BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038303
(461 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 322 bits (824), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 177/483 (36%), Positives = 276/483 (57%), Gaps = 35/483 (7%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
N YTF +KA + +H ++ D+F+ NSL+H Y + D+ SA ++F
Sbjct: 130 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 189
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSACSSLVSHK 125
++ DVVSW ++I+G + G +A+++F + DVK + T+V VLSAC+ + + +
Sbjct: 190 TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLE 249
Query: 126 LGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYA 185
G+ + ++ N N+ L NA+LD Y +CGS+ LF M +++ V+WTTM+ GYA
Sbjct: 250 FGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA 309
Query: 186 -------------------------------ERGFCKEAVSVFQEMEKTKEAEPNEATLV 214
+ G EA+ VF E++ K + N+ TLV
Sbjct: 310 ISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLV 369
Query: 215 NVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAY 274
+ LSAC+ + AL G+++HSYI ++ + ++ V +A+I+MY KCGD+ + +VFN +
Sbjct: 370 STLSACAQVGALELGRWIHSYIK-KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK 428
Query: 275 KDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLIL 334
+D WS +I GLAM+GCG +A+ +F M V P+ VTF + ACSH GLVD+ L
Sbjct: 429 RDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESL 488
Query: 335 FKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIHR 394
F M + Y IVP+ +HYAC+VD+ GR+G LE+A FI MPI SVWGALL AC+IH
Sbjct: 489 FHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHA 548
Query: 395 NDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGADRWEDTNKIRDEIRRMGLKKKTGCSWI 454
N + + L+ + + G L+SN +A +WE+ +++R +R GLKK+ GCS I
Sbjct: 549 NLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSI 608
Query: 455 EVN 457
E++
Sbjct: 609 EID 611
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 169/318 (53%), Gaps = 20/318 (6%)
Query: 31 EIHAHVIEYGHLHDIFIQNSLLHFYV--TVKDIFSAHQIFNSVVFPDVVSWTTIISG--- 85
+ H H+I G D + + L + + A ++F+ + P+ +W T+I
Sbjct: 48 QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYAS 107
Query: 86 -----LSKCGFHKEAIDMFCGIDVKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNE 140
LS F +DM PN T ++ A + + S LG+++H ++++
Sbjct: 108 GPDPVLSIWAF----LDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVG 163
Query: 141 NNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEM 200
+++ + N+++ Y CG L S +F + +++VVSW +MI G+ ++G +A+ +F++M
Sbjct: 164 SDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM 223
Query: 201 EKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCG 260
E +++ + + T+V VLSAC+ I L FG+ V SYI ++V+ + NA+++MY KCG
Sbjct: 224 E-SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEEN-RVNVNLTLANAMLDMYTKCG 281
Query: 261 DVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALIS 320
+ A ++F+ + KD ++W+T++ G A++ A ++ + M D V + ALIS
Sbjct: 282 SIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK----DIVAWNALIS 337
Query: 321 ACSHGGLVDQGLILFKAM 338
A G ++ LI+F +
Sbjct: 338 AYEQNGKPNEALIVFHEL 355
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 316 bits (809), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 166/484 (34%), Positives = 287/484 (59%), Gaps = 36/484 (7%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
N YTF LK+C+ + ++ +IH HV++ G D+++ SL+ YV + AH++F
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192
Query: 69 N-------------------------------SVVFPDVVSWTTIISGLSKCGFHKEAID 97
+ + DVVSW +ISG ++ G +KEA++
Sbjct: 193 DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 252
Query: 98 MFCGI---DVKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYI 154
+F + +V+P+ +T+V+V+SAC+ S +LG+ +H + +N+ + NA++D Y
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 155 RCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLV 214
+CG L + LF ++P ++V+SW T+IGGY KEA+ +FQEM ++ E PN+ T++
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTML 371
Query: 215 NVLSACSSISALSFGKYVHSYISTRYD-LSVSNLVGNAVINMYVKCGDVGIAIQVFNMLA 273
++L AC+ + A+ G+++H YI R ++ ++ + ++I+MY KCGD+ A QVFN +
Sbjct: 372 SILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL 431
Query: 274 YKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLI 333
+K SW+ +I G AM+G + LFS M + PDD+TF+ L+SACSH G++D G
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRH 491
Query: 334 LFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIH 393
+F+ M+ Y++ P+++HY C++D+ G +GL +EAE I M +E + +W +LL AC++H
Sbjct: 492 IFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMH 551
Query: 394 RNDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGADRWEDTNKIRDEIRRMGLKKKTGCSW 453
N E+ + ++L+ + + G++ L+SN +A A RW + K R + G+KK GCS
Sbjct: 552 GNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSS 611
Query: 454 IEVN 457
IE++
Sbjct: 612 IEID 615
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 138/313 (44%), Gaps = 43/313 (13%)
Query: 112 VSVLSACSSLVSHKLGKAIHAHSLR-NLNENNIILDNAILDFYIRCGSLASCGY---LFV 167
+S+L C +L S ++ IHA ++ L+ N L + +++F I Y +F
Sbjct: 37 LSLLHNCKTLQSLRI---IHAQMIKIGLHNTNYAL-SKLIEFCILSPHFEGLPYAISVFK 92
Query: 168 KMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALS 227
+ + N++ W TM G+A A+ ++ M + PN T VL +C+ A
Sbjct: 93 TIQEPNLLIWNTMFRGHALSSDPVSALKLYVCM-ISLGLLPNSYTFPFVLKSCAKSKAFK 151
Query: 228 FGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNM---------------- 271
G+ +H ++ + + V ++I+MYV+ G + A +VF+
Sbjct: 152 EGQQIHGHV-LKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGY 210
Query: 272 ---------------LAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFI 316
+ KD +SW+ +ISG A G ++AL+LF M+ V PD+ T +
Sbjct: 211 ASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMV 270
Query: 317 ALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPI 376
++SAC+ G ++ G + + + ++ ++D+Y + G LE A +P
Sbjct: 271 TVVSACAQSGSIELGRQVHLWIDD-HGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 377 EAEWSVWGALLNA 389
+ S W L+
Sbjct: 330 KDVIS-WNTLIGG 341
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 307 bits (787), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 163/489 (33%), Positives = 272/489 (55%), Gaps = 41/489 (8%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
N Y+F L ACS + K +++H+ + + L D++I ++L+ Y ++ A ++F
Sbjct: 151 NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVF 210
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSACSSLVSHK 125
+ + +VVSW ++I+ + G EA+D+F + V+P+ TL SV+SAC+SL + K
Sbjct: 211 DEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIK 270
Query: 126 LGKAIHAHSLRNLN-ENNIILDNAILDFYIRCGSLASC--------------------GY 164
+G+ +H ++N N+IIL NA +D Y +C + GY
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGY 330
Query: 165 -----------LFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATL 213
+F KM +RNVVSW +I GY + G +EA+S+F + K + P +
Sbjct: 331 AMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC-LLKRESVCPTHYSF 389
Query: 214 VNVLSACSSISALSFGKYVHSYI---STRYDLSVSN--LVGNAVINMYVKCGDVGIAIQV 268
N+L AC+ ++ L G H ++ ++ + VGN++I+MYVKCG V V
Sbjct: 390 ANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLV 449
Query: 269 FNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLV 328
F + +D +SW+ +I G A NG G +AL+LF M+ + PD +T I ++SAC H G V
Sbjct: 450 FRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFV 509
Query: 329 DQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLN 388
++G F +M+ + + P HY C+VD+ GRAG LEEA++ I EMP++ + +WG+LL
Sbjct: 510 EEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLA 569
Query: 389 ACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGADRWEDTNKIRDEIRRMGLKKK 448
AC++HRN + + + L+ + + G + L+SN +A +WED +R +R+ G+ K+
Sbjct: 570 ACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQ 629
Query: 449 TGCSWIEVN 457
GCSWI++
Sbjct: 630 PGCSWIKIQ 638
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 204/431 (47%), Gaps = 82/431 (19%)
Query: 32 IHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSVVFPDVVSWTTIISGLSKCGF 91
+HA VI+ G ++IFIQN L+ Y + Q+F+ + ++ +W ++++GL+K GF
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 92 HKEAIDMFCGIDVKP----------------------------------NANTLVSVLSA 117
EA +F + + N + SVLSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 118 CSSLVSHKLGKAIHAHSL--RNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVV 175
CS L + + K + HSL ++ +++ + +A++D Y +CG++ +F +M RNVV
Sbjct: 162 CSGL--NDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 176 SWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSY 235
SW ++I + + G EA+ VFQ M +++ EP+E TL +V+SAC+S+SA+ G+ VH
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESR-VEPDEVTLASVISACASLSAIKVGQEVHGR 278
Query: 236 ISTRYDLSVSNLVGNAVINMYVKCGDV-----------------------GIAIQ----- 267
+ L ++ NA ++MY KC + G A+
Sbjct: 279 VVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKA 338
Query: 268 ---VFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACS- 323
+F +A ++ +SW+ +I+G NG +AL LF L+ +V P +F ++ AC+
Sbjct: 339 ARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACAD 398
Query: 324 ----HGGLVDQGLIL---FKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPI 376
H G+ +L FK S + + ++DMY + G +EE R+M +
Sbjct: 399 LAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGN---SLIDMYVKCGCVEEGYLVFRKM-M 454
Query: 377 EAEWSVWGALL 387
E + W A++
Sbjct: 455 ERDCVSWNAMI 465
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 306 bits (785), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/456 (35%), Positives = 262/456 (57%), Gaps = 8/456 (1%)
Query: 7 SYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQ 66
S + +TF LKACS Q +HA V G D+F+QN L+ Y + + SA
Sbjct: 116 SPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSART 175
Query: 67 IFNSVVFPD--VVSWTTIISGLSKCGFHKEAIDMFC---GIDVKPNANTLVSVLSACSSL 121
+F + P+ +VSWT I+S ++ G EA+++F +DVKP+ LVSVL+A + L
Sbjct: 176 VFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCL 235
Query: 122 VSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMI 181
K G++IHA ++ E L ++ Y +CG +A+ LF KM N++ W MI
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295
Query: 182 GGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYD 241
GYA+ G+ +EA+ +F EM K+ P+ ++ + +SAC+ + +L + ++ Y+ R D
Sbjct: 296 SGYAKNGYAREAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVG-RSD 353
Query: 242 LSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFS 301
+ +A+I+M+ KCG V A VF+ +D + WS +I G ++G R+A+ L+
Sbjct: 354 YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYR 413
Query: 302 LMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRA 361
M V P+DVTF+ L+ AC+H G+V +G F M+ ++I PQ QHYACV+D+ GRA
Sbjct: 414 AMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRA 472
Query: 362 GLLEEAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMS 421
G L++A I+ MP++ +VWGALL+AC+ HR+ E+ + Q L + + G + +S
Sbjct: 473 GHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLS 532
Query: 422 NTFAGADRWEDTNKIRDEIRRMGLKKKTGCSWIEVN 457
N +A A W+ ++R ++ GL K GCSW+EV
Sbjct: 533 NLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVR 568
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 194/374 (51%), Gaps = 21/374 (5%)
Query: 31 EIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSVVFPDVVSWTTIISGLSKCG 90
+IHA ++ G F+ L+H + DI A Q+F+ + P + W II G S+
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 91 FHKEAIDMFCGID---VKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILDN 147
++A+ M+ + V P++ T +L ACS L ++G+ +HA R + ++ + N
Sbjct: 99 HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158
Query: 148 AILDFYIRCGSLASCGYLF--VKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKE 205
++ Y +C L S +F + +P+R +VSWT ++ YA+ G EA+ +F +M K +
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM-D 217
Query: 206 AEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIA 265
+P+ LV+VL+A + + L G+ +H+ + + L + + ++ MY KCG V A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASV-VKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 266 IQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHG 325
+F+ + + I W+ +ISG A NG R+A+ +F MI V PD ++ + ISAC+
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336
Query: 326 GLVDQGLILFKAMSTVYEIVPQMQHY------ACVVDMYGRAGLLEEAEAFIREMPIEAE 379
G ++Q ++YE V + + + ++DM+ + G +E A + + ++ +
Sbjct: 337 GSLEQA-------RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR-LVFDRTLDRD 388
Query: 380 WSVWGALLNACRIH 393
VW A++ +H
Sbjct: 389 VVVWSAMIVGYGLH 402
>sp|Q9SZK1|PP355_ARATH Pentatricopeptide repeat-containing protein At4g38010
OS=Arabidopsis thaliana GN=PCMP-E45 PE=3 SV=1
Length = 559
Score = 305 bits (782), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 160/452 (35%), Positives = 266/452 (58%), Gaps = 5/452 (1%)
Query: 7 SYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQ 66
S + +TF KAC ++ +IH V + G DI++QNSL+HFY + +A +
Sbjct: 103 SPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACK 162
Query: 67 IFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGIDVKPNANTLVSVLSACSSLVSHKL 126
+F + DVVSWT II+G ++ G +KEA+D F +DV+PN T V VL + + L
Sbjct: 163 VFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSL 222
Query: 127 GKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAE 186
GK IH L+ + ++ NA++D Y++C L+ +F ++ K++ VSW +MI G
Sbjct: 223 GKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVH 282
Query: 187 RGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSN 246
KEA+ +F M+ + +P+ L +VLSAC+S+ A+ G++VH YI T +
Sbjct: 283 CERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTA-GIKWDT 341
Query: 247 LVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIIN 306
+G A+++MY KCG + A+++FN + K+ +W+ ++ GLA++G G ++L+ F M+
Sbjct: 342 HIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKL 401
Query: 307 AVFPDDVTFIALISACSHGGLVDQGLILFKAM-STVYEIVPQMQHYACVVDMYGRAGLLE 365
P+ VTF+A ++AC H GLVD+G F M S Y + P+++HY C++D+ RAGLL+
Sbjct: 402 GFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLD 461
Query: 366 EAEAFIREMPIEAEWSVWGALLNACRIHRND--EMFDRIRQDLVNKKGVSVGTFALMSNT 423
EA ++ MP++ + + GA+L+AC+ +R E+ I ++ + G + L+SN
Sbjct: 462 EALELVKAMPVKPDVRICGAILSACK-NRGTLMELPKEILDSFLDIEFEDSGVYVLLSNI 520
Query: 424 FAGADRWEDTNKIRDEIRRMGLKKKTGCSWIE 455
FA RW+D +IR ++ G+ K G S+IE
Sbjct: 521 FAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 182/373 (48%), Gaps = 21/373 (5%)
Query: 31 EIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSVVFPDV------VSWTTIIS 84
+I +I L D I N ++ F D S ++SV+ + S+ T++S
Sbjct: 24 QIQTQLITRDLLRDDLIINKVVTFLGKSADFAS----YSSVILHSIRSVLSSFSYNTLLS 79
Query: 85 GLSKCGFHKEAI---DMFCGIDVKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNEN 141
+ C + I F P+ T V AC + GK IH + +
Sbjct: 80 SYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYD 139
Query: 142 NIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEME 201
+I + N+++ FY CG + +F +MP R+VVSWT +I G+ G KEA+ F +M
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM- 198
Query: 202 KTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGD 261
+ EPN AT V VL + + LS GK +H I R L +S GNA+I+MYVKC
Sbjct: 199 ---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASL-ISLETGNALIDMYVKCEQ 254
Query: 262 VGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINA-VFPDDVTFIALIS 320
+ A++VF L KDK+SW+++ISGL ++A+ LFSLM ++ + PD +++S
Sbjct: 255 LSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLS 314
Query: 321 ACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEW 380
AC+ G VD G + + + T I +VDMY + G +E A + + +
Sbjct: 315 ACASLGAVDHGRWVHEYILTA-GIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVF 373
Query: 381 SVWGALLNACRIH 393
+ W ALL IH
Sbjct: 374 T-WNALLGGLAIH 385
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 81/201 (40%), Gaps = 19/201 (9%)
Query: 208 PNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGI--A 265
P ++ L+ ++S CSS+ K + + + TR DL +L+ N V+ K D +
Sbjct: 4 PEKSVLLELISRCSSLRVF---KQIQTQLITR-DLLRDDLIINKVVTFLGKSADFASYSS 59
Query: 266 IQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHG 325
+ + ++ + S++T++S A+ R + + + N PD TF + AC
Sbjct: 60 VILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKF 119
Query: 326 GLVDQGLILFKAMSTVYEIVPQMQHYA------CVVDMYGRAGLLEEAEAFIREMPIEAE 379
+ +G ++ IV +M Y +V YG G A EMP+
Sbjct: 120 SGIREG-------KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDV 172
Query: 380 WSVWGALLNACRIHRNDEMFD 400
S G + R E D
Sbjct: 173 VSWTGIITGFTRTGLYKEALD 193
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 301 bits (771), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 159/488 (32%), Positives = 271/488 (55%), Gaps = 36/488 (7%)
Query: 4 CPSSYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFS 63
C S +H+T+ K C+ I HV++ + N+ +H + + D+ +
Sbjct: 150 CESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMEN 209
Query: 64 AHQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGID---VKPNANTLVSVLSACSS 120
A ++F+ D+VSW +I+G K G ++AI ++ ++ VKP+ T++ ++S+CS
Sbjct: 210 ARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSM 269
Query: 121 LVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTM 180
L GK + + N I L NA++D + +CG + +F + KR +VSWTTM
Sbjct: 270 LGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTM 329
Query: 181 IGGYAERGFC-------------------------------KEAVSVFQEMEKTKEAEPN 209
I GYA G ++A+++FQEM+ T +P+
Sbjct: 330 ISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQ-TSNTKPD 388
Query: 210 EATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVF 269
E T+++ LSACS + AL G ++H YI +Y LS++ +G ++++MY KCG++ A+ VF
Sbjct: 389 EITMIHCLSACSQLGALDVGIWIHRYIE-KYSLSLNVALGTSLVDMYAKCGNISEALSVF 447
Query: 270 NMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVD 329
+ + ++ ++++ +I GLA++G A+ F+ MI + PD++TFI L+SAC HGG++
Sbjct: 448 HGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQ 507
Query: 330 QGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNA 389
G F M + + + PQ++HY+ +VD+ GRAGLLEEA+ + MP+EA+ +VWGALL
Sbjct: 508 TGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFG 567
Query: 390 CRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGADRWEDTNKIRDEIRRMGLKKKT 449
CR+H N E+ ++ + L+ G + L+ + A+ WED + R + G++K
Sbjct: 568 CRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIP 627
Query: 450 GCSWIEVN 457
GCS IEVN
Sbjct: 628 GCSSIEVN 635
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 188/397 (47%), Gaps = 45/397 (11%)
Query: 10 HYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAH--QI 67
H L+ C L H K +I A +I G + D F + L+ F + + + +I
Sbjct: 53 HNPLLSLLEKCKLL-LHLK--QIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKI 109
Query: 68 FNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI------DVKPNANTLVSVLSACSSL 121
+ P++ SW I G S+ KE+ ++ + + +P+ T + C+ L
Sbjct: 110 LKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADL 169
Query: 122 VSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMI 181
LG I H L+ E + NA + + CG + + +F + P R++VSW +I
Sbjct: 170 RLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLI 229
Query: 182 GGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYD 241
GY + G ++A+ V++ ME ++ +P++ T++ ++S+CS + L+ GK + Y+
Sbjct: 230 NGYKKIGEAEKAIYVYKLME-SEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN-G 287
Query: 242 LSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGC--------- 292
L ++ + NA+++M+ KCGD+ A ++F+ L + +SW+T+ISG A G
Sbjct: 288 LRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFD 347
Query: 293 ----------------------GRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQ 330
G+ AL LF M + PD++T I +SACS G +D
Sbjct: 348 DMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDV 407
Query: 331 GLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEA 367
G+ + + + Y + + +VDMY + G + EA
Sbjct: 408 GIWIHRYIEK-YSLSLNVALGTSLVDMYAKCGNISEA 443
>sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containing protein At5g59200,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3
SV=1
Length = 544
Score = 299 bits (766), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/483 (35%), Positives = 272/483 (56%), Gaps = 43/483 (8%)
Query: 12 TFTQALKAC-SLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNS 70
T L++C ++AH IHA +I H D F+ L+ T+ + A+ +F+
Sbjct: 31 TLISVLRSCKNIAH----VPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSY 86
Query: 71 VVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSACSSLVSHKLG 127
V P+V +T +I G G + + ++ + V P+ + SVL AC K+
Sbjct: 87 VSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDL----KVC 142
Query: 128 KAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAER 187
+ IHA L+ ++ + +++ Y + G L + +F +MP R+ V+ T MI Y+E
Sbjct: 143 REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSEC 202
Query: 188 GFCKEAVSVFQ---------------------EMEKTKE---------AEPNEATLVNVL 217
GF KEA+ +FQ EM K E NE T V VL
Sbjct: 203 GFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVL 262
Query: 218 SACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDK 277
SACS + AL G++VHS++ + + +SN VGNA+INMY +CGD+ A +VF ++ KD
Sbjct: 263 SACSDLGALELGRWVHSFVENQR-MELSNFVGNALINMYSRCGDINEARRVFRVMRDKDV 321
Query: 278 ISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKA 337
IS++T+ISGLAM+G +A+ F M+ P+ VT +AL++ACSHGGL+D GL +F +
Sbjct: 322 ISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNS 381
Query: 338 MSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIHRNDE 397
M V+ + PQ++HY C+VD+ GR G LEEA FI +PIE + + G LL+AC+IH N E
Sbjct: 382 MKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNME 441
Query: 398 MFDRIRQDLVNKKGVSVGTFALMSNTFAGADRWEDTNKIRDEIRRMGLKKKTGCSWIEVN 457
+ ++I + L + GT+ L+SN +A + +W+++ +IR+ +R G++K+ GCS IEV+
Sbjct: 442 LGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVD 501
Query: 458 PSI 460
I
Sbjct: 502 NQI 504
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 160/345 (46%), Gaps = 41/345 (11%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
++Y T LKAC L + EIHA V++ G + ++ Y ++ +A ++F
Sbjct: 126 DNYVITSVLKACDL----KVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMF 181
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGIDVK----------------------- 105
+ + D V+ T +I+ S+CGF KEA+++F + +K
Sbjct: 182 DEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALE 241
Query: 106 -----------PNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYI 154
N T V VLSACS L + +LG+ +H+ E + + NA+++ Y
Sbjct: 242 LFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYS 301
Query: 155 RCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLV 214
RCG + +F M ++V+S+ TMI G A G EA++ F++M + PN+ TLV
Sbjct: 302 RCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDM-VNRGFRPNQVTLV 360
Query: 215 NVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQ-VFNMLA 273
+L+ACS L G V + + +++ ++++ + G + A + + N+
Sbjct: 361 ALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPI 420
Query: 274 YKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIAL 318
D I T++S ++G + + + + + PD T++ L
Sbjct: 421 EPDHIMLGTLLSACKIHG-NMELGEKIAKRLFESENPDSGTYVLL 464
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 297 bits (760), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 147/415 (35%), Positives = 249/415 (60%), Gaps = 4/415 (0%)
Query: 49 NSLLHFYVTVKDIFSAHQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGID---VK 105
N+LL Y D+ SA +F + VVS+T++I+G ++ G EA+ +F ++ +
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 106 PNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYL 165
P+ T+ +VL+ C+ GK +H N +I + NA++D Y +CGS+ +
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 166 FVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISA 225
F +M ++++SW T+IGGY++ + EA+S+F + + K P+E T+ VL AC+S+SA
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 226 LSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVIS 285
G+ +H YI R V N++++MY KCG + +A +F+ +A KD +SW+ +I+
Sbjct: 515 FDKGREIHGYI-MRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 573
Query: 286 GLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIV 345
G M+G G++A+ LF+ M + D+++F++L+ ACSH GLVD+G F M +I
