCGRIQREEMARVIKEVV 362 (401)
Q Consensus 339 ~~l~~~~~~~~~~~~l~~~i~~~l 362 (401)
+.+ + .-+.+++.++|.+++
T Consensus 420 ~l~---~--~~d~~~la~~i~~ll 438 (485)
T 1rzu_A 420 VQF---S--PVTLDGLKQAIRRTV 438 (485)
T ss_dssp EEE---S--SCSHHHHHHHHHHHH
T ss_pred eEe---C--CCCHHHHHHHHHHHH
Confidence 888 2 347899999999999
No 50
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=96.12 E-value=0.057 Score=51.90 Aligned_cols=77 Identities=13% Similarity=0.152 Sum_probs=54.3
Q ss_pred CceE-EcccCchh--hhcccCCcceEEecC----CchhHHHHHHhCCcEEecCCccchhhHHHHHHhh---------Cee
Q 038300 275 RAMV-IEGWAPQM--KILGHPSIGGFVSHC----GWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDV---------GIG 338 (401)
Q Consensus 275 ~~~~-~~~~~p~~--~~l~~~~~~~~i~hg----G~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~---------g~g 338 (401)
.++. +.++..+. .+++.+++ ||.-+ .-+++.||+++|+|+|+-... -+...+.+. +.|
T Consensus 347 ~~v~~~~g~~~~~~~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~e~v~~~~~~~~~~~~~~G 420 (485)
T 2qzs_A 347 GQVGVQIGYHEAFSHRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLADTVSDCSLENLADGVASG 420 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCBCCHHHHHTTCCCB
T ss_pred CcEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCCC----CccceeccCccccccccccce
Confidence 4675 66774332 78999999 76432 245889999999999998653 233334433 578
Q ss_pred eeeeccCCCCCCHHHHHHHHHHHh
Q 038300 339 LEVRRNKCGRIQREEMARVIKEVV 362 (401)
Q Consensus 339 ~~l~~~~~~~~~~~~l~~~i~~~l 362 (401)
+.+ ..-+.+++.++|.+++
T Consensus 421 ~l~-----~~~d~~~la~~i~~ll 439 (485)
T 2qzs_A 421 FVF-----EDSNAWSLLRAIRRAF 439 (485)
T ss_dssp EEE-----CSSSHHHHHHHHHHHH
T ss_pred EEE-----CCCCHHHHHHHHHHHH
Confidence 888 2347899999999999
No 51
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=94.18 E-value=0.19 Score=51.50 Aligned_cols=77 Identities=14% Similarity=0.133 Sum_probs=51.0
Q ss_pred CceEEcccC----chhhhc---c-cCCcceEEec----CCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeee
Q 038300 275 RAMVIEGWA----PQMKIL---G-HPSIGGFVSH----CGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVR 342 (401)
Q Consensus 275 ~~~~~~~~~----p~~~~l---~-~~~~~~~i~h----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~ 342 (401)
.++.+.++. ++.++. . .+++ ||.- +--.++.||+++|+|+|+-... -....+.+.+.|+.+
T Consensus 640 ~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd~G----G~~EiV~dg~~Gllv- 712 (816)
T 3s28_A 640 GQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVHGKSGFHI- 712 (816)
T ss_dssp BBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEESSB----THHHHCCBTTTBEEE-
T ss_pred CcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeCCC----ChHHHHccCCcEEEe-
Confidence 567776643 334443 3 4567 7743 2235899999999999996433 344444555678888
Q ss_pred ccCCCCCCHHHHHHHHHHHh
Q 038300 343 RNKCGRIQREEMARVIKEVV 362 (401)
Q Consensus 343 ~~~~~~~~~~~l~~~i~~~l 362 (401)
+.-+.+++.++|.+++
T Consensus 713 ----~p~D~e~LA~aI~~lL 728 (816)
T 3s28_A 713 ----DPYHGDQAADTLADFF 728 (816)
T ss_dssp ----CTTSHHHHHHHHHHHH
T ss_pred ----CCCCHHHHHHHHHHHH
Confidence 2347899999997766
No 52
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=94.13 E-value=0.023 Score=53.71 Aligned_cols=83 Identities=16% Similarity=0.101 Sum_probs=55.8
Q ss_pred ceEEcccCchh---hhcccCCcceEEecC---Cc-hhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCC
Q 038300 276 AMVIEGWAPQM---KILGHPSIGGFVSHC---GW-SSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGR 348 (401)
Q Consensus 276 ~~~~~~~~p~~---~~l~~~~~~~~i~hg---G~-~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~ 348 (401)
++.+.+++|+. ++++.+++ ||.-+ |. +++.||+++|+|+|+ -..+- ...+.+...|+.+ ..
T Consensus 296 ~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g~----~e~v~~~~~G~lv-----~~ 363 (413)
T 2x0d_A 296 HLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYEN----KDLSNWHSNIVSL-----EQ 363 (413)
T ss_dssp EEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBTT----BCGGGTBTTEEEE-----SS
T ss_pred cEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCCc----chhhhcCCCEEEe-----CC
Confidence 67788898765 78889999 76422 33 468999999999998 33221 1223333568877 23
Q ss_pred CCHHHHHHHHHHHhcCcccHHHHHH
Q 038300 349 IQREEMARVIKEVVMEREGEKIKRK 373 (401)
Q Consensus 349 ~~~~~l~~~i~~~l~~~~~~~~~~~ 373 (401)
-+++++.++|.++++ ++..+++
T Consensus 364 ~d~~~la~ai~~ll~---~~~~~~~ 385 (413)
T 2x0d_A 364 LNPENIAETLVELCM---SFNNRDV 385 (413)
T ss_dssp CSHHHHHHHHHHHHH---HTC----
T ss_pred CCHHHHHHHHHHHHc---CHHHHHH
Confidence 478999999999998 4444444
No 53
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=93.68 E-value=0.093 Score=49.31 Aligned_cols=73 Identities=10% Similarity=0.039 Sum_probs=55.5
Q ss_pred CceEEcccCchh---hhcccCCcceEEe--c-CC-chhHHHHH-------HhCCcEEecCCccchhhHHHHHHhhCeeee
Q 038300 275 RAMVIEGWAPQM---KILGHPSIGGFVS--H-CG-WSSVMESM-------RLGVPIIAMPMHVDQPLNARLVEDVGIGLE 340 (401)
Q Consensus 275 ~~~~~~~~~p~~---~~l~~~~~~~~i~--h-gG-~~s~~eal-------~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~ 340 (401)
.++.+.+++|+. ++++.+++ ||. + -| -+++.||+ ++|+|+|+-.. +.+...|+.
T Consensus 265 ~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~~~G~l 332 (406)
T 2hy7_A 265 DNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGPYKSRF 332 (406)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCSCSSEE
T ss_pred CCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccCcceEE
Confidence 378888999864 77889998 663 2 23 35789999 99999999765 444456777
Q ss_pred -eeccCCCCCCHHHHHHHHHHHhcC
Q 038300 341 -VRRNKCGRIQREEMARVIKEVVME 364 (401)
Q Consensus 341 -l~~~~~~~~~~~~l~~~i~~~l~~ 364 (401)
+ . .-+.+++.++|.+++++
T Consensus 333 ~v---~--~~d~~~la~ai~~ll~~ 352 (406)
T 2hy7_A 333 GY---T--PGNADSVIAAITQALEA 352 (406)
T ss_dssp EE---C--TTCHHHHHHHHHHHHHC
T ss_pred Ee---C--CCCHHHHHHHHHHHHhC
Confidence 7 2 23789999999999974
No 54
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=90.47 E-value=2.5 Score=40.47 Aligned_cols=105 Identities=13% Similarity=0.066 Sum_probs=66.2
Q ss_pred EcccCchh---hhcccCCcceEEec---CCch-hHHHHHHhCC-----cEEecCCccchhhHHHHHHhhCeeeeeeccCC
Q 038300 279 IEGWAPQM---KILGHPSIGGFVSH---CGWS-SVMESMRLGV-----PIIAMPMHVDQPLNARLVEDVGIGLEVRRNKC 346 (401)
Q Consensus 279 ~~~~~p~~---~~l~~~~~~~~i~h---gG~~-s~~eal~~Gv-----P~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~ 346 (401)
+.+++++. .+++.+++ ||.- =|+| ++.||+++|+ |+|+--..+--... ..|+.+
T Consensus 336 ~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l-------~~g~lv----- 401 (482)
T 1uqt_A 336 LNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL-------TSALIV----- 401 (482)
T ss_dssp ECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC-------TTSEEE-----
T ss_pred eCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh-------CCeEEE-----
Confidence 35677765 67888999 6643 2554 8899999998 67765543321111 146667
Q ss_pred CCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc-HHHHHHHHHHHHh
Q 038300 347 GRIQREEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG-EEEIEWVADELIH 398 (401)
Q Consensus 347 ~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~~~ 398 (401)
...+.++++++|.++|+++ ....+++.++..+.+++.. ..-+.++++.+.+
T Consensus 402 ~p~d~~~lA~ai~~lL~~~-~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~ 453 (482)
T 1uqt_A 402 NPYDRDEVAAALDRALTMS-LAERISRHAEMLDVIVKNDINHWQECFISDLKQ 453 (482)
T ss_dssp CTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 3357899999999999731 2234455556666665555 4555666655543
No 55
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=88.34 E-value=4.9 Score=39.05 Aligned_cols=93 Identities=13% Similarity=0.115 Sum_probs=55.5
Q ss_pred CCceEEcccCchh---hhcccCCcceEEec-----CCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccC
Q 038300 274 ERAMVIEGWAPQM---KILGHPSIGGFVSH-----CGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNK 345 (401)
Q Consensus 274 ~~~~~~~~~~p~~---~~l~~~~~~~~i~h-----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~ 345 (401)
+.++.+..+.+.. .+++.+++ ||.= +| .+++||+++|+|+|+-...+ ....+.+..-|.......
T Consensus 381 ~~~v~~~~~~~~~~~~~~~~~aD~--~v~PS~~E~fg-l~~lEAma~G~PvI~s~~gG----~~e~V~dg~~G~~~~~~~ 453 (536)
T 3vue_A 381 PGKVRAVVKFNAPLAHLIMAGADV--LAVPSRFEPCG-LIQLQGMRYGTPCACASTGG----LVDTVIEGKTGFHMGRLS 453 (536)
T ss_dssp TTTEEEECSCCHHHHHHHHHHCSE--EEECCSCCSSC-SHHHHHHHTTCCEEECSCTH----HHHHCCBTTTEEECCCCC
T ss_pred CCceEEEEeccHHHHHHHHHhhhe--eecccccCCCC-HHHHHHHHcCCCEEEcCCCC----chheeeCCCCccccccCC
Confidence 3456666666553 67888888 7753 33 48999999999999976532 233334433454331100
Q ss_pred -----CCCCCHHHHHHHHHHHhcCcccHHHHHH
Q 038300 346 -----CGRIQREEMARVIKEVVMEREGEKIKRK 373 (401)
Q Consensus 346 -----~~~~~~~~l~~~i~~~l~~~~~~~~~~~ 373 (401)
.+..+.+++.++|++++.--.++.+++.
T Consensus 454 ~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~ 486 (536)
T 3vue_A 454 VDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEM 486 (536)
T ss_dssp SCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHH
T ss_pred CceeEECCCCHHHHHHHHHHHHHhcCcHHHHHH
Confidence 1223568899999887741114555443
No 56
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=81.94 E-value=12 Score=35.72 Aligned_cols=108 Identities=11% Similarity=0.041 Sum_probs=69.4
Q ss_pred ceEEcccCchh---hhcccCCcceEEe---cCCchh-HHHHHHhC---CcEEecCCccchhhHHHHHHhhCeeeeeeccC
Q 038300 276 AMVIEGWAPQM---KILGHPSIGGFVS---HCGWSS-VMESMRLG---VPIIAMPMHVDQPLNARLVEDVGIGLEVRRNK 345 (401)
Q Consensus 276 ~~~~~~~~p~~---~~l~~~~~~~~i~---hgG~~s-~~eal~~G---vP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~ 345 (401)
.++....+|+. .++..+++ ||. +=|+|- ..|++++| .|+|+--+.+- +..+. ..|+.+
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa----~~~l~--~~allV---- 420 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCGA----AEVLG--EYCRSV---- 420 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTT----HHHHG--GGSEEE----
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCCC----HHHhC--CCEEEE----
Confidence 46666677764 77788998 654 347874 58999996 66665544431 22221 147777
Q ss_pred CCCCCHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhhc-HHHHHHHHHHHH
Q 038300 346 CGRIQREEMARVIKEVVMEREGEKIKRKTREMGEKIKEKG-EEEIEWVADELI 397 (401)
Q Consensus 346 ~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~v~~~~ 397 (401)
...+.++++++|.++|+.+ .++-+++.+++.+.+++.. ..=+..+++.|.
T Consensus 421 -nP~D~~~lA~AI~~aL~m~-~~er~~r~~~~~~~V~~~d~~~W~~~fl~~L~ 471 (496)
T 3t5t_A 421 -NPFDLVEQAEAISAALAAG-PRQRAEAAARRRDAARPWTLEAWVQAQLDGLA 471 (496)
T ss_dssp -CTTBHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHh
Confidence 3358999999999999732 3455666777777776655 444555665553
No 57
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=73.92 E-value=4.1 Score=37.04 Aligned_cols=84 Identities=15% Similarity=0.273 Sum_probs=47.6
Q ss_pred CCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEccc--Cchh-hhcccCCcceEEecCC
Q 038300 226 FLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGW--APQM-KILGHPSIGGFVSHCG 302 (401)
Q Consensus 226 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~-~~l~~~~~~~~i~hgG 302 (401)
..+.+.+.++++.|.+.+.++++. +... + ..+-+.+.+......+.+.+- +.+. ++++++++ +|+.-.
T Consensus 200 ~wp~~~~~~l~~~l~~~g~~vvl~-g~~~-e-----~~~~~~i~~~~~~~~~~l~g~~sl~e~~ali~~a~~--~i~~Ds 270 (349)
T 3tov_A 200 RWPAERFAHVADYFGRLGYKTVFF-GGPM-D-----LEMVQPVVEQMETKPIVATGKFQLGPLAAAMNRCNL--LITNDS 270 (349)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEC-CCTT-T-----HHHHHHHHHTCSSCCEECTTCCCHHHHHHHHHTCSE--EEEESS
T ss_pred CCCHHHHHHHHHHHHhCCCeEEEE-eCcc-h-----HHHHHHHHHhcccccEEeeCCCCHHHHHHHHHhCCE--EEECCC
Confidence 344567778888886668888763 3211 0 111112222222222222222 2233 88999999 999722
Q ss_pred chhHHHHHHhCCcEEec
Q 038300 303 WSSVMESMRLGVPIIAM 319 (401)
Q Consensus 303 ~~s~~eal~~GvP~i~~ 319 (401)
|.+.=|.+.|+|+|++
T Consensus 271 -G~~HlAaa~g~P~v~l 286 (349)
T 3tov_A 271 -GPMHVGISQGVPIVAL 286 (349)
T ss_dssp -HHHHHHHTTTCCEEEE
T ss_pred -CHHHHHHhcCCCEEEE
Confidence 3444588899999997
No 58
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=73.85 E-value=19 Score=36.01 Aligned_cols=35 Identities=17% Similarity=0.077 Sum_probs=26.7
Q ss_pred hhcccCCcceEEecC---C-chhHHHHHHhCCcEEecCCcc
Q 038300 287 KILGHPSIGGFVSHC---G-WSSVMESMRLGVPIIAMPMHV 323 (401)
Q Consensus 287 ~~l~~~~~~~~i~hg---G-~~s~~eal~~GvP~i~~P~~~ 323 (401)
++++.+++ ||.-+ | -.+++||+++|+|+|+--..+
T Consensus 514 ~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG 552 (725)
T 3nb0_A 514 EFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVSG 552 (725)
T ss_dssp HHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTBH
T ss_pred HHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCCC
Confidence 57888888 66442 2 248999999999999976643
No 59
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=68.57 E-value=4.5 Score=30.60 Aligned_cols=39 Identities=18% Similarity=0.172 Sum_probs=26.6
Q ss_pred HHHHHHhhcCCCEEEEcCCCCc--HHHHHHh---cCCCeEEEec
Q 038300 69 SFFNILKNLSPDLLIYDLIQPW--APALASS---LNIPAVYFLV 107 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~~--~~~~A~~---lgIP~v~~~~ 107 (401)
.-.+.+++.+||+||.|..+|. |..+++. .++|+|.++.
