BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038318
(220 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 17/125 (13%)
Query: 32 ILYIDLSSNSLSGFLPSNIEKLKVLV--------------DCFGSLTSLEFLDISNNNLF 77
++++D+S N LSG++P I + L D G L L LD+S+N L
Sbjct: 631 MMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLD 690
Query: 78 GKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWNYTLCGPPRLQVPSCKE 137
G+IP++ L+ L +++ +++ L IP F+ N LCG P +P C
Sbjct: 691 GRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP---LPRCDP 747
Query: 138 DNSRG 142
N+ G
Sbjct: 748 SNADG 752
Score = 33.5 bits (75), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 2 LGSLTYLRTPHLGXXXXXXXXXXXXXXVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFG 61
LGSL+ LR L V+ + + L N L+G +PS L +C
Sbjct: 435 LGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG------LSNC-- 486
Query: 62 SLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE 107
T+L ++ +SNN L G+IPK L L L +++ IP E
Sbjct: 487 --TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE 530
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Query: 34 YIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQL 93
++D+SSN+ S +P L DC ++L+ LDIS N L G ++ + LK L
Sbjct: 201 FLDVSSNNFSTGIP-------FLGDC----SALQHLDISGNKLSGDFSRAISTCTELKLL 249
Query: 94 NAAHSKLEEEIP 105
N + ++ IP
Sbjct: 250 NISSNQFVGPIP 261
Score = 31.2 bits (69), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 60 FGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE 107
F + S+ FLD+S N L G IPK + L LN H+ + IP E
Sbjct: 625 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDE 672
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 16/92 (17%)
Query: 32 ILYIDLSSNSLSG-FLPS-------NIEKLKVLVDCF--------GSLTSLEFLDISNNN 75
+L +DLSSN+ SG LP+ +++L + + F + + L L +S N
Sbjct: 367 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNY 426
Query: 76 LFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE 107
L G IP S LS+L+ L + LE EIP E
Sbjct: 427 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQE 458
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 29 VECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFKGLS 88
++ + Y+ L+ N +G +P + G+ +L LD+S N+ +G +P F S
Sbjct: 265 LKSLQYLSLAENKFTGEIPDFLS---------GACDTLTGLDLSGNHFYGAVPPFFGSCS 315
Query: 89 RLKQLNAAHSKLEEEIPIERPLR 111
L+ L + + E+P++ L+
Sbjct: 316 LLESLALSSNNFSGELPMDTLLK 338
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 17/88 (19%)
Query: 35 IDLSSNSLSGFLPSNIEKLKV---LVD--------------CFGSLTSLEFLDISNNNLF 77
+DLS N SG LP ++ L +D C +L+ L + NN
Sbjct: 345 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 404
Query: 78 GKIPKSFKGLSRLKQLNAAHSKLEEEIP 105
GKIP + S L L+ + + L IP
Sbjct: 405 GKIPPTLSNCSELVSLHLSFNYLSGTIP 432
Score = 26.9 bits (58), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 32/111 (28%)
Query: 35 IDLSSNSLSGFLPSNIEKLKVLVDCFGSL-------------------TSLEFLDISNNN 75
+DLS+NS+SG +N+ VL D G L +LEFLD+S+NN
Sbjct: 153 LDLSANSISG---ANVVGW-VLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNN 208
Query: 76 LFGKIPKSFKG-LSRLKQLNAAHSKLEEEIP------IERPLRNILAQSFI 119
IP F G S L+ L+ + +KL + E L NI + F+
Sbjct: 209 FSTGIP--FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFV 257
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 17/125 (13%)
Query: 32 ILYIDLSSNSLSGFLPSNIEKLKVLV--------------DCFGSLTSLEFLDISNNNLF 77
++++D+S N LSG++P I + L D G L L LD+S+N L
Sbjct: 634 MMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLD 693
Query: 78 GKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWNYTLCGPPRLQVPSCKE 137
G+IP++ L+ L +++ +++ L IP F+ N LCG P +P C
Sbjct: 694 GRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP---LPRCDP 750
Query: 138 DNSRG 142
N+ G
Sbjct: 751 SNADG 755
Score = 33.5 bits (75), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 2 LGSLTYLRTPHLGXXXXXXXXXXXXXXVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFG 61
LGSL+ LR L V+ + + L N L+G +PS L +C
Sbjct: 438 LGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG------LSNC-- 489
Query: 62 SLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE 107
T+L ++ +SNN L G+IPK L L L +++ IP E
Sbjct: 490 --TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE 533
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Query: 34 YIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQL 93
++D+SSN+ S +P L DC ++L+ LDIS N L G ++ + LK L
Sbjct: 204 FLDVSSNNFSTGIP-------FLGDC----SALQHLDISGNKLSGDFSRAISTCTELKLL 252
Query: 94 NAAHSKLEEEIP 105
N + ++ IP
Sbjct: 253 NISSNQFVGPIP 264
Score = 31.2 bits (69), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 60 FGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE 107
F + S+ FLD+S N L G IPK + L LN H+ + IP E
Sbjct: 628 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDE 675
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 16/92 (17%)
Query: 32 ILYIDLSSNSLSG-FLPS-------NIEKLKVLVDCF--------GSLTSLEFLDISNNN 75
+L +DLSSN+ SG LP+ +++L + + F + + L L +S N
Sbjct: 370 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNY 429
Query: 76 LFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE 107
L G IP S LS+L+ L + LE EIP E
Sbjct: 430 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQE 461
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 29 VECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFKGLS 88
++ + Y+ L+ N +G +P + G+ +L LD+S N+ +G +P F S
Sbjct: 268 LKSLQYLSLAENKFTGEIPDFLS---------GACDTLTGLDLSGNHFYGAVPPFFGSCS 318
Query: 89 RLKQLNAAHSKLEEEIPIERPLR 111
L+ L + + E+P++ L+
Sbjct: 319 LLESLALSSNNFSGELPMDTLLK 341
Score = 26.9 bits (58), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 32/111 (28%)
Query: 35 IDLSSNSLSGFLPSNIEKLKVLVDCFGSL-------------------TSLEFLDISNNN 75
+DLS+NS+SG +N+ VL D G L +LEFLD+S+NN
Sbjct: 156 LDLSANSISG---ANVVGW-VLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNN 211
Query: 76 LFGKIPKSFKG-LSRLKQLNAAHSKLEEEIP------IERPLRNILAQSFI 119
IP F G S L+ L+ + +KL + E L NI + F+
Sbjct: 212 FSTGIP--FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFV 260
Score = 26.9 bits (58), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 17/88 (19%)
Query: 35 IDLSSNSLSGFLPSNIEKLKV---LVD--------------CFGSLTSLEFLDISNNNLF 77
+DLS N SG LP ++ L +D C +L+ L + NN
Sbjct: 348 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 407
Query: 78 GKIPKSFKGLSRLKQLNAAHSKLEEEIP 105
GKIP + S L L+ + + L IP
Sbjct: 408 GKIPPTLSNCSELVSLHLSFNYLSGTIP 435
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 32 ILYIDLSSNSLSGFLP------SNIEKLKVLVDCF-------GSLTSLEFLDISNNNLFG 78
+ ++DLS N L G N +K+ + + G +L LD+ NN ++G
Sbjct: 199 LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYG 258
Query: 79 KIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWNYTLCGPPRLQVPSC 135
+P+ L L LN + + L EIP L+ ++ N LCG P +P+C
Sbjct: 259 TLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP---LPAC 312
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
+LE V H+ +VH DLKP+NIL+D+NM
Sbjct: 209 LLEAVSFLHANNIVHRDLKPENILLDDNM 237
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 33.9 bits (76), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
IL+ + H H +VH D+KP NILID N
Sbjct: 120 ILDGIKHAHDMRIVHRDIKPQNILIDSN 147
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
IL+ VH+ HS + H DLKP+NI L+D+N+
Sbjct: 138 ILDGVHYLHSKRIAHFDLKPENIMLLDKNV 167
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
IL+ VH+ HS + H DLKP+NI L+D+N+
Sbjct: 117 ILDGVHYLHSKRIAHFDLKPENIMLLDKNV 146
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
IL+ VH+ HS + H DLKP+NI L+D+N+
Sbjct: 124 ILDGVHYLHSKRIAHFDLKPENIMLLDKNV 153
