Query 038318
Match_columns 220
No_of_seqs 348 out of 2973
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 16:45:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038318.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038318hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 99.9 1.2E-21 4.2E-26 175.6 12.2 126 2-140 628-753 (768)
2 1ogq_A PGIP-2, polygalacturona 99.8 3E-20 1E-24 150.0 10.0 127 2-128 121-308 (313)
3 3rgz_A Protein brassinosteroid 99.8 2.1E-19 7.2E-24 161.1 8.3 72 57-129 649-721 (768)
4 3m19_A Variable lymphocyte rec 99.8 2.4E-18 8.3E-23 134.5 12.4 124 2-125 55-193 (251)
5 2v70_A SLIT-2, SLIT homolog 2 99.8 1.6E-18 5.4E-23 133.2 10.3 119 8-126 34-168 (220)
6 2v9t_B SLIT homolog 2 protein 99.8 2.2E-18 7.7E-23 132.3 11.0 120 7-126 33-167 (220)
7 3rfs_A Internalin B, repeat mo 99.8 9.5E-18 3.2E-22 132.7 12.3 124 2-125 81-219 (272)
8 1ogq_A PGIP-2, polygalacturona 99.7 1.3E-18 4.3E-23 140.5 6.4 118 3-121 73-207 (313)
9 4fcg_A Uncharacterized protein 99.7 6.1E-18 2.1E-22 137.4 9.7 118 2-121 123-263 (328)
10 3e6j_A Variable lymphocyte rec 99.7 1.8E-17 6.3E-22 127.9 11.8 120 6-126 40-174 (229)
11 2wfh_A SLIT homolog 2 protein 99.7 2.4E-17 8.4E-22 124.0 11.2 110 6-126 31-141 (193)
12 1w8a_A SLIT protein; signaling 99.7 2.3E-17 7.9E-22 124.0 10.8 110 7-126 30-141 (192)
13 2o6q_A Variable lymphocyte rec 99.7 4.1E-17 1.4E-21 128.9 12.6 123 2-125 57-194 (270)
14 4fcg_A Uncharacterized protein 99.7 1.8E-17 6.2E-22 134.6 9.6 117 2-121 100-239 (328)
15 1ozn_A Reticulon 4 receptor; N 99.7 2.2E-17 7.4E-22 131.3 9.7 120 2-121 76-211 (285)
16 1p9a_G Platelet glycoprotein I 99.7 1E-16 3.6E-21 128.0 12.0 121 4-126 75-210 (290)
17 3m19_A Variable lymphocyte rec 99.7 1.9E-16 6.6E-21 123.7 13.2 122 6-128 35-171 (251)
18 2o6s_A Variable lymphocyte rec 99.7 1.9E-16 6.4E-21 120.3 12.6 122 5-126 27-163 (208)
19 2o6q_A Variable lymphocyte rec 99.7 4.1E-16 1.4E-20 123.1 13.9 119 7-126 38-171 (270)
20 1w8a_A SLIT protein; signaling 99.7 2.9E-17 1E-21 123.4 6.8 117 2-128 50-166 (192)
21 3rfs_A Internalin B, repeat mo 99.7 3.4E-16 1.2E-20 123.8 13.3 125 2-129 59-198 (272)
22 1ozn_A Reticulon 4 receptor; N 99.7 2.5E-16 8.6E-21 125.1 12.3 124 2-126 52-191 (285)
23 2z66_A Variable lymphocyte rec 99.7 7.9E-17 2.7E-21 129.2 8.9 125 2-127 97-238 (306)
24 3v47_A TOLL-like receptor 5B a 99.7 1.9E-16 6.4E-21 133.5 11.4 122 6-127 275-411 (455)
25 2o6r_A Variable lymphocyte rec 99.7 5.6E-16 1.9E-20 114.7 11.8 112 5-126 27-139 (177)
26 2o6s_A Variable lymphocyte rec 99.7 4.3E-16 1.5E-20 118.2 11.2 122 2-130 48-183 (208)
27 3zyi_A Leucine-rich repeat-con 99.7 3.7E-16 1.3E-20 132.0 11.2 70 57-126 235-305 (452)
28 3zyj_A Leucine-rich repeat-con 99.7 3.3E-16 1.1E-20 131.9 10.3 69 58-126 225-294 (440)
29 2v9t_B SLIT homolog 2 protein 99.7 7.8E-16 2.7E-20 118.1 11.3 116 9-128 14-144 (220)
30 3g39_A Variable lymphocyte rec 99.7 7E-16 2.4E-20 113.7 10.3 106 8-126 11-117 (170)
31 3vq2_A TLR4, TOLL-like recepto 99.6 2E-16 6.8E-21 138.0 8.3 124 2-126 420-560 (606)
32 2xot_A Amphoterin-induced prot 99.6 2E-16 6.8E-21 130.0 7.7 88 4-101 62-149 (361)
33 4eco_A Uncharacterized protein 99.6 1.9E-16 6.5E-21 139.2 7.0 116 4-121 247-387 (636)
34 2z66_A Variable lymphocyte rec 99.6 6.7E-16 2.3E-20 123.8 9.4 117 4-121 76-209 (306)
35 4g8a_A TOLL-like receptor 4; l 99.6 8.1E-16 2.8E-20 134.1 10.6 118 7-125 53-186 (635)
36 3t6q_A CD180 antigen; protein- 99.6 5.2E-16 1.8E-20 135.3 9.3 123 2-125 421-561 (606)
37 2v70_A SLIT-2, SLIT homolog 2 99.6 1.8E-15 6.1E-20 116.1 11.0 118 8-129 13-146 (220)
38 2r9u_A Variable lymphocyte rec 99.6 1.7E-15 5.9E-20 112.0 10.4 105 9-126 15-120 (174)
39 2z62_A TOLL-like receptor 4, v 99.6 7.1E-16 2.4E-20 122.0 8.5 104 2-105 48-166 (276)
40 4g8a_A TOLL-like receptor 4; l 99.6 7.8E-16 2.7E-20 134.2 9.5 114 3-126 466-582 (635)
41 1p9a_G Platelet glycoprotein I 99.6 1.8E-15 6.2E-20 120.8 10.9 117 2-121 51-182 (290)
42 4eco_A Uncharacterized protein 99.6 2.3E-16 7.8E-21 138.7 6.1 128 1-133 268-423 (636)
43 2z62_A TOLL-like receptor 4, v 99.6 2E-15 6.9E-20 119.3 10.2 120 2-121 72-210 (276)
44 2z63_A TOLL-like receptor 4, v 99.6 1E-15 3.5E-20 132.3 9.2 123 3-125 393-532 (570)
45 3vq2_A TLR4, TOLL-like recepto 99.6 9.9E-16 3.4E-20 133.6 8.2 120 2-121 395-531 (606)
46 2ell_A Acidic leucine-rich nuc 99.6 2.1E-15 7.1E-20 110.7 8.2 106 4-121 22-130 (168)
47 2je0_A Acidic leucine-rich nuc 99.6 1.1E-15 3.8E-20 109.9 6.5 110 4-126 15-127 (149)
48 3v47_A TOLL-like receptor 5B a 99.6 2.5E-15 8.5E-20 126.6 9.3 124 4-128 210-387 (455)
49 2id5_A Lingo-1, leucine rich r 99.6 2.3E-15 8E-20 127.7 9.2 100 2-101 52-165 (477)
50 2je0_A Acidic leucine-rich nuc 99.6 1.4E-15 4.7E-20 109.4 6.4 106 2-119 38-148 (149)
51 1ziw_A TOLL-like receptor 3; i 99.6 2.5E-15 8.4E-20 132.8 9.2 126 2-127 476-625 (680)
52 4ezg_A Putative uncharacterize 99.6 2.6E-15 8.9E-20 113.1 8.1 116 2-121 62-191 (197)
53 3e6j_A Variable lymphocyte rec 99.6 7.7E-15 2.6E-19 113.1 10.4 104 2-105 60-176 (229)
54 4ecn_A Leucine-rich repeat pro 99.6 2.2E-15 7.6E-20 136.2 8.3 115 4-121 489-629 (876)
55 3oja_A Leucine-rich immune mol 99.6 1.8E-15 6.3E-20 129.0 7.1 122 4-127 118-253 (487)
56 4ecn_A Leucine-rich repeat pro 99.6 1.3E-15 4.6E-20 137.6 6.4 123 2-129 511-661 (876)
57 3zyj_A Leucine-rich repeat-con 99.6 1.3E-14 4.3E-19 122.2 11.9 55 2-56 84-138 (440)
58 3t6q_A CD180 antigen; protein- 99.6 5.8E-15 2E-19 128.7 10.0 125 2-127 372-515 (606)
59 2xot_A Amphoterin-induced prot 99.6 5.9E-15 2E-19 121.2 9.5 110 6-126 39-150 (361)
60 4b8c_D Glucose-repressible alc 99.6 6.8E-15 2.3E-19 131.1 10.4 102 2-106 220-334 (727)
61 2z80_A TOLL-like receptor 2, v 99.6 2.1E-15 7.3E-20 123.3 6.6 109 3-121 73-184 (353)
62 2z7x_B TOLL-like receptor 1, v 99.6 7.9E-15 2.7E-19 125.7 10.2 116 3-121 321-454 (520)
63 3j0a_A TOLL-like receptor 5; m 99.6 6.8E-15 2.3E-19 133.2 10.2 124 2-126 44-188 (844)
64 2z81_A CD282 antigen, TOLL-lik 99.6 5.9E-15 2E-19 127.1 9.3 120 6-126 26-162 (549)
65 3zyi_A Leucine-rich repeat-con 99.6 1.1E-14 3.8E-19 122.9 10.8 54 2-55 95-148 (452)
66 2z63_A TOLL-like receptor 4, v 99.6 6E-15 2E-19 127.5 9.2 110 2-121 48-159 (570)
67 1ziw_A TOLL-like receptor 3; i 99.6 1.5E-14 5E-19 127.8 11.7 116 6-121 25-155 (680)
68 1wwl_A Monocyte differentiatio 99.6 4.3E-15 1.5E-19 119.7 7.5 97 4-101 93-214 (312)
69 2id5_A Lingo-1, leucine rich r 99.6 6.5E-15 2.2E-19 125.0 8.9 121 1-121 75-210 (477)
70 2z81_A CD282 antigen, TOLL-lik 99.6 3E-15 1E-19 129.0 6.6 107 1-107 45-167 (549)
71 3g39_A Variable lymphocyte rec 99.6 1.5E-14 5.2E-19 106.5 9.5 91 5-105 29-119 (170)
72 3oja_B Anopheles plasmodium-re 99.6 7.6E-15 2.6E-19 128.1 8.9 101 3-103 72-186 (597)
73 1wwl_A Monocyte differentiatio 99.6 1.5E-15 5.1E-20 122.3 4.0 121 3-125 118-266 (312)
74 1dce_A Protein (RAB geranylger 99.6 2.1E-14 7.2E-19 124.5 11.3 107 7-129 442-550 (567)
75 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 1.5E-14 5.1E-19 125.3 10.2 116 3-121 350-483 (562)
76 2wfh_A SLIT homolog 2 protein 99.5 1.7E-14 6E-19 108.3 8.9 91 2-102 50-140 (193)
77 2r9u_A Variable lymphocyte rec 99.5 2.8E-14 9.5E-19 105.5 9.5 88 6-103 33-120 (174)
78 2o6r_A Variable lymphocyte rec 99.5 2.8E-14 9.4E-19 105.5 9.3 94 2-105 48-141 (177)
79 4glp_A Monocyte differentiatio 99.5 2E-14 6.9E-19 115.6 9.2 121 3-126 142-286 (310)
80 3o6n_A APL1; leucine-rich repe 99.5 1.7E-14 5.7E-19 119.5 9.0 100 3-102 66-179 (390)
81 4ezg_A Putative uncharacterize 99.5 9.5E-15 3.3E-19 110.0 6.5 113 4-121 42-169 (197)
82 3j0a_A TOLL-like receptor 5; m 99.5 2E-14 6.9E-19 130.1 9.6 126 1-127 68-219 (844)
83 2z80_A TOLL-like receptor 2, v 99.5 3.2E-14 1.1E-18 116.3 9.7 109 6-125 52-163 (353)
84 2xwt_C Thyrotropin receptor; s 99.5 1.5E-14 5.2E-19 111.9 7.0 118 2-121 51-189 (239)
85 2ifg_A High affinity nerve gro 99.5 3.3E-14 1.1E-18 115.9 9.3 104 10-125 12-117 (347)
86 1xku_A Decorin; proteoglycan, 99.5 7.9E-14 2.7E-18 112.9 11.4 122 2-126 141-277 (330)
87 1xeu_A Internalin C; cellular 99.5 4.4E-14 1.5E-18 111.2 9.4 116 2-123 59-184 (263)
88 2z7x_B TOLL-like receptor 1, v 99.5 5E-14 1.7E-18 120.7 10.4 123 2-126 344-483 (520)
89 3o53_A Protein LRIM1, AGAP0063 99.5 1.6E-14 5.4E-19 116.6 6.8 106 5-121 119-224 (317)
90 2ft3_A Biglycan; proteoglycan, 99.5 9.9E-14 3.4E-18 112.5 11.4 116 2-121 74-203 (332)
91 4b8c_D Glucose-repressible alc 99.5 7.6E-15 2.6E-19 130.8 5.2 112 3-121 244-369 (727)
92 1xku_A Decorin; proteoglycan, 99.5 1.2E-13 4E-18 111.9 11.4 117 2-121 72-202 (330)
93 1h6t_A Internalin B; cell adhe 99.5 8.3E-14 2.8E-18 111.1 9.9 39 3-43 65-103 (291)
94 3oja_A Leucine-rich immune mol 99.5 1.1E-14 3.8E-19 124.2 5.1 43 59-101 139-182 (487)
95 3oja_B Anopheles plasmodium-re 99.5 6.1E-14 2.1E-18 122.4 9.6 122 4-126 49-185 (597)
96 2ell_A Acidic leucine-rich nuc 99.5 5E-14 1.7E-18 103.2 7.4 109 2-122 45-158 (168)
97 1m9s_A Internalin B; cell inva 99.5 1.3E-13 4.5E-18 120.4 10.5 60 59-121 148-207 (605)
98 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 1.2E-13 4.2E-18 119.5 10.2 122 2-125 373-511 (562)
99 2ft3_A Biglycan; proteoglycan, 99.5 1.5E-13 5E-18 111.4 10.1 68 57-126 210-278 (332)
100 3o6n_A APL1; leucine-rich repe 99.5 9.1E-14 3.1E-18 115.0 9.0 117 4-121 43-175 (390)
101 1h6t_A Internalin B; cell adhe 99.5 1.6E-13 5.4E-18 109.5 10.0 114 2-122 86-211 (291)
102 1a9n_A U2A', U2A'; complex (nu 99.5 6.2E-14 2.1E-18 103.6 6.8 106 2-122 15-124 (176)
103 1h6u_A Internalin H; cell adhe 99.5 1.6E-13 5.4E-18 110.3 9.5 59 60-121 169-227 (308)
104 1h6u_A Internalin H; cell adhe 99.5 2.1E-13 7.2E-18 109.6 10.2 39 3-43 60-98 (308)
105 4glp_A Monocyte differentiatio 99.5 1.4E-13 4.7E-18 110.7 8.6 81 28-122 222-305 (310)
106 2ifg_A High affinity nerve gro 99.5 1.5E-13 5.1E-18 112.0 9.0 90 2-102 27-117 (347)
107 4fmz_A Internalin; leucine ric 99.5 1.4E-13 4.8E-18 112.0 8.7 117 4-127 197-326 (347)
108 1a9n_A U2A', U2A'; complex (nu 99.5 5.6E-14 1.9E-18 103.8 5.5 102 6-121 42-150 (176)
109 2xwt_C Thyrotropin receptor; s 99.5 8.1E-14 2.8E-18 107.8 6.6 114 6-121 31-166 (239)
110 1m9s_A Internalin B; cell inva 99.4 2.3E-13 8E-18 118.8 9.7 113 2-121 61-185 (605)
111 1dce_A Protein (RAB geranylger 99.4 9E-15 3.1E-19 126.9 -0.8 121 3-128 346-524 (567)
112 1xeu_A Internalin C; cellular 99.4 3.1E-13 1.1E-17 106.3 7.9 115 2-126 37-164 (263)
113 3o53_A Protein LRIM1, AGAP0063 99.4 5.8E-14 2E-18 113.2 3.3 41 5-45 33-73 (317)
114 4fmz_A Internalin; leucine ric 99.4 1.8E-12 6.1E-17 105.5 9.2 115 2-125 173-300 (347)
115 1o6v_A Internalin A; bacterial 99.4 1.5E-12 5.1E-17 110.3 9.0 57 62-121 329-385 (466)
116 2ast_B S-phase kinase-associat 99.4 1.8E-13 6E-18 110.9 2.4 118 4-121 91-232 (336)
117 1o6v_A Internalin A; bacterial 99.3 3.2E-12 1.1E-16 108.2 10.1 119 2-128 239-369 (466)
118 2ast_B S-phase kinase-associat 99.3 1.2E-13 4E-18 111.9 0.3 121 2-122 114-258 (336)
119 1ds9_A Outer arm dynein; leuci 99.3 1.6E-14 5.4E-19 108.9 -4.8 103 4-121 46-150 (198)
120 1ds9_A Outer arm dynein; leuci 99.3 1.4E-14 4.9E-19 109.1 -6.7 107 4-125 16-128 (198)
121 1jl5_A Outer protein YOPM; leu 99.3 1.1E-11 3.6E-16 104.9 9.9 69 6-78 131-209 (454)
122 3bz5_A Internalin-J, INLJ; leu 99.3 3.2E-11 1.1E-15 102.1 12.1 40 2-44 102-141 (457)
123 2ca6_A RAN GTPase-activating p 99.3 5.7E-13 1.9E-17 110.1 1.1 120 2-121 56-226 (386)
124 3bz5_A Internalin-J, INLJ; leu 99.3 1.8E-11 6.3E-16 103.5 9.5 94 3-104 145-249 (457)
125 2ca6_A RAN GTPase-activating p 99.3 2.4E-12 8.2E-17 106.4 3.9 119 3-121 91-254 (386)
126 3cvr_A Invasion plasmid antige 99.2 1.2E-11 4E-16 107.2 7.4 53 64-121 180-240 (571)
127 4ay9_X Follicle-stimulating ho 99.2 1E-11 3.6E-16 101.4 6.1 115 6-121 30-187 (350)
128 4ay9_X Follicle-stimulating ho 99.2 1.7E-11 5.7E-16 100.1 6.3 123 1-126 49-216 (350)
129 3cvr_A Invasion plasmid antige 99.2 6.1E-11 2.1E-15 102.8 9.5 103 6-125 80-193 (571)
130 3goz_A Leucine-rich repeat-con 99.2 8.5E-12 2.9E-16 102.3 2.6 38 7-44 52-94 (362)
