Your job contains 1 sequence.
>038314
MGYKKRTEQETTHSNNSSSLSEALLFATMCIIGLPVDVYIKDGSVYSGIFYTASVEKDYG
IVLKKAKMSKKGKSNANVANGTVIETLVILSADLVQVVAKGVQLPADGIAGNFAGDDVVA
VAGTVPPIDGQISEAKRPIRSGLNKRRNQKRISVRNENGYFHGDGPIKAEKEHEEQMLSL
KNMRNAMEVEHGKRDRMDVTKIEEASVDSVNGRQVGDKSSQGQQDSCTRTTELHKGDNVD
GVQGSSTNLGACQGPVMPAEEHPNMAFKHSNGVSHDPAHELDKPENQCRERPTSADTSSQ
GAARSTVSTSSTPVTDVTSGLCFSSLAASTEVVPLQSAPSNKSTKEFKLNPGAKIFSPSS
VNPVSATSPAIPTATSMAYVPSNSPVLPIAAAQSEVGVGPYLSHSSVPSKFVPYGTLTAA
NGGSAAQFSQPIVGHAGRSQPVRYAGQYPVQAGPTYVHPSSQAVMFGRVGGQLVYMQPVS
NDLGVAAMSPVSARPALTPHQVQFPKHQGNAAGQALQLCIPSPMVAGGLQPFPVPSHIPV
LQPPIPANRPIPVPGSNGLYSTKFP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038314
(565 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2116317 - symbol:AT4G26990 "AT4G26990" species... 463 1.3e-74 3
TAIR|locus:2160235 - symbol:AT5G54920 "AT5G54920" species... 494 1.1e-70 2
TAIR|locus:2014330 - symbol:CID3 "CTC-interacting domain ... 153 1.3e-12 2
TAIR|locus:2088222 - symbol:CID4 "CTC-interacting domain ... 138 3.1e-10 2
UNIPROTKB|J9JHE8 - symbol:BPTF "Uncharacterized protein" ... 116 0.00011 2
>TAIR|locus:2116317 [details] [associations]
symbol:AT4G26990 "AT4G26990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 InterPro:IPR025852 Pfam:PF14438
EMBL:AY075624 EMBL:AY149941 IPI:IPI00523544 RefSeq:NP_194429.3
UniGene:At.32128 ProteinModelPortal:Q8RY61 SMR:Q8RY61 IntAct:Q8RY61
EnsemblPlants:AT4G26990.1 GeneID:828807 KEGG:ath:AT4G26990
TAIR:At4g26990 eggNOG:NOG330883 InParanoid:Q8RY61 OMA:NIAYIPS
PhylomeDB:Q8RY61 ProtClustDB:CLSN2690018 Genevestigator:Q8RY61
Uniprot:Q8RY61
Length = 474
Score = 463 (168.0 bits), Expect = 1.3e-74, Sum P(3) = 1.3e-74
Identities = 114/253 (45%), Positives = 144/253 (56%)
Query: 321 LCFSSLAAS-TEVVPLQSAPSNKSTKEFKLNPGAKIFSPSSVNPVSATSPAIPTATSMAY 379
LC +AAS T VP+Q+ K KEFKLNP AKIFSPS +S + +P ++AY
Sbjct: 228 LCRGRVAASSTASVPIQAV---KKPKEFKLNPEAKIFSPSYTKRLSPSPVGMPHVGNIAY 284
Query: 380 VPSNSPVLPIAAA-QSEVGVGPYLSHSSVPSKFVPYGTLTAANGGSAAQFSQPIVGHA-G 437
+PSN+P+LP+ A EV PY+ + PSKFVPYG +TA + QF Q ++G
Sbjct: 285 IPSNTPMLPVPEAIYPEVVNNPYVPQAPPPSKFVPYGNVTAGHAVGGFQFPQHMIGPTVN 344
Query: 438 RSQPVRYAGQY-PVQAGPTYVHPSSQAVMFGRVGGQLVYMQPVSNDL--GVAAMSPVSAR 494
R+QP RY QY VQA P V+PS Q VM R GQLVY+Q VS DL G +SP+ +
Sbjct: 345 RAQPQRYTAQYHSVQAAPMLVNPSPQ-VMVAR-SGQLVYVQSVSQDLVQGTPPLSPMLSC 402