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 10/56 (17%)
Query: 174 CRNRNISDM-----LNIMID-----VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
C NR + D+ LN D ILE + + HS ++H DLKP NI IDE+
Sbjct: 97 CENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDES 152
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 157 LIMSIALITILILFCIRCRNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216
M + ++ LF C++ + +M + IL V + H ++VH DLKP+N+L+
Sbjct: 86 FFMVMEYVSGGELFDYICKHGRVEEMEARRL-FQQILSAVDYCHRHMVVHRDLKPENVLL 144
Query: 217 DENM 220
D +M
Sbjct: 145 DAHM 148
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 157 LIMSIALITILILFCIRCRNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216
M + ++ LF C++ + +M + IL V + H ++VH DLKP+N+L+
Sbjct: 86 FFMVMEYVSGGELFDYICKHGRVEEMEARRL-FQQILSAVDYCHRHMVVHRDLKPENVLL 144
Query: 217 DENM 220
D +M
Sbjct: 145 DAHM 148
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 3/32 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+V L LEY+H S +++ DLKP+NIL+D+N
Sbjct: 114 EVCLALEYLH---SKDIIYRDLKPENILLDKN 142
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 10/56 (17%)
Query: 174 CRNRNISDM-----LNIMID-----VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
C NR + D+ LN D ILE + + HS ++H +LKP NI IDE+
Sbjct: 97 CENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDES 152
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 157 LIMSIALITILILFCIRCRNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216
+ M + ++ LF C+N + + + + IL V + H ++VH DLKP+N+L+
Sbjct: 91 IFMVMEYVSGGELFDYICKNGRLDEKESRRL-FQQILSGVDYCHRHMVVHRDLKPENVLL 149
Query: 217 DENM 220
D +M
Sbjct: 150 DAHM 153
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
++ LEY+H ++H DLKP+NIL++E+M
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDM 169
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
ILE + + HS ++H DLKP NI IDE+
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFIDES 152
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
++ LEY+H ++H DLKP+NIL++E+M
Sbjct: 143 EIVSALEYLH---GKGIIHRDLKPENILLNEDM 172
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
++ LEY+H ++H DLKP+NIL++E+M
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDM 169
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
++ LEY+H ++H DLKP+NIL++E+M
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDM 169
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
++ LEY+H ++H DLKP+NIL++E+M
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDM 169
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
++ LEY+H ++H DLKP+NIL++E+M
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDM 170
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
++ LEY+H ++H DLKP+NIL++E+M
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDM 170
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
++ LEY+H ++H DLKP+NIL++E+M
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDM 167
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
++ LEY+H ++H DLKP+NIL++E+M
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDM 169
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
++ LEY+H ++H DLKP+NIL++E+M
Sbjct: 116 EIVSALEYLH---GKGIIHRDLKPENILLNEDM 145
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
++ LEY+H ++H DLKP+NIL++E+M
Sbjct: 117 EIVSALEYLH---GKGIIHRDLKPENILLNEDM 146
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
++ LEY+H ++H DLKP+NIL++E+M
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDM 167
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
++ LEY+H ++H DLKP+NIL++E+M
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDM 167
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
++ LEY+H ++H DLKP+NIL++E+M
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDM 169
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
++ LEY+H ++H DLKP+NIL++E+M
Sbjct: 115 EIVSALEYLH---GKGIIHRDLKPENILLNEDM 144
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
++ LEY+H ++H DLKP+NIL++E+M
Sbjct: 118 EIVSALEYLH---GKGIIHRDLKPENILLNEDM 147
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
++ LEY+H ++H DLKP+NIL++E+M
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDM 167
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
++ LEY+H ++H DLKP+NIL++E+M
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDM 166
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
++ LEY+H ++H DLKP+NIL++E+M
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDM 166
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
++ LEY+H ++H DLKP+NIL++E+M
Sbjct: 145 EIVSALEYLH---GKGIIHRDLKPENILLNEDM 174
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
++ LEY+H ++H DLKP+NIL++E+M
Sbjct: 122 EIVSALEYLH---GKGIIHRDLKPENILLNEDM 151
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 45 FLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGK--IPKSFKGLSRLKQLNAAHSK 99
++ N++KL + V C L +L+ LD+S+N++ K LS L+ LN +H++
Sbjct: 328 YIRGNVKKLHLGVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNE 384
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 60 FGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEE 102
FG L L L++ N L G P +F+G S +++L +K++E
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKE 92
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 31.2 bits (69), Expect = 0.52, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+DM ++ L LE H H+ +V+ DLKP NIL+DE+
Sbjct: 291 ADMRFYAAEIILGLE---HMHNRFVVYRDLKPANILLDEH 327
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 31.2 bits (69), Expect = 0.53, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+DM ++ L LE H H+ +V+ DLKP NIL+DE+
Sbjct: 292 ADMRFYAAEIILGLE---HMHNRFVVYRDLKPANILLDEH 328
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 30.8 bits (68), Expect = 0.55, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+DM ++ L LE H H+ +V+ DLKP NIL+DE+
Sbjct: 292 ADMRFYAAEIILGLE---HMHNRFVVYRDLKPANILLDEH 328
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 30.8 bits (68), Expect = 0.55, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+DM ++ L LE H H+ +V+ DLKP NIL+DE+
Sbjct: 292 ADMRFYAAEIILGLE---HMHNRFVVYRDLKPANILLDEH 328
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 14/80 (17%)
Query: 29 VECILYIDLSSNSLSGFLPSNIEK---LKVLV-----------DCFGSLTSLEFLDISNN 74
E + +DLS+N ++ S++++ L+ LV D F SL SLE LD+S N
Sbjct: 25 TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYN 84
Query: 75 NLFGKIPKSFKGLSRLKQLN 94
L FK LS L LN
Sbjct: 85 YLSNLSSSWFKPLSSLTFLN 104
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 193 LEYVHHDHSTLMVHCDLKPDNILIDEN 219
LEY+H ++H DLKP+N+L+DEN
Sbjct: 125 LEYLHQH---WILHRDLKPNNLLLDEN 148
>pdb|3A79|A Chain A, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
pdb|3A7B|A Chain A, Crystal Structure Of Tlr2-Streptococcus Pneumoniae
Lipoteichoic Acid Complex
pdb|3A7C|A Chain A, Crystal Structure Of Tlr2-Pe-Dtpa Complex
Length = 580
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 22/37 (59%)
Query: 58 DCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLN 94
D F SL SLE LD+S+N+L F LS LK LN
Sbjct: 94 DAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLN 130
>pdb|2Z81|A Chain A, Crystal Structure Of The Tlr1-tlr2 Heterodimer Induced By
Binding Of A Tri-acylated Lipopeptide
pdb|2Z82|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 22/37 (59%)
Query: 58 DCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLN 94
D F SL SLE LD+S+N+L F LS LK LN
Sbjct: 68 DAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLN 104
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 30.4 bits (67), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 14/80 (17%)