131 1jl5_A Outer protein YOPM; leu 99.2 1.1E-10 3.8E-15 98.6 9.4 33 7-43 92-124 (454)
132 3goz_A Leucine-rich repeat-con 99.1 1.9E-11 6.4E-16 100.3 3.2 118 4-121 20-177 (362)
133 1z7x_W Ribonuclease inhibitor; 99.1 4.6E-12 1.6E-16 106.7 -0.7 111 5-121 255-380 (461)
134 3g06_A SSPH2 (leucine-rich rep 99.1 2E-10 6.9E-15 100.5 9.6 56 62-122 239-295 (622)
135 3g06_A SSPH2 (leucine-rich rep 99.0 9.2E-10 3.2E-14 96.4 9.2 84 30-125 181-274 (622)
136 1z7x_W Ribonuclease inhibitor; 98.9 1.1E-10 3.9E-15 98.2 0.4 113 3-121 281-408 (461)
137 3rw6_A Nuclear RNA export fact 98.9 1.6E-09 5.5E-14 85.0 6.0 94 11-117 148-257 (267)
138 3rw6_A Nuclear RNA export fact 98.8 6.9E-10 2.4E-14 87.1 2.1 81 4-94 168-257 (267)
139 3hmm_A TGF-beta receptor type- 98.8 6.2E-09 2.1E-13 83.4 4.9 46 175-220 95-145 (303)
140 3omv_A RAF proto-oncogene seri 98.7 8.6E-09 2.9E-13 82.6 4.7 42 175-219 127-168 (307)
141 3un9_A NLR family member X1; l 98.7 6.8E-10 2.3E-14 91.5 -1.9 117 5-121 100-249 (372)
142 1io0_A Tropomodulin; LRR prote 98.7 2.8E-09 9.6E-14 79.2 0.7 114 2-121 32-161 (185)
143 3ogk_B Coronatine-insensitive 98.7 2.9E-09 9.8E-14 92.3 0.9 121 4-125 376-526 (592)
144 3sb4_A Hypothetical leucine ri 98.7 4E-08 1.4E-12 79.3 7.4 101 5-117 225-327 (329)
145 4asz_A BDNF/NT-3 growth factor 98.6 1.2E-08 4E-13 81.6 3.0 40 177-219 125-164 (299)
146 4aoj_A High affinity nerve gro 98.6 1.6E-08 5.6E-13 81.8 3.8 40 178-220 156-195 (329)
147 4gt4_A Tyrosine-protein kinase 98.6 1.4E-08 4.9E-13 81.4 3.0 39 178-219 143-181 (308)
148 3un9_A NLR family member X1; l 98.6 9.4E-09 3.2E-13 84.6 1.2 92 5-102 154-253 (372)
149 3sb4_A Hypothetical leucine ri 98.6 1.1E-07 3.6E-12 76.8 7.0 114 5-121 100-284 (329)
150 3ogk_B Coronatine-insensitive 98.5 6.4E-08 2.2E-12 83.8 5.3 85 4-95 162-250 (592)
151 3fpq_A Serine/threonine-protei 98.5 6.4E-08 2.2E-12 76.9 4.8 42 176-218 125-166 (290)
152 4g3f_A NF-kappa-beta-inducing 98.5 8.8E-08 3E-12 77.6 5.5 42 175-219 145-186 (336)
153 4ase_A Vascular endothelial gr 98.5 4.2E-08 1.4E-12 80.2 3.0 39 178-219 183-221 (353)
154 4g31_A Eukaryotic translation 98.5 8.8E-08 3E-12 76.5 4.1 40 178-220 116-155 (299)
155 4fih_A Serine/threonine-protei 98.5 1.4E-07 4.7E-12 76.7 4.9 41 177-220 167-207 (346)
156 4b9d_A Serine/threonine-protei 98.4 2.1E-07 7.3E-12 75.7 5.7 40 178-220 123-162 (350)
157 3hyh_A Carbon catabolite-derep 98.4 2.3E-07 7.9E-12 73.1 5.6 43 175-220 107-149 (275)
158 2p1m_B Transport inhibitor res 98.4 1.5E-08 5.3E-13 87.7 -1.3 116 5-121 371-516 (594)
159 4aw0_A HPDK1, 3-phosphoinositi 98.4 2.5E-07 8.4E-12 74.2 5.4 41 177-220 129-169 (311)
160 4fie_A Serine/threonine-protei 98.4 3E-07 1E-11 76.7 5.5 39 179-220 246-284 (423)
161 3ubd_A Ribosomal protein S6 ki 98.4 2.2E-07 7.4E-12 74.3 4.3 41 177-220 123-163 (304)
162 1io0_A Tropomodulin; LRR prote 98.4 6E-08 2E-12 72.0 0.8 94 2-101 61-164 (185)
163 2p1m_B Transport inhibitor res 98.3 9E-08 3.1E-12 82.9 0.4 63 59-121 151-221 (594)
164 4b99_A Mitogen-activated prote 98.3 6.1E-07 2.1E-11 74.4 5.2 44 174-220 152-195 (398)
165 4fdw_A Leucine rich hypothetic 98.3 3.4E-06 1.2E-10 70.0 9.6 94 1-96 175-308 (401)
166 4f9c_A Cell division cycle 7-r 98.2 7.3E-07 2.5E-11 73.0 4.5 38 179-219 116-153 (361)
167 4azs_A Methyltransferase WBDD; 98.2 7.4E-07 2.5E-11 77.3 4.0 35 183-220 342-376 (569)
168 3dzo_A Rhoptry kinase domain; 98.2 1.1E-06 3.7E-11 73.2 4.9 39 179-220 210-248 (413)
169 3v5w_A G-protein coupled recep 98.2 1.6E-06 5.4E-11 76.2 5.5 39 179-220 291-329 (689)
170 3byv_A Rhoptry kinase; malaria 98.2 1.4E-06 4.8E-11 71.5 4.9 38 179-219 205-242 (377)
171 3e7e_A HBUB1, BUB1A, mitotic c 98.1 1.8E-06 6E-11 70.5 4.6 39 177-218 169-207 (365)
172 3uim_A Brassinosteroid insensi 98.1 2.4E-06 8.3E-11 68.4 5.2 43 177-219 128-170 (326)
173 3p1a_A MYT1 kinase, membrane-a 98.1 1.6E-06 5.5E-11 69.2 3.9 40 177-219 154-193 (311)
174 3s95_A LIMK-1, LIM domain kina 98.1 4.1E-06 1.4E-10 66.6 5.4 41 176-219 104-144 (310)
175 2psq_A Fibroblast growth facto 98.1 3.2E-06 1.1E-10 69.2 4.9 40 178-220 201-240 (370)
176 3op5_A Serine/threonine-protei 98.0 3.5E-06 1.2E-10 68.7 4.7 39 176-217 148-186 (364)
177 3q60_A ROP5B; pseudokinase, tr 98.0 3.9E-06 1.3E-10 68.6 4.9 35 183-220 197-231 (371)
178 3q4u_A Activin receptor type-1 98.0 3.2E-06 1.1E-10 66.7 4.3 45 175-219 100-149 (301)
179 3poz_A Epidermal growth factor 98.0 2.9E-06 1E-10 68.2 4.0 41 176-219 113-153 (327)
180 3txo_A PKC-L, NPKC-ETA, protei 98.0 3.9E-06 1.3E-10 68.4 4.8 40 177-219 121-160 (353)
181 3qd2_B Eukaryotic translation 98.0 4.5E-06 1.5E-10 66.7 4.9 39 178-219 162-200 (332)
182 2vuw_A Serine/threonine-protei 98.0 2.1E-06 7.3E-11 69.1 3.0 39 178-219 159-198 (336)
183 2qkw_B Protein kinase; three-h 98.0 5.7E-06 1.9E-10 66.2 5.5 40 177-219 136-175 (321)
184 2izr_A Casein kinase I isoform 98.0 3.7E-06 1.3E-10 67.6 4.3 42 175-219 100-141 (330)
185 3g2f_A Bone morphogenetic prot 98.0 4.6E-06 1.6E-10 67.0 4.7 43 177-219 108-156 (336)
186 3kex_A Receptor tyrosine-prote 98.0 4.3E-06 1.5E-10 67.1 4.5 41 176-219 111-151 (325)
187 4dc2_A Protein kinase C IOTA t 98.0 4.8E-06 1.6E-10 69.0 4.8 42 176-220 149-190 (396)
188 1csn_A Casein kinase-1; phosph 98.0 5.4E-06 1.8E-10 65.3 4.9 40 177-219 103-142 (298)
189 3pfq_A PKC-B, PKC-beta, protei 98.0 7.1E-06 2.4E-10 72.5 6.1 39 179-220 441-479 (674)
190 2ra8_A Uncharacterized protein 98.0 1.7E-06 5.8E-11 70.9 1.8 107 4-121 170-289 (362)
191 3rp9_A Mitogen-activated prote 98.0 5.8E-06 2E-10 69.5 5.2 40 177-219 153-192 (458)
192 3g33_A Cell division protein k 98.0 5.5E-06 1.9E-10 65.8 4.6 40 177-219 117-156 (308)
193 2i0e_A Protein kinase C-beta I 98.0 6.1E-06 2.1E-10 67.3 4.8 41 176-219 117-157 (353)
194 1xjd_A Protein kinase C, theta 98.0 6.2E-06 2.1E-10 67.0 4.8 41 176-219 114-154 (345)
195 1wak_A Serine/threonine-protei 98.0 8.4E-06 2.9E-10 66.8 5.7 40 177-219 143-183 (397)
196 2zv2_A Calcium/calmodulin-depe 98.0 6.8E-06 2.3E-10 64.9 4.9 39 178-219 135-173 (298)
197 2vd5_A DMPK protein; serine/th 98.0 6.2E-06 2.1E-10 68.7 4.8 41 177-220 159-199 (412)
198 3lb7_A RAF proto-oncogene seri 98.0 8.1E-06 2.8E-10 65.0 5.3 42 175-219 127-168 (307)
199 1rjb_A FL cytokine receptor; k 98.0 6.6E-06 2.3E-10 66.3 4.8 39 178-219 170-208 (344)
200 1o6l_A RAC-beta serine/threoni 98.0 6.7E-06 2.3E-10 66.6 4.8 40 177-219 102-141 (337)
201 3kul_A Ephrin type-A receptor 98.0 6.9E-06 2.4E-10 66.0 4.8 41 176-219 147-187 (325)
202 3soc_A Activin receptor type-2 98.0 5.3E-06 1.8E-10 66.5 4.1 44 176-219 117-167 (322)
203 1x8b_A WEE1HU, WEE1-like prote 98.0 6.3E-06 2.2E-10 64.4 4.4 39 177-218 112-150 (289)
204 3l9p_A Anaplastic lymphoma kin 98.0 5.1E-06 1.7E-10 68.0 4.0 38 178-218 179-216 (367)
205 3o0g_A Cell division protein k 98.0 7.4E-06 2.5E-10 64.5 4.8 41 176-219 97-137 (292)
206 3a8x_A Protein kinase C IOTA t 98.0 7.1E-06 2.4E-10 66.6 4.8 41 176-219 106-146 (345)
207 3gni_B Strad alpha; kinase fol 98.0 7.1E-06 2.4E-10 67.5 4.9 40 177-219 125-164 (389)
208 3oz6_A Mitogen-activated prote 98.0 7.2E-06 2.5E-10 67.4 4.9 40 177-219 106-145 (388)
209 3mdy_A Bone morphogenetic prot 98.0 7.2E-06 2.4E-10 65.8 4.8 44 176-219 130-178 (337)
210 1j1b_A Glycogen synthase kinas 97.9 6.4E-06 2.2E-10 68.6 4.6 42 175-219 151-192 (420)
211 1fot_A TPK1 delta, CAMP-depend 97.9 1.1E-05 3.7E-10 64.8 5.8 40 177-219 103-142 (318)
212 2qol_A Ephrin receptor; recept 97.9 5.4E-06 1.8E-10 68.0 4.0 41 176-219 143-183 (373)
213 1rdq_E PKA C-alpha, CAMP-depen 97.9 9.6E-06 3.3E-10 66.0 5.5 40 177-219 138-177 (350)
214 3dls_A PAS domain-containing s 97.9 1.1E-05 3.8E-10 65.1 5.8 41 176-219 126-166 (335)
215 3uqc_A Probable conserved tran 97.9 5.4E-06 1.8E-10 65.5 3.8 39 179-220 128-166 (286)
216 2ivs_A Proto-oncogene tyrosine 97.9 7.5E-06 2.6E-10 65.0 4.7 40 177-219 147-186 (314)
217 3kvw_A DYRK2, dual specificity 97.9 6.2E-06 2.1E-10 68.9 4.3 40 177-219 197-236 (429)
218 4fr4_A YANK1, serine/threonine 97.9 1.1E-05 3.9E-10 66.5 5.8 42 176-220 111-152 (384)
219 4fdw_A Leucine rich hypothetic 97.9 3E-05 1E-09 64.3 8.4 107 1-121 244-355 (401)
220 4aw2_A Serine/threonine-protei 97.9 7.6E-06 2.6E-10 68.7 4.8 42 176-220 171-212 (437)
221 2c30_A Serine/threonine-protei 97.9 8.3E-06 2.8E-10 65.4 4.9 41 176-219 137-177 (321)
222 2nru_A Interleukin-1 receptor- 97.9 8.8E-06 3E-10 64.5 4.9 40 177-219 130-169 (307)
223 3p86_A Serine/threonine-protei 97.9 6.6E-06 2.3E-10 65.6 4.2 42 177-219 134-175 (309)
224 3cbl_A C-FES, proto-oncogene t 97.9 8.2E-06 2.8E-10 66.9 4.8 40 177-219 210-249 (377)
225 3ugc_A Tyrosine-protein kinase 97.9 6.4E-06 2.2E-10 64.9 4.0 40 177-219 111-150 (295)
226 3niz_A Rhodanese family protei 97.9 1.2E-05 4.1E-10 64.1 5.6 40 177-219 116-155 (311)
227 3lzb_A Epidermal growth factor 97.9 6.6E-06 2.3E-10 66.1 4.1 41 176-219 113-153 (327)
228 3kmu_A ILK, integrin-linked ki 97.9 5.3E-06 1.8E-10 64.3 3.4 42 177-219 108-149 (271)
229 2v62_A Serine/threonine-protei 97.9 7.9E-06 2.7E-10 66.1 4.5 41 176-219 147-187 (345)
230 3sxs_A Cytoplasmic tyrosine-pr 97.9 1.1E-05 3.7E-10 62.7 5.1 40 177-219 101-140 (268)
231 3n9x_A Phosphotransferase; mal 97.9 1.3E-05 4.4E-10 67.0 5.9 41 176-219 125-165 (432)
232 3qup_A Tyrosine-protein kinase 97.9 6.8E-06 2.3E-10 65.7 3.9 40 177-219 134-173 (323)
233 3ll6_A Cyclin G-associated kin 97.9 7.4E-06 2.5E-10 65.6 4.2 43 176-219 132-174 (337)
234 3tt0_A Basic fibroblast growth 97.9 7.2E-06 2.5E-10 67.4 4.0 40 177-219 188-227 (382)
235 4fvq_A Tyrosine-protein kinase 97.9 6.1E-06 2.1E-10 64.8 3.4 40 177-219 110-149 (289)
236 3v8s_A RHO-associated protein 97.9 9.8E-06 3.4E-10 67.4 4.8 41 177-220 165-205 (410)
237 3fxz_A Serine/threonine-protei 97.9 1.1E-05 3.7E-10 63.9 4.9 40 177-219 113-152 (297)
238 2r5t_A Serine/threonine-protei 97.9 9.8E-06 3.4E-10 66.5 4.7 40 177-219 136-175 (373)
239 2pmi_A Negative RE, cyclin-dep 97.9 1.1E-05 3.8E-10 64.4 4.9 39 178-219 106-144 (317)
240 3vhe_A Vascular endothelial gr 97.9 5.2E-06 1.8E-10 67.3 3.0 40 177-219 190-229 (359)
241 4ejn_A RAC-alpha serine/threon 97.9 9.5E-06 3.3E-10 68.1 4.7 40 177-219 245-285 (446)
242 3fe3_A MAP/microtubule affinit 97.9 1E-05 3.5E-10 65.2 4.7 40 177-219 111-150 (328)
243 1ob3_A PFPK5, cell division co 97.9 8.5E-06 2.9E-10 64.1 4.0 40 177-219 97-136 (288)
244 3ttj_A Mitogen-activated prote 97.9 8.2E-06 2.8E-10 69.0 4.0 40 177-219 161-200 (464)
245 2pvf_A Fibroblast growth facto 97.9 1.2E-05 4E-10 64.7 4.8 39 178-219 155-193 (334)
246 3mi9_A Cell division protein k 97.9 1.2E-05 4E-10 65.1 4.8 41 176-219 120-160 (351)
247 1mp8_A Focal adhesion kinase 1 97.9 6.8E-06 2.3E-10 64.4 3.3 40 177-219 113-152 (281)
248 3pls_A Macrophage-stimulating 97.9 8.8E-06 3E-10 64.1 4.0 41 176-219 120-160 (298)
249 1luf_A Muscle-specific tyrosin 97.9 6E-06 2.1E-10 66.4 3.0 40 177-219 171-210 (343)
250 3tki_A Serine/threonine-protei 97.9 1.2E-05 4.2E-10 64.5 4.8 40 177-219 102-141 (323)
251 3c1x_A Hepatocyte growth facto 97.9 8.9E-06 3E-10 66.7 4.0 40 177-219 189-228 (373)
252 4f0f_A Serine/threonine-protei 97.9 1.1E-05 3.7E-10 63.3 4.4 43 176-219 118-160 (287)
253 3brb_A Proto-oncogene tyrosine 97.9 9.3E-06 3.2E-10 64.5 4.0 40 177-219 144-183 (313)
254 4hgt_A Casein kinase I isoform 97.9 1.1E-05 3.9E-10 63.3 4.4 38 176-216 101-138 (296)
255 3gen_A Tyrosine-protein kinase 97.9 1.3E-05 4.3E-10 62.8 4.7 41 176-219 116-156 (283)
256 1p4o_A Insulin-like growth fac 97.9 9.7E-06 3.3E-10 64.7 4.1 39 178-219 136-174 (322)
257 1qpc_A LCK kinase; alpha beta 97.9 1.3E-05 4.6E-10 62.5 4.8 40 177-219 106-145 (279)
258 3zgw_A Maternal embryonic leuc 97.9 1.3E-05 4.4E-10 65.2 4.8 41 176-219 104-144 (347)
259 3e4g_A ATP synthase subunit S, 97.9 2.4E-06 8.2E-11 62.6 0.4 82 7-98 62-149 (176)
260 3dbq_A Dual specificity protei 97.9 1.2E-05 4.2E-10 64.9 4.7 41 175-218 103-143 (343)
261 3f66_A Hepatocyte growth facto 97.9 1.2E-05 4.3E-10 63.3 4.6 40 177-219 125-164 (298)
262 4eqm_A Protein kinase; transfe 97.9 1E-05 3.5E-10 64.0 4.0 40 177-219 108-147 (294)
