BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038311
(207 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2GEZ|B Chain B, Crystal Structure Of Potassium-Independent Plant
Asparaginase
pdb|2GEZ|D Chain D, Crystal Structure Of Potassium-Independent Plant
Asparaginase
pdb|2GEZ|F Chain F, Crystal Structure Of Potassium-Independent Plant
Asparaginase
pdb|2GEZ|H Chain H, Crystal Structure Of Potassium-Independent Plant
Asparaginase
Length = 133
Score = 198 bits (503), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/124 (77%), Positives = 107/124 (86%)
Query: 21 SKGNLATATSIGGMVNKMVGKIGDTPIIGSGTYANNLCAVSATGKGEAIIRHTVARDVAA 80
S GNLA+ATS GG+VNKMVG+IGDTP+IG+GTYAN LCAVSATGKGE IIR TVARDVAA
Sbjct: 9 SHGNLASATSTGGLVNKMVGRIGDTPLIGAGTYANELCAVSATGKGEEIIRATVARDVAA 68
Query: 81 VMEFKGLSLKEASGCVIEECVPRGNVGLIVVSASSEVTMPFNTTGMFRACATEDGYSHIG 140
+MEFKGLSLKEA+ VI E P+G VGLI VSA+ E+ MPFNTTGMFRACATEDGYS I
Sbjct: 69 LMEFKGLSLKEAADFVIHERTPKGTVGLIAVSAAGEIAMPFNTTGMFRACATEDGYSEIA 128
Query: 141 IWTS 144
IW +
Sbjct: 129 IWPT 132
>pdb|2ZAK|A Chain A, Orthorhombic Crystal Structure Of Precursor E. Coli
Isoaspartyl PeptidaseL-Asparaginase (Ecaiii) With
Active-Site T179a Mutation
pdb|2ZAK|B Chain B, Orthorhombic Crystal Structure Of Precursor E. Coli
Isoaspartyl PeptidaseL-Asparaginase (Ecaiii) With
Active-Site T179a Mutation
pdb|3C17|A Chain A, Hexagonal Crystal Structure Of Precursor E. Coli
Isoaspartyl Peptidase/l-asparaginase (ecaiii) With
Active-site T179a Mutation
pdb|3C17|B Chain B, Hexagonal Crystal Structure Of Precursor E. Coli
Isoaspartyl Peptidase/l-asparaginase (ecaiii) With
Active-site T179a Mutation
Length = 320
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 78/124 (62%), Gaps = 3/124 (2%)
Query: 22 KGNLATATSIGGMVNKMVGKIGDTPIIGSGTYANNL-CAVSATGKGEAIIRHTVARDVAA 80
GNLA ATS GGM NK+ G++GD+P++G+G YANN AVS TG GE IR A D+AA
Sbjct: 187 DGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIRALAAYDIAA 246
Query: 81 VMEFKGLSLKEASGCVIEECVPR--GNVGLIVVSASSEVTMPFNTTGMFRACATEDGYSH 138
+M++ GLSL EA V+ E +P G+ GLI + V +PFNT GM+RA
Sbjct: 247 LMDYGGLSLAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYRAWGYAGDTPT 306
Query: 139 IGIW 142
GI+
Sbjct: 307 TGIY 310
>pdb|1T3M|B Chain B, Structure Of The Isoaspartyl Peptidase With L-Asparaginase
Activity From E. Coli
pdb|1T3M|D Chain D, Structure Of The Isoaspartyl Peptidase With L-Asparaginase
Activity From E. Coli
Length = 147
Score = 110 bits (274), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 75/111 (67%), Gaps = 3/111 (2%)
Query: 22 KGNLATATSIGGMVNKMVGKIGDTPIIGSGTYANNL-CAVSATGKGEAIIRHTVARDVAA 80
GNLA ATS GGM NK+ G++GD+P++G+G YANN AVS TG GE IR A D+AA
Sbjct: 10 DGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIRALAAYDIAA 69