Query: 29 VECILYIDLSSNSLSGFLPSNIEK---LKVLV-----------DCFGSLTSLEFLDISNN 74
E + +DLS+N ++ S++++ L+ LV D F SL SLE LD+S N
Sbjct: 51 TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYN 110
Query: 75 NLFGKIPKSFKGLSRLKQLN 94
L FK LS L LN
Sbjct: 111 YLSNLSSSWFKPLSSLTFLN 130
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 30.4 bits (67), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 200 HSTLMVHCDLKPDNILIDEN 219
HS ++H DLKP N+L++EN
Sbjct: 175 HSAQVIHRDLKPSNLLVNEN 194
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 46 LPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKL 100
+ N + L D F L +L FLD+S L P +F LS L+ LN +H+
Sbjct: 476 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 530
Score = 27.3 bits (59), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 27/79 (34%)
Query: 63 LTSLEFLDISNNNL----------FGKI---------------PKSFKGLSRLKQLNAAH 97
L SLEFLD+S N L FG I +F GL +L+ L+ H
Sbjct: 370 LPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQH 429
Query: 98 SKLEE--EIPIERPLRNIL 114
S L++ E + LRN++
Sbjct: 430 SNLKQMSEFSVFLSLRNLI 448
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 30.4 bits (67), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 200 HSTLMVHCDLKPDNILIDEN 219
HS ++H DLKP N+L++EN
Sbjct: 176 HSAQVIHRDLKPSNLLVNEN 195
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 30.4 bits (67), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 46 LPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIP 105
+ N + L D F L +L FLD+S L P +F LS L+ LN A ++L + +P
Sbjct: 452 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQL-KSVP 510
Query: 106 ---IER--PLRNILAQSFIWNYTLCGPPRL 130
+R L+ I + W+ C PR+
Sbjct: 511 DGIFDRLTSLQKIWLHTNPWD---CSCPRI 537
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 30.4 bits (67), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 46 LPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKL 100
+ N + L D F L +L FLD+S L P +F LS L+ LN +H+
Sbjct: 452 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 506
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
D+ + ++AL L+ H HS +++ DLKP+NIL+DE
Sbjct: 126 EDVKFYLAELALALD---HLHSLGIIYRDLKPENILLDEE 162
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
D+ + ++AL L+ H HS +++ DLKP+NIL+DE
Sbjct: 127 EDVKFYLAELALALD---HLHSLGIIYRDLKPENILLDEE 163
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 30.4 bits (67), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
D+ + ++AL L+ H HS +++ DLKP+NIL+DE
Sbjct: 126 EDVKFYLAELALALD---HLHSLGIIYRDLKPENILLDEE 162
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 30.4 bits (67), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LIDE
Sbjct: 137 IVLTFEYLH---SLDLIYRDLKPENLLIDEQ 164
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 30.4 bits (67), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 200 HSTLMVHCDLKPDNILIDEN 219
H ++HCDLKP+NIL+ +
Sbjct: 217 HKNRIIHCDLKPENILLKQQ 236
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 30.4 bits (67), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 200 HSTLMVHCDLKPDNILIDEN 219
H ++HCDLKP+NIL+ +
Sbjct: 217 HKNRIIHCDLKPENILLKQQ 236
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 30.4 bits (67), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 200 HSTLMVHCDLKPDNILIDEN 219
H ++HCDLKP+NIL+ +
Sbjct: 217 HKNRIIHCDLKPENILLKQQ 236
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 30.4 bits (67), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILI 216
ILE V+H H +VH DLKP+N+L+
Sbjct: 139 ILESVNHIHQHDIVHRDLKPENLLL 163
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 30.4 bits (67), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 46 LPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKL 100
+ N + L D F L +L FLD+S L P +F LS L+ LN +H+
Sbjct: 157 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 211
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 30.4 bits (67), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
I+ V + H +VH DLKP+N+L+DE++
Sbjct: 121 IISAVEYCHRHKIVHRDLKPENLLLDEHL 149
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 30.0 bits (66), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
I+ V + H +VH DLKP+N+L+DE++
Sbjct: 122 IISAVEYCHRHKIVHRDLKPENLLLDEHL 150
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
+LE VH H +VH DLKP N LI + M
Sbjct: 116 MLEAVHTIHQHGIVHSDLKPANFLIVDGM 144
>pdb|3R3L|A Chain A, Structure Of Np Protein From Lassa Av Strain
pdb|3R3L|B Chain B, Structure Of Np Protein From Lassa Av Strain
pdb|3R3L|C Chain C, Structure Of Np Protein From Lassa Av Strain
Length = 582
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 29 VECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISN-NNLFGKIPKSFKGL 87
V+ L+ LSG+ SNI KL+V+ D L L+F ++SN L K + L
Sbjct: 7 VKSFLWTQSLRRELSGYC-SNI-KLQVVKDAQALLHGLDFSEVSNVQRLMRKQRRDDSDL 64
Query: 88 SRLKQLNAAHSKLEE 102
RL+ LN A + L E
Sbjct: 65 KRLRDLNQAVNNLVE 79
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
+LE VH H +VH DLKP N LI + M
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIVDGM 192
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
+LE VH H +VH DLKP N LI + M
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIVDGM 192
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 30.0 bits (66), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
+LE VH H +VH DLKP N LI + M
Sbjct: 120 MLEAVHTIHQHGIVHSDLKPANFLIVDGM 148
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
I+ V + H +VH DLKP+N+L+DE++
Sbjct: 112 IISAVEYCHRHKIVHRDLKPENLLLDEHL 140
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 30.0 bits (66), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
+LE VH H +VH DLKP N LI + M
Sbjct: 117 MLEAVHTIHQHGIVHSDLKPANFLIVDGM 145
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
I+ V + H +VH DLKP+N+L+DE++
Sbjct: 116 IISAVEYCHRHKIVHRDLKPENLLLDEHL 144
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILI 216
+ ILE V++ H +VH DLKP NIL+
Sbjct: 137 IKQILEGVYYLHQNNIVHLDLKPQNILL 164
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILI 216
+ ILE V+H H +VH DLKP+N+L+
Sbjct: 109 IQQILESVNHCHLNGIVHRDLKPENLLL 136
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
+LE VH H +VH DLKP N LI + M
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLIVDGM 164
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
+LE VH H +VH DLKP N LI + M
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLIVDGM 164
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 18/58 (31%)
Query: 174 CRNRNISDMLN---------------IMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216
CR N+ D +N I I +A +E++H S ++H DLKP NI
Sbjct: 143 CRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFF 197
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 157 LIMSIALITILILFCIRCRNRNISDMLNIMI-DVALILEYVHHDHSTLMVHCDLKPDNIL 215
L+M + L+ + ++ DM I ++ L ++ +H H VH D+KPDN+L
Sbjct: 167 LVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH---YVHRDIKPDNVL 223
Query: 216 IDEN 219
+D N
Sbjct: 224 LDVN 227
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
+LE VH H +VH DLKP N LI + M
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIVDGM 192
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 38 SSNSLSGFLPSNIEKLKVLVD--------CFGSLTSLEFLDISNNNLFGKIPKSFKGLSR 89
S ++ SG +N+ +L + + F L SL +L + NN+ P+SF GLS
Sbjct: 238 SESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSN 297
Query: 90 LKQLNAAHSKLEEEIPI-ERPLRNILAQSFIW 120
L+ L+ + ++ + + P NI SF W
Sbjct: 298 LRYLSLKRAFTKQSVSLASHP--NIDDFSFQW 327
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILI 216