Query: 495 PALTPHQVQFPKHQGN-AAGQALQLCIPSPMVAGGLQPFPVPSHIPVLQXXXXXXXXXXX 553
P T VQ+ KHQG AAGQ L LC+ P GG QP+ +P+ P +Q
Sbjct: 403 PLPTAQHVQYLKHQGVVAAGQPLPLCVSLPFTTGGPQPYGIPTQFPAMQQPPFPTNQPMT 462
Query: 554 XG-SNGLYSTKFP 565
NG Y TKFP
Sbjct: 463 VAVPNGFY-TKFP 474
Score = 240 (89.5 bits), Expect = 1.3e-74, Sum P(3) = 1.3e-74
Identities = 49/112 (43%), Positives = 71/112 (63%)
Query: 1 MGYKKRTEQETTHXXXXXXXXEALLFATMCIIGLPVDVYIKDGSVYSGIFYTASVEKDYG 60
MG ++ E + + L+ ATMCIIGL V V++KDGSV+SGIF+TASV+ +G
Sbjct: 1 MGNARKVEDDDNNNNNKSSSS-VLIAATMCIIGLQVHVHVKDGSVFSGIFFTASVDNGFG 59
Query: 61 IVLXXXXXXXXXXXXXXVANGTVIETLVILSADLVQVVAKGVQLPADGIAGN 112
IVL VA+G+V++TLVILS+ +VQ++A+GV LP++ N
Sbjct: 60 IVLKDARITKKGTSISNVASGSVVDTLVILSSTIVQIIAEGVSLPSNVTTAN 111
Score = 81 (33.6 bits), Expect = 1.3e-74, Sum P(3) = 1.3e-74
Identities = 28/91 (30%), Positives = 40/91 (43%)
Query: 209 SVNGRQVGDKSSQGQQ--DSCTRTTELHKGDNVDGVQGSSTNLGACQGPVMPAEEHPNMA 266
S GR K G Q + E+++ DN+D +Q SS++L + V P EE M
Sbjct: 137 STQGRGFNHKRQAGAQILKRSVQIPEVYQQDNID-IQSSSSSLDSMSERVKPIEEDNLMP 195
Query: 267 FKHSNGVSHDPAHELDKPENQCRERPTSADT 297
SNG H+ A + +N E DT
Sbjct: 196 EPLSNGF-HNAAAKPSSTDNLLSESTPVDDT 225
>TAIR|locus:2160235 [details] [associations]
symbol:AT5G54920 "AT5G54920" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] EMBL:CP002688 InterPro:IPR025852
Pfam:PF14438 IPI:IPI00546406 RefSeq:NP_001119437.1 UniGene:At.28029
UniGene:At.7207 ProteinModelPortal:F4K1W7 EnsemblPlants:AT5G54920.2
GeneID:835583 KEGG:ath:AT5G54920 OMA:VETLVIL Uniprot:F4K1W7
Length = 522
Score = 494 (179.0 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 115/248 (46%), Positives = 141/248 (56%)
Query: 326 LAASTEVVP-LQSAPSNKSTKEFKLNPGAKIFSPSSVNPV-SATSPAIPTATSMAYVPSN 383
L ST +P Q+ +K KEFKLNPGAK FSPS + SA + P +M YVPSN
Sbjct: 276 LVVSTNSLPPTQATDPDKKAKEFKLNPGAKTFSPSLAKRLTSAHAGMTPVVANMGYVPSN 335
Query: 384 SPVLPIA-AAQSEVGVGPYLSHSSVPSKFVPYGTLTAANGGSAAQFSQPIVGHA-GRSQP 441
+P+LP+ A Q E+G+ P+LSH+S PSKFVPY L N G + F Q +VG R QP
Sbjct: 336 TPMLPVPEAVQPEIGISPFLSHASSPSKFVPYTNLATGNAGGGSHFPQHMVGPTINRGQP 395
Query: 442 VRYAGQY-PVQAGPTYVHPSSQAVMFGRVGGQLVYMQPVSNDL--GVAAMSPVSARPALT 498
R+ QY VQ P V+P+ Q VM GR GQL+YMQP+S DL G S + RP T
Sbjct: 396 HRFTTQYHSVQPTPMLVNPNPQ-VMVGR-SGQLMYMQPISQDLVQGAPHNSHLPPRPLFT 453
Query: 499 PHQVQFPKHQGN-AAGQALQLCIPSPMVAGGLQPFPV-PSHIPVLQXXXXXXXXXXXXGS 556