263 1nxk_A MAP kinase-activated pr 97.9 1.3E-05 4.6E-10 66.3 4.9 39 177-218 158-196 (400)
264 3og7_A AKAP9-BRAF fusion prote 97.9 9.6E-06 3.3E-10 63.8 3.8 40 177-219 117-156 (289)
265 1qcf_A Haematopoetic cell kina 97.9 9.4E-06 3.2E-10 68.3 4.0 38 179-219 283-320 (454)
266 2eue_A Carbon catabolite derep 97.8 1.3E-05 4.6E-10 62.4 4.6 41 176-219 108-148 (275)
267 1vzo_A Ribosomal protein S6 ki 97.8 1E-05 3.4E-10 65.8 4.0 40 177-219 156-195 (355)
268 3h4j_B AMPK kdaid, SNF1-like p 97.8 1.5E-05 5E-10 64.6 4.9 41 176-219 104-144 (336)
269 2a19_B Interferon-induced, dou 97.8 1.7E-05 5.9E-10 61.8 5.2 41 176-219 118-158 (284)
270 3dtc_A Mitogen-activated prote 97.8 1.2E-05 4.2E-10 62.4 4.3 43 176-218 101-143 (271)
271 2wtk_C Serine/threonine-protei 97.8 2E-05 6.9E-10 62.2 5.6 41 176-219 105-145 (305)
272 2eva_A TAK1 kinase - TAB1 chim 97.8 1.1E-05 3.9E-10 64.1 4.1 42 178-219 100-141 (307)
273 4e5w_A Tyrosine-protein kinase 97.8 1.1E-05 3.9E-10 63.6 4.1 40 177-219 123-162 (302)
274 3a62_A Ribosomal protein S6 ki 97.8 1.4E-05 4.8E-10 64.2 4.7 39 178-219 119-157 (327)
275 3an0_A Dual specificity mitoge 97.8 1.2E-05 4E-10 64.8 4.2 41 176-219 149-190 (340)
276 1k9a_A Carboxyl-terminal SRC k 97.8 1.4E-05 4.8E-10 67.2 4.8 39 178-219 287-325 (450)
277 2buj_A Serine/threonine-protei 97.8 1.5E-05 5.3E-10 63.3 4.9 40 177-219 131-170 (317)
278 3c0i_A Peripheral plasma membr 97.8 1.4E-05 4.8E-10 64.9 4.7 39 178-219 128-166 (351)
279 3fme_A Dual specificity mitoge 97.8 9E-06 3.1E-10 63.8 3.4 41 176-219 105-146 (290)
280 2jii_A Serine/threonine-protei 97.8 8.7E-06 3E-10 66.0 3.4 41 176-219 155-195 (352)
281 1cm8_A Phosphorylated MAP kina 97.8 1.6E-05 5.4E-10 65.1 4.9 40 177-219 125-164 (367)
282 2b9h_A MAP kinase FUS3, mitoge 97.8 1.6E-05 5.3E-10 64.3 4.9 40 177-219 109-148 (353)
283 3ork_A Serine/threonine protei 97.8 1.1E-05 3.7E-10 64.2 3.9 41 176-219 112-152 (311)
284 3fdn_A Serine/threonine-protei 97.8 1.7E-05 5.9E-10 61.9 4.9 40 177-219 106-145 (279)
285 3llt_A Serine/threonine kinase 97.8 1.4E-05 4.9E-10 64.8 4.6 39 177-218 134-172 (360)
286 3mtl_A Cell division protein k 97.8 1.8E-05 6.3E-10 63.4 5.2 40 177-219 97-136 (324)
287 1b6c_B TGF-B superfamily recep 97.8 1.3E-05 4.3E-10 64.5 4.2 44 176-219 135-183 (342)
288 1u5q_A Serine/threonine protei 97.8 1.1E-05 3.8E-10 65.5 3.9 41 176-219 150-190 (348)
289 2acx_A G protein-coupled recep 97.8 1.5E-05 5.1E-10 69.1 4.9 41 177-220 283-323 (576)
290 2y0a_A Death-associated protei 97.8 1.7E-05 5.7E-10 63.7 4.9 40 177-219 111-150 (326)
291 3cok_A Serine/threonine-protei 97.8 1.8E-05 6.1E-10 61.7 4.9 40 177-219 109-148 (278)
292 2i1m_A Macrophage colony-stimu 97.8 9.9E-06 3.4E-10 65.0 3.5 39 178-219 162-200 (333)
293 4e7w_A Glycogen synthase kinas 97.8 1.5E-05 5.1E-10 65.8 4.6 39 176-217 137-175 (394)
294 1t46_A HOMO sapiens V-KIT hard 97.8 1.1E-05 3.9E-10 63.9 3.8 40 177-219 142-181 (313)
295 3qyz_A Mitogen-activated prote 97.8 1.7E-05 5.9E-10 64.6 4.9 41 176-219 124-164 (364)
296 3kn6_A Ribosomal protein S6 ki 97.8 2.2E-05 7.6E-10 63.0 5.4 41 176-219 102-142 (325)
297 3lxl_A Tyrosine-protein kinase 97.8 1.4E-05 4.6E-10 64.1 4.1 40 177-219 124-163 (327)
298 3sv0_A Casein kinase I-like; t 97.8 1.9E-05 6.7E-10 67.0 5.3 39 176-217 99-137 (483)
299 2yab_A Death-associated protei 97.8 2.7E-05 9.1E-10 63.6 5.8 41 176-219 111-151 (361)
300 2rku_A Serine/threonine-protei 97.8 2E-05 6.8E-10 62.0 4.9 40 177-219 112-151 (294)
301 2fst_X Mitogen-activated prote 97.8 1.4E-05 4.9E-10 65.4 4.1 40 177-219 129-168 (367)
302 3nsz_A CK II alpha, casein kin 97.8 1.8E-05 6.3E-10 63.3 4.7 38 179-219 129-166 (330)
303 1z57_A Dual specificity protei 97.8 1.9E-05 6.7E-10 63.1 4.8 38 178-218 116-153 (339)
304 1fvr_A Tyrosine-protein kinase 97.8 1.3E-05 4.6E-10 64.1 3.9 40 177-219 139-178 (327)
305 4fl3_A Tyrosine-protein kinase 97.8 1.4E-05 4.7E-10 70.2 4.2 39 178-219 467-505 (635)
306 1xbb_A Tyrosine-protein kinase 97.8 1.9E-05 6.5E-10 62.1 4.6 40 177-219 114-153 (291)
307 1opk_A P150, C-ABL, proto-onco 97.8 1.3E-05 4.3E-10 68.3 3.9 39 178-219 316-354 (495)
308 2owb_A Serine/threonine-protei 97.8 2E-05 7E-10 63.4 4.9 40 177-219 138-177 (335)
309 3uto_A Twitchin; kinase, muscl 97.8 1.7E-05 6E-10 68.7 4.7 37 179-218 254-290 (573)
310 2zmd_A Dual specificity protei 97.8 1.6E-05 5.5E-10 65.5 4.3 39 177-218 152-190 (390)
311 4agu_A Cyclin-dependent kinase 97.8 2.1E-05 7.2E-10 62.4 4.8 40 177-219 99-138 (311)
312 2ac3_A MAP kinase-interacting 97.8 1.6E-05 5.4E-10 63.2 4.0 40 177-219 108-147 (316)
313 1mqb_A Ephrin type-A receptor 97.8 1.6E-05 5.4E-10 64.0 4.0 41 176-219 143-183 (333)
314 3eb0_A Putative uncharacterize 97.8 2.5E-05 8.7E-10 64.0 5.3 41 175-218 136-176 (383)
315 4hcu_A Tyrosine-protein kinase 97.8 1.2E-05 4E-10 62.6 3.1 40 177-219 103-142 (269)
316 2w1i_A JAK2; chromosomal rearr 97.8 2.3E-05 7.8E-10 62.8 4.9 40 177-219 142-181 (326)
317 1u46_A ACK-1, activated CDC42 97.8 1.8E-05 6.1E-10 62.1 4.2 40 177-219 118-157 (291)
318 1tki_A Titin; serine kinase, m 97.8 2.3E-05 8E-10 62.8 4.9 39 177-218 99-137 (321)
319 2a2a_A Death-associated protei 97.8 2.3E-05 8E-10 62.6 4.9 40 177-219 112-151 (321)
320 3m2w_A MAP kinase-activated pr 97.8 2.4E-05 8.2E-10 61.9 4.8 39 177-218 114-152 (299)
321 3pg1_A Mitogen-activated prote 97.8 1.7E-05 5.9E-10 64.4 4.1 41 176-219 130-170 (362)
322 1byg_A CSK, protein (C-termina 97.8 1.7E-05 5.9E-10 61.9 3.9 39 178-219 115-153 (278)
323 1zth_A RIO1 serine protein kin 97.8 1.9E-05 6.4E-10 61.4 4.1 36 180-218 170-206 (258)
324 3uzp_A CKI-delta, CKID, casein 97.8 2.2E-05 7.4E-10 61.7 4.5 39 176-217 101-139 (296)
325 1ua2_A CAK, cell division prot 97.8 1.2E-05 4.3E-10 65.0 3.2 40 177-219 109-148 (346)
326 3lxp_A Non-receptor tyrosine-p 97.8 2.4E-05 8.3E-10 62.4 4.8 40 177-219 131-170 (318)
327 3cc6_A Protein tyrosine kinase 97.8 1.4E-05 4.8E-10 62.5 3.3 40 177-219 110-149 (281)
328 2xir_A Vascular endothelial gr 97.8 1.2E-05 4.2E-10 63.8 3.0 39 178-219 146-184 (316)
329 3c4z_A Rhodopsin kinase; Ser/T 97.8 2.3E-05 7.9E-10 67.5 4.9 40 178-220 287-326 (543)
330 1zy4_A Serine/threonine-protei 97.7 1.9E-05 6.4E-10 62.2 4.0 39 178-219 114-152 (303)
331 2eu9_A Dual specificity protei 97.7 2.5E-05 8.6E-10 62.9 4.8 38 177-217 120-157 (355)
332 1u59_A Tyrosine-protein kinase 97.7 2E-05 7E-10 61.8 4.2 40 177-219 107-146 (287)
333 2y94_A 5'-AMP-activated protei 97.7 3.5E-05 1.2E-09 65.4 5.8 41 176-219 112-152 (476)
334 1zar_A RIO2 kinase; serine kin 97.7 2.5E-05 8.6E-10 61.6 4.6 34 181-217 194-227 (282)
335 2vwi_A Serine/threonine-protei 97.7 2E-05 6.8E-10 62.1 4.0 40 177-219 118-157 (303)
336 2vgo_A Serine/threonine-protei 97.7 2.8E-05 9.6E-10 60.9 4.9 40 177-219 111-150 (284)
337 3uc3_A Serine/threonine-protei 97.7 2.3E-05 8E-10 63.9 4.5 40 177-219 113-152 (361)
338 2yex_A Serine/threonine-protei 97.7 2.8E-05 9.5E-10 60.4 4.8 39 178-219 103-141 (276)
339 2xrw_A Mitogen-activated prote 97.7 1.9E-05 6.6E-10 64.5 4.0 40 177-219 124-163 (371)
340 2bdw_A Hypothetical protein K1 97.7 2E-05 6.9E-10 64.3 4.1 40 177-219 125-164 (362)
341 2pzi_A Probable serine/threoni 97.7 2.3E-05 7.7E-10 69.3 4.7 40 177-219 179-218 (681)
342 3hko_A Calcium/calmodulin-depe 97.7 2.8E-05 9.7E-10 62.5 4.9 38 179-219 167-204 (345)
343 3kk8_A Calcium/calmodulin depe 97.7 2.9E-05 9.9E-10 60.7 4.8 40 177-219 102-141 (284)
344 2ozo_A Tyrosine-protein kinase 97.7 1.8E-05 6.3E-10 69.1 4.0 40 177-219 433-472 (613)
345 3coi_A Mitogen-activated prote 97.7 2.1E-05 7.3E-10 63.7 4.1 40 177-219 123-162 (353)
346 2r3i_A Cell division protein k 97.7 2.2E-05 7.6E-10 61.8 4.0 40 177-219 100-139 (299)
347 3bhy_A Death-associated protei 97.7 3E-05 1E-09 60.5 4.8 40 177-219 105-144 (283)
348 3rgf_A Cyclin-dependent kinase 97.7 2.1E-05 7.3E-10 65.0 4.1 36 178-216 126-161 (405)
349 3a99_A Proto-oncogene serine/t 97.7 2.8E-05 9.7E-10 62.1 4.7 38 177-217 146-183 (320)
350 4euu_A Serine/threonine-protei 97.7 2.9E-05 9.8E-10 62.0 4.7 37 177-216 109-145 (319)
351 1kob_A Twitchin; kinase, intra 97.7 2.8E-05 9.7E-10 64.1 4.7 39 177-218 146-184 (387)
352 1blx_A Cyclin-dependent kinase 97.7 2.3E-05 7.8E-10 62.5 4.1 40 177-219 117-156 (326)
353 2yfx_A Tyrosine-protein kinase 97.7 2.2E-05 7.6E-10 62.8 4.0 38 178-218 138-175 (327)
354 1fmk_A C-SRC, P60-SRC, tyrosin 97.7 1.5E-05 5E-10 67.1 3.0 39 178-219 278-316 (452)
355 3gbz_A Kinase, CMGC CDK; ssgci 97.7 2.4E-05 8.1E-10 62.9 4.1 38 177-217 129-166 (329)
356 4exu_A Mitogen-activated prote 97.7 2.3E-05 7.7E-10 64.1 4.0 40 177-219 141-180 (371)
357 2qr7_A Ribosomal protein S6 ki 97.7 4.3E-05 1.5E-09 61.9 5.7 38 177-217 113-150 (342)
358 3t9t_A Tyrosine-protein kinase 97.7 1.7E-05 5.8E-10 61.4 3.1 40 177-219 101-140 (267)
359 2y7j_A Phosphorylase B kinase 97.7 3.3E-05 1.1E-09 63.0 4.8 40 178-220 198-237 (365)
360 3i6u_A CDS1, serine/threonine- 97.7 3.2E-05 1.1E-09 64.4 4.7 38 178-218 237-274 (419)
361 4aaa_A Cyclin-dependent kinase 97.7 2.6E-05 8.8E-10 62.6 4.0 40 177-219 121-160 (331)
362 2rio_A Serine/threonine-protei 97.7 1.9E-05 6.5E-10 66.0 3.4 35 181-218 116-150 (434)
363 2pml_X PFPK7, Ser/Thr protein 97.7 3.6E-05 1.2E-09 62.0 4.9 39 178-219 149-188 (348)
364 2ycf_A Serine/threonine-protei 97.7 3.5E-05 1.2E-09 61.5 4.8 40 177-219 111-150 (322)
365 2vx3_A Dual specificity tyrosi 97.7 3.3E-05 1.1E-09 63.4 4.7 41 177-218 154-194 (382)
366 3fhr_A MAP kinase-activated pr 97.7 3.5E-05 1.2E-09 62.1 4.8 39 177-218 125-163 (336)
367 3a7i_A MST3 kinase, serine/thr 97.7 3.7E-05 1.3E-09 60.7 4.8 41 176-219 115-155 (303)
368 2h8h_A Proto-oncogene tyrosine 97.7 1.8E-05 6.1E-10 68.1 3.0 38 179-219 362-399 (535)
369 2j7t_A Serine/threonine-protei 97.7 2.8E-05 9.6E-10 61.3 4.0 40 177-219 114-153 (302)
370 3kfa_A Tyrosine-protein kinase 97.7 1.7E-05 5.7E-10 62.2 2.6 40 177-219 108-147 (288)
371 1t4h_A Serine/threonine-protei 97.7 3.2E-05 1.1E-09 60.7 4.2 40 177-217 126-165 (290)
372 3f3z_A Calcium/calmodulin-depe 97.7 4.2E-05 1.4E-09 59.6 4.9 37 177-216 103-139 (277)
373 2i6l_A Mitogen-activated prote 97.7 2.9E-05 9.9E-10 61.6 3.9 39 177-218 117-155 (320)
374 2iwi_A Serine/threonine-protei 97.7 3.3E-05 1.1E-09 61.3 4.2 38 177-217 136-173 (312)
375 2x4f_A Myosin light chain kina 97.7 4.1E-05 1.4E-09 62.8 4.9 36 178-216 185-220 (373)
376 2w5a_A Serine/threonine-protei 97.7 2.6E-05 9E-10 60.8 3.6 43 177-219 108-152 (279)
377 2y4i_B KSR2, HKSR2, kinase sup 97.7 2.9E-05 1E-09 61.7 3.8 39 177-218 127-165 (319)
378 1phk_A Phosphorylase kinase; g 97.7 4.4E-05 1.5E-09 60.0 4.8 40 177-219 121-160 (298)
379 1q8y_A SR protein kinase; tran 97.6 4.8E-05 1.6E-09 61.8 5.1 38 177-217 128-166 (373)
380 3com_A Serine/threonine-protei 97.6 4.7E-05 1.6E-09 60.4 4.9 41 176-219 121-161 (314)
381 2h34_A Serine/threonine-protei 97.6 3.3E-05 1.1E-09 61.4 4.0 40 177-219 131-170 (309)
382 3is5_A Calcium-dependent prote 97.6 3.2E-05 1.1E-09 60.7 3.8 40 176-218 120-159 (285)
383 3lm5_A Serine/threonine-protei 97.6 4.3E-05 1.5E-09 61.3 4.6 39 177-218 128-166 (327)
384 2j0j_A Focal adhesion kinase 1 97.6 2.6E-05 8.8E-10 68.8 3.3 39 178-219 489-527 (656)
385 3cek_A Dual specificity protei 97.6 4.3E-05 1.5E-09 60.7 4.3 40 176-218 123-162 (313)
386 2clq_A Mitogen-activated prote 97.6 5.2E-05 1.8E-09 59.5 4.7 38 178-218 120-157 (295)
387 3gxj_A TGF-beta receptor type- 97.6 4.7E-06 1.6E-10 65.7 -1.4 43 177-219 97-144 (303)
388 4eut_A Serine/threonine-protei 97.6 5E-05 1.7E-09 62.6 4.8 37 177-216 109-145 (396)
389 3soa_A Calcium/calmodulin-depe 97.6 4.2E-05 1.4E-09 64.2 4.3 39 177-218 107-145 (444)
390 2h6d_A 5'-AMP-activated protei 97.6 3.2E-05 1.1E-09 60.2 3.3 40 177-219 108-147 (276)
391 3e3p_A Protein kinase, putativ 97.6 5E-05 1.7E-09 61.5 4.4 42 176-218 125-166 (360)
392 2x7f_A TRAF2 and NCK-interacti 97.6 4.4E-05 1.5E-09 60.9 4.0 40 177-219 126-165 (326)
393 3rfe_A Platelet glycoprotein I 97.6 0.00017 6E-09 50.0 6.6 37 65-101 32-68 (130)
394 2wqm_A Serine/threonine-protei 97.6 4.6E-05 1.6E-09 60.4 4.0 40 177-219 133-172 (310)
