BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>038307
MGTLTASSTIPMTRDVSNYDEVAMQQSLLFSDSLKDLKNLRTQLYSAAEYFELSYTNDDQ
KQIVVETLKDYAVKALVNTVDHLGSVTYKVNDILDEKVDEVLDTEHRVSCIEQRLRTCQE
YIDHEGLSQQSLVINTPKYHKRYILPVKYIGCSLDDEDDWHQFRNAVRATITETPRETPR
ETPASSVRKGRSPSPSPRPPQRSATFSFTSTMPKKDQDKRTVSPHRFPLLRSGSISNRPK
IPNAGRPMTPNSSRPTTPNASDAKRRYPSEPRKSYSMRMPAERENCKDFEQHPSKSKRLL
KALLSRRKSKKDDMLYTYLDEY

High Scoring Gene Products

Symbol, full name Information P value
ABIL3
AT5G24310
protein from Arabidopsis thaliana 1.0e-84
ABIL2
AT3G49290
protein from Arabidopsis thaliana 2.8e-82
ABIL4
AT5G42030
protein from Arabidopsis thaliana 5.2e-33
ABIL1
ABI-1-like 1
protein from Arabidopsis thaliana 1.5e-28

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038307
        (322 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2169759 - symbol:ABIL3 "AT5G24310" species:370...   593  1.0e-84   2
TAIR|locus:2082941 - symbol:ABIL2 "AT3G49290" species:370...   825  2.8e-82   1
TAIR|locus:2165730 - symbol:ABIL4 "AT5G42030" species:370...   360  5.2e-33   1
TAIR|locus:505006318 - symbol:ABIL1 "ABI-1-like 1" specie...   318  1.5e-28   1


>TAIR|locus:2169759 [details] [associations]
            symbol:ABIL3 "AT5G24310" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0010090 "trichome morphogenesis"
            evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
            [GO:0048364 "root development" evidence=IMP] GO:GO:0005737
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0010090 GO:GO:0015630
            GO:GO:0048364 eggNOG:NOG323307 HOGENOM:HOG000237953
            ProtClustDB:CLSN2684235 EMBL:AY817014 EMBL:AB006701 EMBL:BT011734
            EMBL:AK222217 EMBL:DQ132115 EMBL:DQ132116 EMBL:DQ132117
            EMBL:DQ132118 EMBL:DQ132119 EMBL:DQ132120 EMBL:DQ132121
            EMBL:DQ132122 EMBL:DQ132123 EMBL:DQ132124 EMBL:DQ132125
            EMBL:DQ132126 EMBL:DQ132127 EMBL:DQ132128 EMBL:DQ132129
            EMBL:DQ132113 EMBL:DQ132114 IPI:IPI00527487 RefSeq:NP_197819.2
            UniGene:At.30967 ProteinModelPortal:Q6NMC6 IntAct:Q6NMC6
            STRING:Q6NMC6 PRIDE:Q6NMC6 EnsemblPlants:AT5G24310.1 GeneID:832498
            KEGG:ath:AT5G24310 TAIR:At5g24310 InParanoid:Q6NMC6 OMA:DDEDDWH
            PhylomeDB:Q6NMC6 Genevestigator:Q6NMC6 Uniprot:Q6NMC6
        Length = 321

 Score = 593 (213.8 bits), Expect = 1.0e-84, Sum P(2) = 1.0e-84
 Identities = 119/176 (67%), Positives = 136/176 (77%)

Query:     4 LTASSTIPMTRDVSNYDEVAMQQXXXXXXXXXXXXXXRTQLYSAAEYFELSYTNDDQKQI 63
             ++A++T+PM R+ SNYDE++MQQ              RTQLYSAAEYFELSYTND+QKQI
Sbjct:     1 MSAAATMPMPREASNYDEISMQQSMLFSDSLKDLKNLRTQLYSAAEYFELSYTNDEQKQI 60

Query:    64 VVETLKDYAVKALVNTVDHLGSVTYKVNDILDEKVDEVLDTEHRVSCIEQRLRTCQEYID 123
             VVETLKDYA+KALVNTVDHLGSVTYKVND +DEKVDEV  TE RVSCIEQRLR CQEY+D
Sbjct:    61 VVETLKDYAIKALVNTVDHLGSVTYKVNDFVDEKVDEVAGTELRVSCIEQRLRMCQEYMD 120

Query:   124 HEGLSQQSLVINTPKYHKRYILP------------VKYIGCSLDDEDDWHQFRNAV 167
             HEG SQQSLVI+TPK+HKRY LP            +K +  S D EDDW+QFRNAV
Sbjct:   121 HEGRSQQSLVIDTPKFHKRYFLPSGEIKRGGNLAKLKNVEGSFDGEDDWNQFRNAV 176

 Score = 274 (101.5 bits), Expect = 1.0e-84, Sum P(2) = 1.0e-84
 Identities = 63/123 (51%), Positives = 75/123 (60%)

