Query 038318
Match_columns 220
No_of_seqs 348 out of 2973
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 09:47:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038318.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038318hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 3.3E-29 7.2E-34 230.8 16.6 131 6-136 475-620 (968)
2 PLN03150 hypothetical protein; 99.8 3.2E-20 7E-25 163.2 9.9 118 7-136 419-538 (623)
3 PLN00113 leucine-rich repeat r 99.7 7.1E-17 1.5E-21 149.3 10.5 124 4-129 450-588 (968)
4 KOG0617 Ras suppressor protein 99.6 1.4E-16 3.1E-21 115.3 -2.5 117 3-122 30-161 (264)
5 PLN03150 hypothetical protein; 99.5 2.4E-13 5.1E-18 120.0 9.6 94 2-105 438-532 (623)
6 KOG0617 Ras suppressor protein 99.4 1.7E-15 3.6E-20 109.8 -4.1 123 2-129 52-190 (264)
7 KOG4194 Membrane glycoprotein 99.3 2.3E-13 5E-18 114.8 1.2 121 1-122 288-427 (873)
8 KOG1187 Serine/threonine prote 99.3 1.2E-12 2.5E-17 108.4 4.3 43 178-220 172-214 (361)
9 KOG0444 Cytoskeletal regulator 99.3 3E-13 6.5E-18 115.3 -0.8 120 5-128 244-379 (1255)
10 KOG0472 Leucine-rich repeat pr 99.3 5.3E-13 1.1E-17 108.2 -0.5 113 5-122 182-308 (565)
11 KOG4194 Membrane glycoprotein 99.2 4E-13 8.6E-18 113.4 -2.2 121 1-121 264-402 (873)
12 PF14580 LRR_9: Leucine-rich r 99.2 5.3E-12 1.1E-16 93.6 3.9 106 4-125 17-126 (175)
13 KOG0472 Leucine-rich repeat pr 99.2 2.8E-12 6.2E-17 104.0 2.1 108 2-121 431-538 (565)
14 KOG0444 Cytoskeletal regulator 99.2 6.8E-13 1.5E-17 113.1 -2.3 119 4-125 148-281 (1255)
15 KOG4237 Extracellular matrix p 99.1 5.4E-12 1.2E-16 102.1 -0.8 69 58-126 268-361 (498)
16 KOG0532 Leucine-rich repeat (L 99.1 6.5E-12 1.4E-16 105.8 -0.8 115 2-122 117-245 (722)
17 PF13855 LRR_8: Leucine rich r 99.1 5.1E-11 1.1E-15 73.2 2.4 61 6-76 1-61 (61)
18 KOG0618 Serine/threonine phosp 99.1 2.2E-11 4.7E-16 107.6 -0.2 107 3-123 380-488 (1081)
19 PF13855 LRR_8: Leucine rich r 99.1 9.7E-11 2.1E-15 71.9 2.6 61 30-100 1-61 (61)
20 PF14580 LRR_9: Leucine-rich r 99.0 5.7E-10 1.2E-14 82.8 5.5 102 4-118 40-147 (175)
21 KOG0618 Serine/threonine phosp 98.8 1.5E-10 3.2E-15 102.4 -3.1 105 5-121 358-462 (1081)
22 PLN03210 Resistant to P. syrin 98.8 1.1E-08 2.4E-13 96.5 8.4 59 64-122 778-836 (1153)
23 KOG4237 Extracellular matrix p 98.8 4.8E-10 1E-14 91.0 -1.5 119 7-126 68-203 (498)
24 cd00116 LRR_RI Leucine-rich re 98.8 1.1E-09 2.5E-14 89.0 0.5 112 4-121 79-203 (319)
25 PRK15387 E3 ubiquitin-protein 98.8 4.4E-09 9.5E-14 94.2 4.0 115 5-127 301-460 (788)
26 PRK15370 E3 ubiquitin-protein 98.8 1.9E-08 4.1E-13 90.3 7.2 38 7-48 263-300 (754)
27 KOG1259 Nischarin, modulator o 98.7 1.6E-09 3.5E-14 85.4 0.1 83 5-101 283-365 (490)
28 PLN03210 Resistant to P. syrin 98.7 3.2E-08 6.8E-13 93.5 8.3 104 6-121 611-714 (1153)
29 KOG0532 Leucine-rich repeat (L 98.7 3.1E-09 6.7E-14 90.0 1.1 92 7-102 144-248 (722)
30 KOG3653 Transforming growth fa 98.7 9.7E-08 2.1E-12 79.3 9.7 42 179-220 306-353 (534)
31 PRK15370 E3 ubiquitin-protein 98.7 5E-08 1.1E-12 87.6 7.9 107 7-125 200-317 (754)
32 PRK15387 E3 ubiquitin-protein 98.7 3.6E-08 7.8E-13 88.4 6.9 42 7-53 223-264 (788)
33 COG4886 Leucine-rich repeat (L 98.7 1.6E-08 3.4E-13 85.1 4.3 116 2-121 159-287 (394)
34 PF12799 LRR_4: Leucine Rich r 98.7 1.6E-08 3.5E-13 57.5 2.9 37 6-43 1-37 (44)
35 cd00116 LRR_RI Leucine-rich re 98.6 6E-09 1.3E-13 84.8 0.3 112 4-121 134-260 (319)
36 KOG0192 Tyrosine kinase specif 98.6 4.6E-08 1E-12 80.9 5.2 46 173-220 135-180 (362)
37 KOG1259 Nischarin, modulator o 98.6 1E-08 2.2E-13 81.0 -0.0 104 4-122 305-410 (490)
38 KOG1859 Leucine-rich repeat pr 98.5 4.6E-09 1E-13 91.3 -3.0 108 4-126 185-294 (1096)
39 COG4886 Leucine-rich repeat (L 98.5 7.3E-08 1.6E-12 81.0 2.1 115 4-121 114-242 (394)
40 KOG0592 3-phosphoinositide-dep 98.4 3.5E-07 7.7E-12 77.2 5.2 36 182-220 176-211 (604)
41 KOG4579 Leucine-rich repeat (L 98.4 3.2E-08 6.9E-13 69.6 -1.4 101 8-121 29-133 (177)
42 KOG4579 Leucine-rich repeat (L 98.4 3.2E-08 6.9E-13 69.6 -1.8 110 3-126 50-160 (177)
43 KOG0531 Protein phosphatase 1, 98.3 3.1E-07 6.8E-12 77.8 2.0 105 2-121 91-196 (414)
44 PF12799 LRR_4: Leucine Rich r 98.3 6.2E-07 1.4E-11 50.9 2.5 36 65-101 2-37 (44)
45 KOG0584 Serine/threonine prote 98.3 1.1E-06 2.3E-11 75.5 5.0 51 168-219 131-181 (632)
46 KOG0585 Ca2+/calmodulin-depend 98.3 8.5E-07 1.8E-11 74.0 4.3 39 179-220 209-247 (576)
47 KOG0598 Ribosomal protein S6 k 98.3 1.1E-06 2.3E-11 71.0 4.7 36 182-220 127-162 (357)
48 KOG0616 cAMP-dependent protein 98.3 1.4E-06 3.1E-11 68.7 4.8 49 169-220 133-181 (355)
49 KOG0581 Mitogen-activated prot 98.2 1.3E-06 2.7E-11 70.7 3.3 38 180-219 178-215 (364)
50 KOG1989 ARK protein kinase fam 98.2 2.2E-06 4.8E-11 75.9 5.2 43 177-220 141-183 (738)
51 KOG1859 Leucine-rich repeat pr 98.2 1.4E-07 3E-12 82.4 -2.7 99 7-121 165-264 (1096)
52 KOG0984 Mitogen-activated prot 98.1 2E-06 4.4E-11 64.7 2.8 38 181-220 149-186 (282)
53 KOG4658 Apoptotic ATPase [Sign 98.1 1.3E-06 2.9E-11 79.9 2.2 83 4-97 569-651 (889)
54 cd05102 PTKc_VEGFR3 Catalytic 98.1 4.2E-06 9.1E-11 68.7 4.9 39 178-219 172-210 (338)
55 KOG0594 Protein kinase PCTAIRE 98.1 3.7E-06 8E-11 67.6 4.2 37 181-220 121-157 (323)
56 KOG0193 Serine/threonine prote 98.1 2.6E-06 5.7E-11 73.0 3.1 38 179-219 487-524 (678)
57 KOG2052 Activin A type IB rece 98.1 3.2E-05 7E-10 64.3 9.1 41 179-219 307-352 (513)
58 KOG3207 Beta-tubulin folding c 98.1 8E-07 1.7E-11 73.4 -0.2 40 4-43 144-185 (505)
59 KOG4658 Apoptotic ATPase [Sign 98.0 2.8E-06 6E-11 77.8 2.9 106 4-121 543-652 (889)
60 PHA02882 putative serine/threo 98.0 6.6E-06 1.4E-10 66.3 4.3 39 178-219 124-162 (294)
61 cd05076 PTK_Tyk2_rpt1 Pseudoki 98.0 9.7E-06 2.1E-10 64.6 5.0 40 176-218 113-152 (274)
62 KOG0658 Glycogen synthase kina 98.0 5.3E-06 1.1E-10 67.1 3.3 34 183-219 128-161 (364)
63 PHA03212 serine/threonine kina 98.0 9.9E-06 2.1E-10 68.2 5.1 41 176-219 178-218 (391)
64 cd05077 PTK_Jak1_rpt1 Pseudoki 98.0 1.4E-05 3E-10 63.3 5.3 40 177-219 102-141 (262)
65 cd05594 STKc_PKB_alpha Catalyt 98.0 2E-05 4.3E-10 64.5 6.3 41 176-219 91-132 (325)
66 cd05096 PTKc_DDR1 Catalytic do 98.0 8.9E-06 1.9E-10 65.7 4.2 39 178-219 136-174 (304)
67 cd07862 STKc_CDK6 Catalytic do 97.9 9.5E-06 2.1E-10 65.0 4.2 39 178-219 108-146 (290)
68 KOG0593 Predicted protein kina 97.9 1.6E-05 3.4E-10 63.3 5.1 38 179-219 100-137 (396)
69 cd05108 PTKc_EGFR Catalytic do 97.9 1.2E-05 2.6E-10 65.4 4.7 40 177-219 106-145 (316)
70 cd05593 STKc_PKB_gamma Catalyt 97.9 1.5E-05 3.1E-10 65.4 5.1 40 177-219 92-131 (328)
71 PHA03211 serine/threonine kina 97.9 1.1E-05 2.3E-10 69.4 4.4 41 176-219 256-296 (461)
72 cd05054 PTKc_VEGFR Catalytic d 97.9 1.4E-05 3E-10 65.9 4.9 39 178-219 171-209 (337)
73 PHA03209 serine/threonine kina 97.9 1.3E-05 2.9E-10 66.5 4.8 41 176-219 153-193 (357)
74 cd05111 PTK_HER3 Pseudokinase 97.9 2E-05 4.3E-10 62.9 5.7 41 176-219 105-145 (279)
75 KOG0595 Serine/threonine-prote 97.9 1.9E-05 4.1E-10 64.9 5.3 41 176-219 105-145 (429)
76 cd05631 STKc_GRK4 Catalytic do 97.9 1.2E-05 2.7E-10 64.4 4.3 40 177-219 99-138 (285)
77 cd05037 PTK_Jak_rpt1 Pseudokin 97.9 1.6E-05 3.4E-10 62.4 4.8 40 177-219 98-137 (259)
78 cd07859 STKc_TDY_MAPK_plant Ca 97.9 1.1E-05 2.4E-10 66.1 4.0 41 176-219 99-139 (338)
79 cd05595 STKc_PKB_beta Catalyti 97.9 1.8E-05 3.8E-10 64.8 5.2 41 176-219 91-131 (323)
80 cd05571 STKc_PKB Catalytic dom 97.9 1.8E-05 3.9E-10 64.7 5.2 40 177-219 92-131 (323)
81 KOG0531 Protein phosphatase 1, 97.9 3.9E-06 8.5E-11 71.1 1.3 103 4-121 70-172 (414)
82 PTZ00284 protein kinase; Provi 97.9 1.6E-05 3.4E-10 68.4 5.0 41 177-219 228-268 (467)
83 KOG0610 Putative serine/threon 97.9 1.2E-05 2.7E-10 66.1 3.8 36 182-220 181-216 (459)
84 KOG0986 G protein-coupled rece 97.9 1.4E-05 3.1E-10 66.6 4.1 39 179-220 286-324 (591)
85 cd05075 PTKc_Axl Catalytic dom 97.9 1.6E-05 3.5E-10 63.0 4.4 39 178-219 110-148 (272)
86 cd05586 STKc_Sck1_like Catalyt 97.9 2.1E-05 4.5E-10 64.5 5.2 41 176-219 92-132 (330)
87 cd05591 STKc_nPKC_epsilon Cata 97.9 1.9E-05 4.2E-10 64.4 5.0 41 176-219 92-132 (321)
88 KOG0599 Phosphorylase kinase g 97.9 1.1E-05 2.3E-10 63.4 3.2 39 179-220 122-160 (411)
89 cd05616 STKc_cPKC_beta Catalyt 97.9 2.1E-05 4.6E-10 64.2 5.2 40 177-219 98-137 (323)
90 cd05042 PTKc_Aatyk Catalytic d 97.9 1.6E-05 3.4E-10 63.0 4.3 38 179-219 99-136 (269)
91 cd05587 STKc_cPKC Catalytic do 97.9 1.5E-05 3.2E-10 65.2 4.2 40 177-219 98-137 (324)
92 cd05628 STKc_NDR1 Catalytic do 97.9 2.2E-05 4.7E-10 65.3 5.1 40 177-219 98-137 (363)
93 cd05585 STKc_YPK1_like Catalyt 97.9 2.2E-05 4.8E-10 63.8 5.1 41 176-219 89-129 (312)
94 cd05064 PTKc_EphR_A10 Catalyti 97.9 2.1E-05 4.5E-10 62.3 4.7 40 177-219 104-143 (266)
95 cd05078 PTK_Jak2_Jak3_rpt1 Pse 97.9 2.7E-05 5.7E-10 61.4 5.3 40 177-219 97-136 (258)
96 cd05106 PTKc_CSF-1R Catalytic 97.9 2.1E-05 4.5E-10 65.8 4.9 39 178-219 210-248 (374)
97 KOG0582 Ste20-like serine/thre 97.9 1.8E-05 4E-10 65.7 4.4 38 180-220 126-163 (516)
98 cd05620 STKc_nPKC_delta Cataly 97.8 2.6E-05 5.6E-10 63.6 5.1 40 177-219 93-132 (316)
99 cd08227 PK_STRAD_alpha Pseudok 97.8 2.3E-05 5E-10 64.1 4.8 39 178-219 99-137 (327)
100 cd07871 STKc_PCTAIRE3 Catalyti 97.8 1.5E-05 3.3E-10 63.9 3.7 39 178-219 101-139 (288)
101 cd05109 PTKc_HER2 Catalytic do 97.8 2.6E-05 5.6E-10 62.1 4.9 40 177-219 106-145 (279)
102 cd05604 STKc_SGK3 Catalytic do 97.8 2.7E-05 5.9E-10 63.7 5.1 40 177-219 93-132 (325)
103 cd05615 STKc_cPKC_alpha Cataly 97.8 1.8E-05 4E-10 64.7 4.1 41 176-219 97-137 (323)
104 cd05094 PTKc_TrkC Catalytic do 97.8 2.8E-05 6E-10 62.4 5.0 39 178-219 121-159 (291)
105 cd05575 STKc_SGK Catalytic dom 97.8 2.9E-05 6.3E-10 63.4 5.2 40 177-219 93-132 (323)
106 cd05614 STKc_MSK2_N N-terminal 97.8 2.6E-05 5.7E-10 63.9 4.9 40 177-219 102-141 (332)
107 cd05617 STKc_aPKC_zeta Catalyt 97.8 2.6E-05 5.7E-10 63.8 4.9 41 176-219 92-132 (327)
108 cd05101 PTKc_FGFR2 Catalytic d 97.8 2.8E-05 6.1E-10 62.8 5.0 39 178-219 135-173 (304)
109 PHA03207 serine/threonine kina 97.8 2.3E-05 5E-10 65.9 4.6 42 175-219 180-221 (392)
110 cd05089 PTKc_Tie1 Catalytic do 97.8 2.7E-05 5.9E-10 62.7 4.7 39 178-219 117-155 (297)
111 PTZ00036 glycogen synthase kin 97.8 2.3E-05 5.1E-10 67.0 4.4 40 177-219 167-206 (440)
112 KOG0198 MEKK and related serin 97.8 3E-05 6.5E-10 62.8 4.8 37 179-218 116-152 (313)
113 cd05104 PTKc_Kit Catalytic dom 97.8 2.8E-05 6E-10 65.0 4.7 40 177-219 211-250 (375)
114 PLN00181 protein SPA1-RELATED; 97.8 2.5E-05 5.5E-10 71.6 4.8 39 177-218 77-115 (793)
115 cd05618 STKc_aPKC_iota Catalyt 97.8 3.4E-05 7.4E-10 63.3 5.1 41 176-219 92-132 (329)
116 cd05603 STKc_SGK2 Catalytic do 97.8 3.6E-05 7.7E-10 62.8 5.2 38 179-219 95-132 (321)
117 cd07878 STKc_p38beta_MAPK11 Ca 97.8 3.1E-05 6.7E-10 63.7 4.7 40 177-219 115-154 (343)
118 cd05590 STKc_nPKC_eta Catalyti 97.8 3.8E-05 8.1E-10 62.7 5.2 40 177-219 93-132 (320)
119 cd05080 PTKc_Tyk2_rpt2 Catalyt 97.8 3.3E-05 7.2E-10 61.7 4.7 40 177-219 104-143 (283)
120 cd05052 PTKc_Abl Catalytic dom 97.8 4E-05 8.6E-10 60.5 5.2 40 177-219 101-140 (263)
121 cd05062 PTKc_IGF-1R Catalytic 97.8 2.8E-05 6.1E-10 61.9 4.3 39 178-219 117-155 (277)
122 cd05612 STKc_PRKX_like Catalyt 97.8 3.9E-05 8.4E-10 61.7 5.2 40 177-219 98-137 (291)
123 cd05621 STKc_ROCK2 Catalytic d 97.8 2.6E-05 5.7E-10 65.1 4.2 38 179-219 141-178 (370)
124 cd05103 PTKc_VEGFR2 Catalytic 97.8 3.7E-05 8.1E-10 63.4 5.1 39 178-219 177-215 (343)
125 cd05619 STKc_nPKC_theta Cataly 97.8 4.1E-05 8.8E-10 62.5 5.1 41 176-219 92-132 (316)
126 KOG0583 Serine/threonine prote 97.8 2.7E-05 5.9E-10 64.9 4.1 37 180-219 120-156 (370)
127 cd05093 PTKc_TrkB Catalytic do 97.8 4E-05 8.7E-10 61.4 5.0 39 178-219 118-156 (288)
128 cd07874 STKc_JNK3 Catalytic do 97.8 2.4E-05 5.3E-10 64.7 3.8 39 178-219 117-155 (355)
129 cd05047 PTKc_Tie Catalytic dom 97.8 4.4E-05 9.4E-10 60.6 5.1 39 178-219 110-148 (270)
130 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 97.8 3.5E-05 7.7E-10 61.5 4.6 40 177-219 105-144 (284)
131 cd05046 PTK_CCK4 Pseudokinase 97.8 3.3E-05 7.2E-10 61.3 4.4 40 177-219 114-153 (275)
132 cd05592 STKc_nPKC_theta_delta 97.8 4.4E-05 9.6E-10 62.2 5.2 40 177-219 93-132 (316)
133 cd05082 PTKc_Csk Catalytic dom 97.8 4E-05 8.6E-10 60.2 4.7 40 177-219 99-138 (256)
134 cd05035 PTKc_Axl_like Catalyti 97.8 4.1E-05 8.9E-10 60.5 4.8 40 177-219 110-149 (273)
135 cd05588 STKc_aPKC Catalytic do 97.7 4.6E-05 1E-09 62.5 5.2 42 175-219 91-132 (329)
136 PF00069 Pkinase: Protein kina 97.7 4.5E-05 9.7E-10 59.8 4.8 41 176-219 94-134 (260)
137 KOG0983 Mitogen-activated prot 97.7 3.3E-05 7.2E-10 60.7 3.9 35 184-220 195-229 (391)
138 cd07869 STKc_PFTAIRE1 Catalyti 97.7 3.3E-05 7.1E-10 62.4 4.1 39 178-219 101-139 (303)
139 KOG0615 Serine/threonine prote 97.7 2.5E-05 5.5E-10 64.3 3.4 34 183-219 279-312 (475)
140 cd05090 PTKc_Ror1 Catalytic do 97.7 3.7E-05 8.1E-10 61.3 4.4 38 179-219 123-160 (283)
141 PTZ00426 cAMP-dependent protei 97.7 4.6E-05 1E-09 62.9 5.1 41 176-219 127-167 (340)
142 KOG1644 U2-associated snRNP A' 97.7 4.6E-05 1E-09 57.2 4.4 80 30-121 42-123 (233)
143 cd05079 PTKc_Jak1_rpt2 Catalyt 97.7 4.3E-05 9.3E-10 61.1 4.7 40 177-219 106-145 (284)
144 cd05100 PTKc_FGFR3 Catalytic d 97.7 4.6E-05 1E-09 62.5 5.0 39 178-219 132-170 (334)
145 KOG2345 Serine/threonine prote 97.7 4.6E-05 1E-09 59.0 4.5 40 179-219 126-165 (302)
146 cd05074 PTKc_Tyro3 Catalytic d 97.7 4.8E-05 1E-09 60.3 4.9 39 178-219 111-149 (273)
147 cd05589 STKc_PKN Catalytic dom 97.7 3.6E-05 7.7E-10 62.9 4.2 41 176-219 97-137 (324)
148 cd05608 STKc_GRK1 Catalytic do 97.7 3E-05 6.4E-10 62.0 3.7 40 177-219 94-133 (280)
149 cd05599 STKc_NDR_like Catalyti 97.7 3.5E-05 7.5E-10 64.0 4.2 39 178-219 99-137 (364)
150 KOG0600 Cdc2-related protein k 97.7 4.3E-05 9.3E-10 64.5 4.6 39 179-220 217-255 (560)
151 cd05097 PTKc_DDR_like Catalyti 97.7 4.5E-05 9.7E-10 61.3 4.7 39 178-219 127-165 (295)
152 PTZ00263 protein kinase A cata 97.7 5.1E-05 1.1E-09 62.2 5.1 39 178-219 116-154 (329)
153 cd05045 PTKc_RET Catalytic dom 97.7 3.7E-05 8.1E-10 61.6 4.2 39 178-219 125-163 (290)
154 cd05098 PTKc_FGFR1 Catalytic d 97.7 3.5E-05 7.5E-10 62.4 4.0 39 178-219 138-176 (307)
155 cd05091 PTKc_Ror2 Catalytic do 97.7 3.7E-05 8.1E-10 61.3 4.2 39 178-219 122-160 (283)
156 cd05036 PTKc_ALK_LTK Catalytic 97.7 4.8E-05 1E-09 60.5 4.8 38 178-218 114-151 (277)
157 cd05113 PTKc_Btk_Bmx Catalytic 97.7 5.5E-05 1.2E-09 59.6 5.0 41 176-219 96-136 (256)
158 cd05115 PTKc_Zap-70 Catalytic 97.7 5.1E-05 1.1E-09 59.8 4.8 41 176-219 91-131 (257)
159 cd07853 STKc_NLK Catalytic dom 97.7 4.2E-05 9.2E-10 63.8 4.4 41 176-219 99-139 (372)
160 cd05633 STKc_GRK3 Catalytic do 97.7 3.1E-05 6.8E-10 61.9 3.5 40 177-219 94-133 (279)
161 cd05069 PTKc_Yes Catalytic dom 97.7 6.1E-05 1.3E-09 59.3 5.1 40 177-219 99-138 (260)
162 cd05573 STKc_ROCK_NDR_like Cat 97.7 3.8E-05 8.2E-10 63.3 4.1 40 177-219 98-137 (350)
163 cd07863 STKc_CDK4 Catalytic do 97.7 4.1E-05 8.9E-10 61.2 4.2 39 178-219 106-144 (288)
164 cd05602 STKc_SGK1 Catalytic do 97.7 5.9E-05 1.3E-09 61.6 5.2 38 179-219 95-132 (325)
165 cd05033 PTKc_EphR Catalytic do 97.7 4.9E-05 1.1E-09 60.0 4.6 40 177-219 103-142 (266)
166 cd05582 STKc_RSK_N N-terminal 97.7 4E-05 8.8E-10 62.4 4.2 40 177-219 95-134 (318)
167 cd07872 STKc_PCTAIRE2 Catalyti 97.7 3.9E-05 8.5E-10 62.2 4.0 39 178-219 102-140 (309)
168 cd05053 PTKc_FGFR Catalytic do 97.7 4.5E-05 9.8E-10 61.1 4.3 40 177-219 129-168 (293)
169 cd05088 PTKc_Tie2 Catalytic do 97.7 4.2E-05 9.2E-10 61.9 4.2 39 178-219 122-160 (303)
170 PLN00034 mitogen-activated pro 97.7 4.1E-05 9E-10 63.3 4.2 38 179-219 167-204 (353)
171 KOG1035 eIF-2alpha kinase GCN2 97.7 4.8E-05 1E-09 70.2 4.9 37 180-219 697-733 (1351)
172 cd05095 PTKc_DDR2 Catalytic do 97.7 5.5E-05 1.2E-09 60.9 4.8 38 179-219 129-166 (296)
173 cd05032 PTKc_InsR_like Catalyt 97.7 4.9E-05 1.1E-09 60.3 4.5 39 178-219 117-155 (277)
174 cd05057 PTKc_EGFR_like Catalyt 97.7 6.4E-05 1.4E-09 59.9 5.1 40 177-219 106-145 (279)
175 KOG0661 MAPK related serine/th 97.7 5.8E-05 1.3E-09 63.3 4.9 42 173-217 103-144 (538)
176 cd05607 STKc_GRK7 Catalytic do 97.7 5.8E-05 1.3E-09 60.2 4.9 40 177-219 92-131 (277)
177 cd05058 PTKc_Met_Ron Catalytic 97.7 4.9E-05 1.1E-09 59.8 4.4 39 178-219 96-134 (262)
178 cd05601 STKc_CRIK Catalytic do 97.7 5E-05 1.1E-09 62.1 4.6 40 177-219 99-138 (330)
179 cd05629 STKc_NDR_like_fungal C 97.7 4.2E-05 9.2E-10 63.9 4.2 38 179-219 100-137 (377)
180 cd07875 STKc_JNK1 Catalytic do 97.7 3.9E-05 8.4E-10 63.8 4.0 39 178-219 124-162 (364)
181 cd05099 PTKc_FGFR4 Catalytic d 97.7 5.8E-05 1.2E-09 61.4 4.9 39 178-219 132-170 (314)
182 cd05110 PTKc_HER4 Catalytic do 97.7 5.4E-05 1.2E-09 61.2 4.6 40 177-219 106-145 (303)
183 PHA03210 serine/threonine kina 97.7 3.9E-05 8.5E-10 66.7 4.0 36 181-219 268-303 (501)
184 PLN03225 Serine/threonine-prot 97.7 3.9E-05 8.5E-10 67.6 4.1 34 182-218 257-290 (566)
185 cd05147 RIO1_euk RIO kinase fa 97.7 4.2E-05 9E-10 57.9 3.7 37 179-218 116-153 (190)
186 KOG0659 Cdk activating kinase 97.7 4.9E-05 1.1E-09 59.4 4.0 39 179-220 100-138 (318)
187 cd05086 PTKc_Aatyk2 Catalytic 97.7 6.8E-05 1.5E-09 59.4 5.0 38 179-219 98-135 (268)
188 cd05072 PTKc_Lyn Catalytic dom 97.7 5.7E-05 1.2E-09 59.5 4.5 40 177-219 100-139 (261)
189 cd05596 STKc_ROCK Catalytic do 97.7 4.3E-05 9.3E-10 63.8 4.0 38 179-219 141-178 (370)
190 cd07876 STKc_JNK2 Catalytic do 97.7 3.8E-05 8.1E-10 63.7 3.6 38 179-219 122-159 (359)
191 cd05627 STKc_NDR2 Catalytic do 97.7 6.6E-05 1.4E-09 62.3 5.1 39 178-219 99-137 (360)
192 cd05068 PTKc_Frk_like Catalyti 97.7 7.4E-05 1.6E-09 58.8 5.1 40 177-219 100-139 (261)
193 cd05570 STKc_PKC Catalytic dom 97.7 6.9E-05 1.5E-09 61.1 5.0 41 176-219 92-132 (318)
194 cd07868 STKc_CDK8 Catalytic do 97.7 4.6E-05 1E-09 61.9 3.9 36 179-217 107-142 (317)
195 cd05626 STKc_LATS2 Catalytic d 97.7 7.6E-05 1.6E-09 62.5 5.2 38 179-219 100-137 (381)
196 cd05623 STKc_MRCK_alpha Cataly 97.7 5.7E-05 1.2E-09 62.0 4.4 39 178-219 100-138 (332)
197 cd05114 PTKc_Tec_Rlk Catalytic 97.7 6.5E-05 1.4E-09 59.0 4.6 40 177-219 97-136 (256)
198 PF07714 Pkinase_Tyr: Protein 97.7 7E-05 1.5E-09 59.2 4.7 42 175-219 98-139 (259)
199 cd05576 STKc_RPK118_like Catal 97.7 5.6E-05 1.2E-09 58.9 4.1 40 177-219 82-121 (237)
200 cd05084 PTKc_Fes Catalytic dom 97.6 6.1E-05 1.3E-09 58.9 4.3 40 177-219 91-130 (252)
201 cd05584 STKc_p70S6K Catalytic 97.6 5.3E-05 1.2E-09 61.9 4.1 38 179-219 99-136 (323)
202 KOG0575 Polo-like serine/threo 97.6 7.7E-05 1.7E-09 64.1 5.1 39 179-220 117-155 (592)
203 cd05051 PTKc_DDR Catalytic dom 97.6 6.3E-05 1.4E-09 60.4 4.3 40 177-219 127-166 (296)
204 cd08226 PK_STRAD_beta Pseudoki 97.6 5.4E-05 1.2E-09 61.9 4.0 39 178-219 99-137 (328)
205 cd05059 PTKc_Tec_like Catalyti 97.6 6.3E-05 1.4E-09 59.1 4.2 41 176-219 96-136 (256)
206 cd05060 PTKc_Syk_like Catalyti 97.6 8.2E-05 1.8E-09 58.5 4.8 41 176-219 91-131 (257)
207 cd05039 PTKc_Csk_like Catalyti 97.6 6.7E-05 1.5E-09 58.9 4.3 40 177-219 99-138 (256)
208 cd05048 PTKc_Ror Catalytic Dom 97.6 8.4E-05 1.8E-09 59.2 4.9 38 179-219 123-160 (283)
209 cd05116 PTKc_Syk Catalytic dom 97.6 8.5E-05 1.8E-09 58.4 4.8 40 177-219 92-131 (257)
210 cd05598 STKc_LATS Catalytic do 97.6 6.4E-05 1.4E-09 62.8 4.3 38 179-219 100-137 (376)
211 cd05070 PTKc_Fyn_Yrk Catalytic 97.6 7.6E-05 1.7E-09 58.7 4.5 40 177-219 99-138 (260)
212 cd05632 STKc_GRK5 Catalytic do 97.6 6.8E-05 1.5E-09 60.1 4.2 40 177-219 99-138 (285)
213 cd05065 PTKc_EphR_B Catalytic 97.6 0.00012 2.7E-09 57.9 5.6 40 177-219 103-142 (269)
214 cd05625 STKc_LATS1 Catalytic d 97.6 6.1E-05 1.3E-09 63.0 4.0 38 179-219 100-137 (382)
215 PTZ00267 NIMA-related protein 97.6 7.6E-05 1.6E-09 64.5 4.7 38 179-219 168-205 (478)
216 cd05624 STKc_MRCK_beta Catalyt 97.6 7.4E-05 1.6E-09 61.3 4.4 39 178-219 100-138 (331)
217 cd07867 STKc_CDC2L6 Catalytic 97.6 6.2E-05 1.3E-09 61.0 3.9 36 179-217 107-142 (317)
218 cd05083 PTKc_Chk Catalytic dom 97.6 0.0001 2.2E-09 57.8 4.9 40 177-219 97-136 (254)
219 cd05043 PTK_Ryk Pseudokinase d 97.6 9.1E-05 2E-09 59.0 4.7 39 178-219 115-153 (280)
220 cd05622 STKc_ROCK1 Catalytic d 97.6 8E-05 1.7E-09 62.2 4.5 38 179-219 141-178 (371)
221 cd05061 PTKc_InsR Catalytic do 97.6 7.8E-05 1.7E-09 59.7 4.3 38 179-219 118-155 (288)
222 cd05606 STKc_beta_ARK Catalyti 97.6 7.5E-05 1.6E-09 59.6 4.1 40 177-219 94-133 (278)
223 cd00192 PTKc Catalytic domain 97.6 8.6E-05 1.9E-09 58.1 4.4 41 176-219 101-141 (262)
224 cd05087 PTKc_Aatyk1_Aatyk3 Cat 97.6 0.0001 2.2E-09 58.3 4.9 38 179-219 99-136 (269)
225 KOG3207 Beta-tubulin folding c 97.6 3.4E-05 7.4E-10 64.0 2.1 41 61-101 268-314 (505)
226 cd07841 STKc_CDK7 Catalytic do 97.6 0.0001 2.2E-09 59.3 4.9 41 176-219 98-138 (298)
227 cd05597 STKc_DMPK_like Catalyt 97.6 8E-05 1.7E-09 61.1 4.3 39 178-219 100-138 (331)
228 cd05071 PTKc_Src Catalytic dom 97.6 9.4E-05 2E-09 58.4 4.6 39 178-219 100-138 (262)
229 cd07848 STKc_CDKL5 Catalytic d 97.6 7.6E-05 1.6E-09 59.6 4.1 40 177-219 97-136 (287)
230 cd05092 PTKc_TrkA Catalytic do 97.6 8.9E-05 1.9E-09 59.2 4.4 39 178-219 120-158 (280)
231 cd05055 PTKc_PDGFR Catalytic d 97.6 8.6E-05 1.9E-09 60.1 4.4 40 177-219 138-177 (302)
232 cd05063 PTKc_EphR_A2 Catalytic 97.6 0.0001 2.3E-09 58.2 4.7 40 177-219 104-143 (268)
233 cd07843 STKc_CDC2L1 Catalytic 97.6 8.3E-05 1.8E-09 59.7 4.1 40 177-219 103-142 (293)
234 KOG0588 Serine/threonine prote 97.6 7.7E-05 1.7E-09 65.0 4.0 45 172-219 104-148 (786)
235 cd05066 PTKc_EphR_A Catalytic 97.6 0.00011 2.4E-09 58.1 4.8 40 177-219 103-142 (267)
236 cd05050 PTKc_Musk Catalytic do 97.6 9.2E-05 2E-09 59.2 4.3 39 178-219 128-166 (288)
237 cd05040 PTKc_Ack_like Catalyti 97.6 0.0001 2.2E-09 57.9 4.4 40 177-219 94-133 (257)
238 cd06643 STKc_SLK Catalytic dom 97.6 0.00013 2.9E-09 58.1 5.2 40 177-219 100-139 (282)
239 KOG1644 U2-associated snRNP A' 97.6 0.00015 3.3E-09 54.5 5.0 102 7-121 43-150 (233)
240 cd05044 PTKc_c-ros Catalytic d 97.6 9.9E-05 2.2E-09 58.3 4.4 39 178-219 104-142 (269)
241 cd05105 PTKc_PDGFR_alpha Catal 97.6 9.3E-05 2E-09 62.5 4.4 40 177-219 234-273 (400)
242 cd05148 PTKc_Srm_Brk Catalytic 97.6 0.00013 2.7E-09 57.4 4.9 40 177-219 101-140 (261)
243 cd05605 STKc_GRK4_like Catalyt 97.6 9.2E-05 2E-09 59.3 4.1 40 177-219 99-138 (285)
244 cd05600 STKc_Sid2p_Dbf2p Catal 97.5 7.3E-05 1.6E-09 61.3 3.6 39 178-219 99-137 (333)
245 cd08223 STKc_Nek4 Catalytic do 97.5 0.00013 2.7E-09 57.3 4.8 40 177-219 99-138 (257)
246 cd05038 PTKc_Jak_rpt2 Catalyti 97.5 0.00011 2.3E-09 58.5 4.4 40 177-219 106-145 (284)
247 cd05067 PTKc_Lck_Blk Catalytic 97.5 0.0001 2.2E-09 58.0 4.2 40 177-219 99-138 (260)
248 cd05145 RIO1_like RIO kinase f 97.5 0.0001 2.2E-09 55.6 4.0 36 179-217 116-152 (190)
249 PTZ00283 serine/threonine prot 97.5 8.8E-05 1.9E-09 64.4 4.1 38 179-219 142-179 (496)
250 PRK13184 pknD serine/threonine 97.5 9.7E-05 2.1E-09 67.9 4.5 39 178-219 111-149 (932)
251 cd06658 STKc_PAK5 Catalytic do 97.5 0.0001 2.2E-09 59.4 4.1 40 177-219 115-154 (292)
252 cd05056 PTKc_FAK Catalytic dom 97.5 0.00013 2.9E-09 57.7 4.7 40 177-219 104-143 (270)
253 cd07847 STKc_CDKL1_4 Catalytic 97.5 0.00013 2.7E-09 58.2 4.6 41 176-219 96-136 (286)
254 cd07861 STKc_CDK1_euk Catalyti 97.5 0.00011 2.3E-09 58.6 4.2 40 177-219 98-137 (285)
255 cd05630 STKc_GRK6 Catalytic do 97.5 0.00011 2.5E-09 58.8 4.3 39 178-219 100-138 (285)
256 cd05085 PTKc_Fer Catalytic dom 97.5 0.00015 3.2E-09 56.7 4.8 40 177-219 90-129 (250)
257 cd07839 STKc_CDK5 Catalytic do 97.5 0.00011 2.4E-09 58.5 4.2 40 177-219 96-135 (284)
258 cd07857 STKc_MPK1 Catalytic do 97.5 8.6E-05 1.9E-09 60.9 3.6 40 177-219 102-141 (332)
259 cd08229 STKc_Nek7 Catalytic do 97.5 0.00012 2.5E-09 57.8 4.3 40 177-219 103-142 (267)
260 cd05610 STKc_MASTL Catalytic d 97.5 0.0001 2.2E-09 66.4 4.3 39 178-219 102-140 (669)
261 cd06617 PKc_MKK3_6 Catalytic d 97.5 0.00011 2.4E-09 58.5 4.1 41 177-219 100-140 (283)
262 cd07877 STKc_p38alpha_MAPK14 C 97.5 0.00013 2.9E-09 60.2 4.6 41 176-219 116-156 (345)
263 cd07873 STKc_PCTAIRE1 Catalyti 97.5 0.00011 2.3E-09 59.3 4.0 40 177-219 101-140 (301)
264 cd08529 STKc_FA2-like Catalyti 97.5 0.00014 3E-09 56.9 4.6 40 177-219 98-137 (256)
265 cd08216 PK_STRAD Pseudokinase 97.5 0.00015 3.4E-09 58.7 4.9 38 179-219 100-137 (314)
266 KOG1909 Ran GTPase-activating 97.5 1.9E-05 4E-10 63.8 -0.5 118 3-121 89-251 (382)
267 cd07852 STKc_MAPK15 Catalytic 97.5 0.00012 2.6E-09 60.1 4.3 42 176-220 103-144 (337)
268 cd07837 STKc_CdkB_plant Cataly 97.5 0.00014 3E-09 58.3 4.5 38 178-218 108-145 (295)
269 KOG0660 Mitogen-activated prot 97.5 5.4E-05 1.2E-09 61.3 2.0 37 180-219 125-161 (359)
270 smart00219 TyrKc Tyrosine kina 97.5 0.00016 3.5E-09 56.5 4.8 40 177-219 100-139 (258)
271 cd05107 PTKc_PDGFR_beta Cataly 97.5 0.00013 2.8E-09 61.7 4.3 39 178-219 237-275 (401)
272 cd06637 STKc_TNIK Catalytic do 97.5 0.00011 2.4E-09 58.1 3.7 40 177-219 108-147 (272)
273 cd07870 STKc_PFTAIRE2 Catalyti 97.5 0.00012 2.6E-09 58.7 3.9 39 178-219 101-139 (291)
274 cd05073 PTKc_Hck Catalytic dom 97.5 0.00016 3.4E-09 57.0 4.5 40 177-219 99-138 (260)
275 cd08228 STKc_Nek6 Catalytic do 97.5 0.00014 3.1E-09 57.3 4.2 39 178-219 104-142 (267)
276 PLN03224 probable serine/threo 97.5 0.00015 3.3E-09 62.8 4.6 39 178-219 307-345 (507)
277 cd06654 STKc_PAK1 Catalytic do 97.5 0.00012 2.6E-09 59.0 3.7 40 177-219 113-152 (296)
278 cd05041 PTKc_Fes_like Catalyti 97.4 0.00018 3.8E-09 56.3 4.5 39 178-219 91-129 (251)