395 3q5i_A Protein kinase; CDPK, m 97.6 5.8E-05 2E-09 64.3 4.8 41 176-219 142-182 (504)
396 3eqc_A Dual specificity mitoge 97.6 4.5E-05 1.5E-09 61.9 3.9 41 176-219 127-168 (360)
397 3p23_A Serine/threonine-protei 97.6 5E-05 1.7E-09 63.6 4.1 36 179-217 117-152 (432)
398 2dyl_A Dual specificity mitoge 97.6 4.4E-05 1.5E-09 60.6 3.6 40 177-219 121-161 (318)
399 3lij_A Calcium/calmodulin depe 97.6 6.4E-05 2.2E-09 63.8 4.8 39 177-218 133-171 (494)
400 3aln_A Dual specificity mitoge 97.6 4.1E-05 1.4E-09 61.2 3.4 41 176-219 121-162 (327)
401 3en9_A Glycoprotease, O-sialog 97.6 5.4E-05 1.8E-09 65.2 4.3 34 182-218 433-466 (540)
402 2w4o_A Calcium/calmodulin-depe 97.5 5.5E-05 1.9E-09 61.3 4.1 39 177-218 145-183 (349)
403 3rfe_A Platelet glycoprotein I 97.5 0.00017 6E-09 50.0 5.8 58 67-126 11-70 (130)
404 3nyv_A Calmodulin-domain prote 97.5 8.2E-05 2.8E-09 62.9 4.8 39 176-217 122-160 (484)
405 2ra8_A Uncharacterized protein 97.5 1.2E-05 4E-10 65.8 -0.6 93 3-102 216-321 (362)
406 2wei_A Calmodulin-domain prote 97.5 7.8E-05 2.7E-09 58.4 4.0 39 177-218 118-156 (287)
407 3mwu_A Calmodulin-domain prote 97.5 7.4E-05 2.5E-09 63.3 3.8 39 177-218 118-156 (486)
408 2jam_A Calcium/calmodulin-depe 97.4 0.00011 3.8E-09 58.0 3.9 37 177-216 103-139 (304)
409 4gyi_A RIO2 kinase; protein ki 97.4 8.4E-05 2.9E-09 61.2 3.0 36 181-219 206-241 (397)
410 3qa8_A MGC80376 protein; kinas 97.2 0.0002 7E-09 63.0 3.7 39 178-219 119-157 (676)
411 4fs7_A Uncharacterized protein 97.1 0.0017 5.9E-08 53.3 8.0 94 1-98 66-195 (394)
412 3e4g_A ATP synthase subunit S, 97.1 8.4E-05 2.9E-09 54.3 0.0 94 22-125 53-153 (176)
413 4gt6_A Cell surface protein; l 97.0 0.0027 9.1E-08 52.2 8.4 106 1-121 260-367 (394)
414 1pgv_A TMD-1, tropomodulin TMD 96.9 0.00034 1.2E-08 52.0 2.0 88 5-98 40-136 (197)
415 4gt6_A Cell surface protein; l 96.8 0.0027 9.3E-08 52.1 6.6 104 1-119 283-386 (394)
416 4h09_A Hypothetical leucine ri 96.6 0.012 3.9E-07 47.9 9.5 61 58-120 280-342 (379)
417 4fs7_A Uncharacterized protein 96.6 0.0069 2.4E-07 49.7 8.1 39 59-98 315-353 (394)
418 1pgv_A TMD-1, tropomodulin TMD 96.6 0.001 3.4E-08 49.5 2.4 92 4-101 68-170 (197)
419 4h09_A Hypothetical leucine ri 96.5 0.0055 1.9E-07 49.8 6.8 84 3-98 260-343 (379)
420 2ks1_B Epidermal growth factor 95.6 0.02 7E-07 31.2 4.1 27 149-175 13-39 (44)
421 2l2t_A Receptor tyrosine-prote 95.4 0.03 1E-06 30.6 4.3 28 148-175 11-38 (44)
422 2k1k_A Ephrin type-A receptor 95.2 0.045 1.6E-06 28.9 4.5 23 145-167 8-30 (38)
423 2jwa_A Receptor tyrosine-prote 94.8 0.061 2.1E-06 29.3 4.4 28 147-174 11-38 (44)
424 3tm0_A Aminoglycoside 3'-phosp 90.2 0.32 1.1E-05 36.9 4.4 18 202-219 183-200 (263)
425 2k9y_A Ephrin type-A receptor 89.3 0.44 1.5E-05 25.4 3.3 10 150-159 16-25 (41)
426 3dxp_A Putative acyl-COA dehyd 88.4 0.58 2E-05 37.4 4.9 18 202-219 216-233 (359)
427 1nd4_A Aminoglycoside 3'-phosp 88.2 0.35 1.2E-05 36.4 3.3 19 201-219 183-201 (264)
428 1iij_A ERBB-2 receptor protein 82.3 0.49 1.7E-05 24.3 1.0 8 166-173 26-33 (35)
429 3sg8_A APH(2'')-ID; antibiotic 78.2 2.6 9E-05 32.7 4.6 19 200-218 189-207 (304)
430 2klu_A T-cell surface glycopro 77.6 0.31 1.1E-05 28.7 -0.7 24 190-213 45-68 (70)
431 2l34_A TYRO protein tyrosine k 69.0 7.6 0.00026 19.5 3.3 23 148-170 7-29 (33)
432 2l9u_A Receptor tyrosine-prote 67.0 6.6 0.00023 19.8 2.8 22 151-172 10-31 (40)
433 2q83_A YTAA protein; 2635576, 64.0 4.7 0.00016 31.4 3.1 18 201-218 221-238 (346)
434 3r70_A Aminoglycoside phosphot 56.1 14 0.00048 28.7 4.6 19 201-219 206-224 (320)
435 2klu_A T-cell surface glycopro 55.7 15 0.00053 21.5 3.4 10 153-162 12-21 (70)
436 3f7w_A Putative fructosamine-3 55.5 3.8 0.00013 31.5 1.1 22 198-219 184-205 (288)
437 2knc_B Integrin beta-3; transm 51.5 13 0.00045 22.8 2.9 11 152-162 12-22 (79)
438 2lz0_A Uncharacterized protein 50.5 18 0.0006 23.1 3.5 47 17-74 7-53 (100)
439 2pyw_A Uncharacterized protein 47.3 12 0.00042 30.4 2.9 19 201-219 231-249 (420)
440 2lp1_A C99; alzheimer'S D memb 51.6 4.3 0.00015 26.7 0.0 10 150-159 32-41 (122)
441 4gkh_A Aminoglycoside 3'-phosp 43.9 8.5 0.00029 28.9 1.4 19 201-219 192-210 (272)
442 3csv_A Aminoglycoside phosphot 39.4 37 0.0013 26.3 4.6 18 201-218 182-199 (333)
443 3d1u_A Putative fructosamine-3 38.8 27 0.00093 26.8 3.6 20 199-218 185-204 (288)
444 3ovc_A Hygromycin-B 4-O-kinase 37.8 13 0.00045 29.7 1.7 18 202-219 213-230 (362)
445 3ats_A Putative uncharacterize 35.8 13 0.00043 29.4 1.3 18 201-218 221-238 (357)
446 2ppq_A HSK, HK, homoserine kin 35.4 11 0.00037 29.3 0.8 19 201-219 186-204 (322)
447 2k9j_B Integrin beta-3; transm 35.0 46 0.0016 17.6 3.1 13 151-163 10-22 (43)
448 3tdw_A Gentamicin resistance p 35.0 14 0.00046 28.7 1.3 19 200-218 188-206 (306)
449 2llm_A Amyloid beta A4 protein 38.7 9.4 0.00032 20.3 0.0 15 150-164 19-33 (43)
450 2olc_A MTR kinase, methylthior 31.8 30 0.001 27.7 2.9 19 201-219 226-244 (397)
451 3c5i_A Choline kinase; choline 30.9 35 0.0012 27.0 3.1 19 201-219 211-229 (369)
452 3jr1_A Putative fructosamine-3 28.6 36 0.0012 26.6 2.8 20 200-219 205-224 (312)
453 1zyl_A Hypothetical protein YI 27.6 50 0.0017 25.4 3.5 17 201-217 194-210 (328)
454 3hd7_A Vesicle-associated memb 22.1 65 0.0022 20.1 2.6 15 154-168 73-87 (91)
455 1pfi_A Major coat protein of P 21.8 99 0.0034 16.2 3.0 19 150-168 22-40 (46)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.86 E-value=1.2e-21 Score=175.59 Aligned_cols=126 Identities=26% Similarity=0.503 Sum_probs=114.7
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIP 81 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p 81 (220)
++.+++|++|||++|+++|.+|.+|+++++|+.|+|++|+++|.+|+. ++.+++|+.||+++|+++|.+|
T Consensus 628 ~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~----------l~~L~~L~~LdLs~N~l~g~ip 697 (768)
T 3rgz_A 628 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDE----------VGDLRGLNILDLSSNKLDGRIP 697 (768)
T ss_dssp CSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGG----------GGGCTTCCEEECCSSCCEECCC
T ss_pred hhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChH----------HhCCCCCCEEECCCCcccCcCC
Confidence 567889999999999999999999999999999999999999999985 5677899999999999999999
Q ss_pred ccccCCCCCCeeeccCCcccccCCCCcccccccccccccccCCCCCCCCCCCCccCCCC
Q 038318 82 KSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWNYTLCGPPRLQVPSCKEDNS 140 (220)
Q Consensus 82 ~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n~~l~~~~~~~~~~c~~~~~ 140 (220)
..+..+++|++|++++|+++|.+|..+.+.++....+.+|+.+||.+ .+.|.....
T Consensus 698 ~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~---l~~C~~~~~ 753 (768)
T 3rgz_A 698 QAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP---LPRCDPSNA 753 (768)
T ss_dssp GGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT---SCCCCSCC-
T ss_pred hHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCC---CcCCCCCcc
Confidence 99999999999999999999999998888899999999999999975 237865443
No 2
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.82 E-value=3e-20 Score=150.04 Aligned_cols=127 Identities=26% Similarity=0.453 Sum_probs=87.6
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCc-cC------------------------
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLK-VL------------------------ 56 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L------------------------ 56 (220)
|.++++|++|+|++|++++.+|..+..+++|++|++++|.++|.+|..++.++ .|
T Consensus 121 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~ 200 (313)
T 1ogq_A 121 LSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA 200 (313)
T ss_dssp GGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS
T ss_pred HhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCccc
Confidence 34455555556655555555555555555555555555555555555554443 22
Q ss_pred ------------------------------------hhhhcCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCCcc
Q 038318 57 ------------------------------------VDCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKL 100 (220)
Q Consensus 57 ------------------------------------p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l 100 (220)
+..+..+++|++|++++|.+++.+|..+..+++|+.|++++|++
T Consensus 201 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 280 (313)
T 1ogq_A 201 FVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNL 280 (313)
T ss_dssp EEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEE
T ss_pred EEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcc
Confidence 22345566777777777888778888888888888888888888
Q ss_pred cccCCCCcccccccccccccccCCCCCC
Q 038318 101 EEEIPIERPLRNILAQSFIWNYTLCGPP 128 (220)
Q Consensus 101 ~~~~p~~~~~~~l~~l~~~~n~~l~~~~ 128 (220)
+|.+|....+++++.+++.+|+.+||.+
T Consensus 281 ~~~ip~~~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 281 CGEIPQGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp EEECCCSTTGGGSCGGGTCSSSEEESTT
T ss_pred cccCCCCccccccChHHhcCCCCccCCC
Confidence 8888887778888888888998888864
No 3
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.78 E-value=2.1e-19 Score=161.14 Aligned_cols=72 Identities=28% Similarity=0.425 Sum_probs=38.0
Q ss_pred hhhhcCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCCCCC
Q 038318 57 VDCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCGPPR 129 (220)
Q Consensus 57 p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~~~~ 129 (220)
|..++.+++|+.|++++|+++|.+|..++++++|+.||+++|+++|.+|.. ..++.|+.+++++| .+.|.+|
T Consensus 649 p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N-~l~g~iP 721 (768)
T 3rgz_A 649 PKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN-NLSGPIP 721 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSS-EEEEECC
T ss_pred CHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCC-cccccCC
Confidence 444555555555555555555555555555555555555555555555544 44555555555555 4444443
No 4
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.77 E-value=2.4e-18 Score=134.52 Aligned_cols=124 Identities=21% Similarity=0.224 Sum_probs=72.3
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLE 67 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~ 67 (220)
|.++++|++|+|++|++++..|..|..+++|++|++++|.+++..+..+..+++| +..+..+++|+
T Consensus 55 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 134 (251)
T 3m19_A 55 FRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLK 134 (251)
T ss_dssp TTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCccc
Confidence 4566666777777777666555566666677777777777664444444444443 33345566666
Q ss_pred EEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCC
Q 038318 68 FLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLC 125 (220)
Q Consensus 68 ~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~ 125 (220)
+|++++|.+++..+..|..+++|++|++++|++++..+.. ..+++++.+++++|+..|
T Consensus 135 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 135 ELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred EEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 6666666666444445556666666666666666444333 445556666666664444
No 5
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=1.6e-18 Score=133.19 Aligned_cols=119 Identities=19% Similarity=0.206 Sum_probs=84.3
Q ss_pred CCceecCCCccCCccC-hhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCCEEecc
Q 038318 8 LRTPHLGSNNLTSSIS-LSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLEFLDIS 72 (220)
Q Consensus 8 L~~L~Ls~n~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~~L~ls 72 (220)
+++|+|++|++++..| ..|..+++|++|+|++|.+++..|..+..+++| |..|..+++|++|+++
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 4455555555553322 224455555555555555554333344444433 3457889999999999
Q ss_pred CCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCC
Q 038318 73 NNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 73 ~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~ 126 (220)
+|.+++..|..|..+++|+.|++++|++++..|.. ..+++++.+++++|+..|.