T Consensus 44 eAl~~~~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lTa 87 (123)
T 2lpm_A 44 EALDIARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIFATG 87 (123)
T ss_dssp HHHHHHHHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBCT
T ss_pred HHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEec
Confidence 3445667789999999976664 5566643 4788776543
No 60
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=66.66 E-value=7.3 Score=35.01 Aligned_cols=84 Identities=13% Similarity=0.112 Sum_probs=48.0
Q ss_pred CCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhc---CCceE-EcccC--ch-hhhcccCCcceEE
Q 038300 226 FLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTK---ERAMV-IEGWA--PQ-MKILGHPSIGGFV 298 (401)
Q Consensus 226 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~--p~-~~~l~~~~~~~~i 298 (401)
..+.+.+.++++.|.+.+.++++. +... + ...-+.+.+... ..+++ +.+.. .+ .++++++++ +|
T Consensus 196 ~wp~~~~~~l~~~L~~~~~~vvl~-g~~~----e--~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~ali~~a~l--~I 266 (348)
T 1psw_A 196 RWPHYHYAELAKQLIDEGYQVVLF-GSAK----D--HEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKA--IV 266 (348)
T ss_dssp SCCHHHHHHHHHHHHHTTCEEEEC-CCGG----G--HHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHHHTSSE--EE
T ss_pred CCCHHHHHHHHHHHHHCCCeEEEE-eChh----h--HHHHHHHHHhhhhccccceEeccCcCCHHHHHHHHHhCCE--EE
Confidence 344577788888887668887764 3210 0 001111111110 01232 22222 23 389999999 99
Q ss_pred ecCCchhHHHHHHhCCcEEec
Q 038300 299 SHCGWSSVMESMRLGVPIIAM 319 (401)
Q Consensus 299 ~hgG~~s~~eal~~GvP~i~~ 319 (401)
+.- .|.+.-|.+.|+|+|++
T Consensus 267 ~~D-sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 267 TND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp EES-SHHHHHHHHTTCCEEEE
T ss_pred ecC-CHHHHHHHHcCCCEEEE
Confidence 973 34566688999999986
No 61
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=66.47 E-value=10 Score=29.03 Aligned_cols=40 Identities=18% Similarity=0.282 Sum_probs=28.3
Q ss_pred HHHHHhhcCCCEEEEcCCCCc--HHHHHHhc-------CCCeEEEeccc
Q 038300 70 FFNILKNLSPDLLIYDLIQPW--APALASSL-------NIPAVYFLVSS 109 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~~--~~~~A~~l-------gIP~v~~~~~~ 109 (401)
-.+.+++.+||+||.|..+|. |..+++++ .+|+|.++...
T Consensus 49 al~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 49 ALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred HHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 344556678999999977665 66666543 58988887654
No 62
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=65.38 E-value=13 Score=27.24 Aligned_cols=40 Identities=20% Similarity=0.471 Sum_probs=27.3
Q ss_pred HHHHHhhcCCCEEEEcCCCCc--HHHHHHhc-------CCCeEEEeccc
Q 038300 70 FFNILKNLSPDLLIYDLIQPW--APALASSL-------NIPAVYFLVSS 109 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~~--~~~~A~~l-------gIP~v~~~~~~ 109 (401)
..+.+++.+||+||.|...+. |..+.+++ ++|++.++...
T Consensus 38 al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 38 ALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 444556678999999966554 55555443 58888887654
No 63
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=64.57 E-value=19 Score=29.02 Aligned_cols=78 Identities=10% Similarity=0.120 Sum_probs=43.8
Q ss_pred eEEcccCchh-hhcccCCcceEEecCCchhHHHH---HHhCCcEEecCCccchhhHHHHHHhhCe-eeeeeccCCCCCCH
Q 038300 277 MVIEGWAPQM-KILGHPSIGGFVSHCGWSSVMES---MRLGVPIIAMPMHVDQPLNARLVEDVGI-GLEVRRNKCGRIQR 351 (401)
Q Consensus 277 ~~~~~~~p~~-~~l~~~~~~~~i~hgG~~s~~ea---l~~GvP~i~~P~~~dQ~~na~~~~~~g~-g~~l~~~~~~~~~~ 351 (401)
.++..+.+.. .++..-+-+.++--||.||+.|+ +.+++|++++|.+. .....+...-. .+.+ .-++
T Consensus 91 ~i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~~~~~i~~------~~~~ 161 (176)
T 2iz6_A 91 PIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSLDAGLVHV------AADV 161 (176)
T ss_dssp EEECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHHCTTTEEE------ESSH
T ss_pred eEEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChhhcCeEEE------cCCH
Confidence 3445566654 44433333345567888876655 66999999999843 22223332211 2222 1257
Q ss_pred HHHHHHHHHHhc
Q 038300 352 EEMARVIKEVVM 363 (401)
Q Consensus 352 ~~l~~~i~~~l~ 363 (401)
+++.+.+++.+.
T Consensus 162 ~e~~~~l~~~~~ 173 (176)
T 2iz6_A 162 AGAIAAVKQLLA 173 (176)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777777766553
No 64
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=63.57 E-value=2.9 Score=37.44 Aligned_cols=121 Identities=17% Similarity=0.178 Sum_probs=65.8
Q ss_pred hCCCHHHHHHHHHHHHhCCCceEEeecCCCCCCCcccccCchhHHHhhcCCceEEccc--Cchh-hhcccCCcceEEec-
Q 038300 225 YFLSKEEMEDIALGLELSGVNFIWVVRFPCGAKVKVDEELPESFLERTKERAMVIEGW--APQM-KILGHPSIGGFVSH- 300 (401)
Q Consensus 225 ~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~-~~l~~~~~~~~i~h- 300 (401)
-..+.+.+.++++.|.+.+++++...+... +..+.+.+.+. ..++.+.+- +.+. ++++++++ +|+.
T Consensus 192 k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~------e~~~~~~i~~~--~~~~~l~g~~sl~el~ali~~a~l--~I~~D 261 (326)
T 2gt1_A 192 KHWPEEHWRELIGLLADSGIRIKLPWGAPH------EEERAKRLAEG--FAYVEVLPKMSLEGVARVLAGAKF--VVSVD 261 (326)
T ss_dssp GSCCHHHHHHHHHHTTTTCCEEEECCSSHH------HHHHHHHHHTT--CTTEEECCCCCHHHHHHHHHTCSE--EEEES
T ss_pred ccCCHHHHHHHHHHHHHCCCcEEEecCCHH------HHHHHHHHHhh--CCcccccCCCCHHHHHHHHHhCCE--EEecC
Confidence 334567788888888766788766534210 00011111111 123333322 2333 89999999 9998
Q ss_pred CCchhHHHHHHhCCcEEec--CCccchhhHHHHHHhhCe-eeeeecc--CCCCCCHHHHHHHHHHHhc
Q 038300 301 CGWSSVMESMRLGVPIIAM--PMHVDQPLNARLVEDVGI-GLEVRRN--KCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 301 gG~~s~~eal~~GvP~i~~--P~~~dQ~~na~~~~~~g~-g~~l~~~--~~~~~~~~~l~~~i~~~l~ 363 (401)
.|. +.=|.+.|+|+|++ |... .+..=.|- ...+... --..++.|++.++++++++
T Consensus 262 SG~--~HlAaa~g~P~v~lfg~t~p------~~~~P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~ 321 (326)
T 2gt1_A 262 TGL--SHLTAALDRPNITVYGPTDP------GLIGGYGKNQMVCRAPGNELSQLTANAVKQFIEENAE 321 (326)
T ss_dssp SHH--HHHHHHTTCCEEEEESSSCH------HHHCCCSSSEEEEECGGGCGGGCCHHHHHHHHHHTTT
T ss_pred CcH--HHHHHHcCCCEEEEECCCCh------hhcCCCCCCceEecCCcccccCCCHHHHHHHHHHHHH
Confidence 544 44466799999998 3211 11000111 1112100 1246899999999999986
No 65
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=58.63 E-value=5.5 Score=32.54 Aligned_cols=49 Identities=16% Similarity=0.361 Sum_probs=32.5
Q ss_pred hhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcCcc----cHHHHHHHHHHHHHHHh
Q 038300 326 PLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVMERE----GEKIKRKTREMGEKIKE 383 (401)
Q Consensus 326 ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~----~~~~~~~a~~~~~~~~~ 383 (401)
.+.+..=++.|+|+.+ |+|+|.++|.++++... ...|+ +...+-..+++
T Consensus 102 id~~~Fe~~cGVGV~V--------T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~ 154 (187)
T 3tl4_X 102 STKMGMNENSGVGIEI--------TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKN 154 (187)
T ss_dssp CCHHHHHHTTTTTCCC--------CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHT
T ss_pred CCHHHHHHHCCCCeEe--------CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhc
Confidence 3344444556999877 89999999999996311 23455 55555555554
No 66
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=58.13 E-value=24 Score=30.27 Aligned_cols=89 Identities=15% Similarity=0.219 Sum_probs=47.3
Q ss_pred CCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhcCCCE
Q 038300 2 SNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNLSPDL 81 (401)
Q Consensus 2 rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~ 81 (401)
.| +|+++.+...++-+-.+......+++..+. .+.. .. ...- ..+...-.+..++...+||+
T Consensus 27 ~g-~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~----~~~~--~~-v~GT----------PaDCV~lal~~l~~~~~PDL 88 (251)
T 2phj_A 27 LG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKID----TDFY--TV-IDGT----------PADCVHLGYRVILEEKKPDL 88 (251)
T ss_dssp TS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEE----TTEE--EE-TTCC----------HHHHHHHHHHTTTTTCCCSE
T ss_pred cC-CEEEEecCCCccCCccceecCCCeEEEEec----CCCe--EE-ECCC----------HHHHHHHHHHHhcCCCCCCE
Confidence 35 899999888877665543333345555543 1100 00 0000 11112223444454458999
Q ss_pred EEEc----------CCCCcHH---HHHHhcCCCeEEEecc
Q 038300 82 LIYD----------LIQPWAP---ALASSLNIPAVYFLVS 108 (401)
Q Consensus 82 vI~D----------~~~~~~~---~~A~~lgIP~v~~~~~ 108 (401)
||+- .+..... .-|..+|||.|.++..
T Consensus 89 VvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (251)
T 2phj_A 89 VLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp EEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcC
Confidence 9973 3333333 3346779999999763
No 67
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=56.73 E-value=22 Score=26.56 Aligned_cols=40 Identities=20% Similarity=0.352 Sum_probs=26.8
Q ss_pred HHHHHhhcCCCEEEEcCCCCc--HHHHHHhc-------CCCeEEEeccc
Q 038300 70 FFNILKNLSPDLLIYDLIQPW--APALASSL-------NIPAVYFLVSS 109 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~~--~~~~A~~l-------gIP~v~~~~~~ 109 (401)
..+.+++.+||+||.|..++. |..+++.+ .+|.|+++...
T Consensus 40 al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 40 ALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp HHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred HHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 344556678999999976554 55555432 58888877653
No 68
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=55.41 E-value=17 Score=27.54 Aligned_cols=40 Identities=20% Similarity=0.262 Sum_probs=27.0
Q ss_pred HHHHHHhhcCCCEEEEcCCCCc--HHHHHHhc---------CCCeEEEecc
Q 038300 69 SFFNILKNLSPDLLIYDLIQPW--APALASSL---------NIPAVYFLVS 108 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~~--~~~~A~~l---------gIP~v~~~~~ 108 (401)
...+.+++.+||+||.|...+. |..+++.+ .+|.++++..
T Consensus 49 ~al~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 49 QVLDAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp HHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 4445566778999999966554 55665543 3788887664
No 69
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=51.29 E-value=11 Score=34.06 Aligned_cols=39 Identities=18% Similarity=0.104 Sum_probs=27.6
Q ss_pred hHHHHHHHhhcCCCEEEEc--CCC-CcHHHHHHhcCCCeEEE
Q 038300 67 SPSFFNILKNLSPDLLIYD--LIQ-PWAPALASSLNIPAVYF 105 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D--~~~-~~~~~~A~~lgIP~v~~ 105 (401)
...+.+++++.+||+|++- ... ..+..+|..+|||++.+
T Consensus 80 ~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~ 121 (376)
T 1v4v_A 80 LPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHV 121 (376)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCCEEEE
Confidence 3457788889999999973 222 22456788899998644
No 70
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=50.86 E-value=28 Score=25.13 Aligned_cols=41 Identities=17% Similarity=0.493 Sum_probs=27.1
Q ss_pred HHHHHHhhcCCCEEEEcCCCCc--HHHHHH----hcCCCeEEEeccc
Q 038300 69 SFFNILKNLSPDLLIYDLIQPW--APALAS----SLNIPAVYFLVSS 109 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~~--~~~~A~----~lgIP~v~~~~~~ 109 (401)
...+.+++.+||+||.|...+. |..+.+ ..++|.+.++...
T Consensus 37 ~al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 37 EAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp HHHHHHHTTCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS
T ss_pred HHHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 3445566778999999976554 444443 3368888876643
No 71
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=50.78 E-value=30 Score=25.69 Aligned_cols=40 Identities=18% Similarity=0.347 Sum_probs=26.3
Q ss_pred HHHHHHhhcCCCEEEEcCCCC--cHHHHHHhc-------CCCeEEEecc
Q 038300 69 SFFNILKNLSPDLLIYDLIQP--WAPALASSL-------NIPAVYFLVS 108 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~--~~~~~A~~l-------gIP~v~~~~~ 108 (401)
...+.+++.+||+||.|...+ .|..+.+.+ .+|.|.++..
T Consensus 38 ~al~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 38 ECLEALNATPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp HHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 344455667899999997655 355555433 5788887654
No 72
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=48.74 E-value=29 Score=25.66 Aligned_cols=41 Identities=20% Similarity=0.318 Sum_probs=27.4
Q ss_pred HHHHHHhhcCCCEEEEcCCCC---cHHHHHHh----cCCCeEEEeccc
Q 038300 69 SFFNILKNLSPDLLIYDLIQP---WAPALASS----LNIPAVYFLVSS 109 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~---~~~~~A~~----lgIP~v~~~~~~ 109 (401)
...+.+++.+||+||.|...+ .+..+.+. .++|+|.++...
T Consensus 45 ~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 45 EAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQ 92 (140)
T ss_dssp HHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCC
T ss_pred HHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 444555566899999996543 45555544 378998887654
No 73
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=48.44 E-value=42 Score=23.72 Aligned_cols=39 Identities=15% Similarity=0.188 Sum_probs=25.5
Q ss_pred HHHHHhhcCCCEEEEcCCCC--cHHHHHHhc-----CCCeEEEecc
Q 038300 70 FFNILKNLSPDLLIYDLIQP--WAPALASSL-----NIPAVYFLVS 108 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~--~~~~~A~~l-----gIP~v~~~~~ 108 (401)
..+.+++.+||+||.|...+ .|..+.+.+ ++|.+.++..
T Consensus 37 a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 37 ALKKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp HHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 34455667899999997654 355555433 5788877654
No 74
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=48.17 E-value=18 Score=34.31 Aligned_cols=35 Identities=20% Similarity=0.115 Sum_probs=29.4
Q ss_pred HHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEe
Q 038300 69 SFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~ 106 (401)
.+++.+++.+||++|... .+..+|+++|||++.+.