279 cd05579 STKc_MAST_like Catalyt 97.4 0.00015 3.1E-09 56.9 4.0 40 177-219 90-129 (265)
280 KOG0663 Protein kinase PITSLRE 97.4 0.00018 4E-09 58.0 4.4 38 179-219 176-213 (419)
281 cd07846 STKc_CDKL2_3 Catalytic 97.4 0.00015 3.2E-09 57.8 4.0 40 177-219 97-136 (286)
282 cd07860 STKc_CDK2_3 Catalytic 97.4 0.00016 3.4E-09 57.7 4.1 40 177-219 97-136 (284)
283 PHA02988 hypothetical protein; 97.4 0.00014 3.1E-09 58.3 3.8 42 176-220 118-160 (283)
284 cd06639 STKc_myosinIIIB Cataly 97.4 0.00016 3.6E-09 57.9 4.2 41 176-219 124-164 (291)
285 KOG0603 Ribosomal protein S6 k 97.4 0.00026 5.6E-09 61.3 5.3 35 180-217 415-449 (612)
286 cd06624 STKc_ASK Catalytic dom 97.4 0.0002 4.3E-09 56.6 4.4 38 178-218 106-143 (268)
287 KOG0591 NIMA (never in mitosis 97.4 0.00047 1E-08 54.5 6.3 41 179-220 123-165 (375)
288 PHA03390 pk1 serine/threonine- 97.4 0.0002 4.4E-09 56.8 4.4 41 176-219 105-145 (267)
289 cd05049 PTKc_Trk Catalytic dom 97.4 0.00024 5.2E-09 56.4 4.9 39 178-219 120-158 (280)
290 cd07855 STKc_ERK5 Catalytic do 97.4 0.00016 3.5E-09 59.3 3.9 40 177-219 104-143 (334)
291 KOG0666 Cyclin C-dependent kin 97.4 0.00015 3.2E-09 58.1 3.4 36 181-219 133-168 (438)
292 cd07849 STKc_ERK1_2_like Catal 97.4 0.00016 3.5E-09 59.3 3.9 40 177-219 103-142 (336)
293 cd07850 STKc_JNK Catalytic dom 97.4 0.00018 3.9E-09 59.5 4.2 39 178-219 116-154 (353)
294 KOG0578 p21-activated serine/t 97.4 0.00023 4.9E-09 60.8 4.7 39 179-220 368-406 (550)
295 cd07838 STKc_CDK4_6_like Catal 97.4 0.00024 5.1E-09 56.6 4.7 40 177-219 104-143 (287)
296 cd07880 STKc_p38gamma_MAPK12 C 97.4 0.00017 3.8E-09 59.4 4.1 41 176-219 114-154 (343)
297 cd07836 STKc_Pho85 Catalytic d 97.4 0.00019 4.2E-09 57.1 4.2 40 177-219 97-136 (284)
298 KOG0667 Dual-specificity tyros 97.4 0.00016 3.4E-09 62.6 3.8 37 179-218 288-324 (586)
299 cd06651 STKc_MEKK3 Catalytic d 97.4 0.0002 4.3E-09 56.6 4.2 40 177-219 103-142 (266)
300 cd05034 PTKc_Src_like Catalyti 97.4 0.00023 4.9E-09 56.0 4.5 40 177-219 100-139 (261)
301 cd07864 STKc_CDK12 Catalytic d 97.4 0.00019 4.2E-09 57.7 4.1 41 176-219 112-152 (302)
302 cd08225 STKc_Nek5 Catalytic do 97.4 0.00017 3.7E-09 56.4 3.6 39 178-219 99-137 (257)
303 cd06644 STKc_STK10_LOK Catalyt 97.4 0.00028 6.1E-09 56.6 5.0 40 177-219 107-146 (292)
304 cd07866 STKc_BUR1 Catalytic do 97.4 0.0002 4.2E-09 57.8 4.0 41 176-219 111-151 (311)
305 cd06659 STKc_PAK6 Catalytic do 97.4 0.00021 4.5E-09 57.7 4.2 40 177-219 114-153 (297)
306 cd05574 STKc_phototropin_like 97.4 0.00023 5E-09 57.8 4.4 39 178-219 101-139 (316)
307 cd08224 STKc_Nek6_Nek7 Catalyt 97.4 0.00025 5.5E-09 55.8 4.5 39 178-219 104-142 (267)
308 cd07831 STKc_MOK Catalytic dom 97.4 0.00019 4.2E-09 57.0 3.9 40 176-218 96-135 (282)
309 cd06619 PKc_MKK5 Catalytic dom 97.4 0.00023 4.9E-09 56.8 4.3 38 179-219 94-131 (279)
310 cd07845 STKc_CDK10 Catalytic d 97.4 0.0002 4.3E-09 58.0 4.0 41 176-219 104-144 (309)
311 PF00560 LRR_1: Leucine Rich R 97.4 6.5E-05 1.4E-09 35.7 0.7 21 7-28 1-21 (22)
312 KOG2739 Leucine-rich acidic nu 97.4 9.2E-05 2E-09 57.6 1.9 84 5-102 42-130 (260)
313 cd08217 STKc_Nek2 Catalytic do 97.4 0.00022 4.7E-09 55.9 4.1 44 176-219 101-146 (265)
314 cd07865 STKc_CDK9 Catalytic do 97.4 0.00021 4.5E-09 57.6 4.1 40 177-219 116-155 (310)
315 cd06625 STKc_MEKK3_like Cataly 97.4 0.00022 4.9E-09 56.0 4.2 38 179-219 103-140 (263)
316 cd06652 STKc_MEKK2 Catalytic d 97.4 0.00022 4.7E-09 56.3 4.1 39 178-219 104-142 (265)
317 KOG1006 Mitogen-activated prot 97.4 4.3E-05 9.2E-10 59.8 -0.0 35 184-220 171-205 (361)
318 KOG0580 Serine/threonine prote 97.4 0.00013 2.7E-09 56.3 2.5 38 179-219 123-160 (281)
319 cd06607 STKc_TAO Catalytic dom 97.4 0.00032 6.9E-09 56.8 5.1 41 176-219 111-151 (307)
320 cd06628 STKc_MAPKKK_Byr2_like 97.3 0.00019 4.2E-09 56.5 3.7 39 178-219 104-142 (267)
321 cd06618 PKc_MKK7 Catalytic dom 97.3 0.00024 5.1E-09 57.2 4.2 41 177-219 111-151 (296)
322 cd07835 STKc_CDK1_like Catalyt 97.3 0.00022 4.8E-09 56.8 4.0 40 177-219 96-135 (283)
323 cd07832 STKc_CCRK Catalytic do 97.3 0.00023 4.9E-09 56.7 4.0 40 177-219 96-135 (286)
324 cd05118 STKc_CMGC Catalytic do 97.3 0.00026 5.6E-09 56.3 4.3 40 177-219 95-134 (283)
325 cd06648 STKc_PAK_II Catalytic 97.3 0.00029 6.3E-09 56.4 4.6 40 177-219 112-151 (285)
326 KOG0614 cGMP-dependent protein 97.3 0.00023 5E-09 60.5 4.0 36 182-220 522-557 (732)
327 PRK09188 serine/threonine prot 97.3 0.00025 5.3E-09 59.0 4.1 34 183-219 114-148 (365)
328 cd05609 STKc_MAST Catalytic do 97.3 0.00025 5.4E-09 57.3 4.1 39 178-219 99-137 (305)
329 cd06635 STKc_TAO1 Catalytic do 97.3 0.00032 6.9E-09 57.1 4.8 41 176-219 121-161 (317)
330 cd06656 STKc_PAK3 Catalytic do 97.3 0.00022 4.7E-09 57.5 3.7 40 177-219 112-151 (297)
331 cd07840 STKc_CDK9_like Catalyt 97.3 0.00024 5.1E-09 56.5 3.9 41 176-219 96-136 (287)
332 cd06649 PKc_MEK2 Catalytic dom 97.3 0.00033 7.2E-09 57.4 4.8 40 178-219 101-140 (331)
333 cd06653 STKc_MEKK3_like_1 Cata 97.3 0.00025 5.4E-09 56.0 3.9 39 178-219 104-142 (264)
334 cd05613 STKc_MSK1_N N-terminal 97.3 0.00026 5.7E-09 56.6 4.1 39 178-219 103-141 (290)
335 cd06646 STKc_MAP4K5 Catalytic 97.3 0.00028 6.2E-09 55.6 4.1 40 177-219 103-142 (267)
336 cd07844 STKc_PCTAIRE_like Cata 97.3 0.00028 6E-09 56.5 4.0 39 178-219 101-139 (291)
337 cd06612 STKc_MST1_2 Catalytic 97.3 0.00037 8E-09 54.5 4.7 40 177-219 96-135 (256)
338 cd06616 PKc_MKK4 Catalytic dom 97.3 0.00028 6E-09 56.4 4.0 41 177-219 104-144 (288)
339 cd07879 STKc_p38delta_MAPK13 C 97.3 0.00024 5.1E-09 58.6 3.7 39 178-219 115-153 (342)
340 cd06655 STKc_PAK2 Catalytic do 97.3 0.00026 5.7E-09 57.1 3.9 40 177-219 112-151 (296)
341 cd05611 STKc_Rim15_like Cataly 97.3 0.00028 6E-09 55.5 4.0 39 178-219 95-133 (260)
342 KOG1290 Serine/threonine prote 97.3 0.0002 4.2E-09 60.5 3.1 37 179-217 186-222 (590)
343 cd08221 STKc_Nek9 Catalytic do 97.3 0.00032 6.9E-09 55.0 4.2 40 177-219 98-137 (256)
344 KOG0607 MAP kinase-interacting 97.3 0.00021 4.6E-09 57.5 3.0 33 181-216 177-209 (463)
345 cd06642 STKc_STK25-YSK1 Cataly 97.3 0.00039 8.5E-09 55.3 4.7 40 177-219 98-137 (277)
346 cd07834 STKc_MAPK Catalytic do 97.3 0.00028 6.2E-09 57.6 4.0 41 176-219 99-139 (330)
347 cd08219 STKc_Nek3 Catalytic do 97.3 0.00041 8.8E-09 54.4 4.7 39 178-219 98-136 (255)
348 cd06613 STKc_MAP4K3_like Catal 97.3 0.00042 9.2E-09 54.3 4.8 39 178-219 99-137 (262)
349 PLN00009 cyclin-dependent kina 97.3 0.00043 9.4E-09 55.5 4.9 37 179-218 101-137 (294)
350 cd06638 STKc_myosinIIIA Cataly 97.3 0.00033 7.1E-09 55.9 4.1 40 177-219 121-160 (286)
351 cd07829 STKc_CDK_like Catalyti 97.3 0.00038 8.2E-09 55.3 4.4 41 176-219 94-134 (282)
352 KOG0694 Serine/threonine prote 97.3 0.00029 6.3E-09 61.5 3.9 39 179-220 467-505 (694)
353 cd05112 PTKc_Itk Catalytic dom 97.2 0.00043 9.3E-09 54.2 4.5 40 177-219 97-136 (256)
354 cd05577 STKc_GRK Catalytic dom 97.2 0.00029 6.4E-09 56.0 3.6 39 178-219 93-131 (277)
355 cd06645 STKc_MAP4K3 Catalytic 97.2 0.00044 9.4E-09 54.6 4.6 40 177-219 103-142 (267)
356 cd07833 STKc_CDKL Catalytic do 97.2 0.00043 9.4E-09 55.1 4.6 40 177-219 97-136 (288)
357 cd06650 PKc_MEK1 Catalytic dom 97.2 0.00045 9.9E-09 56.7 4.8 41 177-219 100-140 (333)
358 cd06626 STKc_MEKK4 Catalytic d 97.2 0.00032 6.9E-09 55.1 3.7 40 177-219 96-135 (264)
359 cd05580 STKc_PKA Catalytic dom 97.2 0.00047 1E-08 55.3 4.7 39 178-219 99-137 (290)
360 cd07842 STKc_CDK8_like Catalyt 97.2 0.00037 7.9E-09 56.4 4.1 37 179-218 107-143 (316)
361 cd07830 STKc_MAK_like Catalyti 97.2 0.00043 9.4E-09 55.0 4.5 39 178-219 97-135 (283)
362 cd06632 STKc_MEKK1_plant Catal 97.2 0.00039 8.4E-09 54.4 4.0 40 177-219 99-138 (258)
363 cd06608 STKc_myosinIII_like Ca 97.2 0.00036 7.7E-09 55.1 3.8 41 176-219 109-149 (275)
364 KOG0197 Tyrosine kinases [Sign 97.2 0.00047 1E-08 58.3 4.6 38 179-219 302-339 (468)
365 cd08218 STKc_Nek1 Catalytic do 97.2 0.00045 9.6E-09 54.1 4.3 39 178-219 99-137 (256)
366 cd06622 PKc_MAPKK_PBS2_like Ca 97.2 0.00045 9.7E-09 55.1 4.3 41 177-219 99-139 (286)
367 cd06633 STKc_TAO3 Catalytic do 97.2 0.00068 1.5E-08 55.1 5.4 41 176-219 117-157 (313)
368 cd06611 STKc_SLK_like Catalyti 97.2 0.00043 9.4E-09 55.1 4.2 39 178-219 101-139 (280)
369 cd06631 STKc_YSK4 Catalytic do 97.2 0.00043 9.3E-09 54.5 4.1 39 178-219 100-138 (265)
370 cd06629 STKc_MAPKKK_Bck1_like 97.2 0.00053 1.2E-08 54.2 4.6 40 177-219 105-144 (272)
371 cd06627 STKc_Cdc7_like Catalyt 97.2 0.00043 9.2E-09 54.0 4.0 41 176-219 95-135 (254)
372 cd06615 PKc_MEK Catalytic doma 97.2 0.00052 1.1E-08 55.6 4.6 40 178-219 97-136 (308)
373 cd06636 STKc_MAP4K4_6 Catalyti 97.2 0.00039 8.5E-09 55.4 3.8 39 178-219 119-157 (282)
374 cd05578 STKc_Yank1 Catalytic d 97.2 0.00046 9.9E-09 54.2 4.0 38 179-219 99-136 (258)
375 cd08220 STKc_Nek8 Catalytic do 97.2 0.00045 9.8E-09 54.0 4.0 39 178-219 99-137 (256)
376 cd06614 STKc_PAK Catalytic dom 97.2 0.0006 1.3E-08 54.4 4.7 41 176-219 112-152 (286)
377 cd06630 STKc_MEKK1 Catalytic d 97.1 0.00049 1.1E-08 54.2 4.0 40 177-219 100-139 (268)
378 cd05583 STKc_MSK_N N-terminal 97.1 0.0005 1.1E-08 55.0 4.0 39 178-219 103-141 (288)
379 PRK10345 hypothetical protein; 97.1 0.00042 9E-09 53.3 3.3 32 184-218 108-140 (210)
380 PTZ00266 NIMA-related protein 97.1 0.00048 1E-08 63.9 4.2 42 177-218 115-160 (1021)
381 cd06917 STKc_NAK1_like Catalyt 97.1 0.0005 1.1E-08 54.5 3.9 40 177-219 98-137 (277)
382 cd06610 STKc_OSR1_SPAK Catalyt 97.1 0.00064 1.4E-08 53.4 4.5 40 177-219 99-138 (267)
383 cd08215 STKc_Nek Catalytic dom 97.1 0.00066 1.4E-08 52.9 4.5 40 177-219 100-139 (258)
384 cd05122 PKc_STE Catalytic doma 97.1 0.00057 1.2E-08 53.0 4.0 41 176-219 94-134 (253)
385 KOG0665 Jun-N-terminal kinase 97.1 0.00053 1.1E-08 55.0 3.7 36 181-219 119-154 (369)
386 PRK12274 serine/threonine prot 97.1 0.00061 1.3E-08 52.2 3.9 33 184-219 95-128 (218)
387 cd07851 STKc_p38 Catalytic dom 97.1 0.00054 1.2E-08 56.4 4.0 40 177-219 115-154 (343)
388 cd06657 STKc_PAK4 Catalytic do 97.1 0.00057 1.2E-08 55.0 4.0 40 177-219 113-152 (292)
389 KOG0668 Casein kinase II, alph 97.1 0.00044 9.5E-09 53.2 3.0 34 183-219 135-168 (338)
390 cd05572 STKc_cGK_PKG Catalytic 97.1 0.00055 1.2E-08 53.8 3.8 39 178-219 91-129 (262)
391 cd06634 STKc_TAO2 Catalytic do 97.1 0.00064 1.4E-08 55.1 4.2 39 178-219 113-151 (308)
392 KOG1345 Serine/threonine kinas 97.1 0.00037 8.1E-09 54.9 2.6 34 180-216 121-154 (378)
393 cd05123 STKc_AGC Catalytic dom 97.1 0.00091 2E-08 52.0 4.9 39 178-219 91-129 (250)
394 cd07858 STKc_TEY_MAPK_plant Ca 97.1 0.00061 1.3E-08 56.0 4.0 40 177-219 105-144 (337)
395 cd06606 STKc_MAPKKK Catalytic 97.1 0.00057 1.2E-08 53.2 3.7 41 176-219 97-137 (260)
396 KOG0664 Nemo-like MAPK-related 97.1 0.00042 9.1E-09 54.6 2.7 34 183-219 159-192 (449)
397 cd08528 STKc_Nek10 Catalytic d 97.1 0.0007 1.5E-08 53.5 4.1 39 178-219 111-150 (269)
398 KOG0033 Ca2+/calmodulin-depend 97.1 0.00058 1.3E-08 53.1 3.3 36 180-218 110-145 (355)
399 cd08530 STKc_CNK2-like Catalyt 97.0 0.00088 1.9E-08 52.3 4.5 40 177-219 100-139 (256)
400 cd05581 STKc_PDK1 Catalytic do 97.0 0.00079 1.7E-08 53.3 4.1 41 176-219 98-138 (280)
401 cd07854 STKc_MAPK4_6 Catalytic 97.0 0.0006 1.3E-08 56.1 3.5 39 177-218 111-149 (342)
402 KOG0586 Serine/threonine prote 97.0 0.0007 1.5E-08 58.4 3.9 38 180-220 155-192 (596)
403 KOG0604 MAP kinase-activated p 97.0 0.0006 1.3E-08 54.4 3.2 37 179-218 160-196 (400)
404 cd06605 PKc_MAPKK Catalytic do 97.0 0.00074 1.6E-08 53.1 3.8 39 178-219 98-137 (265)
405 cd06623 PKc_MAPKK_plant_like C 97.0 0.00066 1.4E-08 53.2 3.5 40 177-219 96-136 (264)
406 cd06609 STKc_MST3_like Catalyt 97.0 0.00072 1.6E-08 53.6 3.7 41 176-219 94-134 (274)
407 KOG0605 NDR and related serine 97.0 0.0008 1.7E-08 57.3 4.1 35 183-220 244-278 (550)
408 PTZ00024 cyclin-dependent prot 97.0 0.00078 1.7E-08 55.2 3.9 40 177-219 116-155 (335)
409 KOG3665 ZYG-1-like serine/thre 97.0 0.0012 2.6E-08 59.4 5.3 97 4-102 146-264 (699)
410 cd06641 STKc_MST3 Catalytic do 97.0 0.0009 2E-08 53.2 4.1 40 177-219 98-137 (277)
411 cd08222 STKc_Nek11 Catalytic d 97.0 0.0009 2E-08 52.6 4.0 39 177-218 103-141 (260)
412 PF00560 LRR_1: Leucine Rich R 97.0 0.00028 6E-09 33.5 0.7 18 66-84 2-19 (22)
413 cd06640 STKc_MST4 Catalytic do 97.0 0.001 2.2E-08 52.9 4.2 39 178-219 99-137 (277)
414 cd06647 STKc_PAK_I Catalytic d 96.9 0.001 2.3E-08 53.4 4.2 40 177-219 112-151 (293)
415 PRK01723 3-deoxy-D-manno-octul 96.9 0.00084 1.8E-08 52.7 3.4 31 186-219 148-178 (239)
416 KOG4250 TANK binding protein k 96.9 0.0012 2.6E-08 58.1 4.5 35 180-217 120-154 (732)
417 KOG0611 Predicted serine/threo 96.9 0.0015 3.2E-08 54.4 4.7 39 179-220 152-190 (668)
418 KOG4721 Serine/threonine prote 96.9 0.0005 1.1E-08 59.4 2.1 35 181-218 213-247 (904)
419 PRK15386 type III secretion pr 96.9 0.0026 5.6E-08 53.5 6.1 31 5-39 51-81 (426)
420 cd06620 PKc_MAPKK_Byr1_like Ca 96.9 0.0012 2.6E-08 52.7 4.0 41 177-219 100-140 (284)
421 KOG0608 Warts/lats-like serine 96.9 0.0011 2.3E-08 58.1 3.8 33 185-220 734-766 (1034)
422 cd06621 PKc_MAPKK_Pek1_like Ca 96.9 0.0011 2.5E-08 52.9 3.9 39 178-219 103-141 (287)
423 cd05144 RIO2_C RIO kinase fami 96.9 0.0012 2.6E-08 50.1 3.8 35 182-219 127-161 (198)
424 KOG0194 Protein tyrosine kinas 96.8 0.0008 1.7E-08 57.5 2.6 39 178-219 260-298 (474)
425 KOG4236 Serine/threonine prote 96.8 0.0012 2.6E-08 56.6 3.5 31 185-218 669-699 (888)
426 KOG0577 Serine/threonine prote 96.8 0.0008 1.7E-08 58.4 2.5 37 181-220 127-163 (948)
427 KOG1027 Serine/threonine prote 96.8 0.0012 2.5E-08 59.2 3.4 33 183-218 609-641 (903)
428 KOG2739 Leucine-rich acidic nu 96.8 0.00096 2.1E-08 52.0 2.6 87 22-121 35-126 (260)
429 KOG1025 Epidermal growth facto 96.8 0.0029 6.2E-08 57.0 5.7 37 179-218 797-833 (1177)
430 cd07856 STKc_Sty1_Hog1 Catalyt 96.7 0.0017 3.7E-08 53.2 4.0 39 178-219 106-144 (328)
431 KOG0032 Ca2+/calmodulin-depend 96.7 0.0016 3.4E-08 54.7 3.5 37 179-218 134-170 (382)
432 cd00180 PKc Catalytic domain o 96.7 0.0025 5.3E-08 47.6 4.2 39 177-218 89-127 (215)
433 KOG0597 Serine-threonine prote 96.7 0.0023 5E-08 55.4 4.2 38 179-219 99-136 (808)
434 cd05120 APH_ChoK_like Aminogly 96.7 0.0036 7.8E-08 44.3 4.8 40 179-218 85-124 (155)
435 PRK09605 bifunctional UGMP fam 96.7 0.0017 3.7E-08 57.0 3.6 37 179-218 427-463 (535)
436 KOG0589 Serine/threonine prote 96.7 0.0012 2.7E-08 55.4 2.6 37 180-219 106-142 (426)
437 KOG3665 ZYG-1-like serine/thre 96.6 0.00098 2.1E-08 60.0 1.9 81 6-97 122-204 (699)
438 KOG1909 Ran GTPase-activating 96.6 0.00031 6.7E-09 56.9 -1.2 91 5-101 156-254 (382)
439 KOG4645 MAPKKK (MAP kinase kin 96.6 0.0021 4.6E-08 60.3 3.8 33 184-219 1338-1370(1509)
440 smart00090 RIO RIO-like kinase 96.6 0.0031 6.8E-08 49.4 4.3 35 181-217 149-183 (237)
441 cd05119 RIO RIO kinase family, 96.6 0.002 4.3E-08 48.1 3.1 34 181-217 115-149 (187)
442 PRK14879 serine/threonine prot 96.6 0.0027 5.9E-08 48.4 3.8 34 181-217 96-129 (211)
443 KOG0690 Serine/threonine prote 96.6 0.0015 3.2E-08 52.9 2.4 33 185-220 273-305 (516)
444 smart00220 S_TKc Serine/Threon 96.5 0.0033 7.1E-08 48.2 4.0 40 177-219 84-123 (244)
445 KOG0669 Cyclin T-dependent kin 96.5 0.0025 5.5E-08 49.8 3.0 42 176-220 120-161 (376)
446 KOG1094 Discoidin domain recep 96.5 0.0084 1.8E-07 52.2 6.4 36 182-220 639-674 (807)
447 KOG1164 Casein kinase (serine/ 96.5 0.0025 5.4E-08 52.2 3.1 40 176-218 118-157 (322)
448 COG5238 RNA1 Ran GTPase-activa 96.4 0.0011 2.4E-08 52.3 0.7 96 5-101 29-133 (388)
449 PF13504 LRR_7: Leucine rich r 96.4 0.0018 3.9E-08 28.6 1.1 13 7-19 2-14 (17)
450 KOG2982 Uncharacterized conser 96.4 0.00087 1.9E-08 53.5 0.1 40 5-44 70-111 (418)
451 KOG1151 Tousled-like protein k 96.4 0.0064 1.4E-07 51.3 5.1 38 179-217 567-604 (775)
452 KOG1163 Casein kinase (serine/ 96.4 0.0048 1E-07 48.0 4.0 36 179-217 110-145 (341)
453 KOG1167 Serine/threonine prote 96.3 0.0037 8E-08 51.8 3.5 37 179-218 131-167 (418)
454 TIGR03724 arch_bud32 Kae1-asso 96.3 0.0049 1.1E-07 46.5 3.7 31 184-217 94-124 (199)
455 KOG2123 Uncharacterized conser 96.3 0.00018 3.9E-09 56.8 -4.3 82 6-102 19-102 (388)
456 PRK10359 lipopolysaccharide co 96.3 0.004 8.8E-08 48.4 3.1 32 185-219 140-171 (232)
457 PF14531 Kinase-like: Kinase-l 96.2 0.0067 1.4E-07 48.8 4.3 39 179-220 144-182 (288)
458 KOG0574 STE20-like serine/thre 96.2 0.0036 7.8E-08 50.2 2.7 39 179-220 128-166 (502)
459 PRK15386 type III secretion pr 96.2 0.0084 1.8E-07 50.5 4.7 41 7-51 73-115 (426)
460 KOG2120 SCF ubiquitin ligase, 96.1 0.00031 6.8E-09 56.0 -3.7 38 3-40 207-244 (419)
461 KOG2982 Uncharacterized conser 96.0 0.0035 7.6E-08 50.2 1.7 86 28-121 69-156 (418)
462 KOG0612 Rho-associated, coiled 96.0 0.0073 1.6E-07 56.1 3.8 37 179-220 176-212 (1317)
463 KOG0473 Leucine-rich repeat pr 96.0 0.00021 4.6E-09 55.0 -5.0 86 3-101 39-124 (326)
464 KOG2123 Uncharacterized conser 96.0 0.00082 1.8E-08 53.2 -2.0 81 3-94 38-123 (388)
465 smart00221 STYKc Protein kinas 95.9 0.0096 2.1E-07 45.2 3.8 40 177-219 95-134 (225)
466 KOG0696 Serine/threonine prote 95.9 0.0075 1.6E-07 50.4 3.2 37 181-220 451-487 (683)
467 KOG0662 Cyclin-dependent kinas 95.9 0.0056 1.2E-07 45.5 2.2 37 181-220 102-138 (292)
468 KOG4717 Serine/threonine prote 95.9 0.007 1.5E-07 52.0 3.0 36 180-218 118-153 (864)
469 PF13504 LRR_7: Leucine rich r 95.8 0.0048 1E-07 27.2 1.1 13 31-43 2-14 (17)
470 KOG0196 Tyrosine kinase, EPH ( 95.8 0.016 3.5E-07 52.0 5.2 38 179-219 730-767 (996)
471 KOG1165 Casein kinase (serine/ 95.8 0.022 4.8E-07 46.4 5.4 40 176-218 120-159 (449)
472 KOG0201 Serine/threonine prote 95.8 0.0071 1.5E-07 50.6 2.7 32 185-219 116-147 (467)
473 smart00370 LRR Leucine-rich re 95.8 0.0077 1.7E-07 29.6 1.9 14 6-19 2-15 (26)
474 smart00369 LRR_TYP Leucine-ric 95.8 0.0077 1.7E-07 29.6 1.9 14 6-19 2-15 (26)
475 KOG0579 Ste20-like serine/thre 95.8 0.0091 2E-07 52.6 3.4 37 180-219 130-166 (1187)
476 KOG0671 LAMMER dual specificit 95.8 0.014 3.1E-07 48.0 4.3 36 179-217 191-226 (415)
477 COG0515 SPS1 Serine/threonine 95.7 0.012 2.6E-07 46.8 3.8 38 179-219 100-137 (384)
478 KOG1152 Signal transduction se 95.7 0.012 2.5E-07 51.3 3.7 39 179-220 669-707 (772)
479 PF13306 LRR_5: Leucine rich r 95.7 0.027 5.9E-07 39.2 5.1 85 1-98 7-91 (129)
480 KOG4279 Serine/threonine prote 95.6 0.011 2.4E-07 52.6 3.4 32 184-218 679-710 (1226)
481 PF08693 SKG6: Transmembrane a 95.6 0.0045 9.8E-08 33.7 0.5 31 144-174 8-38 (40)
482 COG5238 RNA1 Ran GTPase-activa 95.4 0.015 3.2E-07 46.2 3.0 115 2-121 88-224 (388)
483 KOG1095 Protein tyrosine kinas 95.3 0.013 2.9E-07 54.4 3.1 38 179-219 801-838 (1025)
484 cd05151 ChoK Choline Kinase (C 95.2 0.03 6.5E-07 40.9 4.1 35 184-218 87-123 (170)
485 KOG1026 Nerve growth factor re 95.2 0.02 4.2E-07 51.6 3.5 38 179-219 602-639 (774)
486 KOG0695 Serine/threonine prote 95.2 0.024 5.2E-07 46.2 3.7 33 185-220 356-388 (593)
487 smart00370 LRR Leucine-rich re 95.2 0.02 4.4E-07 28.1 2.1 19 29-48 1-19 (26)
488 smart00369 LRR_TYP Leucine-ric 95.2 0.02 4.4E-07 28.1 2.1 19 29-48 1-19 (26)
489 PF06293 Kdo: Lipopolysacchari 94.9 0.036 7.8E-07 42.4 3.9 36 181-219 119-154 (206)
490 KOG0200 Fibroblast/platelet-de 94.8 0.028 6E-07 50.3 3.5 38 179-219 417-454 (609)
491 KOG4158 BRPK/PTEN-induced prot 94.6 0.04 8.6E-07 46.1 3.6 33 181-216 342-374 (598)
492 KOG1024 Receptor-like protein 94.5 0.1 2.2E-06 43.6 5.6 35 182-219 398-432 (563)
493 cd05146 RIO3_euk RIO kinase fa 94.5 0.051 1.1E-06 41.3 3.7 34 182-218 126-160 (197)
494 KOG0587 Traf2- and Nck-interac 94.3 0.074 1.6E-06 48.4 4.8 39 178-219 121-159 (953)
495 PRK15123 lipopolysaccharide co 94.0 0.068 1.5E-06 42.7 3.7 35 181-218 139-173 (268)
496 KOG0596 Dual specificity; seri 94.0 0.082 1.8E-06 45.9 4.3 35 181-218 461-495 (677)
497 PF12260 PIP49_C: Protein-kina 93.9 0.13 2.7E-06 38.9 4.9 43 177-219 56-98 (188)
498 KOG1166 Mitotic checkpoint ser 93.8 0.067 1.5E-06 49.8 3.7 37 179-218 793-829 (974)
499 PF13306 LRR_5: Leucine rich r 93.6 0.14 3.1E-06 35.4 4.5 83 1-97 30-112 (129)
500 PF13516 LRR_6: Leucine Rich r 93.4 0.015 3.2E-07 28.0 -0.6 16 6-21 2-17 (24)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.96 E-value=3.3e-29 Score=230.80 Aligned_cols=131 Identities=30% Similarity=0.487 Sum_probs=106.1
Q ss_pred CCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCCEEec
Q 038318 6 TYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLEFLDI 71 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~~L~l 71 (220)
++|+.|++++|++++.+|..+.++++|+.|++++|.+++.+|+.+..+++| |..+..+++|+.||+
T Consensus 475 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 554 (968)
T PLN00113 475 KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDL 554 (968)
T ss_pred ccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEEC
Confidence 567777777777777777778888888888888888888888777776665 778888889999999
Q ss_pred cCCcccccCCccccCCCCCCeeeccCCcccccCCCCcccccccccccccccCCCCCCC-CCCCCcc
Q 038318 72 SNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWNYTLCGPPR-LQVPSCK 136 (220)
Q Consensus 72 s~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n~~l~~~~~-~~~~~c~ 136 (220)
++|+++|.+|..+.++++|+.+++++|++.|.+|..+.+..+....+.+|+.+||..+ ...++|.
T Consensus 555 s~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~ 620 (968)
T PLN00113 555 SQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCK 620 (968)
T ss_pred CCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCc
Confidence 9999998889888888889999999999998888877777777888889988998654 3455664
No 2
>PLN03150 hypothetical protein; Provisional
Probab=99.82 E-value=3.2e-20 Score=163.20 Aligned_cols=118 Identities=32% Similarity=0.506 Sum_probs=105.1
Q ss_pred CCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCccccC
Q 038318 7 YLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFKG 86 (220)
Q Consensus 7 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 86 (220)
.++.|+|++|.++|.+|..+..+++|+.|+|++|.++|.+|. .++.+++|+.||+++|+++|.+|+.+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~----------~~~~l~~L~~LdLs~N~lsg~iP~~l~~ 488 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPP----------SLGSITSLEVLDLSYNSFNGSIPESLGQ 488 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCCh----------HHhCCCCCCEEECCCCCCCCCCchHHhc
Confidence 377899999999999999999999999999999999999998 4577889999999999999999999999
Q ss_pred CCCCCeeeccCCcccccCCCC--cccccccccccccccCCCCCCCCCCCCcc
Q 038318 87 LSRLKQLNAAHSKLEEEIPIE--RPLRNILAQSFIWNYTLCGPPRLQVPSCK 136 (220)
Q Consensus 87 l~~L~~l~l~~n~l~~~~p~~--~~~~~l~~l~~~~n~~l~~~~~~~~~~c~ 136 (220)
+++|+.|++++|+++|.+|.. ....++..+++.+|+.+|+.+ ....|.
T Consensus 489 L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p--~l~~C~ 538 (623)
T PLN03150 489 LTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP--GLRACG 538 (623)
T ss_pred CCCCCEEECcCCcccccCChHHhhccccCceEEecCCccccCCC--CCCCCc
Confidence 999999999999999999986 233456788999999999864 345675
No 3
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.70 E-value=7.1e-17 Score=149.34 Aligned_cols=124 Identities=29% Similarity=0.424 Sum_probs=95.8
Q ss_pred CCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCCEE
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLEFL 69 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~~L 69 (220)
.+++|+.|+|++|++.+.+|..+ ..++|+.|++++|++++.+|..+..+++| |..+..+++|++|
T Consensus 450 ~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 528 (968)
T PLN00113 450 DMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSL 528 (968)
T ss_pred cCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEE
Confidence 34455555555555555555433 34567777777777777778777766665 8889999999999
Q ss_pred eccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCCCCC
Q 038318 70 DISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCGPPR 129 (220)
Q Consensus 70 ~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~~~~ 129 (220)
++++|.++|.+|..+..+++|+.|++++|++++.+|.. ..+..++.+++++| .+.|..|
T Consensus 529 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N-~l~~~~p 588 (968)
T PLN00113 529 DLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHN-HLHGSLP 588 (968)
T ss_pred ECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCC-cceeeCC
Confidence 99999999999999999999999999999999999887 67888999999999 4555443
No 4
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.56 E-value=1.4e-16 Score=115.28 Aligned_cols=117 Identities=27% Similarity=0.389 Sum_probs=99.8
Q ss_pred CCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC-------------hhhhcCCCCCCEE
Q 038318 3 GSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL-------------VDCFGSLTSLEFL 69 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L-------------p~~~~~l~~L~~L 69 (220)
-++.+++.|.||+|+++ .+|+.+..+.+|+.|++++|+++ .+|..+.++++| |..|+.++.|+.|
T Consensus 30 f~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~~lprgfgs~p~levl 107 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLNILPRGFGSFPALEVL 107 (264)
T ss_pred cchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhhcCccccCCCchhhhh
Confidence 35677889999999999 89999999999999999999998 899988888776 8899999999999
Q ss_pred eccCCcccc-cCCccccCCCCCCeeeccCCcccccCCCC-ccccccccccccccc
Q 038318 70 DISNNNLFG-KIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNY 122 (220)
Q Consensus 70 ~ls~N~l~~-~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~ 122 (220)
|+++|++.. .+|..|..+..|+-|+++.|.+. .+|.. +.+++++.+.+..|.