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 99999888999999999999999999999877766 7788999999999977664
No 6
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=2.2e-18 Score=132.31 Aligned_cols=120 Identities=24% Similarity=0.288 Sum_probs=85.7
Q ss_pred CCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCCEEecc
Q 038318 7 YLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLEFLDIS 72 (220)
Q Consensus 7 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~~L~ls 72 (220)
+|+.|+|++|++++..|..|..+++|++|+|++|++++..|..+..+++| +..|..+++|+.|+++
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 112 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 112 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECC
Confidence 45555555555553333445555555555555555554445545444443 2346789999999999
Q ss_pred CCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCC
Q 038318 73 NNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 73 ~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~ 126 (220)
+|.+++..|..|..+++|+.|++++|++++..+.. ..+++++.+++++|+..|.
T Consensus 113 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 113 ANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 99999888889999999999999999999766654 6788899999999987774
No 7
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.75 E-value=9.5e-18 Score=132.71 Aligned_cols=124 Identities=26% Similarity=0.186 Sum_probs=74.5
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLE 67 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~ 67 (220)
+..+++|++|+|++|++++..|..|..+++|++|++++|++++..|..++.+++| |..++.+++|+
T Consensus 81 l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 160 (272)
T 3rfs_A 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLT 160 (272)
T ss_dssp GTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCC
Confidence 3456666666666666665555555666666666666666664444444444444 33456666666
Q ss_pred EEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCC
Q 038318 68 FLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLC 125 (220)
Q Consensus 68 ~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~ 125 (220)
.|++++|++++..+..+..+++|+.|++++|++++..|.. ..+++++.+++++|+..|
T Consensus 161 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 161 ELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred EEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 6666666666555555566666666666666666554443 556666666666665444
No 8
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.74 E-value=1.3e-18 Score=140.52 Aligned_cols=118 Identities=24% Similarity=0.414 Sum_probs=56.9
Q ss_pred CCCCCCCceecCC-CccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCC
Q 038318 3 GSLTYLRTPHLGS-NNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLE 67 (220)
Q Consensus 3 ~~l~~L~~L~Ls~-n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~ 67 (220)
+++++|++|+|++ |++++.+|..|.++++|++|++++|.+++.+|..+..+++| |..+..+++|+
T Consensus 73 ~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 152 (313)
T 1ogq_A 73 ANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLV 152 (313)
T ss_dssp GGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCC
T ss_pred hCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCC
Confidence 3445555555552 55555555555555555555555555554555544444443 44444455555
Q ss_pred EEeccCCcccccCCccccCCC-CCCeeeccCCcccccCCCC-cccccccccccccc
Q 038318 68 FLDISNNNLFGKIPKSFKGLS-RLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 68 ~L~ls~N~l~~~~p~~~~~l~-~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n 121 (220)
+|++++|.+++.+|..+..++ +|+.|++++|++++..|.. ..+. ++.+++++|
T Consensus 153 ~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N 207 (313)
T 1ogq_A 153 GITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRN 207 (313)
T ss_dssp EEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSS
T ss_pred eEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCC
Confidence 555555555444454444444 4455555555544444433 2222 444444444
No 9
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.74 E-value=6.1e-18 Score=137.38 Aligned_cols=118 Identities=17% Similarity=0.158 Sum_probs=68.9
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhc---------CccC-------------hhh
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEK---------LKVL-------------VDC 59 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~---------l~~L-------------p~~ 59 (220)
|+++++|++|+|++|+++ .+|..+..+++|++|++++|++.+.+|..++. +++| |..
T Consensus 123 ~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~ 201 (328)
T 4fcg_A 123 MQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPAS 201 (328)
T ss_dssp GGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGG
T ss_pred HhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHh
Confidence 456677777777777777 66777777777777777776666666665432 3333 445
Q ss_pred hcCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccc
Q 038318 60 FGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 60 ~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n 121 (220)
++.+++|++|++++|.++ .+|..+..+++|++|++++|++.+.+|.. ..+++|+.+++++|
T Consensus 202 l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n 263 (328)
T 4fcg_A 202 IANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDC 263 (328)
T ss_dssp GGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTC
T ss_pred hcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCC
Confidence 555555555555555555 23444555555555555555555555444 44455555555554
No 10
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.74 E-value=1.8e-17 Score=127.94 Aligned_cols=120 Identities=20% Similarity=0.181 Sum_probs=91.1
Q ss_pred CCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCCEEec
Q 038318 6 TYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLEFLDI 71 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~~L~l 71 (220)
++|++|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++| +..|..+++|++|++
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 568888888888887777778888888888888888863333444555544 445678888888888
Q ss_pred cCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCC
Q 038318 72 SNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 72 s~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~ 126 (220)
++|.++ .+|..+..+++|++|++++|++++..+.. ..+++++.+++++|+..|.
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 888888 77888888888888888888888654443 6677888888888876664
No 11
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.73 E-value=2.4e-17 Score=124.04 Aligned_cols=110 Identities=25% Similarity=0.259 Sum_probs=96.9
Q ss_pred CCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCcccc
Q 038318 6 TYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFK 85 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 85 (220)
++|++|+|++|+++ .+|..|..+++|++|+|++|.+++..+. .|..+++|++|++++|.+++..|..|.
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~----------~f~~l~~L~~L~Ls~N~l~~i~~~~f~ 99 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQ----------SFSNMTQLLTLILSYNRLRCIPPRTFD 99 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTT----------TTTTCTTCCEEECCSSCCCBCCTTTTT
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHh----------HccCCCCCCEEECCCCccCEeCHHHhC
Confidence 47899999999998 8889999999999999999999955544 467889999999999999988888999
Q ss_pred CCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCC
Q 038318 86 GLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 86 ~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~ 126 (220)
.+++|+.|++++|+++...+.. ..+++++.+++++|+..|.
T Consensus 100 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 100 GLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp TCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 9999999999999999655543 6788999999999988774
No 12
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=2.3e-17 Score=124.01 Aligned_cols=110 Identities=22% Similarity=0.285 Sum_probs=95.2
Q ss_pred CCCceecCCCccCCccCh-hhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCcccc
Q 038318 7 YLRTPHLGSNNLTSSISL-SLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFK 85 (220)
Q Consensus 7 ~L~~L~Ls~n~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 85 (220)
+|++|++++|++++..|. .|..+++|++|+|++|++++..|. .|..+++|++|++++|++++..|..|.
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~----------~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 99 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPN----------AFEGASHIQELQLGENKIKEISNKMFL 99 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTT----------TTTTCTTCCEEECCSCCCCEECSSSST
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHh----------HcCCcccCCEEECCCCcCCccCHHHhc
Confidence 789999999999855554 388999999999999999977676 467788999999999999988888899
Q ss_pred CCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCC
Q 038318 86 GLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 86 ~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~ 126 (220)
++++|++|++++|++++..|.. ..+++++.+++++|+..|.
T Consensus 100 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 100 GLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp TCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 9999999999999999887876 7788999999999976654
No 13
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.73 E-value=4.1e-17 Score=128.85 Aligned_cols=123 Identities=23% Similarity=0.215 Sum_probs=77.0
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLE 67 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~ 67 (220)
|.++++|++|+|++|+++...+..|..+++|++|++++|.+++..+..+..+++| |..|..+++|+
T Consensus 57 ~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 136 (270)
T 2o6q_A 57 FHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLT 136 (270)
T ss_dssp SSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCC
Confidence 5667777777777777774333445667777777777777764444444555444 44566667777
Q ss_pred EEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCC
Q 038318 68 FLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLC 125 (220)
Q Consensus 68 ~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~ 125 (220)
+|++++|.+++..+..|..+++|+.|++++|++++..+.. ..+++++.+++++| .+.
T Consensus 137 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N-~l~ 194 (270)
T 2o6q_A 137 YLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNN-QLK 194 (270)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS-CCS
T ss_pred EEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCC-cCC
Confidence 7777777776544455666677777777777666544432 45566666666666 444
No 14
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.72 E-value=1.8e-17 Score=134.62 Aligned_cols=117 Identities=21% Similarity=0.238 Sum_probs=75.0
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhc------
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFG------ 61 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~------ 61 (220)
++++++|++|+|++|+++ .+|..++.+++|++|++++|.++ .+|..++.+++| |..+.
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~ 177 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CC
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchh
Confidence 344666777777777776 66666666777777777777766 666666666555 44333
Q ss_pred ---CCCCCCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCCcccccccccccccc
Q 038318 62 ---SLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWN 121 (220)
Q Consensus 62 ---~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n 121 (220)
.+++|++|++++|.++ .+|..+..+++|++|++++|++++..+....+++|+.+++++|
T Consensus 178 ~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n 239 (328)
T 4fcg_A 178 EHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGC 239 (328)
T ss_dssp CEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTC
T ss_pred hhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCC
Confidence 3666777777777666 6666666667777777777776643222255666666676666
No 15
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.72 E-value=2.2e-17 Score=131.30 Aligned_cols=120 Identities=22% Similarity=0.296 Sum_probs=73.0
Q ss_pred CCCCCCCCceecCCCc-cCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCC
Q 038318 2 LGSLTYLRTPHLGSNN-LTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSL 66 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L 66 (220)
|.++++|++|++++|. ++...|..|..+++|++|++++|.+++..|..+..+++| +..+..+++|
T Consensus 76 ~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 155 (285)
T 1ozn_A 76 FTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNL 155 (285)
T ss_dssp TTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred cCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCc
Confidence 4556666667776665 554445666666666666666666665555555555544 3345666666
Q ss_pred CEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccc
Q 038318 67 EFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 67 ~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n 121 (220)
++|++++|.+++..+..+..+++|+.|++++|++++..|.. ..+++++.+++++|
T Consensus 156 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 211 (285)
T 1ozn_A 156 THLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211 (285)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCC
Confidence 66666666666544445666666666666666666554544 45556666666666
No 16
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.70 E-value=1e-16 Score=127.97 Aligned_cols=121 Identities=26% Similarity=0.236 Sum_probs=73.9
Q ss_pred CCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCCEE
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLEFL 69 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~~L 69 (220)
.+++|++|+|++|+++ .+|..+..+++|++|++++|++++..|..+..+++| +..|..+++|+.|
T Consensus 75 ~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 153 (290)
T 1p9a_G 75 TLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153 (290)
T ss_dssp CCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEE
Confidence 4555666666666665 556666666666666666666664444445554444 3445666667777
Q ss_pred eccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCC
Q 038318 70 DISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 70 ~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~ 126 (220)
++++|++++..+..|..+++|+.|++++|+++ .+|.. .....++.+++++||..|.
T Consensus 154 ~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 154 SLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp ECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred ECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 77777666444444566666777777777766 34444 4455666677777766663
No 17
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.70 E-value=1.9e-16 Score=123.68 Aligned_cols=122 Identities=22% Similarity=0.270 Sum_probs=102.6
Q ss_pred CCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCCEEec
Q 038318 6 TYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLEFLDI 71 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~~L~l 71 (220)
++++.|+|++|++++..|..|..+++|++|+|++|.+++..|..+..+++| +..|..+++|++|++
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 468999999999998888889999999999999999998777777777666 567788899999999
Q ss_pred cCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCCCC
Q 038318 72 SNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCGPP 128 (220)
Q Consensus 72 s~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~~~ 128 (220)
++|.+++..+..|..+++|+.|++++|++++..+.. ..+++++.+++++| .+.+.+
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~ 171 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTN-QLQSVP 171 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-CCSCCC
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCC-cCCccC
Confidence 999998766667788999999999999998665544 67788999999998 565544
No 18
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.70 E-value=1.9e-16 Score=120.25 Aligned_cols=122 Identities=21% Similarity=0.151 Sum_probs=86.7
Q ss_pred CCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCCEEe
Q 038318 5 LTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLEFLD 70 (220)
Q Consensus 5 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~~L~ 70 (220)
.++|++|++++|++++..+..|..+++|++|++++|++++..+..+..+++| +..+..+++|++|+
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 106 (208)
T 2o6s_A 27 PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELA 106 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEE
Confidence 3457777777777775545556677777777777777774433334444444 34567888899999
Q ss_pred ccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCC
Q 038318 71 ISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 71 ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~ 126 (220)
+++|.+++..+..+..+++|+.|++++|++++..+.. ..+++++.+++++|+..|.
T Consensus 107 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 163 (208)
T 2o6s_A 107 LNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 163 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC
T ss_pred cCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC
Confidence 9999888766666788888999999999888655543 6678888888888865553
No 19
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.69 E-value=4.1e-16 Score=123.12 Aligned_cols=119 Identities=23% Similarity=0.247 Sum_probs=76.2
Q ss_pred CCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCCEEecc
Q 038318 7 YLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLEFLDIS 72 (220)
Q Consensus 7 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~~L~ls 72 (220)
+|+.|+|++|++++..+..|..+++|++|++++|.++...+..+..+++| +..+..+++|++|+++
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 46777777777775545567777777777777777763333333444444 3456667777777777
Q ss_pred CCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCC
Q 038318 73 NNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 73 ~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~ 126 (220)
+|.+++..+..|..+++|++|++++|++++..+.. ..+++|+.+++++| .+.+
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~~ 171 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNN-QLKR 171 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-CCSC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCC-cCcE
Confidence 77777666666677777777777777776544332 55667777777776 4443
No 20
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=2.9e-17 Score=123.45 Aligned_cols=117 Identities=23% Similarity=0.276 Sum_probs=95.2
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIP 81 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p 81 (220)
|+.+++|++|+|++|++++..|..|..+++|++|+|++|++++..|. .|..+++|++|++++|++++..|
T Consensus 50 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~----------~~~~l~~L~~L~L~~N~l~~~~~ 119 (192)
T 1w8a_A 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNK----------MFLGLHQLKTLNLYDNQISCVMP 119 (192)
T ss_dssp GGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSS----------SSTTCTTCCEEECCSSCCCEECT
T ss_pred cccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHH----------HhcCCCCCCEEECCCCcCCeeCH
Confidence 67899999999999999988899999999999999999999966665 45778899999999999999999
Q ss_pred ccccCCCCCCeeeccCCcccccCCCCcccccccccccccccCCCCCC
Q 038318 82 KSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWNYTLCGPP 128 (220)
Q Consensus 82 ~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n~~l~~~~ 128 (220)
..+..+++|++|++++|.+++..+.......+....+.++...|+.+
T Consensus 120 ~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 120 GSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp TSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred HHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 99999999999999999999765532111123333444454556544
No 21
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.69 E-value=3.4e-16 Score=123.75 Aligned_cols=125 Identities=25% Similarity=0.325 Sum_probs=102.6
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLE 67 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~ 67 (220)
+..+++|++|++++|++++ + +.+..+++|++|++++|.+++..+..++.+++| |..+..+++|+
T Consensus 59 l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 136 (272)
T 3rfs_A 59 IQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLT 136 (272)
T ss_dssp GGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCC
Confidence 5678999999999999985 4 478999999999999999996666666776666 55678889999
Q ss_pred EEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCCCCC
Q 038318 68 FLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCGPPR 129 (220)
Q Consensus 68 ~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~~~~ 129 (220)
+|++++|.+++..+..+..+++|+.|++++|++++..+.. ..+++++.+++++| .+.+.++
T Consensus 137 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~~ 198 (272)
T 3rfs_A 137 YLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN-QLKSVPD 198 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-CCSCCCT
T ss_pred EEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC-cCCccCH
Confidence 9999999998777777888999999999999998766554 67888999999988 5665443
No 22
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.69 E-value=2.5e-16 Score=125.10 Aligned_cols=124 Identities=21% Similarity=0.233 Sum_probs=89.6
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCC-CCCCCChhhhcCccC--------------hhhhcCCCCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNS-LSGFLPSNIEKLKVL--------------VDCFGSLTSL 66 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L--------------p~~~~~l~~L 66 (220)
|.++++|++|+|++|.+++..|..|..+++|++|++++|. ++...|..+..+++| |..+..+++|
T Consensus 52 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 131 (285)
T 1ozn_A 52 FRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAAL 131 (285)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred cccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCC
Confidence 5677888888888888886667778888888888888886 664446666666555 5567777777
Q ss_pred CEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCC
Q 038318 67 EFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 67 ~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~ 126 (220)
++|++++|.+++..+..+..+++|++|++++|++++..+.. ..+++++.+++++| .+.+
T Consensus 132 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n-~l~~ 191 (285)
T 1ozn_A 132 QYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQN-RVAH 191 (285)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS-CCCE
T ss_pred CEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCC-cccc
Confidence 88888887777655566777777888888887777544433 56677777777777 4443
No 23
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.68 E-value=7.9e-17 Score=129.24 Aligned_cols=125 Identities=22% Similarity=0.305 Sum_probs=81.1
Q ss_pred CCCCCCCCceecCCCccCCccC-hhhhccccCCeeeccCCCCCCCCChhhhcCccC---------------hhhhcCCCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSIS-LSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL---------------VDCFGSLTS 65 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L---------------p~~~~~l~~ 65 (220)
+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..|..+..+++| |..+..+++
T Consensus 97 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 176 (306)
T 2z66_A 97 FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRN 176 (306)
T ss_dssp EETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT
T ss_pred cCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcC
Confidence 3456677777777777764333 456667777777777777666666555555544 455666777
Q ss_pred CCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCCC
Q 038318 66 LEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCGP 127 (220)
Q Consensus 66 L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~~ 127 (220)
|++|++++|.+++..|..+..+++|+.|++++|++++..+.. ..+++++.+++++| .+.+.