Sbjct: 574 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 633
Query: 346 PQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQD 405
P ++HYAC+VDM R G L +A FI MPI + ++WGALL CRIH + ++ +++ +
Sbjct: 634 PTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK 693
Query: 406 LVNKKGVSVGTFALMSNTFAGADRWEDTNKIRDEIRRMGLKKKTGCSWIEVNPSI 460
+ + + G + LM+N +A A++WE ++R I + GL+K GCSWIE+ +
Sbjct: 694 VFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRV 748
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 195/372 (52%), Gaps = 15/372 (4%)
Query: 1 MLSCPSSYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKD 60
M+S + YTF+ K+ S ++H +++ G + NSL+ FY+ +
Sbjct: 186 MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR 245
Query: 61 IFSAHQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFC-----GIDVKPNANTLVSVL 115
+ SA ++F+ + DV+SW +II+G G ++ + +F GI++ + T+VSV
Sbjct: 246 VDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI--DLATIVSVF 303
Query: 116 SACSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVV 175
+ C+ LG+A+H+ ++ N +LD Y +CG L S +F +M R+VV
Sbjct: 304 AGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVV 363
Query: 176 SWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSY 235
S+T+MI GYA G EAV +F+EME+ + P+ T+ VL+ C+ L GK VH +
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEE-EGISPDVYTVTAVLNCCARYRLLDEGKRVHEW 422
Query: 236 ISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQ 295
I DL V NA+++MY KCG + A VF+ + KD ISW+T+I G + N +
Sbjct: 423 IKEN-DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 481
Query: 296 ALQLFSLMIINAVF-PDDVTFIALISACSHGGLVDQGL-ILFKAMSTVYEIVPQMQHYA- 352
AL LF+L++ F PD+ T ++ AC+ D+G I M Y +H A
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY---FSDRHVAN 538
Query: 353 CVVDMYGRAGLL 364
+VDMY + G L
Sbjct: 539 SLVDMYAKCGAL 550
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 143/283 (50%), Gaps = 10/283 (3%)
Query: 11 YTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNS 70
YT T L C+ + +H + E DIF+ N+L+ Y + A +F+
Sbjct: 398 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSE 457
Query: 71 VVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI----DVKPNANTLVSVLSACSSLVSHKL 126
+ D++SW TII G SK + EA+ +F + P+ T+ VL AC+SL +
Sbjct: 458 MRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK 517
Query: 127 GKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAE 186
G+ IH + +RN ++ + N+++D Y +CG+L LF + +++VSWT MI GY
Sbjct: 518 GREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM 577
Query: 187 RGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSN 246
GF KEA+++F +M + E +E + V++L ACS + G + + R++ +
Sbjct: 578 HGFGKEAIALFNQMRQAG-IEADEISFVSLLYACSHSGLVDEGWRFFNIM--RHECKIEP 634
Query: 247 LVGN--AVINMYVKCGDVGIAIQ-VFNMLAYKDKISWSTVISG 286
V + +++M + GD+ A + + NM D W ++ G
Sbjct: 635 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 677
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 162/358 (45%), Gaps = 27/358 (7%)
Query: 25 PH-QKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSVVFPDVVSWTTII 83
PH Q EI + V ++ IF + SL TV D + F+ V T +
Sbjct: 19 PHLQNQKEIRSGVRVRKYV--IFNRASLR----TVSDCVDSITTFDR----SVTDANTQL 68
Query: 84 SGLSKCGFHKEAIDMFC---GIDVKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNE 140
+ G + A+ + C D+ P TL SVL C+ S K GK + +
Sbjct: 69 RRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNF----IRG 122
Query: 141 NNIILDNAILD----FYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSV 196
N ++D+ + Y CG L +F ++ + W ++ A+ G ++ +
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 197 FQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMY 256
F++M + E + T V + SS+ ++ G+ +H +I + N VGN+++ Y
Sbjct: 183 FKKM-MSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFI-LKSGFGERNSVGNSLVAFY 240
Query: 257 VKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFI 316
+K V A +VF+ + +D ISW+++I+G NG + L +F M+++ + D T +
Sbjct: 241 LKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIV 300
Query: 317 ALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREM 374
++ + C+ L+ G + ++ + + ++DMY + G L+ A+A REM
Sbjct: 301 SVFAGCADSRLISLGRAV-HSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM 357
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 295 bits (756), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 157/469 (33%), Positives = 267/469 (56%), Gaps = 9/469 (1%)
Query: 1 MLSCPSSYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKD 60
+LS SS + T+ + C AL +H H+++ G D F+ L+ Y +
Sbjct: 68 VLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGS 127
Query: 61 IFSAHQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCG---IDVKPNANTLVSVLSA 117
+ A ++F+ + W + L+ G +E + ++ I V+ + T VL A
Sbjct: 128 VDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKA 187
Query: 118 CSS---LVSHKL-GKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRN 173
C + V+H + GK IHAH R +++ + ++D Y R G + Y+F MP RN
Sbjct: 188 CVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRN 247
Query: 174 VVSWTTMIGGYAERGFCKEAVSVFQEM-EKTKEAEPNEATLVNVLSACSSISALSFGKYV 232
VVSW+ MI YA+ G EA+ F+EM +TK++ PN T+V+VL AC+S++AL GK +
Sbjct: 248 VVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLI 307
Query: 233 HSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGC 292
H YI R S+ ++ +A++ MY +CG + + +VF+ + +D +SW+++IS ++G
Sbjct: 308 HGYILRRGLDSILPVI-SALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGY 366
Query: 293 GRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYA 352
G++A+Q+F M+ N P VTF++++ ACSH GLV++G LF+ M + I PQ++HYA
Sbjct: 367 GKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYA 426
Query: 353 CVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGV 412
C+VD+ GRA L+EA +++M E VWG+LL +CRIH N E+ +R + L +
Sbjct: 427 CMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPK 486
Query: 413 SVGTFALMSNTFAGADRWEDTNKIRDEIRRMGLKKKTGCSWIEVNPSIF 461
+ G + L+++ +A A W++ +++ + GL+K G W+EV ++
Sbjct: 487 NAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMY 535
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 294 bits (753), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 157/453 (34%), Positives = 260/453 (57%), Gaps = 7/453 (1%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
+ +TF LKA + HAH++++G D F++NSL+ Y + A ++F
Sbjct: 103 SRHTFPPLLKAV-FKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLF 161
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGID---VKPNANTLVSVLSACSSLVSHK 125
+ DVV+WT +I G + G EA+ F + V N T+VSVL A + +
Sbjct: 162 DGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVR 221
Query: 126 LGKAIHAHSLRNLN-ENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGY 184
G+++H L + ++ + ++++D Y +C +F +MP RNVV+WT +I GY
Sbjct: 222 FGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGY 281
Query: 185 AERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSV 244
+ + + VF+EM K+ A PNE TL +VLSAC+ + AL G+ VH Y+ + + +
Sbjct: 282 VQSRCFDKGMLVFEEMLKSDVA-PNEKTLSSVLSACAHVGALHRGRRVHCYM-IKNSIEI 339
Query: 245 SNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMI 304
+ G +I++YVKCG + AI VF L K+ +W+ +I+G A +G R A LF M+
Sbjct: 340 NTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTML 399
Query: 305 INAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLL 364
+ V P++VTF+A++SAC+HGGLV++G LF +M + + P+ HYAC+VD++GR GLL
Sbjct: 400 SSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLL 459
Query: 365 EEAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTF 424
EEA+A I MP+E VWGAL +C +H++ E+ ++ + G + L++N +
Sbjct: 460 EEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLY 519
Query: 425 AGADRWEDTNKIRDEIRRMGLKKKTGCSWIEVN 457
+ + W++ ++R +++ + K G SWIEV
Sbjct: 520 SESQNWDEVARVRKQMKDQQVVKSPGFSWIEVK 552
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 7/188 (3%)
Query: 1 MLSCPSSYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKD 60
ML + N T + L AC+ + +H ++I+ + +L+ YV
Sbjct: 297 MLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGC 356
Query: 61 IFSAHQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSA 117
+ A +F + +V +WT +I+G + G+ ++A D+F + V PN T ++VLSA
Sbjct: 357 LEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSA 416
Query: 118 CSSLVSHKLGKAIHAHSLRNLN-ENNIILDNAILDFYIRCGSLASCGYLFVKMPKR--NV 174
C+ + G+ + N E ++D + R G L L +MP NV
Sbjct: 417 CAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNV 476
Query: 175 VSWTTMIG 182
V W + G
Sbjct: 477 V-WGALFG 483
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 290 bits (741), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/453 (32%), Positives = 260/453 (57%), Gaps = 5/453 (1%)
Query: 11 YTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNS 70
+TF LKAC+ A + +++H+ V++ G HD+ SLL Y + AH++F+
Sbjct: 112 FTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDE 171
Query: 71 VVFPDVVSWTTIISGLSKCGFHKEAIDMF---CGIDVKPNANTLVSVLSACSSLVSHKLG 127
+ VV+WT + SG + G H+EAID+F + VKP++ +V VLSAC + G
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG 231
Query: 128 KAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAER 187
+ I + + N + +++ Y +CG + +F M ++++V+W+TMI GYA
Sbjct: 232 EWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASN 291
Query: 188 GFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNL 247
F KE + +F +M + + +P++ ++V LS+C+S+ AL G++ S I R++ +
Sbjct: 292 SFPKEGIELFLQMLQ-ENLKPDQFSIVGFLSSCASLGALDLGEWGISLID-RHEFLTNLF 349
Query: 248 VGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINA 307
+ NA+I+MY KCG + +VF + KD + + ISGLA NG + + +F
Sbjct: 350 MANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLG 409
Query: 308 VFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEA 367
+ PD TF+ L+ C H GL+ GL F A+S VY + ++HY C+VD++GRAG+L++A
Sbjct: 410 ISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDA 469
Query: 368 EAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGA 427
I +MP+ VWGALL+ CR+ ++ ++ + + ++L+ + + G + +SN ++
Sbjct: 470 YRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVG 529
Query: 428 DRWEDTNKIRDEIRRMGLKKKTGCSWIEVNPSI 460
RW++ ++RD + + G+KK G SWIE+ +
Sbjct: 530 GRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKV 562
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 180/359 (50%), Gaps = 10/359 (2%)
Query: 19 ACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSVVFPDVVS 78
AC++ H Q IH +I + HD F+ N LL + + ++ +F+ FP++
Sbjct: 23 ACTVNHLKQ----IHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFL 78
Query: 79 WTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSACSSLVSHKLGKAIHAHSL 135
+ ++I+G E +D+F I + + T VL AC+ S KLG +H+ +
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 136 RNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVS 195
+ +++ ++L Y G L LF ++P R+VV+WT + GY G +EA+
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 196 VFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINM 255
+F++M + +P+ +V VLSAC + L G+++ Y+ ++ ++ V ++N+
Sbjct: 199 LFKKMVEMG-VKPDSYFIVQVLSACVHVGDLDSGEWIVKYME-EMEMQKNSFVRTTLVNL 256
Query: 256 YVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTF 315
Y KCG + A VF+ + KD ++WST+I G A N ++ ++LF M+ + PD +
Sbjct: 257 YAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSI 316
Query: 316 IALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREM 374
+ +S+C+ G +D G + +E + + ++DMY + G + +EM
Sbjct: 317 VGFLSSCASLGALDLGEWGISLIDR-HEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 289 bits (740), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/461 (33%), Positives = 265/461 (57%), Gaps = 36/461 (7%)
Query: 31 EIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSVVFPDVVSWTTIISGLSKCG 90
++H HV+++G ++++QN+L+ Y + A +F+ DV SW +ISG ++
Sbjct: 156 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMK 215
Query: 91 FHKEAIDMFCGID---VKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILDN 147
++E+I++ ++ V P + TL+ VLSACS + L K +H + E ++ L+N
Sbjct: 216 EYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLEN 275
Query: 148 AILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCK---------------- 191
A+++ Y CG + +F M R+V+SWT+++ GY ERG K
Sbjct: 276 ALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRIS 335
Query: 192 ---------------EAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYI 236
E++ +F+EM+ P+E T+V+VL+AC+ + +L G+++ +YI
Sbjct: 336 WTIMIDGYLRAGCFNESLEIFREMQSAGMI-PDEFTMVSVLTACAHLGSLEIGEWIKTYI 394
Query: 237 STRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQA 296
+ + +VGNA+I+MY KCG A +VF+ + +DK +W+ ++ GLA NG G++A
Sbjct: 395 D-KNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEA 453
Query: 297 LQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVD 356
+++F M ++ PDD+T++ ++SAC+H G+VDQ F M + + I P + HY C+VD
Sbjct: 454 IKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVD 513
Query: 357 MYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGT 416
M GRAGL++EA +R+MP+ VWGALL A R+H ++ M + + ++ + +
Sbjct: 514 MLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAV 573
Query: 417 FALMSNTFAGADRWEDTNKIRDEIRRMGLKKKTGCSWIEVN 457
+AL+ N +AG RW+D ++R +I + +KK G S IEVN
Sbjct: 574 YALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVN 614
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 190/418 (45%), Gaps = 44/418 (10%)
Query: 7 SYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTV--KDIFSA 64
S ++ F L C + ++H+ I G + Q L F+ + + A
Sbjct: 31 SNDYSRFISILGVCKTTDQFK---QLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYA 87
Query: 65 HQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSACS-S 120
+++F + PDVV W +I G SK E + ++ + V P+++T +L+
Sbjct: 88 YKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRD 147
Query: 121 LVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTM 180
+ GK +H H ++ +N+ + NA++ Y CG + +F + K +V SW M
Sbjct: 148 GGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLM 207
Query: 181 IGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRY 240
I GY +E++ + EME+ P TL+ VLSACS + K VH Y+S
Sbjct: 208 ISGYNRMKEYEESIELLVEMERNL-VSPTSVTLLLVLSACSKVKDKDLCKRVHEYVS-EC 265
Query: 241 DLSVSNLVGNAVINMYVKCGDVGIAIQV-------------------------------F 269
S + NA++N Y CG++ IA+++ F
Sbjct: 266 KTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYF 325
Query: 270 NMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVD 329
+ + +D+ISW+ +I G GC ++L++F M + PD+ T +++++AC+H G ++
Sbjct: 326 DQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLE 385
Query: 330 QGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALL 387
G + K +I + ++DMY + G E+A+ +M +++ W A++
Sbjct: 386 IGEWI-KTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFT-WTAMV 441
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 289 bits (739), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 148/452 (32%), Positives = 262/452 (57%), Gaps = 10/452 (2%)
Query: 12 TFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSV 71
T+++ +K C + I H+ GH +F+ N L++ YV + AHQ+F+ +
Sbjct: 63 TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQM 122
Query: 72 VFPDVVSWTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSACSSLVSHKLGK 128
+V+SWTT+IS SKC H++A+++ + +V+PN T SVL +C+ + ++
Sbjct: 123 PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM-- 180
Query: 129 AIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERG 188
+H ++ E+++ + +A++D + + G +F +M + + W ++IGG+A+
Sbjct: 181 -LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNS 239
Query: 189 FCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLV 248
A+ +F+ M++ +ATL +VL AC+ ++ L G H +I +YD + ++
Sbjct: 240 RSDVALELFKRMKRAGFI-AEQATLTSVLRACTGLALLELGMQAHVHI-VKYDQDL--IL 295
Query: 249 GNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAV 308
NA+++MY KCG + A++VFN + +D I+WST+ISGLA NG ++AL+LF M +
Sbjct: 296 NNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGT 355
Query: 309 FPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAE 368
P+ +T + ++ ACSH GL++ G F++M +Y I P +HY C++D+ G+AG L++A
Sbjct: 356 KPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAV 415
Query: 369 AFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGAD 428
+ EM E + W LL ACR+ RN + + + ++ GT+ L+SN +A +
Sbjct: 416 KLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQ 475
Query: 429 RWEDTNKIRDEIRRMGLKKKTGCSWIEVNPSI 460
+W+ +IR +R G+KK+ GCSWIEVN I
Sbjct: 476 KWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQI 507
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 159/342 (46%), Gaps = 19/342 (5%)
Query: 58 VKDIFSAHQIFNSVVFPDV----VSWTTIISGLSKCGFHKE------AIDMFCGIDVKPN 107
+K + S ++F VV T ++S ++ + ++ A+D + +
Sbjct: 1 MKSVMSKIKLFRPVVTLRCSYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWAD 60
Query: 108 ANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFV 167
+ T ++ C S + G I H N + + L N +++ Y++ L LF
Sbjct: 61 SATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFD 120
Query: 168 KMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALS 227
+MP+RNV+SWTTMI Y++ ++A+ + M + PN T +VL +C+ +S +
Sbjct: 121 QMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR-DNVRPNVYTYSSVLRSCNGMSDV- 178
Query: 228 FGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGL 287
+ +H I + L V +A+I+++ K G+ A+ VF+ + D I W+++I G
Sbjct: 179 --RMLHCGI-IKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGF 235
Query: 288 AMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQ 347
A N AL+LF M + T +++ AC+ L++ G+ +A + +
Sbjct: 236 AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM---QAHVHIVKYDQD 292
Query: 348 MQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNA 389
+ +VDMY + G LE+A +M E + W +++
Sbjct: 293 LILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISG 333
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 288 bits (736), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 161/452 (35%), Positives = 259/452 (57%), Gaps = 8/452 (1%)
Query: 12 TFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSV 71
T T + AC L + +IHA+VI G DI + NSL Y+ A ++F+ +
Sbjct: 299 TLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM 358
Query: 72 VFPDVVSWTTIISGLSKCGFHKEAIDMFCGID---VKPNANTLVSVLSACSSLVSHKLGK 128
D+VSWTT+ISG +AID + +D VKP+ T+ +VLSAC++L G
Sbjct: 359 ERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGV 418
Query: 129 AIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERG 188
+H +++ + +I+ N +++ Y +C + +F +P++NV+SWT++I G
Sbjct: 419 ELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNN 478
Query: 189 FCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLV 248
C EA+ ++M+ T +PN TL L+AC+ I AL GK +H+++ R + + + +
Sbjct: 479 RCFEALIFLRQMKMT--LQPNAITLTAALAACARIGALMCGKEIHAHV-LRTGVGLDDFL 535
Query: 249 GNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAV 308
NA+++MYV+CG + A FN KD SW+ +++G + G G ++LF M+ + V
Sbjct: 536 PNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRV 594
Query: 309 FPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAE 368
PD++TFI+L+ CS +V QGL+ F M Y + P ++HYACVVD+ GRAG L+EA
Sbjct: 595 RPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAH 653
Query: 369 AFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGAD 428
FI++MP+ + +VWGALLNACRIH ++ + Q + SVG + L+ N +A
Sbjct: 654 KFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCG 713
Query: 429 RWEDTNKIRDEIRRMGLKKKTGCSWIEVNPSI 460
+W + K+R ++ GL GCSW+EV +
Sbjct: 714 KWREVAKVRRMMKENGLTVDAGCSWVEVKGKV 745
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 164/296 (55%), Gaps = 5/296 (1%)
Query: 11 YTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNS 70
YTF L+ C + E+H HV+ YG+ DI + N+L+ YV D+ SA +F+
Sbjct: 197 YTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDR 256
Query: 71 VVFPDVVSWTTIISGLSKCGFHKEAIDMFC---GIDVKPNANTLVSVLSACSSLVSHKLG 127
+ D++SW +ISG + G E +++F G+ V P+ TL SV+SAC L +LG
Sbjct: 257 MPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLG 316
Query: 128 KAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAER 187
+ IHA+ + +I + N++ Y+ GS LF +M ++++VSWTTMI GY
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYN 376
Query: 188 GFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNL 247
+A+ ++ M++ +P+E T+ VLSAC+++ L G +H ++ + L +
Sbjct: 377 FLPDKAIDTYRMMDQ-DSVKPDEITVAAVLSACATLGDLDTGVELHK-LAIKARLISYVI 434
Query: 248 VGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLM 303
V N +INMY KC + A+ +F+ + K+ ISW+++I+GL +N +AL M
Sbjct: 435 VANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 201/390 (51%), Gaps = 18/390 (4%)
Query: 13 FTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSVV 72
F ++ C ++ ++++ + + + N+ L +V ++ A +F +
Sbjct: 97 FVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMS 156
Query: 73 FPDVVSWTTIISGLSKCGFHKEAIDMFCGI----DVKPNANTLVSVLSACSSLVSHKLGK 128
++ SW ++ G +K G+ EA+ ++ + VKP+ T VL C + GK
Sbjct: 157 ERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGK 216
Query: 129 AIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERG 188
+H H +R E +I + NA++ Y++CG + S LF +MP+R+++SW MI GY E G
Sbjct: 217 EVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENG 276
Query: 189 FCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSY-ISTRYDLSVSNL 247
C E + +F M + +P+ TL +V+SAC + G+ +H+Y I+T + + +S
Sbjct: 277 MCHEGLELFFAM-RGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS-- 333
Query: 248 VGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINA 307
V N++ MY+ G A ++F+ + KD +SW+T+ISG N +A+ + +M ++
Sbjct: 334 VCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDS 393
Query: 308 VFPDDVTFIALISACSHGGLVDQGLIL----FKAMSTVYEIVPQMQHYACVVDMYGRAGL 363
V PD++T A++SAC+ G +D G+ L KA Y IV +++MY +
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN-----LINMYSKCKC 448
Query: 364 LEEAEAFIREMPIEAEWSVWGALLNACRIH 393
+++A +P + S W +++ R++
Sbjct: 449 IDKALDIFHNIPRKNVIS-WTSIIAGLRLN 477
Score = 138 bits (348), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 150/295 (50%), Gaps = 5/295 (1%)
Query: 83 ISGLSKCGFHKEAIDMFCGID---VKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLN 139
+ GL G +EA+ + + V + + V+++ C + + G +++ +L +++
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 140 ENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQE 199
+ L NA L ++R G+L Y+F KM +RN+ SW ++GGYA++G+ EA+ ++
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 200 MEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKC 259
M +P+ T VL C I L+ GK VH ++ RY + V NA+I MYVKC
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHV-VRYGYELDIDVVNALITMYVKC 244
Query: 260 GDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALI 319
GDV A +F+ + +D ISW+ +ISG NG + L+LF M +V PD +T ++I
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 320 SACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREM 374
SAC G G + + T V + + MY AG EAE M
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAV-DISVCNSLTQMYLNAGSWREAEKLFSRM 358
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 286 bits (732), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 158/496 (31%), Positives = 265/496 (53%), Gaps = 50/496 (10%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
++ T L C+ H ++H + + ++F+ N L+ Y + A+ +F
Sbjct: 228 DNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVF 287
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGID------------------------- 103
+++ DVVSW +++G S+ G ++A+ +F +
Sbjct: 288 SNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGY 347
Query: 104 -------------VKPNANTLVSVLSACSSLVSHKLGKAIHAHSLR---NLNEN-----N 142
+KPN TL+SVLS C+S+ + GK IH ++++ +L +N N
Sbjct: 348 EALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDEN 407
Query: 143 IILDNAILDFYIRCGSLASCGYLFVKM-PK-RNVVSWTTMIGGYAERGFCKEAVSVFQEM 200
+++ N ++D Y +C + + +F + PK R+VV+WT MIGGY++ G +A+ + EM
Sbjct: 408 MVI-NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Query: 201 -EKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKC 259
E+ + PN T+ L AC+S++AL GK +H+Y +V V N +I+MY KC
Sbjct: 467 FEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKC 526
Query: 260 GDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALI 319
G + A VF+ + K++++W+++++G M+G G +AL +F M D VT + ++
Sbjct: 527 GSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVL 586