Query: 81 VMEFKGLSLKEASGCVIEECVPR--GNVGLIVVSASSEVTMPFNTTGMFRA 129
+M++ GLSL EA V+ E +P G+ GLI + V +PFNT GM+RA
Sbjct: 70 LMDYGGLSLAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYRA 120
>pdb|1JN9|B Chain B, Structure Of Putative Asparaginase Encoded By Escherichia
Coli Ybik Gene
pdb|1JN9|D Chain D, Structure Of Putative Asparaginase Encoded By Escherichia
Coli Ybik Gene
pdb|1K2X|B Chain B, Crystal Structure Of Putative Asparaginase Encoded By
Escherichia Coli Ybik Gene
pdb|1K2X|D Chain D, Crystal Structure Of Putative Asparaginase Encoded By
Escherichia Coli Ybik Gene
Length = 143
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 75/111 (67%), Gaps = 3/111 (2%)
Query: 22 KGNLATATSIGGMVNKMVGKIGDTPIIGSGTYANNL-CAVSATGKGEAIIRHTVARDVAA 80
GNLA ATS GGM NK+ G++GD+P++G+G YANN AVS TG GE IR A D+AA
Sbjct: 10 DGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIRALAAYDIAA 69
Query: 81 VMEFKGLSLKEASGCVIEECVPR--GNVGLIVVSASSEVTMPFNTTGMFRA 129
+M++ GLSL EA V+ E +P G+ GLI + V +PFNT GM+RA
Sbjct: 70 LMDYGGLSLAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYRA 120
>pdb|2ZAL|B Chain B, Crystal Structure Of E. Coli Isoaspartyl
AminopeptidaseL-Asparaginase In Complex With L-Aspartate
pdb|2ZAL|D Chain D, Crystal Structure Of E. Coli Isoaspartyl
AminopeptidaseL-Asparaginase In Complex With L-Aspartate
Length = 137
Score = 109 bits (273), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 75/111 (67%), Gaps = 3/111 (2%)
Query: 22 KGNLATATSIGGMVNKMVGKIGDTPIIGSGTYANNL-CAVSATGKGEAIIRHTVARDVAA 80
GNLA ATS GGM NK+ G++GD+P++G+G YANN AVS TG GE IR A D+AA
Sbjct: 10 DGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIRALAAYDIAA 69
Query: 81 VMEFKGLSLKEASGCVIEECVPR--GNVGLIVVSASSEVTMPFNTTGMFRA 129
+M++ GLSL EA V+ E +P G+ GLI + V +PFNT GM+RA
Sbjct: 70 LMDYGGLSLAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYRA 120
>pdb|4GDT|A Chain A, Crystal Structure Of Malonate-Bound Human L-Asparaginase
Protein
pdb|4GDT|B Chain B, Crystal Structure Of Malonate-Bound Human L-Asparaginase
Protein
pdb|4GDU|A Chain A, Crystal Structure Of Sulfate-Bound Human L-Asparaginase
Protein
pdb|4GDU|B Chain B, Crystal Structure Of Sulfate-Bound Human L-Asparaginase
Protein
pdb|4GDV|A Chain A, Crystal Structure Of Partially-Cleaved Human
L-Asparaginase Protein In Complex With L-Aspartate
pdb|4GDV|B Chain B, Crystal Structure Of Partially-Cleaved Human
L-Asparaginase Protein In Complex With L-Aspartate
pdb|4GDW|A Chain A, Crystal Structure Of Fully-Cleaved Human L-Asparaginase
Protein In Complex With L-Aspartate
pdb|4GDW|B Chain B, Crystal Structure Of Fully-Cleaved Human L-Asparaginase
Protein In Complex With L-Aspartate
Length = 310