T Consensus 366 ~le~~i~~~~pDllig~~---~~~~~a~k~gip~~~~g 400 (458)
T 3pdi_B 366 DLEHAARAGQAQLVIGNS---HALASARRLGVPLLRAG 400 (458)
T ss_dssp HHHHHHHHHTCSEEEECT---THHHHHHHTTCCEEECS
T ss_pred HHHHHHHhcCCCEEEECh---hHHHHHHHcCCCEEEec
Confidence 477888889999999874 47899999999998753
No 75
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=47.81 E-value=27 Score=25.71 Aligned_cols=65 Identities=11% Similarity=0.031 Sum_probs=44.9
Q ss_pred cccCCcceEEecCCchh---------HHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHH
Q 038300 289 LGHPSIGGFVSHCGWSS---------VMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIK 359 (401)
Q Consensus 289 l~~~~~~~~i~hgG~~s---------~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~ 359 (401)
+..+++ +|--+|..| +-.|...|+|+|++=.++.+. .-..+++.+..+. .++.+.|.++|+
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~a~~iV-------~Wn~~~I~~aI~ 105 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAVSSEVV-------GWNPHCIRDALE 105 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHHCSEEE-------CSCHHHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhhCceec-------cCCHHHHHHHHH
Confidence 445666 888888877 566788999999998777652 1122444444432 378899999998
Q ss_pred HHhc
Q 038300 360 EVVM 363 (401)
Q Consensus 360 ~~l~ 363 (401)
..++
T Consensus 106 ~~~~ 109 (111)
T 1eiw_A 106 DALD 109 (111)
T ss_dssp HHHC
T ss_pred hccC
Confidence 8763
No 76
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=47.54 E-value=79 Score=23.78 Aligned_cols=47 Identities=13% Similarity=0.037 Sum_probs=32.5
Q ss_pred hCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhc
Q 038300 312 LGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 312 ~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
..+|+|++--..+ ........+.|+--.+. ..++.++|..+|+.++.
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~~g~~~~l~----kP~~~~~L~~~i~~~~~ 120 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQDGAYDFIA----KPFAADRLVQSARRAEE 120 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHHTTCCEEEE----SSCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHhcCCCeEEe----CCCCHHHHHHHHHHHHH
Confidence 4788888865444 33445555667655552 35789999999999997
No 77
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=47.24 E-value=32 Score=24.99 Aligned_cols=40 Identities=25% Similarity=0.408 Sum_probs=26.3
Q ss_pred HHHHHhhcCCCEEEEcCCCC--cHHHHHHhc-----CCCeEEEeccc
Q 038300 70 FFNILKNLSPDLLIYDLIQP--WAPALASSL-----NIPAVYFLVSS 109 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~--~~~~~A~~l-----gIP~v~~~~~~ 109 (401)
..+.+++.+||+||.|...+ .|..+.+.+ ++|.+.++...
T Consensus 39 ~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 39 FLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp HHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred HHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 34455667899999996554 355555433 58888876643
No 78
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=45.41 E-value=40 Score=24.14 Aligned_cols=41 Identities=24% Similarity=0.336 Sum_probs=26.7
Q ss_pred HHHHHHhhcCCCEEEEcCCCC--cHHHHHHhc----CCCeEEEeccc
Q 038300 69 SFFNILKNLSPDLLIYDLIQP--WAPALASSL----NIPAVYFLVSS 109 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~--~~~~~A~~l----gIP~v~~~~~~ 109 (401)
...+.+++.+||+||.|...+ .|..+++.+ .+|.|.++...
T Consensus 37 ~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 83 (122)
T 1zgz_A 37 GLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRS 83 (122)
T ss_dssp HHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSC
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCC
Confidence 344555667899999996554 355555443 57877776544
No 79
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=45.12 E-value=14 Score=33.45 Aligned_cols=41 Identities=17% Similarity=0.099 Sum_probs=28.8
Q ss_pred hHHHHHHHhhcCCCEEEEcC--C-CCcHHHHHHhcCCCeEEEec
Q 038300 67 SPSFFNILKNLSPDLLIYDL--I-QPWAPALASSLNIPAVYFLV 107 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~--~-~~~~~~~A~~lgIP~v~~~~ 107 (401)
...+.+++++.+||+|++-. . ...+..+|..+|+|+|.+..
T Consensus 75 ~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~ 118 (384)
T 1vgv_A 75 LEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEA 118 (384)
T ss_dssp HHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESC
T ss_pred HHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEec
Confidence 45678888999999999732 2 22344567888999876543
No 80
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=45.06 E-value=18 Score=31.14 Aligned_cols=53 Identities=15% Similarity=0.317 Sum_probs=39.8
Q ss_pred cCCcceEEecCCchhHHHHHHh---CCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcC
Q 038300 291 HPSIGGFVSHCGWSSVMESMRL---GVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVME 364 (401)
Q Consensus 291 ~~~~~~~i~hgG~~s~~eal~~---GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~ 364 (401)
.+++ +|+-||=||+.+++.. ++|+++++. +. .|... .+.++++.++++.++++
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~-G~------------~Gfl~------~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKA-GR------------LGFLT------SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEES-SS------------CCSSC------CBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEEC-CC------------CCccC------cCCHHHHHHHHHHHHcC
Confidence 4566 9999999999999876 889999874 21 23222 35688899999888863
No 81
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=45.04 E-value=34 Score=25.99 Aligned_cols=41 Identities=22% Similarity=0.236 Sum_probs=27.1
Q ss_pred HHHHHHhhcCCCEEEEcCCCC--cHHHHHHhc-----CCCeEEEeccc
Q 038300 69 SFFNILKNLSPDLLIYDLIQP--WAPALASSL-----NIPAVYFLVSS 109 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~--~~~~~A~~l-----gIP~v~~~~~~ 109 (401)
...+.+++..||+||.|...+ .|..+.+.+ ++|+|+++...
T Consensus 42 ~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (154)
T 2rjn_A 42 DALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA 89 (154)
T ss_dssp HHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG
T ss_pred HHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC
Confidence 444556667899999996554 355555433 68888887654
No 82
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=44.65 E-value=43 Score=23.75 Aligned_cols=39 Identities=21% Similarity=0.429 Sum_probs=25.7
Q ss_pred HHHHhhcCCCEEEEcCCCC--cHHHHHHh----cCCCeEEEeccc
Q 038300 71 FNILKNLSPDLLIYDLIQP--WAPALASS----LNIPAVYFLVSS 109 (401)
Q Consensus 71 ~~~l~~~~pD~vI~D~~~~--~~~~~A~~----lgIP~v~~~~~~ 109 (401)
.+.+++.+||+||.|...+ .|..+++. -.+|.+.++...
T Consensus 38 ~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 82 (120)
T 2a9o_A 38 LEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKD 82 (120)
T ss_dssp HHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCC
T ss_pred HHHHHhCCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 3444556899999996554 35555543 368888887654
No 83
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=44.15 E-value=46 Score=23.83 Aligned_cols=40 Identities=23% Similarity=0.340 Sum_probs=26.1
Q ss_pred HHHHHhhcCCCEEEEcCCCC--cHHHHHHh----cCCCeEEEeccc
Q 038300 70 FFNILKNLSPDLLIYDLIQP--WAPALASS----LNIPAVYFLVSS 109 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~--~~~~~A~~----lgIP~v~~~~~~ 109 (401)
..+.+++.+||+||.|...+ .|..+++. -++|.+.++...
T Consensus 39 a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 84 (123)
T 1xhf_A 39 MHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRD 84 (123)
T ss_dssp HHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCC
T ss_pred HHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECCC
Confidence 34455567899999997654 35555543 367888776643
No 84
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=44.02 E-value=38 Score=24.18 Aligned_cols=39 Identities=18% Similarity=0.266 Sum_probs=25.3
Q ss_pred HHHHhhcCCCEEEEcCCCCc--HHHHHHhc-----CCCeEEEeccc
Q 038300 71 FNILKNLSPDLLIYDLIQPW--APALASSL-----NIPAVYFLVSS 109 (401)
Q Consensus 71 ~~~l~~~~pD~vI~D~~~~~--~~~~A~~l-----gIP~v~~~~~~ 109 (401)
.+.+++.+||+||.|...+. |..+++.+ ++|.+.++...
T Consensus 40 ~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (120)
T 1tmy_A 40 VEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMG 85 (120)
T ss_dssp HHHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTT
T ss_pred HHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 34445568999999976553 45555433 58888876654
No 85
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=43.81 E-value=16 Score=31.34 Aligned_cols=88 Identities=17% Similarity=0.275 Sum_probs=47.4
Q ss_pred CCeEEEEEeCCccchhhhccccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCCchHHHHHHHhhchHHHHHHHhhcCCCE
Q 038300 2 SNFHICFCSTPSILNSIKQLDKFSLSIQLIELHLPSLPELPPQYHTTKGLPPHLMPTLKEAFDMASPSFFNILKNLSPDL 81 (401)
Q Consensus 2 rG~~Vt~~~~~~~~~~i~~~~~~~~gi~f~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~ 81 (401)
.| +|+++.+...++-+-.+.+....+++..+... .......- ..+...-.+..++.+.+||+
T Consensus 27 ~g-~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~~~-------~~~~v~GT----------PaDCV~lal~~~l~~~~PDL 88 (251)
T 2wqk_A 27 LG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTD-------FYTVIDGT----------PADCVHLGYRVILEEKKPDL 88 (251)
T ss_dssp TS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETT-------EEEETTCC----------HHHHHHHHHHTTTTTCCCSE
T ss_pred CC-CEEEEeeCCCCcccccCcCCCCCceeEEeecc-------ceeecCCC----------hHHHHhhhhhhhcCCCCCCE
Confidence 45 59999888877655554322234555544200 00000000 11112223455566678999
Q ss_pred EEE----------cCCCCcHHH---HHHhcCCCeEEEec
Q 038300 82 LIY----------DLIQPWAPA---LASSLNIPAVYFLV 107 (401)
Q Consensus 82 vI~----------D~~~~~~~~---~A~~lgIP~v~~~~ 107 (401)
||+ |.+.+.... -|..+|||.|.++.
T Consensus 89 VvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 89 VLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp EEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred EEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 998 444333333 34677999999985
No 86
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=42.91 E-value=48 Score=24.04 Aligned_cols=41 Identities=22% Similarity=0.163 Sum_probs=26.6
Q ss_pred HHHHHHhhc-CCCEEEEcCCCC---cHHHHHHhc-----CCCeEEEeccc
Q 038300 69 SFFNILKNL-SPDLLIYDLIQP---WAPALASSL-----NIPAVYFLVSS 109 (401)
Q Consensus 69 ~l~~~l~~~-~pD~vI~D~~~~---~~~~~A~~l-----gIP~v~~~~~~ 109 (401)
...+.+++. +||+||.|...+ .+..+.+.+ ++|+|.++...
T Consensus 40 ~a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 89 (132)
T 2rdm_A 40 KAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGHA 89 (132)
T ss_dssp HHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred HHHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCCc
Confidence 344555666 899999996554 355555433 58888886643
No 87
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=42.54 E-value=56 Score=23.16 Aligned_cols=41 Identities=22% Similarity=0.254 Sum_probs=26.4
Q ss_pred HHHHHHhhcCCCEEEEcCCCC--cHHHHHHh-----cCCCeEEEeccc
Q 038300 69 SFFNILKNLSPDLLIYDLIQP--WAPALASS-----LNIPAVYFLVSS 109 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~--~~~~~A~~-----lgIP~v~~~~~~ 109 (401)
...+.+++.+||++|.|...+ .|..+.+. -.+|++.++...
T Consensus 35 ~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 82 (121)
T 2pl1_A 35 EADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARE 82 (121)
T ss_dssp HHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCC
T ss_pred HHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCC
Confidence 344455667899999996654 34544433 258888876654
No 88
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=42.53 E-value=28 Score=32.67 Aligned_cols=34 Identities=12% Similarity=0.101 Sum_probs=21.6
Q ss_pred hhcCCCEEEEcC-C-CCcHHHHHHh--cCCCeEEEecc
Q 038300 75 KNLSPDLLIYDL-I-QPWAPALASS--LNIPAVYFLVS 108 (401)
Q Consensus 75 ~~~~pD~vI~D~-~-~~~~~~~A~~--lgIP~v~~~~~ 108 (401)
++.+||+|.+.. . ...+..++.. .|+|+|.....
T Consensus 127 ~~~~~DiIh~~~~~~~~~~~~~~~~~~~~~p~v~t~H~ 164 (485)
T 1rzu_A 127 PGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHN 164 (485)
T ss_dssp SSCCCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESC
T ss_pred cCCCCCEEEecccchhHHHHHHhhcccCCCCEEEEecC
Confidence 467899998653 2 1223344443 79999887664
No 89
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=42.51 E-value=39 Score=24.31 Aligned_cols=39 Identities=21% Similarity=0.388 Sum_probs=25.3
Q ss_pred HHHHhhcCCCEEEEcCCCC--cHHHHHHhc-----CCCeEEEeccc
Q 038300 71 FNILKNLSPDLLIYDLIQP--WAPALASSL-----NIPAVYFLVSS 109 (401)
Q Consensus 71 ~~~l~~~~pD~vI~D~~~~--~~~~~A~~l-----gIP~v~~~~~~ 109 (401)
.+.+++.+||+||.|...+ .|..+++.+ ++|.|.++...
T Consensus 40 ~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (124)
T 1srr_A 40 LDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYG 85 (124)
T ss_dssp HHHHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHHhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccC
Confidence 3444556899999996554 355555433 58888876653
No 90
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=41.99 E-value=49 Score=26.31 Aligned_cols=48 Identities=10% Similarity=0.133 Sum_probs=33.1
Q ss_pred HHHhhchHHHHHHHhhcCCCEEEEcCCCCc---------------HHHHHHhcCCCeEEEecc
Q 038300 61 EAFDMASPSFFNILKNLSPDLLIYDLIQPW---------------APALASSLNIPAVYFLVS 108 (401)
Q Consensus 61 ~~~~~~~~~l~~~l~~~~pD~vI~D~~~~~---------------~~~~A~~lgIP~v~~~~~ 108 (401)
.....+...+.+++++.+||.+..+-.+.. ...++...|+|+.-+.|.
T Consensus 46 ~RL~~I~~~l~~~i~~~~Pd~vaiE~~F~~~n~~sal~lgqarGv~~la~~~~glpv~eytP~ 108 (166)
T 4ep4_A 46 ERVGRIHARVLEVLHRFRPEAVAVEEQFFYRQNELAYKVGWALGAVLVAAFEAGVPVYAYGPM 108 (166)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEECCCCSSCSHHHHHHHHHHHHHHHHHHHHTCCEEEECHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeehhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHH
Confidence 344456778999999999999988833321 123446778888887664
No 91
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=41.70 E-value=46 Score=25.30 Aligned_cols=41 Identities=29% Similarity=0.403 Sum_probs=26.9
Q ss_pred HHHHHHhhcCCCEEEEcCCCCc--HHHHHHh-------cCCCeEEEeccc
Q 038300 69 SFFNILKNLSPDLLIYDLIQPW--APALASS-------LNIPAVYFLVSS 109 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~~--~~~~A~~-------lgIP~v~~~~~~ 109 (401)
...+.+++.+||+||.|...+. |..+++. -++|+|+++...
T Consensus 42 ~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 42 EAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILS 91 (154)
T ss_dssp HHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCC
T ss_pred HHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCC
Confidence 3445566778999999965443 5555532 368888877543
No 92
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=41.18 E-value=58 Score=23.65 Aligned_cols=40 Identities=28% Similarity=0.248 Sum_probs=25.6
Q ss_pred HHHHHHhhcCCCEEEEcCCCCc--HHHHHH---h----cCCCeEEEecc
Q 038300 69 SFFNILKNLSPDLLIYDLIQPW--APALAS---S----LNIPAVYFLVS 108 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~~--~~~~A~---~----lgIP~v~~~~~ 108 (401)
...+.+++.+||+||.|...+. |..+.+ + -++|+|.++..