Query: 320 SACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAE 379
ACSH G++DQG+ F M TV+ + P +HYAC+VD+ GRAG L A I EMP+E
Sbjct: 587 YACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPP 646
Query: 380 WSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGADRWEDTNKIRDE 439
VW A L+ CRIH E+ + + + G++ L+SN +A A RW+D +IR
Sbjct: 647 PVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSL 706
Query: 440 IRRMGLKKKTGCSWIE 455
+R G+KK+ GCSW+E
Sbjct: 707 MRHKGVKKRPGCSWVE 722
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 157/312 (50%), Gaps = 7/312 (2%)
Query: 32 IHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSVVFPD--VVSWTTIISGLSKC 89
IH ++ +G L + + + L+ Y++V + A + D V W ++I
Sbjct: 47 IHQKLLSFGIL-TLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDN 105
Query: 90 GFHKEAIDMFC---GIDVKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILD 146
G + + +F + P+ T V AC + S + G++ HA SL +N+ +
Sbjct: 106 GCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVG 165
Query: 147 NAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEA 206
NA++ Y RC SL+ +F +M +VVSW ++I YA+ G K A+ +F M
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 207 EPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAI 266
P+ TLVNVL C+S+ S GK +H + T ++ + VGN +++MY KCG + A
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS-EMIQNMFVGNCLVDMYAKCGMMDEAN 284
Query: 267 QVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGG 326
VF+ ++ KD +SW+ +++G + G A++LF M + D VT+ A IS + G
Sbjct: 285 TVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRG 344
Query: 327 LVDQGLILFKAM 338
L + L + + M
Sbjct: 345 LGYEALGVCRQM 356
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 151/307 (49%), Gaps = 17/307 (5%)
Query: 1 MLSCPSSYNHYTFTQALKACSLAHPHQKALEIHAHVIEY-------GHLHDIFIQNSLLH 53
MLS N T L C+ EIH + I+Y GH + + N L+
Sbjct: 356 MLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLID 415
Query: 54 FYVTVKDIFSAHQIFNSVVFP--DVVSWTTIISGLSKCGFHKEAIDMFCGI-----DVKP 106
Y K + +A +F+S+ DVV+WT +I G S+ G +A+++ + +P
Sbjct: 416 MYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRP 475
Query: 107 NANTLVSVLSACSSLVSHKLGKAIHAHSLRN-LNENNIILDNAILDFYIRCGSLASCGYL 165
NA T+ L AC+SL + ++GK IHA++LRN N + + N ++D Y +CGS++ +
Sbjct: 476 NAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLV 535
Query: 166 FVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISA 225
F M +N V+WT+++ GY G+ +EA+ +F EM + + + TL+ VL ACS
Sbjct: 536 FDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG-FKLDGVTLLVVLYACSHSGM 594
Query: 226 LSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVF-NMLAYKDKISWSTVI 284
+ G + + T + +S ++++ + G + A+++ M + W +
Sbjct: 595 IDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFL 654
Query: 285 SGLAMNG 291
S ++G
Sbjct: 655 SCCRIHG 661
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 283 bits (725), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 149/493 (30%), Positives = 271/493 (54%), Gaps = 44/493 (8%)
Query: 4 CPSSYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFY-------- 55
CP +H F LK+C++ + +H ++ G D++ N+L++ Y
Sbjct: 102 CP---DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGS 158
Query: 56 -VTVKDIF---------------------------SAHQIFNSVVFPDVVSWTTIISGLS 87
++V ++F S ++F + DVVS+ TII+G +
Sbjct: 159 KISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYA 218
Query: 88 KCGFHKEAIDM---FCGIDVKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNII 144
+ G +++A+ M D+KP++ TL SVL S V GK IH + +R ++++
Sbjct: 219 QSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVY 278
Query: 145 LDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTK 204
+ ++++D Y + + +F ++ R+ +SW +++ GY + G EA+ +F++M T
Sbjct: 279 IGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM-VTA 337
Query: 205 EAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGI 264
+ +P +V+ AC+ ++ L GK +H Y+ R + + +A+++MY KCG++
Sbjct: 338 KVKPGAVAFSSVIPACAHLATLHLGKQLHGYV-LRGGFGSNIFIASALVDMYSKCGNIKA 396
Query: 265 AIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSH 324
A ++F+ + D++SW+ +I G A++G G +A+ LF M V P+ V F+A+++ACSH
Sbjct: 397 ARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSH 456
Query: 325 GGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWG 384
GLVD+ F +M+ VY + +++HYA V D+ GRAG LEEA FI +M +E SVW
Sbjct: 457 VGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWS 516
Query: 385 ALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGADRWEDTNKIRDEIRRMG 444
LL++C +H+N E+ +++ + + ++G + LM N +A RW++ K+R +R+ G
Sbjct: 517 TLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKG 576
Query: 445 LKKKTGCSWIEVN 457
L+KK CSWIE+
Sbjct: 577 LRKKPACSWIEMK 589
Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 174/370 (47%), Gaps = 53/370 (14%)
Query: 68 FNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGIDVK---PNANTLVSVLSACSSLVSH 124
F ++ P V++W ++I + +A+ F + P+ N SVL +C+ ++
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 125 KLGKAIHAHSLRNLNENNIILDNAILDFYIRC---GSLASCGYLFVKMPKR--------- 172
+ G+++H +R + ++ NA+++ Y + GS S G +F +MP+R
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 173 ------------------------NVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEP 208
+VVS+ T+I GYA+ G ++A+ + +EM T + +P
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM-GTTDLKP 240
Query: 209 NEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQV 268
+ TL +VL S + GK +H Y+ R + +G+++++MY K + + +V
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYV-IRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 269 FNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLV 328
F+ L +D ISW+++++G NG +AL+LF M+ V P V F ++I AC+H +
Sbjct: 300 FSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATL 359
Query: 329 D-----QGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVW 383
G +L + I + +VDMY + G ++ A M + E S W
Sbjct: 360 HLGKQLHGYVLRGGFGSNIFIA------SALVDMYSKCGNIKAARKIFDRMNVLDEVS-W 412
Query: 384 GALLNACRIH 393
A++ +H
Sbjct: 413 TAIIMGHALH 422
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 122/291 (41%), Gaps = 50/291 (17%)
Query: 119 SSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWT 178
+ + S K +HA +R + ++ + ++ Y L LF + V++W
Sbjct: 16 TRIKSKSQAKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLHEALLLFKTLKSPPVLAWK 74
Query: 179 TMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYIST 238
++I + ++ +A++ F EM + P+ +VL +C+ + L FG+ VH +I
Sbjct: 75 SVIRCFTDQSLFSKALASFVEMRASGRC-PDHNVFPSVLKSCTMMMDLRFGESVHGFI-V 132
Query: 239 RYDLSVSNLVGNAVINMYVKCGDVGIAI-------------------------------- 266
R + GNA++NMY K +G I
Sbjct: 133 RLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGI 192
Query: 267 ----QVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISAC 322
+VF ++ KD +S++T+I+G A +G AL++ M + PD T +++
Sbjct: 193 DSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIF 252
Query: 323 SH-----GGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAE 368
S G G ++ K + + I + +VDMY ++ +E++E
Sbjct: 253 SEYVDVIKGKEIHGYVIRKGIDSDVYI------GSSLVDMYAKSARIEDSE 297
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 283 bits (725), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/482 (34%), Positives = 254/482 (52%), Gaps = 57/482 (11%)
Query: 31 EIHAHVIEYGHLHDIFIQNSLLHFYVTV----KDIFSAHQIFNSVVFPDVVSWTTIISGL 86
+IHA I+ G + D +L F T +D+ AH+IFN + + SW TII G
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 87 SKCGFHKEAI------DMFCGIDVKPNANTLVSVLSACSSLVSHKLGKAIHAHSL----- 135
S+ K I +M V+PN T SVL AC+ + GK IH +L
Sbjct: 101 SESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFG 160
Query: 136 ----------------------------------------RNLNENNIILDNAILDFYIR 155
R + I+L N ++D Y+R
Sbjct: 161 GDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMR 220
Query: 156 CGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVN 215
G + LF KM +R+VVSW TMI GY+ GF K+AV VF+EM+K + PN TLV+
Sbjct: 221 LGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG-DIRPNYVTLVS 279
Query: 216 VLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYK 275
VL A S + +L G+++H Y + + + +++G+A+I+MY KCG + AI VF L +
Sbjct: 280 VLPAISRLGSLELGEWLHLY-AEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE 338
Query: 276 DKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILF 335
+ I+WS +I+G A++G A+ F M V P DV +I L++ACSHGGLV++G F
Sbjct: 339 NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYF 398
Query: 336 KAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIHRN 395
M +V + P+++HY C+VD+ GR+GLL+EAE FI MPI+ + +W ALL ACR+ N
Sbjct: 399 SQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGN 458
Query: 396 DEMFDRIRQDLVNKKGVSVGTFALMSNTFAGADRWEDTNKIRDEIRRMGLKKKTGCSWIE 455
EM R+ L++ G + +SN +A W + +++R ++ ++K GCS I+
Sbjct: 459 VEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLID 518
Query: 456 VN 457
++
Sbjct: 519 ID 520
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 176/405 (43%), Gaps = 91/405 (22%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYV------------ 56
N +TF LKAC+ Q+ +IH ++YG D F+ ++L+ YV
Sbjct: 127 NRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLF 186
Query: 57 ---------------------------------TVKDIFSAHQIFNSVVFPDVVSWTTII 83
+ D +A +F+ + VVSW T+I
Sbjct: 187 YKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMI 246
Query: 84 SGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNE 140
SG S GF K+A+++F + D++PN TLVSVL A S L S +LG+ +H ++ +
Sbjct: 247 SGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIR 306
Query: 141 NNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEM 200
+ +L +A++D Y +CG + ++F ++P+ NV++W+ MI G+A G +A+ F +M
Sbjct: 307 IDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM 366
Query: 201 EKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCG 260
+ P++ +N+L+ACS + G+ RY
Sbjct: 367 RQAG-VRPSDVAYINLLTACSHGGLVEEGR--------RY-------------------- 397
Query: 261 DVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQAL--QLFSLMIINAVFPDDVTFIAL 318
F+ + D + G ++ GR L + ++ + PDDV + AL
Sbjct: 398 --------FSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKAL 449
Query: 319 ISACSHGGLVDQGLILFKAMSTVYEIVPQMQ-HYACVVDMYGRAG 362
+ AC G V+ G + + + ++VP Y + +MY G
Sbjct: 450 LGACRMQGNVEMGK---RVANILMDMVPHDSGAYVALSNMYASQG 491
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 281 bits (720), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 158/464 (34%), Positives = 265/464 (57%), Gaps = 27/464 (5%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFY-----VTVKDIFS 63
+++T+ LKACS +H H+ + G DI++ N+L+ Y + V+D
Sbjct: 116 DNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRD--- 172
Query: 64 AHQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGIDVKPNA-----NTLVSVLSAC 118
A ++F + D VSW +++ GL K G ++A +F D P NT++ + C
Sbjct: 173 AMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLF---DEMPQRDLISWNTMLDGYARC 229
Query: 119 SSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMP--KRNVVS 176
++ KA + E N + + ++ Y + G + +F KMP +NVV+
Sbjct: 230 -----REMSKAFEL--FEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVT 282
Query: 177 WTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYI 236
WT +I GYAE+G KEA + +M + + + A ++++L+AC+ LS G +HS I
Sbjct: 283 WTIIIAGYAEKGLLKEADRLVDQMVASG-LKFDAAAVISILAACTESGLLSLGMRIHS-I 340
Query: 237 STRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQA 296
R +L + V NA+++MY KCG++ A VFN + KD +SW+T++ GL ++G G++A
Sbjct: 341 LKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEA 400
Query: 297 LQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVD 356
++LFS M + PD VTFIA++ +C+H GL+D+G+ F +M VY++VPQ++HY C+VD
Sbjct: 401 IELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVD 460
Query: 357 MYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGT 416
+ GR G L+EA ++ MP+E +WGALL ACR+H ++ + +LV G
Sbjct: 461 LLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGN 520
Query: 417 FALMSNTFAGADRWEDTNKIRDEIRRMGLKKKTGCSWIEVNPSI 460
++L+SN +A A+ WE IR +++ MG++K +G S +E+ I
Sbjct: 521 YSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGI 564
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 188/400 (47%), Gaps = 35/400 (8%)
Query: 31 EIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSVVFPDVVSWTTIISGLSKCG 90
++HA +I D+ I L+ + A ++FN V P+V ++I ++
Sbjct: 37 QLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNS 96
Query: 91 FHKEAIDMFCGID---VKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILDN 147
+A +F + + + T +L ACS + K +H H + ++I + N
Sbjct: 97 QPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPN 156
Query: 148 AILDFYIRCGSLA--SCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKE 205
A++D Y RCG L LF KM +R+ VSW +M+GG + G ++A +F EM +
Sbjct: 157 ALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDL 216
Query: 206 AEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIA 265
N T+++ + C +S +F + + R +S S +V Y K GD+ +A
Sbjct: 217 ISWN--TMLDGYARCREMSK-AFELF--EKMPERNTVSWSTMVMG-----YSKAGDMEMA 266
Query: 266 IQVFNM--LAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACS 323
+F+ L K+ ++W+ +I+G A G ++A +L M+ + + D I++++AC+
Sbjct: 267 RVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACT 326
Query: 324 HGGLVDQGLILFKAM------STVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIE 377
GL+ G+ + + S Y + ++DMY + G L++A ++P +
Sbjct: 327 ESGLLSLGMRIHSILKRSNLGSNAYVL-------NALLDMYAKCGNLKKAFDVFNDIP-K 378
Query: 378 AEWSVWGALLNACRIHRND----EMFDRIRQDLVNKKGVS 413
+ W +L+ +H + E+F R+R++ + V+
Sbjct: 379 KDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVT 418
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 33/209 (15%)
Query: 217 LSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKD 276
L C++++ + K +H+ I R +L + +I+ C +A++VFN + +
Sbjct: 26 LPKCANLNQV---KQLHAQI-IRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPN 81
Query: 277 KISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACS-----------HG 325
+++I A N QA +FS M +F D+ T+ L+ ACS H
Sbjct: 82 VHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHN 141
Query: 326 GLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLL--EEAEAFIREMPIE--AEW- 380
+ GL S +Y VP ++D Y R G L +A +M W
Sbjct: 142 HIEKLGL-----SSDIY--VPN-----ALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 189
Query: 381 SVWGALLNACRIHRNDEMFDRIRQ-DLVN 408
S+ G L+ A + +FD + Q DL++
Sbjct: 190 SMLGGLVKAGELRDARRLFDEMPQRDLIS 218
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 279 bits (713), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 153/453 (33%), Positives = 250/453 (55%), Gaps = 5/453 (1%)
Query: 12 TFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSV 71
T L AC+ A + + IH++ I++G ++F+ N L+ Y + ++F+ +
Sbjct: 249 TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM 308
Query: 72 VFPDVVSWTTIISGLSKCGFHKEAIDMFCGID---VKPNANTLVSVLSACSSLVSHKLGK 128
D++SW +II AI +F + ++P+ TL+S+ S S L + +
Sbjct: 309 YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACR 368
Query: 129 AIHAHSLRN-LNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAER 187
++ +LR +I + NA++ Y + G + S +F +P +V+SW T+I GYA+
Sbjct: 369 SVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQN 428
Query: 188 GFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNL 247
GF EA+ ++ ME+ E N+ T V+VL ACS AL G +H + + L +
Sbjct: 429 GFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL-LKNGLYLDVF 487
Query: 248 VGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINA 307
V ++ +MY KCG + A+ +F + + + W+T+I+ +G G +A+ LF M+
Sbjct: 488 VVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG 547
Query: 308 VFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEA 367
V PD +TF+ L+SACSH GLVD+G F+ M T Y I P ++HY C+VDMYGRAG LE A
Sbjct: 548 VKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETA 607
Query: 368 EAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGA 427
FI+ M ++ + S+WGALL+ACR+H N ++ + L + VG L+SN +A A
Sbjct: 608 LKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASA 667
Query: 428 DRWEDTNKIRDEIRRMGLKKKTGCSWIEVNPSI 460
+WE ++IR GL+K G S +EV+ +
Sbjct: 668 GKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKV 700
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 203/378 (53%), Gaps = 11/378 (2%)
Query: 1 MLSCPSSYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKD 60
MLS + ++ TF LKAC K IH +++G + D+++ SL+H Y K
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTVIDGNK---IHCLALKFGFMWDVYVAASLIHLYSRYKA 200
Query: 61 IFSAHQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGIDVKPNANTLVSVLSACSS 120
+ +A +F+ + D+ SW +ISG + G KEA+ + G+ ++ T+VS+LSAC+
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM-DSVTVVSLLSACTE 259
Query: 121 LVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTM 180
G IH++S+++ E+ + + N ++D Y G L C +F +M R+++SW ++
Sbjct: 260 AGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSI 319
Query: 181 IGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRY 240
I Y A+S+FQEM ++ +P+ TL+++ S S + + + V + +
Sbjct: 320 IKAYELNEQPLRAISLFQEMRLSR-IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKG 378
Query: 241 DLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLF 300
+GNAV+ MY K G V A VFN L D ISW+T+ISG A NG +A++++
Sbjct: 379 WFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMY 438
Query: 301 SLMIINA-VFPDDVTFIALISACSHGGLVDQGLILFKAM--STVYEIVPQMQHYACVVDM 357
++M + + T+++++ ACS G + QG+ L + + +Y V + A DM
Sbjct: 439 NIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLA---DM 495
Query: 358 YGRAGLLEEAEAFIREMP 375
YG+ G LE+A + ++P
Sbjct: 496 YGKCGRLEDALSLFYQIP 513
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 173/358 (48%), Gaps = 23/358 (6%)
Query: 27 QKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSVVFPDVVSWTTIISGL 86
Q A +HA ++ + ++ I L++ Y + ++ A F+ + DV +W +ISG
Sbjct: 68 QSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGY 127
Query: 87 SKCGFHKEAIDMFC----GIDVKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENN 142
+ G E I F + P+ T SVL AC +++ G IH +L+ +
Sbjct: 128 GRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWD 184
Query: 143 IILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEK 202
+ + +++ Y R ++ + LF +MP R++ SW MI GY + G KEA+++ +
Sbjct: 185 VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA 244
Query: 203 TKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDV 262
+ T+V++LSAC+ + G +HSY S ++ L V N +I++Y + G +
Sbjct: 245 M-----DSVTVVSLLSACTEAGDFNRGVTIHSY-SIKHGLESELFVSNKLIDLYAEFGRL 298
Query: 263 GIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISAC 322
+VF+ + +D ISW+++I +N +A+ LF M ++ + PD +T I+L S
Sbjct: 299 RDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASIL 358
Query: 323 SHGGLVD-----QGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMP 375
S G + QG L K + + VV MY + GL++ A A +P
Sbjct: 359 SQLGDIRACRSVQGFTLRKGW-----FLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 138/295 (46%), Gaps = 17/295 (5%)
Query: 113 SVLSACSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKR 172
++ C++L S K +HA + + N+ + +++ Y G++A + F + R
Sbjct: 59 TLFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 173 NVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYV 232
+V +W MI GY G E + F + P+ T +VL AC ++ G +
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKI 172
Query: 233 HSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGC 292
H ++ ++ V ++I++Y + VG A +F+ + +D SW+ +ISG +G
Sbjct: 173 HC-LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGN 231
Query: 293 GRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYA 352
++AL L + + D VT ++L+SAC+ G ++G+ + + S + + ++
Sbjct: 232 AKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTI-HSYSIKHGLESELFVSN 286
Query: 353 CVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIH----RNDEMFDRIR 403
++D+Y G L + + M + S W +++ A ++ R +F +R
Sbjct: 287 KLIDLYAEFGRLRDCQKVFDRMYVRDLIS-WNSIIKAYELNEQPLRAISLFQEMR 340
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
N T+ L ACS A ++ +++H +++ G D+F+ SL Y + A +F
Sbjct: 450 NQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLF 509
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSACS 119
+ + V W T+I+ G ++A+ +F + VKP+ T V++LSACS
Sbjct: 510 YQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS 563
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 278 bits (710), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 149/457 (32%), Positives = 268/457 (58%), Gaps = 12/457 (2%)
Query: 14 TQALKACSLAHPHQKALE-IHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSVV 72
+ A +A A P K L+ +HAH+I G+ + L+ + + I H +F SV
Sbjct: 9 SAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVP 68
Query: 73 FPDVVSWTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSACSSLVSHKLGKA 129
PD + ++I SK + + + +V P+ T SV+ +C+ L + ++GK
Sbjct: 69 LPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKG 128
Query: 130 IHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGF 189
+H H++ + + + A++ FY +CG + +F +MP++++V+W +++ G+ + G
Sbjct: 129 VHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGL 188
Query: 190 CKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYI-STRYDLSVSNLV 248
EA+ VF +M ++ EP+ AT V++LSAC+ A+S G +VH YI S DL+V +
Sbjct: 189 ADEAIQVFYQMRESG-FEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVK--L 245
Query: 249 GNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIIN-A 307
G A+IN+Y +CGDVG A +VF+ + + +W+ +IS +G G+QA++LF+ M +
Sbjct: 246 GTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCG 305
Query: 308 VFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEA 367
P++VTF+A++SAC+H GLV++G ++K M+ Y ++P ++H+ C+VDM GRAG L+EA
Sbjct: 306 PIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEA 365
Query: 368 EAFIREMPIEAEWS---VWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTF 424
FI ++ + + +W A+L AC++HRN ++ I + L+ + + G ++SN +
Sbjct: 366 YKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIY 425
Query: 425 AGADRWEDTNKIRDEIRRMGLKKKTGCSWIEVNPSIF 461
A + + ++ + IRD + R L+K+ G S IEV +
Sbjct: 426 ALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTY 462
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 131/245 (53%), Gaps = 3/245 (1%)
Query: 1 MLSCPSSYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKD 60
MLS S ++YTFT +K+C+ + +H H + G D ++Q +L+ FY D
Sbjct: 98 MLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGD 157
Query: 61 IFSAHQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSA 117
+ A Q+F+ + +V+W +++SG + G EAI +F + +P++ T VS+LSA
Sbjct: 158 MEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSA 217
Query: 118 CSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSW 177
C+ + LG +H + + + N+ L A+++ Y RCG + +F KM + NV +W
Sbjct: 218 CAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAW 277
Query: 178 TTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYIS 237
T MI Y G+ ++AV +F +ME PN T V VLSAC+ + G+ V+ ++
Sbjct: 278 TAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMT 337
Query: 238 TRYDL 242
Y L
Sbjct: 338 KSYRL 342
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 278 bits (710), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 143/463 (30%), Positives = 263/463 (56%), Gaps = 17/463 (3%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHL-HDIFIQNSLLHFYVTVKDIFSAHQI 67
+ +T + L ACS + E+HA+ ++ G L + F+ ++L+ Y K + S ++
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 68 FNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGID----VKPNANTLVSVLSACSSLVS 123
F+ + + W +I+G S+ KEA+ +F G++ + N+ T+ V+ AC +
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 124 HKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGG 183
+AIH ++ + + + N ++D Y R G + +F KM R++V+W TMI G
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480
Query: 184 YAERGFCKEAVSVFQEMEKTKEA----------EPNEATLVNVLSACSSISALSFGKYVH 233
Y ++A+ + +M+ + +PN TL+ +L +C+++SAL+ GK +H
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 234 SYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCG 293
+Y + + +L+ VG+A+++MY KCG + ++ +VF+ + K+ I+W+ +I M+G G
Sbjct: 541 AY-AIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599