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdnd 161 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDND 161 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCc
Confidence 999998863 56888888888888888888888 45555 788888888888883
No 5
>PLN03150 hypothetical protein; Provisional
Probab=99.46 E-value=2.4e-13 Score=120.02 Aligned_cols=94 Identities=30% Similarity=0.476 Sum_probs=82.6
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIP 81 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p 81 (220)
|++|++|+.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|+. ++.+++|+.|++++|+++|.+|
T Consensus 438 i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~----------l~~L~~L~~L~Ls~N~l~g~iP 507 (623)
T PLN03150 438 ISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPES----------LGQLTSLRILNLNGNSLSGRVP 507 (623)
T ss_pred HhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchH----------HhcCCCCCEEECcCCcccccCC
Confidence 567899999999999999999999999999999999999999999984 5778899999999999999999
Q ss_pred ccccCC-CCCCeeeccCCcccccCC
Q 038318 82 KSFKGL-SRLKQLNAAHSKLEEEIP 105 (220)
Q Consensus 82 ~~~~~l-~~L~~l~l~~n~l~~~~p 105 (220)
..+..+ .++..+++.+|......|
T Consensus 508 ~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 508 AALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred hHHhhccccCceEEecCCccccCCC
Confidence 988764 467788999887543333
No 6
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.45 E-value=1.7e-15 Score=109.79 Aligned_cols=123 Identities=21% Similarity=0.306 Sum_probs=109.7
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC---------------hhhhcCCCCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL---------------VDCFGSLTSL 66 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L---------------p~~~~~l~~L 66 (220)
+.+|.+|+.|++++|+++ ++|.++++++.|+.|+++.|.+. .+|..||.++.| |..|..++.|
T Consensus 52 ia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tl 129 (264)
T KOG0617|consen 52 IAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTL 129 (264)
T ss_pred HHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHH
Confidence 457889999999999999 99999999999999999999998 899999988876 8888889999
Q ss_pred CEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCCCCC
Q 038318 67 EFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCGPPR 129 (220)
Q Consensus 67 ~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~~~~ 129 (220)
..|.+++|.+. .+|..++++++|+.|.+..|.+- .+|.. +.+..++.+.+.+| .+.--+|
T Consensus 130 ralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn-rl~vlpp 190 (264)
T KOG0617|consen 130 RALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN-RLTVLPP 190 (264)
T ss_pred HHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc-eeeecCh
Confidence 99999999998 78888999999999999999988 57777 88999999999999 6665443
No 7
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.34 E-value=2.3e-13 Score=114.85 Aligned_cols=121 Identities=27% Similarity=0.258 Sum_probs=93.7
Q ss_pred CCCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCC
Q 038318 1 MLGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSL 66 (220)
Q Consensus 1 ~l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L 66 (220)
++-+|+.|+.|+||+|.|+..-++++.-.+.|+.|+|++|+++..-++++..|.+| ...|..+.+|
T Consensus 288 ~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL 367 (873)
T KOG4194|consen 288 WLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSL 367 (873)
T ss_pred cccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhh
Confidence 35678888899999999887778888888889999999999985555566555554 5567788888
Q ss_pred CEEeccCCcccccCCc---cccCCCCCCeeeccCCcccccCCCC--ccccccccccccccc
Q 038318 67 EFLDISNNNLFGKIPK---SFKGLSRLKQLNAAHSKLEEEIPIE--RPLRNILAQSFIWNY 122 (220)
Q Consensus 67 ~~L~ls~N~l~~~~p~---~~~~l~~L~~l~l~~n~l~~~~p~~--~~~~~l~~l~~~~n~ 122 (220)
+.|||++|.+++.+.+ .|.++++|+.|++.+|++. .+|.. ..+..|+.+++.+|+
T Consensus 368 ~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk-~I~krAfsgl~~LE~LdL~~Na 427 (873)
T KOG4194|consen 368 HKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLK-SIPKRAFSGLEALEHLDLGDNA 427 (873)
T ss_pred hhhcCcCCeEEEEEecchhhhccchhhhheeecCceee-ecchhhhccCcccceecCCCCc
Confidence 8888888888876654 4667888888888888887 45544 677888888888773
No 8
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.32 E-value=1.2e-12 Score=108.37 Aligned_cols=43 Identities=33% Similarity=0.546 Sum_probs=41.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
+|.+|++||.++|+||+|||+.+.|+|+|||+|++|||||+++
T Consensus 172 ~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~ 214 (361)
T KOG1187|consen 172 DWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDF 214 (361)
T ss_pred CHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCC
Confidence 5999999999999999999999999999999999999999875
No 9
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.29 E-value=3e-13 Score=115.25 Aligned_cols=120 Identities=28% Similarity=0.407 Sum_probs=89.2
Q ss_pred CCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC---------------hhhhcCCCCCCEE
Q 038318 5 LTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL---------------VDCFGSLTSLEFL 69 (220)
Q Consensus 5 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L---------------p~~~~~l~~L~~L 69 (220)
+++|+.|+||+|+++ ++....+...+|++|+||.|+++ .+|+.+++|+.| |..++.|..|+.+
T Consensus 244 l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf 321 (1255)
T KOG0444|consen 244 LRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVF 321 (1255)
T ss_pred hhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHH
Confidence 444455555555554 44444444555555555556665 678877777766 8889999999999
Q ss_pred eccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCCCC
Q 038318 70 DISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCGPP 128 (220)
Q Consensus 70 ~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~~~ 128 (220)
..++|.+. .+|+.+..+..|+.|.|+.|.+- .+|.. -.++.+..+++..||.+.-+|
T Consensus 322 ~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 322 HAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPP 379 (1255)
T ss_pred Hhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCC
Confidence 99999987 88999999999999999999987 67777 677889999999998877544
No 10
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.27 E-value=5.3e-13 Score=108.21 Aligned_cols=113 Identities=22% Similarity=0.246 Sum_probs=88.0
Q ss_pred CCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC-------------hhhhc-CCCCCCEEe
Q 038318 5 LTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL-------------VDCFG-SLTSLEFLD 70 (220)
Q Consensus 5 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L-------------p~~~~-~l~~L~~L~ 70 (220)
++.|+.||...|.++ .+|++++.|.+|..|+|..|++. .+| +|+.+..| |.+.. .++++..||
T Consensus 182 m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLD 258 (565)
T KOG0472|consen 182 MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLD 258 (565)
T ss_pred HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeee
Confidence 445666666666665 67777777777777777777776 566 56655544 66555 899999999
Q ss_pred ccCCcccccCCccccCCCCCCeeeccCCcccccCCCCccccccccccccccc
Q 038318 71 ISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWNY 122 (220)
Q Consensus 71 ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n~ 122 (220)
+.+|+++ +.|+++..+.+|+.||+|+|.+++..++-+.+ ++..+.+.|||
T Consensus 259 LRdNklk-e~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNP 308 (565)
T KOG0472|consen 259 LRDNKLK-EVPDEICLLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNP 308 (565)
T ss_pred ccccccc-cCchHHHHhhhhhhhcccCCccccCCcccccc-eeeehhhcCCc
Confidence 9999998 89999999999999999999999755554777 89999999996
No 11
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.25 E-value=4e-13 Score=113.43 Aligned_cols=121 Identities=22% Similarity=0.219 Sum_probs=92.0
Q ss_pred CCCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCC
Q 038318 1 MLGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSL 66 (220)
Q Consensus 1 ~l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L 66 (220)
+|..|.++++|+|+.|+++..--.++.+|+.|+.|+||+|.+....++++.-.++| +++|..|..|
T Consensus 264 ~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~L 343 (873)
T KOG4194|consen 264 AFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQL 343 (873)
T ss_pred ceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHh
Confidence 46677888888898888886666778889999999999999887777766655554 6667777777
Q ss_pred CEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC----cccccccccccccc
Q 038318 67 EFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE----RPLRNILAQSFIWN 121 (220)
Q Consensus 67 ~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~----~~~~~l~~l~~~~n 121 (220)
++|+|++|.++..-...|..+++|++|||++|.+++.+... ..++.|+.+++.||
T Consensus 344 e~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gN 402 (873)
T KOG4194|consen 344 EELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGN 402 (873)
T ss_pred hhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCc
Confidence 77777777776555556777788888888888888776554 45777888888888
No 12
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.25 E-value=5.3e-12 Score=93.60 Aligned_cols=106 Identities=27% Similarity=0.399 Sum_probs=39.6
Q ss_pred CCCCCCceecCCCccCCccChhhh-ccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCc
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLW-NVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPK 82 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~ 82 (220)
+..+++.|+|++|.|+ .+. .++ .+.+|+.|+|++|.++ .++ .+..++.|+.|++++|.++ .+.+
T Consensus 17 n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-----------~l~~L~~L~~L~L~~N~I~-~i~~ 81 (175)
T PF14580_consen 17 NPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLE-----------GLPGLPRLKTLDLSNNRIS-SISE 81 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S---T-----------T----TT--EEE--SS----S-CH
T ss_pred cccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCc-ccc-----------CccChhhhhhcccCCCCCC-cccc
Confidence 4556899999999998 554 465 5889999999999998 555 2567889999999999998 5554
Q ss_pred cc-cCCCCCCeeeccCCcccccCCCC--cccccccccccccccCCC
Q 038318 83 SF-KGLSRLKQLNAAHSKLEEEIPIE--RPLRNILAQSFIWNYTLC 125 (220)
Q Consensus 83 ~~-~~l~~L~~l~l~~n~l~~~~p~~--~~~~~l~~l~~~~n~~l~ 125 (220)
.+ ..+++|+.|++++|++...---. ..+++|..+++.+|| +|
T Consensus 82 ~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NP-v~ 126 (175)
T PF14580_consen 82 GLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNP-VC 126 (175)
T ss_dssp HHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-G-GG
T ss_pred chHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCc-cc
Confidence 45 36899999999999998532211 678899999999994 44
No 13
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.23 E-value=2.8e-12 Score=104.03 Aligned_cols=108 Identities=25% Similarity=0.297 Sum_probs=67.5
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIP 81 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p 81 (220)
++.+++|+.|+|++|-+. .+|.+++.+..|+.||+|.|.|. .+|..+..++ .++.+-.++|++....|
T Consensus 431 l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq----------~lEtllas~nqi~~vd~ 498 (565)
T KOG0472|consen 431 LSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQ----------TLETLLASNNQIGSVDP 498 (565)
T ss_pred HHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHH----------HHHHHHhccccccccCh
Confidence 466788888999888887 88888888888999999999887 7777554433 34444444444443333
Q ss_pred ccccCCCCCCeeeccCCcccccCCCCcccccccccccccc
Q 038318 82 KSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWN 121 (220)
Q Consensus 82 ~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n 121 (220)
+.+.+|.+|..||+.+|.+....|.-+.+.+++++.+.||
T Consensus 499 ~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gN 538 (565)
T KOG0472|consen 499 SGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGN 538 (565)
T ss_pred HHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCC
Confidence 3355555555555555555532222255555555555555
No 14
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.22 E-value=6.8e-13 Score=113.12 Aligned_cols=119 Identities=25% Similarity=0.319 Sum_probs=76.8
Q ss_pred CCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC---------------hhhhcCCCCCCE
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL---------------VDCFGSLTSLEF 68 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L---------------p~~~~~l~~L~~ 68 (220)
+|+.|-+||||+|++. .+|+.+..+..|++|+|++|.+.-.--.-+..|++| |.++..+.+|..
T Consensus 148 nLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~d 226 (1255)
T KOG0444|consen 148 NLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRD 226 (1255)
T ss_pred hhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhh
Confidence 3444445555555554 445555555555555555554431000001112222 888888899999
Q ss_pred EeccCCcccccCCccccCCCCCCeeeccCCcccccCCCCcccccccccccccccCCC
Q 038318 69 LDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWNYTLC 125 (220)
Q Consensus 69 L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n~~l~ 125 (220)
+|+|.|++. .+|+.+.++.+|+.|+||+|+++..--..+.+.++.+++++.| .+.
T Consensus 227 vDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrN-QLt 281 (1255)
T KOG0444|consen 227 VDLSENNLP-IVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRN-QLT 281 (1255)
T ss_pred ccccccCCC-cchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccc-hhc
Confidence 999999998 8899999999999999999999843333377788888888888 443
No 15
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.13 E-value=5.4e-12 Score=102.09 Aligned_cols=69 Identities=25% Similarity=0.382 Sum_probs=48.7
Q ss_pred hhhcCCCCCCEEeccCCcccccCCccccCCC------------------------CCCeeeccCCcccccCCCC-ccccc
Q 038318 58 DCFGSLTSLEFLDISNNNLFGKIPKSFKGLS------------------------RLKQLNAAHSKLEEEIPIE-RPLRN 112 (220)
Q Consensus 58 ~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~------------------------~L~~l~l~~n~l~~~~p~~-~~~~~ 112 (220)
..|..|++|+.|++++|++++.-+.+|.+.. .|+.|+|.+|+++-.-|.. ..+..
T Consensus 268 ~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~ 347 (498)
T KOG4237|consen 268 KCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFS 347 (498)
T ss_pred HHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccce
Confidence 4688999999999999999987776665544 4555566666666544544 45556
Q ss_pred ccccccccccCCCC
Q 038318 113 ILAQSFIWNYTLCG 126 (220)
Q Consensus 113 l~~l~~~~n~~l~~ 126 (220)
+..+.+-.||+.|.
T Consensus 348 l~~l~l~~Np~~Cn 361 (498)
T KOG4237|consen 348 LSTLNLLSNPFNCN 361 (498)
T ss_pred eeeeehccCcccCc
Confidence 66677777777763
No 16
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.12 E-value=6.5e-12 Score=105.79 Aligned_cols=115 Identities=28% Similarity=0.396 Sum_probs=81.4
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC-------------hhhhcCCCCCCE
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL-------------VDCFGSLTSLEF 68 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L-------------p~~~~~l~~L~~ 68 (220)
+++|..|++|||+.|+++ .+|..+..|+ |+.|-+++|+++ .+|+.++.+..| |..++.+.+|+.
T Consensus 117 i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~slpsql~~l~slr~ 193 (722)
T KOG0532|consen 117 ICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQSLPSQLGYLTSLRD 193 (722)
T ss_pred hhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhhhchHHhhhHHHHHH
Confidence 567888899999999998 8888888876 888888999887 888888755554 666666666666
Q ss_pred EeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-ccccccccccccccc
Q 038318 69 LDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNY 122 (220)
Q Consensus 69 L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~ 122 (220)
|++..|++. .+|.++..++ |..||+|+|+++ .+|.. ..+++|+++.+.+||
T Consensus 194 l~vrRn~l~-~lp~El~~Lp-Li~lDfScNkis-~iPv~fr~m~~Lq~l~LenNP 245 (722)
T KOG0532|consen 194 LNVRRNHLE-DLPEELCSLP-LIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNP 245 (722)
T ss_pred HHHhhhhhh-hCCHHHhCCc-eeeeecccCcee-ecchhhhhhhhheeeeeccCC
Confidence 666666665 5555555443 666666666666 45544 566666666666664
No 17
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.09 E-value=5.1e-11 Score=73.17 Aligned_cols=61 Identities=38% Similarity=0.536 Sum_probs=36.1
Q ss_pred CCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcc
Q 038318 6 TYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNL 76 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l 76 (220)
++|++|++++|+++...+..|..+++|++|++++|.++...|. .|..+++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~----------~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPD----------AFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETT----------TTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHH----------HHcCCCCCCEEeCcCCcC
Confidence 4566677777777633334566666666666666666632222 345566666666666653
No 18
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.06 E-value=2.2e-11 Score=107.58 Aligned_cols=107 Identities=29% Similarity=0.368 Sum_probs=66.9
Q ss_pred CCCCCCCceecCCCccCCccChh-hhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCC
Q 038318 3 GSLTYLRTPHLGSNNLTSSISLS-LWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIP 81 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p 81 (220)
-+.++|+.|+|++|++. .+|.+ +.++..|+.|+||+|.++ .+|+. +..++.|++|...+|++. .+|
T Consensus 380 ~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~t----------va~~~~L~tL~ahsN~l~-~fP 446 (1081)
T KOG0618|consen 380 VNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDT----------VANLGRLHTLRAHSNQLL-SFP 446 (1081)
T ss_pred ccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHH----------HHhhhhhHHHhhcCCcee-ech
Confidence 45566777777777776 55543 556777777777777776 66664 455556666666666666 555
Q ss_pred ccccCCCCCCeeeccCCcccccC-CCCcccccccccccccccC
Q 038318 82 KSFKGLSRLKQLNAAHSKLEEEI-PIERPLRNILAQSFIWNYT 123 (220)
Q Consensus 82 ~~~~~l~~L~~l~l~~n~l~~~~-p~~~~~~~l~~l~~~~n~~ 123 (220)
.+..++.|+.+|++.|+++... |.....++|+.++++||.+
T Consensus 447 -e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 447 -ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred -hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 5666677777777777666432 2222335677777777753
No 19
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.05 E-value=9.7e-11 Score=71.89 Aligned_cols=61 Identities=38% Similarity=0.600 Sum_probs=52.5
Q ss_pred ccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCCcc
Q 038318 30 ECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKL 100 (220)
Q Consensus 30 ~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l 100 (220)
++|++|++++|+++ .+|.. .|..+++|++|++++|+++...|..|.++++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l~-~i~~~---------~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLT-EIPPD---------SFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTES-EECTT---------TTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCC-ccCHH---------HHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 47899999999998 66653 467888999999999999977788899999999999999975
No 20
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.01 E-value=5.7e-10 Score=82.79 Aligned_cols=102 Identities=22% Similarity=0.223 Sum_probs=49.7
Q ss_pred CCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccC-Cc
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKI-PK 82 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~-p~ 82 (220)
.+.+|+.|+|++|.++ .++ .+..++.|+.|++++|.++ .+++.+ ...+++|++|++++|++...- -.
T Consensus 40 ~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l---------~~~lp~L~~L~L~~N~I~~l~~l~ 107 (175)
T PF14580_consen 40 TLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGL---------DKNLPNLQELYLSNNKISDLNELE 107 (175)
T ss_dssp T-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHH---------HHH-TT--EEE-TTS---SCCCCG
T ss_pred hhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccch---------HHhCCcCCEEECcCCcCCChHHhH
Confidence 4678999999999999 665 5888999999999999998 565432 135789999999999997421 24
Q ss_pred cccCCCCCCeeeccCCcccccCCCC-----ccccccccccc
Q 038318 83 SFKGLSRLKQLNAAHSKLEEEIPIE-----RPLRNILAQSF 118 (220)
Q Consensus 83 ~~~~l~~L~~l~l~~n~l~~~~p~~-----~~~~~l~~l~~ 118 (220)
.+..+++|+.|++.+|.++. .+.. ..++++..+|.
T Consensus 108 ~L~~l~~L~~L~L~~NPv~~-~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 108 PLSSLPKLRVLSLEGNPVCE-KKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp GGGG-TT--EEE-TT-GGGG-STTHHHHHHHH-TT-SEETT
T ss_pred HHHcCCCcceeeccCCcccc-hhhHHHHHHHHcChhheeCC
Confidence 56789999999999999984 3443 46667776664
No 21
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.85 E-value=1.5e-10 Score=102.43 Aligned_cols=105 Identities=29% Similarity=0.345 Sum_probs=95.6
Q ss_pred CCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCccc
Q 038318 5 LTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSF 84 (220)
Q Consensus 5 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~~ 84 (220)
.+.|+.|++.+|.++..+=+.+.++.+|+.|+|++|++. .+|++ .+.++..|++|++|+|.|+ .+|..+
T Consensus 358 ~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas---------~~~kle~LeeL~LSGNkL~-~Lp~tv 426 (1081)
T KOG0618|consen 358 HAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPAS---------KLRKLEELEELNLSGNKLT-TLPDTV 426 (1081)
T ss_pred hHHHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCCHH---------HHhchHHhHHHhcccchhh-hhhHHH
Confidence 456889999999999887778999999999999999998 89985 4778889999999999999 899999
Q ss_pred cCCCCCCeeeccCCcccccCCCCcccccccccccccc
Q 038318 85 KGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWN 121 (220)
Q Consensus 85 ~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n 121 (220)
..+..|++|...+|++. ..|....++.++.+|++.|
T Consensus 427 a~~~~L~tL~ahsN~l~-~fPe~~~l~qL~~lDlS~N 462 (1081)
T KOG0618|consen 427 ANLGRLHTLRAHSNQLL-SFPELAQLPQLKVLDLSCN 462 (1081)
T ss_pred HhhhhhHHHhhcCCcee-echhhhhcCcceEEecccc
Confidence 99999999999999998 6786689999999999999
No 22
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.83 E-value=1.1e-08 Score=96.52 Aligned_cols=59 Identities=20% Similarity=0.210 Sum_probs=40.8
Q ss_pred CCCCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCCccccccccccccccc
Q 038318 64 TSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWNY 122 (220)
Q Consensus 64 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n~ 122 (220)
++|+.|++++|...+.+|.+++++++|+.|++++|...+.+|....+++|+.++++++.
T Consensus 778 ~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c~ 836 (1153)
T PLN03210 778 PSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGCS 836 (1153)
T ss_pred ccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCCCccccCEEECCCCC
Confidence 35667777777666677888888888888888877544466655455666666666653
No 23
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=98.80 E-value=4.8e-10 Score=91.01 Aligned_cols=119 Identities=23% Similarity=0.261 Sum_probs=92.7
Q ss_pred CCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC---------------hhhhcCCCCCCEEec
Q 038318 7 YLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL---------------VDCFGSLTSLEFLDI 71 (220)
Q Consensus 7 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L---------------p~~~~~l~~L~~L~l 71 (220)
..+.++|..|+|+...|..|+.+++|+.||||+|+|+-.-|++|..++++ -..|++|.+|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 34678999999996666789999999999999999997778877776665 346777888888888
Q ss_pred cCCcccccCCccccCCCCCCeeeccCCcccccCCCC--cccccccccccccccCCCC
Q 038318 72 SNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE--RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 72 s~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~--~~~~~l~~l~~~~n~~l~~ 126 (220)
.-|.+.-...+.|..++++..|.+-.|.+. .++.. ..+..++.+.+..||+.|.
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icd 203 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICD 203 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccc
Confidence 888877666777888888888888888877 44443 6677778888888877764
No 24
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.79 E-value=1.1e-09 Score=89.00 Aligned_cols=112 Identities=21% Similarity=0.151 Sum_probs=59.1
Q ss_pred CCCCCCceecCCCccCCccChhhhcccc---CCeeeccCCCCCCCCChhhhcCccChhhhcCC-CCCCEEeccCCccccc
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWNVEC---ILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSL-TSLEFLDISNNNLFGK 79 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~---L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l-~~L~~L~ls~N~l~~~ 79 (220)
++++|+.|++++|.+.+..+..+..+.. |+.|++++|.+++.-...+ ...+..+ ++|+.|++++|.+++.
T Consensus 79 ~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l------~~~l~~~~~~L~~L~L~~n~l~~~ 152 (319)
T cd00116 79 KGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLL------AKGLKDLPPALEKLVLGRNRLEGA 152 (319)
T ss_pred hcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHH------HHHHHhCCCCceEEEcCCCcCCch
Confidence 3456666666666665545555544444 6666666665542111100 1234455 6677777777776632
Q ss_pred ----CCccccCCCCCCeeeccCCcccccC----CCC-cccccccccccccc
Q 038318 80 ----IPKSFKGLSRLKQLNAAHSKLEEEI----PIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 80 ----~p~~~~~l~~L~~l~l~~n~l~~~~----p~~-~~~~~l~~l~~~~n 121 (220)
++..+..+.+|++|++++|++++.. +.. ...++++.+++++|
T Consensus 153 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n 203 (319)
T cd00116 153 SCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNN 203 (319)
T ss_pred HHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCC
Confidence 2233445566777777777666321 111 22346666666666
No 25
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=98.78 E-value=4.4e-09 Score=94.17 Aligned_cols=115 Identities=23% Similarity=0.188 Sum_probs=63.3
Q ss_pred CCCCCceecCCCccCCccCh---hhhc--------------cccCCeeeccCCCCCCCCChhhhcCccC----------h
Q 038318 5 LTYLRTPHLGSNNLTSSISL---SLWN--------------VECILYIDLSSNSLSGFLPSNIEKLKVL----------V 57 (220)
Q Consensus 5 l~~L~~L~Ls~n~l~g~~p~---~~~~--------------l~~L~~L~Ls~N~l~g~~p~~~~~l~~L----------p 57 (220)
+++|+.|+|++|++++ +|. .+.. ..+|+.|+|++|+|+ .+|....++..| |
T Consensus 301 p~~L~~LdLS~N~L~~-Lp~lp~~L~~L~Ls~N~L~~LP~lp~~Lq~LdLS~N~Ls-~LP~lp~~L~~L~Ls~N~L~~LP 378 (788)
T PRK15387 301 PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPTLPSGLQELSVSDNQLA-SLPTLPSELYKLWAYNNRLTSLP 378 (788)
T ss_pred ccccceeECCCCcccc-CCCCcccccccccccCccccccccccccceEecCCCccC-CCCCCCcccceehhhccccccCc
Confidence 3677777777777774 333 1111 136788888888887 455433333333 2
Q ss_pred hhhcCCCCCCEEeccCCcccccCCcccc-----------------CCCCCCeeeccCCcccccCCCC-cccccccccccc
Q 038318 58 DCFGSLTSLEFLDISNNNLFGKIPKSFK-----------------GLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFI 119 (220)
Q Consensus 58 ~~~~~l~~L~~L~ls~N~l~~~~p~~~~-----------------~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~ 119 (220)
.. ..+|+.|++++|+++ .+|.... ...+|+.|++++|+++ .+|.. ..++.+..++++
T Consensus 379 ~l---~~~L~~LdLs~N~Lt-~LP~l~s~L~~LdLS~N~LssIP~l~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs 453 (788)
T PRK15387 379 AL---PSGLKELIVSGNRLT-SLPVLPSELKELMVSGNRLTSLPMLPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 453 (788)
T ss_pred cc---ccccceEEecCCccc-CCCCcccCCCEEEccCCcCCCCCcchhhhhhhhhccCccc-ccChHHhhccCCCeEECC
Confidence 21 124555555555554 2332110 0123455566666665 45554 567778888888
Q ss_pred cccCCCCC
Q 038318 120 WNYTLCGP 127 (220)
Q Consensus 120 ~n~~l~~~ 127 (220)
+| .+++.
T Consensus 454 ~N-~Ls~~ 460 (788)
T PRK15387 454 GN-PLSER 460 (788)
T ss_pred CC-CCCch
Confidence 88 56654
No 26
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=98.76 E-value=1.9e-08 Score=90.32 Aligned_cols=38 Identities=26% Similarity=0.375 Sum_probs=23.0
Q ss_pred CCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCCh
Q 038318 7 YLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPS 48 (220)
Q Consensus 7 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 48 (220)
+|+.|++++|+++ .+|..+. ++|+.|++++|+++ .+|.
T Consensus 263 ~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~ 300 (754)
T PRK15370 263 ALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPA 300 (754)
T ss_pred CCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcc
Confidence 4666666666666 4555443 46777777777776 3444
No 27
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.75 E-value=1.6e-09 Score=85.44 Aligned_cols=83 Identities=27% Similarity=0.258 Sum_probs=57.3
Q ss_pred CCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCccc
Q 038318 5 LTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSF 84 (220)
Q Consensus 5 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~~ 84 (220)
...|+.+|||+|.++ .+-.+..-++.++.|++|+|.+. .+. .+..+++|+.||+|+|.++ .+-.+-
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-----------nLa~L~~L~~LDLS~N~Ls-~~~Gwh 348 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-----------NLAELPQLQLLDLSGNLLA-ECVGWH 348 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-----------hhhhcccceEeecccchhH-hhhhhH
Confidence 456888999999988 77778888888999999999887 333 2456778888888888776 343333
Q ss_pred cCCCCCCeeeccCCccc
Q 038318 85 KGLSRLKQLNAAHSKLE 101 (220)
Q Consensus 85 ~~l~~L~~l~l~~n~l~ 101 (220)
.++-+.++|.++.|.+.
T Consensus 349 ~KLGNIKtL~La~N~iE 365 (490)
T KOG1259|consen 349 LKLGNIKTLKLAQNKIE 365 (490)
T ss_pred hhhcCEeeeehhhhhHh
Confidence 34444445555554443
No 28
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.74 E-value=3.2e-08 Score=93.52 Aligned_cols=104 Identities=18% Similarity=0.238 Sum_probs=55.5
Q ss_pred CCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCcccc
Q 038318 6 TYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFK 85 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 85 (220)
.+|+.|++++|++. .+|..+..+++|+.|+|+++...+.+|. ++.+++|+.|++++|.....+|..+.
T Consensus 611 ~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-----------ls~l~~Le~L~L~~c~~L~~lp~si~ 678 (1153)
T PLN03210 611 ENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-----------LSMATNLETLKLSDCSSLVELPSSIQ 678 (1153)
T ss_pred cCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-----------cccCCcccEEEecCCCCccccchhhh
Confidence 45666666666665 5566666666666666666543335553 34445555555555544445555555
Q ss_pred CCCCCCeeeccCCcccccCCCCcccccccccccccc
Q 038318 86 GLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWN 121 (220)
Q Consensus 86 ~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n 121 (220)
++++|+.|++++|..-..+|....+++|..+++++|
T Consensus 679 ~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc 714 (1153)
T PLN03210 679 YLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGC 714 (1153)
T ss_pred ccCCCCEEeCCCCCCcCccCCcCCCCCCCEEeCCCC
Confidence 555555555555433334444333444444444444
No 29
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.73 E-value=3.1e-09 Score=89.98 Aligned_cols=92 Identities=27% Similarity=0.364 Sum_probs=83.8
Q ss_pred CCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC-------------hhhhcCCCCCCEEeccC
Q 038318 7 YLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL-------------VDCFGSLTSLEFLDISN 73 (220)
Q Consensus 7 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L-------------p~~~~~l~~L~~L~ls~ 73 (220)
-|+.|-+++|+++ .+|..++.+..|..||.+.|.+. .+|..++.+.+| |+.+..|+ |..||+|.
T Consensus 144 pLkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~lp~El~~Lp-Li~lDfSc 220 (722)
T KOG0532|consen 144 PLKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLEDLPEELCSLP-LIRLDFSC 220 (722)
T ss_pred cceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhhCCHHHhCCc-eeeeeccc
Confidence 3788999999998 99999999999999999999998 889888888777 88888775 99999999
Q ss_pred CcccccCCccccCCCCCCeeeccCCcccc
Q 038318 74 NNLFGKIPKSFKGLSRLKQLNAAHSKLEE 102 (220)
Q Consensus 74 N~l~~~~p~~~~~l~~L~~l~l~~n~l~~ 102 (220)
|+++ .+|-.|.+|..|++|-|.+|.++.
T Consensus 221 Nkis-~iPv~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 221 NKIS-YLPVDFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred Ccee-ecchhhhhhhhheeeeeccCCCCC
Confidence 9999 899999999999999999999984
No 30
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=98.72 E-value=9.7e-08 Score=79.34 Aligned_cols=42 Identities=26% Similarity=0.444 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhC------CCCceEeeCCCCCceeecCCC
Q 038318 179 ISDMLNIMIDVALILEYVHHD------HSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~------~~~~i~h~dlk~~nill~~~~ 220 (220)
|....+++..+|+|++|||++ ..|+|.|||+|+.|||+..|+
T Consensus 306 w~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~Dl 353 (534)
T KOG3653|consen 306 WNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDL 353 (534)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCC
Confidence 999999999999999999986 357899999999999998774
No 31
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=98.69 E-value=5e-08 Score=87.62 Aligned_cols=107 Identities=21% Similarity=0.304 Sum_probs=73.5
Q ss_pred CCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhc-CccC----------hhhhcCCCCCCEEeccCCc
Q 038318 7 YLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEK-LKVL----------VDCFGSLTSLEFLDISNNN 75 (220)
Q Consensus 7 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-l~~L----------p~~~~~l~~L~~L~ls~N~ 75 (220)
+|+.|+|++|+++ .+|..+. ++|+.|++++|+++ .+|..+.. +..| |..+. .+|+.|++++|+
T Consensus 200 ~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~~~L~~L~Ls~N~L~~LP~~l~--s~L~~L~Ls~N~ 273 (754)
T PRK15370 200 QITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLPDTIQEMELSINRITELPERLP--SALQSLDLFHNK 273 (754)
T ss_pred CCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhhccccEEECcCCccCcCChhHh--CCCCEEECcCCc
Confidence 5788888888888 6776654 57888888888887 66764431 2222 44443 468888888888
Q ss_pred ccccCCccccCCCCCCeeeccCCcccccCCCCcccccccccccccccCCC
Q 038318 76 LFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWNYTLC 125 (220)
Q Consensus 76 l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n~~l~ 125 (220)
++ .+|..+. .+|+.|++++|++++ +|.. ....+..+++++| .+.
T Consensus 274 L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~-lp~sL~~L~Ls~N-~Lt 317 (754)
T PRK15370 274 IS-CLPENLP--EELRYLSVYDNSIRT-LPAH-LPSGITHLNVQSN-SLT 317 (754)
T ss_pred cC-ccccccC--CCCcEEECCCCcccc-Cccc-chhhHHHHHhcCC-ccc
Confidence 88 5676554 478888888888884 4542 2246777888887 444
No 32
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=98.69 E-value=3.6e-08 Score=88.43 Aligned_cols=42 Identities=29% Similarity=0.271 Sum_probs=23.5
Q ss_pred CCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcC
Q 038318 7 YLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKL 53 (220)
Q Consensus 7 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 53 (220)
+|+.|++++|+++ .+|.. +++|++|++++|+++ .+|....+|
T Consensus 223 ~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~lp~sL 264 (788)
T PRK15387 223 HITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVLPPGL 264 (788)
T ss_pred CCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCccccc
Confidence 4566666666666 45532 456666666666666 445433333
No 33
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.69 E-value=1.6e-08 Score=85.06 Aligned_cols=116 Identities=31% Similarity=0.424 Sum_probs=77.7
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhc---CccC----------hhhhcCCCCCCE
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEK---LKVL----------VDCFGSLTSLEF 68 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~---l~~L----------p~~~~~l~~L~~ 68 (220)
++.+++|+.|++++|+++ .+|...+.++.|+.|++++|+++ .+|..+.. ++.+ +..+..+.++..
T Consensus 159 ~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~ 236 (394)
T COG4886 159 LRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSG 236 (394)
T ss_pred hhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccc
Confidence 456777777777777777 66666667777777777777776 66664322 2222 555666666777
Q ss_pred EeccCCcccccCCccccCCCCCCeeeccCCcccccCCCCcccccccccccccc
Q 038318 69 LDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWN 121 (220)
Q Consensus 69 L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n 121 (220)
+.+++|++. ..+..++.++.++.|++++|+++. ++..+.+..++.+++++|
T Consensus 237 l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~-i~~~~~~~~l~~L~~s~n 287 (394)
T COG4886 237 LELSNNKLE-DLPESIGNLSNLETLDLSNNQISS-ISSLGSLTNLRELDLSGN 287 (394)
T ss_pred cccCCceee-eccchhccccccceeccccccccc-cccccccCccCEEeccCc
Confidence 777777765 345667777778888888887774 333456677777777777
No 34
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.68 E-value=1.6e-08 Score=57.48 Aligned_cols=37 Identities=27% Similarity=0.372 Sum_probs=30.9
Q ss_pred CCCCceecCCCccCCccChhhhccccCCeeeccCCCCC
Q 038318 6 TYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLS 43 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 43 (220)
++|++|++++|+++ .+|+.+.+|++|+.|++++|+++
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 57889999999998 78888899999999999999887
No 35
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.64 E-value=6e-09 Score=84.78 Aligned_cols=112 Identities=22% Similarity=0.310 Sum_probs=74.6
Q ss_pred CC-CCCCceecCCCccCCc----cChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccc
Q 038318 4 SL-TYLRTPHLGSNNLTSS----ISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFG 78 (220)
Q Consensus 4 ~l-~~L~~L~Ls~n~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~ 78 (220)
.+ ++|+.|++++|.+++. ++..+..+++|+.|++++|.+++.....+ +..+..+++|++|++++|.+++
T Consensus 134 ~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l------~~~l~~~~~L~~L~L~~n~i~~ 207 (319)
T cd00116 134 DLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRAL------AEGLKANCNLEVLDLNNNGLTD 207 (319)
T ss_pred hCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHH------HHHHHhCCCCCEEeccCCccCh
Confidence 44 7899999999999843 34456677889999999999885221111 2244556788888888887763
Q ss_pred c----CCccccCCCCCCeeeccCCcccccCCCC--c----ccccccccccccc
Q 038318 79 K----IPKSFKGLSRLKQLNAAHSKLEEEIPIE--R----PLRNILAQSFIWN 121 (220)
Q Consensus 79 ~----~p~~~~~l~~L~~l~l~~n~l~~~~p~~--~----~~~~l~~l~~~~n 121 (220)
. ++..+..+++|++|++++|++++..... . ..+.++.+++++|
T Consensus 208 ~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n 260 (319)
T cd00116 208 EGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCN 260 (319)
T ss_pred HHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCC
Confidence 3 2334556677888888888776421111 1 1257777777777
No 36
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=98.62 E-value=4.6e-08 Score=80.93 Aligned_cols=46 Identities=39% Similarity=0.595 Sum_probs=40.5
Q ss_pred cccccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 173 RCRNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 173 r~~~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
+++.-+|..++++|.++|+|++|||.. .+ |+|||+|+.|+|++.++
T Consensus 135 ~~~~l~~~~~l~~aldiArGm~YLH~~-~~-iIHrDLK~~NiLv~~~~ 180 (362)
T KOG0192|consen 135 RKRKLPLKVRLRIALDIARGMEYLHSE-GP-IIHRDLKSDNILVDLKG 180 (362)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHhcC-CC-eeecccChhhEEEcCCC
Confidence 355566999999999999999999987 44 99999999999999863
No 37
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.57 E-value=1e-08 Score=80.96 Aligned_cols=104 Identities=19% Similarity=0.157 Sum_probs=78.6
Q ss_pred CCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCcc
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKS 83 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~ 83 (220)
-+|.++.|++|+|.+. .+-. +..+++|+.||||+|.++ .+-. +-..+.+++.|.++.|.+.. -+.
T Consensus 305 L~Pkir~L~lS~N~i~-~v~n-La~L~~L~~LDLS~N~Ls-~~~G----------wh~KLGNIKtL~La~N~iE~--LSG 369 (490)
T KOG1259|consen 305 LAPKLRRLILSQNRIR-TVQN-LAELPQLQLLDLSGNLLA-ECVG----------WHLKLGNIKTLKLAQNKIET--LSG 369 (490)
T ss_pred hccceeEEecccccee-eehh-hhhcccceEeecccchhH-hhhh----------hHhhhcCEeeeehhhhhHhh--hhh
Confidence 4688999999999998 5544 888999999999999998 4332 22456788888888888752 245
Q ss_pred ccCCCCCCeeeccCCcccccCC--CCccccccccccccccc
Q 038318 84 FKGLSRLKQLNAAHSKLEEEIP--IERPLRNILAQSFIWNY 122 (220)
Q Consensus 84 ~~~l~~L~~l~l~~n~l~~~~p--~~~~~~~l~~l~~~~n~ 122 (220)
+.++-+|..||+++|++...-. ..+.++-+..+.+.+||
T Consensus 370 L~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NP 410 (490)
T KOG1259|consen 370 LRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNP 410 (490)
T ss_pred hHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCC
Confidence 6777788888898888874221 22677788888888883
No 38
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.54 E-value=4.6e-09 Score=91.32 Aligned_cols=108 Identities=24% Similarity=0.338 Sum_probs=79.8
Q ss_pred CCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCcc
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKS 83 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~ 83 (220)
-++.|+.|+|++|+++ .+- .+..++.|++|||+.|.+. .+|.- ....+ .|+.|.+++|.++ ++ ..
T Consensus 185 ll~ale~LnLshNk~~-~v~-~Lr~l~~LkhLDlsyN~L~-~vp~l---------~~~gc-~L~~L~lrnN~l~-tL-~g 249 (1096)
T KOG1859|consen 185 LLPALESLNLSHNKFT-KVD-NLRRLPKLKHLDLSYNCLR-HVPQL---------SMVGC-KLQLLNLRNNALT-TL-RG 249 (1096)
T ss_pred HHHHhhhhccchhhhh-hhH-HHHhcccccccccccchhc-ccccc---------chhhh-hheeeeecccHHH-hh-hh
Confidence 3677889999999988 443 7888899999999999988 67641 11223 3888999999887 32 34
Q ss_pred ccCCCCCCeeeccCCcccccCCCC--cccccccccccccccCCCC
Q 038318 84 FKGLSRLKQLNAAHSKLEEEIPIE--RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 84 ~~~l~~L~~l~l~~n~l~~~~p~~--~~~~~l~~l~~~~n~~l~~ 126 (220)
+.++.+|+.||+++|-+.+.-.-. ..+..|..+++.|||--|.