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 79/123 (64%), Gaps = 5/123 (4%)
Query: 22 KGNLATATSIGGMVNKMVGKIGDTPIIGSGTYA-NNLCAVSATGKGEAIIRHTVARDVAA 80
KGN+A ATS GG+VNKMVG++GD+P +G+G YA N++ AVS TG GE+I++ +AR
Sbjct: 179 KGNVAYATSTGGIVNKMVGRVGDSPCLGAGGYADNDIGAVSTTGHGESILKVNLARLTLF 238
Query: 81 VMEFKGLSLKEASGCVIEECVPR--GNVGLIVVSASSEVTMPFNTTGMFRACATEDGYSH 138
+E +G +++EA+ + R G GLIVVS + + + +T M A A +DG H
Sbjct: 239 HIE-QGKTVEEAADLSLGYMKSRVKGLGGLIVVSKTGDWVAKWTSTSMPWAAA-KDGKLH 296
Query: 139 IGI 141
GI
Sbjct: 297 FGI 299
>pdb|3TKJ|A Chain A, Crystal Structure Of Human Asparaginase-Like Protein 1
Thr168ala
pdb|3TKJ|B Chain B, Crystal Structure Of Human Asparaginase-Like Protein 1
Thr168ala
Length = 319
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 79/123 (64%), Gaps = 5/123 (4%)
Query: 22 KGNLATATSIGGMVNKMVGKIGDTPIIGSGTYA-NNLCAVSATGKGEAIIRHTVARDVAA 80
KGN+A ATS GG+VNKMVG++GD+P +G+G YA N++ AVS TG GE+I++ +AR
Sbjct: 188 KGNVAYATSTGGIVNKMVGRVGDSPCLGAGGYADNDIGAVSTTGHGESILKVNLARLTLF 247
Query: 81 VMEFKGLSLKEASGCVIEECVPR--GNVGLIVVSASSEVTMPFNTTGMFRACATEDGYSH 138
+E +G +++EA+ + R G GLIVVS + + + +T M A A +DG H
Sbjct: 248 HIE-QGKTVEEAADLSLGYMKSRVKGLGGLIVVSKTGDWVAKWTSTSMPWAAA-KDGKLH 305
Query: 139 IGI 141
GI
Sbjct: 306 FGI 308
>pdb|4ET0|A Chain A, Crystal Structure Of Circularly Permuted Human
Asparaginase-Like Protein 1
pdb|4ET0|B Chain B, Crystal Structure Of Circularly Permuted Human
Asparaginase-Like Protein 1
Length = 327
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 79/123 (64%), Gaps = 5/123 (4%)
Query: 22 KGNLATATSIGGMVNKMVGKIGDTPIIGSGTYA-NNLCAVSATGKGEAIIRHTVARDVAA 80
KGN+A ATS GG+VNKMVG++GD+P +G+G YA N++ AVS TG GE+I++ +AR
Sbjct: 184 KGNVAYATSTGGIVNKMVGRVGDSPCLGAGGYADNDIGAVSTTGHGESILKVNLARLTLF 243
Query: 81 VMEFKGLSLKEASGCVIEECVPR--GNVGLIVVSASSEVTMPFNTTGMFRACATEDGYSH 138
+E +G +++EA+ + R G GLIVVS + + + +T M A A +DG H
Sbjct: 244 HIE-QGKTVEEAADLSLGYMKSRVKGLGGLIVVSKTGDWVAKWTSTSMPWAAA-KDGKLH 301
Query: 139 IGI 141
GI
Sbjct: 302 FGI 304
>pdb|9GAA|A Chain A, Precursor Of The T152a Mutant Glycosylasparaginase From
Flavobacterium Meningosepticum
pdb|9GAA|C Chain C, Precursor Of The T152a Mutant Glycosylasparaginase From
Flavobacterium Meningosepticum
Length = 295
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 12/123 (9%)
Query: 21 SKGNLATATSIGGMVNKMVGKIGDTPIIGSGTYANN-LCAVSATGKGEAIIRHTVARDVA 79
++GNL+ A + GM KM G++GD+PIIG+G + +N + A +ATG GE +IR TV +
Sbjct: 160 AQGNLSGACTTSGMAYKMHGRVGDSPIIGAGLFVDNEIGAATATGHGEEVIR-TVGTHLV 218
Query: 80 AVMEFKGLSLKEASGCVIEECVP----RG-NVGLIVVSASSEVTMPFNTTGMFRACATED 134
+ +G + ++A +E V RG N+ I V + N G + A +D
Sbjct: 219 VELMNQGRTPQQACKEAVERIVKIVNRRGKNLKDIQVG-----FIALNKKGEYGAYCIQD 273
Query: 135 GYS 137