T Consensus 38 ~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 86 (133)
T 3nhm_A 38 SGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGY 86 (133)
T ss_dssp HHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESC
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCC
Confidence 3444556678999999965443 444442 2 26888887654
No 93
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=41.04 E-value=40 Score=25.01 Aligned_cols=40 Identities=15% Similarity=0.162 Sum_probs=26.2
Q ss_pred HHHHHHhhcCCCEEEEcCCCCc--HHHHHHhc-----CCCeEEEeccc
Q 038300 69 SFFNILKNLSPDLLIYDLIQPW--APALASSL-----NIPAVYFLVSS 109 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~~--~~~~A~~l-----gIP~v~~~~~~ 109 (401)
...+.+++.+||+||.|. .+. +..+.+.+ ++|+|.++...
T Consensus 39 ~a~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (142)
T 2qxy_A 39 EAFTFLRREKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYV 85 (142)
T ss_dssp HHHHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCC
T ss_pred HHHHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCC
Confidence 344556667899999998 554 33334322 58888887654
No 94
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=40.78 E-value=23 Score=30.77 Aligned_cols=52 Identities=15% Similarity=0.298 Sum_probs=37.5
Q ss_pred CCcceEEecCCchhHHHHHHh------CCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhcC
Q 038300 292 PSIGGFVSHCGWSSVMESMRL------GVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVME 364 (401)
Q Consensus 292 ~~~~~~i~hgG~~s~~eal~~------GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~~ 364 (401)
+++ +|+=||=||+.+++.. ++|++++|... .|. + ..+.++++.++++.++.+
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G~-------------lgf-l-----~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHTGH-------------LGF-Y-----ADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEESSS-------------CCS-S-----CCBCGGGHHHHHHHHHTT
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCCC-------------CCc-C-----CcCCHHHHHHHHHHHHcC
Confidence 455 9999999999999865 89999998510 121 1 234577788888888763
No 95
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=40.45 E-value=35 Score=25.15 Aligned_cols=41 Identities=17% Similarity=0.353 Sum_probs=26.8
Q ss_pred HHHHHHhhcCCCEEEEcCCCC-------cHHHHHHhc-----CCCeEEEeccc
Q 038300 69 SFFNILKNLSPDLLIYDLIQP-------WAPALASSL-----NIPAVYFLVSS 109 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~-------~~~~~A~~l-----gIP~v~~~~~~ 109 (401)
...+.+++.+||+||.|...+ .+..+.+.+ ++|+|+++...
T Consensus 38 ~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 90 (140)
T 2qr3_A 38 SLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYA 90 (140)
T ss_dssp HHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGG
T ss_pred HHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCC
Confidence 344555667899999996544 455544332 68888887653
No 96
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=40.34 E-value=45 Score=24.20 Aligned_cols=41 Identities=22% Similarity=0.414 Sum_probs=25.3
Q ss_pred HHHHHHhhcCCCEEEEcCCCCc--HHHHHHh-----cCCCeEEEeccc
Q 038300 69 SFFNILKNLSPDLLIYDLIQPW--APALASS-----LNIPAVYFLVSS 109 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~~--~~~~A~~-----lgIP~v~~~~~~ 109 (401)
...+.+++.+||+||.|...+. |..+.+. -.+|.+.++...
T Consensus 42 ~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~ 89 (130)
T 3eod_A 42 DALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATE 89 (130)
T ss_dssp HHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCC
T ss_pred HHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCC
Confidence 4445566778999999976443 3444432 258888887654
No 97
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=39.82 E-value=39 Score=25.06 Aligned_cols=40 Identities=18% Similarity=0.221 Sum_probs=26.4
Q ss_pred HHHHHhhcCCCEEEEcCCCC--cHHHHHHhc----CCCeEEEeccc
Q 038300 70 FFNILKNLSPDLLIYDLIQP--WAPALASSL----NIPAVYFLVSS 109 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~--~~~~~A~~l----gIP~v~~~~~~ 109 (401)
..+.+++.+||+||.|...+ .|..+++.+ .+|.|.++...
T Consensus 40 al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~ 85 (136)
T 2qzj_A 40 AIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYIN 85 (136)
T ss_dssp HHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCC
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCC
Confidence 34455567899999996544 355555443 68888876643
No 98
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=39.55 E-value=61 Score=24.38 Aligned_cols=40 Identities=15% Similarity=0.375 Sum_probs=26.2
Q ss_pred HHHHHhhcCCCEEEEcCCCC--cHHHHHHhc-----CCCeEEEeccc
Q 038300 70 FFNILKNLSPDLLIYDLIQP--WAPALASSL-----NIPAVYFLVSS 109 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~--~~~~~A~~l-----gIP~v~~~~~~ 109 (401)
..+.+++..||+||.|...+ .|..+.+.+ ++|+|+++...
T Consensus 43 a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (153)
T 3cz5_A 43 AYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQ 89 (153)
T ss_dssp HHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred HHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCC
Confidence 34455667899999996544 355544332 68888887654
No 99
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=39.33 E-value=47 Score=24.60 Aligned_cols=40 Identities=15% Similarity=0.249 Sum_probs=25.4
Q ss_pred HHHHHhhcCCCEEEEcCCCC--cHHHHHHhc-----CCCeEEEeccc
Q 038300 70 FFNILKNLSPDLLIYDLIQP--WAPALASSL-----NIPAVYFLVSS 109 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~--~~~~~A~~l-----gIP~v~~~~~~ 109 (401)
..+.+++.+||+||.|...+ .|..+++.+ .+|.|.++...
T Consensus 40 a~~~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~~ 86 (137)
T 3cfy_A 40 AIQFIERSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAHG 86 (137)
T ss_dssp HHHHHHHHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESSC
T ss_pred HHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEecC
Confidence 33445556899999997654 355555433 57777776543
No 100
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=38.88 E-value=41 Score=24.08 Aligned_cols=37 Identities=27% Similarity=0.415 Sum_probs=22.8
Q ss_pred HHHhhcCCCEEEEcCCCC--cHHHHHHhc-------CCCeEEEecc
Q 038300 72 NILKNLSPDLLIYDLIQP--WAPALASSL-------NIPAVYFLVS 108 (401)
Q Consensus 72 ~~l~~~~pD~vI~D~~~~--~~~~~A~~l-------gIP~v~~~~~ 108 (401)
+.+++..||+||.|...+ .|..+++.+ .+|.+.++..
T Consensus 39 ~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 84 (124)
T 1mb3_A 39 SIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAF 84 (124)
T ss_dssp HHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC--
T ss_pred HHHhcCCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECC
Confidence 444556899999996654 355555432 5777777543
No 101
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=38.82 E-value=47 Score=24.76 Aligned_cols=38 Identities=16% Similarity=0.300 Sum_probs=24.3
Q ss_pred HHHHhhcCCCEEEEcCCCC--cHHHHHHhc-----CCCeEEEecc
Q 038300 71 FNILKNLSPDLLIYDLIQP--WAPALASSL-----NIPAVYFLVS 108 (401)
Q Consensus 71 ~~~l~~~~pD~vI~D~~~~--~~~~~A~~l-----gIP~v~~~~~ 108 (401)
.+.+++..||+||.|...+ .|..+++.+ ++|.|.++..
T Consensus 42 l~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~ 86 (141)
T 3cu5_A 42 IQIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGY 86 (141)
T ss_dssp HHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCS
T ss_pred HHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCC
Confidence 3445566899999996654 355555433 5777776543
No 102
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=38.33 E-value=47 Score=24.04 Aligned_cols=39 Identities=15% Similarity=0.175 Sum_probs=24.7
Q ss_pred HHHHHhhcCCCEEEEcCCCC--cHHHHHHhc-------CCCeEEEecc
Q 038300 70 FFNILKNLSPDLLIYDLIQP--WAPALASSL-------NIPAVYFLVS 108 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~--~~~~~A~~l-------gIP~v~~~~~ 108 (401)
..+.+++.+||+||.|...+ .|..+++.+ ++|.+.++..
T Consensus 43 a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 90 (129)
T 1p6q_A 43 GMKIMAQNPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQ 90 (129)
T ss_dssp HHHHHHTSCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSC
T ss_pred HHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCC
Confidence 44455667899999996554 355555433 4666666544
No 103
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=37.99 E-value=26 Score=35.27 Aligned_cols=95 Identities=8% Similarity=0.072 Sum_probs=63.1
Q ss_pred cccCchhhhcccCCcceEEecCCchhHHHHHHhCCcEEecCCccchhhHHHHHHhhCeeeeeecc--CCCCCCHHHHHHH
Q 038300 280 EGWAPQMKILGHPSIGGFVSHCGWSSVMESMRLGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRN--KCGRIQREEMARV 357 (401)
Q Consensus 280 ~~~~p~~~~l~~~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~--~~~~~~~~~l~~~ 357 (401)
.++.+-.++|..+|+ .||=.- +.+.|.+..++|+|......|++.+- ..|.=.-.... ..---+.++|.++
T Consensus 604 ~~~~di~~ll~~aD~--lITDyS-Sv~fD~~~l~kPiif~~~D~~~Y~~~----~rg~y~d~~~~~pg~~~~~~~eL~~~ 676 (729)
T 3l7i_A 604 SNYNDVSELFLISDC--LITDYS-SVMFDYGILKRPQFFFAYDIDKYDKG----LRGFYMNYMEDLPGPIYTEPYGLAKE 676 (729)
T ss_dssp TTCSCHHHHHHTCSE--EEESSC-THHHHHGGGCCCEEEECTTTTTTTSS----CCSBSSCTTSSSSSCEESSHHHHHHH
T ss_pred CCCcCHHHHHHHhCE--EEeech-HHHHhHHhhCCCEEEecCCHHHHhhc----cCCcccChhHhCCCCeECCHHHHHHH
Confidence 345555689999999 999874 67899999999999998877776541 12221111000 0112477889999
Q ss_pred HHHHhcCcccHHHHHHHHHHHHHHHh
Q 038300 358 IKEVVMEREGEKIKRKTREMGEKIKE 383 (401)
Q Consensus 358 i~~~l~~~~~~~~~~~a~~~~~~~~~ 383 (401)
|+..... +..|+++.+++.+.+-.
T Consensus 677 i~~~~~~--~~~~~~~~~~~~~~~~~ 700 (729)
T 3l7i_A 677 LKNLDKV--QQQYQEKIDAFYDRFCS 700 (729)
T ss_dssp HTTHHHH--HHHTHHHHHHHHHHHST
T ss_pred Hhhhhcc--chhHHHHHHHHHHHhCC
Confidence 9877642 45677877777777654
No 104
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=37.81 E-value=1.1e+02 Score=22.25 Aligned_cols=47 Identities=13% Similarity=0.090 Sum_probs=29.7
Q ss_pred hCCcEEecCCccchhhHHHHHHhhCe-eeeeeccCCCCCCHHHHHHHHHHHhc
Q 038300 312 LGVPIIAMPMHVDQPLNARLVEDVGI-GLEVRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 312 ~GvP~i~~P~~~dQ~~na~~~~~~g~-g~~l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
..+|+|++--..+.......+...|+ +... +.++.+++..+|+.++.
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~~ga~~~l~-----KP~~~~~L~~~i~~~~~ 118 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAINDAGIHQFLT-----KPWHPEQLLSSARNAAR 118 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHHTTCCEEEE-----SSCCHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHhhchhhhcc-----CCCCHHHHHHHHHHHHH
Confidence 45777776555444333333333455 4444 35789999999999886
No 105
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=36.93 E-value=49 Score=24.38 Aligned_cols=39 Identities=18% Similarity=0.110 Sum_probs=26.5
Q ss_pred HHHHHHHhh-cCCCEEEEcCCCC--cHHHHHHhc-----CCCeEEEe
Q 038300 68 PSFFNILKN-LSPDLLIYDLIQP--WAPALASSL-----NIPAVYFL 106 (401)
Q Consensus 68 ~~l~~~l~~-~~pD~vI~D~~~~--~~~~~A~~l-----gIP~v~~~ 106 (401)
....+.+++ ..||+||.|...+ .|..+.+.+ ++|+|.++
T Consensus 49 ~~al~~l~~~~~~dlvilD~~l~~~~g~~~~~~l~~~~~~~~ii~ls 95 (138)
T 2b4a_A 49 SAFFQHRSQLSTCDLLIVSDQLVDLSIFSLLDIVKEQTKQPSVLILT 95 (138)
T ss_dssp HHHHHTGGGGGSCSEEEEETTCTTSCHHHHHHHHTTSSSCCEEEEEE
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEE
Confidence 345556667 7899999996654 455555543 57887776
No 106
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=36.63 E-value=26 Score=33.37 Aligned_cols=36 Identities=14% Similarity=0.148 Sum_probs=29.4
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEE
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYF 105 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~ 105 (401)
...+++.+++.+||++|.. ..+..+|+++|||++-+
T Consensus 390 ~~el~~~i~~~~pDL~ig~---~~~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 390 ARVLLKTVDEYQADILIAG---GRNMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHHHHHTTCSEEECC---GGGHHHHHHTTCCBCCC
T ss_pred HHHHHHHHHhcCCCEEEEC---CchhHHHHHcCCCEEEe
Confidence 4467788888999999975 45778999999999754
No 107
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=36.59 E-value=27 Score=33.39 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=29.6
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEE
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYF 105 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~ 105 (401)
...+++.+++.+||++|.. ..+..+|+++|||++-+
T Consensus 406 ~~el~~~i~~~~pDL~ig~---~~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 406 GYEFEEFVKRIKPDLIGSG---IKEKFIFQKMGIPFREM 441 (492)
T ss_dssp HHHHHHHHHHHCCSEEEEC---HHHHHHHHHTTCCEEES
T ss_pred HHHHHHHHHhcCCcEEEeC---cchhHHHHHcCCCEEec
Confidence 4467788888899999986 45789999999999853
No 108
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=36.38 E-value=30 Score=29.14 Aligned_cols=29 Identities=17% Similarity=0.209 Sum_probs=24.0
Q ss_pred CCcceEEecCCchhHHHHHHhCCcEEecCCcc
Q 038300 292 PSIGGFVSHCGWSSVMESMRLGVPIIAMPMHV 323 (401)
Q Consensus 292 ~~~~~~i~hgG~~s~~eal~~GvP~i~~P~~~ 323 (401)
+++ |||+||........ ..+|+|-++..+
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 555 99999988888875 589999999853
No 109
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=36.35 E-value=68 Score=23.66 Aligned_cols=39 Identities=18% Similarity=0.270 Sum_probs=25.2
Q ss_pred HHHHHhh-cCCCEEEEcCCCC---cHHHHHHh----cCCCeEEEecc
Q 038300 70 FFNILKN-LSPDLLIYDLIQP---WAPALASS----LNIPAVYFLVS 108 (401)
Q Consensus 70 l~~~l~~-~~pD~vI~D~~~~---~~~~~A~~----lgIP~v~~~~~ 108 (401)
..+.+++ ..||+||.|...+ .|..+++. -++|+|+++..
T Consensus 41 a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~ 87 (140)
T 3h5i_A 41 AVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAH 87 (140)
T ss_dssp HHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESS
T ss_pred HHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECC
Confidence 3344444 6899999996553 45555543 36888877654
No 110
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=36.31 E-value=68 Score=23.05 Aligned_cols=40 Identities=18% Similarity=0.214 Sum_probs=25.5
Q ss_pred HHHHHhhcCCCEEEEcCCCC--cHHHHHHhc-------CCCeEEEeccc
Q 038300 70 FFNILKNLSPDLLIYDLIQP--WAPALASSL-------NIPAVYFLVSS 109 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~--~~~~~A~~l-------gIP~v~~~~~~ 109 (401)
..+.+++.+||+||.|...+ .|..+.+.+ .+|.+.++...