Query: 294 RQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYAC 353
++A+ L +M++ V P++VTFI++ +ACSH G+VD+GL +F M Y + P HYAC
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 659
Query: 354 VVDMYGRAGLLEEAEAFIREMPIE-AEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGV 412
VVD+ GRAG ++EA + MP + + W +LL A RIH N E+ + Q+L+ +
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN 719
Query: 413 SVGTFALMSNTFAGADRWEDTNKIRDEIRRMGLKKKTGCSWIE 455
+ L++N ++ A W+ ++R ++ G++K+ GCSWIE
Sbjct: 720 VASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIE 762
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 178/328 (54%), Gaps = 14/328 (4%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHD-IFIQNSLLHFYVTVKDIFSAHQI 67
++Y F LKA + + +IHAHV ++G+ D + + N+L++ Y D + +++
Sbjct: 96 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 155
Query: 68 FNSVVFPDVVSWTTIISGLSKCGFHK--EAIDMF-CGID--VKPNANTLVSVLSACSSLV 122
F+ + + VSW ++IS L C F K A++ F C +D V+P++ TLVSV++ACS+L
Sbjct: 156 FDRISERNQVSWNSLISSL--CSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 213
Query: 123 SHK---LGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTT 179
+ +GK +HA+ LR N+ I+ N ++ Y + G LAS L R++V+W T
Sbjct: 214 MPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNT 272
Query: 180 MIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTR 239
++ + EA+ +EM + EP+E T+ +VL ACS + L GK +H+Y
Sbjct: 273 VLSSLCQNEQLLEALEYLREM-VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 331
Query: 240 YDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQL 299
L ++ VG+A+++MY C V +VF+ + + W+ +I+G + N ++AL L
Sbjct: 332 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLL 391
Query: 300 FSLMIINA-VFPDDVTFIALISACSHGG 326
F M +A + + T ++ AC G
Sbjct: 392 FIGMEESAGLLANSTTMAGVVPACVRSG 419
Score = 112 bits (279), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 135/261 (51%), Gaps = 12/261 (4%)
Query: 79 WTTIISGLSKCGFHKEAI----DMFCGIDVKPNANTLVSVLSACSSLVSHKLGKAIHAHS 134
W ++ + +EA+ DM + +KP+ ++L A + L +LGK IHAH
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIV-LGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 135 LR-NLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEA 193
+ +++ + N +++ Y +CG + +F ++ +RN VSW ++I + A
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 194 VSVFQEMEKTKEAEPNEATLVNVLSACSSI---SALSFGKYVHSYISTRYDLSVSNLVGN 250
+ F+ M + EP+ TLV+V++ACS++ L GK VH+Y + +L ++ + N
Sbjct: 184 LEAFRCM-LDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL--NSFIIN 240
Query: 251 AVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFP 310
++ MY K G + + + +D ++W+TV+S L N +AL+ M++ V P
Sbjct: 241 TLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300
Query: 311 DDVTFIALISACSHGGLVDQG 331
D+ T +++ ACSH ++ G
Sbjct: 301 DEFTISSVLPACSHLEMLRTG 321
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 101/198 (51%), Gaps = 6/198 (3%)
Query: 177 WTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYI 236
W ++ +EAV + +M +P+ +L A + + + GK +H+++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDM-IVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 237 STRYDLSVSNL-VGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQ 295
++ V ++ V N ++N+Y KCGD G +VF+ ++ ++++SW+++IS L
Sbjct: 124 -YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEM 182
Query: 296 ALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYA--C 353
AL+ F M+ V P T +++++ACS+ + +GL++ K + ++ +
Sbjct: 183 ALEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLMMGKQVHAYGLRKGELNSFIINT 241
Query: 354 VVDMYGRAGLLEEAEAFI 371
+V MYG+ G L ++ +
Sbjct: 242 LVAMYGKLGKLASSKVLL 259
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 250/456 (54%), Gaps = 5/456 (1%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
+ T + AC+ + +H VI G +D+ + NSLL+ Y + A +F
Sbjct: 162 DRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF 221
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSACSSLVSHK 125
+ DV+SW+T+I+ + G EA+ +F + +PN T++ VL AC++ +
Sbjct: 222 KMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLE 281
Query: 126 LGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYA 185
G+ H ++R E + + A++D Y++C S +F ++P+++VVSW +I G+
Sbjct: 282 QGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFT 341
Query: 186 ERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVS 245
G ++ F M P+ +V VL +CS + L K HSY+ +Y +
Sbjct: 342 LNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYV-IKYGFDSN 400
Query: 246 NLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMII 305
+G +++ +Y +CG +G A +VFN +A KD + W+++I+G ++G G +AL+ F+ M+
Sbjct: 401 PFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVK 460
Query: 306 NA-VFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLL 364
++ V P++VTF++++SACSH GL+ +GL +FK M Y + P ++HYA +VD+ GR G L
Sbjct: 461 SSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDL 520
Query: 365 EEAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTF 424
+ A + MP + G LL ACRIH+N EM + + + L + G + LMSN +
Sbjct: 521 DTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVY 580
Query: 425 AGADRWEDTNKIRDEIRRMGLKKKTGCSWIEVNPSI 460
WE+ K+R+ +++ G+KK S IE+ +
Sbjct: 581 GVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKV 616
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 208/391 (53%), Gaps = 10/391 (2%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHL-HDIFIQNSLLHFYVTVKDIFSAHQI 67
+++T ALKAC IH V + L D+++ +SL++ Y+ + A ++
Sbjct: 59 DNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRM 118
Query: 68 FNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI----DVKPNANTLVSVLSACSSLVS 123
F+ + PD+V+W++++SG K G +A++ F + DV P+ TL++++SAC+ L +
Sbjct: 119 FDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSN 178
Query: 124 HKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGG 183
+LG+ +H +R N++ L N++L+ Y + + LF + +++V+SW+T+I
Sbjct: 179 SRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIAC 238
Query: 184 YAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLS 243
Y + G EA+ VF +M EPN AT++ VL AC++ L G+ H ++ R L
Sbjct: 239 YVQNGAAAEALLVFNDM-MDDGTEPNVATVLCVLQACAAAHDLEQGRKTHE-LAIRKGLE 296
Query: 244 VSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLM 303
V A+++MY+KC A VF+ + KD +SW +ISG +NG ++++ FS+M
Sbjct: 297 TEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIM 356
Query: 304 II-NAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAG 362
++ N PD + + ++ +CS G ++Q F + Y A +V++Y R G
Sbjct: 357 LLENNTRPDAILMVKVLGSCSELGFLEQAKC-FHSYVIKYGFDSNPFIGASLVELYSRCG 415
Query: 363 LLEEAEAFIREMPIEAEWSVWGALLNACRIH 393
L A + ++ + VW +L+ IH
Sbjct: 416 SLGNASKVFNGIALK-DTVVWTSLITGYGIH 445
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 179/352 (50%), Gaps = 27/352 (7%)
Query: 64 AHQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSACSS 120
A Q+F + + W T++ LS+ +E + F + + KP+ TL L AC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 121 LVSHKLGKAIHAHSLRNLN-ENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTT 179
L G+ IH +++ +++ + ++++ YI+CG + +F ++ K ++V+W++
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 180 MIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTR 239
M+ G+ + G +AV F+ M + P+ TL+ ++SAC+ +S G+ VH ++ R
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 240 ---YDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQA 296
DLS+ N+++N Y K A+ +F M+A KD ISWSTVI+ NG +A
Sbjct: 193 GFSNDLSLV----NSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEA 248
Query: 297 LQLFSLMIINAVFPDDVTFIALISACSHGGLVDQG-----LILFKAMSTVYEIVPQMQHY 351
L +F+ M+ + P+ T + ++ AC+ ++QG L + K + T +++
Sbjct: 249 LLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLET------EVKVS 302
Query: 352 ACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRI----HRNDEMF 399
+VDMY + EEA A +P + S W AL++ + HR+ E F
Sbjct: 303 TALVDMYMKCFSPEEAYAVFSRIPRKDVVS-WVALISGFTLNGMAHRSIEEF 353
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 276 bits (705), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 142/435 (32%), Positives = 248/435 (57%), Gaps = 6/435 (1%)
Query: 31 EIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSVVFPDVVSWTTIISGLSKCG 90
E+H + ++ +++ + N+ + Y + A ++F+ + V SW +I G ++
Sbjct: 416 ELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN 475
Query: 91 FHKEAIDMFCGIDVK---PNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILDN 147
+ ++D + + P++ T+ S+LSACS L S +LGK +H +RN E ++ +
Sbjct: 476 DPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL 535
Query: 148 AILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAE 207
++L YI CG L + LF M +++VSW T+I GY + GF A+ VF++M +
Sbjct: 536 SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM-VLYGIQ 594
Query: 208 PNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQ 267
+++ V ACS + +L G+ H+Y + ++ L + ++I+MY K G + + +
Sbjct: 595 LCGISMMPVFGACSLLPSLRLGREAHAY-ALKHLLEDDAFIACSLIDMYAKNGSITQSSK 653
Query: 268 VFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGL 327
VFN L K SW+ +I G ++G ++A++LF M PDD+TF+ +++AC+H GL
Sbjct: 654 VFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGL 713
Query: 328 VDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFI-REMPIEAEWSVWGAL 386
+ +GL M + + + P ++HYACV+DM GRAG L++A + EM EA+ +W +L
Sbjct: 714 IHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSL 773
Query: 387 LNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGADRWEDTNKIRDEIRRMGLK 446
L++CRIH+N EM +++ L + + L+SN +AG +WED K+R + M L+
Sbjct: 774 LSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLR 833
Query: 447 KKTGCSWIEVNPSIF 461
K GCSWIE+N +F
Sbjct: 834 KDAGCSWIELNRKVF 848
Score = 162 bits (409), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 169/323 (52%), Gaps = 9/323 (2%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
+H+T+ +KAC+ L +H V++ G + D+F+ N+L+ FY T + A Q+F
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI-------DVKPNANTLVSVLSACSSL 121
+ + ++VSW ++I S GF +E+ + + P+ TLV+VL C+
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 122 VSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMI 181
LGK +H +++ + ++L+NA++D Y +CG + + +F +NVVSW TM+
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365
Query: 182 GGYAERGFCKEAVSVFQEM-EKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRY 240
GG++ G V ++M ++ + +E T++N + C S L K +H Y S +
Sbjct: 366 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCY-SLKQ 424
Query: 241 DLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLF 300
+ + LV NA + Y KCG + A +VF+ + K SW+ +I G A + R +L
Sbjct: 425 EFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAH 484
Query: 301 SLMIINAVFPDDVTFIALISACS 323
M I+ + PD T +L+SACS
Sbjct: 485 LQMKISGLLPDSFTVCSLLSACS 507
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 143/289 (49%), Gaps = 20/289 (6%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
+ +T L ACS + E+H +I D+F+ S+L Y+ ++ + +F
Sbjct: 495 DSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALF 554
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMF----------CGIDVKPNANTLVSVLSAC 118
+++ +VSW T+I+G + GF A+ +F CGI + P V AC
Sbjct: 555 DAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMP-------VFGAC 607
Query: 119 SSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWT 178
S L S +LG+ HA++L++L E++ + +++D Y + GS+ +F + +++ SW
Sbjct: 608 SLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWN 667
Query: 179 TMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYIST 238
MI GY G KEA+ +F+EM++T P++ T + VL+AC+ + G + +
Sbjct: 668 AMIMGYGIHGLAKEAIKLFEEMQRTGH-NPDDLTFLGVLTACNHSGLIHEGLRYLDQMKS 726
Query: 239 RYDLSVSNLVGNAVINMYVKCGDVGIAIQVF--NMLAYKDKISWSTVIS 285
+ L + VI+M + G + A++V M D W +++S
Sbjct: 727 SFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 135/267 (50%), Gaps = 10/267 (3%)
Query: 67 IFNSVVFPDVVSWTTIISGLSKCGFHKEA----IDMFCGIDVKPNANTLVSVLSACSSLV 122
+F+++ ++ W +IS S+ + E I+M D+ P+ T V+ AC+ +
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 123 SHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIG 182
+G A+H ++ ++ + NA++ FY G + LF MP+RN+VSW +MI
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 183 GYAERGFCKEAVSVFQE-MEKTKEAE--PNEATLVNVLSACSSISALSFGKYVHSYISTR 239
+++ GF +E+ + E ME+ + P+ ATLV VL C+ + GK VH + + +
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGW-AVK 320
Query: 240 YDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQL 299
L ++ NA+++MY KCG + A +F M K+ +SW+T++ G + G +
Sbjct: 321 LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDV 380
Query: 300 FSLMIINA--VFPDDVTFIALISACSH 324
M+ V D+VT + + C H
Sbjct: 381 LRQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 138/316 (43%), Gaps = 13/316 (4%)
Query: 114 VLSACSSLVSHKLGKAIH---AHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMP 170
+L A ++G+ IH + S R N++ +L I+ Y CGS ++F +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDD--VLCTRIITMYAMCGSPDDSRFVFDALR 147
Query: 171 KRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGK 230
+N+ W +I Y+ E + F EM T + P+ T V+ AC+ +S + G
Sbjct: 148 SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGL 207
Query: 231 YVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMN 290
VH + + L VGNA+++ Y G V A+Q+F+++ ++ +SW+++I + N
Sbjct: 208 AVHGLV-VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDN 266
Query: 291 GCGRQALQLFSLMI----INAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVP 346
G ++ L M+ A PD T + ++ C+ + G + + +
Sbjct: 267 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGV-HGWAVKLRLDK 325
Query: 347 QMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIHRNDE-MFDRIRQD 405
++ ++DMY + G + A+ I +M W ++ + FD +RQ
Sbjct: 326 ELVLNNALMDMYSKCGCITNAQ-MIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 406 LVNKKGVSVGTFALMS 421
L + V +++
Sbjct: 385 LAGGEDVKADEVTILN 400
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 274 bits (701), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 149/450 (33%), Positives = 256/450 (56%), Gaps = 7/450 (1%)
Query: 11 YTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNS 70
+ + L AC + +HAH+I+ +L +++ LL FY + A ++ +
Sbjct: 53 HGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE 112
Query: 71 VVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSACSSLVSHKLG 127
+ +VVSWT +IS S+ G EA+ +F + D KPN T +VL++C LG
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 128 KAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAER 187
K IH ++ +++I + +++LD Y + G + +F +P+R+VVS T +I GYA+
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 188 GFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNL 247
G +EA+ +F + ++ PN T ++L+A S ++ L GK H ++ R +L +
Sbjct: 233 GLDEEALEMFHRLH-SEGMSPNYVTYASLLTALSGLALLDHGKQAHCHV-LRRELPFYAV 290
Query: 248 VGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINA 307
+ N++I+MY KCG++ A ++F+ + + ISW+ ++ G + +G GR+ L+LF LM
Sbjct: 291 LQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEK 350
Query: 308 -VFPDDVTFIALISACSHGGLVDQGLILFKAM-STVYEIVPQMQHYACVVDMYGRAGLLE 365
V PD VT +A++S CSHG + D GL +F M + Y P +HY C+VDM GRAG ++
Sbjct: 351 RVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRID 410
Query: 366 EAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFA 425
EA FI+ MP + V G+LL ACR+H + ++ + + + L+ + + G + ++SN +A
Sbjct: 411 EAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYA 470
Query: 426 GADRWEDTNKIRDEIRRMGLKKKTGCSWIE 455
A RW D N +R + + + K+ G SWI+
Sbjct: 471 SAGRWADVNNVRAMMMQKAVTKEPGRSWIQ 500
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 183/377 (48%), Gaps = 17/377 (4%)
Query: 65 HQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGIDVKPNANTLVSVLSACSSLVSH 124
H+ F+S V+ IS L G +EA+ + + + ++L+AC +
Sbjct: 9 HRSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRAL 68
Query: 125 KLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGY 184
+ G+ +HAH ++ L +L FY +C L + +MP++NVVSWT MI Y
Sbjct: 69 RDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRY 128
Query: 185 AERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSV 244
++ G EA++VF EM ++ + +PNE T VL++C S L GK +H I +++
Sbjct: 129 SQTGHSSEALTVFAEMMRS-DGKPNEFTFATVLTSCIRASGLGLGKQIHGLI-VKWNYDS 186
Query: 245 SNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMI 304
VG+++++MY K G + A ++F L +D +S + +I+G A G +AL++F +
Sbjct: 187 HIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLH 246
Query: 305 INAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYAC----VVDMYGR 360
+ P+ VT+ +L++A S L+D G + + + ++ YA ++DMY +
Sbjct: 247 SEGMSPNYVTYASLLTALSGLALLDHG-----KQAHCHVLRRELPFYAVLQNSLIDMYSK 301
Query: 361 AGLLEEAEAFIREMPIEAEWSVWGALLNACRIH---RNDEMFDRIRQDLVNKKGVSVGTF 417
G L A MP S W A+L H R R+ +D K +V
Sbjct: 302 CGNLSYARRLFDNMPERTAIS-WNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLL 360
Query: 418 ALMSNTFAGADRWEDTN 434
A++S G R EDT
Sbjct: 361 AVLSGCSHG--RMEDTG 375
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 118/224 (52%), Gaps = 3/224 (1%)
Query: 1 MLSCPSSYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKD 60
M+ N +TF L +C A +IH ++++ + IF+ +SLL Y
Sbjct: 144 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 203
Query: 61 IFSAHQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSA 117
I A +IF + DVVS T II+G ++ G +EA++MF + + PN T S+L+A
Sbjct: 204 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 263
Query: 118 CSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSW 177
S L GK H H LR +L N+++D Y +CG+L+ LF MP+R +SW
Sbjct: 264 LSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISW 323
Query: 178 TTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACS 221
M+ GY++ G +E + +F+ M K +P+ TL+ VLS CS
Sbjct: 324 NAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS 367
>sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protein At1g06140,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2
SV=1
Length = 558
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/452 (33%), Positives = 256/452 (56%), Gaps = 6/452 (1%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
+ + A+KAC + + IH ++ G D ++ SL+ Y + + SA ++F
Sbjct: 108 DSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVF 167
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMFC---GIDVKPNANTLVSVLSACSSLVSHK 125
+ + + V W ++ G K E +FC + +A TL+ ++ AC ++ + K
Sbjct: 168 DEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGK 227
Query: 126 LGKAIHAHSLR-NLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGY 184
+GK +H S+R + + + L +I+D Y++C L + LF RNVV WTT+I G+
Sbjct: 228 VGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGF 287
Query: 185 AERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSV 244
A+ EA +F++M + + PN+ TL +L +CSS+ +L GK VH Y+ R + +
Sbjct: 288 AKCERAVEAFDLFRQMLR-ESILPNQCTLAAILVSCSSLGSLRHGKSVHGYM-IRNGIEM 345
Query: 245 SNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMI 304
+ + I+MY +CG++ +A VF+M+ ++ ISWS++I+ +NG +AL F M
Sbjct: 346 DAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMK 405
Query: 305 INAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLL 364
V P+ VTF++L+SACSH G V +G F++M+ Y +VP+ +HYAC+VD+ GRAG +
Sbjct: 406 SQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEI 465
Query: 365 EEAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTF 424
EA++FI MP++ S WGALL+ACRIH+ ++ I + L++ + + L+SN +
Sbjct: 466 GEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIY 525
Query: 425 AGADRWEDTNKIRDEIRRMGLKKKTGCSWIEV 456
A A WE N +R ++ G +K G S EV
Sbjct: 526 ADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 182/402 (45%), Gaps = 34/402 (8%)
Query: 5 PSSYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSA 64
P + T +A +L H Q +HA VI +G ++ + +SL + Y+ + A
Sbjct: 3 PVNRARALLTILSQAKTLNHTQQ----VHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFA 58
Query: 65 HQIFNSVVF--PDVVSWTTIISGLSK---CGF------------HKEAIDMFCGIDVKPN 107
FN + + SW TI+SG SK C + H + +D F
Sbjct: 59 TSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSF-------- 110
Query: 108 ANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFV 167
LV + AC L + G IH +++N + + + ++++ Y + G++ S +F
Sbjct: 111 --NLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFD 168
Query: 168 KMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALS 227
++P RN V W ++ GY + E +F M T A + TL+ ++ AC ++ A
Sbjct: 169 EIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLA-LDALTLICLVKACGNVFAGK 227
Query: 228 FGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGL 287
GK VH R + S+ + ++I+MYVKC + A ++F ++ + W+T+ISG
Sbjct: 228 VGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGF 287
Query: 288 AMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQ 347
A +A LF M+ ++ P+ T A++ +CS G + G + M I
Sbjct: 288 AKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYM-IRNGIEMD 346
Query: 348 MQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNA 389
++ +DMY R G ++ A MP E W +++NA
Sbjct: 347 AVNFTSFIDMYARCGNIQMARTVFDMMP-ERNVISWSSMINA 387
>sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protein At2g34400
OS=Arabidopsis thaliana GN=PCMP-E23 PE=3 SV=2
Length = 621
Score = 273 bits (698), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/458 (32%), Positives = 257/458 (56%), Gaps = 13/458 (2%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
+ +T+ AC+ +H+ + + G D+ I +SL+ Y + A ++F
Sbjct: 131 DKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLF 190
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGID---VKPNANTLVSVLSACSSLVSHK 125
+ + D VSW ++ISG S+ G+ K+A+D+F ++ +P+ TLVS+L ACS L +
Sbjct: 191 DEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLR 250
Query: 126 LGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYA 185
G+ + ++ + L + ++ Y +CG L S +F +M K++ V+WT MI Y+
Sbjct: 251 TGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYS 310
Query: 186 ERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVS 245
+ G EA +F EMEKT P+ TL VLSAC S+ AL GK + ++ S +LS+
Sbjct: 311 QNGKSSEAFKLFFEMEKTG-VSPDAGTLSTVLSACGSVGALELGKQIETHAS---ELSLQ 366
Query: 246 N--LVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLM 303
+ V +++MY KCG V A++VF + K++ +W+ +I+ A G ++AL LF M
Sbjct: 367 HNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM 426
Query: 304 IINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGL 363
+V P D+TFI ++SAC H GLV QG F MS+++ +VP+++HY ++D+ RAG+
Sbjct: 427 ---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGM 483
Query: 364 LEEAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDR-IRQDLVNKKGVSVGTFALMSN 422
L+EA F+ P + + + A+L AC ++ + ++ +R + K+ + G + + SN
Sbjct: 484 LDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSN 543
Query: 423 TFAGADRWEDTNKIRDEIRRMGLKKKTGCSWIEVNPSI 460
A W+++ K+R +R G+ K GCSWIE+ +
Sbjct: 544 VLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGEL 581
Score = 175 bits (443), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 196/355 (55%), Gaps = 14/355 (3%)
Query: 42 LHDIFIQNSLLHFYVTVKDIFSAHQIFNSVVFPDVVSWTTIISGLSKC-GFHKEAIDMFC 100
LH + N L+ V + D + +F+ P+ S+ +I GL+ H+ A+ ++
Sbjct: 62 LHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYR 121
Query: 101 GID---VKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCG 157
+ +KP+ T V AC+ L +G+++H+ + E ++ ++++++ Y +CG
Sbjct: 122 RMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCG 181
Query: 158 SLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVL 217
+ LF ++ +R+ VSW +MI GY+E G+ K+A+ +F++ME+ + EP+E TLV++L
Sbjct: 182 QVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEE-EGFEPDERTLVSML 240
Query: 218 SACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDK 277
ACS + L G+ + T+ + +S +G+ +I+MY KCGD+ A +VFN + KD+
Sbjct: 241 GACSHLGDLRTGRLLEEMAITK-KIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDR 299
Query: 278 ISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKA 337
++W+ +I+ + NG +A +LF M V PD T ++SAC G ++ G K
Sbjct: 300 VAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG----KQ 355
Query: 338 MST-VYEIVPQMQHYAC--VVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNA 389
+ T E+ Q Y +VDMYG+ G +EEA MP++ E + W A++ A
Sbjct: 356 IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNE-ATWNAMITA 409