G++
Sbjct: 274 GFN 276
>pdb|9GAC|A Chain A, Precursor Of The T152c Mutant Glycosylasparaginase From
Flavobacterium Meningosepticum
pdb|9GAC|C Chain C, Precursor Of The T152c Mutant Glycosylasparaginase From
Flavobacterium Meningosepticum
Length = 295
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 12/123 (9%)
Query: 21 SKGNLATATSIGGMVNKMVGKIGDTPIIGSGTYANN-LCAVSATGKGEAIIRHTVARDVA 79
++GNL+ A + GM KM G++GD+PIIG+G + +N + A +ATG GE +IR TV +
Sbjct: 160 AQGNLSGACTTSGMAYKMHGRVGDSPIIGAGLFVDNEIGAATATGHGEEVIR-TVGTHLV 218
Query: 80 AVMEFKGLSLKEASGCVIEECVP----RG-NVGLIVVSASSEVTMPFNTTGMFRACATED 134
+ +G + ++A +E V RG N+ I V + N G + A +D
Sbjct: 219 VELMNQGRTPQQACKEAVERIVKIVNRRGKNLKDIQVG-----FIALNKKGEYGAYCIQD 273
Query: 135 GYS 137
G++
Sbjct: 274 GFN 276
>pdb|3LJQ|A Chain A, Crystal Structure Of The Glycosylasparaginase T152c
Apo-Precursor
pdb|3LJQ|C Chain C, Crystal Structure Of The Glycosylasparaginase T152c
Apo-Precursor
Length = 299
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 12/123 (9%)
Query: 21 SKGNLATATSIGGMVNKMVGKIGDTPIIGSGTYANN-LCAVSATGKGEAIIRHTVARDVA 79
++GNL+ A + GM KM G++GD+PIIG+G + +N + A +ATG GE +IR TV +
Sbjct: 164 AQGNLSGACTTSGMAYKMHGRVGDSPIIGAGLFVDNEIGAATATGHGEEVIR-TVGTHLV 222
Query: 80 AVMEFKGLSLKEASGCVIEECVP----RG-NVGLIVVSASSEVTMPFNTTGMFRACATED 134
+ +G + ++A +E V RG N+ I V + N G + A +D
Sbjct: 223 VELMNQGRTPQQACKEAVERIVKIVNRRGKNLKDIQVG-----FIALNKKGEYGAYCIQD 277
Query: 135 GYS 137
G++
Sbjct: 278 GFN 280
>pdb|1P4K|A Chain A, Crystal Structure Of The Glycosylasparaginase Precursor
D151n Mutant
pdb|1P4K|C Chain C, Crystal Structure Of The Glycosylasparaginase Precursor
D151n Mutant
pdb|1P4V|A Chain A, Crystal Structure Of The Glycosylasparaginase Precursor
D151n Mutant With Glycine
pdb|1P4V|C Chain C, Crystal Structure Of The Glycosylasparaginase Precursor
D151n Mutant With Glycine
Length = 295
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 12/123 (9%)
Query: 21 SKGNLATATSIGGMVNKMVGKIGDTPIIGSGTYANN-LCAVSATGKGEAIIRHTVARDVA 79
++GNL+ A + GM KM G++GD+PIIG+G + +N + A +ATG GE +IR TV +
Sbjct: 160 AQGNLSGACTTSGMAYKMHGRVGDSPIIGAGLFVDNEIGAATATGHGEEVIR-TVGTHLV 218
Query: 80 AVMEFKGLSLKEASGCVIEECVP----RG-NVGLIVVSASSEVTMPFNTTGMFRACATED 134
+ +G + ++A +E V RG N+ I V + N G + A +D
Sbjct: 219 VELMNQGRTPQQACKEAVERIVKIVNRRGKNLKDIQVG-----FIALNKKGEYGAYCIQD 273
Query: 135 GYS 137
G++
Sbjct: 274 GFN 276
>pdb|9GAF|A Chain A, Precursor Of The W11f Mutant Glycosylasparaginase From
Flavobacterium Meningosepticum
pdb|9GAF|C Chain C, Precursor Of The W11f Mutant Glycosylasparaginase From
Flavobacterium Meningosepticum
Length = 295
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 12/123 (9%)
Query: 21 SKGNLATATSIGGMVNKMVGKIGDTPIIGSGTYANN-LCAVSATGKGEAIIRHTVARDVA 79