T Consensus 250 ie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 250 IENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred HHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 678899999999999887532211 5677888999999965553
No 39
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.45 E-value=7.3e-08 Score=81.01 Aligned_cols=115 Identities=28% Similarity=0.373 Sum_probs=61.0
Q ss_pred CCCCCCceecCCCccCCccChhhhccc-cCCeeeccCCCCCCCCChhhhcCccC-------------hhhhcCCCCCCEE
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWNVE-CILYIDLSSNSLSGFLPSNIEKLKVL-------------VDCFGSLTSLEFL 69 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L-------------p~~~~~l~~L~~L 69 (220)
.++.++.|++.+|+++ .+|+....+. +|+.|++++|++. .+|..+..+++| |...+.++.|+.|
T Consensus 114 ~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~~~L~~L 191 (394)
T COG4886 114 ELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLSDLPKLLSNLSNLNNL 191 (394)
T ss_pred cccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhhhhhhhhhhhhhhhhe
Confidence 3455666777777776 6666666563 6777777777766 554433332222 2223345556666
Q ss_pred eccCCcccccCCccccCCCCCCeeeccCCcccccCCCCcccccccccccccc
Q 038318 70 DISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWN 121 (220)
Q Consensus 70 ~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n 121 (220)
++++|+++ .+|........|+++++++|.....+.....+..+..+.+.+|
T Consensus 192 ~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n 242 (394)
T COG4886 192 DLSGNKIS-DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNN 242 (394)
T ss_pred eccCCccc-cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCc
Confidence 66666665 5555444444566666666643222222244444555555555
No 40
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=98.41 E-value=3.5e-07 Score=77.25 Aligned_cols=36 Identities=36% Similarity=0.613 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 182 MLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 182 r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
..-+|.+|..|++|||... |||||+||+|||||+||
T Consensus 176 aR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dm 211 (604)
T KOG0592|consen 176 ARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDG 211 (604)
T ss_pred HHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCC
Confidence 3457889999999999888 99999999999999986
No 41
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.39 E-value=3.2e-08 Score=69.58 Aligned_cols=101 Identities=22% Similarity=0.259 Sum_probs=59.8
Q ss_pred CCceecCCCccCCccChhhhc---cccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCccc
Q 038318 8 LRTPHLGSNNLTSSISLSLWN---VECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSF 84 (220)
Q Consensus 8 L~~L~Ls~n~l~g~~p~~~~~---l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~~ 84 (220)
+..+||+++.+- .+++.... ...|+..+|++|.+. .+|..| -...+.++.+++++|.++ .+|.++
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kf---------t~kf~t~t~lNl~~neis-dvPeE~ 96 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKF---------TIKFPTATTLNLANNEIS-DVPEEL 96 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHH---------hhccchhhhhhcchhhhh-hchHHH
Confidence 455677777764 55554433 344555677777776 666543 123345677777777776 666667
Q ss_pred cCCCCCCeeeccCCcccccCCCC-cccccccccccccc
Q 038318 85 KGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 85 ~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n 121 (220)
..++.|+.++++.|.+.- .|.- ..+.++..++..+|
T Consensus 97 Aam~aLr~lNl~~N~l~~-~p~vi~~L~~l~~Lds~~n 133 (177)
T KOG4579|consen 97 AAMPALRSLNLRFNPLNA-EPRVIAPLIKLDMLDSPEN 133 (177)
T ss_pred hhhHHhhhcccccCcccc-chHHHHHHHhHHHhcCCCC
Confidence 777777777777777663 3322 33444445554444
No 42
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.37 E-value=3.2e-08 Score=69.58 Aligned_cols=110 Identities=18% Similarity=0.197 Sum_probs=83.0
Q ss_pred CCCCCCCceecCCCccCCccChhhhc-cccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCC
Q 038318 3 GSLTYLRTPHLGSNNLTSSISLSLWN-VECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIP 81 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p~~~~~-l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p 81 (220)
.....|+..+|++|.+. .+|+.|.. .+.++.|+|++|.++ .+|++ +..++.|+.++++.|.+. ..|
T Consensus 50 ~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE----------~Aam~aLr~lNl~~N~l~-~~p 116 (177)
T KOG4579|consen 50 SKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEE----------LAAMPALRSLNLRFNPLN-AEP 116 (177)
T ss_pred hCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHH----------HhhhHHhhhcccccCccc-cch
Confidence 34567788899999998 88887765 458999999999998 88884 567889999999999998 778
Q ss_pred ccccCCCCCCeeeccCCcccccCCCCcccccccccccccccCCCC
Q 038318 82 KSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 82 ~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n~~l~~ 126 (220)
.-+..+.++-.|+..+|... .+|.....+.+..+.--+|..+.+
T Consensus 117 ~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~ 160 (177)
T KOG4579|consen 117 RVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGD 160 (177)
T ss_pred HHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccc
Confidence 88888999999999999887 555542233333332224434443
No 43
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.28 E-value=3.1e-07 Score=77.76 Aligned_cols=105 Identities=23% Similarity=0.218 Sum_probs=74.7
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIP 81 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p 81 (220)
+..+++|+.|++.+|++. .+...+..+++|++|++++|.|+...+ +..++.|+.|++++|.++. +
T Consensus 91 l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~~------------l~~l~~L~~L~l~~N~i~~-~- 155 (414)
T KOG0531|consen 91 LSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLEG------------LSTLTLLKELNLSGNLISD-I- 155 (414)
T ss_pred cccccceeeeeccccchh-hcccchhhhhcchheeccccccccccc------------hhhccchhhheeccCcchh-c-
Confidence 456788999999999998 555547789999999999999984332 4556668888888888762 2
Q ss_pred ccccCCCCCCeeeccCCcccccCCC-Ccccccccccccccc
Q 038318 82 KSFKGLSRLKQLNAAHSKLEEEIPI-ERPLRNILAQSFIWN 121 (220)
Q Consensus 82 ~~~~~l~~L~~l~l~~n~l~~~~p~-~~~~~~l~~l~~~~n 121 (220)
..+..+..|+.+++++|.+...-+. ...+..+..+.+.+|
T Consensus 156 ~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n 196 (414)
T KOG0531|consen 156 SGLESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGN 196 (414)
T ss_pred cCCccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCC
Confidence 3455577788888888887754431 234556666666666
No 44
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.28 E-value=6.2e-07 Score=50.88 Aligned_cols=36 Identities=33% Similarity=0.577 Sum_probs=16.4
Q ss_pred CCCEEeccCCcccccCCccccCCCCCCeeeccCCccc
Q 038318 65 SLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLE 101 (220)
Q Consensus 65 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~ 101 (220)
+|++|++++|+++ .+|..+.++++|+.|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 3444555555444 33434445555555555555444
No 45
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.28 E-value=1.1e-06 Score=75.46 Aligned_cols=51 Identities=27% Similarity=0.378 Sum_probs=41.8
Q ss_pred HhhhhcccccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 168 ILFCIRCRNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 168 ~~~~~r~~~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-|++|.++.......+++.+|.+||.|||++ .|||+|||+|..||+++++
T Consensus 131 r~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~ 181 (632)
T KOG0584|consen 131 REYRKKHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGN 181 (632)
T ss_pred HHHHHHhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCC
Confidence 33444444555667788999999999999998 8999999999999999764
No 46
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.28 E-value=8.5e-07 Score=74.01 Aligned_cols=39 Identities=33% Similarity=0.558 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
..+..++..++..||+|||.+. |+||||||+|+|+++++
T Consensus 209 ~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 209 EQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDG 247 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCC
Confidence 4567889999999999999998 99999999999998864
No 47
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=98.27 E-value=1.1e-06 Score=71.00 Aligned_cols=36 Identities=36% Similarity=0.608 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 182 MLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 182 r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
..-++.+++.|++|||+.. |+|||+||+|||||+++
T Consensus 127 arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~G 162 (357)
T KOG0598|consen 127 ARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQG 162 (357)
T ss_pred HHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCC
Confidence 3445788999999999998 99999999999999875
No 48
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=98.25 E-value=1.4e-06 Score=68.68 Aligned_cols=49 Identities=27% Similarity=0.415 Sum_probs=40.0
Q ss_pred hhhhcccccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 169 LFCIRCRNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 169 ~~~~r~~~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
-+.|+.++.+-+...-+|.++..|++|+|+.. |++||+||+|||+|..+
T Consensus 133 S~Lrk~~rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G 181 (355)
T KOG0616|consen 133 SYLRKSGRFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNG 181 (355)
T ss_pred HHHHhcCCCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCC
Confidence 34455555555666778999999999999988 99999999999999764
No 49
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=98.18 E-value=1.3e-06 Score=70.71 Aligned_cols=38 Identities=29% Similarity=0.514 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 180 ~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..--+++.++.+||.|||+. ..|+|||+||+|+|++..
T Consensus 178 ~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNsk 215 (364)
T KOG0581|consen 178 PVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSK 215 (364)
T ss_pred HHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccC
Confidence 45678999999999999962 349999999999999865
No 50
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=98.18 E-value=2.2e-06 Score=75.86 Aligned_cols=43 Identities=26% Similarity=0.376 Sum_probs=38.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
-+-...++|+.++++|+.+||.. .|||||||||.+|+||+.++
T Consensus 141 lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g 183 (738)
T KOG1989|consen 141 LTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADG 183 (738)
T ss_pred CChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCC
Confidence 34668899999999999999987 89999999999999998763
No 51
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.16 E-value=1.4e-07 Score=82.42 Aligned_cols=99 Identities=24% Similarity=0.326 Sum_probs=80.6
Q ss_pred CCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCcc-cc
Q 038318 7 YLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKS-FK 85 (220)
Q Consensus 7 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~-~~ 85 (220)
.|.+.+.++|++. .+-.++.-++.|+.|||++|+++ ... .+..++.|++||+++|++. .+|.- ..
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~-~v~-----------~Lr~l~~LkhLDlsyN~L~-~vp~l~~~ 230 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFT-KVD-----------NLRRLPKLKHLDLSYNCLR-HVPQLSMV 230 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhh-hhH-----------HHHhcccccccccccchhc-cccccchh
Confidence 4677889999998 78888999999999999999998 332 3678899999999999998 56642 22
Q ss_pred CCCCCCeeeccCCcccccCCCCcccccccccccccc
Q 038318 86 GLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWN 121 (220)
Q Consensus 86 ~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n 121 (220)
.+ .|..|.+++|.++. +-....+++|..+|++.|
T Consensus 231 gc-~L~~L~lrnN~l~t-L~gie~LksL~~LDlsyN 264 (1096)
T KOG1859|consen 231 GC-KLQLLNLRNNALTT-LRGIENLKSLYGLDLSYN 264 (1096)
T ss_pred hh-hheeeeecccHHHh-hhhHHhhhhhhccchhHh
Confidence 33 49999999999873 433368899999999999
No 52
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=98.11 E-value=2e-06 Score=64.73 Aligned_cols=38 Identities=34% Similarity=0.538 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 181 DMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 181 ~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
--=+||.++..|++|||+ ...++|||+||+|||++.++
T Consensus 149 vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~G 186 (282)
T KOG0984|consen 149 VLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDG 186 (282)
T ss_pred HhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCC
Confidence 345889999999999998 45699999999999998764
No 53
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.10 E-value=1.3e-06 Score=79.88 Aligned_cols=83 Identities=30% Similarity=0.448 Sum_probs=41.1
Q ss_pred CCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCcc
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKS 83 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~ 83 (220)
.++.|++|||++|.=-+.+|.++++|-+|++|++++..++ .+|. .++.|..|.+||+..+.-...+|..
T Consensus 569 ~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~----------~l~~Lk~L~~Lnl~~~~~l~~~~~i 637 (889)
T KOG4658|consen 569 SLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPS----------GLGNLKKLIYLNLEVTGRLESIPGI 637 (889)
T ss_pred hCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccch----------HHHHHHhhheeccccccccccccch
Confidence 3455555555544433455555555555555555555544 4444 3344445555555555433334444
Q ss_pred ccCCCCCCeeeccC
Q 038318 84 FKGLSRLKQLNAAH 97 (220)
Q Consensus 84 ~~~l~~L~~l~l~~ 97 (220)
...+.+|++|.+..
T Consensus 638 ~~~L~~Lr~L~l~~ 651 (889)
T KOG4658|consen 638 LLELQSLRVLRLPR 651 (889)
T ss_pred hhhcccccEEEeec
Confidence 44455555555543
No 54
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=98.10 E-value=4.2e-06 Score=68.73 Aligned_cols=39 Identities=31% Similarity=0.514 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 172 ~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~ 210 (338)
T cd05102 172 TMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSEN 210 (338)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCC
Confidence 37788999999999999999876 9999999999999865
No 55
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=98.09 E-value=3.7e-06 Score=67.58 Aligned_cols=37 Identities=30% Similarity=0.468 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 181 DMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 181 ~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
....+..|+.+|++|+|+.. |+|||+||.|+++++++
T Consensus 121 ~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G 157 (323)
T KOG0594|consen 121 LIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSG 157 (323)
T ss_pred HHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCC
Confidence 45778899999999999998 99999999999998753
No 56
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=98.06 E-value=2.6e-06 Score=72.99 Aligned_cols=38 Identities=29% Similarity=0.651 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+...||.+||+|+.|||... |||||+|+.||+|+++
T Consensus 487 m~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~ 524 (678)
T KOG0193|consen 487 MNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHED 524 (678)
T ss_pred HHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccC
Confidence 4566889999999999999998 9999999999999986
No 57
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.05 E-value=3.2e-05 Score=64.28 Aligned_cols=41 Identities=32% Similarity=0.485 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHHHhh-----CCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHH-----DHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~-----~~~~~i~h~dlk~~nill~~~ 219 (220)
-...++++.++|.||++||. +..|.|.|||+|+.|||+..+
T Consensus 307 ~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn 352 (513)
T KOG2052|consen 307 TEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN 352 (513)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccC
Confidence 34568999999999999996 468999999999999999765
No 58
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.05 E-value=8e-07 Score=73.41 Aligned_cols=40 Identities=25% Similarity=0.216 Sum_probs=27.4
Q ss_pred CCCCCCceecCCCccCCccC--hhhhccccCCeeeccCCCCC
Q 038318 4 SLTYLRTPHLGSNNLTSSIS--LSLWNVECILYIDLSSNSLS 43 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p--~~~~~l~~L~~L~Ls~N~l~ 43 (220)
.|++++.||||.|-+...-| .-...|++|+.|+|+.|.+.
T Consensus 144 ~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~ 185 (505)
T KOG3207|consen 144 ILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLS 185 (505)
T ss_pred hCCcceeecchhhhHHhHHHHHHHHHhcccchhccccccccc
Confidence 56777788888877774332 23456777888888877775
No 59
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.03 E-value=2.8e-06 Score=77.85 Aligned_cols=106 Identities=29% Similarity=0.345 Sum_probs=84.4
Q ss_pred CCCCCCceecCCCc--cCCccChh-hhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccC
Q 038318 4 SLTYLRTPHLGSNN--LTSSISLS-LWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKI 80 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~--l~g~~p~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~ 80 (220)
+.+.|++|-+..|. +. .++.. |..++.|++|||++|.=-+.+|. .++.|-+|++|++++..++ .+
T Consensus 543 ~~~~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~----------~I~~Li~LryL~L~~t~I~-~L 610 (889)
T KOG4658|consen 543 ENPKLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPS----------SIGELVHLRYLDLSDTGIS-HL 610 (889)
T ss_pred CCCccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCCh----------HHhhhhhhhcccccCCCcc-cc
Confidence 34578899999986 54 55544 77799999999999876667777 5677889999999999998 89
Q ss_pred CccccCCCCCCeeeccCCcccccCCCC-cccccccccccccc
Q 038318 81 PKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 81 p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n 121 (220)
|..+.++..|.+||+..+.-...+|.. ..+++|+++.+...
T Consensus 611 P~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 611 PSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred chHHHHHHhhheeccccccccccccchhhhcccccEEEeecc
Confidence 999999999999999988765555554 45778888776544
No 60
>PHA02882 putative serine/threonine kinase; Provisional
Probab=98.01 E-value=6.6e-06 Score=66.33 Aligned_cols=39 Identities=44% Similarity=0.711 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 124 ~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~ 162 (294)
T PHA02882 124 NKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGN 162 (294)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCC
Confidence 36677889999999999999876 9999999999999865
No 61
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=97.99 E-value=9.7e-06 Score=64.64 Aligned_cols=40 Identities=20% Similarity=0.370 Sum_probs=35.7
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
+-.|..+..++.++++|++|+|+.. ++|||+||+||++++
T Consensus 113 ~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~ 152 (274)
T cd05076 113 RVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLAR 152 (274)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEec
Confidence 3458888999999999999999876 999999999999974
No 62
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=97.99 E-value=5.3e-06 Score=67.08 Aligned_cols=34 Identities=29% Similarity=0.497 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 183 LNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 183 ~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-+..|+.+|+.|||... |+|||+||.|+|+|.+
T Consensus 128 KLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~ 161 (364)
T KOG0658|consen 128 KLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPD 161 (364)
T ss_pred HHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCC
Confidence 346788999999999876 9999999999999976
No 63
>PHA03212 serine/threonine kinase US3; Provisional
Probab=97.98 E-value=9.9e-06 Score=68.17 Aligned_cols=41 Identities=34% Similarity=0.629 Sum_probs=36.5
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...+.....++.+++.|+.|+|... |+|||+||+||+++.+
T Consensus 178 ~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~ 218 (391)
T PHA03212 178 NIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHP 218 (391)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCC
Confidence 3447888999999999999999887 9999999999999865
No 64
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=97.96 E-value=1.4e-05 Score=63.30 Aligned_cols=40 Identities=20% Similarity=0.334 Sum_probs=35.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-++..+.+++.+++.|++|+|... ++|||+||.||+++.+
T Consensus 102 ~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~ 141 (262)
T cd05077 102 LTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLARE 141 (262)
T ss_pred CCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecC
Confidence 458888999999999999999876 9999999999999753
No 65
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=97.96 E-value=2e-05 Score=64.47 Aligned_cols=41 Identities=22% Similarity=0.343 Sum_probs=35.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhh-CCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHH-DHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~-~~~~~i~h~dlk~~nill~~~ 219 (220)
...+.....++.+++.|+.|+|. .. ++|||+||+||+++.+
T Consensus 91 ~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~ 132 (325)
T cd05594 91 VFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKD 132 (325)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCC
Confidence 34577888999999999999996 45 9999999999999875
No 66
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=97.96 E-value=8.9e-06 Score=65.74 Aligned_cols=39 Identities=31% Similarity=0.518 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|....+++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 136 ~~~~~~~i~~~i~~al~~lH~~~---ivH~dlkp~Nill~~~ 174 (304)
T cd05096 136 SYSSLLHVALQIASGMKYLSSLN---FVHRDLATRNCLVGEN 174 (304)
T ss_pred cHHHHHHHHHHHHHHHHHHHHCC---ccccCcchhheEEcCC
Confidence 37888999999999999999877 9999999999999875
No 67
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=97.94 E-value=9.5e-06 Score=64.98 Aligned_cols=39 Identities=31% Similarity=0.595 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 108 ~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~ 146 (290)
T cd07862 108 PTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSS 146 (290)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCC
Confidence 47788999999999999999887 9999999999999865
No 68
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=97.94 E-value=1.6e-05 Score=63.27 Aligned_cols=38 Identities=26% Similarity=0.538 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-....++..++++|+.|.|... ++|||+||+|||+..+
T Consensus 100 ~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~ 137 (396)
T KOG0593|consen 100 SELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQN 137 (396)
T ss_pred HHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecC
Confidence 4456788999999999999988 9999999999999754
No 69
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=97.93 E-value=1.2e-05 Score=65.37 Aligned_cols=40 Identities=25% Similarity=0.423 Sum_probs=35.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|...+.++.+++.|++|||... ++|||+||+||+++.+
T Consensus 106 ~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~ 145 (316)
T cd05108 106 IGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTP 145 (316)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCC
Confidence 347788899999999999999876 9999999999999865
No 70
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=97.93 E-value=1.5e-05 Score=65.44 Aligned_cols=40 Identities=23% Similarity=0.370 Sum_probs=36.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 92 l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~ 131 (328)
T cd05593 92 FSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKD 131 (328)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCC
Confidence 447788889999999999999887 9999999999999865
No 71
>PHA03211 serine/threonine kinase US3; Provisional
Probab=97.93 E-value=1.1e-05 Score=69.40 Aligned_cols=41 Identities=17% Similarity=0.492 Sum_probs=37.3
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+|..+..++.+++.||.|+|... |+|||+||+||+++.+
T Consensus 256 ~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~ 296 (461)
T PHA03211 256 PLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGP 296 (461)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCC
Confidence 3458999999999999999999887 9999999999999864
No 72
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=97.92 E-value=1.4e-05 Score=65.88 Aligned_cols=39 Identities=31% Similarity=0.539 Sum_probs=36.1
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|..+.+++.+++.|++|+|... ++|||+||+||+++++
T Consensus 171 ~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~ 209 (337)
T cd05054 171 TLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSEN 209 (337)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCC
Confidence 48899999999999999999876 9999999999999865
No 73
>PHA03209 serine/threonine kinase US3; Provisional
Probab=97.92 E-value=1.3e-05 Score=66.47 Aligned_cols=41 Identities=29% Similarity=0.459 Sum_probs=37.0
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...|..+..++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 153 ~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~ 193 (357)
T PHA03209 153 PLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDV 193 (357)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCC
Confidence 3458899999999999999999887 9999999999999764
No 74
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=97.92 E-value=2e-05 Score=62.91 Aligned_cols=41 Identities=27% Similarity=0.451 Sum_probs=37.1
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-+|.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 105 ~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~ 145 (279)
T cd05111 105 SLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSD 145 (279)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCC
Confidence 3458899999999999999999876 9999999999999875
No 75
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=97.91 E-value=1.9e-05 Score=64.87 Aligned_cols=41 Identities=29% Similarity=0.547 Sum_probs=34.7
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+-.-.....+..++|.|+++||... |+|||+||.||||...
T Consensus 105 ~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~ 145 (429)
T KOG0595|consen 105 RLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTT 145 (429)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccC
Confidence 3334566778899999999999998 9999999999999753
No 76
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=97.91 E-value=1.2e-05 Score=64.36 Aligned_cols=40 Identities=28% Similarity=0.415 Sum_probs=36.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|++|+|+.. ++|||+||+||+++++
T Consensus 99 ~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~ 138 (285)
T cd05631 99 FDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDR 138 (285)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCC
Confidence 347788999999999999999877 9999999999999865
No 77
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=97.91 E-value=1.6e-05 Score=62.45 Aligned_cols=40 Identities=23% Similarity=0.363 Sum_probs=35.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+..+..++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 98 ~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~ 137 (259)
T cd05037 98 VSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARY 137 (259)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecC
Confidence 347788999999999999999876 9999999999999865
No 78
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=97.91 E-value=1.1e-05 Score=66.08 Aligned_cols=41 Identities=27% Similarity=0.470 Sum_probs=36.9
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.|.....++.+++.|+.|+|+.. ++|||+||+||+++++
T Consensus 99 ~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~ 139 (338)
T cd07859 99 DLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANAD 139 (338)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCC
Confidence 3458888999999999999999887 9999999999999875
No 79
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=97.91 E-value=1.8e-05 Score=64.75 Aligned_cols=41 Identities=22% Similarity=0.322 Sum_probs=36.5
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 91 ~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~ 131 (323)
T cd05595 91 VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKD 131 (323)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCC
Confidence 3457788899999999999999887 9999999999999865
No 80
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=97.90 E-value=1.8e-05 Score=64.69 Aligned_cols=40 Identities=23% Similarity=0.303 Sum_probs=35.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 92 ~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~ 131 (323)
T cd05571 92 FSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKD 131 (323)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCC
Confidence 347778889999999999999887 9999999999999865
No 81
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=97.90 E-value=3.9e-06 Score=71.14 Aligned_cols=103 Identities=25% Similarity=0.318 Sum_probs=80.6
Q ss_pred CCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCcc
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKS 83 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~ 83 (220)
.+..++.++++.|.+. .+-..+..+++|..|++.+|++. .+.. .+..+++|++|++++|.++... .
T Consensus 70 ~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~-~i~~----------~l~~~~~L~~L~ls~N~I~~i~--~ 135 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIE-KIEN----------LLSSLVNLQVLDLSFNKITKLE--G 135 (414)
T ss_pred HhHhHHhhccchhhhh-hhhcccccccceeeeeccccchh-hccc----------chhhhhcchheecccccccccc--c
Confidence 3566777888999887 44445788999999999999998 4432 1466889999999999998443 3
Q ss_pred ccCCCCCCeeeccCCcccccCCCCcccccccccccccc
Q 038318 84 FKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWN 121 (220)
Q Consensus 84 ~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n 121 (220)
+..++.|+.|++++|.++. +.....+..+..+++++|
T Consensus 136 l~~l~~L~~L~l~~N~i~~-~~~~~~l~~L~~l~l~~n 172 (414)
T KOG0531|consen 136 LSTLTLLKELNLSGNLISD-ISGLESLKSLKLLDLSYN 172 (414)
T ss_pred hhhccchhhheeccCcchh-ccCCccchhhhcccCCcc
Confidence 6677889999999999984 555455788888888888
No 82
>PTZ00284 protein kinase; Provisional
Probab=97.90 E-value=1.6e-05 Score=68.44 Aligned_cols=41 Identities=29% Similarity=0.631 Sum_probs=34.8
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|.....++.+++.|++|||.. ..|+||||||+||+++.+
T Consensus 228 l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~ 268 (467)
T PTZ00284 228 FSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETS 268 (467)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecC
Confidence 34778889999999999999973 239999999999999753
No 83
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=97.89 E-value=1.2e-05 Score=66.11 Aligned_cols=36 Identities=42% Similarity=0.528 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 182 MLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 182 r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
..-+|.++..||+|||... |++||+||+|||+.+++
T Consensus 181 aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredG 216 (459)
T KOG0610|consen 181 ARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDG 216 (459)
T ss_pred HHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCC
Confidence 3446788899999999887 99999999999998875
No 84
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=97.88 E-value=1.4e-05 Score=66.64 Aligned_cols=39 Identities=31% Similarity=0.390 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
-++..-+|.+|+.||++||.+. |++||+||+|||||+++
T Consensus 286 e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~G 324 (591)
T KOG0986|consen 286 EQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHG 324 (591)
T ss_pred hHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCC
Confidence 4455667999999999999988 99999999999999875
No 85
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=97.88 E-value=1.6e-05 Score=62.96 Aligned_cols=39 Identities=28% Similarity=0.514 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+|.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 110 ~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~ 148 (272)
T cd05075 110 PTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNEN 148 (272)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCC
Confidence 48888999999999999999876 9999999999999865
No 86
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=97.88 E-value=2.1e-05 Score=64.48 Aligned_cols=41 Identities=32% Similarity=0.434 Sum_probs=35.9
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+..+.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 92 ~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~ 132 (330)
T cd05586 92 RFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDAT 132 (330)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCC
Confidence 3446777889999999999999887 9999999999999865
No 87
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=97.88 E-value=1.9e-05 Score=64.40 Aligned_cols=41 Identities=29% Similarity=0.387 Sum_probs=36.5
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 92 ~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~ 132 (321)
T cd05591 92 KFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAE 132 (321)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCC
Confidence 3447788889999999999999887 9999999999999875
No 88
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=97.88 E-value=1.1e-05 Score=63.41 Aligned_cols=39 Identities=44% Similarity=0.681 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
-....+|..++..|++|+|... |+|||+||+|||+|+++
T Consensus 122 EK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~ 160 (411)
T KOG0599|consen 122 EKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNM 160 (411)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeecccc
Confidence 3455678889999999999988 99999999999999863
No 89
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=97.88 E-value=2.1e-05 Score=64.25 Aligned_cols=40 Identities=23% Similarity=0.365 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 98 ~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~ 137 (323)
T cd05616 98 FKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSE 137 (323)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCC
Confidence 347788899999999999999877 9999999999999876
No 90
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=97.88 E-value=1.6e-05 Score=63.00 Aligned_cols=38 Identities=21% Similarity=0.323 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
|.....++.+++.|++|+|+.. ++|||+||+||+++++
T Consensus 99 ~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~ 136 (269)
T cd05042 99 KDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTAD 136 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCC
Confidence 6677889999999999999876 9999999999999875
No 91
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=97.88 E-value=1.5e-05 Score=65.20 Aligned_cols=40 Identities=23% Similarity=0.364 Sum_probs=36.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 98 ~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~ 137 (324)
T cd05587 98 FKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAE 137 (324)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCC
Confidence 347788889999999999999877 9999999999999865
No 92
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=97.87 E-value=2.2e-05 Score=65.31 Aligned_cols=40 Identities=25% Similarity=0.495 Sum_probs=35.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|++|+|... |+|||+||+||+++.+
T Consensus 98 l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~ 137 (363)
T cd05628 98 LTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSK 137 (363)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCC
Confidence 347778889999999999999877 9999999999999875
No 93
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=97.87 E-value=2.2e-05 Score=63.79 Aligned_cols=41 Identities=29% Similarity=0.391 Sum_probs=36.4
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+..+.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 89 ~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~ 129 (312)
T cd05585 89 RFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQ 129 (312)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCC
Confidence 3457788889999999999999877 9999999999999865
No 94
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=97.86 E-value=2.1e-05 Score=62.35 Aligned_cols=40 Identities=15% Similarity=0.321 Sum_probs=36.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.|.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 104 l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~ 143 (266)
T cd05064 104 LVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSD 143 (266)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCC
Confidence 358899999999999999999877 9999999999999875
No 95
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=97.86 E-value=2.7e-05 Score=61.39 Aligned_cols=40 Identities=23% Similarity=0.343 Sum_probs=36.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+|..+.+++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 97 ~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~ 136 (258)
T cd05078 97 INISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIRE 136 (258)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecc
Confidence 458888999999999999999877 9999999999999754
No 96
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=97.86 E-value=2.1e-05 Score=65.80 Aligned_cols=39 Identities=21% Similarity=0.494 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|....+++.+++.|++|+|+.. ++|||+||+||+++++
T Consensus 210 ~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~ 248 (374)
T cd05106 210 DLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDG 248 (374)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCC
Confidence 37888999999999999999876 9999999999999864
No 97
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.85 E-value=1.8e-05 Score=65.74 Aligned_cols=38 Identities=34% Similarity=0.607 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 180 ~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
.....|..++.+||.|+|+.. .||||+|+.|||+|.++
T Consensus 126 ~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG 163 (516)
T KOG0582|consen 126 ASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDG 163 (516)
T ss_pred HHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCC
Confidence 355677889999999999988 99999999999999875
No 98
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=97.84 E-value=2.6e-05 Score=63.58 Aligned_cols=40 Identities=20% Similarity=0.376 Sum_probs=35.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 93 ~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~ 132 (316)
T cd05620 93 FDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRD 132 (316)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCC
Confidence 347778889999999999999877 9999999999999875
No 99
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=97.84 E-value=2.3e-05 Score=64.11 Aligned_cols=39 Identities=31% Similarity=0.450 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|.....++.+++.|+.|+|+.. ++|||+||+||+++.+
T Consensus 99 ~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~ 137 (327)
T cd08227 99 SELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVD 137 (327)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecC
Confidence 47788899999999999999887 9999999999999764
No 100
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=97.84 E-value=1.5e-05 Score=63.93 Aligned_cols=39 Identities=33% Similarity=0.614 Sum_probs=35.2
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|++|+|+.. ++|||+||+||+++++
T Consensus 101 ~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~ 139 (288)
T cd07871 101 SMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEK 139 (288)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCC
Confidence 46778889999999999999877 9999999999999865
No 101
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=97.83 E-value=2.6e-05 Score=62.13 Aligned_cols=40 Identities=28% Similarity=0.460 Sum_probs=36.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|+.. ++|||+||+||+++.+
T Consensus 106 ~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~ 145 (279)
T cd05109 106 IGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSP 145 (279)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCC
Confidence 358888999999999999999876 9999999999999764
No 102
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=97.83 E-value=2.7e-05 Score=63.66 Aligned_cols=40 Identities=33% Similarity=0.420 Sum_probs=35.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 93 ~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~ 132 (325)
T cd05604 93 FPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQ 132 (325)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCC
Confidence 346777889999999999999877 9999999999999875
No 103
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=97.83 E-value=1.8e-05 Score=64.66 Aligned_cols=41 Identities=20% Similarity=0.348 Sum_probs=36.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 97 ~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~ 137 (323)
T cd05615 97 KFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSE 137 (323)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCC
Confidence 3457888999999999999999887 9999999999999875
No 104
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=97.83 E-value=2.8e-05 Score=62.43 Aligned_cols=39 Identities=36% Similarity=0.549 Sum_probs=36.3
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+|..+.+++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 121 ~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 121 GLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGAN 159 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccC
Confidence 48899999999999999999887 9999999999999865
No 105
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=97.83 E-value=2.9e-05 Score=63.43 Aligned_cols=40 Identities=30% Similarity=0.416 Sum_probs=35.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 93 ~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~ 132 (323)
T cd05575 93 FPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQ 132 (323)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCC
Confidence 346677789999999999999887 9999999999999875
No 106
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=97.83 E-value=2.6e-05 Score=63.88 Aligned_cols=40 Identities=28% Similarity=0.314 Sum_probs=35.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 102 ~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~ 141 (332)
T cd05614 102 FSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSE 141 (332)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCC
Confidence 346777888999999999999887 9999999999999875
No 107
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=97.83 E-value=2.6e-05 Score=63.84 Aligned_cols=41 Identities=22% Similarity=0.394 Sum_probs=36.6
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.+..+..++.+++.|++|+|+.. ++|||+||+||+++++
T Consensus 92 ~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~ 132 (327)
T cd05617 92 KLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDAD 132 (327)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCC
Confidence 3447788899999999999999887 9999999999999875
No 108
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.82 E-value=2.8e-05 Score=62.80 Aligned_cols=39 Identities=31% Similarity=0.527 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 135 ~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nili~~~ 173 (304)
T cd05101 135 TFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVLVTEN 173 (304)
T ss_pred cHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEEEcCC
Confidence 37888999999999999999876 9999999999999864
No 109
>PHA03207 serine/threonine kinase US3; Provisional
Probab=97.82 E-value=2.3e-05 Score=65.92 Aligned_cols=42 Identities=26% Similarity=0.455 Sum_probs=37.5
Q ss_pred cccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 175 RNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 175 ~~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..-.|..+..++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 180 ~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~ 221 (392)
T PHA03207 180 GPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEP 221 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCC
Confidence 34458899999999999999999887 9999999999999865
No 110
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=97.81 E-value=2.7e-05 Score=62.70 Aligned_cols=39 Identities=31% Similarity=0.554 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 117 ~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~ 155 (297)
T cd05089 117 TSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGEN 155 (297)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCC
Confidence 37788999999999999999876 9999999999999865
No 111
>PTZ00036 glycogen synthase kinase; Provisional
Probab=97.80 E-value=2.3e-05 Score=66.96 Aligned_cols=40 Identities=33% Similarity=0.477 Sum_probs=35.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|||... |+|||+||+||+++.+
T Consensus 167 l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~ 206 (440)
T PTZ00036 167 LPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPN 206 (440)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCC
Confidence 346777889999999999999887 9999999999999754
No 112
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=97.80 E-value=3e-05 Score=62.85 Aligned_cols=37 Identities=35% Similarity=0.576 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
-.....++.++.+||.|+|+.. ++|||+|++|||++.
T Consensus 116 E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~ 152 (313)
T KOG0198|consen 116 EPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDP 152 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeC
Confidence 4566778899999999999887 999999999999987
No 113
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=97.80 E-value=2.8e-05 Score=65.03 Aligned_cols=40 Identities=25% Similarity=0.429 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-+|....+++.+++.|+.|+|+.. ++|||+||+||+++++
T Consensus 211 l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~ 250 (375)
T cd05104 211 LDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHG 250 (375)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECC
Confidence 348899999999999999999876 9999999999999864
No 114
>PLN00181 protein SPA1-RELATED; Provisional
Probab=97.80 E-value=2.5e-05 Score=71.56 Aligned_cols=39 Identities=10% Similarity=0.315 Sum_probs=35.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
..+.....++.++++|++|+|... |+|||+||+|||++.
T Consensus 77 ~~~~~~~~i~~qi~~al~~lH~~g---IvHrDlKP~NiLl~~ 115 (793)
T PLN00181 77 VDAFECFHVFRQIVEIVNAAHSQG---IVVHNVRPSCFVMSS 115 (793)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCC---eeeccCCchhEEEcc
Confidence 347788999999999999999887 999999999999953
No 115
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=97.80 E-value=3.4e-05 Score=63.27 Aligned_cols=41 Identities=27% Similarity=0.416 Sum_probs=36.3
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+-.+.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 92 ~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~ 132 (329)
T cd05618 92 KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSE 132 (329)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCC
Confidence 3447778889999999999999887 9999999999999875
No 116
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=97.79 E-value=3.6e-05 Score=62.82 Aligned_cols=38 Identities=32% Similarity=0.466 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
......++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 95 ~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~ 132 (321)
T cd05603 95 EPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQ 132 (321)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCC
Confidence 4556678999999999999877 9999999999999875
No 117
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=97.79 E-value=3.1e-05 Score=63.75 Aligned_cols=40 Identities=25% Similarity=0.486 Sum_probs=36.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 115 l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~ 154 (343)
T cd07878 115 LSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNED 154 (343)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCC
Confidence 447788899999999999999887 9999999999999875
No 118
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=97.78 E-value=3.8e-05 Score=62.74 Aligned_cols=40 Identities=23% Similarity=0.351 Sum_probs=35.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 93 l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~ 132 (320)
T cd05590 93 FDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHE 132 (320)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCC
Confidence 446777889999999999999877 9999999999999875
No 119
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=97.78 E-value=3.3e-05 Score=61.65 Aligned_cols=40 Identities=28% Similarity=0.562 Sum_probs=36.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-+|..+..++.+++.|++|+|+.. ++|||+||+||+++++
T Consensus 104 l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~ 143 (283)
T cd05080 104 LNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDND 143 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCC
Confidence 458899999999999999999887 9999999999999865
No 120
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=97.78 E-value=4e-05 Score=60.50 Aligned_cols=40 Identities=28% Similarity=0.490 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 101 l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~ 140 (263)
T cd05052 101 VNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGEN 140 (263)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCC
Confidence 348888999999999999999877 9999999999999765
No 121
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=97.78 E-value=2.8e-05 Score=61.85 Aligned_cols=39 Identities=23% Similarity=0.479 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|.....++.+++.|++|+|... ++|+|+||+||+++++
T Consensus 117 ~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~ 155 (277)
T cd05062 117 SLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 155 (277)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCC
Confidence 37788999999999999999876 9999999999999875
No 122
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=97.78 E-value=3.9e-05 Score=61.71 Aligned_cols=40 Identities=38% Similarity=0.533 Sum_probs=35.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|+.. ++|||+||+||+++++
T Consensus 98 ~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~ 137 (291)
T cd05612 98 FSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKE 137 (291)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCC
Confidence 346777889999999999999887 9999999999999865
No 123
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=97.78 E-value=2.6e-05 Score=65.08 Aligned_cols=38 Identities=32% Similarity=0.479 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
......++.+++.|++|+|... ++|||+||+||+++++
T Consensus 141 ~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~ 178 (370)
T cd05621 141 EKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKH 178 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCC
Confidence 5566778899999999999887 9999999999999875
No 124
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=97.77 E-value=3.7e-05 Score=63.38 Aligned_cols=39 Identities=31% Similarity=0.517 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+|.+...++.+++.|++|+|+.. ++|||+||+||+++++
T Consensus 177 ~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~ 215 (343)
T cd05103 177 TLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEN 215 (343)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCC
Confidence 48889999999999999999876 9999999999999864
No 125
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=97.77 E-value=4.1e-05 Score=62.45 Aligned_cols=41 Identities=27% Similarity=0.400 Sum_probs=36.4
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 92 ~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~ 132 (316)
T cd05619 92 KFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTD 132 (316)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCC
Confidence 3447788889999999999999877 9999999999999865
No 126
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.76 E-value=2.7e-05 Score=64.94 Aligned_cols=37 Identities=35% Similarity=0.600 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 180 ~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.....++.|++.|++|+|... |+|||+|++|+++|++
T Consensus 120 ~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~ 156 (370)
T KOG0583|consen 120 DEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGN 156 (370)
T ss_pred HHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCC
Confidence 567788999999999999988 9999999999999986
No 127
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=97.76 E-value=4e-05 Score=61.42 Aligned_cols=39 Identities=38% Similarity=0.547 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|.....++.+++.|++|+|+.. ++|||+||+||+++++
T Consensus 118 ~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~ 156 (288)
T cd05093 118 TQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGEN 156 (288)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccC
Confidence 48889999999999999999877 9999999999999865
No 128
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=97.76 E-value=2.4e-05 Score=64.72 Aligned_cols=39 Identities=23% Similarity=0.459 Sum_probs=35.1
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 117 ~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~ 155 (355)
T cd07874 117 DHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSD 155 (355)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCC
Confidence 36777889999999999999877 9999999999999865
No 129
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=97.76 E-value=4.4e-05 Score=60.57 Aligned_cols=39 Identities=33% Similarity=0.586 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 110 ~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~ 148 (270)
T cd05047 110 SSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGEN 148 (270)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCC
Confidence 37888999999999999999876 9999999999999865
No 130
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=97.76 E-value=3.5e-05 Score=61.47 Aligned_cols=40 Identities=25% Similarity=0.384 Sum_probs=36.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 105 l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~ 144 (284)
T cd05081 105 LDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESE 144 (284)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCC
Confidence 458899999999999999999876 9999999999999865
No 131
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=97.76 E-value=3.3e-05 Score=61.29 Aligned_cols=40 Identities=20% Similarity=0.344 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|..+..++.+++.|+.|||... ++|||+||+||+++++
T Consensus 114 l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~ 153 (275)
T cd05046 114 LSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQ 153 (275)
T ss_pred CCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCC
Confidence 348899999999999999999887 9999999999999865
No 132
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=97.76 E-value=4.4e-05 Score=62.21 Aligned_cols=40 Identities=23% Similarity=0.364 Sum_probs=34.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
........++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 93 ~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~ 132 (316)
T cd05592 93 FDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKD 132 (316)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCC
Confidence 345667788999999999999877 9999999999999865
No 133
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=97.75 E-value=4e-05 Score=60.21 Aligned_cols=40 Identities=30% Similarity=0.521 Sum_probs=36.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 99 ~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~ 138 (256)
T cd05082 99 LGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSED 138 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCC
Confidence 448888999999999999999877 9999999999999865
No 134
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=97.75 E-value=4.1e-05 Score=60.54 Aligned_cols=40 Identities=30% Similarity=0.618 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 110 ~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~ 149 (273)
T cd05035 110 LPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLRED 149 (273)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCC
Confidence 347788999999999999999877 9999999999999875
No 135
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=97.75 E-value=4.6e-05 Score=62.45 Aligned_cols=42 Identities=26% Similarity=0.420 Sum_probs=36.9
Q ss_pred cccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 175 RNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 175 ~~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
++-.+.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 91 ~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~ 132 (329)
T cd05588 91 RKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAE 132 (329)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCC
Confidence 33457788899999999999999887 9999999999999865
No 136
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=97.74 E-value=4.5e-05 Score=59.80 Aligned_cols=41 Identities=39% Similarity=0.675 Sum_probs=37.0
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..++..+..++.++++|+.|||+.. ++|+|+||+||+++++
T Consensus 94 ~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~ 134 (260)
T PF00069_consen 94 PLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDEN 134 (260)
T ss_dssp SBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTT
T ss_pred ccccccccccccccccccccccccc---cccccccccccccccc
Confidence 3348889999999999999999987 9999999999999865
No 137
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=97.74 E-value=3.3e-05 Score=60.70 Aligned_cols=35 Identities=31% Similarity=0.563 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 184 NIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 184 ~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
++...+..||.||-+ ...++|||+||+|||+|+.+
T Consensus 195 k~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~G 229 (391)
T KOG0983|consen 195 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERG 229 (391)
T ss_pred hhHHHHHHHHHHHHH--hcceeecccCccceEEccCC
Confidence 567778899999987 44699999999999999864
No 138
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=97.74 E-value=3.3e-05 Score=62.43 Aligned_cols=39 Identities=28% Similarity=0.545 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 101 ~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~ 139 (303)
T cd07869 101 HPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDT 139 (303)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCC
Confidence 36677888999999999999887 9999999999999865
No 139
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=97.74 E-value=2.5e-05 Score=64.32 Aligned_cols=34 Identities=26% Similarity=0.619 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 183 LNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 183 ~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..++.++..|+.|||+.. |+|||+||+|||+..+
T Consensus 279 K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~ 312 (475)
T KOG0615|consen 279 KLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSND 312 (475)
T ss_pred HHHHHHHHHHHHHHHHcC---cccccCCcceEEeccC
Confidence 567889999999999988 9999999999999654
No 140
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.74 E-value=3.7e-05 Score=61.34 Aligned_cols=38 Identities=42% Similarity=0.617 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
|.....++.+++.|+.|+|+.. ++|||+||+||+++++
T Consensus 123 ~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~ 160 (283)
T cd05090 123 HGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQ 160 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCC
Confidence 6778889999999999999877 9999999999999875
No 141
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=97.74 E-value=4.6e-05 Score=62.85 Aligned_cols=41 Identities=29% Similarity=0.419 Sum_probs=36.2
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 127 ~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~ 167 (340)
T PTZ00426 127 RFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKD 167 (340)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCC
Confidence 3447778889999999999999887 9999999999999865
No 142
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.74 E-value=4.6e-05 Score=57.20 Aligned_cols=80 Identities=23% Similarity=0.144 Sum_probs=44.7
Q ss_pred ccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCC--CC
Q 038318 30 ECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIP--IE 107 (220)
Q Consensus 30 ~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p--~~ 107 (220)
.+...+||++|.+- .++ .|..++.|.+|.+++|+++..-|.--.-++.|+.|.+.+|++...-. ..