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 273 bits (697), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 247/456 (54%), Gaps = 10/456 (2%)
Query: 11 YTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNS 70
+TF+ LKA H ++HA + G D + N +L FY + +F+
Sbjct: 251 FTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDE 310
Query: 71 VVFPDVVSWTTIISGLSKCGFHKEAIDMF-----CGIDVKPNANTLVSVLSACSSLVSHK 125
+ D VS+ +IS S+ ++ ++ F G D + ++LS ++L S +
Sbjct: 311 MPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRR--NFPFATMLSIAANLSSLQ 368
Query: 126 LGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYA 185
+G+ +H +L ++ + + N+++D Y +C +F +P+R VSWT +I GY
Sbjct: 369 MGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYV 428
Query: 186 ERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVS 245
++G + +F +M + +++T VL A +S ++L GK +H++I +L +
Sbjct: 429 QKGLHGAGLKLFTKM-RGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-N 486
Query: 246 NLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMII 305
G+ +++MY KCG + A+QVF + ++ +SW+ +IS A NG G A+ F+ MI
Sbjct: 487 VFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIE 546
Query: 306 NAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLE 365
+ + PD V+ + +++ACSH G V+QG F+AMS +Y I P+ +HYAC++D+ GR G
Sbjct: 547 SGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFA 606
Query: 366 EAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVN-KKGVSVGTFALMSNTF 424
EAE + EMP E + +W ++LNACRIH+N + +R + L + +K + MSN +
Sbjct: 607 EAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIY 666
Query: 425 AGADRWEDTNKIRDEIRRMGLKKKTGCSWIEVNPSI 460
A A WE ++ +R G+KK SW+EVN I
Sbjct: 667 AAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKI 702
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 185/388 (47%), Gaps = 13/388 (3%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIF--IQNSLLHFYVTVKDIFSAHQ 66
+H TFT L C+ A P ++HA ++ G + F + N LL Y V+ + A
Sbjct: 146 DHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACV 205
Query: 67 IFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGIDV---KPNANTLVSVLSACSSLVS 123
+F + D V++ T+I+G K G + E+I +F + +P+ T VL A L
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265
Query: 124 HKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGG 183
LG+ +HA S+ + + N ILDFY + + LF +MP+ + VS+ +I
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325
Query: 184 YAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLS 243
Y++ + ++ F+EM+ N +LS +++S+L G+ +H S
Sbjct: 326 YSQADQYEASLHFFREMQCMGFDRRN-FPFATMLSIAANLSSLQMGRQLHCQALLATADS 384
Query: 244 VSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLM 303
+ + VGN++++MY KC A +F L + +SW+ +ISG G L+LF+ M
Sbjct: 385 ILH-VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKM 443
Query: 304 IINAVFPDDVTFIALISACSHGG--LVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRA 361
+ + D TF ++ A + L+ + L F S E V + +VDMY +
Sbjct: 444 RGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG---SGLVDMYAKC 500
Query: 362 GLLEEAEAFIREMPIEAEWSVWGALLNA 389
G +++A EMP S W AL++A
Sbjct: 501 GSIKDAVQVFEEMPDRNAVS-WNALISA 527
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 5/242 (2%)
Query: 137 NLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSV 196
+ N + N ++ +++ G ++S LF MP R VV+WT ++G YA EA +
Sbjct: 73 EMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKL 132
Query: 197 FQEMEKTKEAE-PNEATLVNVLSACSSISALSFGKYVHSY-ISTRYDLSVSNLVGNAVIN 254
F++M ++ P+ T +L C+ + VH++ + +D + V N ++
Sbjct: 133 FRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLK 192
Query: 255 MYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVT 314
Y + + +A +F + KD ++++T+I+G +G +++ LF M + P D T
Sbjct: 193 SYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFT 252
Query: 315 FIALISACSHGGLVDQGL-ILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIRE 373
F ++ A GL D L A+S ++D Y + + E E
Sbjct: 253 FSGVLKAVV--GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDE 310
Query: 374 MP 375
MP
Sbjct: 311 MP 312
>sp|Q9MA95|PP214_ARATH Putative pentatricopeptide repeat-containing protein At3g05240
OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2
Length = 565
Score = 273 bits (697), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 158/469 (33%), Positives = 253/469 (53%), Gaps = 16/469 (3%)
Query: 1 MLSCPSSYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKD 60
ML S +++TF LKACS Q +H V++ G ++++ LLH Y+ +
Sbjct: 98 MLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGE 157
Query: 61 IFSAHQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGID---VKPNANTLVSVLSA 117
+ ++F + +VV+W ++ISG +AI+ F + VK N +V +L A
Sbjct: 158 VNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVA 217
Query: 118 CSSLVSHKLGKAIHAHSLRNLNEN---------NIILDNAILDFYIRCGSLASCGYLFVK 168
C GK H L+ L + N+IL +++D Y +CG L + YLF
Sbjct: 218 CGRCKDIVTGKWFHGF-LQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDG 276
Query: 169 MPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSF 228
MP+R +VSW ++I GY++ G +EA+ +F +M A P++ T ++V+ A
Sbjct: 277 MPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIA-PDKVTFLSVIRASMIQGCSQL 335
Query: 229 GKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLA 288
G+ +H+Y+S + + +V A++NMY K GD A + F L KD I+W+ VI GLA
Sbjct: 336 GQSIHAYVSKTGFVKDAAIV-CALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLA 394
Query: 289 MNGCGRQALQLFSLMIINA-VFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQ 347
+G G +AL +F M PD +T++ ++ ACSH GLV++G F M ++ + P
Sbjct: 395 SHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPT 454
Query: 348 MQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLV 407
++HY C+VD+ RAG EEAE ++ MP++ ++WGALLN C IH N E+ DRIR +
Sbjct: 455 VEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVA 514
Query: 408 NKKGVSVGTFALMSNTFAGADRWEDTNKIRDEIRRMGLKKKTGCSWIEV 456
+ + G + L+SN +A A RW D IR+ ++ + K G S +E
Sbjct: 515 EPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVET 563
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 175/373 (46%), Gaps = 25/373 (6%)
Query: 25 PHQKALEIHAHVIEYGHLHDIFIQNS----------LLHFYVTVKDIFS---AHQIFNSV 71
P LE ++E LH + I++S L+ F T + + A +F S+
Sbjct: 8 PILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESI 67
Query: 72 VFPDVVSWTTIISGLSKCGFHKEAIDMFCGIDVK---PNANTLVSVLSACSSLVSHKLGK 128
P V W ++I G S +A+ + + K P+ T VL ACS L + G
Sbjct: 68 DCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGS 127
Query: 129 AIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERG 188
+H ++ E N+ + +L Y+ CG + +F +P+ NVV+W ++I G+
Sbjct: 128 CVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNN 187
Query: 189 FCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYIS-TRYDLSVSNL 247
+A+ F+EM+ + + NE +V++L AC + GK+ H ++ +D +
Sbjct: 188 RFSDAIEAFREMQ-SNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSK 246
Query: 248 VG------NAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFS 301
VG ++I+MY KCGD+ A +F+ + + +SW+++I+G + NG +AL +F
Sbjct: 247 VGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFL 306
Query: 302 LMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRA 361
M+ + PD VTF+++I A G G + +S V +V+MY +
Sbjct: 307 DMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT-GFVKDAAIVCALVNMYAKT 365
Query: 362 GLLEEAEAFIREM 374
G E A+ ++
Sbjct: 366 GDAESAKKAFEDL 378
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 131/300 (43%), Gaps = 24/300 (8%)
Query: 104 VKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCG 163
+K + ++S L C SLV +H +++ N+I + ++DF C +
Sbjct: 2 MKKHYKPILSQLENCRSLVELN---QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLS 58
Query: 164 Y---LFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSAC 220
Y +F + +V W +MI GY+ +A+ +QEM + K P+ T VL AC
Sbjct: 59 YARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLR-KGYSPDYFTFPYVLKAC 117
Query: 221 SSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISW 280
S + + FG VH ++ + V+ V +++MY+ CG+V ++VF + + ++W
Sbjct: 118 SGLRDIQFGSCVHGFV-VKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAW 176
Query: 281 STVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACS-----------HGGLVD 329
++ISG N A++ F M N V ++ + L+ AC HG L
Sbjct: 177 GSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQG 236
Query: 330 QGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNA 389
G + + ++ ++DMY + G L A MP E W +++
Sbjct: 237 LGFDPYFQSKVGFNVILATS----LIDMYAKCGDLRTARYLFDGMP-ERTLVSWNSIITG 291
>sp|Q9LR69|PPR8_ARATH Pentatricopeptide repeat-containing protein At1g03540
OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1
Length = 609
Score = 272 bits (695), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 148/462 (32%), Positives = 260/462 (56%), Gaps = 11/462 (2%)
Query: 1 MLSCPSSYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKD 60
M+S N +T + A+KACS + H VI +G + FI ++L + Y ++
Sbjct: 154 MVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNRE 213
Query: 61 IFSAHQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFC----GIDVKPNANTLVSVLS 116
A ++F+ + PDV+ WT ++S SK ++EA+ +F G + P+ +T +VL+
Sbjct: 214 PVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLT 273
Query: 117 ACSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVS 176
AC +L K GK IH + N +N+++++++LD Y +CGS+ +F M K+N VS
Sbjct: 274 ACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVS 333
Query: 177 WTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYI 236
W+ ++GGY + G ++A+ +F+EME E + VL AC+ ++A+ GK +H
Sbjct: 334 WSALLGGYCQNGEHEKAIEIFREME-----EKDLYCFGTVLKACAGLAAVRLGKEIHGQY 388
Query: 237 STRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQA 296
R + +V +A+I++Y K G + A +V++ ++ ++ I+W+ ++S LA NG G +A
Sbjct: 389 VRRGCFG-NVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEA 447
Query: 297 LQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVD 356
+ F+ M+ + PD ++FIA+++AC H G+VD+G F M+ Y I P +HY+C++D
Sbjct: 448 VSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMID 507
Query: 357 MYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIHRN-DEMFDRIRQDLVNKKGVSVG 415
+ GRAGL EEAE + + S+WG LL C + + + +RI + ++ +
Sbjct: 508 LLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHM 567
Query: 416 TFALMSNTFAGADRWEDTNKIRDEIRRMGLKKKTGCSWIEVN 457
++ L+SN + R D IR + R G+ K G SWI+ +
Sbjct: 568 SYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWIDAH 609
Score = 145 bits (365), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 198/415 (47%), Gaps = 34/415 (8%)
Query: 13 FTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTV-KDIFSAHQIFNSV 71
+ L+ C+ ++ HAHV++ G D + NSLL Y + + ++F+
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGR 123
Query: 72 VFPDVVSWTTIISGLSKCGFHKEAIDMFC-----GIDVKPNANTLVSVLSACSSLVSHKL 126
D +SWT+++SG H +A+++F G+D N TL S + ACS L +L
Sbjct: 124 FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDA--NEFTLSSAVKACSELGEVRL 181
Query: 127 GKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAE 186
G+ H + + E N + + + Y +F +MP+ +V+ WT ++ +++
Sbjct: 182 GRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK 241
Query: 187 RGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSN 246
+EA+ +F M + K P+ +T VL+AC ++ L GK +H + T + +
Sbjct: 242 NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN-GIGSNV 300
Query: 247 LVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIIN 306
+V +++++MY KCG V A QVFN ++ K+ +SWS ++ G NG +A+++F M
Sbjct: 301 VVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK 360
Query: 307 AVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYAC---------VVDM 357
++ F ++ AC+ GL A+ EI Q C ++D+
Sbjct: 361 DLY----CFGTVLKACA--GLA--------AVRLGKEIHGQYVRRGCFGNVIVESALIDL 406
Query: 358 YGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGV 412
YG++G ++ A +M I W A+L+A + E D+V KKG+
Sbjct: 407 YGKSGCIDSASRVYSKMSIR-NMITWNAMLSALAQNGRGEEAVSFFNDMV-KKGI 459
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 124/303 (40%), Gaps = 45/303 (14%)
Query: 188 GFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNL 247
G EA+ + + E ++L C+ + + G H+++ + L
Sbjct: 40 GQLTEAIRILNSTHSS-EIPATPKLYASLLQTCNKVFSFIHGIQFHAHV-VKSGLETDRN 97
Query: 248 VGNAVINMYVKCG-DVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIIN 306
VGN+++++Y K G + +VF+ KD ISW++++SG +AL++F M+
Sbjct: 98 VGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSF 157
Query: 307 AVFPDDVTFIALISACS-----------HGGLVDQGL----ILFKAMSTVYEI------- 344
+ ++ T + + ACS HG ++ G + ++ +Y +
Sbjct: 158 GLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDA 217
Query: 345 --------VPQMQHYACVVDMYGRAGLLEEA----EAFIREMPIEAEWSVWGALLNACRI 392
P + + V+ + + L EEA A R + + S +G +L AC
Sbjct: 218 RRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGN 277
Query: 393 HRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGADRWEDTNKIRDEIRRM--GLKKKTG 450
R + I L+ +G+ ++ ++ D + +R E R++ G+ KK
Sbjct: 278 LRRLKQGKEIHGKLITN---GIGSNVVVESSL--LDMYGKCGSVR-EARQVFNGMSKKNS 331
Query: 451 CSW 453
SW
Sbjct: 332 VSW 334
>sp|Q8VYH0|PP313_ARATH Pentatricopeptide repeat-containing protein At4g15720
OS=Arabidopsis thaliana GN=PCMP-H1 PE=2 SV=1
Length = 616
Score = 272 bits (695), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 150/439 (34%), Positives = 245/439 (55%), Gaps = 10/439 (2%)
Query: 32 IHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSVVFPDVVSWTTIISGLSKCGF 91
+H ++ G D F N L+ YV +K+I +A ++F+ + P+VVSWT++ISG + G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 92 HKEAIDMFCGI----DVKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILDN 147
+ A+ MF + V PN T SV ACS+L ++GK IHA + NI++ +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 148 AILDFYIRCGSLASCGYLFVKMPK--RNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKE 205
+++D Y +C + + +F M RNVVSWT+MI YA+ EA+ +F+
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 206 AE-PNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGI 264
++ N+ L +V+SACSS+ L +GK H + TR + +V ++++MY KCG +
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLV-TRGGYESNTVVATSLLDMYAKCGSLSC 289
Query: 265 AIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSH 324
A ++F + IS++++I A +G G A++LF M+ + P+ VT + ++ ACSH
Sbjct: 290 AEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSH 349
Query: 325 GGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWS--V 382
GLV++GL M+ Y +VP +HY CVVDM GR G ++EA + + + AE +
Sbjct: 350 SGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALL 409
Query: 383 WGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGADRWEDTNKIRDEIRR 442
WGALL+A R+H E+ + L+ + +SN +A + WED+ +R E++R
Sbjct: 410 WGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKR 469
Query: 443 MGLKKKTGCSWIEVNPSIF 461
G K+ CSWIE S++
Sbjct: 470 SGNVKERACSWIENKDSVY 488
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 152/297 (51%), Gaps = 11/297 (3%)
Query: 5 PSSYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSA 64
P N YTF KACS + IHA + G +I + +SL+ Y D+ +A
Sbjct: 126 PVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETA 185
Query: 65 HQIFNSVV--FPDVVSWTTIISGLSKCGFHKEAIDMFCGIDV-----KPNANTLVSVLSA 117
++F+S++ +VVSWT++I+ ++ EAI++F + + N L SV+SA
Sbjct: 186 RRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISA 245
Query: 118 CSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSW 177
CSSL + GK H R E+N ++ ++LD Y +CGSL+ +F+++ +V+S+
Sbjct: 246 CSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISY 305
Query: 178 TTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYIS 237
T+MI A+ G + AV +F EM + PN TL+ VL ACS ++ G S ++
Sbjct: 306 TSMIMAKAKHGLGEAAVKLFDEMVAGR-INPNYVTLLGVLHACSHSGLVNEGLEYLSLMA 364
Query: 238 TRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNML---AYKDKISWSTVISGLAMNG 291
+Y + + V++M + G V A ++ + A + + W ++S ++G
Sbjct: 365 EKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHG 421
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 271 bits (694), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 166/522 (31%), Positives = 277/522 (53%), Gaps = 73/522 (13%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
+T T L + + + ++H+ +++ G ++ + NSLL+ Y D A +F
Sbjct: 145 TQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVF 204
Query: 69 NSVVFPDV-------------------------------VSWTTIISGLSKCGFHKEAID 97
+ +V D+ V+W ++ISG ++ G+ A+D
Sbjct: 205 DRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALD 264
Query: 98 MFCGID----VKPNANTLVSVLSACSSLVSHKLGKAIHAH-------------------- 133
+F + + P+ TL SVLSAC++L +GK IH+H
Sbjct: 265 IFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMY 324
Query: 134 -------SLRNLNENNIILD------NAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTM 180
+ R L E D A+LD YI+ G + +FV + R+VV+WT M
Sbjct: 325 SRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAM 384
Query: 181 IGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVH-SYISTR 239
I GY + G EA+++F+ M + PN TL +LS SS+++LS GK +H S + +
Sbjct: 385 IVGYEQHGSYGEAINLFRSMVGGGQ-RPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443
Query: 240 YDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLA-YKDKISWSTVISGLAMNGCGRQALQ 298
SVS V NA+I MY K G++ A + F+++ +D +SW+++I LA +G +AL+
Sbjct: 444 EIYSVS--VSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALE 501
Query: 299 LFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMY 358
LF M++ + PD +T++ + SAC+H GLV+QG F M V +I+P + HYAC+VD++
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561
Query: 359 GRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFA 418
GRAGLL+EA+ FI +MPIE + WG+LL+ACR+H+N ++ + L+ + + G ++
Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYS 621
Query: 419 LMSNTFAGADRWEDTNKIRDEIRRMGLKKKTGCSWIEVNPSI 460
++N ++ +WE+ KIR ++ +KK+ G SWIEV +
Sbjct: 622 ALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKV 663
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 189/435 (43%), Gaps = 93/435 (21%)
Query: 42 LHDIFIQNSLLHFYVTVKDIFSAHQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCG 101
L F N++L Y D+ S + F+ + D VSWTT+I G G + +AI +
Sbjct: 77 LRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGD 136
Query: 102 I---DVKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGS 158
+ ++P TL +VL++ ++ + GK +H+ ++ N+ + N++L+ Y +CG
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 159 LASCGYLFVKM-------------------------------PKRNVVSWTTMIGGYAER 187
++F +M +R++V+W +MI G+ +R
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR 256
Query: 188 GFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYI-STRYDLSVSN 246
G+ A+ +F +M + P+ TL +VLSAC+++ L GK +HS+I +T +D +S
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFD--ISG 314
Query: 247 LVGNAVINMYVKC---------------------------------GDVGIAIQVFNMLA 273
+V NA+I+MY +C GD+ A +F L
Sbjct: 315 IVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLK 374
Query: 274 YKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACS---------- 323
+D ++W+ +I G +G +A+ LF M+ P+ T A++S S
Sbjct: 375 DRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQ 434
Query: 324 -HGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSV 382
HG V G I ++S ++ MY +AG + A + E +
Sbjct: 435 IHGSAVKSGEIYSVSVSN------------ALITMYAKAGNITSASRAFDLIRCERDTVS 482
Query: 383 WGALLNACRIHRNDE 397
W +++ A H + E
Sbjct: 483 WTSMIIALAQHGHAE 497
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 271 bits (694), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 162/498 (32%), Positives = 263/498 (52%), Gaps = 48/498 (9%)
Query: 1 MLSCPSSYNH--YTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYV-- 56
++SC S H Y L+ CS ++ +IHA +++ G + D + L F +
Sbjct: 3 VISCSFSLEHNLYETMSCLQRCS---KQEELKQIHARMLKTGLMQDSYAITKFLSFCISS 59
Query: 57 TVKDIFSAHQI-FNSVVFPDVVSWTTIISGLSKCGFHKEA-----IDMFCGIDVKPNANT 110
T D QI F+ PD W +I G S C E M C NA T
Sbjct: 60 TSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFS-CSDEPERSLLLYQRMLCS-SAPHNAYT 117
Query: 111 LVSVLSACSSLVSHKLGKAIHAHSLRNLNENNI---------------------ILD--- 146
S+L ACS+L + + IHA + EN++ + D
Sbjct: 118 FPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP 177
Query: 147 -------NAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQE 199
N+++ Y++ G + LF KM ++N +SWTTMI GY + KEA+ +F E
Sbjct: 178 EPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHE 237
Query: 200 MEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKC 259
M+ + + EP+ +L N LSAC+ + AL GK++HSY++ + + + +++G +I+MY KC
Sbjct: 238 MQNS-DVEPDNVSLANALSACAQLGALEQGKWIHSYLN-KTRIRMDSVLGCVLIDMYAKC 295
Query: 260 GDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALI 319
G++ A++VF + K +W+ +ISG A +G GR+A+ F M + P+ +TF A++
Sbjct: 296 GEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVL 355
Query: 320 SACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAE 379
+ACS+ GLV++G ++F +M Y + P ++HY C+VD+ GRAGLL+EA+ FI+EMP++
Sbjct: 356 TACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPN 415
Query: 380 WSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGADRWEDTNKIRDE 439
+WGALL ACRIH+N E+ + I + L+ G + +N A +W+ + R
Sbjct: 416 AVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRL 475
Query: 440 IRRMGLKKKTGCSWIEVN 457
++ G+ K GCS I +
Sbjct: 476 MKEQGVAKVPGCSTISLE 493
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 271 bits (693), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 149/450 (33%), Positives = 251/450 (55%), Gaps = 5/450 (1%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
N+YTF ALKA A +H +++ ++ D + LL Y + D+ A ++F
Sbjct: 246 NNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVF 305
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGID---VKPNANTLVSVLSACSSLVSHK 125
N + DVV W+ +I+ + GF EA+D+F + V PN TL S+L+ C+
Sbjct: 306 NEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSG 365
Query: 126 LGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYA 185
LG+ +H ++ + +I + NA++D Y +C + + LF ++ +N VSW T+I GY
Sbjct: 366 LGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYE 425
Query: 186 ERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVS 245
G +A S+F+E + + E T + L AC+S++++ G VH ++ + + +
Sbjct: 426 NLGEGGKAFSMFREALRN-QVSVTEVTFSSALGACASLASMDLGVQVHG-LAIKTNNAKK 483
Query: 246 NLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMII 305
V N++I+MY KCGD+ A VFN + D SW+ +ISG + +G GRQAL++ +M
Sbjct: 484 VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD 543
Query: 306 NAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLE 365
P+ +TF+ ++S CS+ GL+DQG F++M + I P ++HY C+V + GR+G L+
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLD 603
Query: 366 EAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFA 425
+A I +P E +W A+L+A N+E R ++++ T+ L+SN +A
Sbjct: 604 KAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYA 663
Query: 426 GADRWEDTNKIRDEIRRMGLKKKTGCSWIE 455
GA +W + IR ++ MG+KK+ G SWIE
Sbjct: 664 GAKQWANVASIRKSMKEMGVKKEPGLSWIE 693
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 191/389 (49%), Gaps = 9/389 (2%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
N + FT LK + +H+ +++ G+ + F+ +L++ Y + SA +F
Sbjct: 145 NPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVF 204
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGIDVK---PNANTLVSVLSACSSLVSHK 125
++ D+V W I+S + G+ ++++ + + + PN T + L A L +
Sbjct: 205 EGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFD 264
Query: 126 LGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYA 185
K +H L+ + + +L Y + G ++ +F +MPK +VV W+ MI +
Sbjct: 265 FAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFC 324
Query: 186 ERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSY-ISTRYDLSV 244
+ GFC EAV +F M + PNE TL ++L+ C+ G+ +H + +DL +
Sbjct: 325 QNGFCNEAVDLFIRMREAF-VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDI 383
Query: 245 SNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMI 304
V NA+I++Y KC + A+++F L+ K+++SW+TVI G G G +A +F +
Sbjct: 384 --YVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREAL 441
Query: 305 INAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLL 364
N V +VTF + + AC+ +D G + ++ ++ ++DMY + G +
Sbjct: 442 RNQVSVTEVTFSSALGACASLASMDLG-VQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDI 500
Query: 365 EEAEAFIREMPIEAEWSVWGALLNACRIH 393
+ A++ EM + + W AL++ H