++GNL+ A + GM KM G++GD+PIIG+G + +N + A +ATG GE +IR TV +
Sbjct: 160 AQGNLSGACTTSGMAYKMHGRVGDSPIIGAGLFVDNEIGAATATGHGEEVIR-TVGTHLV 218
Query: 80 AVMEFKGLSLKEASGCVIEECVP----RG-NVGLIVVSASSEVTMPFNTTGMFRACATED 134
+ +G + ++A +E V RG N+ I V + N G + A +D
Sbjct: 219 VELMNQGRTPQQACKEAVERIVKIVNRRGKNLKDIQVG-----FIALNKKGEYGAYCIQD 273
Query: 135 GYS 137
G++
Sbjct: 274 GFN 276
>pdb|1AYY|B Chain B, Glycosylasparaginase
pdb|1AYY|D Chain D, Glycosylasparaginase
pdb|2GAW|B Chain B, Wild Type Glycosylasparaginase From Flavobacterium
Meningosepticum
pdb|2GAW|D Chain D, Wild Type Glycosylasparaginase From Flavobacterium
Meningosepticum
Length = 144
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 12/123 (9%)
Query: 21 SKGNLATATSIGGMVNKMVGKIGDTPIIGSGTYANN-LCAVSATGKGEAIIRHTVARDVA 79
++GNL+ A + GM KM G++GD+PIIG+G + +N + A +ATG GE +IR TV +
Sbjct: 9 AQGNLSGACTTSGMAYKMHGRVGDSPIIGAGLFVDNEIGAATATGHGEEVIR-TVGTHLV 67
Query: 80 AVMEFKGLSLKEASGCVIEECVP----RG-NVGLIVVSASSEVTMPFNTTGMFRACATED 134
+ +G + ++A +E V RG N+ I V + N G + A +D
Sbjct: 68 VELMNQGRTPQQACKEAVERIVKIVNRRGKNLKDIQVG-----FIALNKKGEYGAYCIQD 122
Query: 135 GYS 137
G++
Sbjct: 123 GFN 125
>pdb|2GAC|B Chain B, T152c Mutant Glycosylasparaginase From Flavobacterium
Meningosepticum
pdb|2GAC|D Chain D, T152c Mutant Glycosylasparaginase From Flavobacterium
Meningosepticum
pdb|2GL9|B Chain B, Crystal Structure Of Glycosylasparaginase-Substrate
Complex
pdb|2GL9|D Chain D, Crystal Structure Of Glycosylasparaginase-Substrate
Complex
Length = 144
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 12/123 (9%)
Query: 21 SKGNLATATSIGGMVNKMVGKIGDTPIIGSGTYANN-LCAVSATGKGEAIIRHTVARDVA 79
++GNL+ A + GM KM G++GD+PIIG+G + +N + A +ATG GE +IR TV +
Sbjct: 9 AQGNLSGACTTSGMAYKMHGRVGDSPIIGAGLFVDNEIGAATATGHGEEVIR-TVGTHLV 67
Query: 80 AVMEFKGLSLKEASGCVIEECVP----RG-NVGLIVVSASSEVTMPFNTTGMFRACATED 134
+ +G + ++A +E V RG N+ I V + N G + A +D
Sbjct: 68 VELMNQGRTPQQACKEAVERIVKIVNRRGKNLKDIQVG-----FIALNKKGEYGAYCIQD 122
Query: 135 GYS 137
G++
Sbjct: 123 GFN 125
>pdb|2A8J|A Chain A, Crystal Structure Of Human Taspase1 (Acivated Form)
pdb|2A8J|B Chain B, Crystal Structure Of Human Taspase1 (Acivated Form)
Length = 420
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 22 KGNLATATSIGGMVNKMVGKIGDTPIIGSGTYANNL-------CAVSATGKGEAIIRHTV 74
+GN+A A S GG+ K G++G + G G +A N AVS +G GE ++R +
Sbjct: 243 EGNVAAAVSSGGLALKHPGRVGQAALYGCGCWAENTGAHNPYSTAVSTSGCGEHLVRTIL 302
Query: 75 ARDVAAVME 83
AR+ + ++
Sbjct: 303 ARECSHALQ 311
>pdb|2A8I|A Chain A, Crystal Structure Of Human Taspase1
pdb|2A8I|B Chain B, Crystal Structure Of Human Taspase1
Length = 420
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 22 KGNLATATSIGGMVNKMVGKIGDTPIIGSGTYANNL-------CAVSATGKGEAIIRHTV 74