T Consensus 42 d~~d~iDLtdNdl~-~l~-----------~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pL 109 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLR-KLD-----------NLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPL 109 (233)
T ss_pred cccceecccccchh-hcc-----------cCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchh
Confidence 34456666666664 333 24456667777777777764444333334556777777776653211 11
Q ss_pred cccccccccccccc
Q 038318 108 RPLRNILAQSFIWN 121 (220)
Q Consensus 108 ~~~~~l~~l~~~~n 121 (220)
..++.|+.+.+-+|
T Consensus 110 a~~p~L~~Ltll~N 123 (233)
T KOG1644|consen 110 ASCPKLEYLTLLGN 123 (233)
T ss_pred ccCCccceeeecCC
Confidence 45566666666666
No 143
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=97.74 E-value=4.3e-05 Score=61.06 Aligned_cols=40 Identities=23% Similarity=0.468 Sum_probs=36.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|..+..++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 106 ~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~ 145 (284)
T cd05079 106 INLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESE 145 (284)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCC
Confidence 458899999999999999999877 9999999999999765
No 144
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.73 E-value=4.6e-05 Score=62.49 Aligned_cols=39 Identities=28% Similarity=0.513 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 132 ~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nill~~~ 170 (334)
T cd05100 132 TFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVLVTED 170 (334)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCC
Confidence 48889999999999999999876 9999999999999865
No 145
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=97.73 E-value=4.6e-05 Score=58.97 Aligned_cols=40 Identities=30% Similarity=0.502 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+-+.|..++.+|++++|.. .||..|||+||.||++.++
T Consensus 126 E~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~ 165 (302)
T KOG2345|consen 126 EAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDS 165 (302)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCC
Confidence 567789999999999999987 7899999999999999764
No 146
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=97.73 E-value=4.8e-05 Score=60.26 Aligned_cols=39 Identities=31% Similarity=0.615 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+....+++.+++.|++|+|+.. ++|||+||+||+++.+
T Consensus 111 ~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~ 149 (273)
T cd05074 111 PLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNEN 149 (273)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCC
Confidence 47788999999999999999877 9999999999999865
No 147
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=97.73 E-value=3.6e-05 Score=62.94 Aligned_cols=41 Identities=32% Similarity=0.389 Sum_probs=36.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.|.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 97 ~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~ 137 (324)
T cd05589 97 VFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTE 137 (324)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCC
Confidence 3458888999999999999999877 9999999999999875
No 148
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=97.73 E-value=3e-05 Score=62.00 Aligned_cols=40 Identities=25% Similarity=0.352 Sum_probs=35.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-++.....++.+++.|+.|+|+.. ++|||+||+||+++++
T Consensus 94 l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~ 133 (280)
T cd05608 94 FPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDND 133 (280)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCC
Confidence 347788899999999999999877 9999999999999865
No 149
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=97.73 E-value=3.5e-05 Score=63.98 Aligned_cols=39 Identities=26% Similarity=0.491 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 99 ~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~ 137 (364)
T cd05599 99 TEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAK 137 (364)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCC
Confidence 46677889999999999999887 9999999999999865
No 150
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.73 E-value=4.3e-05 Score=64.46 Aligned_cols=39 Identities=36% Similarity=0.436 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
-.+-..+..++..||+|+|... ++|||||.+|||+|.++
T Consensus 217 ~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G 255 (560)
T KOG0600|consen 217 EPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNG 255 (560)
T ss_pred hHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCC
Confidence 4566778899999999999988 99999999999999764
No 151
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=97.72 E-value=4.5e-05 Score=61.35 Aligned_cols=39 Identities=26% Similarity=0.488 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|...+.++.+++.|+.|+|... ++|+|+||+||+++++
T Consensus 127 ~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nill~~~ 165 (295)
T cd05097 127 SIANLLYMAVQIASGMKYLASLN---FVHRDLATRNCLVGNH 165 (295)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhEEEcCC
Confidence 48889999999999999999877 9999999999999865
No 152
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=97.72 E-value=5.1e-05 Score=62.19 Aligned_cols=39 Identities=28% Similarity=0.497 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 116 ~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~ 154 (329)
T PTZ00263 116 PNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNK 154 (329)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCC
Confidence 46667778899999999999887 9999999999999875
No 153
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=97.72 E-value=3.7e-05 Score=61.61 Aligned_cols=39 Identities=23% Similarity=0.503 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|...+.++.+++.|++|+|... ++|||+||+||+++++
T Consensus 125 ~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~nill~~~ 163 (290)
T cd05045 125 TMGDLISFAWQISRGMQYLAEMK---LVHRDLAARNVLVAEG 163 (290)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhheEEEcCC
Confidence 37888999999999999999876 9999999999999865
No 154
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.72 E-value=3.5e-05 Score=62.41 Aligned_cols=39 Identities=28% Similarity=0.513 Sum_probs=35.7
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|....+++.+++.|++|+|... ++|||+||+||+++++
T Consensus 138 ~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~~~ 176 (307)
T cd05098 138 SFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTED 176 (307)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEEcCC
Confidence 48889999999999999999876 9999999999999865
No 155
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.72 E-value=3.7e-05 Score=61.29 Aligned_cols=39 Identities=28% Similarity=0.539 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 122 ~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~ 160 (283)
T cd05091 122 EPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDK 160 (283)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCC
Confidence 47788999999999999999876 9999999999999765
No 156
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=97.72 E-value=4.8e-05 Score=60.54 Aligned_cols=38 Identities=29% Similarity=0.454 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
.|....+++.+++.|++|+|... ++|||+||+||+++.
T Consensus 114 ~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~ 151 (277)
T cd05036 114 TMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTC 151 (277)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEec
Confidence 48889999999999999999887 999999999999975
No 157
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=97.72 E-value=5.5e-05 Score=59.56 Aligned_cols=41 Identities=27% Similarity=0.455 Sum_probs=37.0
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...|...++++.+++.|+.|+|+.. ++|+|+||+||+++++
T Consensus 96 ~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~ 136 (256)
T cd05113 96 RFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQ 136 (256)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCC
Confidence 3458899999999999999999876 9999999999999865
No 158
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=97.72 E-value=5.1e-05 Score=59.82 Aligned_cols=41 Identities=24% Similarity=0.515 Sum_probs=36.4
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...+....+++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 91 ~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~ 131 (257)
T cd05115 91 EITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQ 131 (257)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCC
Confidence 3457888999999999999999876 9999999999999764
No 159
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=97.71 E-value=4.2e-05 Score=63.75 Aligned_cols=41 Identities=24% Similarity=0.478 Sum_probs=36.5
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 99 ~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~ 139 (372)
T cd07853 99 PLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSN 139 (372)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCC
Confidence 3447788899999999999999887 9999999999999875
No 160
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=97.71 E-value=3.1e-05 Score=61.87 Aligned_cols=40 Identities=38% Similarity=0.476 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.|.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 94 l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~ 133 (279)
T cd05633 94 FSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEH 133 (279)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCC
Confidence 458888999999999999999887 9999999999999865
No 161
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=97.70 E-value=6.1e-05 Score=59.35 Aligned_cols=40 Identities=23% Similarity=0.508 Sum_probs=36.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|..+..++.+++.|++|+|... ++|+|+||+||+++++
T Consensus 99 ~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~ 138 (260)
T cd05069 99 LKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDN 138 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCC
Confidence 358889999999999999999876 9999999999999875
No 162
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=97.70 E-value=3.8e-05 Score=63.27 Aligned_cols=40 Identities=35% Similarity=0.499 Sum_probs=35.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 98 l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~ 137 (350)
T cd05573 98 FPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDAD 137 (350)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCC
Confidence 346677888999999999999876 9999999999999875
No 163
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=97.70 E-value=4.1e-05 Score=61.18 Aligned_cols=39 Identities=31% Similarity=0.565 Sum_probs=35.7
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 106 ~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~ 144 (288)
T cd07863 106 PAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSG 144 (288)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCC
Confidence 47788899999999999999887 9999999999999865
No 164
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=97.70 E-value=5.9e-05 Score=61.65 Aligned_cols=38 Identities=34% Similarity=0.476 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
......++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 95 ~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~ 132 (325)
T cd05602 95 EPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQ 132 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCC
Confidence 4455668899999999999887 9999999999999865
No 165
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=97.70 E-value=4.9e-05 Score=60.03 Aligned_cols=40 Identities=25% Similarity=0.476 Sum_probs=36.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|....+++.+++.|++|+|... ++|+|+||+||+++++
T Consensus 103 ~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~ 142 (266)
T cd05033 103 FTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSN 142 (266)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCC
Confidence 358889999999999999999876 9999999999999875
No 166
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=97.70 E-value=4e-05 Score=62.40 Aligned_cols=40 Identities=35% Similarity=0.511 Sum_probs=36.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 95 l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~ 134 (318)
T cd05582 95 FTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEE 134 (318)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCC
Confidence 347788899999999999999887 9999999999999865
No 167
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=97.70 E-value=3.9e-05 Score=62.16 Aligned_cols=39 Identities=31% Similarity=0.584 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|+.. ++|||+||+||+++++
T Consensus 102 ~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~ 140 (309)
T cd07872 102 SMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINER 140 (309)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCC
Confidence 46777888999999999999877 9999999999999865
No 168
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=97.70 E-value=4.5e-05 Score=61.14 Aligned_cols=40 Identities=25% Similarity=0.449 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+|...++++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 129 l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~~~~ 168 (293)
T cd05053 129 LTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLVTED 168 (293)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEEcCC
Confidence 348889999999999999999876 9999999999999865
No 169
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=97.70 E-value=4.2e-05 Score=61.85 Aligned_cols=39 Identities=33% Similarity=0.586 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|++|+|+.. ++|||+||+||+++++
T Consensus 122 ~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~ 160 (303)
T cd05088 122 SSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGEN 160 (303)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCC
Confidence 37788999999999999999876 9999999999999865
No 170
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=97.70 E-value=4.1e-05 Score=63.34 Aligned_cols=38 Identities=29% Similarity=0.552 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+.....++.+++.|++|+|... ++|||+|++||+++++
T Consensus 167 ~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~ 204 (353)
T PLN00034 167 EQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSA 204 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCC
Confidence 4566789999999999999887 9999999999999875
No 171
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.70 E-value=4.8e-05 Score=70.19 Aligned_cols=37 Identities=30% Similarity=0.618 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 180 ~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...++++.+|+.|+.|+|... |+|||+||.||+||++
T Consensus 697 d~~wrLFreIlEGLaYIH~~g---iIHRDLKP~NIFLd~~ 733 (1351)
T KOG1035|consen 697 DEAWRLFREILEGLAYIHDQG---IIHRDLKPRNIFLDSR 733 (1351)
T ss_pred HHHHHHHHHHHHHHHHHHhCc---eeeccCCcceeEEcCC
Confidence 355788899999999999988 9999999999999975
No 172
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=97.70 E-value=5.5e-05 Score=60.87 Aligned_cols=38 Identities=26% Similarity=0.415 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
|.....++.+++.|+.|+|+.. ++|+|+||+||+++++
T Consensus 129 ~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~Nili~~~ 166 (296)
T cd05095 129 YSTLIFMATQIASGMKYLSSLN---FVHRDLATRNCLVGKN 166 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---eecccCChheEEEcCC
Confidence 6788999999999999999887 9999999999999764
No 173
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=97.70 E-value=4.9e-05 Score=60.32 Aligned_cols=39 Identities=21% Similarity=0.453 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 117 ~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~ 155 (277)
T cd05032 117 TLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAED 155 (277)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCC
Confidence 48889999999999999999876 9999999999999875
No 174
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=97.70 E-value=6.4e-05 Score=59.88 Aligned_cols=40 Identities=25% Similarity=0.424 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.|.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 106 ~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~ 145 (279)
T cd05057 106 IGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTP 145 (279)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCC
Confidence 348889999999999999999866 9999999999999765
No 175
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.69 E-value=5.8e-05 Score=63.28 Aligned_cols=42 Identities=43% Similarity=0.551 Sum_probs=36.1
Q ss_pred cccccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 173 RCRNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 173 r~~~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
|++-..-.....|..+|.+||+|+|..+ ++|||+||+|||+.
T Consensus 103 R~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~ 144 (538)
T KOG0661|consen 103 RNRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILIS 144 (538)
T ss_pred cCCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEec
Confidence 4333346678899999999999999988 99999999999987
No 176
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=97.69 E-value=5.8e-05 Score=60.21 Aligned_cols=40 Identities=20% Similarity=0.414 Sum_probs=35.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+|.....++.+++.|++|+|+.. ++|||+||+||+++.+
T Consensus 92 ~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~ 131 (277)
T cd05607 92 LEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQ 131 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCC
Confidence 347888899999999999999876 9999999999999865
No 177
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=97.69 E-value=4.9e-05 Score=59.79 Aligned_cols=39 Identities=31% Similarity=0.560 Sum_probs=35.1
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 96 ~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~ 134 (262)
T cd05058 96 TVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDES 134 (262)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCC
Confidence 47778889999999999999876 9999999999999865
No 178
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=97.69 E-value=5e-05 Score=62.14 Aligned_cols=40 Identities=30% Similarity=0.447 Sum_probs=35.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 99 l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~ 138 (330)
T cd05601 99 FDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRT 138 (330)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCC
Confidence 346677788999999999999887 9999999999999875
No 179
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=97.69 E-value=4.2e-05 Score=63.87 Aligned_cols=38 Identities=39% Similarity=0.522 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 100 ~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~ 137 (377)
T cd05629 100 EDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRG 137 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCC
Confidence 5556678899999999999887 9999999999999765
No 180
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.69 E-value=3.9e-05 Score=63.77 Aligned_cols=39 Identities=23% Similarity=0.459 Sum_probs=35.1
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 124 ~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~ 162 (364)
T cd07875 124 DHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSD 162 (364)
T ss_pred CHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCC
Confidence 36777889999999999999876 9999999999999865
No 181
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.69 E-value=5.8e-05 Score=61.35 Aligned_cols=39 Identities=28% Similarity=0.516 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|....+++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 132 ~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~~~ 170 (314)
T cd05099 132 SFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVLVTED 170 (314)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEEEcCC
Confidence 37888999999999999999876 9999999999999865
No 182
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=97.69 E-value=5.4e-05 Score=61.22 Aligned_cols=40 Identities=25% Similarity=0.391 Sum_probs=35.8
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 106 ~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~ 145 (303)
T cd05110 106 IGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSP 145 (303)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCC
Confidence 347788999999999999999876 9999999999999764
No 183
>PHA03210 serine/threonine kinase US3; Provisional
Probab=97.69 E-value=3.9e-05 Score=66.68 Aligned_cols=36 Identities=28% Similarity=0.573 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 181 DMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 181 ~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
....++.+++.||.|+|... |+|||+||+||+++.+
T Consensus 268 ~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl~~~ 303 (501)
T PHA03210 268 QTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFLNCD 303 (501)
T ss_pred HHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCC
Confidence 45578999999999999877 9999999999999865
No 184
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=97.68 E-value=3.9e-05 Score=67.57 Aligned_cols=34 Identities=35% Similarity=0.626 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 182 MLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 182 r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
...++.+++.||+|+|... |+|||+||+||++++
T Consensus 257 i~~i~~qll~aL~yLH~~g---IiHRDLKP~NILl~~ 290 (566)
T PLN03225 257 IQTIMRQILFALDGLHSTG---IVHRDVKPQNIIFSE 290 (566)
T ss_pred HHHHHHHHHHHHHHHHHCC---EEeCcCCHHHEEEeC
Confidence 4568899999999999876 999999999999985
No 185
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=97.68 E-value=4.2e-05 Score=57.88 Aligned_cols=37 Identities=24% Similarity=0.396 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHH-hhCCCCceEeeCCCCCceeecC
Q 038318 179 ISDMLNIMIDVALILEYV-HHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~l-h~~~~~~i~h~dlk~~nill~~ 218 (220)
+....+++.+++.++.|+ |... ++|||+||+||++++
T Consensus 116 ~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~~ 153 (190)
T cd05147 116 ESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYHD 153 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEEC
Confidence 567788999999999999 5656 999999999999974
No 186
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=97.68 E-value=4.9e-05 Score=59.39 Aligned_cols=39 Identities=33% Similarity=0.524 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
-.+-..++..+.+|++|+|... |+|||+||.|+|+++++
T Consensus 100 pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g 138 (318)
T KOG0659|consen 100 PADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDG 138 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCC
Confidence 3456677889999999999988 99999999999998764
No 187
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=97.68 E-value=6.8e-05 Score=59.45 Aligned_cols=38 Identities=16% Similarity=0.315 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 98 ~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~ 135 (268)
T cd05086 98 LLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSD 135 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCC
Confidence 4456788999999999999877 9999999999999764
No 188
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=97.67 E-value=5.7e-05 Score=59.47 Aligned_cols=40 Identities=20% Similarity=0.483 Sum_probs=36.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|..+..++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 100 ~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~ 139 (261)
T cd05072 100 VLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSES 139 (261)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCC
Confidence 458888999999999999999876 9999999999999875
No 189
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=97.67 E-value=4.3e-05 Score=63.78 Aligned_cols=38 Identities=32% Similarity=0.465 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
......++.+++.|++|+|... ++|||+||+||+++++
T Consensus 141 ~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~ 178 (370)
T cd05596 141 EKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKS 178 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCC
Confidence 3445667889999999999877 9999999999999875
No 190
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.67 E-value=3.8e-05 Score=63.72 Aligned_cols=38 Identities=24% Similarity=0.452 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 122 ~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~ 159 (359)
T cd07876 122 HERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSD 159 (359)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCC
Confidence 5667788999999999999887 9999999999999865
No 191
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=97.67 E-value=6.6e-05 Score=62.29 Aligned_cols=39 Identities=26% Similarity=0.500 Sum_probs=34.7
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.......++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 99 ~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~ 137 (360)
T cd05627 99 SEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAK 137 (360)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCC
Confidence 46677788999999999999877 9999999999999865
No 192
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=97.67 E-value=7.4e-05 Score=58.84 Aligned_cols=40 Identities=25% Similarity=0.519 Sum_probs=36.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|.....++.+++.|+.|+|... ++|+|+||+||+++++
T Consensus 100 ~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~ 139 (261)
T cd05068 100 LKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGEN 139 (261)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCC
Confidence 458899999999999999999877 9999999999999865
No 193
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=97.67 E-value=6.9e-05 Score=61.10 Aligned_cols=41 Identities=24% Similarity=0.377 Sum_probs=36.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+-.|.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 92 ~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~ 132 (318)
T cd05570 92 RFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSE 132 (318)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCC
Confidence 3458888999999999999999877 9999999999999875
No 194
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=97.66 E-value=4.6e-05 Score=61.88 Aligned_cols=36 Identities=28% Similarity=0.485 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
+.....++.+++.|+.|+|... ++|||+||+||+++
T Consensus 107 ~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~ 142 (317)
T cd07868 107 RGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVM 142 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEe
Confidence 5667889999999999999887 99999999999994
No 195
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=97.65 E-value=7.6e-05 Score=62.50 Aligned_cols=38 Identities=37% Similarity=0.502 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+.....++.+++.|++|+|... |+|||+||+||+++.+
T Consensus 100 e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~ 137 (381)
T cd05626 100 EVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLD 137 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCC
Confidence 5556677889999999999877 9999999999999865
No 196
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=97.65 E-value=5.7e-05 Score=61.99 Aligned_cols=39 Identities=36% Similarity=0.536 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 100 ~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~ 138 (332)
T cd05623 100 PEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMN 138 (332)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCC
Confidence 46677788999999999999877 9999999999999865
No 197
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=97.65 E-value=6.5e-05 Score=58.99 Aligned_cols=40 Identities=25% Similarity=0.414 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+|.....++.+++.|++|+|+.. ++|||+||+||+++++
T Consensus 97 ~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~ 136 (256)
T cd05114 97 LSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSST 136 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCC
Confidence 458889999999999999999877 9999999999999865
No 198
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=97.65 E-value=7e-05 Score=59.18 Aligned_cols=42 Identities=36% Similarity=0.637 Sum_probs=36.8
Q ss_pred cccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 175 RNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 175 ~~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..-+|..+.+++.++|.|+.|||... ++|++++++||+++++
T Consensus 98 ~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~ 139 (259)
T PF07714_consen 98 EPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSN 139 (259)
T ss_dssp TTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETT
T ss_pred cccccccccccccccccccccccccc---cccccccccccccccc
Confidence 34458999999999999999999887 9999999999999875
No 199
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=97.65 E-value=5.6e-05 Score=58.85 Aligned_cols=40 Identities=25% Similarity=0.427 Sum_probs=36.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 82 l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~ 121 (237)
T cd05576 82 IPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDR 121 (237)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCC
Confidence 347888999999999999999876 9999999999999875
No 200
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=97.65 E-value=6.1e-05 Score=58.94 Aligned_cols=40 Identities=25% Similarity=0.521 Sum_probs=36.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|.....++.+++.|+.|+|... ++|+|+||+||+++.+
T Consensus 91 ~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~ 130 (252)
T cd05084 91 LKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEK 130 (252)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCC
Confidence 358889999999999999999877 9999999999999865
No 201
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=97.64 E-value=5.3e-05 Score=61.90 Aligned_cols=38 Identities=32% Similarity=0.529 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 99 ~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~ 136 (323)
T cd05584 99 EDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQ 136 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCC
Confidence 5566778889999999999887 9999999999999865
No 202
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.64 E-value=7.7e-05 Score=64.12 Aligned_cols=39 Identities=28% Similarity=0.462 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
-.....+..+|..|+.|||+.. |+|||+|..|++|++++
T Consensus 117 EpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~ 155 (592)
T KOG0575|consen 117 EPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENM 155 (592)
T ss_pred cHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcC
Confidence 4456678899999999999988 99999999999999874
No 203
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=97.64 E-value=6.3e-05 Score=60.36 Aligned_cols=40 Identities=28% Similarity=0.420 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|...+.++.+++.|+.|+|+.. ++|||+||+||+++.+
T Consensus 127 ~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~Nili~~~ 166 (296)
T cd05051 127 LSFSTLLYMATQIASGMRYLESLN---FVHRDLATRNCLVGKN 166 (296)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhceeecCC
Confidence 347888999999999999999877 9999999999999865
No 204
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=97.63 E-value=5.4e-05 Score=61.93 Aligned_cols=39 Identities=26% Similarity=0.433 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 99 ~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~ 137 (328)
T cd08226 99 SEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGD 137 (328)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCC
Confidence 46677899999999999999876 9999999999999864
No 205
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=97.63 E-value=6.3e-05 Score=59.11 Aligned_cols=41 Identities=27% Similarity=0.462 Sum_probs=36.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...|.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 96 ~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~ 136 (256)
T cd05059 96 KLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGED 136 (256)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCC
Confidence 3458889999999999999999887 9999999999999865
No 206
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=97.63 E-value=8.2e-05 Score=58.45 Aligned_cols=41 Identities=29% Similarity=0.507 Sum_probs=36.9
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...|..+..++.+++.|+.|+|... ++|+|+||+||+++.+
T Consensus 91 ~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~ 131 (257)
T cd05060 91 EIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNR 131 (257)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCC
Confidence 3458899999999999999999876 9999999999999865
No 207
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=97.63 E-value=6.7e-05 Score=58.86 Aligned_cols=40 Identities=30% Similarity=0.556 Sum_probs=36.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.|.....++.+++.|+.|+|... ++|+|+||+||+++.+
T Consensus 99 ~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~ 138 (256)
T cd05039 99 ITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSED 138 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCC
Confidence 458899999999999999999887 9999999999999865
No 208
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=97.63 E-value=8.4e-05 Score=59.22 Aligned_cols=38 Identities=42% Similarity=0.646 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+.....++.+++.|+.|+|... ++|+|+||+||+++++
T Consensus 123 ~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 123 CSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEG 160 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCC
Confidence 6678899999999999999887 9999999999999865
No 209
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=97.62 E-value=8.5e-05 Score=58.42 Aligned_cols=40 Identities=20% Similarity=0.419 Sum_probs=36.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.++.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 92 ~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~ 131 (257)
T cd05116 92 VTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQ 131 (257)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCC
Confidence 457888999999999999999876 9999999999999865
No 210
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=97.62 E-value=6.4e-05 Score=62.75 Aligned_cols=38 Identities=34% Similarity=0.495 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
......++.+++.|++|+|... |+|||+||+||+++.+
T Consensus 100 ~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~ 137 (376)
T cd05598 100 EDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRD 137 (376)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCC
Confidence 4455667889999999999887 9999999999999865
No 211
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=97.61 E-value=7.6e-05 Score=58.73 Aligned_cols=40 Identities=23% Similarity=0.517 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|..+..++.+++.|+.|+|+.. ++|||+||+||+++++
T Consensus 99 ~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~ 138 (260)
T cd05070 99 LKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDG 138 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCC
Confidence 348889999999999999999877 9999999999999865
No 212
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=97.61 E-value=6.8e-05 Score=60.05 Aligned_cols=40 Identities=33% Similarity=0.416 Sum_probs=36.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.|.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 99 ~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~ 138 (285)
T cd05632 99 FEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDY 138 (285)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCC
Confidence 458889999999999999999877 9999999999999864
No 213
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=97.61 E-value=0.00012 Score=57.87 Aligned_cols=40 Identities=25% Similarity=0.465 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|..+..++.+++.|+.|+|+.. ++|+|+||+||+++++
T Consensus 103 ~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~ 142 (269)
T cd05065 103 FTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSN 142 (269)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCC
Confidence 458889999999999999999876 9999999999999765
No 214
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=97.61 E-value=6.1e-05 Score=63.03 Aligned_cols=38 Identities=34% Similarity=0.486 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
......++.+++.|++|+|... |+|||+||+||+++.+
T Consensus 100 e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~ 137 (382)
T cd05625 100 EDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRD 137 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCC
Confidence 4455667889999999999887 9999999999999865
No 215
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=97.61 E-value=7.6e-05 Score=64.50 Aligned_cols=38 Identities=29% Similarity=0.423 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 168 ~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~ 205 (478)
T PTZ00267 168 EYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPT 205 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCC
Confidence 5567788999999999999876 9999999999999865
No 216
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=97.60 E-value=7.4e-05 Score=61.30 Aligned_cols=39 Identities=33% Similarity=0.516 Sum_probs=34.4
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 100 ~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~ 138 (331)
T cd05624 100 PEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMN 138 (331)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCC
Confidence 36667778899999999999877 9999999999999865
No 217
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=97.60 E-value=6.2e-05 Score=61.05 Aligned_cols=36 Identities=31% Similarity=0.502 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
+.....++.+++.|+.|+|+.. ++|||+||+||+++
T Consensus 107 ~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~ 142 (317)
T cd07867 107 RSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVM 142 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEc
Confidence 6677899999999999999877 99999999999983
No 218
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=97.59 E-value=0.0001 Score=57.82 Aligned_cols=40 Identities=35% Similarity=0.592 Sum_probs=35.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+..+.+++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 97 ~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~ 136 (254)
T cd05083 97 VSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSED 136 (254)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCC
Confidence 347888999999999999999876 9999999999999865
No 219
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=97.59 E-value=9.1e-05 Score=58.96 Aligned_cols=39 Identities=26% Similarity=0.544 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|..+..++.+++.|++|+|... ++|+|+||+||+++++
T Consensus 115 ~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~ 153 (280)
T cd05043 115 STQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEE 153 (280)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCC
Confidence 48889999999999999999876 9999999999999764
No 220
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=97.59 E-value=8e-05 Score=62.22 Aligned_cols=38 Identities=32% Similarity=0.465 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
......++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 141 ~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~ 178 (371)
T cd05622 141 EKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKS 178 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCC
Confidence 4456678889999999999887 9999999999999865
No 221
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=97.59 E-value=7.8e-05 Score=59.72 Aligned_cols=38 Identities=21% Similarity=0.493 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+....+++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 118 ~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~ 155 (288)
T cd05061 118 LQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHD 155 (288)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCC
Confidence 6677889999999999999876 9999999999999865
No 222
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=97.59 E-value=7.5e-05 Score=59.60 Aligned_cols=40 Identities=38% Similarity=0.482 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.|..+..++.+++.|++|+|... ++|||+||+||+++++
T Consensus 94 l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~ 133 (278)
T cd05606 94 FSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEH 133 (278)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCC
Confidence 358899999999999999999876 9999999999999865
No 223
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=97.59 E-value=8.6e-05 Score=58.07 Aligned_cols=41 Identities=32% Similarity=0.549 Sum_probs=37.1
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...|.....++.+++.|+.|+|... ++|+|+||+||+++++
T Consensus 101 ~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~ 141 (262)
T cd00192 101 TLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGED 141 (262)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCC
Confidence 3458899999999999999999876 9999999999999875
No 224
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=97.59 E-value=0.0001 Score=58.33 Aligned_cols=38 Identities=24% Similarity=0.420 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
|.....++.+++.|++|+|+.. ++|||+||+||+++++
T Consensus 99 ~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~ 136 (269)
T cd05087 99 PTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTAD 136 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCC
Confidence 6677889999999999999877 9999999999999865
No 225
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=97.59 E-value=3.4e-05 Score=64.04 Aligned_cols=41 Identities=22% Similarity=0.411 Sum_probs=19.6
Q ss_pred cCCCCCCEEeccCCccccc-CCcc-----ccCCCCCCeeeccCCccc
Q 038318 61 GSLTSLEFLDISNNNLFGK-IPKS-----FKGLSRLKQLNAAHSKLE 101 (220)
Q Consensus 61 ~~l~~L~~L~ls~N~l~~~-~p~~-----~~~l~~L~~l~l~~n~l~ 101 (220)
+.++.|..|+++.+.++.. .|+. ...+++|++|+++.|++.
T Consensus 268 ~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 268 GTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred ccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 4445555555555544311 1221 233455666666666654
No 226
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=97.59 E-value=0.0001 Score=59.26 Aligned_cols=41 Identities=34% Similarity=0.545 Sum_probs=37.1
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-+|.....++.+++.|+.|+|... ++|+|+||+||+++.+
T Consensus 98 ~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~ 138 (298)
T cd07841 98 VLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASD 138 (298)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCC
Confidence 3458889999999999999999887 9999999999999865
No 227
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=97.59 E-value=8e-05 Score=61.11 Aligned_cols=39 Identities=33% Similarity=0.505 Sum_probs=34.4
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.......++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 100 ~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~ 138 (331)
T cd05597 100 PEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKN 138 (331)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCC
Confidence 35567778999999999999887 9999999999999765
No 228
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=97.58 E-value=9.4e-05 Score=58.42 Aligned_cols=39 Identities=31% Similarity=0.565 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+|.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 100 ~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~ 138 (262)
T cd05071 100 RLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGEN 138 (262)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCC
Confidence 48889999999999999999876 9999999999999865
No 229
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=97.58 E-value=7.6e-05 Score=59.64 Aligned_cols=40 Identities=25% Similarity=0.518 Sum_probs=35.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 97 ~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~ 136 (287)
T cd07848 97 VPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHN 136 (287)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCC
Confidence 347778889999999999999876 9999999999999865
No 230
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=97.58 E-value=8.9e-05 Score=59.16 Aligned_cols=39 Identities=31% Similarity=0.465 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|..+..++.+++.|+.|+|... ++|+|+||+||+++++
T Consensus 120 ~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~ 158 (280)
T cd05092 120 TLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQG 158 (280)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCC
Confidence 37888999999999999999877 9999999999999865
No 231
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=97.58 E-value=8.6e-05 Score=60.05 Aligned_cols=40 Identities=23% Similarity=0.434 Sum_probs=36.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|.+...++.+++.|+.|+|... ++|+|+||+||+++++
T Consensus 138 l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~ 177 (302)
T cd05055 138 LTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHG 177 (302)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCC
Confidence 358899999999999999999877 9999999999999764
No 232
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=97.57 E-value=0.0001 Score=58.19 Aligned_cols=40 Identities=25% Similarity=0.427 Sum_probs=36.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|..+..++.+++.|++|+|... ++|+|+||+||+++++
T Consensus 104 ~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~ 143 (268)
T cd05063 104 FSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSN 143 (268)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCC
Confidence 458889999999999999999877 9999999999999865
No 233
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=97.57 E-value=8.3e-05 Score=59.65 Aligned_cols=40 Identities=23% Similarity=0.384 Sum_probs=36.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|||... ++|+|+||+||+++++
T Consensus 103 l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~ 142 (293)
T cd07843 103 FLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNR 142 (293)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCC
Confidence 458889999999999999999887 9999999999999865
No 234
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.57 E-value=7.7e-05 Score=65.00 Aligned_cols=45 Identities=24% Similarity=0.378 Sum_probs=38.2
Q ss_pred hcccccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 172 IRCRNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 172 ~r~~~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+|....-....+++.+|..|+.|.|... |+|||+||+|+|||++
T Consensus 104 v~kG~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~ 148 (786)
T KOG0588|consen 104 VRKGPLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVK 148 (786)
T ss_pred HhhCCCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcc
Confidence 34444445677888999999999999988 9999999999999976
No 235
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=97.57 E-value=0.00011 Score=58.10 Aligned_cols=40 Identities=25% Similarity=0.436 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 103 ~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~ 142 (267)
T cd05066 103 FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSN 142 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCC
Confidence 358889999999999999999877 9999999999999765
No 236
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=97.56 E-value=9.2e-05 Score=59.24 Aligned_cols=39 Identities=33% Similarity=0.467 Sum_probs=35.7
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|...+.++.+++.|++|+|... ++|||+||+||+++++
T Consensus 128 ~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~nil~~~~ 166 (288)
T cd05050 128 SCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRNCLVGEN 166 (288)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---eecccccHhheEecCC
Confidence 47888999999999999999877 9999999999999765
No 237
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=97.56 E-value=0.0001 Score=57.86 Aligned_cols=40 Identities=25% Similarity=0.432 Sum_probs=36.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|.....++.+++.|++|+|... ++|+|+||+||+++.+
T Consensus 94 ~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~ 133 (257)
T cd05040 94 FLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASD 133 (257)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecC
Confidence 358889999999999999999876 9999999999999865
No 238
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=97.56 E-value=0.00013 Score=58.11 Aligned_cols=40 Identities=25% Similarity=0.408 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-+|..+..++.+++.|+.|+|+.. ++|+|+||+||+++.+
T Consensus 100 l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~ 139 (282)
T cd06643 100 LTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLD 139 (282)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccC
Confidence 458889999999999999999876 9999999999999754
No 239
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.56 E-value=0.00015 Score=54.48 Aligned_cols=102 Identities=16% Similarity=0.146 Sum_probs=73.5
Q ss_pred CCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccC-Ccccc
Q 038318 7 YLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKI-PKSFK 85 (220)
Q Consensus 7 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~-p~~~~ 85 (220)
+...+||++|.+- .++ .|..++.|.+|.|++|.++. +-+.+ -.-+++|+.|.+.+|.+...- -+-+.