+ ILE V+H H +VH DLKP+N+L+
Sbjct: 109 IQQILESVNHCHLNGIVHRDLKPENLLL 136
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 157 LIMSIALITILILFCIRCRNRNISDMLNIMI-DVALILEYVHHDHSTLMVHCDLKPDNIL 215
L+M + L+ + ++ DM I ++ L ++ +H H VH D+KPDN+L
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH---YVHRDIKPDNVL 207
Query: 216 IDEN 219
+D N
Sbjct: 208 LDVN 211
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 200 HSTLMVHCDLKPDNILIDENM 220
H +VH DLKP+NIL+D++M
Sbjct: 128 HKLNIVHRDLKPENILLDDDM 148
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 200 HSTLMVHCDLKPDNILIDENM 220
H +VH DLKP+NIL+D++M
Sbjct: 141 HKLNIVHRDLKPENILLDDDM 161
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 200 HSTLMVHCDLKPDNILIDENM 220
H +VH DLKP+NIL+D++M
Sbjct: 141 HKLNIVHRDLKPENILLDDDM 161
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 148 LLILKYIFPLIMSIALITILI----LFCIRCRNRNISDMLNIMIDVALILEYVHHDHSTL 203
++ LK IF I+L+ L+ LF R + + V ILE V + H
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFD-RIVEKGYYSERDAADAVKQILEAVAYLHENG 168
Query: 204 MVHCDLKPDNIL 215
+VH DLKP+N+L
Sbjct: 169 IVHRDLKPENLL 180
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
Query: 37 LSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKI-PKSFKGLSRLKQLNA 95
L SN+L+G + F LT LE LD+S+N + P +F+GL L L+
Sbjct: 62 LHSNALAG----------IDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHL 111
Query: 96 AHSKLEEEIP 105
L+E P
Sbjct: 112 DRCGLQELGP 121
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 119 VLEAVRHCHNXGVLHRDIKDENILIDLN 146
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
D+ + ++AL L+ H HS +++ DLKP+NIL+DE
Sbjct: 130 EDVKFYLAELALGLD---HLHSLGIIYRDLKPENILLDEE 166
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILI 216
+ ILE V H H +VH DLKP+N+L+
Sbjct: 127 IQQILEAVLHCHQMGVVHRDLKPENLLL 154
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
I+ V + H +VH DLK +N+L+D +M
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADM 150
>pdb|3MWP|A Chain A, Nucleoprotein Structure Of Lassa Fever Virus
pdb|3MWP|B Chain B, Nucleoprotein Structure Of Lassa Fever Virus
pdb|3MWP|C Chain C, Nucleoprotein Structure Of Lassa Fever Virus
pdb|3MWT|A Chain A, Crystal Structure Of Lassa Fever Virus Nucleoprotein In
Complex With Mn2+
pdb|3MWT|B Chain B, Crystal Structure Of Lassa Fever Virus Nucleoprotein In
Complex With Mn2+
pdb|3MWT|C Chain C, Crystal Structure Of Lassa Fever Virus Nucleoprotein In
Complex With Mn2+
pdb|3MX2|A Chain A, Lassa Fever Virus Nucleoprotein Complexed With Dttp
pdb|3MX2|B Chain B, Lassa Fever Virus Nucleoprotein Complexed With Dttp
pdb|3MX2|C Chain C, Lassa Fever Virus Nucleoprotein Complexed With Dttp
pdb|3MX5|A Chain A, Lassa Fever Virus Nucleoprotein Complexed With Utp
pdb|3MX5|B Chain B, Lassa Fever Virus Nucleoprotein Complexed With Utp
pdb|3MX5|C Chain C, Lassa Fever Virus Nucleoprotein Complexed With Utp
Length = 577
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 29 VECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISN-NNLFGKIPKSFKGL 87
++ L+ LSG+ SNI KL+V+ D L L+F ++SN L K + L
Sbjct: 15 IKSFLWTQSLRRELSGYC-SNI-KLQVVKDAQALLHGLDFSEVSNVQRLMRKERRDDNDL 72
Query: 88 SRLKQLNAAHSKLEE 102
RL+ LN A + L E
Sbjct: 73 KRLRDLNQAVNNLVE 87
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 200 HSTLMVHCDLKPDNILIDENM 220
H +VH DLKP+N+L+D+N+
Sbjct: 125 HRHKIVHRDLKPENLLLDDNL 145
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
I+ V + H +VH DLK +N+L+D +M
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADM 150
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
I+ V + H +VH DLK +N+L+D +M
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADM 150
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
I+ V + H +VH DLK +N+L+D +M
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADM 150
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
I+ V + H +VH DLK +N+L+D +M
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADM 150
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILI 216
+ ILE V H H +VH DLKP+N+L+
Sbjct: 109 IQQILEAVLHCHQMGVVHRDLKPENLLL 136
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 178
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 198
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
IL V++ HS + H DLKP+NI L+D N+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
I+ V + H +VH DLK +N+L+D +M
Sbjct: 115 IVSAVQYCHQKFIVHRDLKAENLLLDADM 143
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 198
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLN 193
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 145 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 172
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLN 151
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 178
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 198
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
A I+ + H H +++ DLKP+N+L+D++
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDD 325
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 178
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
IL V++ HS + H DLKP+NI L+D N+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 178
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLN 151
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 178
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 178
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLN 193
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLN 179
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
A I+ + H H +++ DLKP+N+L+D++
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDD 325
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLN 178
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLN 166
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLN 166
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLN 179
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLN 179
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
A I+ + H H +++ DLKP+N+L+D++
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDD 325
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 178
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 171 VLEAVRHCHNCGVLHRDIKDENILIDLN 198
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
+ IL+ V++ H+ + H DLKP+NI L+D+N+
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI 153
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLN 165
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
IL V++ HS + H DLKP+NI L+D N+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLN 150
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 143 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 170
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 143 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 170
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
+ IL+ V++ H+ + H DLKP+NI L+D+N+
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI 153
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
A I+ + H H +++ DLKP+N+L+D++
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDD 325
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 158 VLEAVRHCHNCGVLHRDIKDENILIDLN 185
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLN 179
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
IL V++ HS + H DLKP+NI L+D N+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLN 178
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLN 178
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLN 178
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 146 VLEAVRHCHNCGVLHRDIKDENILIDLN 173