P Q Q+PKHQ A GQ + L P P A G QP+ V P+ IPV+Q
Sbjct: 454 PQQFQYPKHQSLIATGQPMHLYAPQPFAANGHQPYTVMPTDIPVMQSPFPINRAMPIPVP 513
Query: 557 NGLYSTKF 564
NG Y TKF
Sbjct: 514 NGFYGTKF 521
Score = 240 (89.5 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 73/233 (31%), Positives = 108/233 (46%)
Query: 1 MGYKKRTEQETTHXXXXXXXX---EALLFATMCIIGLPVDVYIKDGSVYSGIFYTASVEK 57
M K+ E E + EALL +TMCIIGL V V+I DGSV+SGIFYT S+E
Sbjct: 1 MAIAKKLENEISRSSPSSSSSSLNEALLISTMCIIGLQVHVHINDGSVFSGIFYTVSLEN 60
Query: 58 DYGIVLXXXXXXXXXXXXXXVANGTVIETLVILSADLVQVVAKGVQLPADGIAGNFXXXX 117
++ IVL V +G ++ETLVILS+++VQ+VA+GV L ++ +AG
Sbjct: 61 EFSIVLKNAKLTKKGRSKSNVESGKIVETLVILSSNIVQIVAEGVSLSSN-VAGEIEGEN 119
Query: 118 XXXXXXTVPPIDGQISEAKRPIRSGLNKRRNQ-KRISVRNENGYFHGDGPIK-AEKE--H 173
+ K R G N+RRN KR + G A KE
Sbjct: 120 VVSAVAV-----SSFNSGKN--RRGTNRRRNSAKRENCLESKARTLTSGETAGAMKEPGR 172
Query: 174 EEQMLSLKNMRNAMEVEHGKRDRMDVTKIEEASVDSVNGRQVGDKSSQGQQDS 226
+++ L+N + + H ++ + + K + D V +SS D+
Sbjct: 173 RDEVGILQNKYHPSSLNHQRQAGVRILKNSKKITDVHQEDNVEARSSSCSLDN 225
Score = 90 (36.7 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
Identities = 44/162 (27%), Positives = 73/162 (45%)
Query: 141 SGLNKR-RNQKRISVRNENGYFHGDGPIKAEKEHEEQMLSLKNMRNAMEVEHGKRDRMDV 199
SG N+R N++R S + EN E + + L+ AM+ E G+RD + +
Sbjct: 131 SGKNRRGTNRRRNSAKRENCL-----------ESKARTLTSGETAGAMK-EPGRRDEVGI 178
Query: 200 TKIEEASVDSVNG-RQVGDKSSQGQQDSCTRTTELHKGDNVDGVQGSSTNLGACQGPVMP 258
+ + S+N RQ G + + + + T++H+ DNV+ + SS +L V P
Sbjct: 179 LQ-NKYHPSSLNHQRQAGVRILKNSK----KITDVHQEDNVEA-RSSSCSLDNMSERVKP 232
Query: 259 AEEHPNMAFKHSNGVSHDPAHELDKPENQCRERPTSADTSSQ 300
E+ M SNG HD EN + T+ D +S+
Sbjct: 233 IEQE-KMPEPSSNGF-HDATERPSSTENSSSQS-TTVDENSE 271
Score = 37 (18.1 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 262 HPNMAFKHSNGVSHDPAH 279
+ N+A ++ G SH P H
Sbjct: 367 YTNLATGNAGGGSHFPQH 384
>TAIR|locus:2014330 [details] [associations]
symbol:CID3 "CTC-interacting domain 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
EMBL:CP002684 GenomeReviews:CT485782_GR InterPro:IPR009818
InterPro:IPR009604 InterPro:IPR025852 Pfam:PF06741 Pfam:PF07145
Pfam:PF14438 eggNOG:COG5180 EMBL:AY136398 EMBL:BT000204
IPI:IPI00535135 RefSeq:NP_175819.1 UniGene:At.37271
ProteinModelPortal:Q8L793 SMR:Q8L793 IntAct:Q8L793 PaxDb:Q8L793
PRIDE:Q8L793 EnsemblPlants:AT1G54170.1 GeneID:841857