T Consensus 177 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~ 238 (306)
T 2z66_A 177 LTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLN-HIMTS 238 (306)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTS-CCCBC
T ss_pred CCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCC-CCccc
Confidence 777777777777666777777777777777777776543322 45667777777777 44443
No 24
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.68 E-value=1.9e-16 Score=133.54 Aligned_cols=122 Identities=20% Similarity=0.182 Sum_probs=105.4
Q ss_pred CCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCCEEec
Q 038318 6 TYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLEFLDI 71 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~~L~l 71 (220)
++|++|++++|++++.+|..+..+++|++|++++|.+++..|..+..+++| |..+..+++|++|++
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 578899999999988888888889999999999999987777777777666 678899999999999
Q ss_pred cCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCCC
Q 038318 72 SNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCGP 127 (220)
Q Consensus 72 s~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~~ 127 (220)
++|.+++..|..|..+++|++|++++|++++..+.. ..+++++.+++++|+..|..
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 411 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 411 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCC
Confidence 999999888999999999999999999999755544 67889999999999766653
No 25
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=5.6e-16 Score=114.73 Aligned_cols=112 Identities=23% Similarity=0.204 Sum_probs=93.6
Q ss_pred CCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCccc
Q 038318 5 LTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSF 84 (220)
Q Consensus 5 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~~ 84 (220)
.++|++|++++|++++..+..|..+++|++|++++|.+++ +|.. .+..+++|++|++++|.+++..+..+
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~---------~~~~l~~L~~L~l~~N~l~~~~~~~~ 96 (177)
T 2o6r_A 27 PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQS-LPDG---------VFDKLTKLTILYLHENKLQSLPNGVF 96 (177)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC-CCTT---------TTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceE-eChh---------HccCCCccCEEECCCCCccccCHHHh
Confidence 4689999999999996666678899999999999999984 4432 35778899999999999997777778
Q ss_pred cCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCC
Q 038318 85 KGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 85 ~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~ 126 (220)
..+++|++|++++|++++..+.. ..+++++.+++++|+..|.
T Consensus 97 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 97 DKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred hCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 99999999999999999655543 6688999999999966553
No 26
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.67 E-value=4.3e-16 Score=118.22 Aligned_cols=122 Identities=25% Similarity=0.239 Sum_probs=100.3
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLE 67 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~ 67 (220)
|.++++|++|++++|++++..+..|..+++|++|++++|.+++..+..+..+++| +..+..+++|+
T Consensus 48 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 127 (208)
T 2o6s_A 48 FDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLK 127 (208)
T ss_dssp TTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCC
Confidence 6788999999999999996555667889999999999999985555556666666 45688999999
Q ss_pred EEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCCcccccccccccccccCCCCCCCC
Q 038318 68 FLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWNYTLCGPPRL 130 (220)
Q Consensus 68 ~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n~~l~~~~~~ 130 (220)
+|++++|.+++..+..+..+++|+.|++++|.+.+.. +.++.+++..| .+.|..|.
T Consensus 128 ~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~------~~l~~L~~~~n-~~~g~ip~ 183 (208)
T 2o6s_A 128 DLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC------PGIRYLSEWIN-KHSGVVRN 183 (208)
T ss_dssp EEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCT------TTTHHHHHHHH-HCTTTBBC
T ss_pred EEECCCCccceeCHHHhccCCCccEEEecCCCeecCC------CCHHHHHHHHH-hCCceeec
Confidence 9999999999777777899999999999999988644 46778888888 67776653
No 27
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.66 E-value=3.7e-16 Score=131.98 Aligned_cols=70 Identities=29% Similarity=0.306 Sum_probs=35.8
Q ss_pred hhhhcCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCC
Q 038318 57 VDCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 57 p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~ 126 (220)
|..|..+++|+.|++++|.+++..|..|..+++|+.|++++|++++..+.. ..+++++.+++++||..|.
T Consensus 235 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 235 PGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp GGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECS
T ss_pred cccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCC
Confidence 334444444444555555554444445555555555555555555333322 4455566666666655553
No 28
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.66 E-value=3.3e-16 Score=131.88 Aligned_cols=69 Identities=22% Similarity=0.205 Sum_probs=39.6
Q ss_pred hhhcCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCC
Q 038318 58 DCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 58 ~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~ 126 (220)
..|..+++|+.|++++|++++..+..|.++++|+.|++++|++++..+.. ..+++++.+++++||..|.
T Consensus 225 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 225 GSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp TTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECS
T ss_pred hhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCC
Confidence 34444445555555555555444555555666666666666666433333 4566677777777776664
No 29
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.66 E-value=7.8e-16 Score=118.06 Aligned_cols=116 Identities=26% Similarity=0.209 Sum_probs=92.8
Q ss_pred CceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCCEEeccCC
Q 038318 9 RTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLEFLDISNN 74 (220)
Q Consensus 9 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~~L~ls~N 74 (220)
+.+++++|+++ .+|..+. ++|+.|++++|.+++..+..+..+++| |..|..+++|++|++++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 57899999998 8888764 789999999999996666667766665 778888888888999888
Q ss_pred cccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCCCC
Q 038318 75 NLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCGPP 128 (220)
Q Consensus 75 ~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~~~ 128 (220)
.++...+..|..+++|+.|++++|++++..|.. ..+++|+.+++++| .+.+.+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~ 144 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDN-KLQTIA 144 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-CCSCCC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCC-cCCEEC
Confidence 888555556788888888999888888766655 67788888888888 555443
No 30
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.65 E-value=7e-16 Score=113.69 Aligned_cols=106 Identities=23% Similarity=0.244 Sum_probs=80.2
Q ss_pred CCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCccccCC
Q 038318 8 LRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFKGL 87 (220)
Q Consensus 8 L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l 87 (220)
.+.+++++|+++ .+|..+ .++|++|+|++|++++..|. .|..+++|++|++++|++++..+..|..+
T Consensus 11 ~~~l~~s~n~l~-~ip~~~--~~~l~~L~L~~N~i~~~~~~----------~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l 77 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGI--PTTTQVLYLYDNQITKLEPG----------VFDRLTQLTRLDLDNNQLTVLPAGVFDKL 77 (170)
T ss_dssp TTEEECTTSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTT----------TTTTCTTCSEEECCSSCCCCCCTTTTTTC
T ss_pred CCEEEeCCCCcC-ccCccC--CCCCcEEEcCCCcCCccChh----------hhcCcccCCEEECCCCCcCccChhhccCC
Confidence 567888888887 677666 37788888888888865555 35667788888888888886666667788
Q ss_pred CCCCeeeccCCcccccCCCC-cccccccccccccccCCCC
Q 038318 88 SRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 88 ~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~ 126 (220)
++|++|++++|++++..+.. ..+++|+.+++++|+..|.
T Consensus 78 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 78 TQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 88888888888888655543 6677888888888876664
No 31
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.65 E-value=2e-16 Score=137.96 Aligned_cols=124 Identities=18% Similarity=0.201 Sum_probs=78.8
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCC-CChhhhcCccC--------------hhhhcCCCCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGF-LPSNIEKLKVL--------------VDCFGSLTSL 66 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L--------------p~~~~~l~~L 66 (220)
|.++++|++|++++|.+++..|..+..+++|++|++++|.+++. +|..++.+++| |..+..+++|
T Consensus 420 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 499 (606)
T 3vq2_A 420 FLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRL 499 (606)
T ss_dssp TTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred hhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccC
Confidence 34555666666666666655556666666666666666666542 45555555544 5566677777
Q ss_pred CEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccc-cccccccccccCCCC
Q 038318 67 EFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLR-NILAQSFIWNYTLCG 126 (220)
Q Consensus 67 ~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~-~l~~l~~~~n~~l~~ 126 (220)
++|++++|++++..|..+.++++|+.|++++|+++ .+|.. ..++ +++.+++++||..|.
T Consensus 500 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~ 560 (606)
T 3vq2_A 500 QLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACI 560 (606)
T ss_dssp CEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCS
T ss_pred CEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccC
Confidence 77777777777666777777777777777777776 34443 4443 477777777776664
No 32
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.65 E-value=2e-16 Score=130.04 Aligned_cols=88 Identities=27% Similarity=0.326 Sum_probs=48.3
Q ss_pred CCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCcc
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKS 83 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~ 83 (220)
++++|++|+|++|++++..|..|..+++|++|+|++|++++..+..+. .+++|+.|++++|.+++..|..
T Consensus 62 ~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~----------~l~~L~~L~L~~N~i~~~~~~~ 131 (361)
T 2xot_A 62 RLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFS----------DLQALEVLLLYNNHIVVVDRNA 131 (361)
T ss_dssp CCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTT----------TCTTCCEEECCSSCCCEECTTT
T ss_pred cccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhC----------CCcCCCEEECCCCcccEECHHH
Confidence 566677777777777654455566677777777777776644343344 4444444444444444444444
Q ss_pred ccCCCCCCeeeccCCccc
Q 038318 84 FKGLSRLKQLNAAHSKLE 101 (220)
Q Consensus 84 ~~~l~~L~~l~l~~n~l~ 101 (220)
|.++++|+.|++++|+++
T Consensus 132 ~~~l~~L~~L~L~~N~l~ 149 (361)
T 2xot_A 132 FEDMAQLQKLYLSQNQIS 149 (361)
T ss_dssp TTTCTTCCEEECCSSCCC
T ss_pred hCCcccCCEEECCCCcCC
Confidence 444444444444444444
No 33
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.64 E-value=1.9e-16 Score=139.23 Aligned_cols=116 Identities=23% Similarity=0.308 Sum_probs=63.5
Q ss_pred CCCCCCceecCCCccCCccChhhhccccCCeeeccCCC-CCC-CCChhhhcC------ccC-------------hh--hh
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNS-LSG-FLPSNIEKL------KVL-------------VD--CF 60 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g-~~p~~~~~l------~~L-------------p~--~~ 60 (220)
++++|++|+|++|+++|.+|..|+++++|++|++++|. ++| .+|..++.+ ++| |. .+
T Consensus 247 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l 326 (636)
T 4eco_A 247 NLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSL 326 (636)
T ss_dssp GCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHH
T ss_pred ccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhh
Confidence 45555555555555555555555555555555555555 555 455554443 333 44 55
Q ss_pred cCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-ccccc-ccccccccc
Q 038318 61 GSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRN-ILAQSFIWN 121 (220)
Q Consensus 61 ~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~-l~~l~~~~n 121 (220)
+.+++|++|++++|.++|.+| .+..+++|+.|++++|+++ .+|.. ..+++ ++.+++++|
T Consensus 327 ~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N 387 (636)
T 4eco_A 327 QKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHN 387 (636)
T ss_dssp TTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSS
T ss_pred ccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCC
Confidence 555555555555555555555 5555555555555555555 44443 44555 666666666
No 34
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.64 E-value=6.7e-16 Score=123.79 Aligned_cols=117 Identities=24% Similarity=0.332 Sum_probs=82.1
Q ss_pred CCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCC-hhhhcCccC--------------hhhhcCCCCCCE
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLP-SNIEKLKVL--------------VDCFGSLTSLEF 68 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L--------------p~~~~~l~~L~~ 68 (220)
.+++|++|+|++|.++ .+|..+..+++|++|++++|.+++..+ ..+..+++| |..+..+++|++
T Consensus 76 ~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 154 (306)
T 2z66_A 76 GTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 154 (306)
T ss_dssp SCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCE
T ss_pred cccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCE
Confidence 4677777777777777 566667777777777777777764333 345555554 556777777777
Q ss_pred EeccCCcccc-cCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccc
Q 038318 69 LDISNNNLFG-KIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 69 L~ls~N~l~~-~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n 121 (220)
|++++|.+++ ..|..+..+++|++|++++|++++..|.. ..+++++.+++++|
T Consensus 155 L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N 209 (306)
T 2z66_A 155 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 209 (306)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred EECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCC
Confidence 7777777765 46677777777777777777777665554 56677777777777
No 35
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.63 E-value=8.1e-16 Score=134.13 Aligned_cols=118 Identities=24% Similarity=0.234 Sum_probs=92.3
Q ss_pred CCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCCEEecc
Q 038318 7 YLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLEFLDIS 72 (220)
Q Consensus 7 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~~L~ls 72 (220)
++++|||++|+|++..|.+|.++++|++|+|++|++++..|..|.++++| |..|.++++|++|+++
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 68889999999986556778889999999999998885555667766665 4568888888888888
Q ss_pred CCcccccCCccccCCCCCCeeeccCCccccc-CCCC-cccccccccccccccCCC
Q 038318 73 NNNLFGKIPKSFKGLSRLKQLNAAHSKLEEE-IPIE-RPLRNILAQSFIWNYTLC 125 (220)
Q Consensus 73 ~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~-~p~~-~~~~~l~~l~~~~n~~l~ 125 (220)
+|++++..+..|+++++|++|++++|++++. .|.. ..++.++.+++++| .+.
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N-~l~ 186 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN-KIQ 186 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSS-CCC
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCc-ccc
Confidence 8888876666788888888888888888753 3444 66778888888888 443
No 36
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.63 E-value=5.2e-16 Score=135.32 Aligned_cols=123 Identities=20% Similarity=0.215 Sum_probs=67.4
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCC---CChhhhcCccC--------------hhhhcCCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGF---LPSNIEKLKVL--------------VDCFGSLT 64 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~---~p~~~~~l~~L--------------p~~~~~l~ 64 (220)
|..+++|++|++++|.+++..|..+..+++|++|++++|.+++. .+..+..+++| |..+..++
T Consensus 421 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 500 (606)
T 3t6q_A 421 FQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLK 500 (606)
T ss_dssp TTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred hhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhcccc
Confidence 34455555555555555555555555555555555555555431 12334444333 45555556
Q ss_pred CCCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCC
Q 038318 65 SLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLC 125 (220)
Q Consensus 65 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~ 125 (220)
+|+.|++++|++++..|..+.+++.| .|++++|++++..|.. ..+++++.+++++||..|
T Consensus 501 ~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 561 (606)
T 3t6q_A 501 MMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDC 561 (606)
T ss_dssp TCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEEC
T ss_pred CCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccc
Confidence 66666666666665555556666666 6666666666544443 445566666666665555
No 37
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.63 E-value=1.8e-15 Score=116.05 Aligned_cols=118 Identities=19% Similarity=0.145 Sum_probs=97.4
Q ss_pred CCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCCh-hhhcCccC--------------hhhhcCCCCCCEEecc
Q 038318 8 LRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPS-NIEKLKVL--------------VDCFGSLTSLEFLDIS 72 (220)
Q Consensus 8 L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L--------------p~~~~~l~~L~~L~ls 72 (220)
-+.+++++|.++ .+|..+. ..++.|++++|.+++..|. .+..+++| |..|..+++|++|+++
T Consensus 13 ~~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 13 GTTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 358999999998 7887663 4578999999999966553 46666666 5689999999999999
Q ss_pred CCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCCCCC
Q 038318 73 NNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCGPPR 129 (220)
Q Consensus 73 ~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~~~~ 129 (220)
+|.+++..|..|..+++|++|++++|++++..|.. ..+++|+.+++++| .+.+..|
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~~ 146 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDN-QITTVAP 146 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTS-CCCCBCT
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCC-cCCEECH
Confidence 99999887888999999999999999999877766 77889999999999 6665443
No 38
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.63 E-value=1.7e-15 Score=112.02 Aligned_cols=105 Identities=19% Similarity=0.178 Sum_probs=78.2
Q ss_pred CceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCccccCCC
Q 038318 9 RTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFKGLS 88 (220)
Q Consensus 9 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~ 88 (220)
+.+++++|+++ .+|..+. ++|++|+|++|++++..|. .|..+++|+.|++++|++++..+..|.+++
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~----------~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~ 81 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPG----------VFDHLVNLQQLYFNSNKLTAIPTGVFDKLT 81 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTT----------TTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHH----------HhcCCcCCCEEECCCCCCCccChhHhCCcc
Confidence 56788888886 7777664 7788888888888865555 356677888888888888865555567888
Q ss_pred CCCeeeccCCcccccCCCC-cccccccccccccccCCCC
Q 038318 89 RLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 89 ~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~ 126 (220)
+|++|++++|++++..+.. ..+++|+.+++++|+..|.