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLN 166
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
Query: 143 SKKDTLLILKYIFPLIMSIALITILILFCIRCRNRNISDMLNIMIDVALILEYVHHDHST 202
SK D +L+++Y+ + +I + N++++ I+ + I E + H H
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIID---------ESYNLTELDTILF-MKQICEGIRHMHQM 206
Query: 203 LMVHCDLKPDNIL 215
++H DLKP+NIL
Sbjct: 207 YILHLDLKPENIL 219
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLN 165
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 178
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 177
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N+LID+
Sbjct: 136 IVLTFEYLH---SLDLIYRDLKPENLLIDQQ 163
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217
N + ++ DVA L+++H + + H DLKP+NIL +
Sbjct: 109 NEREASRVVRDVAAALDFLH---TKGIAHRDLKPENILCE 145
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 122 VLEAVRHCHNCGVLHRDIKDENILIDLN 149
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218
NI +M N+ + + +L + + H ++H DLKP N+LI+E
Sbjct: 95 NIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINE 135
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLN 151
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLN 146
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLN 150
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLN 146
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 173 RCRNRNISD--MLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ R + +S+ + +M + L Y H H +VH DLKP+NIL +
Sbjct: 115 QARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDT 160
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+LE V H H+ ++H D+K +NILID N
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLN 193
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
+ IL+ V++ H+ + H DLKP+NI L+D+N+
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI 153
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILI 216
IL+ +H+ H+ ++H DLKP NIL+
Sbjct: 137 ILDGIHYLHANWVLHRDLKPANILV 161
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216
+++ ++++ V L Y+H S +VH D+KP NI I
Sbjct: 111 AELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFI 144
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216
+++ ++++ V L Y+H S +VH D+KP NI I
Sbjct: 113 AELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
+ IL+ V++ H+ + H DLKP+NI L+D+N+
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI 153
>pdb|3T5Q|A Chain A, 3a Structure Of Lassa Virus Nucleoprotein In Complex With
Ssrna
pdb|3T5Q|B Chain B, 3a Structure Of Lassa Virus Nucleoprotein In Complex With
Ssrna
pdb|3T5Q|E Chain E, 3a Structure Of Lassa Virus Nucleoprotein In Complex With
Ssrna
pdb|3T5Q|G Chain G, 3a Structure Of Lassa Virus Nucleoprotein In Complex With
Ssrna
pdb|3T5Q|I Chain I, 3a Structure Of Lassa Virus Nucleoprotein In Complex With
Ssrna
pdb|3T5Q|K Chain K, 3a Structure Of Lassa Virus Nucleoprotein In Complex With
Ssrna
Length = 353
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 29 VECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISN-NNLFGKIPKSFKGL 87
++ L+ LSG+ SNI KL+V+ D L L+F ++SN L K + L
Sbjct: 20 IKSFLWTQSLRRELSGYC-SNI-KLQVVKDAQALLHGLDFSEVSNVQRLMRKERRDDNDL 77
Query: 88 SRLKQLNAAHSKLEE 102
RL+ LN A + L E
Sbjct: 78 KRLRDLNQAVNNLVE 92
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216
+++ ++++ V L Y+H S +VH D+KP NI I
Sbjct: 115 AELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFI 148
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
IL V++ HS + H DLKP+NI L+D N+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 18/58 (31%)
Query: 174 CRNRNISDMLN---------------IMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216
CR N+ D +N I + +A +E++H S ++H DLKP NI
Sbjct: 97 CRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFF 151
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216
+++ ++++ V L Y+H S +VH D+KP NI I
Sbjct: 113 AELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
IL V++ HS + H DLKP+NI L+D N+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
+ IL+ V++ H+ + H DLKP+NI L+D+N+
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI 153
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
IL V++ HS + H DLKP+NI L+D N+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
IL V++ HS + H DLKP+NI L+D N+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|3T5N|A Chain A, 1.8a Crystal Structure Of Lassa Virus Nucleoprotein In
Complex With Ssrna
Length = 354
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 29 VECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISN-NNLFGKIPKSFKGL 87
++ L+ LSG+ SNI KL+V+ D L L+F ++SN L K + L
Sbjct: 21 IKSFLWTQSLRRELSGYC-SNI-KLQVVKDAQALLHGLDFSEVSNVQRLMRKERRDDNDL 78
Query: 88 SRLKQLNAAHSKLEE 102
RL+ LN A + L E
Sbjct: 79 KRLRDLNQAVNNLVE 93
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
+ IL+ V++ H+ + H DLKP+NI L+D+N+
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI 153
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Query: 186 MIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ ++ + ++ VH H VH D+KPDNIL+D N
Sbjct: 181 LAEMVIAIDSVHQLH---YVHRDIKPDNILMDMN 211
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
IL V++ HS + H DLKP+NI L+D N+
Sbjct: 122 ILNGVYYLHSLQIAHFDLKPENIMLLDRNV 151
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
IL V++ HS + H DLKP+NI L+D N+
Sbjct: 122 ILNGVYYLHSLQIAHFDLKPENIMLLDRNV 151
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
IL V++ HS + H DLKP+NI L+D N+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
IL V++ HS + H DLKP+NI L+D N+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
IL V++ HS + H DLKP+NI L+D N+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNI-LIDENM 220
IL V++ HS + H DLKP+NI L+D N+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
Query: 188 DVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
++ + L+Y+ + ++H D+KPDNIL+DE+
Sbjct: 123 ELVMALDYLQNQR---IIHRDMKPDNILLDEH 151
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Query: 183 LNIMIDVALILEYVHHDHSTLMVHCDLKPDNIL---IDEN 219
L +M+D+AL +EY+ + + + VH DL+ NI +DEN
Sbjct: 125 LRLMLDIALGIEYMQNQNPPI-VHRDLRSPNIFLQSLDEN 163
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Query: 183 LNIMIDVALILEYVHHDHSTLMVHCDLKPDNIL---IDEN 219
L +M+D+AL +EY+ + + + VH DL+ NI +DEN
Sbjct: 125 LRLMLDIALGIEYMQNQNPPI-VHRDLRSPNIFLQSLDEN 163
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Query: 183 LNIMIDVALILEYVHHDHSTLMVHCDLKPDNIL---IDEN 219
L +M+D+AL +EY+ + + + VH DL+ NI +DEN
Sbjct: 125 LRLMLDIALGIEYMQNQNPPI-VHRDLRSPNIFLQSLDEN 163
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 153 YIFPLIMSIALITILILFCIRCRNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPD 212
Y F L+M + + ++ I ++ M+ L+Y+H S +VH DLKP
Sbjct: 102 YDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKG---LKYIH---SAGVVHRDLKPG 155
Query: 213 NILIDEN 219
N+ ++E+
Sbjct: 156 NLAVNED 162
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 142 GSKKDTLLILKYIFPLIMSIALITILI------LFCIRCRNRNISDMLNIMIDVALILEY 195
GS + L + Y P A++ L+ LF + R + +L I I + +EY
Sbjct: 53 GSAGEGLPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEY 112
Query: 196 VHHDHSTLMVHCDLKPDNILI 216
VH S +++ D+KP+N LI
Sbjct: 113 VH---SKNLIYRDVKPENFLI 130
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N++ID+
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLMIDQQ 178
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
I+ V + H +VH DLK +N+L+D +M
Sbjct: 123 IVSAVQYCHQKRIVHRDLKAENLLLDADM 151
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
I+ V + H +VH DLK +N+L+D +M