T Consensus 41 a~~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~~ 89 (128)
T 1jbe_A 41 ALNKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAEA 89 (128)
T ss_dssp HHHHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESSC
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecCc
Confidence 33455566899999997655 355555433 46777776543
No 111
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=36.13 E-value=71 Score=23.51 Aligned_cols=29 Identities=21% Similarity=0.219 Sum_probs=18.8
Q ss_pred HHHHHHhhcCCCEEEEcCCCC--cHHHHHHh
Q 038300 69 SFFNILKNLSPDLLIYDLIQP--WAPALASS 97 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~--~~~~~A~~ 97 (401)
...+.+++.+||+||.|...+ .|..+++.
T Consensus 45 ~al~~l~~~~~dlvllD~~lp~~~g~~~~~~ 75 (140)
T 3c97_A 45 QALQAYQNRQFDVIIMDIQMPVMDGLEAVSE 75 (140)
T ss_dssp HHHHHHHHSCCSEEEECTTCCSSCHHHHHHH
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCcHHHHHHH
Confidence 344455667899999997654 35555543
No 112
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=36.10 E-value=61 Score=26.41 Aligned_cols=40 Identities=23% Similarity=0.256 Sum_probs=26.7
Q ss_pred HHHHHhhcCCCEEEEcCCCC--cHHHHHHhc-----CCCeEEEeccc
Q 038300 70 FFNILKNLSPDLLIYDLIQP--WAPALASSL-----NIPAVYFLVSS 109 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~--~~~~~A~~l-----gIP~v~~~~~~ 109 (401)
..+.+++.+||+||.|...+ .|..+++.+ ++|+|+++...
T Consensus 38 a~~~~~~~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~ 84 (225)
T 1kgs_A 38 GMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALS 84 (225)
T ss_dssp HHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSC
T ss_pred HHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 33455667899999997655 355555332 68888887654
No 113
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=36.09 E-value=55 Score=18.10 Aligned_cols=29 Identities=3% Similarity=0.237 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhcCcccHHHHHHHHHHHHHHH
Q 038300 352 EEMARVIKEVVMEREGEKIKRKTREMGEKIK 382 (401)
Q Consensus 352 ~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~ 382 (401)
.++...+.++|.. +..+...+.++++.+.
T Consensus 4 nQLE~kVEeLl~~--n~~Le~eV~rLk~ll~ 32 (34)
T 2oxj_A 4 XQLEXKVXELLXK--NXHLEXEVXRLKXLVX 32 (34)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHh--hhhHHHHHHHHHHHHh
Confidence 4677888888864 6788888888887653
No 114
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=35.94 E-value=26 Score=30.59 Aligned_cols=40 Identities=10% Similarity=0.291 Sum_probs=27.1
Q ss_pred HHHHHHhhcCCCEEEEcCCCC---cHHHHHHh----cCCCeEEEecc
Q 038300 69 SFFNILKNLSPDLLIYDLIQP---WAPALASS----LNIPAVYFLVS 108 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~---~~~~~A~~----lgIP~v~~~~~ 108 (401)
...+.+++.+||+||+|..+| .|..+++. .++|+|.++..
T Consensus 196 eAl~~~~~~~~dlvl~D~~MPd~mdG~e~~~~ir~~~~~piI~lT~~ 242 (286)
T 3n0r_A 196 EALEAVTRRTPGLVLADIQLADGSSGIDAVKDILGRMDVPVIFITAF 242 (286)
T ss_dssp HHHHHHHHCCCSEEEEESCCTTSCCTTTTTHHHHHHTTCCEEEEESC
T ss_pred HHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHhcCCCCEEEEeCC
Confidence 344555667899999998777 24433322 27999988764
No 115
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=35.73 E-value=1.5e+02 Score=25.86 Aligned_cols=56 Identities=23% Similarity=0.220 Sum_probs=33.1
Q ss_pred HHHHHhCCcEEecCCccch----------------hhHHHHHHhhCe-eeeeecc---------CCCCCCHHHHHHHHHH
Q 038300 307 MESMRLGVPIIAMPMHVDQ----------------PLNARLVEDVGI-GLEVRRN---------KCGRIQREEMARVIKE 360 (401)
Q Consensus 307 ~eal~~GvP~i~~P~~~dQ----------------~~na~~~~~~g~-g~~l~~~---------~~~~~~~~~l~~~i~~ 360 (401)
+....+|+|++.-|-+.=| ..-|+..+..|+ |+.+++- ....++++++++.+++
T Consensus 189 lk~~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H~~pd~al~D~~~sl~p~el~~lv~~ 268 (285)
T 3sz8_A 189 MAETTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAHPDPDRARCDGPSALPLHQLEGLLSQ 268 (285)
T ss_dssp HHHHTTSCCEEEETTTTCC---------------HHHHHHHHHHHCCSEEEEEEESCGGGCSCSSCCCEEGGGHHHHHHH
T ss_pred HHHhCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEeccChhccCCchhhccCHHHHHHHHHH
Confidence 3344448999997876522 345566667788 5666432 1234666777666655
Q ss_pred Hh
Q 038300 361 VV 362 (401)
Q Consensus 361 ~l 362 (401)
+.
T Consensus 269 i~ 270 (285)
T 3sz8_A 269 MK 270 (285)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 116
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=35.48 E-value=18 Score=36.97 Aligned_cols=39 Identities=23% Similarity=0.231 Sum_probs=25.4
Q ss_pred HHHHHhh--cCCCEEEEcCC--CCcHHHHHHhcCCCeEEEecc
Q 038300 70 FFNILKN--LSPDLLIYDLI--QPWAPALASSLNIPAVYFLVS 108 (401)
Q Consensus 70 l~~~l~~--~~pD~vI~D~~--~~~~~~~A~~lgIP~v~~~~~ 108 (401)
+..+++. .+||+|.+... ...+..+++.+|+|.|.+...
T Consensus 397 l~~il~~~~~~PDVIHsH~~~sglva~llar~~gvP~V~T~Hs 439 (816)
T 3s28_A 397 AVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHA 439 (816)
T ss_dssp HHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSC
T ss_pred HHHHHHhcCCCCeEEEeCCchHHHHHHHHHHHcCCCEEEEEec
Confidence 3444443 37999987532 123456788999999887654
No 117
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=35.03 E-value=46 Score=25.21 Aligned_cols=40 Identities=18% Similarity=0.179 Sum_probs=25.9
Q ss_pred HHHHHhhcCCCEEEEcCCCC--cHHHHHHhc-----CCCeEEEeccc
Q 038300 70 FFNILKNLSPDLLIYDLIQP--WAPALASSL-----NIPAVYFLVSS 109 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~--~~~~~A~~l-----gIP~v~~~~~~ 109 (401)
..+.+++..||+||.|...+ .|..+.+.+ ++|+|+++...
T Consensus 39 a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (155)
T 1qkk_A 39 ALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHG 85 (155)
T ss_dssp HHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGG
T ss_pred HHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCC
Confidence 33444556799999996544 355554332 68998887654
No 118
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=34.93 E-value=63 Score=26.48 Aligned_cols=39 Identities=15% Similarity=0.325 Sum_probs=25.9
Q ss_pred HHHHHhhcCCCEEEEcCCCC--cHHHHHHhc-----CCCeEEEecc
Q 038300 70 FFNILKNLSPDLLIYDLIQP--WAPALASSL-----NIPAVYFLVS 108 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~--~~~~~A~~l-----gIP~v~~~~~ 108 (401)
..+.+++..||+||.|...+ .|..+++.+ ++|+|+++..
T Consensus 43 a~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~ 88 (233)
T 1ys7_A 43 ALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSAR 88 (233)
T ss_dssp HHHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECC
T ss_pred HHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEcC
Confidence 34455667899999997655 355555332 6888887653
No 119
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=34.77 E-value=66 Score=22.41 Aligned_cols=40 Identities=23% Similarity=0.263 Sum_probs=25.0
Q ss_pred HHHHHhhcCCCEEEEcCCCC--cHHHHHHh-------cCCCeEEEeccc
Q 038300 70 FFNILKNLSPDLLIYDLIQP--WAPALASS-------LNIPAVYFLVSS 109 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~--~~~~~A~~-------lgIP~v~~~~~~ 109 (401)
..+.+++.+||+||.|...+ .+..+.+. -++|+|.++...
T Consensus 37 ~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~~ 85 (119)
T 2j48_A 37 ALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGEP 85 (119)
T ss_dssp HHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESSC
T ss_pred HHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCCC
Confidence 34445556899999996544 34444432 368888877643
No 120
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=34.71 E-value=60 Score=17.94 Aligned_cols=29 Identities=7% Similarity=0.264 Sum_probs=21.3
Q ss_pred HHHHHHHHHHhcCcccHHHHHHHHHHHHHHH
Q 038300 352 EEMARVIKEVVMEREGEKIKRKTREMGEKIK 382 (401)
Q Consensus 352 ~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~ 382 (401)
.++..+|++++.. +..+...+.++++.+.
T Consensus 4 nQLEdkVEeLl~~--~~~Le~eV~RL~~ll~ 32 (34)
T 2hy6_A 4 KQLADAVEELASA--NYHLANAVARLAKAVG 32 (34)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHh--hHHHHHHHHHHHHHhc
Confidence 4678888888863 5677777888877654
No 121
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=34.33 E-value=87 Score=22.84 Aligned_cols=33 Identities=12% Similarity=0.144 Sum_probs=21.8
Q ss_pred cCCCEEEEcCCCCc--HHHHHHhc------CCCeEEEeccc
Q 038300 77 LSPDLLIYDLIQPW--APALASSL------NIPAVYFLVSS 109 (401)
Q Consensus 77 ~~pD~vI~D~~~~~--~~~~A~~l------gIP~v~~~~~~ 109 (401)
.+||+||.|..++. |..+++.+ .+|.|.++...
T Consensus 51 ~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~~ 91 (133)
T 2r25_B 51 ENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAFA 91 (133)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEECCC
Confidence 57999999976653 55554322 47877776643
No 122
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=34.09 E-value=63 Score=25.40 Aligned_cols=45 Identities=11% Similarity=0.254 Sum_probs=31.8
Q ss_pred hhchHHHHHHHhhcCCCEEEEc-CCCCc------------H--HHHHHhcCCCeEEEecc
Q 038300 64 DMASPSFFNILKNLSPDLLIYD-LIQPW------------A--PALASSLNIPAVYFLVS 108 (401)
Q Consensus 64 ~~~~~~l~~~l~~~~pD~vI~D-~~~~~------------~--~~~A~~lgIP~v~~~~~ 108 (401)
..+...+.+++++.+||.+..+ .|+.- | ..++...|||+..+.|.
T Consensus 45 ~~i~~~l~~~i~~~~Pd~vaiE~vf~~~n~~s~~~lgqarGv~~~a~~~~~ipv~eytp~ 104 (158)
T 1hjr_A 45 KLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAAR 104 (158)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEECCCCCCTTTHHHHHHHHHHHHHHHHTTTCCEEEEEHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeecccccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHH
Confidence 4456778999999999998888 44322 2 23456778888887664
No 123
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=33.49 E-value=45 Score=26.88 Aligned_cols=38 Identities=21% Similarity=0.318 Sum_probs=25.3
Q ss_pred HHHHhhcCCCEEEEcCCCC--cHHHHHHhc-----CCCeEEEecc
Q 038300 71 FNILKNLSPDLLIYDLIQP--WAPALASSL-----NIPAVYFLVS 108 (401)
Q Consensus 71 ~~~l~~~~pD~vI~D~~~~--~~~~~A~~l-----gIP~v~~~~~ 108 (401)
.+.+++.+||+||.|...+ .|..+++.+ ++|+|+++..
T Consensus 41 l~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~ 85 (208)
T 1yio_A 41 LEHRRPEQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAH 85 (208)
T ss_dssp HHHCCTTSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESC
T ss_pred HHhhhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCC
Confidence 3444566899999997655 355555433 5888887654
No 124
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=33.33 E-value=38 Score=28.70 Aligned_cols=37 Identities=11% Similarity=0.081 Sum_probs=24.4
Q ss_pred HHHHHHhhcCCCEEEEcCCCCc--HHHHHHhcCCCeEEEe
Q 038300 69 SFFNILKNLSPDLLIYDLIQPW--APALASSLNIPAVYFL 106 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~~--~~~~A~~lgIP~v~~~ 106 (401)
.++. +-+++||+||....... ...--++.|||++.+.
T Consensus 51 n~E~-i~~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 51 NAEG-ILAMKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp CHHH-HHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CHHH-HHccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 3444 44689999998755322 2334467899999874
No 125
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=33.20 E-value=77 Score=23.34 Aligned_cols=30 Identities=20% Similarity=0.298 Sum_probs=20.1
Q ss_pred HHHHHHhhcCCCEEEEcCCCC--cHHHHHHhc
Q 038300 69 SFFNILKNLSPDLLIYDLIQP--WAPALASSL 98 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~--~~~~~A~~l 98 (401)
...+.+++..||+||.|...+ .|..+++.+
T Consensus 46 ~al~~l~~~~~dlvi~d~~l~~~~g~~~~~~l 77 (143)
T 2qv0_A 46 DVLKFLQHNKVDAIFLDINIPSLDGVLLAQNI 77 (143)
T ss_dssp HHHHHHHHCCCSEEEECSSCSSSCHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEecCCCCCCHHHHHHHH
Confidence 344556667899999996554 456666544
No 126
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=33.14 E-value=40 Score=31.75 Aligned_cols=37 Identities=32% Similarity=0.321 Sum_probs=30.0
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEe
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~ 106 (401)
...+++.+++.+||++|.+. .+..+|+++|||++.+.
T Consensus 374 ~~~l~~~i~~~~pDl~ig~~---~~~~~a~k~gip~~~~~ 410 (458)
T 1mio_B 374 FFDVHQWIKNEGVDLLISNT---YGKFIAREENIPFVRFG 410 (458)
T ss_dssp HHHHHHHHHHSCCSEEEESG---GGHHHHHHHTCCEEECS
T ss_pred HHHHHHHHHhcCCCEEEeCc---chHHHHHHcCCCEEEee
Confidence 33577788888999999885 46889999999998763
No 127
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=32.80 E-value=29 Score=30.96 Aligned_cols=35 Identities=20% Similarity=0.150 Sum_probs=22.5
Q ss_pred HHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEec
Q 038300 73 ILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFLV 107 (401)
Q Consensus 73 ~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~ 107 (401)
.|-.++||+||......-...-.++.|||++.+..
T Consensus 111 ~i~al~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 111 ACVAATPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp HHHHTCCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred HHHhcCCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 34457999999764322122333677999998854
No 128
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=32.45 E-value=43 Score=26.48 Aligned_cols=41 Identities=5% Similarity=-0.043 Sum_probs=27.2
Q ss_pred HHHHHHhhcCCCEEEEcCCCCc--HHHHHHh-----cCCCeEEEeccc
Q 038300 69 SFFNILKNLSPDLLIYDLIQPW--APALASS-----LNIPAVYFLVSS 109 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~~--~~~~A~~-----lgIP~v~~~~~~ 109 (401)
...+.+++.+||+||.|..++. |..+++. -++|+|+++...
T Consensus 42 ~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~ 89 (184)
T 3rqi_A 42 EALKLAGAEKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYA 89 (184)
T ss_dssp HHHHHHTTSCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHHHHhhCCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 3445566778999999965553 5555543 258888877654
No 129
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=32.26 E-value=71 Score=27.01 Aligned_cols=43 Identities=21% Similarity=0.321 Sum_probs=30.1
Q ss_pred hHHHHHHHhhc--CCCEEEEcCCCC-------cHHHHHHhcCCCeEEEeccc
Q 038300 67 SPSFFNILKNL--SPDLLIYDLIQP-------WAPALASSLNIPAVYFLVSS 109 (401)
Q Consensus 67 ~~~l~~~l~~~--~pD~vI~D~~~~-------~~~~~A~~lgIP~v~~~~~~ 109 (401)
.+.+.+.++++ +||+|++|-... -+..+.-.+|+|.|...=+.