T Consensus 43 ~~d~iDLtdNdl~-~l~-~lp~l~rL~tLll~nNrIt~-I~p~L---------~~~~p~l~~L~LtnNsi~~l~dl~pLa 110 (233)
T KOG1644|consen 43 QFDAIDLTDNDLR-KLD-NLPHLPRLHTLLLNNNRITR-IDPDL---------DTFLPNLKTLILTNNSIQELGDLDPLA 110 (233)
T ss_pred ccceecccccchh-hcc-cCCCccccceEEecCCccee-eccch---------hhhccccceEEecCcchhhhhhcchhc
Confidence 4567899999986 444 47788999999999999994 44333 234678999999999886211 12366
Q ss_pred CCCCCCeeeccCCcccccCCCC-----cccccccccccccc
Q 038318 86 GLSRLKQLNAAHSKLEEEIPIE-----RPLRNILAQSFIWN 121 (220)
Q Consensus 86 ~l~~L~~l~l~~n~l~~~~p~~-----~~~~~l~~l~~~~n 121 (220)
.++.|++|.+-+|+.+. .+.. -.+++++.+||++-
T Consensus 111 ~~p~L~~Ltll~Npv~~-k~~YR~yvl~klp~l~~LDF~kV 150 (233)
T KOG1644|consen 111 SCPKLEYLTLLGNPVEH-KKNYRLYVLYKLPSLRTLDFQKV 150 (233)
T ss_pred cCCccceeeecCCchhc-ccCceeEEEEecCcceEeehhhh
Confidence 78899999999998873 3332 46778888887654
No 240
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=97.55 E-value=9.9e-05 Score=58.29 Aligned_cols=39 Identities=33% Similarity=0.575 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|.....++.+++.|+.|+|+.. ++|+|+||+||+++.+
T Consensus 104 ~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~ 142 (269)
T cd05044 104 TLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEK 142 (269)
T ss_pred cHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecC
Confidence 48889999999999999999876 9999999999999764
No 241
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=97.55 E-value=9.3e-05 Score=62.51 Aligned_cols=40 Identities=28% Similarity=0.433 Sum_probs=36.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.|.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 234 l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~~~ 273 (400)
T cd05105 234 LTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLLAQG 273 (400)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEeCC
Confidence 348889999999999999999877 9999999999999865
No 242
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=97.55 E-value=0.00013 Score=57.44 Aligned_cols=40 Identities=25% Similarity=0.496 Sum_probs=36.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+|.....++.+++.|+.|+|... ++|+|+||+||+++++
T Consensus 101 ~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~ 140 (261)
T cd05148 101 LPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGED 140 (261)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCC
Confidence 358889999999999999999876 9999999999999865
No 243
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=97.55 E-value=9.2e-05 Score=59.31 Aligned_cols=40 Identities=30% Similarity=0.444 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 99 ~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~ 138 (285)
T cd05605 99 FDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDY 138 (285)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCC
Confidence 347888999999999999999887 9999999999999864
No 244
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=97.55 E-value=7.3e-05 Score=61.29 Aligned_cols=39 Identities=28% Similarity=0.400 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 99 ~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~ 137 (333)
T cd05600 99 SEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDAS 137 (333)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCC
Confidence 36677888999999999999887 9999999999999875
No 245
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=97.55 E-value=0.00013 Score=57.25 Aligned_cols=40 Identities=25% Similarity=0.612 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.+...++.+++.|++|+|... ++|+|+||+||+++.+
T Consensus 99 l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~ 138 (257)
T cd08223 99 LPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRT 138 (257)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecC
Confidence 348889999999999999999887 9999999999999764
No 246
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=97.54 E-value=0.00011 Score=58.52 Aligned_cols=40 Identities=23% Similarity=0.436 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|..+..++.+++.|++|+|... ++|+|+||+||+++.+
T Consensus 106 ~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~ 145 (284)
T cd05038 106 INLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESE 145 (284)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCC
Confidence 458889999999999999999876 9999999999999875
No 247
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=97.54 E-value=0.0001 Score=58.04 Aligned_cols=40 Identities=23% Similarity=0.525 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|..+..++.+++.|++|||... ++|+|+||+||+++.+
T Consensus 99 ~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~ 138 (260)
T cd05067 99 LTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSET 138 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCC
Confidence 348889999999999999999876 9999999999999865
No 248
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=97.54 E-value=0.0001 Score=55.64 Aligned_cols=36 Identities=22% Similarity=0.232 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHHhh-CCCCceEeeCCCCCceeec
Q 038318 179 ISDMLNIMIDVALILEYVHH-DHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~-~~~~~i~h~dlk~~nill~ 217 (220)
......++.+++.++.++|+ .. ++|||+||+||+++
T Consensus 116 ~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~ 152 (190)
T cd05145 116 EEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH 152 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE
Confidence 44677889999999999998 76 99999999999997
No 249
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=97.54 E-value=8.8e-05 Score=64.41 Aligned_cols=38 Identities=37% Similarity=0.523 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 142 e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~ 179 (496)
T PTZ00283 142 EHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSN 179 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCC
Confidence 5567888999999999999876 9999999999999865
No 250
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=97.54 E-value=9.7e-05 Score=67.86 Aligned_cols=39 Identities=38% Similarity=0.675 Sum_probs=35.2
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|....+++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 111 sv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~d 149 (932)
T PRK13184 111 SVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLF 149 (932)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCC
Confidence 36778899999999999999876 9999999999999865
No 251
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=97.53 E-value=0.0001 Score=59.39 Aligned_cols=40 Identities=28% Similarity=0.550 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.++.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 115 l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~ 154 (292)
T cd06658 115 MNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSD 154 (292)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCC
Confidence 357888999999999999999886 9999999999999875
No 252
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=97.53 E-value=0.00013 Score=57.71 Aligned_cols=40 Identities=18% Similarity=0.422 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.|..+..++.+++.|+.|+|+.. ++|+|+||+||+++.+
T Consensus 104 ~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~ 143 (270)
T cd05056 104 LDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSP 143 (270)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecC
Confidence 358899999999999999999876 9999999999999764
No 253
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=97.52 E-value=0.00013 Score=58.18 Aligned_cols=41 Identities=24% Similarity=0.436 Sum_probs=36.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...|..+..++.+++.|+.|+|+.. ++|+|+||+||+++.+
T Consensus 96 ~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~ 136 (286)
T cd07847 96 GVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQ 136 (286)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCC
Confidence 3458889999999999999999876 9999999999999865
No 254
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=97.52 E-value=0.00011 Score=58.62 Aligned_cols=40 Identities=25% Similarity=0.453 Sum_probs=35.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-++.....++.+++.|+.|+|... ++|+|+||+||+++.+
T Consensus 98 ~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~ 137 (285)
T cd07861 98 MDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNK 137 (285)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCC
Confidence 347788899999999999999876 9999999999999865
No 255
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=97.52 E-value=0.00011 Score=58.81 Aligned_cols=39 Identities=31% Similarity=0.500 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|+.. ++|||+||+||+++++
T Consensus 100 ~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~ 138 (285)
T cd05630 100 EEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDH 138 (285)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCC
Confidence 46788889999999999999876 9999999999999865
No 256
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=97.52 E-value=0.00015 Score=56.67 Aligned_cols=40 Identities=25% Similarity=0.458 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+|.....++.+++.++.|+|... ++|+|+||+||+++++
T Consensus 90 ~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~ 129 (250)
T cd05085 90 LKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGEN 129 (250)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCC
Confidence 358889999999999999999876 9999999999999865
No 257
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=97.52 E-value=0.00011 Score=58.51 Aligned_cols=40 Identities=30% Similarity=0.510 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.++++|+.|+|... ++|||+||+||+++.+
T Consensus 96 ~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~ 135 (284)
T cd07839 96 IDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKN 135 (284)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCC
Confidence 458888999999999999999887 9999999999999865
No 258
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=97.52 E-value=8.6e-05 Score=60.86 Aligned_cols=40 Identities=25% Similarity=0.536 Sum_probs=36.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 102 ~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~ 141 (332)
T cd07857 102 LTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNAD 141 (332)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCC
Confidence 347788899999999999999887 9999999999999865
No 259
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=97.51 E-value=0.00012 Score=57.81 Aligned_cols=40 Identities=23% Similarity=0.431 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.|.....++.+++.|+.|+|... ++|+|+||+||+++.+
T Consensus 103 ~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~ 142 (267)
T cd08229 103 IPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITAT 142 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCC
Confidence 348888999999999999999877 9999999999999865
No 260
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=97.51 E-value=0.0001 Score=66.36 Aligned_cols=39 Identities=38% Similarity=0.704 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.||+|||... |+||||||+||+++.+
T Consensus 102 ~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~ 140 (669)
T cd05610 102 DEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNE 140 (669)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCC
Confidence 36677889999999999999876 9999999999999865
No 261
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=97.51 E-value=0.00011 Score=58.50 Aligned_cols=41 Identities=32% Similarity=0.528 Sum_probs=35.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|.....++.+++.|+.|+|.. ..++|||+||+||+++++
T Consensus 100 ~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~ 140 (283)
T cd06617 100 IPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRN 140 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCC
Confidence 34788899999999999999974 249999999999999865
No 262
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=97.50 E-value=0.00013 Score=60.16 Aligned_cols=41 Identities=24% Similarity=0.502 Sum_probs=36.9
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+..|..+..++.++++|+.|+|... ++|||+||+||+++++
T Consensus 116 ~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~ 156 (345)
T cd07877 116 KLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNED 156 (345)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCC
Confidence 3458889999999999999999887 9999999999999875
No 263
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=97.50 E-value=0.00011 Score=59.32 Aligned_cols=40 Identities=33% Similarity=0.583 Sum_probs=35.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|++|+|... ++|+|+||+||+++++
T Consensus 101 ~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~ 140 (301)
T cd07873 101 INMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINER 140 (301)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCC
Confidence 347778889999999999999876 9999999999999875
No 264
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=97.50 E-value=0.00014 Score=56.88 Aligned_cols=40 Identities=23% Similarity=0.385 Sum_probs=35.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|+|+|++||+++++
T Consensus 98 ~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~ 137 (256)
T cd08529 98 LPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAY 137 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCC
Confidence 347788899999999999999876 9999999999999864
No 265
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=97.50 E-value=0.00015 Score=58.67 Aligned_cols=38 Identities=26% Similarity=0.458 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+.....++.+++.|+.|+|... ++|||+|++||+++.+
T Consensus 100 ~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~ 137 (314)
T cd08216 100 ELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGD 137 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecC
Confidence 5566778999999999999887 9999999999999864
No 266
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=97.50 E-value=1.9e-05 Score=63.75 Aligned_cols=118 Identities=14% Similarity=0.100 Sum_probs=74.8
Q ss_pred CCCCCCCceecCCCccCCccChh----hhccccCCeeeccCCCCCCCCChh-hhc-------------CccC--------
Q 038318 3 GSLTYLRTPHLGSNNLTSSISLS----LWNVECILYIDLSSNSLSGFLPSN-IEK-------------LKVL-------- 56 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p~~----~~~l~~L~~L~Ls~N~l~g~~p~~-~~~-------------l~~L-------- 56 (220)
-..++|++||||+|.|...-+.. +.++..|+.|.|.+|.+. +.-.. ++. -+.|
T Consensus 89 ~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg-~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rN 167 (382)
T KOG1909|consen 89 LGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLG-PEAGGRLGRALFELAVNKKAASKPKLRVFICGRN 167 (382)
T ss_pred hcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCC-hhHHHHHHHHHHHHHHHhccCCCcceEEEEeecc
Confidence 45678999999999998555544 466888999999999885 32211 111 1111
Q ss_pred ----------hhhhcCCCCCCEEeccCCccccc----CCccccCCCCCCeeeccCCcccccCCC----C-cccccccccc
Q 038318 57 ----------VDCFGSLTSLEFLDISNNNLFGK----IPKSFKGLSRLKQLNAAHSKLEEEIPI----E-RPLRNILAQS 117 (220)
Q Consensus 57 ----------p~~~~~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~l~l~~n~l~~~~p~----~-~~~~~l~~l~ 117 (220)
-..|...+.|+.+.++.|.+... +-..+..+++|+.||+..|-|+-.-.. . ..+++++.++
T Consensus 168 rlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~ 247 (382)
T KOG1909|consen 168 RLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELN 247 (382)
T ss_pred ccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeec
Confidence 34566667777777777766411 113466788899999998887631110 0 3455666666
Q ss_pred cccc
Q 038318 118 FIWN 121 (220)
Q Consensus 118 ~~~n 121 (220)
++..
T Consensus 248 l~dc 251 (382)
T KOG1909|consen 248 LGDC 251 (382)
T ss_pred cccc
Confidence 6544
No 267
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=97.50 E-value=0.00012 Score=60.08 Aligned_cols=42 Identities=31% Similarity=0.498 Sum_probs=37.0
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
...|..+..++.+++.|+.|+|... ++|||+||+||++++++
T Consensus 103 ~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~ 144 (337)
T cd07852 103 ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDC 144 (337)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCC
Confidence 3458888899999999999999876 99999999999998763
No 268
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=97.49 E-value=0.00014 Score=58.30 Aligned_cols=38 Identities=26% Similarity=0.452 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
+|.....++.+++.|+.|+|... ++|||+||+||+++.
T Consensus 108 ~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~ 145 (295)
T cd07837 108 PAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDK 145 (295)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEec
Confidence 58888999999999999999876 999999999999986
No 269
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=97.49 E-value=5.4e-05 Score=61.26 Aligned_cols=37 Identities=27% Similarity=0.591 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 180 ~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
....-+..++.+|+-|+|+.. ++|||+||+|++++++
T Consensus 125 ~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~ 161 (359)
T KOG0660|consen 125 DHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNAD 161 (359)
T ss_pred HHHHHHHHHHHHhcchhhccc---ccccccchhheeeccC
Confidence 345567889999999999998 9999999999999876
No 270
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=97.49 E-value=0.00016 Score=56.46 Aligned_cols=40 Identities=33% Similarity=0.591 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|.....++.+++.|++|+|+.. ++|+|+||+||+++.+
T Consensus 100 ~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~ 139 (258)
T smart00219 100 LSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGEN 139 (258)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccC
Confidence 458889999999999999999887 9999999999999875
No 271
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=97.48 E-value=0.00013 Score=61.69 Aligned_cols=39 Identities=31% Similarity=0.436 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+|.+..+++.+++.|++|+|... ++|||+||+||+++++
T Consensus 237 ~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~NiLl~~~ 275 (401)
T cd05107 237 SYMDLVGFSYQVANGMEFLASKN---CVHRDLAARNVLICEG 275 (401)
T ss_pred CHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcceEEEeCC
Confidence 38889999999999999999765 9999999999999864
No 272
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=97.48 E-value=0.00011 Score=58.14 Aligned_cols=40 Identities=25% Similarity=0.343 Sum_probs=36.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|.....++.+++.|+.|+|+.. ++|+|+|++||+++++
T Consensus 108 l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~ 147 (272)
T cd06637 108 LKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTEN 147 (272)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCC
Confidence 347788899999999999999876 9999999999999865
No 273
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=97.47 E-value=0.00012 Score=58.68 Aligned_cols=39 Identities=33% Similarity=0.520 Sum_probs=34.7
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|+|+||+||+++.+
T Consensus 101 ~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~ 139 (291)
T cd07870 101 HPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYL 139 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCC
Confidence 36677789999999999999886 9999999999999764
No 274
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=97.47 E-value=0.00016 Score=57.01 Aligned_cols=40 Identities=18% Similarity=0.483 Sum_probs=35.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|..+..++.+++.|++|+|+.. ++|+|+||+||+++.+
T Consensus 99 ~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~ 138 (260)
T cd05073 99 QPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSAS 138 (260)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCC
Confidence 348888999999999999999876 9999999999999765
No 275
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=97.46 E-value=0.00014 Score=57.33 Aligned_cols=39 Identities=21% Similarity=0.441 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.......++.+++.|+.|+|+.. ++|+|+||+||+++++
T Consensus 104 ~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~ 142 (267)
T cd08228 104 PERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITAT 142 (267)
T ss_pred CHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCC
Confidence 35677899999999999999876 9999999999999865
No 276
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=97.46 E-value=0.00015 Score=62.83 Aligned_cols=39 Identities=31% Similarity=0.492 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+|.....++.+++.++.|+|... ++|||+||+||+++.+
T Consensus 307 ~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~ 345 (507)
T PLN03224 307 DINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVD 345 (507)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCC
Confidence 47788899999999999999877 9999999999999875
No 277
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.46 E-value=0.00012 Score=59.02 Aligned_cols=40 Identities=25% Similarity=0.517 Sum_probs=36.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|++|+|... ++|+|+||+||+++.+
T Consensus 113 ~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~ 152 (296)
T cd06654 113 MDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMD 152 (296)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCC
Confidence 347788999999999999999877 9999999999999865
No 278
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=97.45 E-value=0.00018 Score=56.25 Aligned_cols=39 Identities=31% Similarity=0.570 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.++.|+|... ++|||+||+||+++.+
T Consensus 91 ~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~ 129 (251)
T cd05041 91 TVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGEN 129 (251)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCC
Confidence 47788899999999999999887 9999999999999865
No 279
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=97.45 E-value=0.00015 Score=56.93 Aligned_cols=40 Identities=43% Similarity=0.677 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+..+..++.+++.|++|+|... ++|+|++|+||+++++
T Consensus 90 ~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~ 129 (265)
T cd05579 90 LDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSN 129 (265)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCC
Confidence 347788999999999999999877 9999999999999875
No 280
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=97.44 E-value=0.00018 Score=58.00 Aligned_cols=38 Identities=24% Similarity=0.470 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-....-+..++.+|+.|||..- |+|||+|+||+|+...
T Consensus 176 ~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~ 213 (419)
T KOG0663|consen 176 PGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHK 213 (419)
T ss_pred hHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccC
Confidence 4455667899999999999988 9999999999999765
No 281
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=97.44 E-value=0.00015 Score=57.81 Aligned_cols=40 Identities=25% Similarity=0.550 Sum_probs=36.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+|.....++.+++.|+.|+|... ++|+|++|+||+++++
T Consensus 97 ~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~ 136 (286)
T cd07846 97 LDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQS 136 (286)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCC
Confidence 458899999999999999999876 9999999999999875
No 282
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=97.43 E-value=0.00016 Score=57.70 Aligned_cols=40 Identities=25% Similarity=0.474 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.|.....++.+++.|++|+|... ++|+|++|+||+++++
T Consensus 97 l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~ 136 (284)
T cd07860 97 IPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTE 136 (284)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCC
Confidence 348888999999999999999876 9999999999999875
No 283
>PHA02988 hypothetical protein; Provisional
Probab=97.43 E-value=0.00014 Score=58.29 Aligned_cols=42 Identities=19% Similarity=0.173 Sum_probs=36.1
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhC-CCCceEeeCCCCCceeecCCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHD-HSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~-~~~~i~h~dlk~~nill~~~~ 220 (220)
.-.|..+.+++.+++.|+.|+|.. . ++|||+||+||++++++
T Consensus 118 ~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~~ 160 (283)
T PHA02988 118 DLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTENY 160 (283)
T ss_pred CCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCCC
Confidence 345889999999999999999974 4 66999999999998763
No 284
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=97.43 E-value=0.00016 Score=57.86 Aligned_cols=41 Identities=24% Similarity=0.405 Sum_probs=36.5
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...|.....++.+++.|++|+|... ++|+|+||+||+++++
T Consensus 124 ~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~ 164 (291)
T cd06639 124 RLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTE 164 (291)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCC
Confidence 3458888999999999999999876 9999999999999865
No 285
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=97.41 E-value=0.00026 Score=61.31 Aligned_cols=35 Identities=37% Similarity=0.657 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 180 ~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
..+..|+.+++.|+.|||..+ ++|||+||+|||++
T Consensus 415 ~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~ 449 (612)
T KOG0603|consen 415 SEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLD 449 (612)
T ss_pred HHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeec
Confidence 355679999999999999988 99999999999994
No 286
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=97.41 E-value=0.0002 Score=56.60 Aligned_cols=38 Identities=29% Similarity=0.525 Sum_probs=33.9
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
.+.....++.+++.|+.|+|... ++|||+||+||+++.
T Consensus 106 ~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~ 143 (268)
T cd06624 106 NEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNT 143 (268)
T ss_pred cHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcC
Confidence 36677888999999999999876 999999999999975
No 287
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.41 E-value=0.00047 Score=54.54 Aligned_cols=41 Identities=22% Similarity=0.348 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCc--eEeeCCCCCceeecCCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTL--MVHCDLKPDNILIDENM 220 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~--i~h~dlk~~nill~~~~ 220 (220)
-...+++..+.+.||..+|.. .+. +.|||+||.||+++..+
T Consensus 123 E~~Vwk~f~QL~~AL~~cH~~-~~r~~VmHRDIKPaNIFl~~~g 165 (375)
T KOG0591|consen 123 EKTVWKYFVQLCRALYHCHSK-IPRGTVMHRDIKPANIFLTANG 165 (375)
T ss_pred hHHHHHHHHHHHHHHHHHhcc-ccccceeeccCcchheEEcCCC
Confidence 446688899999999999984 444 99999999999998763
No 288
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=97.41 E-value=0.0002 Score=56.77 Aligned_cols=41 Identities=22% Similarity=0.425 Sum_probs=36.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.|.....++.++++|+.|+|... ++|||+||+||+++.+
T Consensus 105 ~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~ 145 (267)
T PHA03390 105 KLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRA 145 (267)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCC
Confidence 3458899999999999999999877 9999999999999865
No 289
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=97.41 E-value=0.00024 Score=56.44 Aligned_cols=39 Identities=31% Similarity=0.537 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 120 ~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~ 158 (280)
T cd05049 120 TLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYD 158 (280)
T ss_pred cHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCC
Confidence 37788999999999999999876 9999999999999765
No 290
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=97.41 E-value=0.00016 Score=59.30 Aligned_cols=40 Identities=28% Similarity=0.551 Sum_probs=36.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 104 ~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~ 143 (334)
T cd07855 104 LTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNED 143 (334)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCC
Confidence 458888999999999999999877 9999999999999875
No 291
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=97.40 E-value=0.00015 Score=58.11 Aligned_cols=36 Identities=31% Similarity=0.514 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 181 DMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 181 ~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
....|..++..|+.|||+.- ++|||+||.||++..+
T Consensus 133 mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgd 168 (438)
T KOG0666|consen 133 MVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGD 168 (438)
T ss_pred HHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEecc
Confidence 44678899999999999998 9999999999999776
No 292
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=97.40 E-value=0.00016 Score=59.31 Aligned_cols=40 Identities=28% Similarity=0.541 Sum_probs=35.8
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|+.. ++|||+||+||+++.+
T Consensus 103 l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~ 142 (336)
T cd07849 103 LSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTN 142 (336)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCC
Confidence 447788889999999999999887 9999999999999865
No 293
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=97.40 E-value=0.00018 Score=59.54 Aligned_cols=39 Identities=23% Similarity=0.459 Sum_probs=34.7
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
++.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 116 ~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~ 154 (353)
T cd07850 116 DHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSD 154 (353)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCC
Confidence 35677788999999999999887 9999999999999875
No 294
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.40 E-value=0.00023 Score=60.82 Aligned_cols=39 Identities=26% Similarity=0.436 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
-.+-..++.++.+||+|||... |+|||+|+.|||++.++
T Consensus 368 E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g 406 (550)
T KOG0578|consen 368 EGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDG 406 (550)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCC
Confidence 3456778899999999999988 99999999999998763
No 295
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=97.40 E-value=0.00024 Score=56.58 Aligned_cols=40 Identities=28% Similarity=0.519 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.|.....++.+++.|+.|+|... ++|+|++++||+++++
T Consensus 104 l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~ 143 (287)
T cd07838 104 LPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSD 143 (287)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccC
Confidence 458899999999999999999877 9999999999999875
No 296
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=97.40 E-value=0.00017 Score=59.40 Aligned_cols=41 Identities=24% Similarity=0.475 Sum_probs=36.5
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...|.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 114 ~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~ 154 (343)
T cd07880 114 KLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNED 154 (343)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCC
Confidence 3448888999999999999999877 9999999999999865
No 297
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=97.40 E-value=0.00019 Score=57.12 Aligned_cols=40 Identities=23% Similarity=0.470 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-+|.....++.+++.|+.|+|+.. ++|+|+||+||+++++
T Consensus 97 ~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~ 136 (284)
T cd07836 97 LDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKR 136 (284)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCC
Confidence 358889999999999999999876 9999999999999865
No 298
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=97.40 E-value=0.00016 Score=62.64 Aligned_cols=37 Identities=30% Similarity=0.637 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
......++.++..||.+||... |||+|+||+||||..
T Consensus 288 l~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~ 324 (586)
T KOG0667|consen 288 LPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKD 324 (586)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeecc
Confidence 4556788999999999999887 999999999999965
No 299
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=97.39 E-value=0.0002 Score=56.61 Aligned_cols=40 Identities=28% Similarity=0.306 Sum_probs=35.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.++.....++.+++.|+.|+|... ++|+|+||+||+++.+
T Consensus 103 l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~ 142 (266)
T cd06651 103 LTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSA 142 (266)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCC
Confidence 347777889999999999999776 9999999999999865
No 300
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=97.39 E-value=0.00023 Score=55.97 Aligned_cols=40 Identities=25% Similarity=0.501 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|.....++.+++.|+.|+|... ++|+|+||+||+++++
T Consensus 100 ~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~ 139 (261)
T cd05034 100 LRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGEN 139 (261)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCC
Confidence 348888999999999999999887 9999999999999865
No 301
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=97.38 E-value=0.00019 Score=57.67 Aligned_cols=41 Identities=24% Similarity=0.412 Sum_probs=36.9
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...|.....++.+++.|+.|||+.. ++|+|+||+||+++++
T Consensus 112 ~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~ 152 (302)
T cd07864 112 HFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNK 152 (302)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCC
Confidence 3458899999999999999999876 9999999999999865
No 302
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=97.38 E-value=0.00017 Score=56.45 Aligned_cols=39 Identities=26% Similarity=0.560 Sum_probs=36.1
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+|..+..++.+++.|+.|+|+.. ++|+|+||+||+++++
T Consensus 99 ~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~ 137 (257)
T cd08225 99 SEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKN 137 (257)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCC
Confidence 58899999999999999999887 9999999999999765
No 303
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=97.38 E-value=0.00028 Score=56.57 Aligned_cols=40 Identities=25% Similarity=0.397 Sum_probs=35.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|.....++.+++.++.|+|... ++|||+||+||+++.+
T Consensus 107 l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~ 146 (292)
T cd06644 107 LTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLD 146 (292)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCC
Confidence 348888999999999999999876 9999999999999754
No 304
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=97.38 E-value=0.0002 Score=57.80 Aligned_cols=41 Identities=32% Similarity=0.549 Sum_probs=36.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.+.....++.++++|+.|+|... ++|+|+||+||+++++
T Consensus 111 ~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~ 151 (311)
T cd07866 111 KLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQ 151 (311)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCC
Confidence 3458888999999999999999887 9999999999999865
No 305
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=97.38 E-value=0.00021 Score=57.69 Aligned_cols=40 Identities=28% Similarity=0.442 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|+|+|++||+++++
T Consensus 114 ~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~ 153 (297)
T cd06659 114 LNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLD 153 (297)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccC
Confidence 348888999999999999999877 9999999999999865
No 306
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=97.37 E-value=0.00023 Score=57.77 Aligned_cols=39 Identities=38% Similarity=0.467 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|+|+||+||+++.+
T Consensus 101 ~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~ 139 (316)
T cd05574 101 SEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHES 139 (316)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCC
Confidence 46777888999999999999876 9999999999999864
No 307
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=97.37 E-value=0.00025 Score=55.79 Aligned_cols=39 Identities=23% Similarity=0.482 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|+|++|+||+++++
T Consensus 104 ~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~ 142 (267)
T cd08224 104 PERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITAT 142 (267)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCC
Confidence 47788999999999999999877 9999999999999865
No 308
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=97.37 E-value=0.00019 Score=57.01 Aligned_cols=40 Identities=28% Similarity=0.450 Sum_probs=36.4
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
.-.|.....++.+++.|++|+|... ++|||++|+||+++.
T Consensus 96 ~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~ 135 (282)
T cd07831 96 PLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD 135 (282)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC
Confidence 3458899999999999999999887 999999999999975
No 309
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=97.37 E-value=0.00023 Score=56.77 Aligned_cols=38 Identities=26% Similarity=0.411 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+.....++.+++.|+.|+|+.. ++|+|+||+||+++.+
T Consensus 94 ~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~ 131 (279)
T cd06619 94 EHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTR 131 (279)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCC
Confidence 5667789999999999999876 9999999999999865
No 310
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=97.37 E-value=0.0002 Score=57.96 Aligned_cols=41 Identities=27% Similarity=0.491 Sum_probs=37.0
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...|.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 104 ~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~ 144 (309)
T cd07845 104 PFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDK 144 (309)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCC
Confidence 3458889999999999999999887 9999999999999865
No 311
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=97.37 E-value=6.5e-05 Score=35.75 Aligned_cols=21 Identities=48% Similarity=0.434 Sum_probs=13.6
Q ss_pred CCCceecCCCccCCccChhhhc
Q 038318 7 YLRTPHLGSNNLTSSISLSLWN 28 (220)
Q Consensus 7 ~L~~L~Ls~n~l~g~~p~~~~~ 28 (220)
+|++|||++|+++ .+|++|++
T Consensus 1 ~L~~Ldls~n~l~-~ip~~~~~ 21 (22)
T PF00560_consen 1 NLEYLDLSGNNLT-SIPSSFSN 21 (22)
T ss_dssp TESEEEETSSEES-EEGTTTTT
T ss_pred CccEEECCCCcCE-eCChhhcC
Confidence 4666777777776 66666544
No 312
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.37 E-value=9.2e-05 Score=57.56 Aligned_cols=84 Identities=21% Similarity=0.250 Sum_probs=47.4
Q ss_pred CCCCCceecCCCccCCccChhhhccccCCeeeccCC--CCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCc
Q 038318 5 LTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSN--SLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPK 82 (220)
Q Consensus 5 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N--~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~ 82 (220)
+..|+.|++.+..++ .+ ..+-.|++|+.|.+|.| ..++.++.- .-.+++|+++++|+|.+.. ++
T Consensus 42 ~~~le~ls~~n~glt-t~-~~~P~Lp~LkkL~lsdn~~~~~~~l~vl----------~e~~P~l~~l~ls~Nki~~--ls 107 (260)
T KOG2739|consen 42 FVELELLSVINVGLT-TL-TNFPKLPKLKKLELSDNYRRVSGGLEVL----------AEKAPNLKVLNLSGNKIKD--LS 107 (260)
T ss_pred ccchhhhhhhcccee-ec-ccCCCcchhhhhcccCCcccccccceeh----------hhhCCceeEEeecCCcccc--cc
Confidence 345566666666665 22 13445667777777777 444443331 2334677777777777652 33
Q ss_pred c---ccCCCCCCeeeccCCcccc
Q 038318 83 S---FKGLSRLKQLNAAHSKLEE 102 (220)
Q Consensus 83 ~---~~~l~~L~~l~l~~n~l~~ 102 (220)
. +..+.+|..|++.+|.-+.
T Consensus 108 tl~pl~~l~nL~~Ldl~n~~~~~ 130 (260)
T KOG2739|consen 108 TLRPLKELENLKSLDLFNCSVTN 130 (260)
T ss_pred ccchhhhhcchhhhhcccCCccc
Confidence 3 3344556677777765553
No 313
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=97.37 E-value=0.00022 Score=55.92 Aligned_cols=44 Identities=30% Similarity=0.422 Sum_probs=37.3
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCC--CCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDH--STLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~--~~~i~h~dlk~~nill~~~ 219 (220)
..+|.....++.+++.|+.|+|..+ ...++|+|++|+||+++++
T Consensus 101 ~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~ 146 (265)
T cd08217 101 YIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDAN 146 (265)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecC
Confidence 3458888999999999999999543 5569999999999999864
No 314
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=97.37 E-value=0.00021 Score=57.62 Aligned_cols=40 Identities=30% Similarity=0.511 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|+|+||+||+++.+
T Consensus 116 ~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~ 155 (310)
T cd07865 116 FTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKD 155 (310)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCC
Confidence 358888999999999999999886 9999999999999865
No 315
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=97.37 E-value=0.00022 Score=56.01 Aligned_cols=38 Identities=29% Similarity=0.351 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+.....++.+++.|+.|+|... ++|+|++|+||+++++
T Consensus 103 ~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~ 140 (263)
T cd06625 103 ETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSA 140 (263)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCC
Confidence 5667888999999999999887 9999999999999875
No 316
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=97.36 E-value=0.00022 Score=56.32 Aligned_cols=39 Identities=26% Similarity=0.296 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
++....+++.+++.|++|+|+.. ++|+|+||+||+++.+
T Consensus 104 ~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~ 142 (265)
T cd06652 104 TENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSV 142 (265)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCC
Confidence 46677889999999999999887 9999999999999865
No 317
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=97.36 E-value=4.3e-05 Score=59.84 Aligned_cols=35 Identities=31% Similarity=0.585 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 184 NIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 184 ~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
+|+..+..||+||-. ...|+|||+||+|||+|.++
T Consensus 171 ~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G 205 (361)
T KOG1006|consen 171 HITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHG 205 (361)
T ss_pred heeeeehhHHHHHHH--HhhhhhccCChhheEEecCC
Confidence 455566789999986 45699999999999999764
No 318
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.36 E-value=0.00013 Score=56.28 Aligned_cols=38 Identities=26% Similarity=0.474 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.....+..++|.|+.|+|... ++|||+||+|+|++.+
T Consensus 123 e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~ 160 (281)
T KOG0580|consen 123 EQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSA 160 (281)
T ss_pred ccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCC
Confidence 3456778999999999999887 9999999999999754
No 319
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=97.35 E-value=0.00032 Score=56.76 Aligned_cols=41 Identities=27% Similarity=0.369 Sum_probs=36.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...|.....++.+++.|+.|+|... ++|+|++|+||+++.+
T Consensus 111 ~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~ 151 (307)
T cd06607 111 PLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEP 151 (307)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCC
Confidence 3458888999999999999999877 9999999999999875
No 320
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=97.35 E-value=0.00019 Score=56.54 Aligned_cols=39 Identities=28% Similarity=0.469 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|++|+|... ++|||++|+||+++++
T Consensus 104 ~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~ 142 (267)
T cd06628 104 EETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNK 142 (267)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCC
Confidence 36677889999999999999876 9999999999999765
No 321
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=97.35 E-value=0.00024 Score=57.18 Aligned_cols=41 Identities=24% Similarity=0.425 Sum_probs=35.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+|..+..++.+++.|+.|+|.. .+++|||++|+||+++++
T Consensus 111 l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~ 151 (296)
T cd06618 111 IPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDAS 151 (296)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCC
Confidence 45788889999999999999963 249999999999999865
No 322
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=97.35 E-value=0.00022 Score=56.80 Aligned_cols=40 Identities=28% Similarity=0.480 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.|..+.+++.+++.|++|+|... ++|+|++|+||+++.+
T Consensus 96 ~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~ 135 (283)
T cd07835 96 LDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDRE 135 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCC
Confidence 458899999999999999999876 9999999999999864
No 323
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=97.35 E-value=0.00023 Score=56.72 Aligned_cols=40 Identities=28% Similarity=0.421 Sum_probs=35.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|+.. ++|+|+||+||+++.+
T Consensus 96 ~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~ 135 (286)
T cd07832 96 LPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISAD 135 (286)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCC
Confidence 347788999999999999999877 9999999999999864
No 324
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=97.34 E-value=0.00026 Score=56.25 Aligned_cols=40 Identities=28% Similarity=0.437 Sum_probs=36.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+..+..++.+++.|+.|+|... ++|+|++|+||+++.+
T Consensus 95 ~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~ 134 (283)
T cd05118 95 LPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTE 134 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCC
Confidence 347889999999999999999887 9999999999999864
No 325
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=97.34 E-value=0.00029 Score=56.39 Aligned_cols=40 Identities=25% Similarity=0.505 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.++.....++.+++.|++|+|... ++|||++|+||+++++
T Consensus 112 ~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~ 151 (285)
T cd06648 112 MNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSD 151 (285)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCC
Confidence 457788999999999999999887 9999999999999875
No 326
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=97.34 E-value=0.00023 Score=60.46 Aligned_cols=36 Identities=31% Similarity=0.460 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 182 MLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 182 r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
..-++.++.+|++|||... |++||+||+|.+||.++
T Consensus 522 arF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~G 557 (732)
T KOG0614|consen 522 ARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRG 557 (732)
T ss_pred hhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCC
Confidence 3446677889999999988 99999999999999764
No 327
>PRK09188 serine/threonine protein kinase; Provisional
Probab=97.33 E-value=0.00025 Score=59.03 Aligned_cols=34 Identities=26% Similarity=0.367 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHhhCCCCceEeeCC-CCCceeecCC
Q 038318 183 LNIMIDVALILEYVHHDHSTLMVHCDL-KPDNILIDEN 219 (220)
Q Consensus 183 ~~i~~~ia~~l~~lh~~~~~~i~h~dl-k~~nill~~~ 219 (220)
..++.++++++.|+|... ++|||+ ||+||+++.+
T Consensus 114 ~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~ 148 (365)
T PRK09188 114 PAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPD 148 (365)
T ss_pred HHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCC
Confidence 356678889999999876 999999 9999999754
No 328
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=97.33 E-value=0.00025 Score=57.34 Aligned_cols=39 Identities=38% Similarity=0.577 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|.....++.+++.|+.|+|+.. ++|||+||+||+++++
T Consensus 99 ~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~ 137 (305)
T cd05609 99 PVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSM 137 (305)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCC
Confidence 47777888899999999999876 9999999999999865
No 329
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=97.33 E-value=0.00032 Score=57.11 Aligned_cols=41 Identities=29% Similarity=0.426 Sum_probs=36.7
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...|..+..++.+++.|+.|+|... ++|+|++|+||+++.+
T Consensus 121 ~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~ 161 (317)
T cd06635 121 PLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEP 161 (317)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCC
Confidence 3458889999999999999999887 9999999999999864
No 330
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.33 E-value=0.00022 Score=57.54 Aligned_cols=40 Identities=23% Similarity=0.509 Sum_probs=35.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|+|+||+||+++.+
T Consensus 112 ~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~ 151 (297)
T cd06656 112 MDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMD 151 (297)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCC
Confidence 347788899999999999999876 9999999999999865
No 331
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=97.32 E-value=0.00024 Score=56.52 Aligned_cols=41 Identities=29% Similarity=0.436 Sum_probs=36.9
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..++.....++.+++.|+.|+|... ++|+|++|+||+++++
T Consensus 96 ~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~ 136 (287)
T cd07840 96 KFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINND 136 (287)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCC
Confidence 3458888999999999999999877 9999999999999875
No 332
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.32 E-value=0.00033 Score=57.40 Aligned_cols=40 Identities=28% Similarity=0.413 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|+. ..++|||+||+||+++.+
T Consensus 101 ~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~ 140 (331)
T cd06649 101 PEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSR 140 (331)
T ss_pred CHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCC
Confidence 4667788999999999999973 239999999999999865
No 333
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=97.32 E-value=0.00025 Score=55.97 Aligned_cols=39 Identities=26% Similarity=0.318 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+....+++.+++.|+.|+|... ++|+|+||+||+++.+
T Consensus 104 ~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~ 142 (264)
T cd06653 104 TENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSA 142 (264)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCC
Confidence 46677889999999999999887 9999999999999865
No 334
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=97.31 E-value=0.00026 Score=56.63 Aligned_cols=39 Identities=28% Similarity=0.383 Sum_probs=34.1
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|||++|+||+++++
T Consensus 103 ~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~ 141 (290)
T cd05613 103 KEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSN 141 (290)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCC
Confidence 35666777889999999999877 9999999999999875
No 335
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.31 E-value=0.00028 Score=55.65 Aligned_cols=40 Identities=25% Similarity=0.354 Sum_probs=35.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|+.. ++|||++|+||+++.+
T Consensus 103 ~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~ 142 (267)
T cd06646 103 LSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDN 142 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCC
Confidence 347788889999999999999876 9999999999999865
No 336
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=97.30 E-value=0.00028 Score=56.51 Aligned_cols=39 Identities=31% Similarity=0.576 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 101 ~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~ 139 (291)
T cd07844 101 SMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISER 139 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCC
Confidence 36677888899999999999877 9999999999999865
No 337
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=97.30 E-value=0.00037 Score=54.48 Aligned_cols=40 Identities=30% Similarity=0.521 Sum_probs=36.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-+|.....++.+++.|+.|+|... ++|+|++|+||+++++
T Consensus 96 l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~ 135 (256)
T cd06612 96 LTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEE 135 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCC
Confidence 358889999999999999999877 9999999999999865
No 338
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=97.30 E-value=0.00028 Score=56.41 Aligned_cols=41 Identities=29% Similarity=0.476 Sum_probs=34.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|++|+|+. ..++|||+||+||+++.+
T Consensus 104 l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~ 144 (288)
T cd06616 104 IPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRN 144 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccC
Confidence 44777889999999999999974 239999999999999764
No 339
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=97.30 E-value=0.00024 Score=58.57 Aligned_cols=39 Identities=26% Similarity=0.535 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 115 ~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~ 153 (342)
T cd07879 115 SEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNED 153 (342)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCC
Confidence 47778889999999999999887 9999999999999865
No 340
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.29 E-value=0.00026 Score=57.05 Aligned_cols=40 Identities=23% Similarity=0.510 Sum_probs=36.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+|..+..++.+++.|++|+|... ++|+|+||+||+++.+
T Consensus 112 l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~ 151 (296)
T cd06655 112 MDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMD 151 (296)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCC
Confidence 458899999999999999999876 9999999999999865
No 341
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=97.29 E-value=0.00028 Score=55.47 Aligned_cols=39 Identities=31% Similarity=0.497 Sum_probs=34.7
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|+|++|+||+++++
T Consensus 95 ~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~ 133 (260)
T cd05611 95 PEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQT 133 (260)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCC
Confidence 36677889999999999999876 9999999999999865
No 342
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.29 E-value=0.0002 Score=60.46 Aligned_cols=37 Identities=35% Similarity=0.576 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
.....+|+.++..||.|||.+| .|||-|+||+|||+.