Sbjct: 120 IVSAVQYCHQKRIVHRDLKAENLLLDADM 148
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N++ID+
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLMIDQQ 178
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N++ID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQ 177
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N++ID+
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLMIDQQ 178
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N++ID+
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLMIDQQ 178
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N++ID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQ 177
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 63 LTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLE 101
L L+ LD+S N+L P SF+GL L++L S+++
Sbjct: 206 LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ 244
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N++ID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQ 177
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N++ID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQ 177
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N++ID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQ 177
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 62 SLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKL 100
+L LE L++S N L P SF+GL+ L++L H+++
Sbjct: 176 ALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQV 214
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 62 SLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKL 100
+L LE L++S N L P SF+GL+ L++L H+++
Sbjct: 176 ALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQV 214
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 183 LNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
L I I A L Y+H + ++H D+K NIL+DEN
Sbjct: 142 LEICIGAARGLHYLH---TRAIIHRDVKSINILLDENF 176
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 17/20 (85%)
Query: 200 HSTLMVHCDLKPDNILIDEN 219
HS ++H D+KPDN+L+D++
Sbjct: 191 HSMGLIHRDVKPDNMLLDKH 210
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ L EY+H S +++ DLKP+N++ID+
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLIIDQQ 177
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 183 LNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220
L I I A L Y+H + ++H D+K NIL+DEN
Sbjct: 142 LEICIGAARGLHYLH---TRAIIHRDVKSINILLDENF 176
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILI 216
I V H HS ++H DLKP NIL+
Sbjct: 142 IASGVAHLHSLKIIHRDLKPQNILV 166
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILID 217
++ + H HS +VH D+K +NILID
Sbjct: 148 VVAAIQHCHSRGVVHRDIKDENILID 173
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 13/73 (17%)
Query: 29 VECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFKGLS 88
E IL ++LSSN L+G + C ++ LD+ NN + IPK L
Sbjct: 427 AESILVLNLSSNMLTG----------SVFRCLPP--KVKVLDLHNNRIMS-IPKDVTHLQ 473
Query: 89 RLKQLNAAHSKLE 101
L++LN A ++L+
Sbjct: 474 ALQELNVASNQLK 486
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILI 216
I V H HS ++H DLKP NIL+
Sbjct: 142 IASGVAHLHSLKIIHRDLKPQNILV 166
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDENM 220
I+ V + H +VH DLK +N+L+D +M
Sbjct: 123 IVSAVQYCHQKYIVHRDLKAENLLLDGDM 151
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 182 MLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216
++N + +A + Y+H + ++H DLK NILI
Sbjct: 107 LVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILI 141
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDE 218
I+ V + HS H DLKP+N+L DE
Sbjct: 117 IVSAVAYVHSQGYAHRDLKPENLLFDE 143
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 28.1 bits (61), Expect = 4.4, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Query: 185 IMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216
++ D++ L Y+H + ++H DLKP+NI++
Sbjct: 127 LLSDISSALRYLHENR---IIHRDLKPENIVL 155
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 16/20 (80%)
Query: 200 HSTLMVHCDLKPDNILIDEN 219
HS +H D+KPDN+L+D++
Sbjct: 190 HSMGFIHRDVKPDNMLLDKS 209
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 28.1 bits (61), Expect = 4.4, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Query: 185 IMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216
++ D++ L Y+H + ++H DLKP+NI++
Sbjct: 126 LLSDISSALRYLHENR---IIHRDLKPENIVL 154
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 11/51 (21%)
Query: 180 SDMLNIMIDVALILEYVH-----------HDHSTLMVHCDLKPDNILIDEN 219
+D+ NI+ AL E+V + HS ++H DLKP N+ ++E+
Sbjct: 117 ADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNED 167
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 16/20 (80%)
Query: 200 HSTLMVHCDLKPDNILIDEN 219
HS +H D+KPDN+L+D++
Sbjct: 185 HSMGFIHRDVKPDNMLLDKS 204
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 16/20 (80%)
Query: 200 HSTLMVHCDLKPDNILIDEN 219
HS +H D+KPDN+L+D++
Sbjct: 190 HSMGFIHRDVKPDNMLLDKS 209
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 153 YIFPLIMSIALITILILFCIRCRNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPD 212
Y F L+M + + + I ++ M+ L+Y+H S +VH DLKP
Sbjct: 120 YDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKG---LKYIH---SAGVVHRDLKPG 173
Query: 213 NILIDEN 219
N+ ++E+
Sbjct: 174 NLAVNED 180
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 196 VHHDHSTLMVHCDLKPDNILI 216
V H HS ++H DLKP NIL+
Sbjct: 128 VAHLHSLKIIHRDLKPQNILV 148
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 196 VHHDHSTLMVHCDLKPDNILI 216
V H HS ++H DLKP NIL+
Sbjct: 128 VAHLHSLKIIHRDLKPQNILV 148
>pdb|1L9V|A Chain A, Non Structural Protein Encoded By Gene Segment 8 Of
Rotavirus (Nsp2), An Ntpase, Ssrna Binding And Nucleic
Acid Helix-Destabilizing Protein
pdb|4G0A|A Chain A, Crystallographic Analysis Of Rotavirus Nsp2-Rna Complex
Reveals Specific Recognition Of 5'-Gg Sequence For
Rtpase Activity
pdb|4G0A|B Chain B, Crystallographic Analysis Of Rotavirus Nsp2-Rna Complex
Reveals Specific Recognition Of 5'-Gg Sequence For
Rtpase Activity
pdb|4G0A|C Chain C, Crystallographic Analysis Of Rotavirus Nsp2-Rna Complex
Reveals Specific Recognition Of 5'-Gg Sequence For
Rtpase Activity
pdb|4G0A|D Chain D, Crystallographic Analysis Of Rotavirus Nsp2-Rna Complex
Reveals Specific Recognition Of 5'-Gg Sequence For
Rtpase Activity
Length = 317
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 YTLCGPPRLQVPSCKEDNSRGSKKDTLLILKYIFPLIMSIALITILILFCIRCRNRNISD 181
Y + PP+ + DNSRG +T++ K +A++ L ++ N+S+
Sbjct: 49 YGIAPPPQFKKRYNTNDNSRGMNFETIMFTK--------VAMLICEALNSLKVTQANVSN 100
Query: 182 MLNIMIDV 189
+L+ ++ +
Sbjct: 101 VLSRVVSI 108
>pdb|4G0J|A Chain A, Crystallographic Analysis Of Rotavirus Nsp2-Rna Complex
Reveals Specific Recognition Of 5'-Gg Sequence For
Rtpase Activity
pdb|4G0J|B Chain B, Crystallographic Analysis Of Rotavirus Nsp2-Rna Complex
Reveals Specific Recognition Of 5'-Gg Sequence For
Rtpase Activity
pdb|4G0J|C Chain C, Crystallographic Analysis Of Rotavirus Nsp2-Rna Complex
Reveals Specific Recognition Of 5'-Gg Sequence For
Rtpase Activity
pdb|4G0J|D Chain D, Crystallographic Analysis Of Rotavirus Nsp2-Rna Complex
Reveals Specific Recognition Of 5'-Gg Sequence For
Rtpase Activity
pdb|4G0J|E Chain E, Crystallographic Analysis Of Rotavirus Nsp2-Rna Complex
Reveals Specific Recognition Of 5'-Gg Sequence For
Rtpase Activity
pdb|4G0J|F Chain F, Crystallographic Analysis Of Rotavirus Nsp2-Rna Complex
Reveals Specific Recognition Of 5'-Gg Sequence For
Rtpase Activity
pdb|4G0J|G Chain G, Crystallographic Analysis Of Rotavirus Nsp2-Rna Complex
Reveals Specific Recognition Of 5'-Gg Sequence For
Rtpase Activity