T Consensus 94 ~P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAKs~ 145 (237)
T 3goc_A 94 IPTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVAKNP 145 (237)
T ss_dssp HHHHHHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEESSC
T ss_pred HHHHHHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEeeeccc
Confidence 46667777765 699999994422 24456677899999986553
No 130
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=31.75 E-value=62 Score=27.92 Aligned_cols=42 Identities=19% Similarity=0.288 Sum_probs=31.6
Q ss_pred hHHHHHHHhhcCCCEEEEcCCC------CcHHHHHHhcCCCeEEEecc
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQ------PWAPALASSLNIPAVYFLVS 108 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~------~~~~~~A~~lgIP~v~~~~~ 108 (401)
...|.+++++.+||+|++-.-. ..+..+|..||+|.++..+.
T Consensus 101 a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 101 GRILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp HHHHHHHHHHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 3446666777789999977433 26789999999999988653
No 131
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=31.72 E-value=60 Score=26.28 Aligned_cols=38 Identities=32% Similarity=0.428 Sum_probs=24.9
Q ss_pred HHHHhhcCCCEEEEcCCCC--cHHHHHHhc-----CCCeEEEecc
Q 038300 71 FNILKNLSPDLLIYDLIQP--WAPALASSL-----NIPAVYFLVS 108 (401)
Q Consensus 71 ~~~l~~~~pD~vI~D~~~~--~~~~~A~~l-----gIP~v~~~~~ 108 (401)
.+.+++.+||+||.|..++ .|..+++.+ .+|.++++..
T Consensus 44 l~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~ls~~ 88 (215)
T 1a04_A 44 IELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVS 88 (215)
T ss_dssp HHHHHHHCCSEEEEETTSTTSCHHHHHHHHHHSCCCSEEEEEECC
T ss_pred HHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEECC
Confidence 3445556899999997655 355555433 5777777654
No 132
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=30.82 E-value=57 Score=24.04 Aligned_cols=40 Identities=25% Similarity=0.409 Sum_probs=23.3
Q ss_pred HHHHHHhhcCCCEEEEcCCCCc--HHHHHHh-------cCCCeEEEecc
Q 038300 69 SFFNILKNLSPDLLIYDLIQPW--APALASS-------LNIPAVYFLVS 108 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~~--~~~~A~~-------lgIP~v~~~~~ 108 (401)
...+.+++.+||+||.|...+. |..+++. -++|+|+++..
T Consensus 37 ~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 85 (140)
T 3n53_A 37 EALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSS 85 (140)
T ss_dssp HHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecC
Confidence 3444556668999999975443 2233322 46888877654
No 133
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=30.33 E-value=94 Score=22.21 Aligned_cols=40 Identities=18% Similarity=0.045 Sum_probs=25.4
Q ss_pred HHHHHHhhcCCCEEEEcCCCC--cHHHHHHh-------cCCCeEEEecc
Q 038300 69 SFFNILKNLSPDLLIYDLIQP--WAPALASS-------LNIPAVYFLVS 108 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~--~~~~~A~~-------lgIP~v~~~~~ 108 (401)
...+.+++.+||+||.|...+ .|..+++. .++|+|.++..
T Consensus 38 ~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 86 (127)
T 3i42_A 38 DALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGF 86 (127)
T ss_dssp HHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECC
Confidence 444556677899999996543 35555432 34777777654
No 134
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=30.32 E-value=79 Score=26.52 Aligned_cols=43 Identities=23% Similarity=0.393 Sum_probs=30.0
Q ss_pred hHHHHHHHhhc--CCCEEEEcCCCCc-------HHHHHHhcCCCeEEEeccc
Q 038300 67 SPSFFNILKNL--SPDLLIYDLIQPW-------APALASSLNIPAVYFLVSS 109 (401)
Q Consensus 67 ~~~l~~~l~~~--~pD~vI~D~~~~~-------~~~~A~~lgIP~v~~~~~~ 109 (401)
.+.+.+.++++ +||+|++|-.... +..+.-.+|+|.|.+.=..
T Consensus 90 ~P~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~~ 141 (225)
T 2w36_A 90 GPLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKSR 141 (225)
T ss_dssp HHHHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESSC
T ss_pred hHHHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEecc
Confidence 55677777776 6999999954333 3345566799999987653
No 135
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=30.17 E-value=1.1e+02 Score=22.56 Aligned_cols=33 Identities=27% Similarity=0.378 Sum_probs=22.5
Q ss_pred cCCCEEEEcCCCC--cHHHHHHh-------cCCCeEEEeccc
Q 038300 77 LSPDLLIYDLIQP--WAPALASS-------LNIPAVYFLVSS 109 (401)
Q Consensus 77 ~~pD~vI~D~~~~--~~~~~A~~-------lgIP~v~~~~~~ 109 (401)
..||+||.|...+ .|..+.+. -++|+|+++...
T Consensus 61 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~t~~~ 102 (149)
T 1k66_A 61 PRPAVILLDLNLPGTDGREVLQEIKQDEVLKKIPVVIMTTSS 102 (149)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHTTSTTGGGSCEEEEESCC
T ss_pred CCCcEEEEECCCCCCCHHHHHHHHHhCcccCCCeEEEEeCCC
Confidence 6899999996654 35555543 357888876654
No 136
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=30.17 E-value=67 Score=23.30 Aligned_cols=36 Identities=19% Similarity=0.255 Sum_probs=22.8
Q ss_pred HHhhcCCCEEEEcCCCCc--HHHHHHhc-----CCCeEEEecc
Q 038300 73 ILKNLSPDLLIYDLIQPW--APALASSL-----NIPAVYFLVS 108 (401)
Q Consensus 73 ~l~~~~pD~vI~D~~~~~--~~~~A~~l-----gIP~v~~~~~ 108 (401)
.+++.+||+||.|...+. |..+.+.+ ++|+|.++..
T Consensus 41 ~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 83 (134)
T 3f6c_A 41 RVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAK 83 (134)
T ss_dssp HHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC
T ss_pred HHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCC
Confidence 344568999999965443 55555432 5777776654
No 137
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=30.07 E-value=72 Score=28.70 Aligned_cols=29 Identities=17% Similarity=0.385 Sum_probs=22.2
Q ss_pred cCCcceEEec-CCchhHHHHHHhCCcEEecCC
Q 038300 291 HPSIGGFVSH-CGWSSVMESMRLGVPIIAMPM 321 (401)
Q Consensus 291 ~~~~~~~i~h-gG~~s~~eal~~GvP~i~~P~ 321 (401)
.||+ +|++ .++.+...+-..|+|.+.+-.
T Consensus 114 ~PD~--Vv~~~~~~~~~~aa~~~giP~v~~~~ 143 (391)
T 3tsa_A 114 RPSV--LLVDVCALIGRVLGGLLDLPVVLHRW 143 (391)
T ss_dssp CCSE--EEEETTCHHHHHHHHHTTCCEEEECC
T ss_pred CCCE--EEeCcchhHHHHHHHHhCCCEEEEec
Confidence 5787 7776 666677778889999998754
No 138
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=29.96 E-value=46 Score=28.13 Aligned_cols=37 Identities=19% Similarity=-0.020 Sum_probs=23.4
Q ss_pred HHHHHHhhcCCCEEEEcCCCCc--HHHHHHhcCCCeEEEe
Q 038300 69 SFFNILKNLSPDLLIYDLIQPW--APALASSLNIPAVYFL 106 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~~--~~~~A~~lgIP~v~~~ 106 (401)
.++.+ -+++||+||....... ...--++.|||++.+.
T Consensus 51 n~E~i-~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 51 SSEGI-LSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp CHHHH-HTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CHHHH-HccCCCEEEEcCCCCCHHHHHHHHHcCCcEEEec
Confidence 34444 4579999998643221 2233467899998874
No 139
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=29.58 E-value=76 Score=26.53 Aligned_cols=42 Identities=19% Similarity=0.370 Sum_probs=28.1
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCc--HHHHHHhc-----CCCeEEEeccc
Q 038300 68 PSFFNILKNLSPDLLIYDLIQPW--APALASSL-----NIPAVYFLVSS 109 (401)
Q Consensus 68 ~~l~~~l~~~~pD~vI~D~~~~~--~~~~A~~l-----gIP~v~~~~~~ 109 (401)
....+.+++.+||+||.|..++. |..+++.+ ++|+|+++...
T Consensus 57 ~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~ 105 (250)
T 3r0j_A 57 AQALDRARETRPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARD 105 (250)
T ss_dssp HHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECST
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 34455566678999999966554 55555432 58888877654
No 140
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=29.47 E-value=1.1e+02 Score=22.47 Aligned_cols=42 Identities=14% Similarity=0.284 Sum_probs=26.6
Q ss_pred HHHHHHHhh------cCCCEEEEcCCCC--cHHHHHHh-------cCCCeEEEeccc
Q 038300 68 PSFFNILKN------LSPDLLIYDLIQP--WAPALASS-------LNIPAVYFLVSS 109 (401)
Q Consensus 68 ~~l~~~l~~------~~pD~vI~D~~~~--~~~~~A~~-------lgIP~v~~~~~~ 109 (401)
....+.+++ ..||+||.|...+ .|..+.+. -++|+|+++...
T Consensus 43 ~~a~~~l~~~~~~~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~ 99 (143)
T 2qvg_A 43 NQALDMLYGRNKENKIHPKLILLDINIPKMNGIEFLKELRDDSSFTDIEVFVLTAAY 99 (143)
T ss_dssp HHHHHHHHTCTTCCCCCCSEEEEETTCTTSCHHHHHHHHTTSGGGTTCEEEEEESCC
T ss_pred HHHHHHHHhcccccCCCCCEEEEecCCCCCCHHHHHHHHHcCccccCCcEEEEeCCC
Confidence 344455555 6799999996544 45555543 357788776643
No 141
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=29.28 E-value=49 Score=29.53 Aligned_cols=39 Identities=18% Similarity=0.140 Sum_probs=27.2
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCC---cHHHHHHhcCCCeEEE
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQP---WAPALASSLNIPAVYF 105 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~---~~~~~A~~lgIP~v~~ 105 (401)
...+.+++++.+||+|++..... .+..++...|+|+|.+
T Consensus 84 ~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~ 125 (375)
T 3beo_A 84 LEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQIPVGHV 125 (375)
T ss_dssp HHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEE
Confidence 44577888889999999853211 1235678889999854
No 142
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=28.89 E-value=80 Score=22.78 Aligned_cols=38 Identities=21% Similarity=0.405 Sum_probs=22.8
Q ss_pred HHHHhhcCCCEEEEcCCCC--cHHHHHHhc------CCCeEEEecc
Q 038300 71 FNILKNLSPDLLIYDLIQP--WAPALASSL------NIPAVYFLVS 108 (401)
Q Consensus 71 ~~~l~~~~pD~vI~D~~~~--~~~~~A~~l------gIP~v~~~~~ 108 (401)
.+.+++.+||+||.|...+ .|..+.+.+ .+|.+.++..
T Consensus 41 ~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~~ii~ls~~ 86 (130)
T 1dz3_A 41 LQMLEEKRPDILLLDIIMPHLDGLAVLERIRAGFEHQPNVIMLTAF 86 (130)
T ss_dssp HHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHHCSSCCEEEEEEET
T ss_pred HHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCcEEEEecC
Confidence 3444556899999997655 355444322 3566666543
No 143
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=28.80 E-value=35 Score=32.73 Aligned_cols=35 Identities=14% Similarity=0.197 Sum_probs=28.9
Q ss_pred HHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEe
Q 038300 69 SFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~ 106 (401)
.+++.+++.+||++|.+ .....+|+++|||++.+.
T Consensus 363 el~~~i~~~~pDl~ig~---~~~r~~a~k~gip~~~i~ 397 (511)
T 2xdq_B 363 VVGDAIARVEPAAIFGT---QMERHVGKRLNIPCGVIA 397 (511)
T ss_dssp HHHHHHHHHCCSEEEEC---HHHHHHHHHHTCCEEECS
T ss_pred HHHHHHHhcCCCEEEec---cchHHHHHhcCCCeEecc
Confidence 67788888899999976 457789999999998754
No 144
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=28.73 E-value=76 Score=25.92 Aligned_cols=41 Identities=12% Similarity=0.332 Sum_probs=27.0
Q ss_pred HHHHHhhcCCCEEEEcCCCC--cHHHHHHh----cCCCeEEEeccch
Q 038300 70 FFNILKNLSPDLLIYDLIQP--WAPALASS----LNIPAVYFLVSSA 110 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~--~~~~~A~~----lgIP~v~~~~~~~ 110 (401)
..+.+++.+||+||.|...+ .|..+++. -++|+|+++....
T Consensus 40 al~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~ii~lt~~~~ 86 (230)
T 2oqr_A 40 ALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDS 86 (230)
T ss_dssp HHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHHCSCSEEEEECCHH
T ss_pred HHHHHhccCCCEEEEECCCCCCCHHHHHHHHHcCCCCCEEEEeCCCc
Confidence 33445566899999997655 35555543 3689888876543
No 145
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=28.71 E-value=1.3e+02 Score=20.40 Aligned_cols=49 Identities=20% Similarity=0.280 Sum_probs=32.7
Q ss_pred HhCCcEEecCCccchhh-HHHHHH--hhCeeeeeeccCCCCCCHHHHHHHHHHHhc
Q 038300 311 RLGVPIIAMPMHVDQPL-NARLVE--DVGIGLEVRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 311 ~~GvP~i~~P~~~dQ~~-na~~~~--~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
-.|+|++++--...|.+ |--.-+ ..|+...+- ...++|++...+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakkegvsydvl----kstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVL----KSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEE----ECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCcchhhh----ccCCHHHHHHHHHHHHH
Confidence 36888888877777765 333323 347766552 34579999999988873
No 146
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=28.52 E-value=52 Score=31.65 Aligned_cols=37 Identities=11% Similarity=0.174 Sum_probs=29.1
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhc-------CCCeEEEe
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQPWAPALASSL-------NIPAVYFL 106 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~l-------gIP~v~~~ 106 (401)
...+++.+++.+||+||... .+..+|+++ |||++.+.
T Consensus 427 ~~~l~~~i~~~~pDLlig~s---~~k~~a~~~~~~~~~~giP~irig 470 (523)
T 3u7q_B 427 LWHLRSLVFTDKPDFMIGNS---YGKFIQRDTLHKGKEFEVPLIRIG 470 (523)
T ss_dssp HHHHHHHHHHTCCSEEEECT---THHHHHHHHHHHCGGGCCCEEECS
T ss_pred HHHHHHHHHhcCCCEEEECc---cHHHHHHHhhcccccCCCceEEec
Confidence 44677888888999999874 466788877 99998753
No 147
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=28.43 E-value=76 Score=27.17 Aligned_cols=41 Identities=15% Similarity=0.109 Sum_probs=30.8
Q ss_pred HHHHHHHhhcCCCEEEEcCCC------CcHHHHHHhcCCCeEEEecc
Q 038300 68 PSFFNILKNLSPDLLIYDLIQ------PWAPALASSLNIPAVYFLVS 108 (401)
Q Consensus 68 ~~l~~~l~~~~pD~vI~D~~~------~~~~~~A~~lgIP~v~~~~~ 108 (401)
..|.+++++..||+|++-.-. -.+..+|..||+|.++..+.
T Consensus 106 ~~La~~i~~~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~ 152 (255)
T 1efv_B 106 RVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQ 152 (255)
T ss_dssp HHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEE
Confidence 345566666789999977433 36789999999999988653
No 148
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=28.41 E-value=66 Score=26.62 Aligned_cols=37 Identities=27% Similarity=0.546 Sum_probs=24.7
Q ss_pred HHHhhcCCCEEEEcCCCC--cHHHHHHhc----CCCeEEEecc
Q 038300 72 NILKNLSPDLLIYDLIQP--WAPALASSL----NIPAVYFLVS 108 (401)
Q Consensus 72 ~~l~~~~pD~vI~D~~~~--~~~~~A~~l----gIP~v~~~~~ 108 (401)
+.+++.+||+||.|...+ .|..+++.+ ++|+|+++..