T Consensus 186 l~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 186 LSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 5577899999999999999976 799999999999984
No 343
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=97.28 E-value=0.00032 Score=54.96 Aligned_cols=40 Identities=20% Similarity=0.374 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.++.....++.+++.++.|+|+.. ++|+|++|+||+++++
T Consensus 98 ~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~ 137 (256)
T cd08221 98 FEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKA 137 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCC
Confidence 457888999999999999999877 9999999999999865
No 344
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=97.28 E-value=0.00021 Score=57.46 Aligned_cols=33 Identities=36% Similarity=0.685 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceee
Q 038318 181 DMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216 (220)
Q Consensus 181 ~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill 216 (220)
..-++..+||.||.|||... |.|||+||+|||-
T Consensus 177 EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC 209 (463)
T KOG0607|consen 177 EASRVVKDIASALDFLHTKG---IAHRDLKPENILC 209 (463)
T ss_pred HHHHHHHHHHHHHHHHhhcC---cccccCCccceee
Confidence 45678899999999999988 9999999999985
No 345
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=97.28 E-value=0.00039 Score=55.25 Aligned_cols=40 Identities=25% Similarity=0.492 Sum_probs=35.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|+.. ++|+|++|+||+++++
T Consensus 98 ~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~ 137 (277)
T cd06642 98 LEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQ 137 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCC
Confidence 347788899999999999999876 9999999999999865
No 346
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=97.28 E-value=0.00028 Score=57.58 Aligned_cols=41 Identities=29% Similarity=0.523 Sum_probs=37.0
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-++.....++.+++.|+.|+|... ++|+|+||.||+++.+
T Consensus 99 ~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~ 139 (330)
T cd07834 99 PLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSN 139 (330)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCC
Confidence 4458888999999999999999887 9999999999999865
No 347
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=97.27 E-value=0.00041 Score=54.36 Aligned_cols=39 Identities=23% Similarity=0.499 Sum_probs=34.6
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.......++.+++.|+.|+|... ++|+|+||+||+++++
T Consensus 98 ~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~ 136 (255)
T cd08219 98 PEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQN 136 (255)
T ss_pred CHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCC
Confidence 35677888999999999999877 9999999999999865
No 348
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=97.27 E-value=0.00042 Score=54.33 Aligned_cols=39 Identities=26% Similarity=0.385 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.......++.+++.|+.|+|... ++|+|++|+||+++.+
T Consensus 99 ~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~ 137 (262)
T cd06613 99 SELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTED 137 (262)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCC
Confidence 36677889999999999999877 9999999999999865
No 349
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=97.27 E-value=0.00043 Score=55.49 Aligned_cols=37 Identities=30% Similarity=0.508 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
+.....++.+++.|++|+|... ++|+|++|+||++++
T Consensus 101 ~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~ 137 (294)
T PLN00009 101 PRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDR 137 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEEC
Confidence 5666788999999999999876 999999999999974
No 350
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=97.27 E-value=0.00033 Score=55.89 Aligned_cols=40 Identities=23% Similarity=0.348 Sum_probs=35.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 121 ~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~ 160 (286)
T cd06638 121 MEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTE 160 (286)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCC
Confidence 347778889999999999999876 9999999999999865
No 351
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=97.26 E-value=0.00038 Score=55.25 Aligned_cols=41 Identities=34% Similarity=0.517 Sum_probs=36.7
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..++..+..++.+++.|+.|+|... ++|+|++++||+++++
T Consensus 94 ~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~ 134 (282)
T cd07829 94 PLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRD 134 (282)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCC
Confidence 3448889999999999999999887 9999999999999864
No 352
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.25 E-value=0.00029 Score=61.53 Aligned_cols=39 Identities=28% Similarity=0.391 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
-.+..-+|..+..||.|||+.. |++||+|..|||||.++
T Consensus 467 e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eG 505 (694)
T KOG0694|consen 467 EPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEG 505 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccC
Confidence 3445567899999999999988 99999999999999874
No 353
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=97.25 E-value=0.00043 Score=54.21 Aligned_cols=40 Identities=28% Similarity=0.478 Sum_probs=35.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|.....++.+++.+++|+|... ++|+|+||+||+++.+
T Consensus 97 ~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~ 136 (256)
T cd05112 97 FSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGEN 136 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCC
Confidence 348888899999999999999887 9999999999999764
No 354
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=97.25 E-value=0.00029 Score=56.01 Aligned_cols=39 Identities=28% Similarity=0.445 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|+|++|+||+++++
T Consensus 93 ~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~ 131 (277)
T cd05577 93 PEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDH 131 (277)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCC
Confidence 47788889999999999999877 9999999999999875
No 355
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.24 E-value=0.00044 Score=54.58 Aligned_cols=40 Identities=28% Similarity=0.363 Sum_probs=35.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|+|+||+||+++.+
T Consensus 103 ~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~ 142 (267)
T cd06645 103 LSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDN 142 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCC
Confidence 347788899999999999999887 9999999999999864
No 356
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=97.24 E-value=0.00043 Score=55.13 Aligned_cols=40 Identities=25% Similarity=0.519 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|+|++++||+++++
T Consensus 97 ~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~ 136 (288)
T cd07833 97 LPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSES 136 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCC
Confidence 457788899999999999999887 9999999999999865
No 357
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.24 E-value=0.00045 Score=56.72 Aligned_cols=41 Identities=27% Similarity=0.383 Sum_probs=34.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|+. ..++|||+||+||+++.+
T Consensus 100 ~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~ 140 (333)
T cd06650 100 IPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSR 140 (333)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCC
Confidence 34667788899999999999973 239999999999999865
No 358
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=97.23 E-value=0.00032 Score=55.12 Aligned_cols=40 Identities=30% Similarity=0.464 Sum_probs=35.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|+|++++||+++++
T Consensus 96 ~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~ 135 (264)
T cd06626 96 LDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHN 135 (264)
T ss_pred CChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCC
Confidence 447788899999999999999887 9999999999999864
No 359
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=97.23 E-value=0.00047 Score=55.27 Aligned_cols=39 Identities=36% Similarity=0.487 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+..+..++.+++.|+.|+|... ++|+|++|+||+++.+
T Consensus 99 ~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~ 137 (290)
T cd05580 99 PEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSD 137 (290)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCC
Confidence 46677888999999999999877 9999999999999865
No 360
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=97.23 E-value=0.00037 Score=56.39 Aligned_cols=37 Identities=30% Similarity=0.475 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
......++.+++.|+.|+|... ++|||+||+||++++
T Consensus 107 ~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~ 143 (316)
T cd07842 107 PSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMG 143 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcC
Confidence 5567789999999999999887 999999999999987
No 361
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=97.23 E-value=0.00043 Score=55.03 Aligned_cols=39 Identities=28% Similarity=0.445 Sum_probs=36.1
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|.....++.+++.++.|+|+.. ++|+|+++.||+++++
T Consensus 97 ~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~ 135 (283)
T cd07830 97 SESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGP 135 (283)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCC
Confidence 58899999999999999999887 9999999999999864
No 362
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=97.22 E-value=0.00039 Score=54.36 Aligned_cols=40 Identities=35% Similarity=0.416 Sum_probs=35.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|+|++++||+++++
T Consensus 99 ~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~ 138 (258)
T cd06632 99 FPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTN 138 (258)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCC
Confidence 347788889999999999999877 9999999999999865
No 363
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=97.21 E-value=0.00036 Score=55.07 Aligned_cols=41 Identities=27% Similarity=0.417 Sum_probs=36.4
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-++.....++.+++.|+.|+|... ++|+|++|+||+++++
T Consensus 109 ~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~ 149 (275)
T cd06608 109 RLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKN 149 (275)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccC
Confidence 3347788899999999999999877 9999999999999865
No 364
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=97.21 E-value=0.00047 Score=58.35 Aligned_cols=38 Identities=29% Similarity=0.583 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+-+.++.+||.|++||.+.. +||||+.+.|||++++
T Consensus 302 ~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~ 339 (468)
T KOG0197|consen 302 LPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDED 339 (468)
T ss_pred hHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccC
Confidence 6778999999999999999988 9999999999999986
No 365
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=97.21 E-value=0.00045 Score=54.12 Aligned_cols=39 Identities=26% Similarity=0.567 Sum_probs=35.2
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+....+++.+++.|+.|+|... ++|+|++++||+++.+
T Consensus 99 ~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~ 137 (256)
T cd08218 99 PEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKD 137 (256)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCC
Confidence 47788899999999999999877 9999999999999864
No 366
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.21 E-value=0.00045 Score=55.14 Aligned_cols=41 Identities=24% Similarity=0.409 Sum_probs=35.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.++.....++.+++.|+.|+|+. ..++|+|+||+||+++.+
T Consensus 99 ~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~ 139 (286)
T cd06622 99 IPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGN 139 (286)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCC
Confidence 34888899999999999999963 249999999999999864
No 367
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=97.20 E-value=0.00068 Score=55.08 Aligned_cols=41 Identities=29% Similarity=0.426 Sum_probs=36.6
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...|.....++.+++.++.|+|... ++|+|++|+||+++.+
T Consensus 117 ~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~ 157 (313)
T cd06633 117 PLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEP 157 (313)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCC
Confidence 3458888999999999999999877 9999999999999764
No 368
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=97.20 E-value=0.00043 Score=55.05 Aligned_cols=39 Identities=23% Similarity=0.419 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|+|++|+||+++.+
T Consensus 101 ~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~ 139 (280)
T cd06611 101 TEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLD 139 (280)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCC
Confidence 47788899999999999999887 9999999999999864
No 369
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=97.20 E-value=0.00043 Score=54.54 Aligned_cols=39 Identities=21% Similarity=0.327 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|++|+|... ++|+|++|+||+++++
T Consensus 100 ~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~ 138 (265)
T cd06631 100 PEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPN 138 (265)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCC
Confidence 47777889999999999999877 9999999999999864
No 370
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=97.19 E-value=0.00053 Score=54.24 Aligned_cols=40 Identities=30% Similarity=0.377 Sum_probs=35.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-++.....++.+++.|+.|+|+.. ++|+|++++||+++++
T Consensus 105 l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~ 144 (272)
T cd06629 105 FEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDAD 144 (272)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCC
Confidence 346777888999999999999876 9999999999999764
No 371
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=97.19 E-value=0.00043 Score=53.95 Aligned_cols=41 Identities=27% Similarity=0.320 Sum_probs=36.5
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.|..+..++.+++.|+.|+|... ++|+|++|+||+++.+
T Consensus 95 ~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~ 135 (254)
T cd06627 95 PFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKD 135 (254)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCC
Confidence 3458888999999999999999876 9999999999999864
No 372
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=97.19 E-value=0.00052 Score=55.62 Aligned_cols=40 Identities=30% Similarity=0.421 Sum_probs=34.3
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|+. .+++|+|+||.||+++.+
T Consensus 97 ~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~ 136 (308)
T cd06615 97 PENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSR 136 (308)
T ss_pred CHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecC
Confidence 4667788999999999999972 239999999999999865
No 373
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=97.19 E-value=0.00039 Score=55.37 Aligned_cols=39 Identities=26% Similarity=0.354 Sum_probs=34.7
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|+|++++||+++++
T Consensus 119 ~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~ 157 (282)
T cd06636 119 KEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTEN 157 (282)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCC
Confidence 36667888999999999999887 9999999999999865
No 374
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=97.17 E-value=0.00046 Score=54.17 Aligned_cols=38 Identities=39% Similarity=0.716 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+.....++.+++.|+.|+|... ++|+|++|+||+++++
T Consensus 99 ~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~ 136 (258)
T cd05578 99 EEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQ 136 (258)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCC
Confidence 6678889999999999999876 9999999999999875
No 375
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=97.17 E-value=0.00045 Score=53.97 Aligned_cols=39 Identities=33% Similarity=0.616 Sum_probs=35.1
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+....+++.+++.++.|+|... ++|+|++|+||+++++
T Consensus 99 ~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~ 137 (256)
T cd08220 99 DEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKH 137 (256)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCC
Confidence 47788899999999999999876 9999999999999753
No 376
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=97.17 E-value=0.0006 Score=54.45 Aligned_cols=41 Identities=32% Similarity=0.549 Sum_probs=36.5
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.|..+..++.+++.|+.|+|... ++|+|++|+||+++.+
T Consensus 112 ~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~ 152 (286)
T cd06614 112 RMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKD 152 (286)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCC
Confidence 3458889999999999999999876 9999999999999864
No 377
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=97.15 E-value=0.00049 Score=54.24 Aligned_cols=40 Identities=28% Similarity=0.449 Sum_probs=35.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|+|++++||+++.+
T Consensus 100 ~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~ 139 (268)
T cd06630 100 FKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDST 139 (268)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCC
Confidence 347788899999999999999887 9999999999999754
No 378
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=97.14 E-value=0.0005 Score=54.96 Aligned_cols=39 Identities=26% Similarity=0.435 Sum_probs=34.7
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.++++++.|+|... ++|+|++|+||+++++
T Consensus 103 ~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~ 141 (288)
T cd05583 103 TESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSE 141 (288)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCC
Confidence 46777888999999999999876 9999999999999865
No 379
>PRK10345 hypothetical protein; Provisional
Probab=97.14 E-value=0.00042 Score=53.27 Aligned_cols=32 Identities=28% Similarity=0.479 Sum_probs=26.2
Q ss_pred HHHHHHHHHH-HHHhhCCCCceEeeCCCCCceeecC
Q 038318 184 NIMIDVALIL-EYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 184 ~i~~~ia~~l-~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
.++.++..++ +|+|... |+|||+||+||+++.
T Consensus 108 ~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~ 140 (210)
T PRK10345 108 AQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQR 140 (210)
T ss_pred HHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEec
Confidence 3455666666 9999988 999999999999963
No 380
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=97.14 E-value=0.00048 Score=63.87 Aligned_cols=42 Identities=26% Similarity=0.445 Sum_probs=35.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCC----CceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHS----TLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~----~~i~h~dlk~~nill~~ 218 (220)
-.+...+.++.+++.||.|||.... .+|+||||||+||+++.
T Consensus 115 L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s 160 (1021)
T PTZ00266 115 IEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLST 160 (1021)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeec
Confidence 3477888999999999999998532 45999999999999964
No 381
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=97.13 E-value=0.0005 Score=54.55 Aligned_cols=40 Identities=28% Similarity=0.451 Sum_probs=35.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.|.....++.+++.|+.|+|... ++|+|++|+||+++++
T Consensus 98 l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~ 137 (277)
T cd06917 98 IAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNT 137 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCC
Confidence 347888899999999999999887 9999999999999864
No 382
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=97.13 E-value=0.00064 Score=53.41 Aligned_cols=40 Identities=30% Similarity=0.499 Sum_probs=35.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+|.....++.+++.|+.|+|... ++|+|++|+||+++++
T Consensus 99 ~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~ 138 (267)
T cd06610 99 LDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGED 138 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCC
Confidence 347788889999999999999877 9999999999999865
No 383
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=97.13 E-value=0.00066 Score=52.89 Aligned_cols=40 Identities=30% Similarity=0.643 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.++.....++.+++.|+.|+|... ++|+|++++||+++++
T Consensus 100 ~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~ 139 (258)
T cd08215 100 FPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSN 139 (258)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCC
Confidence 347889999999999999999886 9999999999999864
No 384
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=97.12 E-value=0.00057 Score=52.95 Aligned_cols=41 Identities=27% Similarity=0.463 Sum_probs=36.5
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.|.....++.+++.++.|+|... ++|+|++|+||+++++
T Consensus 94 ~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~ 134 (253)
T cd05122 94 TLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSD 134 (253)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccC
Confidence 3458888999999999999999876 9999999999999865
No 385
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=97.11 E-value=0.00053 Score=55.02 Aligned_cols=36 Identities=25% Similarity=0.508 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 181 DMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 181 ~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
....+..++..|..|+|... |+|||+||+||++..+
T Consensus 119 tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~ 154 (369)
T KOG0665|consen 119 TISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSD 154 (369)
T ss_pred HHHHHHHHHHHHHHHHHhcc---eeecccCcccceecch
Confidence 44677899999999999888 9999999999998654
No 386
>PRK12274 serine/threonine protein kinase; Provisional
Probab=97.10 E-value=0.00061 Score=52.21 Aligned_cols=33 Identities=27% Similarity=0.391 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhhCCCCceEeeCC-CCCceeecCC
Q 038318 184 NIMIDVALILEYVHHDHSTLMVHCDL-KPDNILIDEN 219 (220)
Q Consensus 184 ~i~~~ia~~l~~lh~~~~~~i~h~dl-k~~nill~~~ 219 (220)
.+..++..++.++|... ++|||+ ||+||+++++
T Consensus 95 ~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~ 128 (218)
T PRK12274 95 AYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQED 128 (218)
T ss_pred HHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCC
Confidence 45667788999999887 999999 7999999765
No 387
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=97.10 E-value=0.00054 Score=56.45 Aligned_cols=40 Identities=28% Similarity=0.507 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|+|+||+||+++++
T Consensus 115 l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~ 154 (343)
T cd07851 115 LSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNED 154 (343)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCC
Confidence 458888999999999999999876 9999999999999864
No 388
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=97.10 E-value=0.00057 Score=55.01 Aligned_cols=40 Identities=25% Similarity=0.449 Sum_probs=35.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|.....++.+++.|+.|+|... ++|+|++|+||+++++
T Consensus 113 ~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~ 152 (292)
T cd06657 113 MNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHD 152 (292)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCC
Confidence 347788899999999999999876 9999999999999875
No 389
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=97.10 E-value=0.00044 Score=53.24 Aligned_cols=34 Identities=29% Similarity=0.580 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 183 LNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 183 ~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-+..++.+||.|.|+.+ |.|||+||+|+++|..
T Consensus 135 ryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~ 168 (338)
T KOG0668|consen 135 RYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHE 168 (338)
T ss_pred HHHHHHHHHHHhHHHhcC---cccccCCcceeeechh
Confidence 345678899999999888 9999999999999853
No 390
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=97.09 E-value=0.00055 Score=53.85 Aligned_cols=39 Identities=33% Similarity=0.533 Sum_probs=34.6
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|+|++++||+++.+
T Consensus 91 ~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~ 129 (262)
T cd05572 91 DEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSN 129 (262)
T ss_pred CHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCC
Confidence 36677888999999999999876 9999999999999865
No 391
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=97.09 E-value=0.00064 Score=55.07 Aligned_cols=39 Identities=28% Similarity=0.463 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|+|++|+||+++.+
T Consensus 113 ~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~ 151 (308)
T cd06634 113 QEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEP 151 (308)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCC
Confidence 46778889999999999999876 9999999999999865
No 392
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=97.09 E-value=0.00037 Score=54.86 Aligned_cols=34 Identities=32% Similarity=0.640 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceee
Q 038318 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216 (220)
Q Consensus 180 ~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill 216 (220)
..-.+++.+.+.|++|||+.. ++|||+|.+|||+
T Consensus 121 ~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLi 154 (378)
T KOG1345|consen 121 ANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILI 154 (378)
T ss_pred HHHHHHHHHHHHHHHHhhccc---hhhcccccceEEE
Confidence 345678899999999999998 9999999999998
No 393
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=97.08 E-value=0.00091 Score=52.04 Aligned_cols=39 Identities=33% Similarity=0.526 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|+|++|+||+++.+
T Consensus 91 ~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~ 129 (250)
T cd05123 91 SEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDAD 129 (250)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCC
Confidence 47788899999999999999877 9999999999999865
No 394
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=97.08 E-value=0.00061 Score=55.99 Aligned_cols=40 Identities=28% Similarity=0.494 Sum_probs=35.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|+.. ++|||+||+||+++.+
T Consensus 105 l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~ 144 (337)
T cd07858 105 LSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNAN 144 (337)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCC
Confidence 347788899999999999999887 9999999999999864
No 395
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=97.08 E-value=0.00057 Score=53.18 Aligned_cols=41 Identities=27% Similarity=0.376 Sum_probs=36.7
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+|..+..++.+++.++.|+|+.. ++|+|++|+||+++.+
T Consensus 97 ~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~ 137 (260)
T cd06606 97 KLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSD 137 (260)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCC
Confidence 4458889999999999999999876 9999999999999864
No 396
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.07 E-value=0.00042 Score=54.63 Aligned_cols=34 Identities=29% Similarity=0.603 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 183 LNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 183 ~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-+..+|.+|+.|||+.. |.|||+||.|.|++.+
T Consensus 159 KVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSN 192 (449)
T KOG0664|consen 159 KVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSN 192 (449)
T ss_pred hhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccC
Confidence 345789999999999988 9999999999998764
No 397
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=97.06 E-value=0.0007 Score=53.46 Aligned_cols=39 Identities=36% Similarity=0.744 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHHHHHHHHHhh-CCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHH-DHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~-~~~~~i~h~dlk~~nill~~~ 219 (220)
.+...++++.+++.|+.|+|. .. ++|+|+++.||+++.+
T Consensus 111 ~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~ 150 (269)
T cd08528 111 TEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGED 150 (269)
T ss_pred CHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCC
Confidence 466789999999999999995 44 9999999999999865
No 398
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=97.06 E-value=0.00058 Score=53.09 Aligned_cols=36 Identities=33% Similarity=0.616 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 180 ~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
...-.+..++..++.|.|... |+|||+||+|++|..
T Consensus 110 a~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLAS 145 (355)
T KOG0033|consen 110 ADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLAS 145 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeee
Confidence 355677889999999999988 999999999999853
No 399
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=97.04 E-value=0.00088 Score=52.26 Aligned_cols=40 Identities=30% Similarity=0.436 Sum_probs=35.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|...+.++.+++.|+.|+|... ++|+|++++||+++++
T Consensus 100 ~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~ 139 (256)
T cd08530 100 IPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVAN 139 (256)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecC
Confidence 347888999999999999999877 9999999999999864
No 400
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=97.03 E-value=0.00079 Score=53.27 Aligned_cols=41 Identities=34% Similarity=0.579 Sum_probs=36.7
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...|.....++.+++.|+.|+|... ++|+|++++||+++.+
T Consensus 98 ~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~ 138 (280)
T cd05581 98 SLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKD 138 (280)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCC
Confidence 3458889999999999999999877 9999999999999865
No 401
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=97.03 E-value=0.0006 Score=56.15 Aligned_cols=39 Identities=28% Similarity=0.465 Sum_probs=34.8
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
..+.....++.+++.|+.|+|... ++|||+|++||+++.
T Consensus 111 l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~ 149 (342)
T cd07854 111 LSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINT 149 (342)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcC
Confidence 347778889999999999999887 999999999999974
No 402
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=97.02 E-value=0.0007 Score=58.44 Aligned_cols=38 Identities=39% Similarity=0.651 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 180 ~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
...-.++.++..|++|+|..+ |+|||+|.+|++||+++
T Consensus 155 ~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~m 192 (596)
T KOG0586|consen 155 KEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENM 192 (596)
T ss_pred hhhhhhhHHHHHHHHHHhhcc---eeccccchhhccccccc
Confidence 344556778999999999999 99999999999999874
No 403
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=97.02 E-value=0.0006 Score=54.41 Aligned_cols=37 Identities=32% Similarity=0.595 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
-...-.|..+|+.|+.|+|... |.|||+||+|+|...
T Consensus 160 Erea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~ 196 (400)
T KOG0604|consen 160 EREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTT 196 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeec
Confidence 3456789999999999999888 999999999999854
No 404
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=97.01 E-value=0.00074 Score=53.11 Aligned_cols=39 Identities=31% Similarity=0.505 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHHHHHHHHHhh-CCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHH-DHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~-~~~~~i~h~dlk~~nill~~~ 219 (220)
.......++.+++.|++|+|. .. ++|+|+||+||+++++
T Consensus 98 ~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~ 137 (265)
T cd06605 98 PERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSR 137 (265)
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCC
Confidence 356677899999999999998 55 9999999999999875
No 405
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=97.01 E-value=0.00066 Score=53.23 Aligned_cols=40 Identities=30% Similarity=0.522 Sum_probs=35.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhh-CCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHH-DHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~-~~~~~i~h~dlk~~nill~~~ 219 (220)
.++.....++.++++|+.|+|. .. ++|+|++|+||+++.+
T Consensus 96 l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~ 136 (264)
T cd06623 96 IPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSK 136 (264)
T ss_pred CCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCC
Confidence 3477888999999999999998 66 9999999999999865
No 406
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=97.01 E-value=0.00072 Score=53.60 Aligned_cols=41 Identities=34% Similarity=0.525 Sum_probs=36.6
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.+.....++.+++.|+.|+|... ++|+|++|+||+++++
T Consensus 94 ~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~ 134 (274)
T cd06609 94 KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEE 134 (274)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCC
Confidence 3358888999999999999999877 9999999999999865
No 407
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=97.01 E-value=0.0008 Score=57.32 Aligned_cols=35 Identities=34% Similarity=0.547 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 183 LNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 183 ~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
.-++.++..|++-+|... ++||||||.|+|+|..+
T Consensus 244 rfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~G 278 (550)
T KOG0605|consen 244 RFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKG 278 (550)
T ss_pred HHHHHHHHHHHHHHHHcC---cccccCChhheeecCCC
Confidence 445667788999999988 99999999999999764
No 408
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=97.00 E-value=0.00078 Score=55.20 Aligned_cols=40 Identities=28% Similarity=0.386 Sum_probs=35.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|+|++++||+++.+
T Consensus 116 ~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~ 155 (335)
T PTZ00024 116 LTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSK 155 (335)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCC
Confidence 346778899999999999999877 9999999999999765
No 409
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=96.99 E-value=0.0012 Score=59.38 Aligned_cols=97 Identities=24% Similarity=0.249 Sum_probs=56.2
Q ss_pred CCCCCCceecCCCccCC-ccChhhhccccCCeeeccCCCCCCCCChhhhcCccC---------------hhhhcCCCCCC
Q 038318 4 SLTYLRTPHLGSNNLTS-SISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL---------------VDCFGSLTSLE 67 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L---------------p~~~~~l~~L~ 67 (220)
.||.|++|.+++-.+.. +.-.-..++++|..||+|+-+++ .+ .++++|++| -..+..|++|+
T Consensus 146 ~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~-nl-~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~ 223 (699)
T KOG3665|consen 146 MLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNIS-NL-SGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLR 223 (699)
T ss_pred hCcccceEEecCceecchhHHHHhhccCccceeecCCCCcc-Cc-HHHhccccHHHHhccCCCCCchhhHHHHhcccCCC
Confidence 36677777777655542 22233456777788888877776 33 555555555 12456677777
Q ss_pred EEeccCCcccccC--C----ccccCCCCCCeeeccCCcccc
Q 038318 68 FLDISNNNLFGKI--P----KSFKGLSRLKQLNAAHSKLEE 102 (220)
Q Consensus 68 ~L~ls~N~l~~~~--p----~~~~~l~~L~~l~l~~n~l~~ 102 (220)
.||+|........ . +.-..++.|+.||.|+..+..
T Consensus 224 vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~ 264 (699)
T KOG3665|consen 224 VLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINE 264 (699)
T ss_pred eeeccccccccchHHHHHHHHhcccCccccEEecCCcchhH
Confidence 7777765443211 0 111236677777777665554
No 410
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=96.98 E-value=0.0009 Score=53.20 Aligned_cols=40 Identities=25% Similarity=0.538 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-+|.....++.+++.++.|+|+.. ++|+|++|+||+++.+
T Consensus 98 ~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~ 137 (277)
T cd06641 98 LDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEH 137 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCC
Confidence 348888999999999999999877 9999999999999865
No 411
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=96.98 E-value=0.0009 Score=52.55 Aligned_cols=39 Identities=26% Similarity=0.492 Sum_probs=35.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
.+|.....++.+++.|+.|+|+.. ++|+|++++||+++.
T Consensus 103 ~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~ 141 (260)
T cd08222 103 LSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN 141 (260)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec
Confidence 458889999999999999999876 999999999999874
No 412
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=96.98 E-value=0.00028 Score=33.53 Aligned_cols=18 Identities=67% Similarity=1.058 Sum_probs=8.5
Q ss_pred CCEEeccCCcccccCCccc
Q 038318 66 LEFLDISNNNLFGKIPKSF 84 (220)
Q Consensus 66 L~~L~ls~N~l~~~~p~~~ 84 (220)
|++||+++|+++ .+|++|
T Consensus 2 L~~Ldls~n~l~-~ip~~~ 19 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSSF 19 (22)
T ss_dssp ESEEEETSSEES-EEGTTT
T ss_pred ccEEECCCCcCE-eCChhh
Confidence 444555555554 444433
No 413
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=96.96 E-value=0.001 Score=52.94 Aligned_cols=39 Identities=23% Similarity=0.520 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|++|+|+.. ++|+|++|+||+++.+
T Consensus 99 ~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~ 137 (277)
T cd06640 99 DEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQ 137 (277)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCC
Confidence 35667788899999999999876 9999999999999865
No 414
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=96.95 E-value=0.001 Score=53.44 Aligned_cols=40 Identities=25% Similarity=0.517 Sum_probs=35.8
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+..+..++.+++.|+.|+|... ++|+|++++||+++.+
T Consensus 112 l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~ 151 (293)
T cd06647 112 MDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMD 151 (293)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCC
Confidence 347788999999999999999877 9999999999999764
No 415
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=96.93 E-value=0.00084 Score=52.67 Aligned_cols=31 Identities=26% Similarity=0.491 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 186 MIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 186 ~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+.+++.++.++|... ++|||+||.||+++.+
T Consensus 148 ~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~ 178 (239)
T PRK01723 148 WQAIGQLIARFHDAG---VYHADLNAHNILLDPD 178 (239)
T ss_pred HHHHHHHHHHHHHCC---CCCCCCCchhEEEcCC
Confidence 567889999999888 9999999999999764
No 416
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=96.92 E-value=0.0012 Score=58.10 Aligned_cols=35 Identities=34% Similarity=0.654 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 180 ~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
..-+.+..++..|+.|||+.. |+|||+||.||++-
T Consensus 120 ~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~ 154 (732)
T KOG4250|consen 120 SEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQ 154 (732)
T ss_pred HHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEe
Confidence 356777889999999999888 99999999999984
No 417
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=96.92 E-value=0.0015 Score=54.38 Aligned_cols=39 Identities=31% Similarity=0.536 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
-.....++.+|..|+.|.|... ++|||+|.+|||||.++
T Consensus 152 ErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~ 190 (668)
T KOG0611|consen 152 EREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNN 190 (668)
T ss_pred HHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCC
Confidence 3455678999999999999888 99999999999999763
No 418
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=96.91 E-value=0.0005 Score=59.36 Aligned_cols=35 Identities=31% Similarity=0.451 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 181 DMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 181 ~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
....+..+||.|+.|||... |||||+|+-|||+..
T Consensus 213 llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~ 247 (904)
T KOG4721|consen 213 LLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISY 247 (904)
T ss_pred HHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeec
Confidence 34677789999999999888 999999999999853
No 419
>PRK15386 type III secretion protein GogB; Provisional
Probab=96.89 E-value=0.0026 Score=53.46 Aligned_cols=31 Identities=10% Similarity=0.087 Sum_probs=17.5
Q ss_pred CCCCCceecCCCccCCccChhhhccccCCeeeccC
Q 038318 5 LTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSS 39 (220)
Q Consensus 5 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~ 39 (220)
+.+++.|++++|.++ .+|. + ..+|+.|.+++
T Consensus 51 ~~~l~~L~Is~c~L~-sLP~-L--P~sLtsL~Lsn 81 (426)
T PRK15386 51 ARASGRLYIKDCDIE-SLPV-L--PNELTEITIEN 81 (426)
T ss_pred hcCCCEEEeCCCCCc-ccCC-C--CCCCcEEEccC
Confidence 466777777777766 5551 1 22355555544
No 420
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=96.88 E-value=0.0012 Score=52.72 Aligned_cols=41 Identities=27% Similarity=0.400 Sum_probs=35.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|.....++.+++.++.|+|+. ..++|+|+||+||+++++
T Consensus 100 ~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~ 140 (284)
T cd06620 100 IPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSR 140 (284)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCC
Confidence 34788889999999999999963 239999999999999865
No 421
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=96.88 E-value=0.0011 Score=58.10 Aligned_cols=33 Identities=39% Similarity=0.657 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 185 IMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 185 i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
++.+++.|+++.|.-. .|||||||.|||+|.|+
T Consensus 734 YIAEltcAiesVHkmG---FIHRDiKPDNILIDrdG 766 (1034)
T KOG0608|consen 734 YIAELTCAIESVHKMG---FIHRDIKPDNILIDRDG 766 (1034)
T ss_pred HHHHHHHHHHHHHhcc---ceecccCccceEEccCC
Confidence 3456789999999776 99999999999999875
No 422
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=96.88 E-value=0.0011 Score=52.92 Aligned_cols=39 Identities=31% Similarity=0.468 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|+|+++.||+++++
T Consensus 103 ~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~ 141 (287)
T cd06621 103 GEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRK 141 (287)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecC
Confidence 36678899999999999999877 9999999999999865
No 423
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=96.87 E-value=0.0012 Score=50.06 Aligned_cols=35 Identities=20% Similarity=0.298 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 182 MLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 182 r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...++.+++.++.++|... ++|+|+||+||+++++
T Consensus 127 ~~~~~~~i~~~l~~lh~~g---i~H~Dl~p~Nill~~~ 161 (198)
T cd05144 127 PEEVLDEILEEIVKAYKHG---IIHGDLSEFNILVDDD 161 (198)
T ss_pred HHHHHHHHHHHHHHHHHCC---CCcCCCCcccEEEcCC
Confidence 3567788889999999866 9999999999999865
No 424
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=96.81 E-value=0.0008 Score=57.48 Aligned_cols=39 Identities=28% Similarity=0.413 Sum_probs=36.3
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.++..++.++|.|++|||... ++||||-..|.|++.+
T Consensus 260 ~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~ 298 (474)
T KOG0194|consen 260 PTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKK 298 (474)
T ss_pred CHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCC
Confidence 38899999999999999999988 9999999999999874
No 425
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=96.81 E-value=0.0012 Score=56.61 Aligned_cols=31 Identities=39% Similarity=0.950 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 185 IMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 185 i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
.+.+|..||.|||... |+|+|+||+||||..
T Consensus 669 lvtQIL~ALr~LH~kn---IvHCDLKPENVLLas 699 (888)
T KOG4236|consen 669 LVTQILVALRYLHFKN---IVHCDLKPENVLLAS 699 (888)
T ss_pred HHHHHHHHHHHhhhcc---eeeccCCchheeecc
Confidence 4678999999999998 999999999999964
No 426
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.81 E-value=0.0008 Score=58.39 Aligned_cols=37 Identities=30% Similarity=0.446 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 181 DMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 181 ~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
.-..|..|...||.|||+.. .||||||..||||.+.+
T Consensus 127 EIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g 163 (948)
T KOG0577|consen 127 EIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPG 163 (948)
T ss_pred HHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCC
Confidence 34667789999999999888 99999999999998763
No 427
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=96.79 E-value=0.0012 Score=59.21 Aligned_cols=33 Identities=39% Similarity=0.587 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 183 LNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 183 ~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
.....+++.|+++||... |+|||+||.|||++.
T Consensus 609 ~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~ 641 (903)
T KOG1027|consen 609 ISVLSQIASGLAHLHSLK---IVHRDLKPQNILISV 641 (903)
T ss_pred HHHHHHHHHHHHHHHhcc---cccccCCCceEEEEc
Confidence 456778899999999877 999999999999975
No 428
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.79 E-value=0.00096 Score=52.00 Aligned_cols=87 Identities=18% Similarity=0.214 Sum_probs=60.5
Q ss_pred cChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCC--cccccCCccccCCCCCCeeeccCCc
Q 038318 22 ISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNN--NLFGKIPKSFKGLSRLKQLNAAHSK 99 (220)
Q Consensus 22 ~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N--~l~~~~p~~~~~l~~L~~l~l~~n~ 99 (220)
+..-.-.+..|+.|.+.+-.++ ++- .+..|++|+.|.+|.| ..++.++.-...+++|++++++.|+
T Consensus 35 ~~gl~d~~~~le~ls~~n~glt-t~~-----------~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nk 102 (260)
T KOG2739|consen 35 LGGLTDEFVELELLSVINVGLT-TLT-----------NFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNK 102 (260)
T ss_pred cccccccccchhhhhhhcccee-ecc-----------cCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCc
Confidence 4444455666777776666665 221 3456889999999999 6666666656677999999999999
Q ss_pred ccccCCCC---cccccccccccccc
Q 038318 100 LEEEIPIE---RPLRNILAQSFIWN 121 (220)
Q Consensus 100 l~~~~p~~---~~~~~l~~l~~~~n 121 (220)
+.. +.+. ..+.+|..+++..+
T Consensus 103 i~~-lstl~pl~~l~nL~~Ldl~n~ 126 (260)
T KOG2739|consen 103 IKD-LSTLRPLKELENLKSLDLFNC 126 (260)
T ss_pred ccc-ccccchhhhhcchhhhhcccC
Confidence 983 2222 56667777777555
No 429
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=96.77 E-value=0.0029 Score=57.05 Aligned_cols=37 Identities=30% Similarity=0.532 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
-+..+.+..+||+|+.|||... ++|||+-..|+|+.+
T Consensus 797 sq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVks 833 (1177)
T KOG1025|consen 797 SQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKS 833 (1177)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecC
Confidence 4455789999999999999887 999999999999864
No 430
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=96.75 E-value=0.0017 Score=53.20 Aligned_cols=39 Identities=41% Similarity=0.581 Sum_probs=34.4
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|||++|+||+++++
T Consensus 106 ~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~ 144 (328)
T cd07856 106 EKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINEN 144 (328)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCC
Confidence 36667788999999999999887 9999999999999864
No 431
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=96.71 E-value=0.0016 Score=54.69 Aligned_cols=37 Identities=32% Similarity=0.549 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
-.....++.+++.++.|+|... ++|||+||+|+++..
T Consensus 134 E~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~ 170 (382)
T KOG0032|consen 134 ERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLAS 170 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeecc
Confidence 3466788999999999999877 999999999999854
No 432
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=96.67 E-value=0.0025 Score=47.55 Aligned_cols=39 Identities=38% Similarity=0.735 Sum_probs=35.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
.++..+..++.++++++.|+|... ++|+|+++.||+++.
T Consensus 89 ~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~ 127 (215)
T cd00180 89 LSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDS 127 (215)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeC
Confidence 347889999999999999999886 999999999999986
No 433
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=96.67 E-value=0.0023 Score=55.35 Aligned_cols=38 Identities=32% Similarity=0.610 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.....++.+...||.|||... |+|||+||.|||++..
T Consensus 99 Ee~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~ 136 (808)
T KOG0597|consen 99 EEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKG 136 (808)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCC
Confidence 4567889999999999999888 9999999999999865
No 434
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=96.66 E-value=0.0036 Score=44.33 Aligned_cols=40 Identities=30% Similarity=0.453 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
+..+..++..++.++.++|......++|+|+++.|+++++
T Consensus 85 ~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~ 124 (155)
T cd05120 85 EEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD 124 (155)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC
Confidence 4567788899999999999876677999999999999976
No 435
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=96.66 E-value=0.0017 Score=56.98 Aligned_cols=37 Identities=22% Similarity=0.415 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
+..+..++.++++++.|+|... ++|||+||+||++++
T Consensus 427 l~~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl~~ 463 (535)
T PRK09605 427 LEGNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIVRD 463 (535)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEEEC
Confidence 3346788999999999999887 999999999999954
No 436
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=96.66 E-value=0.0012 Score=55.45 Aligned_cols=37 Identities=27% Similarity=0.625 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 180 ~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+-.++..++..|+.|+|... |+|||+|+.||++..+
T Consensus 106 ~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~ 142 (426)
T KOG0589|consen 106 ERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKD 142 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhcccc
Confidence 355788999999999999887 9999999999999754
No 437
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=96.63 E-value=0.00098 Score=59.96 Aligned_cols=81 Identities=16% Similarity=0.217 Sum_probs=50.2
Q ss_pred CCCCceecCCCccC-CccChhhhc-cccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCcc
Q 038318 6 TYLRTPHLGSNNLT-SSISLSLWN-VECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKS 83 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~-g~~p~~~~~-l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~ 83 (220)
.+|++||+++...- ...|..++. +|+|+.|.+++=.+... +|.. ...++++|..||+|+.+++.. ..
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~---dF~~------lc~sFpNL~sLDIS~TnI~nl--~G 190 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDND---DFSQ------LCASFPNLRSLDISGTNISNL--SG 190 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecch---hHHH------HhhccCccceeecCCCCccCc--HH
Confidence 46888999886533 234444544 89999999988776422 2322 345778888888888777621 33
Q ss_pred ccCCCCCCeeeccC
Q 038318 84 FKGLSRLKQLNAAH 97 (220)
Q Consensus 84 ~~~l~~L~~l~l~~ 97 (220)
++.+++|+.|.+.+
T Consensus 191 IS~LknLq~L~mrn 204 (699)
T KOG3665|consen 191 ISRLKNLQVLSMRN 204 (699)
T ss_pred HhccccHHHHhccC
Confidence 44444444444443
No 438
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=96.60 E-value=0.00031 Score=56.88 Aligned_cols=91 Identities=23% Similarity=0.356 Sum_probs=44.9
Q ss_pred CCCCCceecCCCccCCc----cChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCccccc-
Q 038318 5 LTYLRTPHLGSNNLTSS----ISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGK- 79 (220)
Q Consensus 5 l~~L~~L~Ls~n~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~- 79 (220)
=+.|+++....|++... +...|...+.|+.+.++.|.+. |..+-- +-..+..+++|+.||+.+|.|+-.