KEGG:ath:AT1G54170 TAIR:At1g54170 InParanoid:Q8L793 OMA:EIVGENT
PhylomeDB:Q8L793 ProtClustDB:CLSN2682171 ArrayExpress:Q8L793
Genevestigator:Q8L793 Uniprot:Q8L793
Length = 587
Score = 153 (58.9 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 35/88 (39%), Positives = 52/88 (59%)
Query: 24 LLFATMCIIGLPVDVYIKDGSVYSGIFYTASVEKDYGIVLXXXXXXXXXXXXXXVANGTV 83
L++ T C IG V+V++K+GSVYSGIF+ A+VEKD+GI+L
Sbjct: 52 LVYFTTCNIGHQVEVHLKNGSVYSGIFHAANVEKDFGIILKMACLIRDSRGTKSRTVSKP 111
Query: 84 IETLVILSAD-LVQVVAKGVQLPADGIA 110
L+ + AD LVQV+AK + L +D ++
Sbjct: 112 SSKLLKIPADELVQVIAKDLPLSSDSVS 139
Score = 94 (38.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 32/119 (26%), Positives = 46/119 (38%)
Query: 341 NKSTKEFKLNPGAKIFSPSSVNPVSATSPAIPTATSMAYVPSNSPVLPIAAAQSEVGVG- 399
N + KEFKLNP AK F PS + SP P Y P PV P+ G G
Sbjct: 469 NPNAKEFKLNPNAKSFKPSP-SATRPQSPQSPVFDGSFYYP---PVPPMPGLHIRYGTGA 524
Query: 400 --PYLSHSSVPSKFVPYGTLTAANGGSAAQFSQPIVGHAGRSQPVRYAGQYPVQAGPTY 456
P H + + ++ Q+ QP++ + +P+ + P Q Y
Sbjct: 525 AFPGQQHPMMYNNTTQLSPNQTYYSPNSPQYPQPMM--VTQQRPILFMPPTPYQPEMPY 581
Score = 46 (21.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 47/172 (27%), Positives = 65/172 (37%)
Query: 337 SAPSNKSTKEFKLNP---GAKIFSPSSVNPVSATSPAIPTATSMAYVPSNSPVLPIAAAQ 393
SA S+ S L+P G+ S++NP + P A S + PS S P + Q
Sbjct: 442 SAASSASNLPI-LSPSSSGSLSSEKSTLNPNAKEFKLNPNAKS--FKPSPSATRP-QSPQ 497
Query: 394 SEVGVGPYLSHSSVPSKFVPYGTLTAANGGSAAQFSQPIVGHAGRSQPVRYAGQYPVQAG 453
S V G + + VP P L G AA F P G+ P+ Y +
Sbjct: 498 SPVFDGSFY-YPPVP----PMPGLHIRYGTGAA-F--P-----GQQHPMMYNNTTQLSPN 544
Query: 454 PTYVHPSSQAVMFGRVGGQLVYMQPVSNDLGVAAMSPVSARPALTPHQVQFP 505
TY P+S Y QP+ V P+ P TP+Q + P
Sbjct: 545 QTYYSPNSPQ-----------YPQPMM----VTQQRPILFMPP-TPYQPEMP 580
>TAIR|locus:2088222 [details] [associations]
symbol:CID4 "CTC-interacting domain 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009630
"gravitropism" evidence=RCA] EMBL:CP002686 InterPro:IPR009818
InterPro:IPR009604 InterPro:IPR025852 Pfam:PF06741 Pfam:PF07145
Pfam:PF14438 eggNOG:COG5180 ProtClustDB:CLSN2682171 EMBL:AY045922
EMBL:AY079365 IPI:IPI00537524 RefSeq:NP_001078150.1
RefSeq:NP_001078151.1 RefSeq:NP_566471.1 UniGene:At.5643
ProteinModelPortal:Q94AM9 IntAct:Q94AM9 STRING:Q94AM9 PaxDb:Q94AM9
PRIDE:Q94AM9 EnsemblPlants:AT3G14010.1 EnsemblPlants:AT3G14010.2