Sbjct: 501 KFAQSVFNEMET-IDVASWNALISGYSTH 528
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 183/420 (43%), Gaps = 24/420 (5%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
+ + + L+ C + A IH +++ G D+F N LL+ YV A +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 69 NSVVFPDVVSWTTIISGLS-------KCGFHKEAIDMFCGIDVKPNANTLVSVLSACSSL 121
+ + + VS+ T+ G + H+E ++ N + S L SL
Sbjct: 108 DEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHEL--------NPHVFTSFLKLFVSL 159
Query: 122 VSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMI 181
++ +H+ ++ ++N + A+++ Y CGS+ S +F + +++V W ++
Sbjct: 160 DKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIV 219
Query: 182 GGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYI-STRY 240
Y E G+ ++++ + M + PN T L A + A F K VH I T Y
Sbjct: 220 SCYVENGYFEDSLKLLSCM-RMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCY 278
Query: 241 DLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLF 300
L VG ++ +Y + GD+ A +VFN + D + WS +I+ NG +A+ LF
Sbjct: 279 VLDPR--VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLF 336
Query: 301 SLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYA--CVVDMY 358
M V P++ T ++++ C+ G G L V ++ + Y ++D+Y
Sbjct: 337 IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLH---GLVVKVGFDLDIYVSNALIDVY 393
Query: 359 GRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFA 418
+ ++ A E+ + E S ++ + + F R+ L N+ V+ TF+
Sbjct: 394 AKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFS 453
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 32/296 (10%)
Query: 100 CGIDVKPNANTLVSVLSACSSLVSHKLG---------------KAIHAHSLRNLNENNII 144
CG VK A L S S L SH G KAIH L+ + ++
Sbjct: 26 CGFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLF 85
Query: 145 LDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTK 204
N +L+ Y++ G LF +MP+RN VS+ T+ GYA C++ + ++ + +
Sbjct: 86 ATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREG 141
Query: 205 EAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGI 264
E N + L S+ ++HS I + + VG A+IN Y CG V
Sbjct: 142 H-ELNPHVFTSFLKLFVSLDKAEICPWLHSPI-VKLGYDSNAFVGAALINAYSVCGSVDS 199
Query: 265 AIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSH 324
A VF + KD + W+ ++S NG +L+L S M + P++ TF + A
Sbjct: 200 ARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIG 259
Query: 325 GGLVD-----QGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMP 375
G D G IL T Y + P++ ++ +Y + G + +A EMP
Sbjct: 260 LGAFDFAKGVHGQIL----KTCYVLDPRVG--VGLLQLYTQLGDMSDAFKVFNEMP 309
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 7 SYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQ 66
S TF+ AL AC+ +++H I+ + + + NSL+ Y DI A
Sbjct: 446 SVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQS 505
Query: 67 IFNSVVFPDVVSWTTIISGLSKCGFHKEA---IDMFCGIDVKPNANTLVSVLSACSS 120
+FN + DV SW +ISG S G ++A +D+ D KPN T + VLS CS+
Sbjct: 506 VFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSN 562
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 270 bits (691), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/459 (31%), Positives = 259/459 (56%), Gaps = 9/459 (1%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
N +TF+ LKAC L + +K L+IH ++ G + + NSL+ Y I A ++F
Sbjct: 106 NEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVF 165
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMF-----CGIDVKPNANTLVSVLSACSSLVS 123
+V ++SW +I+G G+ +A+D F I +P+ TL S+L ACSS
Sbjct: 166 RRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGM 225
Query: 124 HKLGKAIHAHSLRN--LNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMI 181
GK IH +R+ ++ + +++D Y++CG L S F ++ ++ ++SW+++I
Sbjct: 226 IYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLI 285
Query: 182 GGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYD 241
GYA+ G EA+ +F+ +++ ++ + L +++ + + L GK + + ++ +
Sbjct: 286 LGYAQEGEFVEAMGLFKRLQELN-SQIDSFALSSIIGVFADFALLRQGKQMQA-LAVKLP 343
Query: 242 LSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFS 301
+ V N+V++MY+KCG V A + F + KD ISW+ VI+G +G G++++++F
Sbjct: 344 SGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFY 403
Query: 302 LMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRA 361
M+ + + PD+V ++A++SACSH G++ +G LF + + I P+++HYACVVD+ GRA
Sbjct: 404 EMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRA 463
Query: 362 GLLEEAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMS 421
G L+EA+ I MPI+ +W LL+ CR+H + E+ + + L+ + + +MS
Sbjct: 464 GRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMS 523
Query: 422 NTFAGADRWEDTNKIRDEIRRMGLKKKTGCSWIEVNPSI 460
N + A W + R+ GLKK+ G SW+E+ +
Sbjct: 524 NLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREV 562
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 193/377 (51%), Gaps = 16/377 (4%)
Query: 17 LKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSVVFPDV 76
L+ C+ + ++H ++++ G ++ N L+ Y ++ A+++F+S+ +V
Sbjct: 13 LRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNV 72
Query: 77 VSWTTIISGLSKCGFHKEAIDMFCGID---VKPNANTLVSVLSACSSLVSHKLGKAIHAH 133
VSW+ ++SG G K ++ +F + + PN T + L AC L + + G IH
Sbjct: 73 VSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGF 132
Query: 134 SLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEA 193
L+ E + + N+++D Y +CG + +F ++ R+++SW MI G+ G+ +A
Sbjct: 133 CLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKA 192
Query: 194 VSVFQEMEKTKEAE-PNEATLVNVLSACSSISALSFGKYVHSY-ISTRYDLSVSNLVGNA 251
+ F M++ E P+E TL ++L ACSS + GK +H + + + + S + +
Sbjct: 193 LDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGS 252
Query: 252 VINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFS-LMIINAVFP 310
++++YVKCG + A + F+ + K ISWS++I G A G +A+ LF L +N+
Sbjct: 253 LVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI- 311
Query: 311 DDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVP---QMQHYACVVDMYGRAGLLEEA 367
D ++I + L+ QG K M + +P + VVDMY + GL++EA
Sbjct: 312 DSFALSSIIGVFADFALLRQG----KQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEA 367
Query: 368 EAFIREMPIEA--EWSV 382
E EM ++ W+V
Sbjct: 368 EKCFAEMQLKDVISWTV 384
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 124/230 (53%), Gaps = 7/230 (3%)
Query: 106 PNA-NTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGY 164
PN LVS+L C+ G +H + L++ + N+I N ++D Y +C
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 165 LFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSIS 224
+F MP+RNVVSW+ ++ G+ G K ++S+F EM + + PNE T L AC ++
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGR-QGIYPNEFTFSTNLKACGLLN 121
Query: 225 ALSFGKYVHSY-ISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTV 283
AL G +H + + +++ V VGN++++MY KCG + A +VF + + ISW+ +
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVE--VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179
Query: 284 ISGLAMNGCGRQALQLFSLMIINAV--FPDDVTFIALISACSHGGLVDQG 331
I+G G G +AL F +M + PD+ T +L+ ACS G++ G
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAG 229
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 98/182 (53%), Gaps = 6/182 (3%)
Query: 208 PNE-ATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAI 266
PN+ LV++L C+ G VH Y+ + ++ + N +I+MY KC + +A
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYL-LKSGSGLNLITSNYLIDMYCKCREPLMAY 61
Query: 267 QVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGG 326
+VF+ + ++ +SWS ++SG +NG + +L LFS M ++P++ TF + AC
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 327 LVDQGLILFK-AMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGA 385
+++GL + + +E++ ++ + +VDMY + G + EAE R + ++ W A
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGN--SLVDMYSKCGRINEAEKVFRRI-VDRSLISWNA 178
Query: 386 LL 387
++
Sbjct: 179 MI 180
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 270 bits (691), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/419 (35%), Positives = 234/419 (55%), Gaps = 11/419 (2%)
Query: 41 HLHDIFIQNSLLHFYVTVKDIFSAHQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFC 100
++ D+ N+++ Y I A Q+F+ DV +WT ++SG + +EA ++F
Sbjct: 246 NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF- 304
Query: 101 GIDVKPNANTLVSVLSACSSLVSHKLGKAIH-AHSLRNLNE-NNIILDNAILDFYIRCGS 158
D P N + S + L + G+ + A L ++ N+ N ++ Y +CG
Sbjct: 305 --DKMPERNEV----SWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGK 358
Query: 159 LASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLS 218
++ LF KMPKR+ VSW MI GY++ G EA+ +F +ME+ + N ++ + LS
Sbjct: 359 ISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMER-EGGRLNRSSFSSALS 417
Query: 219 ACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKI 278
C+ + AL GK +H + + VGNA++ MY KCG + A +F +A KD +
Sbjct: 418 TCADVVALELGKQLHGRL-VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIV 476
Query: 279 SWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAM 338
SW+T+I+G + +G G AL+ F M + PDD T +A++SACSH GLVD+G F M
Sbjct: 477 SWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTM 536
Query: 339 STVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIHRNDEM 398
+ Y ++P QHYAC+VD+ GRAGLLE+A ++ MP E + ++WG LL A R+H N E+
Sbjct: 537 TQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTEL 596
Query: 399 FDRIRQDLVNKKGVSVGTFALMSNTFAGADRWEDTNKIRDEIRRMGLKKKTGCSWIEVN 457
+ + + + G + L+SN +A + RW D K+R +R G+KK G SWIE+
Sbjct: 597 AETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQ 655
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 156/374 (41%), Gaps = 69/374 (18%)
Query: 43 HDIFIQNSLLHFYVTVKDIFSAHQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI 102
D+ N ++ YV +++ A ++F + DV SW T++SG ++ G +A +F +
Sbjct: 124 RDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRM 183
Query: 103 DVKPNA--NTLVSVL-------SACSSLVSH----------------KLGKAIHAHS-LR 136
K + N L+S AC S K K + A
Sbjct: 184 PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFD 243
Query: 137 NLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSV 196
++N +++ N I+ Y + G + LF + P ++V +WT M+ GY + +EA +
Sbjct: 244 SMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAREL 303
Query: 197 FQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMY 256
F +M E NE + +L+ + K + + R +VS N +I Y
Sbjct: 304 FDKM-----PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR---NVSTW--NTMITGY 353
Query: 257 VKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFI 316
+CG + A +F+ + +D +SW+ +I+G + +G +AL+LF M + +F
Sbjct: 354 AQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFS 413
Query: 317 ALISACS-----------HGGLVDQGLILFKAMSTVYEIVPQMQHYACVVD-----MYGR 360
+ +S C+ HG LV G YE C V MY +
Sbjct: 414 SALSTCADVVALELGKQLHGRLVKGG----------YET-------GCFVGNALLLMYCK 456
Query: 361 AGLLEEAEAFIREM 374
G +EEA +EM
Sbjct: 457 CGSIEEANDLFKEM 470
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 149/332 (44%), Gaps = 29/332 (8%)
Query: 75 DVVSWTTIISGLSKCGFHKEAIDMFCGIDVKPNANTLVSVLSACSSLVSHKLGKAIHAHS 134
D+ W IS + G EA+ +F + + ++ + ++S +L + +
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMP-RWSSVSYNGMISGYLRNGEFELARKL---- 117
Query: 135 LRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAV 194
+ E +++ N ++ Y+R +L LF MP+R+V SW TM+ GYA+ G +A
Sbjct: 118 FDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDAR 177
Query: 195 SVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVIN 254
SVF M E N+ + +LSA S + + +R + ++ + N ++
Sbjct: 178 SVFDRM-----PEKNDVSWNALLSAYVQNSKMEEACML---FKSRENWALVSW--NCLLG 227
Query: 255 MYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVT 314
+VK + A Q F+ + +D +SW+T+I+G A +G +A QLF + VF T
Sbjct: 228 GFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF----T 283
Query: 315 FIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREM 374
+ A++S +V++ LF M E+ + ++ Y + +E A+ M
Sbjct: 284 WTAMVSGYIQNRMVEEARELFDKMPERNEV-----SWNAMLAGYVQGERMEMAKELFDVM 338
Query: 375 PIEAEWSVWGALLNA----CRIHRNDEMFDRI 402
P S W ++ +I +FD++
Sbjct: 339 PCR-NVSTWNTMITGYAQCGKISEAKNLFDKM 369
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 13/183 (7%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
N +F+ AL C+ + ++H +++ G+ F+ N+LL Y I A+ +F
Sbjct: 408 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 467
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGID---VKPNANTLVSVLSACSSLVSHK 125
+ D+VSW T+I+G S+ GF + A+ F + +KP+ T+V+VLSACS
Sbjct: 468 KEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVD 527
Query: 126 LGKAIHAHSLRNLNENNIILDNA-----ILDFYIRCGSLASCGYLFVKMP-KRNVVSWTT 179
G+ + ++ ++ N+ ++D R G L L MP + + W T
Sbjct: 528 KGR----QYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGT 583
Query: 180 MIG 182
++G
Sbjct: 584 LLG 586
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 112/267 (41%), Gaps = 45/267 (16%)
Query: 166 FVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISA 225
+K ++ W I Y G C EA+ VF+ M + N ++S
Sbjct: 56 LLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYN-----GMISGYLRNGE 110
Query: 226 LSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVIS 285
+ + + R DL + N +I YV+ ++G A ++F ++ +D SW+T++S
Sbjct: 111 FELARKLFDEMPER-DL----VSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLS 165
Query: 286 GLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMST----- 340
G A NGC A +F M +DV++ AL+SA +++ +LFK+
Sbjct: 166 GYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVS 221
Query: 341 ----------VYEIVPQMQHYA-----------CVVDMYGRAGLLEEAEAFIREMPIEAE 379
+IV Q + ++ Y ++G ++EA E P++
Sbjct: 222 WNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV 281
Query: 380 WSVWGALLNAC----RIHRNDEMFDRI 402
++ W A+++ + E+FD++
Sbjct: 282 FT-WTAMVSGYIQNRMVEEARELFDKM 307
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 270 bits (690), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/450 (32%), Positives = 256/450 (56%), Gaps = 6/450 (1%)
Query: 12 TFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSV 71
TF+ L + S + +IH +++ + DIF+ ++L+ Y + + A IF+
Sbjct: 342 TFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQC 401
Query: 72 VFPDVVSWTTIISGLSKCGFHKEAIDMF---CGIDVKPNANTLVSVLSACSSLVSHKLGK 128
DVV +T +ISG G + ++++MF + + PN TLVS+L L++ KLG+
Sbjct: 402 NSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGR 461
Query: 129 AIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERG 188
+H ++ +N + A++D Y +CG + +F ++ KR++VSW +MI A+
Sbjct: 462 ELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSD 521
Query: 189 FCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLV 248
A+ +F++M + + ++ LSAC+++ + SFGK +H ++ ++ L+
Sbjct: 522 NPSAAIDIFRQMGVSGICY-DCVSISAALSACANLPSESFGKAIHGFM-IKHSLASDVYS 579
Query: 249 GNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMI-INA 307
+ +I+MY KCG++ A+ VF + K+ +SW+++I+ +G + +L LF M+ +
Sbjct: 580 ESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSG 639
Query: 308 VFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEA 367
+ PD +TF+ +IS+C H G VD+G+ F++M+ Y I PQ +HYACVVD++GRAG L EA
Sbjct: 640 IRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA 699
Query: 368 EAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGA 427
++ MP + VWG LL ACR+H+N E+ + L++ + G + L+SN A A
Sbjct: 700 YETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANA 759
Query: 428 DRWEDTNKIRDEIRRMGLKKKTGCSWIEVN 457
WE K+R ++ ++K G SWIE+N
Sbjct: 760 REWESVTKVRSLMKEREVQKIPGYSWIEIN 789
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 202/415 (48%), Gaps = 19/415 (4%)
Query: 7 SYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQ 66
S N TF L C+ +++H V+ G + I+NSLL Y A +
Sbjct: 236 SPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASK 295
Query: 67 IFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSACSSLVS 123
+F + D V+W +ISG + G +E++ F + V P+A T S+L + S +
Sbjct: 296 LFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFEN 355
Query: 124 HKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGG 183
+ K IH + +R+ +I L +A++D Y +C ++ +F + +VV +T MI G
Sbjct: 356 LEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISG 415
Query: 184 YAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLS 243
Y G +++ +F+ + K K PNE TLV++L + AL G+ +H +I + +
Sbjct: 416 YLHNGLYIDSLEMFRWLVKVK-ISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDN 474
Query: 244 VSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLM 303
N +G AVI+MY KCG + +A ++F L+ +D +SW+++I+ A + A+ +F M
Sbjct: 475 RCN-IGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM 533
Query: 304 IINAVFPDDVTFIALISAC------SHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDM 357
++ + D V+ A +SAC S G + +I S VY + ++DM
Sbjct: 534 GVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYS-------ESTLIDM 586
Query: 358 YGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGV 412
Y + G L+ A + M E W +++ AC H + + ++V K G+
Sbjct: 587 YAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGI 640
Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 149/314 (47%), Gaps = 11/314 (3%)
Query: 17 LKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSVVF--P 74
L+ACS + ++ ++HA +I D + +L Y ++F +
Sbjct: 42 LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRS 101
Query: 75 DVVSWTTIISGLSKCGFHKEAI----DMFCGIDVKPNANTLVSVLSACSSLVSHKLGKAI 130
+ W +IIS + G +A+ M C V P+ +T ++ AC +L + K G
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLC-FGVSPDVSTFPCLVKACVALKNFK-GIDF 159
Query: 131 HAHSLRNLNEN-NIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGF 189
+ ++ +L + N + ++++ Y+ G + LF ++ +++ V W M+ GYA+ G
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 190 CKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVG 249
+ F M + + PN T VLS C+S + G +H + + +
Sbjct: 220 LDSVIKGFSVM-RMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVS-GVDFEGSIK 277
Query: 250 NAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVF 309
N++++MY KCG A ++F M++ D ++W+ +ISG +G ++L F MI + V
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 310 PDDVTFIALISACS 323
PD +TF +L+ + S
Sbjct: 338 PDAITFSSLLPSVS 351
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 135/278 (48%), Gaps = 6/278 (2%)
Query: 114 VLSACSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKR- 172
+L ACS+ + GK +HA + N + D IL Y CGS + CG +F ++ R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 173 -NVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKY 231
++ W ++I + G +A++ + +M P+ +T ++ AC ++ +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKM-LCFGVSPDVSTFPCLVKACVALKNFKGIDF 159
Query: 232 VHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNG 291
+ +S+ + + V +++I Y++ G + + ++F+ + KD + W+ +++G A G
Sbjct: 160 LSDTVSS-LGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 292 CGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHY 351
++ FS+M ++ + P+ VTF ++S C+ L+D G+ L + V + +
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL-HGLVVVSGVDFEGSIK 277
Query: 352 ACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNA 389
++ MY + G ++A R M A+ W +++
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMISG 314
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 270 bits (689), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/457 (32%), Positives = 250/457 (54%), Gaps = 7/457 (1%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
N +TF A KA + +IHA ++ G + D+F+ S Y + A ++F
Sbjct: 107 NDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLF 166
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCG---IDVKPNANTLVSVLSACSSLVSHK 125
+ + ++ +W IS G +EAI+ F ID PN+ T + L+ACS +
Sbjct: 167 DEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLN 226
Query: 126 LGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYA 185
LG +H LR+ + ++ + N ++DFY +C + S +F +M +N VSW +++ Y
Sbjct: 227 LGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYV 286
Query: 186 ERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVS 245
+ E SV + E ++ + +VLSAC+ ++ L G+ +H++ + + + +
Sbjct: 287 Q-NHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAH-AVKACVERT 344
Query: 246 NLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMII 305
VG+A+++MY KCG + + Q F+ + K+ ++ +++I G A G AL LF M
Sbjct: 345 IFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAP 404
Query: 306 NAV--FPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGL 363
P+ +TF++L+SACS G V+ G+ +F +M + Y I P +HY+C+VDM GRAG+
Sbjct: 405 RGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGM 464
Query: 364 LEEAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNT 423
+E A FI++MPI+ SVWGAL NACR+H ++ ++L G L+SNT
Sbjct: 465 VERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNT 524
Query: 424 FAGADRWEDTNKIRDEIRRMGLKKKTGCSWIEVNPSI 460
FA A RW + N +R+E++ +G+KK G SWI V +
Sbjct: 525 FAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQV 561
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 158/337 (46%), Gaps = 14/337 (4%)
Query: 46 FIQNSLLHFYVTVKDIFSAHQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI--- 102
F+ N L++ Y + SA + +VVSWT++ISGL++ G A+ F +
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE 102
Query: 103 DVKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASC 162
V PN T A +SL GK IHA +++ ++ + + D Y +
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDA 162
Query: 163 GYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSS 222
LF ++P+RN+ +W I G +EA+ F E + + PN T L+ACS
Sbjct: 163 RKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRI-DGHPNSITFCAFLNACSD 221
Query: 223 ISALSFGKYVHSYI-STRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWS 281
L+ G +H + + +D VS V N +I+ Y KC + + +F + K+ +SW
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVS--VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWC 279
Query: 282 TVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAM--S 339
++++ N +A L+ + V D +++SAC+ G+ GL L +++
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA--GMA--GLELGRSIHAH 335
Query: 340 TVYEIVPQMQHY-ACVVDMYGRAGLLEEAEAFIREMP 375
V V + + +VDMYG+ G +E++E EMP
Sbjct: 336 AVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 144/311 (46%), Gaps = 19/311 (6%)
Query: 107 NANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNE-NNIILDNAILDFYIRCGSLASCGYL 165
+A+ L +L S S +LG+ +HA ++ L+ L N +++ Y + S +
Sbjct: 5 SADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLV 64
Query: 166 FVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISA 225
P RNVVSWT++I G A+ G A+ F EM + + PN+ T A +S+
Sbjct: 65 LRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRR-EGVVPNDFTFPCAFKAVASLRL 123
Query: 226 LSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVIS 285
GK +H+ ++ + + VG + +MY K A ++F+ + ++ +W+ IS
Sbjct: 124 PVTGKQIHA-LAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFIS 182
Query: 286 GLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACS-----HGGLVDQGLILFKAMST 340
+G R+A++ F P+ +TF A ++ACS + G+ GL+L T
Sbjct: 183 NSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDT 242
Query: 341 VYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIHRNDE--- 397
+ + +D YG+ + +E EM + S W +L+ A + DE
Sbjct: 243 DVSVCNGL------IDFYGKCKQIRSSEIIFTEMGTKNAVS-WCSLVAAYVQNHEDEKAS 295
Query: 398 -MFDRIRQDLV 407
++ R R+D+V
Sbjct: 296 VLYLRSRKDIV 306
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 269 bits (688), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 142/439 (32%), Positives = 263/439 (59%), Gaps = 12/439 (2%)
Query: 28 KALEIHAHVIEYG-HLHDIFIQNSLLHFYVTVKD---IFSAHQIFNSVVFP-DVVSWTTI 82
K +IHA I +G + D + L+ + V++ + AH++F+ + P +V W T+
Sbjct: 32 KLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTL 91
Query: 83 ISGLSKCGFHKEAIDMFCGIDV----KPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNL 138
I G ++ G A ++ + V +P+ +T ++ A +++ +LG+ IH+ +R+
Sbjct: 92 IRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSG 151
Query: 139 NENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQ 198
+ I + N++L Y CG +AS +F KMP++++V+W ++I G+AE G +EA++++
Sbjct: 152 FGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYT 211
Query: 199 EMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVK 258
EM +K +P+ T+V++LSAC+ I AL+ GK VH Y+ + L+ + N ++++Y +
Sbjct: 212 EM-NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM-IKVGLTRNLHSSNVLLDLYAR 269