pdb|4G0J|H Chain H, Crystallographic Analysis Of Rotavirus Nsp2-Rna Complex
Reveals Specific Recognition Of 5'-Gg Sequence For
Rtpase Activity
pdb|4G0J|I Chain I, Crystallographic Analysis Of Rotavirus Nsp2-Rna Complex
Reveals Specific Recognition Of 5'-Gg Sequence For
Rtpase Activity
pdb|4G0J|J Chain J, Crystallographic Analysis Of Rotavirus Nsp2-Rna Complex
Reveals Specific Recognition Of 5'-Gg Sequence For
Rtpase Activity
Length = 294
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 YTLCGPPRLQVPSCKEDNSRGSKKDTLLILKYIFPLIMSIALITILILFCIRCRNRNISD 181
Y + PP+ + DNSRG +T++ K +A++ L ++ N+S+
Sbjct: 49 YGIAPPPQFKKRYNTNDNSRGMNFETIMFTK--------VAMLICEALNSLKVTQANVSN 100
Query: 182 MLNIMIDV 189
+L+ ++ +
Sbjct: 101 VLSRVVSI 108
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 27.7 bits (60), Expect = 5.1, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218
+++ + ++++ L Y+H S +V+ DLKP+NI++ E
Sbjct: 181 VAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTE 217
>pdb|2R7C|A Chain A, Crystallographic And Biochemical Analysis Of Rotavirus
Nsp2 With Nucleotides Reveals An Ndp Kinase Like
Activity
Length = 317
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 YTLCGPPRLQVPSCKEDNSRGSKKDTLLILKYIFPLIMSIALITILILFCIRCRNRNISD 181
Y + PP+ + DNSRG +T++ K +A++ L ++ N+S+
Sbjct: 49 YGIAPPPQFKKRYNTNDNSRGMNFETIMFTK--------VAMLICEALNSLKVTQANVSN 100
Query: 182 MLNIMIDV 189
+L+ ++ +
Sbjct: 101 VLSRVVSI 108
>pdb|2R7J|A Chain A, Crystal Structure Of Rotavirus Non Structural Protein Nsp2
With H225a Mutation
pdb|2R7P|A Chain A, Crystal Structure Of H225a Nsp2 And Amppnp Complex
pdb|2R8F|A Chain A, Crystal Structure Of H225a Nsp2 And Atp-Gs Complex
Length = 317
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 122 YTLCGPPRLQVPSCKEDNSRGSKKDTLLILKYIFPLIMSIALITILILFCIRCRNRNISD 181
Y + PP+ + DNSRG +T++ K +A++ L ++ N+S+
Sbjct: 49 YGIAPPPQFKKRYNTNDNSRGMNFETIMFTK--------VAMLICEALNSLKVTQANVSN 100
Query: 182 MLNIMIDV 189
+L+ ++ +
Sbjct: 101 VLSRVVSI 108
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 183 LNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218
L++ DVA + Y+H+ + + VH DLK N+L+D+
Sbjct: 140 LSMAYDVAKGMNYLHNRNPPI-VHRDLKSPNLLVDK 174
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILI-DEN 219
++ V H H +VH DLKP+N+L DEN
Sbjct: 115 LVSAVSHMHDVGVVHRDLKPENLLFTDEN 143
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
Query: 176 NRNISDMLNIMIDVALI--LEYVHHDHSTLMVHCDLKPDNILI 216
+R S +MI + LI +EYVH S +++ D+KP+N LI
Sbjct: 99 DRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLI 138
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 43 SGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEE 102
S + P I+K + F +L +L LD+ ++ ++ P +F+GL L +L L +
Sbjct: 57 SQYTPLTIDK-----EAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSD 111
Query: 103 EIPIERPLRNILA 115
+ + RN+ A
Sbjct: 112 AVLKDGYFRNLKA 124
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 200 HSTLMVHCDLKPDNILIDEN 219
HS ++H DLKP N+ ++E+
Sbjct: 148 HSAGIIHRDLKPSNVAVNED 167
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
Query: 185 IMIDVALILEYVHHDHSTLMVHCDLKPDNIL-IDEN 219
++ + +EY+H S +VH DLKP NIL +DE+
Sbjct: 126 VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDES 158
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 20/28 (71%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILI 216
+ ILE + + HS +VH +LKP+N+L+
Sbjct: 134 IQQILESIAYCHSNGIVHRNLKPENLLL 161
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
Query: 176 NRNISDMLNIMIDVALI--LEYVHHDHSTLMVHCDLKPDNILI 216
+R S +MI + LI +EYVH S +++ D+KP+N LI
Sbjct: 99 DRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLI 138
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
Query: 176 NRNISDMLNIMIDVALI--LEYVHHDHSTLMVHCDLKPDNILI 216
+R S +MI + LI +EYVH S +++ D+KP+N LI
Sbjct: 120 DRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLI 159
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 200 HSTLMVHCDLKPDNILIDEN 219
HS ++H DLKP N+ ++E+
Sbjct: 140 HSAGIIHRDLKPSNVAVNED 159
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 184 NIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
I I + +L V H H ++H DLKP N+LI+ +
Sbjct: 120 QIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSD 155
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 184 NIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
I I + +L V H H ++H DLKP N+LI+ +
Sbjct: 120 QIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSD 155
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
Query: 185 IMIDVALILEYVHHDHSTLMVHCDLKPDNIL-IDEN 219
++ + +EY+H S +VH DLKP NIL +DE+
Sbjct: 126 VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDES 158
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 196 VHHDHSTLMVHCDLKPDNILI 216
+ H HS ++H DLKP NI++
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV 159
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILI 216
+ ILE V H H +VH +LKP+N+L+
Sbjct: 116 IQQILEAVLHCHQMGVVHRNLKPENLLL 143
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 27.3 bits (59), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 196 VHHDHSTLMVHCDLKPDNILI 216
+ H HS ++H DLKP NI++
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV 159
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 27.3 bits (59), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 9/13 (69%), Positives = 13/13 (100%)
Query: 204 MVHCDLKPDNILI 216
++HCDLKP+NIL+
Sbjct: 180 IIHCDLKPENILL 192
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 27.3 bits (59), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 9/13 (69%), Positives = 13/13 (100%)
Query: 204 MVHCDLKPDNILI 216
++HCDLKP+NIL+
Sbjct: 161 IIHCDLKPENILL 173
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 27.3 bits (59), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 9/13 (69%), Positives = 13/13 (100%)
Query: 204 MVHCDLKPDNILI 216
++HCDLKP+NIL+
Sbjct: 180 IIHCDLKPENILL 192
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 27.3 bits (59), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 184 NIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+ + + L Y+ H ++H D+KP NIL+DE
Sbjct: 128 KMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDER 161
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 196 VHHDHSTLMVHCDLKPDNILI 216
+ H HS ++H DLKP NI++
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV 159
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 16/84 (19%)
Query: 34 YIDLSSNSLSGFLPSNI--------------EKLKVLVD-CFGSLTSLEFLDISNNNLFG 78
Y+DL +NSL LP+ + KL+ L + F LTSL +L++S N L
Sbjct: 32 YLDLETNSLKS-LPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQS 90
Query: 79 KIPKSFKGLSRLKQLNAAHSKLEE 102
F L++LK+L ++L+
Sbjct: 91 LPNGVFDKLTQLKELALNTNQLQS 114
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 196 VHHDHSTLMVHCDLKPDNILI 216
+ H HS ++H DLKP NI++
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV 159
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 196 VHHDHSTLMVHCDLKPDNILIDEN 219
+ H HS ++H DLKP NI++ +
Sbjct: 141 IKHLHSAGIIHRDLKPSNIVVKSD 164
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 200 HSTLMVHCDLKPDNILID 217
H VH D+KPDNIL+D
Sbjct: 179 HRLGYVHRDIKPDNILLD 196
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 26.9 bits (58), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 196 VHHDHSTLMVHCDLKPDNILIDEN 219
+ H HS ++H DLKP NI++ +
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSD 162
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 26.9 bits (58), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
I+ V + H +VH DLK +N+L+D +