EnsemblPlants:AT3G14010.3 GeneID:820615 KEGG:ath:AT3G14010
TAIR:At3g14010 InParanoid:Q94AM9 OMA:FDEEARY PhylomeDB:Q94AM9
ArrayExpress:Q94AM9 Genevestigator:Q94AM9 Uniprot:Q94AM9
Length = 595
Score = 138 (53.6 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 30/94 (31%), Positives = 56/94 (59%)
Query: 22 EALLFATMCIIGLPVDVYIKDGSVYSGIFYTASVEKDYGIVLXXXXXXXXXXXXXXVANG 81
+ L++ T C IG V+V++++GSVY+GIF+ A+VEKD+GI+L +
Sbjct: 47 DRLVYFTTCKIGHHVEVHLRNGSVYTGIFHAANVEKDFGIILKMACLIKDGTLRGHKSRS 106
Query: 82 TVI-----ETLVILSADLVQVVAKGVQLPADGIA 110
+ +T +I + +LVQV+AK + + ++ ++
Sbjct: 107 EFVRKPPSKTFIIPADELVQVIAKDLSVSSNNMS 140
Score = 87 (35.7 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 35/125 (28%), Positives = 50/125 (40%)
Query: 280 ELDKPENQCRERPTSADTSSQGAARXXXXXXXXXXXXXXXGLCFSSLAASTEVVPLQSAP 339
E ++ +Q + S + Q A+R GL SS S + + +
Sbjct: 410 EREREASQVSSKTKSESSFGQSASRSSESRPGPSTSSRP-GLSPSSSIGS--MASSEKST 466
Query: 340 SNKSTKEFKLNPGAKIFSPSSVNPVSATSPAIPTATSMAYVP--SNSPVLPIAAAQS-EV 396
N + KEFKLNP AK F P +A P P A + Y P S+ PV +
Sbjct: 467 LNPNAKEFKLNPKAKSFKPLQS---AAAPPQSPIADASFYYPGPSHVPVQQMPGMPPVNY 523
Query: 397 GVGPY 401
G+ PY
Sbjct: 524 GLPPY 528
Score = 55 (24.4 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 28/126 (22%), Positives = 50/126 (39%)
Query: 419 AANGGSAAQFSQPIVGHAGRSQPVRYAGQYPVQAGPTYVHPSSQAVMFGRVGGQLVYMQP 478
A +GG A+ S+ + + V + G + SS++ R G
Sbjct: 395 AKSGGGASSVSKAVTEREREASQVSSKTKSESSFGQS-ASRSSES----RPGPSTSSRPG 449
Query: 479 VSNDLGVAAMSPVSARPALTPHQVQFPKHQGNAAGQALQLCIPSPM--VAGGLQPFPVPS 536
+S + +M+ S + L P+ +F + + + LQ P +A +P PS
Sbjct: 450 LSPSSSIGSMAS-SEKSTLNPNAKEFKLNPKAKSFKPLQSAAAPPQSPIADASFYYPGPS 508
Query: 537 HIPVLQ 542
H+PV Q
Sbjct: 509 HVPVQQ 514
Score = 43 (20.2 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 28/149 (18%), Positives = 58/149 (38%)
Query: 133 SEAKRPIRSGLNKRRNQKRISVRNENGYFHG--DGPIKAEKEHEEQMLSL-KNMRNAMEV 189
S+ ++P SG K + R+S +++ + D K+ + + N+ +
Sbjct: 307 SDGQKPASSG--KGCEELRVSGDSQSSRKNKNVDQSCSTSKQQSKDFPAAGSNISESQLD 364
Query: 190 EHGKRDRMDVTKIEEASVDSVNGR---QVGDKSSQGQQDSCTRTTELHK-GDNVDGVQGS 245
E +++ +V+ ++ +S +G + G KS G TE + V S
Sbjct: 365 EQRRKNNEEVSHNNRSAEESTSGHGDIKEGAKSGGGASSVSKAVTEREREASQVSSKTKS 424
Query: 246 STNLGACQGPVMPAEEHPNMAFKHSNGVS 274
++ G Q +E P + G+S
Sbjct: 425 ESSFG--QSASRSSESRPGPSTSSRPGLS 451