Query: 259 CGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLM-IINAVFPDDVTFIA 317
CG V A +F+ + K+ +SW+++I GLA+NG G++A++LF M + P ++TF+
Sbjct: 270 CGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVG 329
Query: 318 LISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIE 377
++ ACSH G+V +G F+ M Y+I P+++H+ C+VD+ RAG +++A +I+ MP++
Sbjct: 330 ILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ 389
Query: 378 AEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGADRWEDTNKIR 437
+W LL AC +H + ++ + R ++ + G + L+SN +A RW D KIR
Sbjct: 390 PNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIR 449
Query: 438 DEIRRMGLKKKTGCSWIEV 456
++ R G+KK G S +EV
Sbjct: 450 KQMLRDGVKKVPGHSLVEV 468
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 153/285 (53%), Gaps = 4/285 (1%)
Query: 11 YTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNS 70
+T+ +KA + + IH+ VI G I++QNSLLH Y D+ SA+++F+
Sbjct: 122 HTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDK 181
Query: 71 VVFPDVVSWTTIISGLSKCGFHKEAIDMFCGID---VKPNANTLVSVLSACSSLVSHKLG 127
+ D+V+W ++I+G ++ G +EA+ ++ ++ +KP+ T+VS+LSAC+ + + LG
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241
Query: 128 KAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAER 187
K +H + ++ N+ N +LD Y RCG + LF +M +N VSWT++I G A
Sbjct: 242 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301
Query: 188 GFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNL 247
GF KEA+ +F+ ME T+ P E T V +L ACS + G + Y +
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 361
Query: 248 VGNAVINMYVKCGDVGIAIQ-VFNMLAYKDKISWSTVISGLAMNG 291
++++ + G V A + + +M + + W T++ ++G
Sbjct: 362 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 269 bits (688), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 251/451 (55%), Gaps = 6/451 (1%)
Query: 13 FTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSVV 72
+ LK C++ + +HAH+++ HDI + N+LL+ Y + A ++F +
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 73 FPDVVSWTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSACSSLVSHKLGKA 129
D V+WTT+ISG S+ +A+ F + PN TL SV+ A ++ G
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 130 IHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGF 189
+H ++ ++N+ + +A+LD Y R G + +F + RN VSW +I G+A R
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 190 CKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVG 249
++A+ +FQ M + P+ + ++ ACSS L GK+VH+Y+ + V+ G
Sbjct: 243 TEKALELFQGMLRDG-FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA-FAG 300
Query: 250 NAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVF 309
N +++MY K G + A ++F+ LA +D +SW+++++ A +G G++A+ F M +
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR 360
Query: 310 PDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEA 369
P++++F+++++ACSH GL+D+G ++ M IVP+ HY VVD+ GRAG L A
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 370 FIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGADR 429
FI EMPIE ++W ALLNACR+H+N E+ + + G ++ N +A R
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 479
Query: 430 WEDTNKIRDEIRRMGLKKKTGCSWIEVNPSI 460
W D ++R +++ G+KK+ CSW+E+ +I
Sbjct: 480 WNDAARVRKKMKESGVKKEPACSWVEIENAI 510
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 84/169 (49%), Gaps = 11/169 (6%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
+H+++ ACS ++ +HA++I+ G F N+LL Y I A +IF
Sbjct: 261 SHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIF 320
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMF---CGIDVKPNANTLVSVLSACSSLVSHK 125
+ + DVVSW ++++ ++ GF KEA+ F + ++PN + +SVL+ACS S
Sbjct: 321 DRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSH--SGL 378
Query: 126 LGKAIHAHSLRNLNENNIILDN----AILDFYIRCGSLASCGYLFVKMP 170
L + H + L + ++ I+ + ++D R G L +MP
Sbjct: 379 LDEGWHYYEL--MKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP 425
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 268 bits (685), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 149/456 (32%), Positives = 257/456 (56%), Gaps = 7/456 (1%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
N YT+ LK C + +IH+ +I+ + ++ + L+ Y + + +A I
Sbjct: 489 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSACSSLVSHK 125
DVVSWTT+I+G ++ F +A+ F + ++ + L + +SAC+ L + K
Sbjct: 549 IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 608
Query: 126 LGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYA 185
G+ IHA + + +++ NA++ Y RCG + F + + ++W ++ G+
Sbjct: 609 EGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQ 668
Query: 186 ERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYIS-TRYDLSV 244
+ G +EA+ VF M + + + N T + + A S + + GK VH+ I+ T YD
Sbjct: 669 QSGNNEEALRVFVRMNR-EGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 727
Query: 245 SNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMI 304
V NA+I+MY KCG + A + F ++ K+++SW+ +I+ + +G G +AL F MI
Sbjct: 728 E--VCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI 785
Query: 305 INAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLL 364
+ V P+ VT + ++SACSH GLVD+G+ F++M++ Y + P+ +HY CVVDM RAGLL
Sbjct: 786 HSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLL 845
Query: 365 EEAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTF 424
A+ FI+EMPI+ + VW LL+AC +H+N E+ + L+ + T+ L+SN +
Sbjct: 846 SRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 905
Query: 425 AGADRWEDTNKIRDEIRRMGLKKKTGCSWIEVNPSI 460
A + +W+ + R +++ G+KK+ G SWIEV SI
Sbjct: 906 AVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSI 941
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 215/422 (50%), Gaps = 10/422 (2%)
Query: 11 YTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNS 70
Y F+ L AC + ++H V++ G D ++ N+L+ Y + ++ SA IF++
Sbjct: 289 YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN 348
Query: 71 VVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSACSSLVSHKLG 127
+ D V++ T+I+GLS+CG+ ++A+++F + ++P++NTL S++ ACS+ + G
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Query: 128 KAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAER 187
+ +HA++ + +N ++ A+L+ Y +C + + F++ NVV W M+ Y
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 188 GFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNL 247
+ + +F++M+ +E PN+ T ++L C + L G+ +HS I + + ++
Sbjct: 469 DDLRNSFRIFRQMQ-IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI-IKTNFQLNAY 526
Query: 248 VGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINA 307
V + +I+MY K G + A + A KD +SW+T+I+G +AL F M+
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586
Query: 308 VFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEA 367
+ D+V +SAC+ + +G + A + V + +V +Y R G +EE+
Sbjct: 587 IRSDEVGLTNAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCGKIEES 645
Query: 368 E-AFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFAG 426
AF E + W AL++ + N+E R+ + N++G+ F S A
Sbjct: 646 YLAF--EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM-NREGIDNNNFTFGSAVKAA 702
Query: 427 AD 428
++
Sbjct: 703 SE 704
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 190/373 (50%), Gaps = 11/373 (2%)
Query: 1 MLSCPSSYNHYTFTQALKACSLAHPHQKALE-IHAHVIEYGHLHDIFIQNSLLHFYVTVK 59
M+S + N TF+ L+AC +E IHA ++ G + N L+ Y
Sbjct: 177 MVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNG 236
Query: 60 DIFSAHQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCG---IDVKPNANTLVSVLS 116
+ A ++F+ + D SW +ISGLSK EAI +FC + + P SVLS
Sbjct: 237 FVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLS 296
Query: 117 ACSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVS 176
AC + S ++G+ +H L+ ++ + NA++ Y G+L S ++F M +R+ V+
Sbjct: 297 ACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT 356
Query: 177 WTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYI 236
+ T+I G ++ G+ ++A+ +F+ M EP+ TL +++ ACS+ L G+ +H+Y
Sbjct: 357 YNTLINGLSQCGYGEKAMELFKRMH-LDGLEPDSNTLASLVVACSADGTLFRGQQLHAY- 414
Query: 237 STRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQA 296
+T+ + +N + A++N+Y KC D+ A+ F ++ + W+ ++ + R +
Sbjct: 415 TTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNS 474
Query: 297 LQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYAC--V 354
++F M I + P+ T+ +++ C G ++ G + S + + Q+ Y C +
Sbjct: 475 FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE---QIHSQIIKTNFQLNAYVCSVL 531
Query: 355 VDMYGRAGLLEEA 367
+DMY + G L+ A
Sbjct: 532 IDMYAKLGKLDTA 544
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 184/386 (47%), Gaps = 9/386 (2%)
Query: 12 TFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSV 71
T + ACS + ++HA+ + G + I+ +LL+ Y DI +A F
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 450
Query: 72 VFPDVVSWTTIISGLSKCGFHKEAIDMFCGIDVK---PNANTLVSVLSACSSLVSHKLGK 128
+VV W ++ + + +F + ++ PN T S+L C L +LG+
Sbjct: 451 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 129 AIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERG 188
IH+ ++ + N + + ++D Y + G L + + ++ ++VVSWTTMI GY +
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570
Query: 189 FCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLV 248
F +A++ F++M + +E L N +SAC+ + AL G+ +H+ S
Sbjct: 571 FDDKALTTFRQM-LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDLPF 628
Query: 249 GNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAV 308
NA++ +Y +CG + + F D I+W+ ++SG +G +AL++F M +
Sbjct: 629 QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI 688
Query: 309 FPDDVTFIALISACSHGGLVDQGLILFKAMS-TVYEIVPQMQHYACVVDMYGRAGLLEEA 367
++ TF + + A S + QG + ++ T Y+ + + ++ MY + G + +A
Sbjct: 689 DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYD--SETEVCNALISMYAKCGSISDA 746
Query: 368 EAFIREMPIEAEWSVWGALLNACRIH 393
E E+ + E S W A++NA H
Sbjct: 747 EKQFLEVSTKNEVS-WNAIINAYSKH 771
Score = 131 bits (330), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 185/386 (47%), Gaps = 9/386 (2%)
Query: 9 NHYTFTQALKACSLAHPH-QKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQI 67
NH T L+ C + + ++H+ +++ G + + L FY+ D++ A ++
Sbjct: 83 NHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKV 142
Query: 68 FNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSAC-SSLVS 123
F+ + + +W +I L+ E +F + +V PN T VL AC V+
Sbjct: 143 FDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA 202
Query: 124 HKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGG 183
+ + IHA L ++ ++ N ++D Y R G + +F + ++ SW MI G
Sbjct: 203 FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG 262
Query: 184 YAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLS 243
++ EA+ +F +M P +VLSAC I +L G+ +H + + S
Sbjct: 263 LSKNECEAEAIRLFCDM-YVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV-LKLGFS 320
Query: 244 VSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLM 303
V NA++++Y G++ A +F+ ++ +D ++++T+I+GL+ G G +A++LF M
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 304 IINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGL 363
++ + PD T +L+ ACS G + +G L A +T + ++++Y +
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 364 LEEAEAFIREMPIEAEWSVWGALLNA 389
+E A + E +E +W +L A
Sbjct: 440 IETALDYFLETEVE-NVVLWNVMLVA 464
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 119/234 (50%), Gaps = 4/234 (1%)
Query: 91 FHKEAIDMFCGIDVKPNANTLVSVLSAC-SSLVSHKLGKAIHAHSLRNLNENNIILDNAI 149
F ++ ID ++PN TL +L C + S G+ +H+ L+ ++N L +
Sbjct: 67 FQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKL 126
Query: 150 LDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPN 209
DFY+ G L +F +MP+R + +W MI A R E +F M ++ PN
Sbjct: 127 FDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRM-VSENVTPN 185
Query: 210 EATLVNVLSACSSIS-ALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQV 268
E T VL AC S A + +H+ I + L S +V N +I++Y + G V +A +V
Sbjct: 186 EGTFSGVLEACRGGSVAFDVVEQIHARILYQ-GLRDSTVVCNPLIDLYSRNGFVDLARRV 244
Query: 269 FNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISAC 322
F+ L KD SW +ISGL+ N C +A++LF M + + P F +++SAC
Sbjct: 245 FDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC 298
>sp|Q1PEU4|PP201_ARATH Pentatricopeptide repeat-containing protein At2g44880
OS=Arabidopsis thaliana GN=PCMP-E9 PE=2 SV=2
Length = 555
Score = 267 bits (683), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/450 (32%), Positives = 246/450 (54%), Gaps = 9/450 (2%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
+++TFT K+CSL+ + L++H+ + +G D+++ ++ Y + A F
Sbjct: 77 DNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAF 136
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGIDVKPNANTLVSVLSACSSLVSHKLGK 128
+ + VSWT +ISG +CG A +F D P+ +V + V K G
Sbjct: 137 DEMPHRSEVSWTALISGYIRCGELDLASKLF---DQMPHVKDVVIYNAMMDGFV--KSGD 191
Query: 129 AIHAHSL-RNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAER 187
A L + +I ++ Y + + LF MP+RN+VSW TMIGGY +
Sbjct: 192 MTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQN 251
Query: 188 GFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNL 247
+E + +FQEM+ T +P++ T+++VL A S ALS G++ H ++ R L
Sbjct: 252 KQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQ-RKKLDKKVK 310
Query: 248 VGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINA 307
V A+++MY KCG++ A ++F+ + K SW+ +I G A+NG R AL LF M+I
Sbjct: 311 VCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE 370
Query: 308 VFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEA 367
PD++T +A+I+AC+HGGLV++G F M + + +++HY C+VD+ GRAG L+EA
Sbjct: 371 K-PDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEA 428
Query: 368 EAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGA 427
E I MP E + + L+AC +++ E +RI + V + + G + L+ N +A
Sbjct: 429 EDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAAD 488
Query: 428 DRWEDTNKIRDEIRRMGLKKKTGCSWIEVN 457
RW+D +++ +R+ KK+ GCS IE+N
Sbjct: 489 KRWDDFGMVKNVMRKNQAKKEVGCSLIEIN 518
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 11/209 (5%)
Query: 135 LRNLNENNIILDNAILDFYIRCGSLASCGY---LFVKMPKRNVVSWT-TMIGGYAERGFC 190
LR+ E N+ + F + S GY LF + P+R+ + +MI Y E
Sbjct: 2 LRHAIETNVQI---FTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQY 58
Query: 191 KEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGN 250
++ ++++++ K P+ T + +CS + G +HS I R+ V
Sbjct: 59 PDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQI-WRFGFCADMYVST 117
Query: 251 AVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFP 310
V++MY K G +G A F+ + ++ ++SW+ +ISG G A +LF M
Sbjct: 118 GVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM---PHVK 174
Query: 311 DDVTFIALISACSHGGLVDQGLILFKAMS 339
D V + A++ G + LF M+
Sbjct: 175 DVVIYNAMMDGFVKSGDMTSARRLFDEMT 203
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 310 PDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEA 369
PD+ TF L +CS V QGL L + + M VVDMY + G + A
Sbjct: 76 PDNFTFTTLTKSCSLSMCVYQGLQLHSQIWR-FGFCADMYVSTGVVDMYAKFGKMGCARN 134
Query: 370 FIREMPIEAEWSVWGALLNA 389
EMP +E S W AL++
Sbjct: 135 AFDEMPHRSEVS-WTALISG 153
>sp|Q9FHR3|PP403_ARATH Putative pentatricopeptide repeat-containing protein At5g37570
OS=Arabidopsis thaliana GN=PCMP-E37 PE=3 SV=1
Length = 550
Score = 267 bits (682), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/449 (32%), Positives = 243/449 (54%), Gaps = 12/449 (2%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
+ YTF +K CS + +H V+ G D+ + S + FY KD+FSA ++F
Sbjct: 109 DEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVF 168
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGIDVKPNANTLVSVLSACSSLVSH--KL 126
+ + VSWT ++ K G +EA MF D+ P N L + ++LV K
Sbjct: 169 GEMPERNAVSWTALVVAYVKSGELEEAKSMF---DLMPERN-----LGSWNALVDGLVKS 220
Query: 127 GKAIHAHSLRN-LNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYA 185
G ++A L + + + +II +++D Y + G + S LF + +V +W+ +I GYA
Sbjct: 221 GDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYA 280
Query: 186 ERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVS 245
+ G EA VF EM K +P+E +V ++SACS + + V SY+ R + S
Sbjct: 281 QNGQPNEAFKVFSEM-CAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSS 339
Query: 246 NLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMII 305
+ V A+I+M KCG + A ++F + +D +S+ +++ G+A++GCG +A++LF M+
Sbjct: 340 HYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVD 399
Query: 306 NAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLE 365
+ PD+V F ++ C LV++GL F+ M Y I+ HY+C+V++ R G L+
Sbjct: 400 EGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLK 459
Query: 366 EAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFA 425
EA I+ MP EA S WG+LL C +H N E+ + + + L + S G++ L+SN +A
Sbjct: 460 EAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYA 519
Query: 426 GADRWEDTNKIRDEIRRMGLKKKTGCSWI 454
DRW D +RD++ G+ K G SWI
Sbjct: 520 ALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 146/317 (46%), Gaps = 22/317 (6%)
Query: 67 IFNSVVFPDVVSWTTIISGLSKCGFHKEAID-----MFCGIDVKPNANTLVSVLSACSSL 121
+F V P W +I G S E + M G+ +P+ T V+ CS+
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGL-ARPDEYTFPLVMKVCSNN 123
Query: 122 VSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMI 181
++G ++H LR + ++++ + +DFY +C L S +F +MP+RN VSWT ++
Sbjct: 124 GQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV 183
Query: 182 GGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYD 241
Y + G +EA S+F M E N + ++ L K + + R
Sbjct: 184 VAYVKSGELEEAKSMFDLM-----PERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDI 238
Query: 242 LSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFS 301
+S +++ I+ Y K GD+ A +F D +WS +I G A NG +A ++FS
Sbjct: 239 ISYTSM-----IDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFS 293
Query: 302 LMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQM-QHY--ACVVDMY 358
M V PD+ + L+SACS G + + K S +++ + + HY ++DM
Sbjct: 294 EMCAKNVKPDEFIMVGLMSACSQMGCFE---LCEKVDSYLHQRMNKFSSHYVVPALIDMN 350
Query: 359 GRAGLLEEAEAFIREMP 375
+ G ++ A EMP
Sbjct: 351 AKCGHMDRAAKLFEEMP 367
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 266 bits (679), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 142/411 (34%), Positives = 238/411 (57%), Gaps = 6/411 (1%)
Query: 49 NSLLHFYVTVKDIFSAHQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFC---GIDVK 105
N L++ YV D+ +A ++F+ + + +W +I+GL + F++E + +F G+
Sbjct: 114 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 173
Query: 106 PNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYL 165
P+ TL SV S + L S +G+ IH ++++ E ++++++++ Y+R G L +
Sbjct: 174 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIV 233
Query: 166 FVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISA 225
MP RN+V+W T+I G A+ G C E V +M K PN+ T V VLS+CS ++
Sbjct: 234 IRSMPVRNLVAWNTLIMGNAQNG-CPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 292
Query: 226 LSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVIS 285
G+ +H+ + + S V +++I+MY KCG +G A + F+ +D++ WS++IS
Sbjct: 293 RGQGQQIHAE-AIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMIS 351
Query: 286 GLAMNGCGRQALQLFSLMIINAVFP-DDVTFIALISACSHGGLVDQGLILFKAMSTVYEI 344
+G G +A++LF+ M ++V F+ L+ ACSH GL D+GL LF M Y
Sbjct: 352 AYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGF 411
Query: 345 VPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQ 404
P ++HY CVVD+ GRAG L++AEA IR MPI+ + +W LL+AC IH+N EM R+ +
Sbjct: 412 KPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFK 471
Query: 405 DLVNKKGVSVGTFALMSNTFAGADRWEDTNKIRDEIRRMGLKKKTGCSWIE 455
+++ + L++N A A RW D +++R +R +KK+ G SW E
Sbjct: 472 EILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFE 522
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 164/363 (45%), Gaps = 35/363 (9%)
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGIDVKPNANTLVSVLSACSSLVSHKLGK 128
+SVV P V T I+ L G +EA F +++ N + + +C++ S GK
Sbjct: 6 SSVVRPLSVDPATAIATLCSKGNLREAFQRF-RLNIFTNTSLFTPFIQSCTTRQSLPSGK 64
Query: 129 AIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERG 188
+H + + ++ + N ++ Y + G S ++ +M K+N +S +I GY G
Sbjct: 65 QLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAG 124
Query: 189 FCKEAVSVFQEMEKTKEA------------------------------EPNEATLVNVLS 218
A VF EM K P+E TL +V S
Sbjct: 125 DLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFS 184
Query: 219 ACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKI 278
+ + ++S G+ +H Y + +Y L + +V +++ +MY++ G + V + ++ +
Sbjct: 185 GSAGLRSVSIGQQIHGY-TIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLV 243
Query: 279 SWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAM 338
+W+T+I G A NGC L L+ +M I+ P+ +TF+ ++S+CS + QG + A
Sbjct: 244 AWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQI-HAE 302
Query: 339 STVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIH-RNDE 397
+ + + ++ MY + G L +A E E E +W ++++A H + DE
Sbjct: 303 AIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDE-VMWSSMISAYGFHGQGDE 361
Query: 398 MFD 400
+
Sbjct: 362 AIE 364
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 9/209 (4%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
N TF L +CS + +IHA I+ G + + +SL+ Y + A + F
Sbjct: 276 NKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAF 335
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI----DVKPNANTLVSVLSACSSLVSH 124
+ D V W+++IS G EAI++F + +++ N +++L ACS
Sbjct: 336 SEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLK 395
Query: 125 KLGKAIHAHSLRNLN-ENNIILDNAILDFYIRCGSLASCGYLFVKMP-KRNVVSWTTMIG 182
G + + + + ++D R G L + MP K ++V W T++
Sbjct: 396 DKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLS 455
Query: 183 GYAERGFCKEAVSVFQEMEKTKEAEPNEA 211
+ A VF+E+ + +PN++
Sbjct: 456 ACNIHKNAEMAQRVFKEI---LQIDPNDS 481
>sp|Q9SR01|PP212_ARATH Pentatricopeptide repeat-containing protein At3g04750,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2
SV=1
Length = 661
Score = 263 bits (673), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/485 (31%), Positives = 264/485 (54%), Gaps = 43/485 (8%)
Query: 7 SYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLH-DIFIQNSLLHFYVTVKDIFSAH 65
S + TF +KA S + +IH H+I G L ++ NSL+ FY+ + + A
Sbjct: 130 SPDRQTFLYLMKASSFL---SEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAE 186
Query: 66 QIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSACSSLV 122
++F + PDV S+ +I G +K GF EA+ ++ + ++P+ T++S+L C L
Sbjct: 187 KVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLS 246
Query: 123 SHKLGKAIHAHSLRN--LNENNIILDNAILDFYIRC------------------------ 156
+LGK +H R + +N+IL NA+LD Y +C
Sbjct: 247 DIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTM 306
Query: 157 -------GSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAV-SVFQEMEKTKEAEP 208
G + + +F +MPKR++VSW +++ GY+++G + V +F EM ++ +P
Sbjct: 307 VVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKP 366
Query: 209 NEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQV 268
+ T+V+++S ++ LS G++VH + R L + +A+I+MY KCG + A V
Sbjct: 367 DRVTMVSLISGAANNGELSHGRWVHGLV-IRLQLKGDAFLSSALIDMYCKCGIIERAFMV 425
Query: 269 FNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLV 328
F KD W+++I+GLA +G G+QALQLF M V P++VT +A+++ACSH GLV
Sbjct: 426 FKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLV 485
Query: 329 DQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFI-REMPIEAEWSVWGALL 387
++GL +F M + P+ +HY +VD+ RAG +EEA+ + ++MP+ S+WG++L
Sbjct: 486 EEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSIL 545
Query: 388 NACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGADRWEDTNKIRDEIRRMGLKK 447
+ACR + E + +L+ + G + L+SN +A RW ++K R+ + G+KK
Sbjct: 546 SACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKK 605
Query: 448 KTGCS 452
G S
Sbjct: 606 TAGYS 610
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 263 bits (672), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/454 (33%), Positives = 249/454 (54%), Gaps = 5/454 (1%)
Query: 7 SYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQ 66
S + Y FT L + + +IH I+ G L + + N+L+ Y + + A +
Sbjct: 218 SDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACK 277
Query: 67 IFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSACSSLVS 123
+F+S + ++W+ +++G S+ G EA+ +F + +KP+ T+V VL+ACS +