T Consensus 82 ~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 82 QLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred hhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 8888888888888654443 6677888888888866554
No 39
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.63 E-value=7.1e-16 Score=121.96 Aligned_cols=104 Identities=17% Similarity=0.226 Sum_probs=70.6
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLE 67 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~ 67 (220)
|.++++|++|+|++|++++..+..|..+++|++|++++|.+++..|..+..+++| +..+..+++|+
T Consensus 48 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 127 (276)
T 2z62_A 48 FFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLK 127 (276)
T ss_dssp TTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCC
T ss_pred hccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCC
Confidence 5567777777777777775555567777777777777777775555556655554 33466677777
Q ss_pred EEeccCCccccc-CCccccCCCCCCeeeccCCcccccCC
Q 038318 68 FLDISNNNLFGK-IPKSFKGLSRLKQLNAAHSKLEEEIP 105 (220)
Q Consensus 68 ~L~ls~N~l~~~-~p~~~~~l~~L~~l~l~~n~l~~~~p 105 (220)
+|++++|.+++. +|..+..+++|++|++++|++++..+
T Consensus 128 ~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 128 ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp EEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred EEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 777777777652 46777777777777777777765443
No 40
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.63 E-value=7.8e-16 Score=134.24 Aligned_cols=114 Identities=22% Similarity=0.336 Sum_probs=85.1
Q ss_pred CCCCCCCceecCCCccC-CccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCC
Q 038318 3 GSLTYLRTPHLGSNNLT-SSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIP 81 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p 81 (220)
..++.|+.|+|++|++. +.+|..|..+++|++|+|++|++++..| ..|..+++|++|++++|++++..|
T Consensus 466 ~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~----------~~f~~l~~L~~L~Ls~N~l~~l~~ 535 (635)
T 4g8a_A 466 NGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP----------TAFNSLSSLQVLNMSHNNFFSLDT 535 (635)
T ss_dssp TTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECT----------TTTTTCTTCCEEECTTSCCCBCCC
T ss_pred ccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcCh----------HHHcCCCCCCEEECCCCcCCCCCh
Confidence 34455555555555432 2344555555556666666665554444 467889999999999999998888
Q ss_pred ccccCCCCCCeeeccCCcccccCCCC-ccc-ccccccccccccCCCC
Q 038318 82 KSFKGLSRLKQLNAAHSKLEEEIPIE-RPL-RNILAQSFIWNYTLCG 126 (220)
Q Consensus 82 ~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~-~~l~~l~~~~n~~l~~ 126 (220)
..|.++++|++|++++|++++..|.. ..+ ++++.+++++||+.|.
T Consensus 536 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 536 FPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp GGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred hHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 89999999999999999999887776 444 6899999999999985
No 41
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.63 E-value=1.8e-15 Score=120.76 Aligned_cols=117 Identities=25% Similarity=0.223 Sum_probs=63.9
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLE 67 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~ 67 (220)
|.++++|++|+|++|+++ .+|.. ..+++|++|++++|.++ .+|..+..+++| |..|..+++|+
T Consensus 51 ~~~l~~L~~L~L~~n~l~-~~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~ 127 (290)
T 1p9a_G 51 LMPYTRLTQLNLDRAELT-KLQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQ 127 (290)
T ss_dssp GTTCTTCCEEECTTSCCC-EEECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCC
T ss_pred hhcCCCCCEEECCCCccC-cccCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCC
Confidence 345555555555555555 23322 45556666666666665 555544444433 34555666666
Q ss_pred EEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccc
Q 038318 68 FLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 68 ~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n 121 (220)
+|++++|++++..+..|..+++|+.|++++|++++..+.. ..+++++.+++++|
T Consensus 128 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N 182 (290)
T 1p9a_G 128 ELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQEN 182 (290)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred EEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCC
Confidence 6666666666444445555666666666666665332222 34556666666666
No 42
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.63 E-value=2.3e-16 Score=138.73 Aligned_cols=128 Identities=25% Similarity=0.381 Sum_probs=112.6
Q ss_pred CCCCCCCCCceecCCCc-cCC-ccChhhhcc------ccCCeeeccCCCCCCCCCh--hhhcCccC--------------
Q 038318 1 MLGSLTYLRTPHLGSNN-LTS-SISLSLWNV------ECILYIDLSSNSLSGFLPS--NIEKLKVL-------------- 56 (220)
Q Consensus 1 ~l~~l~~L~~L~Ls~n~-l~g-~~p~~~~~l------~~L~~L~Ls~N~l~g~~p~--~~~~l~~L-------------- 56 (220)
+|+++++|++|+|++|+ ++| .+|..++.+ ++|++|++++|+++ .+|. .++.+++|
T Consensus 268 ~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~i 346 (636)
T 4eco_A 268 FLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKL 346 (636)
T ss_dssp TTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEEC
T ss_pred HHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccch
Confidence 36889999999999998 998 899999887 99999999999999 8998 89888877
Q ss_pred hhhhcCCCCCCEEeccCCcccccCCccccCCCC-CCeeeccCCcccccCCCC-cc--cccccccccccccCCCCCCCCCC
Q 038318 57 VDCFGSLTSLEFLDISNNNLFGKIPKSFKGLSR-LKQLNAAHSKLEEEIPIE-RP--LRNILAQSFIWNYTLCGPPRLQV 132 (220)
Q Consensus 57 p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~-L~~l~l~~n~l~~~~p~~-~~--~~~l~~l~~~~n~~l~~~~~~~~ 132 (220)
| .++.+++|+.|++++|.++ .+|..+.++++ |++|++++|+++ .+|.. .. +++++.+++++| .+.+..|...
T Consensus 347 p-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N-~l~~~~p~~l 422 (636)
T 4eco_A 347 P-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYN-EIGSVDGKNF 422 (636)
T ss_dssp C-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSS-CTTTTTTCSS
T ss_pred h-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCC-cCCCcchhhh
Confidence 7 7888899999999999999 89999999999 999999999999 67765 33 348999999999 7777665444
Q ss_pred C
Q 038318 133 P 133 (220)
Q Consensus 133 ~ 133 (220)
.
T Consensus 423 ~ 423 (636)
T 4eco_A 423 D 423 (636)
T ss_dssp C
T ss_pred c
Confidence 4
No 43
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.62 E-value=2e-15 Score=119.32 Aligned_cols=120 Identities=21% Similarity=0.179 Sum_probs=83.5
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC---------------hhhhcCCCCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL---------------VDCFGSLTSL 66 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L---------------p~~~~~l~~L 66 (220)
|.++++|++|+|++|++++..|..|..+++|++|++++|.+++..+..++.+++| |..+..+++|
T Consensus 72 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L 151 (276)
T 2z62_A 72 YQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNL 151 (276)
T ss_dssp TTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTC
T ss_pred ccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCC
Confidence 6678888888888888886666778888888888888888875555456665555 6678888888
Q ss_pred CEEeccCCcccccCCccccCCCCCC----eeeccCCcccccCCCCcccccccccccccc
Q 038318 67 EFLDISNNNLFGKIPKSFKGLSRLK----QLNAAHSKLEEEIPIERPLRNILAQSFIWN 121 (220)
Q Consensus 67 ~~L~ls~N~l~~~~p~~~~~l~~L~----~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n 121 (220)
++|++++|.+++..+..+..+.+|+ .+++++|++++..+......+++.+++++|
T Consensus 152 ~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n 210 (276)
T 2z62_A 152 EHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTN 210 (276)
T ss_dssp CEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSS
T ss_pred CEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCC
Confidence 8888888888876666665555554 566666666654433333335556666655
No 44
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.62 E-value=1e-15 Score=132.29 Aligned_cols=123 Identities=24% Similarity=0.262 Sum_probs=71.9
Q ss_pred CCCCCCCceecCCCccCCccC-hhhhccccCCeeeccCCCCCCCCChhhhcCccC---------------hhhhcCCCCC
Q 038318 3 GSLTYLRTPHLGSNNLTSSIS-LSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL---------------VDCFGSLTSL 66 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L---------------p~~~~~l~~L 66 (220)
..+++|++|++++|.+++..| ..+..+++|++|++++|.+++..|..+..+++| |..+..+++|
T Consensus 393 ~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L 472 (570)
T 2z63_A 393 LGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNL 472 (570)
T ss_dssp ETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC
T ss_pred cccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCC
Confidence 345555555555555554443 345556666666666666655555555444443 4455566666
Q ss_pred CEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCC
Q 038318 67 EFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLC 125 (220)
Q Consensus 67 ~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~ 125 (220)
+.|++++|.+++..|..+..+++|++|++++|++++..|.. ..+++++.+++++|+..|
T Consensus 473 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 532 (570)
T 2z63_A 473 TFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 532 (570)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccC
Confidence 66666666666666666666666666666666666554443 455666666666665444
No 45
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.61 E-value=9.9e-16 Score=133.56 Aligned_cols=120 Identities=23% Similarity=0.246 Sum_probs=86.2
Q ss_pred CCCCCCCCceecCCCccCCccC-hhhhccccCCeeeccCCCCCCCCChhhhcCccC---------------hhhhcCCCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSIS-LSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL---------------VDCFGSLTS 65 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L---------------p~~~~~l~~ 65 (220)
|..+++|+.|++++|++++..| ..+..+++|++|++++|.+++..|..++.+++| |..++.+++
T Consensus 395 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 474 (606)
T 3vq2_A 395 FMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTN 474 (606)
T ss_dssp CTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT
T ss_pred ccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCC
Confidence 5567777777777777776666 567777777777777777777677766666555 455667777
Q ss_pred CCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccc
Q 038318 66 LEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 66 L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n 121 (220)
|++|++++|.+++..|..+..+++|+.|++++|++++..|.. ..+++++.+++++|
T Consensus 475 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 531 (606)
T 3vq2_A 475 LTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFN 531 (606)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTS
T ss_pred CCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCC
Confidence 777777777777777777777777777777777777665654 56667777777777
No 46
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.60 E-value=2.1e-15 Score=110.66 Aligned_cols=106 Identities=20% Similarity=0.213 Sum_probs=75.3
Q ss_pred CCCCCCceecCCCccC-CccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCc
Q 038318 4 SLTYLRTPHLGSNNLT-SSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPK 82 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~ 82 (220)
..++|+.|++++|+++ +.+|..+..+++|++|++++|.+++. .. +..+++|++|++++|.+++.+|.
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~----------~~~l~~L~~L~Ls~N~l~~~~~~ 89 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SN----------LPKLPKLKKLELSENRIFGGLDM 89 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SS----------CCCCSSCCEEEEESCCCCSCCCH
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hh----------hccCCCCCEEECcCCcCchHHHH
Confidence 4578999999999998 78898889999999999999998854 32 45566666677776666655666
Q ss_pred cccCCCCCCeeeccCCcccccC--CCCcccccccccccccc
Q 038318 83 SFKGLSRLKQLNAAHSKLEEEI--PIERPLRNILAQSFIWN 121 (220)
Q Consensus 83 ~~~~l~~L~~l~l~~n~l~~~~--p~~~~~~~l~~l~~~~n 121 (220)
.+..+++|++|++++|++++.. +....+++++.+++++|
T Consensus 90 ~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N 130 (168)
T 2ell_A 90 LAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNC 130 (168)
T ss_dssp HHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSS
T ss_pred HHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCC
Confidence 5556666666677666666422 11145566666666666
No 47
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=1.1e-15 Score=109.92 Aligned_cols=110 Identities=14% Similarity=0.165 Sum_probs=93.6
Q ss_pred CCCCCCceecCCCccC-CccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCc
Q 038318 4 SLTYLRTPHLGSNNLT-SSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPK 82 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~ 82 (220)
..++|+.|++++|+++ +.+|..+..+++|++|++++|.+++. . .++.+++|++|++++|.+++.+|.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~----------~~~~l~~L~~L~Ls~n~i~~~~~~ 82 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--A----------NLPKLNKLKKLELSDNRVSGGLEV 82 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--T----------TCCCCTTCCEEECCSSCCCSCTHH
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--h----------hhhcCCCCCEEECCCCcccchHHH
Confidence 4578999999999998 89999999999999999999999854 3 367788999999999999977888
Q ss_pred cccCCCCCCeeeccCCccccc-CCCC-cccccccccccccccCCCC
Q 038318 83 SFKGLSRLKQLNAAHSKLEEE-IPIE-RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 83 ~~~~l~~L~~l~l~~n~l~~~-~p~~-~~~~~l~~l~~~~n~~l~~ 126 (220)
.+..+++|++|++++|++++. .+.. ..+++++.+++++| .+.+
T Consensus 83 ~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N-~l~~ 127 (149)
T 2je0_A 83 LAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC-EVTN 127 (149)
T ss_dssp HHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTC-GGGG
T ss_pred HhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCC-cccc
Confidence 888899999999999999863 2233 77888999999999 5554
No 48
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.60 E-value=2.5e-15 Score=126.63 Aligned_cols=124 Identities=23% Similarity=0.231 Sum_probs=106.4
Q ss_pred CCCCCCceecCCCccCCccChhhhcc---------------------------------------ccCCeeeccCCCCCC
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWNV---------------------------------------ECILYIDLSSNSLSG 44 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~l---------------------------------------~~L~~L~Ls~N~l~g 44 (220)
.+++|++|++++|++++.+|..+..+ ++|+.|++++|.+++
T Consensus 210 ~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 289 (455)
T 3v47_A 210 KNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFA 289 (455)
T ss_dssp TTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCE
T ss_pred ccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccc
Confidence 55789999999999998887766443 579999999999998
Q ss_pred CCChhhhcCccC--------------hhhhcCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cc
Q 038318 45 FLPSNIEKLKVL--------------VDCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RP 109 (220)
Q Consensus 45 ~~p~~~~~l~~L--------------p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~ 109 (220)
..|..++.+++| |..+..+++|++|++++|.+++..|..+..+++|++|++++|++++..|.. ..
T Consensus 290 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 369 (455)
T 3v47_A 290 LLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLG 369 (455)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTT
T ss_pred cchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccc
Confidence 888888887777 778999999999999999999888889999999999999999999877766 77
Q ss_pred cccccccccccccCCCCCC
Q 038318 110 LRNILAQSFIWNYTLCGPP 128 (220)
Q Consensus 110 ~~~l~~l~~~~n~~l~~~~ 128 (220)
+++|+.+++++| .+.+.+
T Consensus 370 l~~L~~L~L~~N-~l~~~~ 387 (455)
T 3v47_A 370 LPNLKELALDTN-QLKSVP 387 (455)
T ss_dssp CTTCCEEECCSS-CCSCCC
T ss_pred cccccEEECCCC-ccccCC
Confidence 899999999999 565543
No 49
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.60 E-value=2.3e-15 Score=127.73 Aligned_cols=100 Identities=24% Similarity=0.260 Sum_probs=53.4
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLE 67 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~ 67 (220)
|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..+..+++| |..|..+++|+
T Consensus 52 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 131 (477)
T 2id5_A 52 FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLK 131 (477)
T ss_dssp TTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCC
Confidence 4556666666666666665556666666666666666666653222233433333 34444555555
Q ss_pred EEeccCCcccccCCccccCCCCCCeeeccCCccc
Q 038318 68 FLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLE 101 (220)
Q Consensus 68 ~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~ 101 (220)
+|++++|.+++..|..|.++++|+.|++++|+++
T Consensus 132 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 165 (477)
T 2id5_A 132 SLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT 165 (477)
T ss_dssp EEEECCTTCCEECTTSSTTCTTCCEEEEESCCCS
T ss_pred EEECCCCccceeChhhccCCCCCCEEECCCCcCc
Confidence 5555555555444444555555555555555544
No 50
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.59 E-value=1.4e-15 Score=109.43 Aligned_cols=106 Identities=20% Similarity=0.128 Sum_probs=89.6
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCccccc-C
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGK-I 80 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~-~ 80 (220)
+..+++|++|++++|.+++. ..+..+++|++|++++|.+++.+|. .+..+++|++|++++|.+++. .
T Consensus 38 ~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~----------~~~~l~~L~~L~ls~N~i~~~~~ 105 (149)
T 2je0_A 38 TDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEV----------LAEKCPNLTHLNLSGNKIKDLST 105 (149)
T ss_dssp CTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHH----------HHHHCTTCCEEECTTSCCCSHHH
T ss_pred HhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHH----------HhhhCCCCCEEECCCCcCCChHH
Confidence 57889999999999999955 7799999999999999999976765 455688999999999999863 3
Q ss_pred CccccCCCCCCeeeccCCcccccCC---CC-cccccccccccc
Q 038318 81 PKSFKGLSRLKQLNAAHSKLEEEIP---IE-RPLRNILAQSFI 119 (220)
Q Consensus 81 p~~~~~l~~L~~l~l~~n~l~~~~p---~~-~~~~~l~~l~~~ 119 (220)
+..+..+++|++|++++|++++..+ .. ..+++++.++++
T Consensus 106 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 106 IEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp HGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred HHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 4789999999999999999997544 12 667788887765
No 51
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.59 E-value=2.5e-15 Score=132.76 Aligned_cols=126 Identities=23% Similarity=0.246 Sum_probs=87.6
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCC--------hhhhcCccC-------------h-hh
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLP--------SNIEKLKVL-------------V-DC 59 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p--------~~~~~l~~L-------------p-~~ 59 (220)
|.++++|++|+|++|++++..|..|..+++|++|++++|.+++..+ ..+..+++| | ..
T Consensus 476 ~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~ 555 (680)
T 1ziw_A 476 FQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEV 555 (680)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred cccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHH
Confidence 4566777777777777776556667777777777777777764211 113444443 3 45
Q ss_pred hcCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-c-ccccccccccccccCCCCC
Q 038318 60 FGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-R-PLRNILAQSFIWNYTLCGP 127 (220)
Q Consensus 60 ~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~-~~~~l~~l~~~~n~~l~~~ 127 (220)
|..+++|+.|++++|++++..+..|.++++|+.|++++|++++..|.. . .+++++.+++++||..|..