Score = 38 (18.4 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 14/51 (27%), Positives = 18/51 (35%)
Query: 490 PVSARPALTPHQVQFPKHQGNAAGQALQLCIPSPMVAGGLQP-FPVPSHIP 539
PV P + P P + GN Q + P QP +P IP
Sbjct: 511 PVQQMPGMPPVNYGLPPYPGN---QPQMMYHPQAYYHPNGQPQYPQQQMIP 558
>UNIPROTKB|J9JHE8 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
OMA:DVIMEDF GeneTree:ENSGT00660000095339 EMBL:AAEX03006365
EMBL:AAEX03006366 Ensembl:ENSCAFT00000047847 Uniprot:J9JHE8
Length = 2842
Score = 116 (45.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 66/235 (28%), Positives = 102/235 (43%)
Query: 321 LCFSSLAASTEVVPLQSAPSNKST-KEFKLNPGAKIFSPSSVNPVSATSPAIPTATSMAY 379
L ++ AAST + + + S ++ KL+P ++ ++ ++S + P A
Sbjct: 2136 LATTATAASTTTTTVSTTAAGTSEQRQSKLSPPTQVQQAKTLPAAQSSSVSPPEAQPQTA 2195
Query: 380 VPSNSP---VLPIAAAQSEVGVGPYLSHSSVPSKFVPYGTLTAANGGSAAQFSQPIVGHA 436
PS P P + AQ EV P + + + VP + A + AQ S+P V A
Sbjct: 2196 QPSAQPQSQTQPQSPAQPEVQTQPEVQTQTTVASHVP----SEAQP-TQAQSSKPQV--A 2248
Query: 437 GRSQPV-RYAGQYP--VQAGP-TYVHPSSQA-VMFGRVGG-QLVYMQPVSNDLGVAAMSP 490
+ QP GQ P VQ+ P T + PS+ + V G+ Q QP+ + P
Sbjct: 2249 VQCQPQSNVQGQSPARVQSPPQTRIRPSTPSQVSPGQQSQVQTTTSQPIPIQPHTSLQIP 2308
Query: 491 VSARPALTPHQVQFPKHQGNAAGQAL-QLCIPSPM--VAGGLQPFPVPSHIPVLQ 542
+P P QVQ P Q ++GQ L Q+ + SP QP P +P LQ
Sbjct: 2309 SQGQPQSQP-QVQSPT-QTLSSGQTLSQVTVSSPSRPQLQIQQPQPQVIAVPQLQ 2361
Score = 71 (30.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 29/136 (21%), Positives = 53/136 (38%)
Query: 167 IKAEKEHEEQMLSLKNMRNAMEVEHGKRDRMDVTKIEEASVDSVNGRQVGDKSSQGQQDS 226
+K+ +E E+ +N N+ +VE R+ + +E+ S D + S+ +
Sbjct: 370 VKSPEEIEKDKNETEN-NNSKDVEKS-REEFEDQSLEKDSDDKTPDDDPEQEKSEEPTEV 427
Query: 227 CTR--TTELHKGDNVDGVQGSSTNLGACQGPV-MPAEEHPNMAFKHSNGVSHDPAHELDK 283
+ + + GDN T+ + PV +E H + S P ++
Sbjct: 428 GDKGNSVSANLGDNTTNASSEETSPSEGRSPVGCLSETHDSSNMAEKKVASELPQDVPEE 487
Query: 284 PENQCRERPTSADTSS 299
P C TSA T+S
Sbjct: 488 PNKTCDSSNTSATTTS 503
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.129 0.374 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 565 506 0.00086 119 3 11 23 0.46 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 595 (63 KB)
Total size of DFA: 254 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 48.57u 0.15s 48.72t Elapsed: 00:00:02
Total cpu time: 48.57u 0.15s 48.72t Elapsed: 00:00:02
Start: Sat May 11 01:04:21 2013 End: Sat May 11 01:04:23 2013