T Consensus 156 ~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~---~eG~~a---l~eal~~~~~LevLdl~DNtft~eg 229 (382)
T KOG1909|consen 156 KPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIR---PEGVTA---LAEALEHCPHLEVLDLRDNTFTLEG 229 (382)
T ss_pred CcceEEEEeeccccccccHHHHHHHHHhccccceEEEeccccc---CchhHH---HHHHHHhCCcceeeecccchhhhHH
Confidence 34566666666666511 1223455566666666666543 221100 012445556666666666655421
Q ss_pred ---CCccccCCCCCCeeeccCCccc
Q 038318 80 ---IPKSFKGLSRLKQLNAAHSKLE 101 (220)
Q Consensus 80 ---~p~~~~~l~~L~~l~l~~n~l~ 101 (220)
+...+..+++|+.++++++.+.
T Consensus 230 s~~LakaL~s~~~L~El~l~dcll~ 254 (382)
T KOG1909|consen 230 SVALAKALSSWPHLRELNLGDCLLE 254 (382)
T ss_pred HHHHHHHhcccchheeecccccccc
Confidence 1223444555666666665554
No 439
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=96.59 E-value=0.0021 Score=60.30 Aligned_cols=33 Identities=39% Similarity=0.551 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 184 NIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 184 ~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-+..+.+.|+.|||+.+ |+|||+|+.||+||..
T Consensus 1338 vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~ 1370 (1509)
T KOG4645|consen 1338 VYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFN 1370 (1509)
T ss_pred HHHHHHHHHHHHHHhcC---ceecCCCccceeeecC
Confidence 34567889999999988 9999999999999865
No 440
>smart00090 RIO RIO-like kinase.
Probab=96.59 E-value=0.0031 Score=49.37 Aligned_cols=35 Identities=23% Similarity=0.328 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 181 DMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 181 ~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
....++.+++.++.|+|... .++|||+||+||+++
T Consensus 149 ~~~~i~~qi~~~l~~LH~~g--~iiH~Dikp~NIli~ 183 (237)
T smart00090 149 EEFELYDDILEEMRKLYKEG--ELVHGDLSEYNILVH 183 (237)
T ss_pred HHHHHHHHHHHHHHHHHhcC--CEEeCCCChhhEEEE
Confidence 34678899999999999653 399999999999997
No 441
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=96.58 E-value=0.002 Score=48.14 Aligned_cols=34 Identities=26% Similarity=0.363 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHhh-CCCCceEeeCCCCCceeec
Q 038318 181 DMLNIMIDVALILEYVHH-DHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 181 ~r~~i~~~ia~~l~~lh~-~~~~~i~h~dlk~~nill~ 217 (220)
....++.+++.++.++|. .. ++|+|+||+||+++
T Consensus 115 ~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~ 149 (187)
T cd05119 115 DPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD 149 (187)
T ss_pred cHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE
Confidence 456778889999999998 55 99999999999997
No 442
>PRK14879 serine/threonine protein kinase; Provisional
Probab=96.57 E-value=0.0027 Score=48.40 Aligned_cols=34 Identities=18% Similarity=0.469 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 181 DMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 181 ~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
.+..++.+++.++.++|... ++|+|++|.||+++
T Consensus 96 ~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~ 129 (211)
T PRK14879 96 EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS 129 (211)
T ss_pred HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE
Confidence 67888999999999999887 99999999999996
No 443
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.57 E-value=0.0015 Score=52.85 Aligned_cols=33 Identities=30% Similarity=0.499 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 185 IMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 185 i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
+...|..||.|||+.. |+.||+|.+|.+||.|+
T Consensus 273 YGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDG 305 (516)
T KOG0690|consen 273 YGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDG 305 (516)
T ss_pred hhHHHHHHhhhhhhCC---eeeeechhhhheeccCC
Confidence 4667889999999988 99999999999999875
No 444
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=96.51 E-value=0.0033 Score=48.22 Aligned_cols=40 Identities=35% Similarity=0.582 Sum_probs=35.8
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.++.....++.+++.++.|+|... ++|+|++++||+++++
T Consensus 84 ~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~ 123 (244)
T smart00220 84 LSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDED 123 (244)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCC
Confidence 347788999999999999999886 9999999999999864
No 445
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=96.48 E-value=0.0025 Score=49.83 Aligned_cols=42 Identities=26% Similarity=0.486 Sum_probs=35.2
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
+.+...-.++..+...||.|+|... |+|||+|+.|+|++.|+
T Consensus 120 r~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dg 161 (376)
T KOG0669|consen 120 RFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDG 161 (376)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCc
Confidence 3345566777888889999999887 99999999999999863
No 446
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=96.47 E-value=0.0084 Score=52.16 Aligned_cols=36 Identities=28% Similarity=0.412 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 182 MLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 182 r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
-.+|+.+||.|+.||.+.. ++|||+.+.|+|.|+++
T Consensus 639 ~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~ 674 (807)
T KOG1094|consen 639 GVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEF 674 (807)
T ss_pred hHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcc
Confidence 3679999999999999888 99999999999999874
No 447
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.45 E-value=0.0025 Score=52.24 Aligned_cols=40 Identities=28% Similarity=0.460 Sum_probs=35.0
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
+.+-...+.++.++..+++++|... .+|||+||.|+.+..
T Consensus 118 ~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~ 157 (322)
T KOG1164|consen 118 RFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQ 157 (322)
T ss_pred CcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecC
Confidence 3345688999999999999999888 999999999999864
No 448
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=96.40 E-value=0.0011 Score=52.27 Aligned_cols=96 Identities=18% Similarity=0.257 Sum_probs=65.3
Q ss_pred CCCCCceecCCCccCCc----cChhhhccccCCeeeccCCCCCCCCChhhh-cCccChhhhcCCCCCCEEeccCCccccc
Q 038318 5 LTYLRTPHLGSNNLTSS----ISLSLWNVECILYIDLSSNSLSGFLPSNIE-KLKVLVDCFGSLTSLEFLDISNNNLFGK 79 (220)
Q Consensus 5 l~~L~~L~Ls~n~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~Lp~~~~~l~~L~~L~ls~N~l~~~ 79 (220)
+..++.++||+|.|..+ +...+.+-.+|+..++|.-. +|..-+.+. +|.-|-..+-.++.|+..++|+|.+...
T Consensus 29 ~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~f-tgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~ 107 (388)
T COG5238 29 MDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAF-TGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSE 107 (388)
T ss_pred hcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhh-hcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCcc
Confidence 45677788888887633 33345566777777777643 344333321 2222234677899999999999999877
Q ss_pred CCccc----cCCCCCCeeeccCCccc
Q 038318 80 IPKSF----KGLSRLKQLNAAHSKLE 101 (220)
Q Consensus 80 ~p~~~----~~l~~L~~l~l~~n~l~ 101 (220)
.|..+ ++-+.|.+|.+++|.+.
T Consensus 108 ~~e~L~d~is~~t~l~HL~l~NnGlG 133 (388)
T COG5238 108 FPEELGDLISSSTDLVHLKLNNNGLG 133 (388)
T ss_pred cchHHHHHHhcCCCceeEEeecCCCC
Confidence 77654 45678999999999874
No 449
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=96.40 E-value=0.0018 Score=28.58 Aligned_cols=13 Identities=54% Similarity=0.611 Sum_probs=5.6
Q ss_pred CCCceecCCCccC
Q 038318 7 YLRTPHLGSNNLT 19 (220)
Q Consensus 7 ~L~~L~Ls~n~l~ 19 (220)
+|+.|+|++|+++
T Consensus 2 ~L~~L~l~~n~L~ 14 (17)
T PF13504_consen 2 NLRTLDLSNNRLT 14 (17)
T ss_dssp T-SEEEETSS--S
T ss_pred ccCEEECCCCCCC
Confidence 4555555555554
No 450
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.40 E-value=0.00087 Score=53.52 Aligned_cols=40 Identities=28% Similarity=0.336 Sum_probs=29.1
Q ss_pred CCCCCceecCCCccCC--ccChhhhccccCCeeeccCCCCCC
Q 038318 5 LTYLRTPHLGSNNLTS--SISLSLWNVECILYIDLSSNSLSG 44 (220)
Q Consensus 5 l~~L~~L~Ls~n~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g 44 (220)
.+.++.|||.+|.++. ++-.-+.+|+.|++|+++.|+++.
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s 111 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSS 111 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCC
Confidence 4567788888888873 334445678888888888888873
No 451
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=96.39 E-value=0.0064 Score=51.26 Aligned_cols=38 Identities=29% Similarity=0.530 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
-.....|+.+|..||.||.+- .|||+|.|+||.||||.
T Consensus 567 EKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv 604 (775)
T KOG1151|consen 567 EKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLV 604 (775)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEe
Confidence 345678999999999999976 89999999999999984
No 452
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.38 E-value=0.0048 Score=48.03 Aligned_cols=36 Identities=33% Similarity=0.617 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
-...+-.|.++...++|+|..+ .+|||+||.|.|..
T Consensus 110 mkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMG 145 (341)
T KOG1163|consen 110 MKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMG 145 (341)
T ss_pred HHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeec
Confidence 4467788999999999999999 99999999999863
No 453
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=96.35 E-value=0.0037 Score=51.82 Aligned_cols=37 Identities=24% Similarity=0.479 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
......+.....+|+.++|... |+|||+||+|++.+.
T Consensus 131 ~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~ 167 (418)
T KOG1167|consen 131 LAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNR 167 (418)
T ss_pred HHHHHHHHHHHHHHhhhhhccC---ccccCCCcccccccc
Confidence 4455666778889999999988 999999999999864
No 454
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=96.29 E-value=0.0049 Score=46.54 Aligned_cols=31 Identities=23% Similarity=0.531 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 184 NIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 184 ~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
.++.++++++.++|... ++|+|++|.||+++
T Consensus 94 ~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~ 124 (199)
T TIGR03724 94 ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR 124 (199)
T ss_pred HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE
Confidence 78889999999999877 99999999999986
No 455
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.27 E-value=0.00018 Score=56.79 Aligned_cols=82 Identities=20% Similarity=0.184 Sum_probs=37.6
Q ss_pred CCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCC--cc
Q 038318 6 TYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIP--KS 83 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p--~~ 83 (220)
.+.+.|+.=++.++ .|. -...|+.|+.|.||-|.++..-| +..++.|++|+|..|.+. .+. .-
T Consensus 19 ~~vkKLNcwg~~L~-DIs-ic~kMp~lEVLsLSvNkIssL~p------------l~rCtrLkElYLRkN~I~-sldEL~Y 83 (388)
T KOG2123|consen 19 ENVKKLNCWGCGLD-DIS-ICEKMPLLEVLSLSVNKISSLAP------------LQRCTRLKELYLRKNCIE-SLDELEY 83 (388)
T ss_pred HHhhhhcccCCCcc-HHH-HHHhcccceeEEeeccccccchh------------HHHHHHHHHHHHHhcccc-cHHHHHH
Confidence 34445555555554 221 22345555566666665552222 344445555555555543 111 11
Q ss_pred ccCCCCCCeeeccCCcccc
Q 038318 84 FKGLSRLKQLNAAHSKLEE 102 (220)
Q Consensus 84 ~~~l~~L~~l~l~~n~l~~ 102 (220)
+.++++|+.|+|..|.=.|
T Consensus 84 LknlpsLr~LWL~ENPCc~ 102 (388)
T KOG2123|consen 84 LKNLPSLRTLWLDENPCCG 102 (388)
T ss_pred HhcCchhhhHhhccCCccc
Confidence 2344555555555554443
No 456
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=96.26 E-value=0.004 Score=48.44 Aligned_cols=32 Identities=22% Similarity=0.395 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 185 IMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 185 i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...+++.++..+|... ++|||++|+|++++++
T Consensus 140 ~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~ 171 (232)
T PRK10359 140 VKAKIKASIESLHQHG---MVSGDPHKGNFIVSKN 171 (232)
T ss_pred HHHHHHHHHHHHHHcC---CccCCCChHHEEEeCC
Confidence 3457888899999888 9999999999999865
No 457
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=96.24 E-value=0.0067 Score=48.76 Aligned_cols=39 Identities=26% Similarity=0.550 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
...|+.+..++.+.++++|... ++|+|+|++|+++++++
T Consensus 144 ~~arl~lT~Q~I~lvA~Lh~~G---lVHgdi~~~nfll~~~G 182 (288)
T PF14531_consen 144 FAARLSLTVQMIRLVANLHSYG---LVHGDIKPENFLLDQDG 182 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEE-TTS
T ss_pred HHHHHHHHHHHHHHHHHHhhcc---eEecccceeeEEEcCCC
Confidence 4467888899999999999998 99999999999999875
No 458
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=96.23 E-value=0.0036 Score=50.16 Aligned_cols=39 Identities=26% Similarity=0.437 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
-..-..+..+..+||+|||.-. =+|||+|..||||+.++
T Consensus 128 E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G 166 (502)
T KOG0574|consen 128 EQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDG 166 (502)
T ss_pred HHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccc
Confidence 4455677888999999999876 89999999999998653
No 459
>PRK15386 type III secretion protein GogB; Provisional
Probab=96.17 E-value=0.0084 Score=50.48 Aligned_cols=41 Identities=24% Similarity=0.302 Sum_probs=26.4
Q ss_pred CCCceecCC-CccCCccChhhhccccCCeeeccCC-CCCCCCChhhh
Q 038318 7 YLRTPHLGS-NNLTSSISLSLWNVECILYIDLSSN-SLSGFLPSNIE 51 (220)
Q Consensus 7 ~L~~L~Ls~-n~l~g~~p~~~~~l~~L~~L~Ls~N-~l~g~~p~~~~ 51 (220)
+|++|.+++ ++++ .+|..+ .++|++|++++| .+. .+|..+.
T Consensus 73 sLtsL~Lsnc~nLt-sLP~~L--P~nLe~L~Ls~Cs~L~-sLP~sLe 115 (426)
T PRK15386 73 ELTEITIENCNNLT-TLPGSI--PEGLEKLTVCHCPEIS-GLPESVR 115 (426)
T ss_pred CCcEEEccCCCCcc-cCCchh--hhhhhheEccCccccc-ccccccc
Confidence 578888876 4444 666554 357788888877 444 5665543
No 460
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=96.12 E-value=0.00031 Score=55.99 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=24.8
Q ss_pred CCCCCCCceecCCCccCCccChhhhccccCCeeeccCC
Q 038318 3 GSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSN 40 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N 40 (220)
+.+.+|+.|.|.++++...+-..+..=.+|+.|++++.
T Consensus 207 s~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~ 244 (419)
T KOG2120|consen 207 SQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMC 244 (419)
T ss_pred HHHHhhhhccccccccCcHHHHHHhccccceeeccccc
Confidence 34556677777777777666666666666666666653
No 461
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.01 E-value=0.0035 Score=50.17 Aligned_cols=86 Identities=21% Similarity=0.130 Sum_probs=52.4
Q ss_pred ccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC
Q 038318 28 NVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE 107 (220)
Q Consensus 28 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~ 107 (220)
..+.++.+||.+|+++ ...+-.+ .+.+||.|+.|+++.|++...+-..-..+.+|+++-|.+..+.-..-.+
T Consensus 69 ~~~~v~elDL~~N~iS-dWseI~~-------ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s 140 (418)
T KOG2982|consen 69 SVTDVKELDLTGNLIS-DWSEIGA-------ILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTS 140 (418)
T ss_pred Hhhhhhhhhcccchhc-cHHHHHH-------HHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhh
Confidence 3677888999999887 3333221 3457889999999999997443221135567777777666554222111
Q ss_pred --cccccccccccccc
Q 038318 108 --RPLRNILAQSFIWN 121 (220)
Q Consensus 108 --~~~~~l~~l~~~~n 121 (220)
..++.++.+.++.|
T Consensus 141 ~l~~lP~vtelHmS~N 156 (418)
T KOG2982|consen 141 SLDDLPKVTELHMSDN 156 (418)
T ss_pred hhhcchhhhhhhhccc
Confidence 34444555555554
No 462
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=95.99 E-value=0.0073 Score=56.11 Aligned_cols=37 Identities=32% Similarity=0.565 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
|... ++..+..|++-+|.-+ .||||+||.|||||.++
T Consensus 176 ~ArF--Y~aEiVlAldslH~mg---yVHRDiKPDNvLld~~G 212 (1317)
T KOG0612|consen 176 WARF--YTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSG 212 (1317)
T ss_pred HHHH--HHHHHHHHHHHHHhcc---ceeccCCcceeEecccC
Confidence 5533 3566778899999877 99999999999999764
No 463
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=95.97 E-value=0.00021 Score=54.98 Aligned_cols=86 Identities=22% Similarity=0.242 Sum_probs=60.8
Q ss_pred CCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCc
Q 038318 3 GSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPK 82 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~ 82 (220)
......+.||++.|++- ..-..|+-++.|..||++.|++. ..|.++ +++..+..+++-.|+++ ..|.
T Consensus 39 ~~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~----------~q~~e~~~~~~~~n~~~-~~p~ 105 (326)
T KOG0473|consen 39 ASFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDA----------KQQRETVNAASHKNNHS-QQPK 105 (326)
T ss_pred hccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhH----------HHHHHHHHHHhhccchh-hCCc
Confidence 34456678888888876 56667777888888888888887 677655 44445666666667766 6677
Q ss_pred cccCCCCCCeeeccCCccc
Q 038318 83 SFKGLSRLKQLNAAHSKLE 101 (220)
Q Consensus 83 ~~~~l~~L~~l~l~~n~l~ 101 (220)
+++..+.++++++-.|.+.
T Consensus 106 s~~k~~~~k~~e~k~~~~~ 124 (326)
T KOG0473|consen 106 SQKKEPHPKKNEQKKTEFF 124 (326)
T ss_pred cccccCCcchhhhccCcch
Confidence 7777777777777666654
No 464
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.97 E-value=0.00082 Score=53.18 Aligned_cols=81 Identities=23% Similarity=0.332 Sum_probs=62.8
Q ss_pred CCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCc
Q 038318 3 GSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPK 82 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~ 82 (220)
.+++.|++|.||-|.++ .+- .+..++.|+.|+|..|.|. .+.+ +. -+.++++|+.|-|..|.-.|.-+.
T Consensus 38 ~kMp~lEVLsLSvNkIs-sL~-pl~rCtrLkElYLRkN~I~-sldE-L~-------YLknlpsLr~LWL~ENPCc~~ag~ 106 (388)
T KOG2123|consen 38 EKMPLLEVLSLSVNKIS-SLA-PLQRCTRLKELYLRKNCIE-SLDE-LE-------YLKNLPSLRTLWLDENPCCGEAGQ 106 (388)
T ss_pred HhcccceeEEeeccccc-cch-hHHHHHHHHHHHHHhcccc-cHHH-HH-------HHhcCchhhhHhhccCCcccccch
Confidence 46889999999999998 333 3789999999999999986 3332 22 466888999999999988777664
Q ss_pred c-----ccCCCCCCeee
Q 038318 83 S-----FKGLSRLKQLN 94 (220)
Q Consensus 83 ~-----~~~l~~L~~l~ 94 (220)
. +.-+++|+.||
T Consensus 107 nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 107 NYRRKVLRVLPNLKKLD 123 (388)
T ss_pred hHHHHHHHHcccchhcc
Confidence 3 44577777776
No 465
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=95.91 E-value=0.0096 Score=45.21 Aligned_cols=40 Identities=33% Similarity=0.469 Sum_probs=35.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.++.|+|... ++|+|++++|++++.+
T Consensus 95 ~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~ 134 (225)
T smart00221 95 LSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMD 134 (225)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCC
Confidence 347788899999999999999886 9999999999999864
No 466
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.91 E-value=0.0075 Score=50.42 Aligned_cols=37 Identities=24% Similarity=0.376 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 181 DMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 181 ~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
...-+|.+||.||=|||+.. |+.||+|..||+||.++
T Consensus 451 ~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eG 487 (683)
T KOG0696|consen 451 VAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEG 487 (683)
T ss_pred hhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCC
Confidence 45667899999999999988 99999999999999764
No 467
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=95.88 E-value=0.0056 Score=45.51 Aligned_cols=37 Identities=32% Similarity=0.543 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 181 DMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 181 ~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
....+..+..+|+.|.|+.. +.|||+||.|.+++.++
T Consensus 102 ~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ng 138 (292)
T KOG0662|consen 102 IVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNG 138 (292)
T ss_pred HHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCC
Confidence 44567788899999999988 99999999999998653
No 468
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.88 E-value=0.007 Score=51.98 Aligned_cols=36 Identities=31% Similarity=0.517 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 180 ~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
.-..+++.+|..|+.|.|+-+ ++|||+||+|+..-|
T Consensus 118 ~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFE 153 (864)
T KOG4717|consen 118 DLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFE 153 (864)
T ss_pred HHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEee
Confidence 345788999999999999998 999999999998644
No 469
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=95.84 E-value=0.0048 Score=27.19 Aligned_cols=13 Identities=38% Similarity=0.529 Sum_probs=5.2
Q ss_pred cCCeeeccCCCCC
Q 038318 31 CILYIDLSSNSLS 43 (220)
Q Consensus 31 ~L~~L~Ls~N~l~ 43 (220)
+|+.|++++|+++
T Consensus 2 ~L~~L~l~~n~L~ 14 (17)
T PF13504_consen 2 NLRTLDLSNNRLT 14 (17)
T ss_dssp T-SEEEETSS--S
T ss_pred ccCEEECCCCCCC
Confidence 4555555555544
No 470
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=95.83 E-value=0.016 Score=52.04 Aligned_cols=38 Identities=26% Similarity=0.505 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
|-+......|||.|+.||-.-. .+|||+-..|||++.+
T Consensus 730 viQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsn 767 (996)
T KOG0196|consen 730 VIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSN 767 (996)
T ss_pred eehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccc
Confidence 6677888999999999999777 9999999999999865
No 471
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=95.82 E-value=0.022 Score=46.42 Aligned_cols=40 Identities=30% Similarity=0.512 Sum_probs=35.2
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
+.+......+|.++...++|+|+.. .|.||+||.|.|+..
T Consensus 120 ~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGr 159 (449)
T KOG1165|consen 120 RFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGR 159 (449)
T ss_pred cccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecC
Confidence 3446678899999999999999998 999999999999864
No 472
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.81 E-value=0.0071 Score=50.59 Aligned_cols=32 Identities=38% Similarity=0.666 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 185 IMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 185 i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+..++..|+.|+|.+. .+|||+|+.||++.++
T Consensus 116 ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~ 147 (467)
T KOG0201|consen 116 ILREVLKGLDYLHSEK---KIHRDIKAANILLSES 147 (467)
T ss_pred ehHHHHHHhhhhhhcc---eecccccccceeEecc
Confidence 4567788999999998 9999999999999765
No 473
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=95.80 E-value=0.0077 Score=29.62 Aligned_cols=14 Identities=36% Similarity=0.494 Sum_probs=7.4
Q ss_pred CCCCceecCCCccC
Q 038318 6 TYLRTPHLGSNNLT 19 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~ 19 (220)
++|++|+|++|+++
T Consensus 2 ~~L~~L~L~~N~l~ 15 (26)
T smart00370 2 PNLRELDLSNNQLS 15 (26)
T ss_pred CCCCEEECCCCcCC
Confidence 44555555555555
No 474
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=95.80 E-value=0.0077 Score=29.62 Aligned_cols=14 Identities=36% Similarity=0.494 Sum_probs=7.4
Q ss_pred CCCCceecCCCccC
Q 038318 6 TYLRTPHLGSNNLT 19 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~ 19 (220)
++|++|+|++|+++
T Consensus 2 ~~L~~L~L~~N~l~ 15 (26)
T smart00369 2 PNLRELDLSNNQLS 15 (26)
T ss_pred CCCCEEECCCCcCC
Confidence 44555555555555
No 475
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.79 E-value=0.0091 Score=52.60 Aligned_cols=37 Identities=27% Similarity=0.490 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 180 SDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 180 ~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+-.-++.++..||.|||... |||||+|..|||+.-|
T Consensus 130 ~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~Tld 166 (1187)
T KOG0579|consen 130 DQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLD 166 (1187)
T ss_pred HHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEec
Confidence 355667888999999999988 9999999999998544
No 476
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=95.79 E-value=0.014 Score=48.05 Aligned_cols=36 Identities=28% Similarity=0.498 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
...-..++.|+.+++.|||... ++|-|+||+|||+.
T Consensus 191 i~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfv 226 (415)
T KOG0671|consen 191 IDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFV 226 (415)
T ss_pred hHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEe
Confidence 4456778899999999999887 99999999999984
No 477
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=95.73 E-value=0.012 Score=46.76 Aligned_cols=38 Identities=39% Similarity=0.725 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
......+..+++.++.|+|... ++|||+||+||+++..
T Consensus 100 ~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~ 137 (384)
T COG0515 100 ESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRD 137 (384)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCC
Confidence 4466788888889999999988 9999999999999864
No 478
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=95.71 E-value=0.012 Score=51.26 Aligned_cols=39 Identities=26% Similarity=0.400 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
-....-|..+++.|..++|... |+|||+|=+|+.+|.++
T Consensus 669 E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g 707 (772)
T KOG1152|consen 669 EPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNG 707 (772)
T ss_pred hHHHHHHHHHHHhccccccccC---ceecccccccEEEecCC
Confidence 4456778999999999999888 99999999999998764
No 479
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=95.71 E-value=0.027 Score=39.17 Aligned_cols=85 Identities=19% Similarity=0.246 Sum_probs=50.4
Q ss_pred CCCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccC
Q 038318 1 MLGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKI 80 (220)
Q Consensus 1 ~l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~ 80 (220)
+|.++++|+.+.+.. .++..-...|.++++|+.+.+..+ +. .++.. .|..+++++.+.+.+ .+....
T Consensus 7 ~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~-~i~~~---------~F~~~~~l~~i~~~~-~~~~i~ 73 (129)
T PF13306_consen 7 AFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LT-SIGDN---------AFSNCKSLESITFPN-NLKSIG 73 (129)
T ss_dssp TTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TS-CE-TT---------TTTT-TT-EEEEETS-TT-EE-
T ss_pred HHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-cc-cccee---------eeecccccccccccc-cccccc
Confidence 467888999999885 566344456888889999999876 55 55542 466777788888866 433234
Q ss_pred CccccCCCCCCeeeccCC
Q 038318 81 PKSFKGLSRLKQLNAAHS 98 (220)
Q Consensus 81 p~~~~~l~~L~~l~l~~n 98 (220)
...|..++.++.+++..+
T Consensus 74 ~~~F~~~~~l~~i~~~~~ 91 (129)
T PF13306_consen 74 DNAFSNCTNLKNIDIPSN 91 (129)
T ss_dssp TTTTTT-TTECEEEETTT
T ss_pred cccccccccccccccCcc
Confidence 456777888888888665
No 480
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.65 E-value=0.011 Score=52.63 Aligned_cols=32 Identities=31% Similarity=0.549 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 184 NIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 184 ~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
-+..+|.+||.|||... |+|||||..|+|++.
T Consensus 679 fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNT 710 (1226)
T KOG4279|consen 679 FYTKQILEGLKYLHENK---IVHRDIKGDNVLVNT 710 (1226)
T ss_pred HHHHHHHHHhhhhhhcc---eeeccccCCcEEEee
Confidence 45678999999999988 999999999999864
No 481
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=95.58 E-value=0.0045 Score=33.73 Aligned_cols=31 Identities=13% Similarity=0.321 Sum_probs=17.2
Q ss_pred CcchhhhhhhhHhHHHHHHHHHHHHhhhhcc
Q 038318 144 KKDTLLILKYIFPLIMSIALITILILFCIRC 174 (220)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 174 (220)
+....+..++++++++++.+++.+++++|||
T Consensus 8 ~~~vaIa~~VvVPV~vI~~vl~~~l~~~~rR 38 (40)
T PF08693_consen 8 SNTVAIAVGVVVPVGVIIIVLGAFLFFWYRR 38 (40)
T ss_pred CceEEEEEEEEechHHHHHHHHHHhheEEec
Confidence 3344455667777776666655544443433
No 482
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=95.40 E-value=0.015 Score=46.15 Aligned_cols=115 Identities=19% Similarity=0.150 Sum_probs=68.5
Q ss_pred CCCCCCCCceecCCCccCCccChhh----hccccCCeeeccCCCCCCCCCh-hhhc-CccC--hhhhcCCCCCCEEeccC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSL----WNVECILYIDLSSNSLSGFLPS-NIEK-LKVL--VDCFGSLTSLEFLDISN 73 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~----~~l~~L~~L~Ls~N~l~g~~p~-~~~~-l~~L--p~~~~~l~~L~~L~ls~ 73 (220)
+-++|+|+..+||+|.+....|+.+ +.-+.|.+|.+++|.+- ++.. -+++ +..| -.-..+-|.|+.++...
T Consensus 88 Llkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlG-p~aG~rigkal~~la~nKKaa~kp~Le~vicgr 166 (388)
T COG5238 88 LLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLG-PIAGGRIGKALFHLAYNKKAADKPKLEVVICGR 166 (388)
T ss_pred HhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCC-ccchhHHHHHHHHHHHHhhhccCCCceEEEecc
Confidence 4578999999999999998888754 55688999999999984 4432 2331 1111 11233446677777777
Q ss_pred CcccccCCcc-----ccCCCCCCeeeccCCcccccCCCC---------cccccccccccccc
Q 038318 74 NNLFGKIPKS-----FKGLSRLKQLNAAHSKLEEEIPIE---------RPLRNILAQSFIWN 121 (220)
Q Consensus 74 N~l~~~~p~~-----~~~l~~L~~l~l~~n~l~~~~p~~---------~~~~~l~~l~~~~n 121 (220)
|++.. .|.. +..-..|+.+.+..|.+. |.. ....+|..++++.|
T Consensus 167 NRlen-gs~~~~a~~l~sh~~lk~vki~qNgIr---pegv~~L~~~gl~y~~~LevLDlqDN 224 (388)
T COG5238 167 NRLEN-GSKELSAALLESHENLKEVKIQQNGIR---PEGVTMLAFLGLFYSHSLEVLDLQDN 224 (388)
T ss_pred chhcc-CcHHHHHHHHHhhcCceeEEeeecCcC---cchhHHHHHHHHHHhCcceeeecccc
Confidence 77652 2211 111134555666555443 221 23445556666666
No 483
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=95.35 E-value=0.013 Score=54.35 Aligned_cols=38 Identities=39% Similarity=0.664 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-...+.++.+||+|+.||+... .+||||-..|.||+++
T Consensus 801 ~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~ 838 (1025)
T KOG1095|consen 801 MRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDER 838 (1025)
T ss_pred HHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeeccc
Confidence 5567899999999999999988 9999999999999975
No 484
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=95.23 E-value=0.03 Score=40.90 Aligned_cols=35 Identities=29% Similarity=0.488 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHhhCC--CCceEeeCCCCCceeecC
Q 038318 184 NIMIDVALILEYVHHDH--STLMVHCDLKPDNILIDE 218 (220)
Q Consensus 184 ~i~~~ia~~l~~lh~~~--~~~i~h~dlk~~nill~~ 218 (220)
.++.++++++..+|... ...++|+|+++.||++++
T Consensus 87 ~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~~ 123 (170)
T cd05151 87 ENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLDD 123 (170)
T ss_pred HHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEEC
Confidence 34567888999999865 234799999999999874
No 485
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.21 E-value=0.02 Score=51.58 Aligned_cols=38 Identities=39% Similarity=0.605 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.+.||.+||.|++||.... .+|||+-..|.|+.++
T Consensus 602 ~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 602 TSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGEN 639 (774)
T ss_pred HHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccc
Confidence 3467899999999999999988 9999999999999875
No 486
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.19 E-value=0.024 Score=46.23 Aligned_cols=33 Identities=30% Similarity=0.550 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 185 IMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 185 i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
+...|..||.|||++. |+.||+|..|+|+|..+
T Consensus 356 ys~ei~lal~flh~rg---iiyrdlkldnvlldaeg 388 (593)
T KOG0695|consen 356 YSAEICLALNFLHERG---IIYRDLKLDNVLLDAEG 388 (593)
T ss_pred hhHHHHHHHHHHhhcC---eeeeeccccceEEccCC
Confidence 4557788999999988 99999999999998753
No 487
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=95.16 E-value=0.02 Score=28.06 Aligned_cols=19 Identities=42% Similarity=0.551 Sum_probs=11.4
Q ss_pred cccCCeeeccCCCCCCCCCh
Q 038318 29 VECILYIDLSSNSLSGFLPS 48 (220)
Q Consensus 29 l~~L~~L~Ls~N~l~g~~p~ 48 (220)
+++|++|+|++|+++ .+|.
T Consensus 1 L~~L~~L~L~~N~l~-~lp~ 19 (26)
T smart00370 1 LPNLRELDLSNNQLS-SLPP 19 (26)
T ss_pred CCCCCEEECCCCcCC-cCCH
Confidence 345666666666666 5554
No 488
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=95.16 E-value=0.02 Score=28.06 Aligned_cols=19 Identities=42% Similarity=0.551 Sum_probs=11.4
Q ss_pred cccCCeeeccCCCCCCCCCh
Q 038318 29 VECILYIDLSSNSLSGFLPS 48 (220)
Q Consensus 29 l~~L~~L~Ls~N~l~g~~p~ 48 (220)
+++|++|+|++|+++ .+|.
T Consensus 1 L~~L~~L~L~~N~l~-~lp~ 19 (26)
T smart00369 1 LPNLRELDLSNNQLS-SLPP 19 (26)
T ss_pred CCCCCEEECCCCcCC-cCCH
Confidence 345666666666666 5554
No 489
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=94.88 E-value=0.036 Score=42.37 Aligned_cols=36 Identities=28% Similarity=0.529 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 181 DMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 181 ~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+..++..++..+.-||... ++|+|++++|||++++
T Consensus 119 ~~~~ll~~l~~~i~~lH~~g---i~H~Dl~~~NILv~~~ 154 (206)
T PF06293_consen 119 QRRELLRALARLIAKLHDAG---IYHGDLNPSNILVDPD 154 (206)
T ss_pred hHHHHHHHHHHHHHHHHHCc---CCCCCCCcccEEEeCC
Confidence 46778888899999999988 9999999999999875
No 490
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=94.83 E-value=0.028 Score=50.28 Aligned_cols=38 Identities=34% Similarity=0.491 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-...+.++.|||.|++||++.. ++|||+-..|||+.++
T Consensus 417 ~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaRNVLi~~~ 454 (609)
T KOG0200|consen 417 TKDLLSFAYQIANGMEYLASVP---CVHRDLAARNVLITKN 454 (609)
T ss_pred HHHHHHHHHHHHHHHHHHhhCC---ccchhhhhhhEEecCC
Confidence 3467899999999999999876 9999999999999875
No 491
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=94.62 E-value=0.04 Score=46.11 Aligned_cols=33 Identities=30% Similarity=0.405 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceee
Q 038318 181 DMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216 (220)
Q Consensus 181 ~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill 216 (220)
.+.-+..+..+|+.|||... +.|||+|+.|||+
T Consensus 342 ~~~~~laQlLEav~hL~~hg---vAhRDlKSDNiL~ 374 (598)
T KOG4158|consen 342 TGRVILAQLLEAVTHLHKHG---VAHRDLKSDNILL 374 (598)
T ss_pred HHHHHHHHHHHHHHHHHHcc---chhhcccccceEE
Confidence 34556788999999999888 9999999999998
No 492
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=94.47 E-value=0.1 Score=43.62 Aligned_cols=35 Identities=23% Similarity=0.501 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 182 MLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 182 r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
....+.+++.|++|+|... ++|.|+-..|-++|+.
T Consensus 398 lV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 398 LVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQ 432 (563)
T ss_pred HHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhh
Confidence 3567889999999999888 9999999999999863
No 493
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=94.45 E-value=0.051 Score=41.31 Aligned_cols=34 Identities=26% Similarity=0.400 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHH-hhCCCCceEeeCCCCCceeecC
Q 038318 182 MLNIMIDVALILEYV-HHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 182 r~~i~~~ia~~l~~l-h~~~~~~i~h~dlk~~nill~~ 218 (220)
..++..++..++.++ |... ++|+|+++.||++++
T Consensus 126 ~~~i~~~i~~~l~~l~H~~g---lVHGDLs~~NIL~~~ 160 (197)
T cd05146 126 MKNAYYQVLSMMKQLYKECN---LVHADLSEYNMLWHD 160 (197)
T ss_pred HHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEC
Confidence 345667888888888 6666 999999999999964
No 494
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=94.28 E-value=0.074 Score=48.44 Aligned_cols=39 Identities=26% Similarity=0.416 Sum_probs=35.2
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+|..-.-|..++.+|+.+||... ++|||+|-.||||.++
T Consensus 121 ~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e 159 (953)
T KOG0587|consen 121 KEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTEN 159 (953)
T ss_pred hhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEecc
Confidence 38888888999999999999888 9999999999999765
No 495
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=93.99 E-value=0.068 Score=42.71 Aligned_cols=35 Identities=17% Similarity=0.103 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 181 DMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 181 ~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
.+..++..++..+.-||... ++|+|++++||+++.
T Consensus 139 ~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~ 173 (268)
T PRK15123 139 LKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHL 173 (268)
T ss_pred HHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEec
Confidence 45678888999999999988 999999999999974
No 496
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=93.98 E-value=0.082 Score=45.92 Aligned_cols=35 Identities=29% Similarity=0.432 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 181 DMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 181 ~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
.+..+..++..++.+.|.+. |||.|+||.|+|+-.
T Consensus 461 ~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlVk 495 (677)
T KOG0596|consen 461 FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLVK 495 (677)
T ss_pred HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEEe
Confidence 45667889999999999988 999999999999843
No 497
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=93.95 E-value=0.13 Score=38.87 Aligned_cols=43 Identities=21% Similarity=0.421 Sum_probs=37.8
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|..|.++|.++.+.++++++.....+..+|+++.|+-++++
T Consensus 56 ~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~ 98 (188)
T PF12260_consen 56 SPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDD 98 (188)
T ss_pred cCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCC
Confidence 3499999999999999999998766668889999999998865
No 498
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=93.79 E-value=0.067 Score=49.78 Aligned_cols=37 Identities=27% Similarity=0.401 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
|.-.+.+++++++.++.+|... |||+||||.|.+|..
T Consensus 793 e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~ 829 (974)
T KOG1166|consen 793 EYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRR 829 (974)
T ss_pred chhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeec
Confidence 7888899999999999999888 999999999999853
No 499
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=93.64 E-value=0.14 Score=35.42 Aligned_cols=83 Identities=25% Similarity=0.314 Sum_probs=49.6
Q ss_pred CCCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccC
Q 038318 1 MLGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKI 80 (220)
Q Consensus 1 ~l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~ 80 (220)
+|.++++|+.+.+.++ +...--..|.++++|+.+.+.+ .+. .++.. .|..+++|+.+++..+ ++..-
T Consensus 30 ~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~-~i~~~---------~F~~~~~l~~i~~~~~-~~~i~ 96 (129)
T PF13306_consen 30 AFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLK-SIGDN---------AFSNCTNLKNIDIPSN-ITEIG 96 (129)
T ss_dssp TTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT--EE-TT---------TTTT-TTECEEEETTT--BEEH
T ss_pred hccccccccccccccc-ccccceeeeecccccccccccc-ccc-ccccc---------cccccccccccccCcc-ccEEc
Confidence 3677889999999886 6633345678888899999976 333 34432 4667889999999776 54344
Q ss_pred CccccCCCCCCeeeccC
Q 038318 81 PKSFKGLSRLKQLNAAH 97 (220)
Q Consensus 81 p~~~~~l~~L~~l~l~~ 97 (220)
...|.++ .++.+.+..
T Consensus 97 ~~~f~~~-~l~~i~~~~ 112 (129)
T PF13306_consen 97 SSSFSNC-NLKEINIPS 112 (129)
T ss_dssp TTTTTT--T--EEE-TT
T ss_pred hhhhcCC-CceEEEECC
Confidence 5567776 788887664
No 500
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=93.43 E-value=0.015 Score=27.96 Aligned_cols=16 Identities=31% Similarity=0.407 Sum_probs=8.3
Q ss_pred CCCCceecCCCccCCc
Q 038318 6 TYLRTPHLGSNNLTSS 21 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~g~ 21 (220)
++|++|+|++|+++..
T Consensus 2 ~~L~~L~l~~n~i~~~ 17 (24)
T PF13516_consen 2 PNLETLDLSNNQITDE 17 (24)
T ss_dssp TT-SEEE-TSSBEHHH
T ss_pred CCCCEEEccCCcCCHH
Confidence 4566666666666543
Done!