T Consensus 43 ~~l~~~~~dlvilD~~l~~~~g~~~~~~lr~~~~~~ii~lt~~ 85 (238)
T 2gwr_A 43 TAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAK 85 (238)
T ss_dssp HHHHHHCCSEEEEESSCSSSCHHHHHHHHHTTCCCCEEEEEET
T ss_pred HHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEeCC
Confidence 344556899999997655 355555433 6888887654
No 149
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=28.34 E-value=39 Score=32.57 Aligned_cols=35 Identities=14% Similarity=0.292 Sum_probs=28.7
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEE
Q 038300 68 PSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYF 105 (401)
Q Consensus 68 ~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~ 105 (401)
..+++.+++.+||++|.+. .+..+|+++|||++.+
T Consensus 339 ~el~~~i~~~~pDL~ig~~---~~~~~a~~~giP~~~i 373 (525)
T 3aek_B 339 LEVEKAIEAAAPELILGTQ---MERNIAKKLGLPCAVI 373 (525)
T ss_dssp HHHHHHHHHHCCSEEEECH---HHHHHHHHHTCCEEEC
T ss_pred HHHHHHHhhcCCCEEEecc---hhHHHHHHcCCCEEEe
Confidence 4577778888999999773 5778999999999874
No 150
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=28.03 E-value=43 Score=30.08 Aligned_cols=38 Identities=18% Similarity=0.399 Sum_probs=23.9
Q ss_pred HHHHHHhhcCCCEEEEcCCCCc-HHHHHHhcCCCeEEEec
Q 038300 69 SFFNILKNLSPDLLIYDLIQPW-APALASSLNIPAVYFLV 107 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~~-~~~~A~~lgIP~v~~~~ 107 (401)
.++.++ +++||+||....... ...+.+.+|||++.+..
T Consensus 88 n~E~Il-al~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 88 DLESLI-TLQPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp CHHHHH-HHCCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred CHHHHh-cCCCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 344444 479999997653211 12345778999998743
No 151
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=27.78 E-value=74 Score=23.38 Aligned_cols=40 Identities=15% Similarity=0.232 Sum_probs=24.8
Q ss_pred HHHHHHHhhcCCCEEEEcCCCC--cHHHHHHhc-------CCCeEEEec
Q 038300 68 PSFFNILKNLSPDLLIYDLIQP--WAPALASSL-------NIPAVYFLV 107 (401)
Q Consensus 68 ~~l~~~l~~~~pD~vI~D~~~~--~~~~~A~~l-------gIP~v~~~~ 107 (401)
....+.+++..||+||.|...+ .+..+.+.+ .+|+|.++.
T Consensus 41 ~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~ 89 (142)
T 3cg4_A 41 GQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTA 89 (142)
T ss_dssp HHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEEC
Confidence 3455566677899999996544 344444322 466776654
No 152
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=27.04 E-value=97 Score=25.94 Aligned_cols=41 Identities=17% Similarity=0.235 Sum_probs=27.4
Q ss_pred HHHHHHhhcCCCEEEEcCCCCc--HHHHHHh----cCCCeEEEeccc
Q 038300 69 SFFNILKNLSPDLLIYDLIQPW--APALASS----LNIPAVYFLVSS 109 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~~--~~~~A~~----lgIP~v~~~~~~ 109 (401)
...+.+++..||+||.|..++. |..+++. -++|+|+++...
T Consensus 72 ~al~~~~~~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~~ 118 (249)
T 3q9s_A 72 NGLIKAREDHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARD 118 (249)
T ss_dssp HHHHHHHHSCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESCC
T ss_pred HHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECCC
Confidence 4445566678999999977664 3444443 358888877654
No 153
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=26.86 E-value=76 Score=27.11 Aligned_cols=41 Identities=15% Similarity=0.117 Sum_probs=30.6
Q ss_pred HHHHHHHhhcCCCEEEEcCCC------CcHHHHHHhcCCCeEEEecc
Q 038300 68 PSFFNILKNLSPDLLIYDLIQ------PWAPALASSLNIPAVYFLVS 108 (401)
Q Consensus 68 ~~l~~~l~~~~pD~vI~D~~~------~~~~~~A~~lgIP~v~~~~~ 108 (401)
..|.+++++..||+|++-.-. -.+..+|.+||+|.++..+.
T Consensus 103 ~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 149 (252)
T 1efp_B 103 KILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASK 149 (252)
T ss_dssp HHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEEE
Confidence 345556666789999977433 36789999999999988653
No 154
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=26.54 E-value=39 Score=28.70 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=23.3
Q ss_pred HHHHHHhhcCCCEEEEcCCCC-cHHHHHHhcCCCeEEEec
Q 038300 69 SFFNILKNLSPDLLIYDLIQP-WAPALASSLNIPAVYFLV 107 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~-~~~~~A~~lgIP~v~~~~ 107 (401)
.++. +-+++||+||...... ......+++|||++.+..
T Consensus 52 n~E~-i~~l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 52 NVEA-VKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp CHHH-HHHTCCSEEEEEGGGHHHHHHHHHHHTSCCEEECC
T ss_pred CHHH-HHhcCCCEEEecCccCHHHHHHHHHcCCcEEEecC
Confidence 3444 4457999999754211 112344677999988754
No 155
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=26.52 E-value=70 Score=26.78 Aligned_cols=38 Identities=24% Similarity=0.172 Sum_probs=23.1
Q ss_pred HHHHHHhhcCCCEEEEcCCCCc--HHHHHHhcCCCeEEEec
Q 038300 69 SFFNILKNLSPDLLIYDLIQPW--APALASSLNIPAVYFLV 107 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~~--~~~~A~~lgIP~v~~~~ 107 (401)
.++.++ +++||+||....... ...--++.|||++.+..
T Consensus 49 n~E~i~-~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~ 88 (245)
T 1n2z_A 49 NLERIV-ALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDA 88 (245)
T ss_dssp CHHHHH-HTCCSEEEECTTTSCHHHHHHHHHHTCCEEECCC
T ss_pred CHHHHh-ccCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCC
Confidence 344444 579999998532111 22334677999987653
No 156
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=26.32 E-value=55 Score=18.01 Aligned_cols=28 Identities=4% Similarity=0.222 Sum_probs=20.6
Q ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHHH
Q 038300 353 EMARVIKEVVMEREGEKIKRKTREMGEKIK 382 (401)
Q Consensus 353 ~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~ 382 (401)
++...+.+++.. +..+..-+.++++.+.
T Consensus 4 QLE~kVEeLl~~--n~~Le~EV~RLk~Ll~ 31 (33)
T 3m48_A 4 QLEAKVEELLSK--NWNLENEVARLKKLVG 31 (33)
T ss_dssp HHHHHHHHHHHH--HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH--hHHHHHHHHHHHHHhh
Confidence 567788888863 6778888888877653
No 157
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=26.31 E-value=70 Score=17.71 Aligned_cols=29 Identities=10% Similarity=0.308 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhcCcccHHHHHHHHHHHHHHH
Q 038300 352 EEMARVIKEVVMEREGEKIKRKTREMGEKIK 382 (401)
Q Consensus 352 ~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~ 382 (401)
.++...+.++|.. +..+..-+.++++.+.
T Consensus 4 nQLEdKvEeLl~~--~~~L~~EV~RLk~lL~ 32 (34)
T 2bni_A 4 KQIEDKLEEILSK--GHHICNELARIKKLLG 32 (34)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHHHHc--cHHHHHHHHHHHHHhc
Confidence 4677888888863 6777777888777653
No 158
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=26.28 E-value=87 Score=17.17 Aligned_cols=29 Identities=3% Similarity=0.096 Sum_probs=21.2
Q ss_pred HHHHHHHHHHhcCcccHHHHHHHHHHHHHHH
Q 038300 352 EEMARVIKEVVMEREGEKIKRKTREMGEKIK 382 (401)
Q Consensus 352 ~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~ 382 (401)
.++...++++|.. +..+..-+.++++.+.
T Consensus 3 nQLEdKvEeLl~~--~~~Le~EV~RLk~lL~ 31 (33)
T 3c3g_A 3 KXIEXKLXEIXSK--XYHXENXLARIKXLLX 31 (33)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHH--hhHHHHHHHHHHHHHc
Confidence 4677888888863 6677777888877653
No 159
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=25.98 E-value=60 Score=28.64 Aligned_cols=39 Identities=26% Similarity=0.354 Sum_probs=24.7
Q ss_pred HHHHHHhhcCCCEEEEcCCCCc-HHHHHHhcCCCeEEEecc
Q 038300 69 SFFNILKNLSPDLLIYDLIQPW-APALASSLNIPAVYFLVS 108 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~~-~~~~A~~lgIP~v~~~~~ 108 (401)
.++.++ +++||+||....... ...--+++|||++.+...
T Consensus 76 n~E~i~-~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~~ 115 (326)
T 3psh_A 76 NIESLL-ALKPDVVFVTNYAPSEMIKQISDVNIPVVAISLR 115 (326)
T ss_dssp CHHHHH-HTCCSEEEEETTCCHHHHHHHHTTTCCEEEECSC
T ss_pred CHHHHH-ccCCCEEEEeCCCChHHHHHHHHcCCCEEEEecc
Confidence 344444 579999997644221 223346779999988643
No 160
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=25.63 E-value=91 Score=22.07 Aligned_cols=46 Identities=9% Similarity=0.081 Sum_probs=32.5
Q ss_pred hCCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhc
Q 038300 312 LGVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 312 ~GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
..+|+|++ ..+.........+.|+--.+. ..++.+++.++|+.++.
T Consensus 79 ~~~~ii~~--~~~~~~~~~~~~~~g~~~~l~----kp~~~~~l~~~i~~~~~ 124 (127)
T 2gkg_A 79 KNVPIVII--GNPDGFAQHRKLKAHADEYVA----KPVDADQLVERAGALIG 124 (127)
T ss_dssp TTSCEEEE--ECGGGHHHHHHSTTCCSEEEE----SSCCHHHHHHHHHHHHC
T ss_pred cCCCEEEE--ecCCchhHHHHHHhCcchhee----CCCCHHHHHHHHHHHHc
Confidence 47899998 444445555666677755552 35789999999998875
No 161
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=25.25 E-value=64 Score=27.80 Aligned_cols=36 Identities=14% Similarity=-0.003 Sum_probs=23.1
Q ss_pred HHHHHHhhcCCCEEEEcCCCC--cHHHHHHhcCCCeEEE
Q 038300 69 SFFNILKNLSPDLLIYDLIQP--WAPALASSLNIPAVYF 105 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~--~~~~~A~~lgIP~v~~ 105 (401)
.++. |-+++||+||...... ......++.|||++.+
T Consensus 51 n~E~-i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~ 88 (283)
T 2r79_A 51 AAEG-VLALRPDILIGTEEMGPPPVLKQLEGAGVRVETL 88 (283)
T ss_dssp CHHH-HHTTCCSEEEECTTCCCHHHHHHHHHTTCCEEEC
T ss_pred CHHH-HHhcCCCEEEEeCccCcHHHHHHHHHcCCcEEEe
Confidence 3444 4458999999864322 1223446789998876
No 162
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=24.79 E-value=1e+02 Score=17.31 Aligned_cols=30 Identities=17% Similarity=0.208 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhcCcccHHHHHHHHHHHHHHHh
Q 038300 352 EEMARVIKEVVMEREGEKIKRKTREMGEKIKE 383 (401)
Q Consensus 352 ~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~ 383 (401)
.++...|++++.. +..+...+.++++.+..
T Consensus 4 nQLE~KVEeLl~~--~~~Le~eV~RLk~ll~~ 33 (36)
T 1kd8_B 4 KQLKAKVEELKSK--LWHLKNKVARLKKKNAE 33 (36)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH--hHHHHHHHHHHHHHhcc
Confidence 4678888888863 56778888888877643
No 163
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=24.64 E-value=2e+02 Score=23.78 Aligned_cols=44 Identities=5% Similarity=-0.032 Sum_probs=28.7
Q ss_pred eEEcccCchh--hhcccCCcceEEecCCchhHHHHH---------HhCCcEEecCC
Q 038300 277 MVIEGWAPQM--KILGHPSIGGFVSHCGWSSVMESM---------RLGVPIIAMPM 321 (401)
Q Consensus 277 ~~~~~~~p~~--~~l~~~~~~~~i~hgG~~s~~eal---------~~GvP~i~~P~ 321 (401)
..+...++.. .+...++. .++--||.||+-|.. .+++|++++-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 4444555543 33344553 456678999988876 47999999864
No 164
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=24.50 E-value=48 Score=28.89 Aligned_cols=30 Identities=13% Similarity=0.222 Sum_probs=24.9
Q ss_pred ccCCcceEEecCCchhHHHHHHh----CCcEEecCC
Q 038300 290 GHPSIGGFVSHCGWSSVMESMRL----GVPIIAMPM 321 (401)
Q Consensus 290 ~~~~~~~~i~hgG~~s~~eal~~----GvP~i~~P~ 321 (401)
..+++ +|+-||=||+.+++.. ++|+++++.
T Consensus 62 ~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 62 QQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 44666 9999999999999843 789999984
No 165
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=24.34 E-value=42 Score=29.67 Aligned_cols=55 Identities=16% Similarity=0.349 Sum_probs=36.4
Q ss_pred hcccCCcceEEecCCchhHHHHHHh----CCcEEecCCccchhhHHHHHHhhCeeeeeeccCCCCCCHHHHHHHHHHHhc
Q 038300 288 ILGHPSIGGFVSHCGWSSVMESMRL----GVPIIAMPMHVDQPLNARLVEDVGIGLEVRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 288 ~l~~~~~~~~i~hgG~~s~~eal~~----GvP~i~~P~~~dQ~~na~~~~~~g~g~~l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
....+++ +|+-||=||+.+++.. ++|+++++... .|. + ..+.++++.++++.++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~G~-------------~gf-l-----~~~~~~~~~~~~~~i~~ 130 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNLGR-------------IGF-L-----AEAEAEAIDAVLEHVVA 130 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEECSS-------------CCS-S-----CSEEGGGHHHHHHHHHH
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeCCC-------------Ccc-C-----cccCHHHHHHHHHHHHc
Confidence 3445677 9999999999999854 89999998421 222 1 12356777777777775
No 166
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=24.30 E-value=46 Score=23.96 Aligned_cols=38 Identities=24% Similarity=0.377 Sum_probs=23.9
Q ss_pred HHHhhcCCCEEEEcCCCC--cHHHHHHh-------cCCCeEEEeccc
Q 038300 72 NILKNLSPDLLIYDLIQP--WAPALASS-------LNIPAVYFLVSS 109 (401)
Q Consensus 72 ~~l~~~~pD~vI~D~~~~--~~~~~A~~-------lgIP~v~~~~~~ 109 (401)
+.+++.+||+||.|...+ .|..+.+. -++|.+.++...