+GN+A A S GG+ K G++G + G G +A N AVS +G GE ++R +
Sbjct: 243 EGNVAAAVSSGGLALKHPGRVGQAALYGCGCWAENTGAHNPYSTAVSTSGCGEHLVRTIL 302
Query: 75 ARDVAAVME 83
AR+ + ++
Sbjct: 303 ARECSHALQ 311
>pdb|2A8M|A Chain A, Crystal Structure Of Human Taspase1 (T234s Mutant)
pdb|2A8M|B Chain B, Crystal Structure Of Human Taspase1 (T234s Mutant)
Length = 420
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 22 KGNLATATSIGGMVNKMVGKIGDTPIIGSGTYANNL-------CAVSATGKGEAIIRHTV 74
+GN+A A S GG+ K G++G + G G +A N AVS +G GE ++R +
Sbjct: 243 EGNVAAAVSSGGLALKHPGRVGQAALYGCGCWAENTGAHNPYSTAVSTSGCGEHLVRTIL 302
Query: 75 ARDVAAVME 83
AR+ + ++
Sbjct: 303 ARECSHALQ 311
>pdb|2A8L|A Chain A, Crystal Structure Of Human Taspase1 (T234a Mutant)
pdb|2A8L|B Chain B, Crystal Structure Of Human Taspase1 (T234a Mutant)
Length = 420
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 22 KGNLATATSIGGMVNKMVGKIGDTPIIGSGTYANNL-------CAVSATGKGEAIIRHTV 74
+GN+A A S GG+ K G++G + G G +A N AVS +G GE ++R +
Sbjct: 243 EGNVAAAVSSGGLALKHPGRVGQAALYGCGCWAENTGAHNPYSTAVSTSGCGEHLVRTIL 302
Query: 75 ARDVAAVME 83
AR+ + ++
Sbjct: 303 ARECSHALQ 311
>pdb|1APY|B Chain B, Human Aspartylglucosaminidase
pdb|1APY|D Chain D, Human Aspartylglucosaminidase
pdb|1APZ|B Chain B, Human Aspartylglucosaminidase Complex With Reaction
Product
pdb|1APZ|D Chain D, Human Aspartylglucosaminidase Complex With Reaction
Product
Length = 141
Score = 33.9 bits (76), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 23 GNLATATSIGGMVNKMVGKIGDTPIIGSGTY 53
G++A TS G+ K+ G++GD+PI G+G Y
Sbjct: 11 GHIAAGTSTNGIKFKIHGRVGDSPIPGAGAY 41
>pdb|2GEZ|A Chain A, Crystal Structure Of Potassium-Independent Plant
Asparaginase
pdb|2GEZ|C Chain C, Crystal Structure Of Potassium-Independent Plant
Asparaginase
pdb|2GEZ|E Chain E, Crystal Structure Of Potassium-Independent Plant
Asparaginase
pdb|2GEZ|G Chain G, Crystal Structure Of Potassium-Independent Plant
Asparaginase
Length = 195
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/14 (78%), Positives = 12/14 (85%)
Query: 1 MEACIMDGNTKRCG 14
MEA IMDGNT +CG
Sbjct: 84 MEASIMDGNTMKCG 97
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.132 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,825,312
Number of Sequences: 62578
Number of extensions: 221221
Number of successful extensions: 510
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 459
Number of HSP's gapped (non-prelim): 30
length of query: 207
length of database: 14,973,337
effective HSP length: 94
effective length of query: 113
effective length of database: 9,091,005
effective search space: 1027283565
effective search space used: 1027283565
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)