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDAD 149
>pdb|3REN|A Chain A, Cpf_2247, A Novel Alpha-Amylase From Clostridium
Perfringens
pdb|3REN|B Chain B, Cpf_2247, A Novel Alpha-Amylase From Clostridium
Perfringens
Length = 350
Score = 26.9 bits (58), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 51 EKLKVLVDCF-----GSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIP 105
E+ + LVD G+ T+L +LD+ L ++ K ++G+ + K+ EE+P
Sbjct: 151 EENETLVDYIDNYGKGNTTTLCYLDLPTXKLLSQVDKKWEGIYEKSNSIIENGKISEEVP 210
Query: 106 IERPL 110
+ R +
Sbjct: 211 LYRKV 215
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 26.9 bits (58), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILI 216
+L + H HS ++H DLKP NI++
Sbjct: 135 MLXGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 26.9 bits (58), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 196 VHHDHSTLMVHCDLKPDNILIDEN 219
+ H HS ++H DLKP NI++ +
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSD 162
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 26.9 bits (58), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+L + H HS ++H DLKP NI++ +
Sbjct: 135 MLXGIKHLHSAGIIHRDLKPSNIVVKSD 162
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 26.9 bits (58), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 169 LFCIRCRNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216
LF + R + +L I I + +EYVH + +++ D+KP+N L+
Sbjct: 89 LFDLCDRTFTLKTVLMIAIQLITRMEYVH---TKSLIYRDVKPENFLV 133
>pdb|2R2F|A Chain A, Ribonucleotide Reductase R2f Protein From Salmonella
Typhimurium (Oxidized)
pdb|2R2F|B Chain B, Ribonucleotide Reductase R2f Protein From Salmonella
Typhimurium (Oxidized)
pdb|1R2F|A Chain A, Ribonucleotide Reductase R2f Protein From Salmonella
Typhimurium
pdb|1R2F|B Chain B, Ribonucleotide Reductase R2f Protein From Salmonella
Typhimurium
pdb|2BQ1|I Chain I, Ribonucleotide Reductase Class 1b Holocomplex R1e,R2f From
Salmonella Typhimurium
pdb|2BQ1|J Chain J, Ribonucleotide Reductase Class 1b Holocomplex R1e,R2f From
Salmonella Typhimurium
Length = 319
Score = 26.9 bits (58), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 63 LTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQ 116
L+++ F++ + + I F L + K+++AA++ EE P++R + ILA
Sbjct: 91 LSNISFMEAVHARSYSSI---FSTLCQTKEVDAAYAWSEENPPLQRKAQIILAH 141
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 26.9 bits (58), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNILIDEN 219
+L + H HS ++H DLKP NI++ +
Sbjct: 128 MLXGIKHLHSAGIIHRDLKPSNIVVKSD 155
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 26.9 bits (58), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 182 MLNIMIDVALILEYVHH--DHSTLMVHCDLKPDNILID 217
+L +M + L L+ H D ++H DLKP N+ +D
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD 150
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 26.9 bits (58), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 182 MLNIMIDVALILEYVHH--DHSTLMVHCDLKPDNILID 217
+L +M + L L+ H D ++H DLKP N+ +D
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD 150
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 26.9 bits (58), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 196 VHHDHSTLMVHCDLKPDNILIDEN 219
+ H HS ++H DLKP NI++ +
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSD 162
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 26.9 bits (58), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 196 VHHDHSTLMVHCDLKPDNILIDEN 219
+ H HS ++H DLKP NI++ +
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSD 162
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 196 VHHDHSTLMVHCDLKPDNILIDEN 219
+ H HS ++H DLKP NI++ +
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSD 163
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 20/28 (71%)
Query: 189 VALILEYVHHDHSTLMVHCDLKPDNILI 216
+ ILE + + HS +VH +LKP+N+L+
Sbjct: 111 IQQILESIAYCHSNGIVHRNLKPENLLL 138
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 196 VHHDHSTLMVHCDLKPDNILIDEN 219
+ H HS ++H DLKP NI++ +
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSD 162
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 196 VHHDHSTLMVHCDLKPDNILIDEN 219
+ H HS ++H DLKP NI++ +
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSD 162
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 200 HSTLMVHCDLKPDNILIDEN 219
HS ++H D+KP+N+L+ N
Sbjct: 129 HSKRVIHRDIKPENLLLGSN 148
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 26.9 bits (58), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 182 MLNIMIDVALILEYVHH--DHSTLMVHCDLKPDNILID 217
+L +M + L L+ H D ++H DLKP N+ +D
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD 150
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 26.9 bits (58), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 196 VHHDHSTLMVHCDLKPDNILIDEN 219
+ H HS ++H DLKP NI++ +
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSD 162
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 26.9 bits (58), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 192 ILEYVHHDHSTLMVHCDLKPDNIL 215
+L+ V++ H +VH DLKP+N+L
Sbjct: 129 VLDAVYYLHRMGIVHRDLKPENLL 152
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 26.9 bits (58), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Query: 187 IDVALILEYV----HHDHSTLMVHCDLKPDNILID 217
+D A I+ V + H +VH DLKP+N+L++
Sbjct: 126 VDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLE 160
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 26.9 bits (58), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 196 VHHDHSTLMVHCDLKPDNILIDEN 219
+ H HS ++H DLKP NI++ +
Sbjct: 144 IKHLHSAGIIHRDLKPSNIVVKSD 167
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 26.9 bits (58), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 196 VHHDHSTLMVHCDLKPDNILIDEN 219
+ H HS ++H DLKP NI++ +
Sbjct: 137 IKHLHSAGIIHRDLKPSNIVVKSD 160
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 26.9 bits (58), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 200 HSTLMVHCDLKPDNILIDEN 219
HS ++H D+KP+N+L+ N
Sbjct: 129 HSKRVIHRDIKPENLLLGSN 148
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 26.9 bits (58), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 200 HSTLMVHCDLKPDNILI 216
H+ +VH DLKP+NIL+
Sbjct: 129 HANCIVHRDLKPENILV 145
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 26.9 bits (58), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 200 HSTLMVHCDLKPDNILI 216
H+ +VH DLKP+NIL+
Sbjct: 129 HANCIVHRDLKPENILV 145
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 26.9 bits (58), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 196 VHHDHSTLMVHCDLKPDNILIDEN 219
+ H HS ++H DLKP NI++ +
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSD 162
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 26.9 bits (58), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 196 VHHDHSTLMVHCDLKPDNILIDEN 219
+ H HS ++H DLKP NI++ +
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSD 163
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.142 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,807,191
Number of Sequences: 62578
Number of extensions: 209289
Number of successful extensions: 1450
Number of sequences better than 100.0: 463
Number of HSP's better than 100.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 951
Number of HSP's gapped (non-prelim): 544
length of query: 220
length of database: 14,973,337
effective HSP length: 95
effective length of query: 125
effective length of database: 9,028,427
effective search space: 1128553375
effective search space used: 1128553375
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 49 (23.5 bits)