Query:   204 ATFSFTS--TMPKKDQDKRTVSPHRFPLLRSGSISNRPKIPNAGRPMTPNSSRPTTPNAS 261
             ATFSF+S  T PKK+QDKR VSPHRFPLLRSGS++ RP   +  RP TP+ SR  TP   
Sbjct:   205 ATFSFSSIATAPKKEQDKRAVSPHRFPLLRSGSVAIRPS--SISRPTTPSKSRAVTPTP- 261

Query:   262 DAKRRYPSEPRKSYSMRMPAERENCKDFE--QHPXXXXXXXXXXXXXXXXXXDDMLYTYL 319
                +RYPSEPR+S S+R+  E+E  K+ E  Q P                  DD LYTYL
Sbjct:   262 ---KRYPSEPRRSASVRVAFEKEAQKEPEHQQQPSKSKRLLKALLSRRKTKKDDTLYTYL 318

Query:   320 DEY 322
             DEY
Sbjct:   319 DEY 321


>TAIR|locus:2082941 [details] [associations]
            symbol:ABIL2 "AT3G49290" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] GO:GO:0005737 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0005856 EMBL:AL132956 EMBL:AY817013 EMBL:AK118112
            IPI:IPI00532333 IPI:IPI00886503 PIR:T45834 RefSeq:NP_001030832.1
            RefSeq:NP_190498.1 UniGene:At.35626 ProteinModelPortal:Q9M3A3
            IntAct:Q9M3A3 STRING:Q9M3A3 PRIDE:Q9M3A3 EnsemblPlants:AT3G49290.1
            EnsemblPlants:AT3G49290.2 GeneID:824090 KEGG:ath:AT3G49290
            TAIR:At3g49290 eggNOG:NOG323307 HOGENOM:HOG000237953
            InParanoid:Q9M3A3 OMA:TRKSASI PhylomeDB:Q9M3A3
            ProtClustDB:CLSN2684235 Genevestigator:Q9M3A3 Uniprot:Q9M3A3
        Length = 312

 Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
 Identities = 181/326 (55%), Positives = 208/326 (63%)

Query:    10 IPMTRDVSNYDEVAMQQXXXXXXXXXXXXXXRTQLYSAAEYFELSYTNDDQKQIVVETLK 69
             +P + + SNYDEV+MQQ              R QLYSAAEYFELSYT DD+KQIVVETLK
Sbjct:     1 MPASHEASNYDEVSMQQSMLFSDGLQDLKNLRAQLYSAAEYFELSYTTDDKKQIVVETLK 60

Query:    70 DYAVKALVNTVDHLGSVTYKVNDILDEKVDEVLDTEHRVSCIEQRLRTCQEYIDHEGLSQ 129
             DYAVKALVNTVDHLGSVTYKVND +DEKVDEV +TE RVSCIEQRLR CQEY+DHEG SQ
Sbjct:    61 DYAVKALVNTVDHLGSVTYKVNDFIDEKVDEVSETELRVSCIEQRLRMCQEYMDHEGRSQ 120

Query:   130 QSLVINTPKYHKRYILP------------VKYIGCSLDDEDDWHQFRNAVXXXXXXXXXX 177
             QSLVI+TPK+HKRYILP            +KY G SL+D DDW+QFRNAV          
Sbjct:   121 QSLVIDTPKFHKRYILPAGEIMTATNLEKLKYFGSSLEDADDWNQFRNAVRATIRETPPP 180

Query:   178 XXXXXXXXXXXXXXXXXXXXXXXXXXATFSFTSTMPKKDQDKRTVSPHRFPLLRSGSISN 237
                                       ATFSFTST+PKK+QDKR+VSPHRFPLLRSGS++ 
Sbjct:   181 PVRKSTSQSSSPRQPPQRS-------ATFSFTSTIPKKEQDKRSVSPHRFPLLRSGSVAT 233

Query:   238 RPKIPNAGRPMTPNSSRPTTPNASDAKRRYPSEPRKSYSMRMPAERENCKDFEQH-PXXX 296
             R K  +  RP TP+ SR  TP       RYPSEPR+S S+R+  E++N K+ EQ  P   
Sbjct:   234 R-KSASISRPTTPSKSRSITPI------RYPSEPRRSASVRVAFEKDNQKETEQQQPSKS 286

Query:   297 XXXXXXXXXXXXXXXDDMLYTYLDEY 322
                            DD LYT+LDEY
Sbjct:   287 KRLLKALLSRRKTKKDDTLYTFLDEY 312


>TAIR|locus:2165730 [details] [associations]
            symbol:ABIL4 "AT5G42030" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0010090 "trichome morphogenesis" evidence=RCA]
            [GO:0045010 "actin nucleation" evidence=RCA] GO:GO:0005737
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005856
            HOGENOM:HOG000237953 EMBL:AK176699 EMBL:AB017067 EMBL:AY084395
            EMBL:AK175528 EMBL:AK175563 EMBL:AK176912 EMBL:AY817015
            IPI:IPI00541752 RefSeq:NP_199018.1 UniGene:At.43834
            ProteinModelPortal:Q9FHY1 IntAct:Q9FHY1 STRING:Q9FHY1
            EnsemblPlants:AT5G42030.1 GeneID:834208 KEGG:ath:AT5G42030
            TAIR:At5g42030 eggNOG:NOG317234 InParanoid:Q9FHY1 OMA:NINNRTP
            PhylomeDB:Q9FHY1 ProtClustDB:CLSN2916256 Genevestigator:Q9FHY1
            GermOnline:AT5G42030 Uniprot:Q9FHY1
        Length = 279

 Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
 Identities = 91/253 (35%), Positives = 123/253 (48%)

Query:    17 SNYDEVAMQQXXXXXXXXXXXXXXRTQLYSAAEYFELSYTNDDQKQIVVETLKDYAVKAL 76
             SN+DE+ M+Q              R QLYSAAEYFE SY   + K+ V+ETLK+YA KA+
Sbjct:    15 SNHDELFMKQTLQFSETLKDLKNLRKQLYSAAEYFETSYGKAEHKETVIETLKEYAAKAV 74

Query:    77 VNTVDHLGSVTYKVNDILDEKVDEVLDTEHRVSCIEQRLRTCQEYIDHEGLSQQSLVINT 136
             VNTVDHLGSV+ K N  L +       T  R+S +EQR+R C++Y+   G  Q  L+   
Sbjct:    75 VNTVDHLGSVSDKFNSFLSDNSTHFSTTHLRLSSLEQRMRLCRDYMGKSGTHQHLLLFQY 134

Query:   137 PKYHKRYILPVKYIGCSLDDEDDWHQFRNAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 196
             P++HKRY  P +  G S    DD H+F +AV                             
Sbjct:   135 PRHHKRYFFPQQGRGTSFSAGDDSHRFTSAVRSTILENLPNTARKANKT----------- 183

Query:   197 XXXXXXXATFSFT----STMPKKDQDKRTVSPHRFPLLRSGSISNRPKIPNAGRPMTPNS 252
                     +FSF     + +  +  +KR+ SP RFPLLRSGS+  R   P+  +P  P  
Sbjct:   184 -------GSFSFAPIVHNNINNRTPNKRSNSPMRFPLLRSGSLLKRSSSPS--QPKKPPL 234

Query:   253 SRPTTPNASDAKR 265
             + P    A    R
Sbjct:   235 ALPEPQRAISVSR 247


>TAIR|locus:505006318 [details] [associations]
            symbol:ABIL1 "ABI-1-like 1" species:3702 "Arabidopsis
            thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0010090
            "trichome morphogenesis" evidence=RCA;TAS] [GO:0045010 "actin
            nucleation" evidence=RCA;TAS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0031209 "SCAR complex" evidence=TAS]
            EMBL:CP002685 GO:GO:0010090 GO:GO:0031209 HOGENOM:HOG000237953
            GO:GO:0045010 EMBL:AC005397 IPI:IPI00892210 RefSeq:NP_001118534.1
            UniGene:At.28094 UniGene:At.69835 ProteinModelPortal:B3H5V3
            SMR:B3H5V3 STRING:B3H5V3 DNASU:819230 EnsemblPlants:AT2G46225.2
            GeneID:819230 KEGG:ath:AT2G46225 TAIR:At2g46225 OMA:QKAPLRT
            PhylomeDB:B3H5V3 ProtClustDB:CLSN2917341 Genevestigator:B3H5V3
            Uniprot:B3H5V3
        Length = 329

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 63/135 (46%), Positives = 83/135 (61%)

Query:    12 MTRDVSNYDEVAMQQXXXXXXXXXXXXXXRTQLYSAAEYFELSYTNDDQKQIVVETLKDY 71
             M       DEV+M++              R QLYSAA+Y E SY + +QKQ+V++ LKDY
Sbjct:     8 MDNPAMTLDEVSMERNKSFVKALQELKNLRPQLYSAADYCEKSYLHSEQKQMVLDNLKDY 67

Query:    72 AVKALVNTVDHLGSVTYKVNDILDEKVDEVLDTEHRVSCIEQRLRTCQEYIDHEGLSQQS 131
              VKALVN VDHLG+V  K+ D+ D +  ++   E R SC+ Q+L TC+ YID EGL QQ 
Sbjct:    68 TVKALVNAVDHLGTVASKLTDLFDHQNSDISTMEMRASCVSQQLLTCRTYIDKEGLRQQQ 127

Query:   132 LVINTPKYHKRYILP 146
             L+   P +HK YILP
Sbjct:   128 LLAVIPLHHKHYILP 142


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.130   0.379    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      322       254   0.00084  114 3  11 23  0.49    33
                                                     32  0.47    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  198 KB (2112 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.85u 0.15s 25.00t   Elapsed:  00:00:01
  Total cpu time:  24.85u 0.15s 25.00t   Elapsed:  00:00:01
  Start:  Sat May 11 00:54:41 2013   End:  Sat May 11 00:54:42 2013

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