T Consensus 40 ~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 86 (127)
T 2jba_A 40 NQLNEPWPDLILLAWMLPGGSGIQFIKHLRRESMTRDIPVVMLTARG 86 (127)
T ss_dssp TTCSSSCCSEEEEESEETTEEHHHHHHHHHTSTTTTTSCEEEEEETT
T ss_pred HHHhccCCCEEEEecCCCCCCHHHHHHHHHhCcccCCCCEEEEeCCC
Confidence 334455799999996544 35554433 257888776543
No 167
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=24.21 E-value=49 Score=31.89 Aligned_cols=35 Identities=11% Similarity=0.125 Sum_probs=28.6
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEE
Q 038300 68 PSFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYF 105 (401)
Q Consensus 68 ~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~ 105 (401)
..+++.+++.+||++|.. ..+..+|+++|||++-+
T Consensus 446 ~el~~~i~~~~pDl~ig~---~~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 446 HDMEVVLEKLKPDMFFAG---IKEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHHHHHCCSEEEEC---HHHHHHHHHTTCEEEET
T ss_pred HHHHHHHHhcCCCEEEcc---cchhHHHHhcCCCEEEe
Confidence 357888888999999966 34678999999999854
No 168
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=23.99 E-value=61 Score=26.44 Aligned_cols=38 Identities=5% Similarity=-0.023 Sum_probs=28.7
Q ss_pred HHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEeccch
Q 038300 70 FFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFLVSSA 110 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~ 110 (401)
..+.+++...++||-|.. ...+|+++|+|.+.+.+..-
T Consensus 134 ~i~~l~~~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~e 171 (196)
T 2q5c_A 134 LISKVKTENIKIVVSGKT---VTDEAIKQGLYGETINSGEE 171 (196)
T ss_dssp HHHHHHHTTCCEEEECHH---HHHHHHHTTCEEEECCCCHH
T ss_pred HHHHHHHCCCeEEECCHH---HHHHHHHcCCcEEEEecCHH
Confidence 333444558999998854 57999999999999887543
No 169
>3bre_A Probable two-component response regulator; protein-nucleotide complex, signaling protein; HET: C2E; 2.40A {Pseudomonas aeruginosa} PDB: 3i5a_A*
Probab=23.79 E-value=94 Score=27.58 Aligned_cols=40 Identities=18% Similarity=0.412 Sum_probs=26.7
Q ss_pred HHHHHhhcCCCEEEEcCCCC--cHHHHHHhc-------CCCeEEEeccc
Q 038300 70 FFNILKNLSPDLLIYDLIQP--WAPALASSL-------NIPAVYFLVSS 109 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~--~~~~~A~~l-------gIP~v~~~~~~ 109 (401)
..+.+++.+||+||+|..++ .|..+++.+ .+|+|+++...
T Consensus 55 al~~~~~~~~dlvl~D~~mp~~~G~~~~~~l~~~~~~~~~~ii~~s~~~ 103 (358)
T 3bre_A 55 AVAVANQIKPTVILQDLVMPGVDGLTLLAAYRGNPATRDIPIIVLSTKE 103 (358)
T ss_dssp HHHHHHHHCCSEEEEESBCSSSBHHHHHHHHTTSTTTTTSCEEEEESSC
T ss_pred HHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHhcCcccCCCcEEEEeCCC
Confidence 33445566899999997655 456655443 47888877654
No 170
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=23.20 E-value=93 Score=26.43 Aligned_cols=42 Identities=24% Similarity=0.270 Sum_probs=28.5
Q ss_pred hHHHHHHHhhc--CCCEEEEcCCCC-------cHHHHHHhcCCCeEEEecc
Q 038300 67 SPSFFNILKNL--SPDLLIYDLIQP-------WAPALASSLNIPAVYFLVS 108 (401)
Q Consensus 67 ~~~l~~~l~~~--~pD~vI~D~~~~-------~~~~~A~~lgIP~v~~~~~ 108 (401)
.+.+.+.++++ +||+|++|-... -+..+.-.+|+|.|...=+
T Consensus 96 ~P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAKs 146 (246)
T 3ga2_A 96 LPLIIEAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKT 146 (246)
T ss_dssp HHHHHHHHHHCSSCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred HHHHHHHHHhcCCCCCEEEEcCcEEecCCCcchhheeeeecCCCEEeeecc
Confidence 45566666665 699999994322 2445556778999998654
No 171
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=22.80 E-value=96 Score=26.11 Aligned_cols=41 Identities=20% Similarity=0.310 Sum_probs=27.1
Q ss_pred HHHHHHhhcCCCEEEEcCCCC--cHHHHHHh-----cCCCeEEEeccc
Q 038300 69 SFFNILKNLSPDLLIYDLIQP--WAPALASS-----LNIPAVYFLVSS 109 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~--~~~~~A~~-----lgIP~v~~~~~~ 109 (401)
...+.+++..||+||.|..++ .|..+++. -.+|+|.++...
T Consensus 164 eal~~l~~~~~dlvl~D~~mp~~~G~~l~~~ir~~~~~~piI~lt~~~ 211 (254)
T 2ayx_A 164 DALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANA 211 (254)
T ss_dssp HHHHHHHHSCCSEEEEEESSCSSCCHHHHHHHHHHHCCSCEEEEESST
T ss_pred HHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence 445556667899999996554 35555533 268988887643
No 172
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=22.58 E-value=1.1e+02 Score=16.91 Aligned_cols=29 Identities=0% Similarity=0.063 Sum_probs=21.0
Q ss_pred HHHHHHHHHHhcCcccHHHHHHHHHHHHHHH
Q 038300 352 EEMARVIKEVVMEREGEKIKRKTREMGEKIK 382 (401)
Q Consensus 352 ~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~ 382 (401)
.++...++++|.. +..+..-+.++++.+.
T Consensus 4 nQLEdKVEeLl~~--~~~Le~EV~RLk~ll~ 32 (34)
T 3c3f_A 4 XQIEXKLEXILSX--LYHXENEXARIXKLLX 32 (34)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhh--hhHHHHHHHHHHHHHh
Confidence 4677888888863 5677777888877653
No 173
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=22.46 E-value=2.4e+02 Score=20.81 Aligned_cols=46 Identities=11% Similarity=0.055 Sum_probs=30.4
Q ss_pred hCCcEEecCCccchhhHHHHHHhhC-e-eeeeeccCCCCCCHHHHHHHHHHHhc
Q 038300 312 LGVPIIAMPMHVDQPLNARLVEDVG-I-GLEVRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 312 ~GvP~i~~P~~~dQ~~na~~~~~~g-~-g~~l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
..+|+|++--..+.. ......+.| + +... ..++.++|.++|+.++.
T Consensus 75 ~~~~ii~~s~~~~~~-~~~~~~~~g~~~~~l~-----KP~~~~~L~~~i~~~l~ 122 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLT-TAMEAVNEGQVFRFLN-----KPCQMSDIKAAINAGIK 122 (151)
T ss_dssp SSCEEEEEECGGGHH-HHHHHHHHTCCSEEEE-----SSCCHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHH-HHHHHHHcCCeeEEEc-----CCCCHHHHHHHHHHHHH
Confidence 467777765544433 334444556 5 4444 45799999999999997
No 174
>3c3w_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 2.20A {Mycobacterium tuberculosis}
Probab=22.17 E-value=58 Score=26.75 Aligned_cols=39 Identities=15% Similarity=0.248 Sum_probs=24.8
Q ss_pred HHHHHhhcCCCEEEEcCCCC--cHHHHHHhc-----CCCeEEEecc
Q 038300 70 FFNILKNLSPDLLIYDLIQP--WAPALASSL-----NIPAVYFLVS 108 (401)
Q Consensus 70 l~~~l~~~~pD~vI~D~~~~--~~~~~A~~l-----gIP~v~~~~~ 108 (401)
..+.+++..||+||.|..++ .|..+++.+ ++|+|+++..
T Consensus 39 al~~l~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~ 84 (225)
T 3c3w_A 39 AMARVPAARPDVAVLDVRLPDGNGIELCRDLLSRMPDLRCLILTSY 84 (225)
T ss_dssp HHHHHHHHCCSEEEECSEETTEEHHHHHHHHHHHCTTCEEEEGGGS
T ss_pred HHHHHhhcCCCEEEEeCCCCCCCHHHHHHHHHHhCCCCcEEEEECC
Confidence 33445556899999996554 355555433 5777776554
No 175
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=21.44 E-value=47 Score=25.08 Aligned_cols=47 Identities=11% Similarity=0.080 Sum_probs=30.5
Q ss_pred hCCcEEecCCccchhhHHHHHHhhC-eeeeeeccCCCCCCHHHHHHHHHHHhc
Q 038300 312 LGVPIIAMPMHVDQPLNARLVEDVG-IGLEVRRNKCGRIQREEMARVIKEVVM 363 (401)
Q Consensus 312 ~GvP~i~~P~~~dQ~~na~~~~~~g-~g~~l~~~~~~~~~~~~l~~~i~~~l~ 363 (401)
..+|+|++--..+ ........+.| +--.+. ..++.++|.++|+.++.
T Consensus 78 ~~~~ii~ls~~~~-~~~~~~~~~~g~~~~~l~----kP~~~~~L~~~i~~~~~ 125 (154)
T 2rjn_A 78 PDIERVVISGYAD-AQATIDAVNRGKISRFLL----KPWEDEDVFKVVEKGLQ 125 (154)
T ss_dssp TTSEEEEEECGGG-HHHHHHHHHTTCCSEEEE----SSCCHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCC-HHHHHHHHhccchheeee----CCCCHHHHHHHHHHHHH
Confidence 4678887755444 33444444555 533441 35789999999999987
No 176
>1efd_N Ferrichrome-binding periplasmic protein; periplasmic binding protein-siderophore complex, FHUD complex with gallichrome; HET: GCR; 1.90A {Escherichia coli} SCOP: c.92.2.1 PDB: 1k7s_N* 1k2v_N* 1esz_A*
Probab=21.04 E-value=78 Score=26.86 Aligned_cols=36 Identities=11% Similarity=0.271 Sum_probs=22.9
Q ss_pred HHHHHHhhcCCCEEEEcCCCCcHHHHHHhcCCCeEEEe
Q 038300 69 SFFNILKNLSPDLLIYDLIQPWAPALASSLNIPAVYFL 106 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~~~~~~A~~lgIP~v~~~ 106 (401)
.++.+ -+++||+||..........-.++.| |++.+.
T Consensus 58 n~E~i-~~l~PDLIi~~~~~~~~~~~L~~i~-pvv~~~ 93 (266)
T 1efd_N 58 NLELL-TEMKPSFMVWSAGYGPSPEMLARIA-PGRGFN 93 (266)
T ss_dssp CHHHH-HHHCCSEEEEETTSSSCHHHHHHHS-CEEEEC
T ss_pred CHHHH-HhcCCCEEEeccccHHHHHHHHhhC-CEEEec
Confidence 34444 3479999997644333344556778 988774
No 177
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=20.97 E-value=1.7e+02 Score=22.19 Aligned_cols=40 Identities=13% Similarity=0.106 Sum_probs=25.6
Q ss_pred HHHHHHhhcCCCEEEEcCCCCc--HHHHHH----hcCCCeEEEecc
Q 038300 69 SFFNILKNLSPDLLIYDLIQPW--APALAS----SLNIPAVYFLVS 108 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~~--~~~~A~----~lgIP~v~~~~~ 108 (401)
...+.+++.+||+||.|...+. |..+++ ...+|.|.++..
T Consensus 62 ~al~~l~~~~~dlvilD~~l~~~~g~~l~~~lr~~~~~~ii~~s~~ 107 (164)
T 3t8y_A 62 EAVEKAIELKPDVITMDIEMPNLNGIEALKLIMKKAPTRVIMVSSL 107 (164)
T ss_dssp HHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHHSCCEEEEEESS
T ss_pred HHHHHhccCCCCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEecC
Confidence 4445566678999999965443 444443 335777777654
No 178
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=20.90 E-value=89 Score=17.30 Aligned_cols=29 Identities=7% Similarity=0.109 Sum_probs=20.3
Q ss_pred HHHHHHHHHHhcCcccHHHHHHHHHHHHHHH
Q 038300 352 EEMARVIKEVVMEREGEKIKRKTREMGEKIK 382 (401)
Q Consensus 352 ~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~ 382 (401)
.++...+++++.. +..+..-+.++++.+.
T Consensus 4 ~QLEdKVEeLl~~--n~~Le~EV~RLk~LL~ 32 (34)
T 1uo4_A 4 KQIEDKGEEILSK--LYHIENELARIKKLLG 32 (34)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHh--hHHHHHHHHHHHHHHc
Confidence 4677788888863 5677777777776653
No 179
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=20.63 E-value=73 Score=26.35 Aligned_cols=32 Identities=25% Similarity=0.311 Sum_probs=23.6
Q ss_pred CCCEEE-EcCCCC-cHHHHHHhcCCCeEEEeccc
Q 038300 78 SPDLLI-YDLIQP-WAPALASSLNIPAVYFLVSS 109 (401)
Q Consensus 78 ~pD~vI-~D~~~~-~~~~~A~~lgIP~v~~~~~~ 109 (401)
.||+|| +|+--- .+..-|.++|||.|.+.-+.
T Consensus 115 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDTn 148 (208)
T 1vi6_A 115 EPEVVFVNDPAIDKQAVSEATAVGIPVVALCDSN 148 (208)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCEEEEECCCcchhHHHHHHHhCCCEEEEeCCC
Confidence 599765 786433 35577899999999997653
No 180
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=20.18 E-value=1.5e+02 Score=23.59 Aligned_cols=41 Identities=27% Similarity=0.280 Sum_probs=26.2
Q ss_pred HHHHHHhhcCCCEEEEcCCCC--cHHHHHHhc----CCCeEEEeccc
Q 038300 69 SFFNILKNLSPDLLIYDLIQP--WAPALASSL----NIPAVYFLVSS 109 (401)
Q Consensus 69 ~l~~~l~~~~pD~vI~D~~~~--~~~~~A~~l----gIP~v~~~~~~ 109 (401)
...+.+++..||+||.|...+ .|..+++.+ ..|+|+++...
T Consensus 49 ~al~~~~~~~~dlvi~D~~~p~~~g~~~~~~l~~~~~~pii~lt~~~ 95 (205)
T 1s8n_A 49 EAVELAELHKPDLVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFS 95 (205)
T ss_dssp HHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHTTCSCEEEEEEGG
T ss_pred HHHHHHhhcCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEecCC
Confidence 344455666899999997655 355555433 46777776543
No 181
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=20.02 E-value=29 Score=28.47 Aligned_cols=47 Identities=13% Similarity=0.194 Sum_probs=30.8
Q ss_pred cceEEecCCchhHHHHHHhCCcEEecCCcc-chhhHHHHHHhh--Ceeeee
Q 038300 294 IGGFVSHCGWSSVMESMRLGVPIIAMPMHV-DQPLNARLVEDV--GIGLEV 341 (401)
Q Consensus 294 ~~~~i~hgG~~s~~eal~~GvP~i~~P~~~-dQ~~na~~~~~~--g~g~~l 341 (401)
++.+||+||........ ..+|+|-+|..+ |=..--+.+.+. .+|+.-
T Consensus 52 ~dVIISRGgta~~lr~~-~~iPVV~I~~s~~Dil~al~~a~~~~~kIavvg 101 (196)
T 2q5c_A 52 VDAIISRGATSDYIKKS-VSIPSISIKVTRFDTMRAVYNAKRFGNELALIA 101 (196)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHHHHHGGGCSEEEEEE
T ss_pred CeEEEECChHHHHHHHh-CCCCEEEEcCCHhHHHHHHHHHHhhCCcEEEEe
Confidence 33499999988888875 689999999864 433333333332 456554
No 182
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=20.02 E-value=86 Score=30.05 Aligned_cols=36 Identities=14% Similarity=0.301 Sum_probs=28.7
Q ss_pred hHHHHHHHhhcCCCEEEEcCCCCcHHHHHHhc-------CCCeEEE
Q 038300 67 SPSFFNILKNLSPDLLIYDLIQPWAPALASSL-------NIPAVYF 105 (401)
Q Consensus 67 ~~~l~~~l~~~~pD~vI~D~~~~~~~~~A~~l-------gIP~v~~ 105 (401)
...+++.+++.+||++|.+. .+..+|+++ |||++.+
T Consensus 423 ~~~l~~~i~~~~pDLiig~~---~~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 423 LWHFRSLMFTRQPDFMIGNS---YGKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHHHHHHCCSEEEECG---GGHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHHHhhcCCCEEEECc---chHHHHHHhhcccccCCCCeEEe
Confidence 33567778888999999885 468889899 9999765
Done!