Sbjct: 278 MFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICY 337
Query: 124 HKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGG 183
+ GK +H+ L+ E ++ A++D Y + G LA F + +R+V WT++I G
Sbjct: 338 LEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISG 397
Query: 184 YAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLS 243
Y + +EA+ +++ M KT PN+ T+ +VL ACSS++ L GK VH + + ++
Sbjct: 398 YVQNSDNEEALILYRRM-KTAGIIPNDPTMASVLKACSSLATLELGKQVHGH-TIKHGFG 455
Query: 244 VSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLM 303
+ +G+A+ MY KCG + VF KD +SW+ +ISGL+ NG G +AL+LF M
Sbjct: 456 LEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEM 515
Query: 304 IINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGL 363
+ + PDDVTF+ +ISACSH G V++G F MS + P++ HYAC+VD+ RAG
Sbjct: 516 LAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQ 575
Query: 364 LEEAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNT 423
L+EA+ FI I+ +W LL+AC+ H E+ + L+ T+ +S
Sbjct: 576 LKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGI 635
Query: 424 FAGADRWEDTNKIRDEIRRMGLKKKTGCSWIEVN 457
+ R D ++ +R G+ K+ GCSWIE+
Sbjct: 636 YTALGRMRDVERVWKHMRANGVSKEVGCSWIELK 669
Score = 165 bits (417), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 200/379 (52%), Gaps = 18/379 (4%)
Query: 24 HPHQKAL----EIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSVVFPDVVSW 79
H Q+ L +H +I G I N L++FY + AH IFN+++ DVVSW
Sbjct: 24 HSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSW 83
Query: 80 TTIISGLSKCGFHKEA---IDMFCGI---DVKPNANTLVSVLSACSSLVSHKLGKAIHAH 133
++I+G S+ G + + +F + D+ PNA TL + A SSL S +G+ HA
Sbjct: 84 NSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHAL 143
Query: 134 SLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEA 193
++ + +I +D +++ Y + G + +F MP+RN +W+TM+ GYA RG +EA
Sbjct: 144 VVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEA 203
Query: 194 VSVFQE-MEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAV 252
+ VF + + +E ++ VLS+ ++ + G+ +H I+ + L + NA+
Sbjct: 204 IKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHC-ITIKNGLLGFVALSNAL 262
Query: 253 INMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDD 312
+ MY KC + A ++F+ ++ I+WS +++G + NG +A++LFS M + P +
Sbjct: 263 VTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSE 322
Query: 313 VTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYA--CVVDMYGRAGLLEEAEAF 370
T + +++ACS +++G L S + ++ + +A +VDMY +AG L +A
Sbjct: 323 YTIVGVLNACSDICYLEEGKQLH---SFLLKLGFERHLFATTALVDMYAKAGCLADARKG 379
Query: 371 IREMPIEAEWSVWGALLNA 389
+ E + ++W +L++
Sbjct: 380 FDCLQ-ERDVALWTSLISG 397
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 183/397 (46%), Gaps = 31/397 (7%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
N YT KA S + HA V++ DI++ SL+ Y + ++F
Sbjct: 117 NAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVF 176
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGIDVKPNANT-----LVSVLSACSSLVS 123
+ + +W+T++SG + G +EAI +F + + +VLS+ ++ +
Sbjct: 177 AYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIY 236
Query: 124 HKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGG 183
LG+ IH +++N + L NA++ Y +C SL +F RN ++W+ M+ G
Sbjct: 237 VGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTG 296
Query: 184 YAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLS 243
Y++ G EAV +F M + +P+E T+V VL+ACS I L GK +HS++ +
Sbjct: 297 YSQNGESLEAVKLFSRM-FSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFL-LKLGFE 354
Query: 244 VSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLM 303
A+++MY K G + A + F+ L +D W+++ISG N +AL L+ M
Sbjct: 355 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Query: 304 IINAVFPDDVTFIALISACS-----------HGGLVDQGLILFKAMSTVYEIVPQMQHYA 352
+ P+D T +++ ACS HG + G L ++ +
Sbjct: 415 KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGL------------EVPIGS 462
Query: 353 CVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNA 389
+ MY + G LE+ R P + S W A+++
Sbjct: 463 ALSTMYSKCGSLEDGNLVFRRTPNKDVVS-WNAMISG 498
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 122/224 (54%), Gaps = 4/224 (1%)
Query: 1 MLSCPSSYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKD 60
M S + YT L ACS ++ ++H+ +++ G +F +L+ Y
Sbjct: 313 MFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGC 372
Query: 61 IFSAHQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGID---VKPNANTLVSVLSA 117
+ A + F+ + DV WT++ISG + ++EA+ ++ + + PN T+ SVL A
Sbjct: 373 LADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKA 432
Query: 118 CSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSW 177
CSSL + +LGK +H H++++ + + +A+ Y +CGSL +F + P ++VVSW
Sbjct: 433 CSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSW 492
Query: 178 TTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACS 221
MI G + G EA+ +F+EM + EP++ T VN++SACS
Sbjct: 493 NAMISGLSHNGQGDEALELFEEM-LAEGMEPDDVTFVNIISACS 535
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 138/284 (48%), Gaps = 36/284 (12%)
Query: 103 DVKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASC 162
++ P+ +TL+ L+ S + G+A+H +R I N +++FY +CG LA
Sbjct: 9 ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKA 68
Query: 163 GYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSV---FQEMEKTKEAEPNEATLVNVLSA 219
+F + ++VVSW ++I GY++ G + +V F+EM + ++ PN TL + A
Sbjct: 69 HSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREM-RAQDILPNAYTLAGIFKA 127
Query: 220 CSSISALSFGKYVHSYI---STRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKD 276
SS+ + + G+ H+ + S+ D+ V +++ MY K G V ++VF + ++
Sbjct: 128 ESSLQSSTVGRQAHALVVKMSSFGDIYVD----TSLVGMYCKAGLVEDGLKVFAYMPERN 183
Query: 277 KISWSTVISGLAMNGCGRQALQLFSLMIINAV--FPDDVTFIALISACS----------- 323
+WST++SG A G +A+++F+L + D F A++S+ +
Sbjct: 184 TYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQI 243
Query: 324 HGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEA 367
H + GL+ F A+S +V MY + L EA
Sbjct: 244 HCITIKNGLLGFVALSNA------------LVTMYSKCESLNEA 275
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 262 bits (670), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 149/470 (31%), Positives = 268/470 (57%), Gaps = 15/470 (3%)
Query: 1 MLSCPSSYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVK- 59
M+ +S N +T + LK+C +H V++ G +++ N++++ Y T
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV 161
Query: 60 DIFSAHQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI-----DVKPNANTLVSV 114
+ +A IF + + V+WTT+I+G + G + M+ + +V P T+
Sbjct: 162 TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA-- 219
Query: 115 LSACSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNV 174
+ A +S+ S GK IHA ++ ++N+ + N+ILD Y RCG L+ + F +M +++
Sbjct: 220 VRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDL 279
Query: 175 VSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHS 234
++W T+I ER EA+ +FQ E ++ PN T ++++AC++I+AL+ G+ +H
Sbjct: 280 ITWNTLISEL-ERSDSSEALLMFQRFE-SQGFVPNCYTFTSLVAACANIAALNCGQQLHG 337
Query: 235 YISTR-YDLSVSNLVGNAVINMYVKCGDVGIAIQVF-NMLAYKDKISWSTVISGLAMNGC 292
I R ++ +V + NA+I+MY KCG++ + +VF ++ ++ +SW++++ G +G
Sbjct: 338 RIFRRGFNKNVE--LANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGY 395
Query: 293 GRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYA 352
G +A++LF M+ + + PD + F+A++SAC H GLV++GL F M + Y I P Y
Sbjct: 396 GAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYN 455
Query: 353 CVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRI-RQDLVNKKG 411
CVVD+ GRAG + EA + MP + + S WGA+L AC+ H+++ + R+ + ++ K
Sbjct: 456 CVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKP 515
Query: 412 VSVGTFALMSNTFAGADRWEDTNKIRDEIRRMGLKKKTGCSWIEVNPSIF 461
VGT+ ++S +A +W D ++R +R MG KK+ G SWI V +F
Sbjct: 516 KMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVF 565
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 180/374 (48%), Gaps = 25/374 (6%)
Query: 43 HDIFIQNSLLHFYVTVKDIFSAHQIFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI 102
H I N L+ Y + A +F+ + DVV+WT +I+G + ++ A + F +
Sbjct: 44 HHILATN-LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEM 102
Query: 103 ---DVKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCG-S 158
PN TL SVL +C ++ G +H ++ E ++ +DNA+++ Y C +
Sbjct: 103 VKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVT 162
Query: 159 LASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLS 218
+ + +F + +N V+WTT+I G+ G + ++++M + AE + +
Sbjct: 163 MEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQM-LLENAEVTPYCITIAVR 221
Query: 219 ACSSISALSFGKYVHSYISTRYDLSVSNL-VGNAVINMYVKCGDVGIAIQVFNMLAYKDK 277
A +SI +++ GK +H+ + R SNL V N+++++Y +CG + A F+ + KD
Sbjct: 222 ASASIDSVTTGKQIHASVIKRG--FQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDL 279
Query: 278 ISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVD-----QGL 332
I+W+T+IS L + +AL +F P+ TF +L++AC++ ++ G
Sbjct: 280 ITWNTLISELERSDSS-EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGR 338
Query: 333 ILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRI 392
I + + E+ ++DMY + G + +++ E+ W +++
Sbjct: 339 IFRRGFNKNVELA------NALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGS 392
Query: 393 H----RNDEMFDRI 402
H E+FD++
Sbjct: 393 HGYGAEAVELFDKM 406
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 136/274 (49%), Gaps = 25/274 (9%)
Query: 140 ENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQE 199
+++I+ N I+ ++ + G + LF +MP R+VV+WT MI GYA + A F E
Sbjct: 43 KHHILATNLIVSYFEK-GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHE 101
Query: 200 MEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKC 259
M K + PNE TL +VL +C ++ L++G VH + + + S V NA++NMY C
Sbjct: 102 MVK-QGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVV-VKLGMEGSLYVDNAMMNMYATC 159
Query: 260 G-DVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIIN--AVFPDDVTFI 316
+ A +F + K+ ++W+T+I+G G G L+++ M++ V P +T
Sbjct: 160 SVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA 219
Query: 317 ----ALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIR 372
A I + + G + +I S +P M ++D+Y R G L EA+ +
Sbjct: 220 VRASASIDSVTTGKQIHASVIKRGFQSN----LPVMN---SILDLYCRCGYLSEAKHYFH 272
Query: 373 EMPIEAEWSVWGALLNACRIHRNDE-----MFDR 401
EM + + W L++ + R+D MF R
Sbjct: 273 EME-DKDLITWNTLIS--ELERSDSSEALLMFQR 303
>sp|O22137|PP202_ARATH Pentatricopeptide repeat-containing protein At2g45350,
chloroplastic OS=Arabidopsis thaliana GN=CRR4 PE=3 SV=2
Length = 613
Score = 262 bits (669), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/486 (30%), Positives = 254/486 (52%), Gaps = 36/486 (7%)
Query: 7 SYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQ 66
S + ++ + LKACS + ++IH + + G D+F+QN L+ Y+ + + Q
Sbjct: 118 SVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQ 177
Query: 67 IFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGIDVKP-NANTLVSVLSACSSLVSHK 125
+F+ + D VS+ ++I G KCG A ++F D+ P L+S S S
Sbjct: 178 MFDRMPKRDSVSYNSMIDGYVKCGLIVSARELF---DLMPMEMKNLISWNSMISGYAQTS 234
Query: 126 LGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYA 185
G I + ++ E ++I N+++D Y++ G + LF MP+R+VV+W TMI GYA
Sbjct: 235 DGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYA 294
Query: 186 ERGFCK-------------------------------EAVSVFQEMEKTKEAEPNEATLV 214
+ GF EA+ +F +MEK P++ TLV
Sbjct: 295 KLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLV 354
Query: 215 NVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAY 274
VL A + + LS +H YI + + +G A+I+MY KCG + A+ VF +
Sbjct: 355 IVLPAIAQLGRLSKAIDMHLYIVEK-QFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIEN 413
Query: 275 KDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLIL 334
K W+ +I GLA++G G A + + ++ PDD+TF+ +++ACSH GLV +GL+
Sbjct: 414 KSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLC 473
Query: 335 FKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIHR 394
F+ M ++I P++QHY C+VD+ R+G +E A+ I EMP+E +W L AC H+
Sbjct: 474 FELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHK 533
Query: 395 NDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGADRWEDTNKIRDEIRRMGLKKKTGCSWI 454
E + + + L+ + G + ++ L+SN +A W+D ++R ++ ++K GCSWI
Sbjct: 534 EFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 593
Query: 455 EVNPSI 460
E++ +
Sbjct: 594 ELDGRV 599
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 262 bits (669), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 144/452 (31%), Positives = 248/452 (54%), Gaps = 5/452 (1%)
Query: 12 TFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSV 71
T + L+AC A I+ ++++ G + + ++N L+ Y D+ +A +FNS+
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 368
Query: 72 VFPDVVSWTTIISGLSKCGFHKEAIDMF---CGIDVKPNANTLVSVLSACSSLVSHKLGK 128
D VSW +IISG + G EA+ +F ++ + + T + ++S + L K GK
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGK 428
Query: 129 AIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERG 188
+H++ +++ ++ + NA++D Y +CG + +F M + V+W T+I G
Sbjct: 429 GLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFG 488
Query: 189 FCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLV 248
+ V +M K+ E P+ AT + L C+S++A GK +H + R+ +
Sbjct: 489 DFATGLQVTTQMRKS-EVVPDMATFLVTLPMCASLAAKRLGKEIHCCL-LRFGYESELQI 546
Query: 249 GNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAV 308
GNA+I MY KCG + + +VF ++ +D ++W+ +I M G G +AL+ F+ M + +
Sbjct: 547 GNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGI 606
Query: 309 FPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAE 368
PD V FIA+I ACSH GLVD+GL F+ M T Y+I P ++HYACVVD+ R+ + +AE
Sbjct: 607 VPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAE 666
Query: 369 AFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGAD 428
FI+ MPI+ + S+W ++L ACR + E +R+ + ++ G L SN +A
Sbjct: 667 EFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALR 726
Query: 429 RWEDTNKIRDEIRRMGLKKKTGCSWIEVNPSI 460
+W+ + IR ++ + K G SWIEV ++
Sbjct: 727 KWDKVSLIRKSLKDKHITKNPGYSWIEVGKNV 758
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 211/398 (53%), Gaps = 30/398 (7%)
Query: 7 SYNHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQ 66
S + YTF +KAC+ + ++ +++ G D+F+ N+L+ Y + + A Q
Sbjct: 103 SPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQ 162
Query: 67 IFNSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGID---VKPNANTLVSVLSACSSLVS 123
+F+ + D+VSW ++ISG S G+++EA++++ + + P++ T+ SVL A +L+
Sbjct: 163 VFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLV 222
Query: 124 HKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGG 183
K G+ +H +L++ + ++++N ++ Y++ +F +M R+ VS+ TMI G
Sbjct: 223 VKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICG 282
Query: 184 YAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLS 243
Y + +E+V +F +E + +P+ T+ +VL AC + LS KY+++Y+ +
Sbjct: 283 YLKLEMVEESVRMF--LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYM-LKAGFV 339
Query: 244 VSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLM 303
+ + V N +I++Y KCGD+ A VFN + KD +SW+++ISG +G +A++LF +M
Sbjct: 340 LESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMM 399
Query: 304 IINAVFPDDVTFIALISACS-----------HGGLVDQGLILFKAMSTVYEIVPQMQHYA 352
+I D +T++ LIS + H + G+ + ++S
Sbjct: 400 MIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNA----------- 448
Query: 353 CVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNAC 390
++DMY + G + ++ M + W +++AC
Sbjct: 449 -LIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVISAC 484
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 155/298 (52%), Gaps = 7/298 (2%)
Query: 31 EIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSV-VFPDVVSWTTIISGLSKC 89
IHA VI G F L+ Y ++ S+ +F V +V W +II SK
Sbjct: 25 RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKN 84
Query: 90 GFHKEAIDMFCGI---DVKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILD 146
G EA++ + + V P+ T SV+ AC+ L ++G ++ L E+++ +
Sbjct: 85 GLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVG 144
Query: 147 NAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEA 206
NA++D Y R G L +F +MP R++VSW ++I GY+ G+ +EA+ ++ E+ K
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL-KNSWI 203
Query: 207 EPNEATLVNVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAI 266
P+ T+ +VL A ++ + G+ +H + + + ++ +V N ++ MY+K A
Sbjct: 204 VPDSFTVSSVLPAFGNLLVVKQGQGLHGF-ALKSGVNSVVVVNNGLVAMYLKFRRPTDAR 262
Query: 267 QVFNMLAYKDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSH 324
+VF+ + +D +S++T+I G +++++F L ++ PD +T +++ AC H
Sbjct: 263 RVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF-LENLDQFKPDLLTVSSVLRACGH 319
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 116/224 (51%), Gaps = 15/224 (6%)
Query: 119 SSLVSHKLGKAIHAHSLRNLN--------ENNIILDNAILDFYIRCGSLASCGYLFVKM- 169
S +S L + + + LR ++ +++ ++D Y AS +F ++
Sbjct: 7 SPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 170 PKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFG 229
P +NV W ++I +++ G EA+ + ++ ++K P++ T +V+ AC+ + G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESK-VSPDKYTFPSVIKACAGLFDAEMG 125
Query: 230 KYVHSYISTRYDLSVSN--LVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGL 287
V+ I D+ + VGNA+++MY + G + A QVF+ + +D +SW+++ISG
Sbjct: 126 DLVYEQI---LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGY 182
Query: 288 AMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQG 331
+ +G +AL+++ + + + PD T +++ A + +V QG
Sbjct: 183 SSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 262 bits (669), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 150/483 (31%), Positives = 249/483 (51%), Gaps = 36/483 (7%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
+ ++F LKA S + +E+H + L D F++ + Y + I A +F
Sbjct: 110 DQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVF 169
Query: 69 NSVVFPDVVSWTTIISGLSKCGFHKEAIDMFCGI---DVKPNANTLVSVLSACSSLVSHK 125
+ + DVV+W T+I + G EA +F + +V P+ L +++SAC + +
Sbjct: 170 DEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMR 229
Query: 126 LGKAIH-----------AHSL--------------------RNLNENNIILDNAILDFYI 154
+AI+ H L R ++ N+ + A++ Y
Sbjct: 230 YNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYS 289
Query: 155 RCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLV 214
+CG L +F + K+++V WTTMI Y E + +EA+ VF+EM +P+ ++
Sbjct: 290 KCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM-CCSGIKPDVVSMF 348
Query: 215 NVLSACSSISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAY 274
+V+SAC+++ L K+VHS I L + NA+INMY KCG + VF +
Sbjct: 349 SVISACANLGILDKAKWVHSCIHVN-GLESELSINNALINMYAKCGGLDATRDVFEKMPR 407
Query: 275 KDKISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLIL 334
++ +SWS++I+ L+M+G AL LF+ M V P++VTF+ ++ CSH GLV++G +
Sbjct: 408 RNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKI 467
Query: 335 FKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIHR 394
F +M+ Y I P+++HY C+VD++GRA LL EA I MP+ + +WG+L++ACRIH
Sbjct: 468 FASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
Query: 395 NDEMFDRIRQDLVNKKGVSVGTFALMSNTFAGADRWEDTNKIRDEIRRMGLKKKTGCSWI 454
E+ + ++ + G LMSN +A RWED IR + + K+ G S I
Sbjct: 528 ELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRI 587
Query: 455 EVN 457
+ N
Sbjct: 588 DQN 590
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 123/274 (44%), Gaps = 15/274 (5%)
Query: 108 ANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILDNAILDFYIRCGSLASCGYLF- 166
ANT++ LS C SL +H K +HAH LR + + + N+ L S + Y
Sbjct: 12 ANTILEKLSFCKSL-NHI--KQLHAHILRTVINHKL---NSFLFNLSVSSSSINLSYALN 65
Query: 167 ----VKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSS 222
+ P ++V + + + + + +Q + ++ + + +L A S
Sbjct: 66 VFSSIPSPPESIV-FNPFLRDLSRSSEPRATILFYQRIRHVG-GRLDQFSFLPILKAVSK 123
Query: 223 ISALSFGKYVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWST 282
+SAL G +H ++ + V ++MY CG + A VF+ ++++D ++W+T
Sbjct: 124 VSALFEGMELHG-VAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 283 VISGLAMNGCGRQALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVY 342
+I G +A +LF M + V PD++ ++SAC G + +++ +
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL-IEN 241
Query: 343 EIVPQMQHYACVVDMYGRAGLLEEAEAFIREMPI 376
++ +V MY AG ++ A F R+M +
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSV 275
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 261 bits (668), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 154/526 (29%), Positives = 265/526 (50%), Gaps = 75/526 (14%)
Query: 9 NHYTFTQALKACSLAHPHQKALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 68
+ + K C+ + +IH G D F+Q S+ H Y+ + A ++F
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 69 NSVVFPDVV-----------------------------------SWTTIISGLSKCGFHK 93
+ + DVV SW I+SG ++ G+HK
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234
Query: 94 EAIDMFCGI---DVKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNIILDNAIL 150
EA+ MF I P+ T+ SVL + +G+ IH + ++ + + +A++
Sbjct: 235 EAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMI 294
Query: 151 DFYIRCGSLASCGYLFVKMP-----------------------------------KRNVV 175
D Y + G + LF + + NVV
Sbjct: 295 DMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVV 354
Query: 176 SWTTMIGGYAERGFCKEAVSVFQEMEKTKEAEPNEATLVNVLSACSSISALSFGKYVHSY 235
SWT++I G A+ G EA+ +F+EM+ +PN T+ ++L AC +I+AL G+ H +
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQ-VAGVKPNHVTIPSMLPACGNIAALGHGRSTHGF 413
Query: 236 ISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLAYKDKISWSTVISGLAMNGCGRQ 295
+ R L + VG+A+I+MY KCG + ++ VFNM+ K+ + W+++++G +M+G ++
Sbjct: 414 -AVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKE 472
Query: 296 ALQLFSLMIINAVFPDDVTFIALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVV 355
+ +F ++ + PD ++F +L+SAC GL D+G FK MS Y I P+++HY+C+V
Sbjct: 473 VMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMV 532
Query: 356 DMYGRAGLLEEAEAFIREMPIEAEWSVWGALLNACRIHRNDEMFDRIRQDLVNKKGVSVG 415
++ GRAG L+EA I+EMP E + VWGALLN+CR+ N ++ + + L + + + G
Sbjct: 533 NLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPG 592
Query: 416 TFALMSNTFAGADRWEDTNKIRDEIRRMGLKKKTGCSWIEVNPSIF 461
T+ L+SN +A W + + IR+++ +GLKK GCSWI+V ++
Sbjct: 593 TYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVY 638
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 191/438 (43%), Gaps = 75/438 (17%)
Query: 28 KALEIHAHVIEYGHLHDIFIQNSLLHFYVTVKDIFSAHQIFNSVVFPDVVSWTTIISGLS 87
K + HA +++ G +D +I L+ Y A + S+ P + S++++I L+
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 88 KCGFHKEAIDMFCGI---DVKPNANTLVSVLSACSSLVSHKLGKAIHAHSLRNLNENNII 144
K ++I +F + + P+++ L ++ C+ L + K+GK IH S + + +
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 145 LDNAILDFYIRCGSLASCGYLFVKMPKRNVVSWTTMIGGYAERGFCKEAVSVFQEMEKT- 203
+ ++ Y+RCG + +F +M ++VV+ + ++ YA +G +E V + EME +
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 204 ---------------------KEAE------------PNEATLVNVLSACSSISALSFGK 230
KEA P++ T+ +VL + L+ G+
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 231 YVHSYISTRYDLSVSNLVGNAVINMYVKCGDVGIAIQVFNMLA----------------- 273
+H Y+ + L V +A+I+MY K G V I +FN
Sbjct: 273 LIHGYV-IKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 274 ------------YKDK------ISWSTVISGLAMNGCGRQALQLFSLMIINAVFPDDVTF 315
+K++ +SW+++I+G A NG +AL+LF M + V P+ VT
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 316 IALISACSHGGLVDQGLILFKAMSTVYEIVPQMQHYACVVDMYGRAGLLEEAEAFIREMP 375
+++ AC + + G V+ ++ + + ++DMY + G + ++ MP
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450
Query: 376 IEAEWSVWGALLNACRIH 393
+ W +L+N +H
Sbjct: 451 TK-NLVCWNSLMNGFSMH 467
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 166,637,302
Number of Sequences: 539616
Number of extensions: 6675555
Number of successful extensions: 24881
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 289
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 18762
Number of HSP's gapped (non-prelim): 1730
length of query: 461
length of database: 191,569,459
effective HSP length: 121
effective length of query: 340
effective length of database: 126,275,923
effective search space: 42933813820
effective search space used: 42933813820
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)