T Consensus 556 ~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c 625 (680)
T 1ziw_A 556 FKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTC 625 (680)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCC
T ss_pred cccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCC
Confidence 777888888888888888655566777888888888888887654443 2 5778888888888888853
No 52
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.59 E-value=2.6e-15 Score=113.09 Aligned_cols=116 Identities=13% Similarity=0.136 Sum_probs=66.8
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLE 67 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~ 67 (220)
+..+++|++|++++|.++ . ++.+..+++|++|++++|.+++..|..++.+++| |..+..+++|+
T Consensus 62 l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~ 139 (197)
T 4ezg_A 62 IEYAHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVN 139 (197)
T ss_dssp GGGCTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCC
T ss_pred HhcCCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCC
Confidence 456778888888888665 3 3467778888888888888876566654443332 33445555555
Q ss_pred EEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCCcccccccccccccc
Q 038318 68 FLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWN 121 (220)
Q Consensus 68 ~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n 121 (220)
+|++++|.+.+.+| .+..+++|+.|++++|++++ ++....+++++.+++++|
T Consensus 140 ~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 140 SIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YRGIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CTTGGGCSSCCEEEECBC
T ss_pred EEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hHHhccCCCCCEEEeeCc
Confidence 55555554222333 35555555555555555553 222244455555555555
No 53
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.58 E-value=7.7e-15 Score=113.14 Aligned_cols=104 Identities=24% Similarity=0.226 Sum_probs=89.0
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC-------------hhhhcCCCCCCE
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL-------------VDCFGSLTSLEF 68 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L-------------p~~~~~l~~L~~ 68 (220)
|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++| |..+..+++|++
T Consensus 60 ~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~ 139 (229)
T 3e6j_A 60 FDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTH 139 (229)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSE
T ss_pred hhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCE
Confidence 6788999999999999985555667899999999999999996555556766666 888999999999
Q ss_pred EeccCCcccccCCccccCCCCCCeeeccCCcccccCC
Q 038318 69 LDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIP 105 (220)
Q Consensus 69 L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p 105 (220)
|++++|++++..+..|..+++|+.|++++|.+.+..+
T Consensus 140 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 140 LALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred EECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 9999999997767789999999999999999986554
No 54
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.58 E-value=2.2e-15 Score=136.16 Aligned_cols=115 Identities=18% Similarity=0.287 Sum_probs=65.4
Q ss_pred CCCCCCceecCCCccCCccChhhhccccCCeeeccCCC-CCC-CCChhhhcCc-------cC-------------hh--h
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNS-LSG-FLPSNIEKLK-------VL-------------VD--C 59 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g-~~p~~~~~l~-------~L-------------p~--~ 59 (220)
++++|++|+|++|++.+.+|..|+++++|+.|++++|+ ++| .+|..++.++ +| |. .
T Consensus 489 ~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~ 568 (876)
T 4ecn_A 489 NLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASAS 568 (876)
T ss_dssp GCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHH
T ss_pred cCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhh
Confidence 55556666666666555666556666666666666665 555 5555554433 22 44 5
Q ss_pred hcCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-ccccc-ccccccccc
Q 038318 60 FGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRN-ILAQSFIWN 121 (220)
Q Consensus 60 ~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~-l~~l~~~~n 121 (220)
++.+++|+.|++++|.++ .+| .|+.+++|+.|++++|+++ .+|.. ..+++ |+.+++++|
T Consensus 569 l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N 629 (876)
T 4ecn_A 569 LQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHN 629 (876)
T ss_dssp HTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSS
T ss_pred hhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCC
Confidence 555556666666666555 555 5555556666666666655 44443 44555 666666666
No 55
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.58 E-value=1.8e-15 Score=129.03 Aligned_cols=122 Identities=20% Similarity=0.149 Sum_probs=98.5
Q ss_pred CCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhh-cCccC------------hhhhcCCCCCCEEe
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIE-KLKVL------------VDCFGSLTSLEFLD 70 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L------------p~~~~~l~~L~~L~ 70 (220)
.+++|+.|+|++|.+++..|..++.+++|++|+|++|.+++..|..+. .+++| ......+++|+.|+
T Consensus 118 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~ 197 (487)
T 3oja_A 118 RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLD 197 (487)
T ss_dssp CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEE
T ss_pred ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEE
Confidence 357788888888888888888888899999999999999987777765 55555 22244588999999
Q ss_pred ccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCCC
Q 038318 71 ISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCGP 127 (220)
Q Consensus 71 ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~~ 127 (220)
+++|.+++. |..+..+++|+.|++++|++++ +|.. ..++++..+++++|+..|+.
T Consensus 198 Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~ 253 (487)
T 3oja_A 198 LSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGT 253 (487)
T ss_dssp CCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHH
T ss_pred CCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcc
Confidence 999999964 4458899999999999999996 5554 67788999999999877653
No 56
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.58 E-value=1.3e-15 Score=137.58 Aligned_cols=123 Identities=22% Similarity=0.335 Sum_probs=108.8
Q ss_pred CCCCCCCCceecCCCc-cCC-ccChhhhccc-------cCCeeeccCCCCCCCCCh--hhhcCccC-------------h
Q 038318 2 LGSLTYLRTPHLGSNN-LTS-SISLSLWNVE-------CILYIDLSSNSLSGFLPS--NIEKLKVL-------------V 57 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~-l~g-~~p~~~~~l~-------~L~~L~Ls~N~l~g~~p~--~~~~l~~L-------------p 57 (220)
|++|++|++|+|++|+ ++| .+|..++.++ +|+.|++++|.++ .+|. .++.+++| |
T Consensus 511 l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~~lp 589 (876)
T 4ecn_A 511 LYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVRHLE 589 (876)
T ss_dssp GGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCCBCC
T ss_pred HhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcccch
Confidence 6789999999999998 998 8999888887 9999999999999 9998 88888877 7
Q ss_pred hhhcCCCCCCEEeccCCcccccCCccccCCCC-CCeeeccCCcccccCCCC-ccc--ccccccccccccCCCCCCC
Q 038318 58 DCFGSLTSLEFLDISNNNLFGKIPKSFKGLSR-LKQLNAAHSKLEEEIPIE-RPL--RNILAQSFIWNYTLCGPPR 129 (220)
Q Consensus 58 ~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~-L~~l~l~~n~l~~~~p~~-~~~--~~l~~l~~~~n~~l~~~~~ 129 (220)
.++.+++|+.|++++|.++ .+|..+.++++ |+.|++++|+++ .+|.. ... ++|+.+++++| .+++.+|
T Consensus 590 -~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N-~l~g~ip 661 (876)
T 4ecn_A 590 -AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYN-KIGSEGR 661 (876)
T ss_dssp -CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSS-CTTTTSS
T ss_pred -hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCC-cCCCccc
Confidence 8889999999999999999 89999999999 999999999999 67765 333 34999999999 7776543
No 57
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.58 E-value=1.3e-14 Score=122.17 Aligned_cols=55 Identities=16% Similarity=0.135 Sum_probs=32.9
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL 56 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 56 (220)
|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..+..+++|
T Consensus 84 ~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 138 (440)
T 3zyj_A 84 FKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKL 138 (440)
T ss_dssp TSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSC
T ss_pred hhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccC
Confidence 4566666666666666665555566666666666666666663333344444444
No 58
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.58 E-value=5.8e-15 Score=128.70 Aligned_cols=125 Identities=20% Similarity=0.214 Sum_probs=94.0
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChh-hhcCccC--------------hhhhcCCCCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSN-IEKLKVL--------------VDCFGSLTSL 66 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L--------------p~~~~~l~~L 66 (220)
+..+++|++|++++|++++..|..|..+++|+.|++++|.+++..|.. +..+++| |..+..+++|
T Consensus 372 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 451 (606)
T 3t6q_A 372 LRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPAL 451 (606)
T ss_dssp TTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTC
T ss_pred cccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCC
Confidence 567788888888888888777778888888888888888887665543 5555555 6667788888
Q ss_pred CEEeccCCccccc---CCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCCC
Q 038318 67 EFLDISNNNLFGK---IPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCGP 127 (220)
Q Consensus 67 ~~L~ls~N~l~~~---~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~~ 127 (220)
++|++++|.+++. .+..+..+++|+.|++++|++++..|.. ..+++++.+++++| .+.+.
T Consensus 452 ~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~~ 515 (606)
T 3t6q_A 452 QHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHN-RLTSS 515 (606)
T ss_dssp CEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS-CCCGG
T ss_pred CEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCC-ccCcC
Confidence 8888888888762 3356778888888888888888776665 67778888888888 55543
No 59
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.58 E-value=5.9e-15 Score=121.24 Aligned_cols=110 Identities=19% Similarity=0.145 Sum_probs=94.2
Q ss_pred CCCCceecCCCccCCccChhhh-ccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCccc
Q 038318 6 TYLRTPHLGSNNLTSSISLSLW-NVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSF 84 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~~ 84 (220)
+.++.|+|++|++++..+..+. .+++|++|+|++|++++..|. .|..+++|++|++++|++++..+..|
T Consensus 39 ~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~----------~~~~l~~L~~L~Ls~N~l~~~~~~~~ 108 (361)
T 2xot_A 39 SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSE----------AFVPVPNLRYLDLSSNHLHTLDEFLF 108 (361)
T ss_dssp TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTT----------TTTTCTTCCEEECCSSCCCEECTTTT
T ss_pred CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChh----------hccCCCCCCEEECCCCcCCcCCHHHh
Confidence 3578999999999966666676 899999999999999854444 46788999999999999998778889
Q ss_pred cCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCC
Q 038318 85 KGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 85 ~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~ 126 (220)
..+++|+.|++++|++++..|.. ..+++|+.+++++| .+.+
T Consensus 109 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N-~l~~ 150 (361)
T 2xot_A 109 SDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQN-QISR 150 (361)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS-CCCS
T ss_pred CCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCC-cCCe
Confidence 99999999999999999876765 78899999999999 5554
No 60
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.57 E-value=6.8e-15 Score=131.11 Aligned_cols=102 Identities=23% Similarity=0.296 Sum_probs=69.4
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC-------------hhhhcCCCCCCE
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL-------------VDCFGSLTSLEF 68 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L-------------p~~~~~l~~L~~ 68 (220)
|..++.|+.|+|++|.++ .+|..+..+++|++|+|++|.++ .+|..++.|++| |..|+.+++|++
T Consensus 220 ~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~ 297 (727)
T 4b8c_D 220 KYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKY 297 (727)
T ss_dssp --CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSE
T ss_pred hccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCE
Confidence 567888999999999998 88888889999999999999998 888866555443 444555555555
Q ss_pred EeccCCcccccCCccccCCCCCCeeeccCCcccccCCC
Q 038318 69 LDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPI 106 (220)
Q Consensus 69 L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~ 106 (220)
|+|++|.++ .+|..|+.+++|+.|+|++|++++.+|.
T Consensus 298 L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~ 334 (727)
T 4b8c_D 298 FYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLK 334 (727)
T ss_dssp EECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHH
T ss_pred EECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChH
Confidence 555555554 4455555555555555555555554443
No 61
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.57 E-value=2.1e-15 Score=123.31 Aligned_cols=109 Identities=23% Similarity=0.189 Sum_probs=54.0
Q ss_pred CCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCC-
Q 038318 3 GSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIP- 81 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p- 81 (220)
.++++|++|+|++|++++..|..|.++++|++|++++|+++ .+|. ..++.+++|++|++++|++++..+
T Consensus 73 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~---------~~~~~l~~L~~L~L~~n~l~~l~~~ 142 (353)
T 2z80_A 73 QRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLS-NLSS---------SWFKPLSSLTFLNLLGNPYKTLGET 142 (353)
T ss_dssp TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS-SCCH---------HHHTTCTTCSEEECTTCCCSSSCSS
T ss_pred ccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCC-cCCH---------hHhCCCccCCEEECCCCCCcccCch
Confidence 34444444444444444333444444444444444444444 2222 235556666666666666653222
Q ss_pred ccccCCCCCCeeeccCCc-ccccCCCC-cccccccccccccc
Q 038318 82 KSFKGLSRLKQLNAAHSK-LEEEIPIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 82 ~~~~~l~~L~~l~l~~n~-l~~~~p~~-~~~~~l~~l~~~~n 121 (220)
..+..+++|++|++++|+ +.+..+.. ..+++++.+++++|
T Consensus 143 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n 184 (353)
T 2z80_A 143 SLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDAS 184 (353)
T ss_dssp CSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred hhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCC
Confidence 245556666666666653 44333332 44555555555555
No 62
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.57 E-value=7.9e-15 Score=125.68 Aligned_cols=116 Identities=20% Similarity=0.188 Sum_probs=67.1
Q ss_pred CCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCC--CCChhhhcCccC--------------hh-hhcCCCC
Q 038318 3 GSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSG--FLPSNIEKLKVL--------------VD-CFGSLTS 65 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L--------------p~-~~~~l~~ 65 (220)
..+++|++|++++|++++.+|..+..+++|++|++++|++++ .+|..++.+++| |. .+..+++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 456667777777777766666666666667777777776664 344445554444 22 2445556
Q ss_pred CCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccc
Q 038318 66 LEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 66 L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n 121 (220)
|++|++++|.+++..|..+. ++|+.|++++|+++ .+|.. ..+++++.+++++|
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N 454 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASN 454 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSS
T ss_pred CCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCC
Confidence 66666666665555544433 45556666666555 34443 45555555555555
No 63
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.57 E-value=6.8e-15 Score=133.18 Aligned_cols=124 Identities=25% Similarity=0.286 Sum_probs=66.9
Q ss_pred CCCCCCCCceecCCCccCCcc-ChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhh--hcCCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSI-SLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDC--FGSLT 64 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~--~~~l~ 64 (220)
|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..++++++| |.. ++.++
T Consensus 44 ~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~ 123 (844)
T 3j0a_A 44 FPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLK 123 (844)
T ss_dssp CSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCS
T ss_pred CcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccC
Confidence 445555555555555444444 4455556666666666666655555555544444 222 55566
Q ss_pred CCCEEeccCCcccccCC-ccccCCCCCCeeeccCCcccccCCCC-ccc--ccccccccccccCCCC
Q 038318 65 SLEFLDISNNNLFGKIP-KSFKGLSRLKQLNAAHSKLEEEIPIE-RPL--RNILAQSFIWNYTLCG 126 (220)
Q Consensus 65 ~L~~L~ls~N~l~~~~p-~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~--~~l~~l~~~~n~~l~~ 126 (220)
+|++|++++|.+++..+ ..|+++++|++|++++|++++..+.. ..+ ++++.+++++| .+.+
T Consensus 124 ~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n-~l~~ 188 (844)
T 3j0a_A 124 ALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAAN-SLYS 188 (844)
T ss_dssp SCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCS-BSCC
T ss_pred CCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCC-cccc
Confidence 66666666666654433 34566666666666666665544443 222 45555566555 3444
No 64
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.57 E-value=5.9e-15 Score=127.14 Aligned_cols=120 Identities=19% Similarity=0.205 Sum_probs=89.2
Q ss_pred CCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCCEEec
Q 038318 6 TYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLEFLDI 71 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~~L~l 71 (220)
++|++|+|++|++++..|..|.++++|++|++++|.+++..|..++.+++| |..++.+++|++|++
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 467788888888876667777788888888888888876666666666655 455888888888888
Q ss_pred cCCcccc-cCCccccCCCCCCeeeccCCcccccCCC-C-cccccccccccccccCCCC
Q 038318 72 SNNNLFG-KIPKSFKGLSRLKQLNAAHSKLEEEIPI-E-RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 72 s~N~l~~-~~p~~~~~l~~L~~l~l~~n~l~~~~p~-~-~~~~~l~~l~~~~n~~l~~ 126 (220)
++|.+++ ..|..+.++++|++|++++|++.+.+|. . ..+++++.+++++| .+.+
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n-~l~~ 162 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKAL-SLRN 162 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET-TCCE
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCC-cccc
Confidence 8888875 3567788888888888888885445553 2 66778888888887 5554
No 65
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.57 E-value=1.1e-14 Score=122.92 Aligned_cols=54 Identities=19% Similarity=0.170 Sum_probs=29.2
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCcc
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKV 55 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 55 (220)
|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..+..+..+++
T Consensus 95 ~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 148 (452)
T 3zyi_A 95 FRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSK 148 (452)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTT
T ss_pred cCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCC
Confidence 455566666666666666555555555666666666666655333333443333
No 66
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.57 E-value=6e-15 Score=127.51 Aligned_cols=110 Identities=20% Similarity=0.195 Sum_probs=52.7
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIP 81 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p 81 (220)
|.++++|++|+|++|++++..|..|.++++|++|++++|.+++..|..+ +.+++|++|++++|.+++..+
T Consensus 48 ~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~----------~~l~~L~~L~L~~n~l~~l~~ 117 (570)
T 2z63_A 48 FFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAF----------SGLSSLQKLVAVETNLASLEN 117 (570)
T ss_dssp TTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTT----------TTCTTCCEEECTTSCCCCSTT
T ss_pred hhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhh----------cCccccccccccccccccCCC
Confidence 4455555555555555554444445555555555555555554334444 444444444444444443322
Q ss_pred ccccCCCCCCeeeccCCcccc-cCCCC-cccccccccccccc
Q 038318 82 KSFKGLSRLKQLNAAHSKLEE-EIPIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 82 ~~~~~l~~L~~l~l~~n~l~~-~~p~~-~~~~~l~~l~~~~n 121 (220)
..++++++|++|++++|.+++ .+|.. ..+++|+.+++++|
T Consensus 118 ~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n 159 (570)
T 2z63_A 118 FPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 159 (570)
T ss_dssp CSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTS
T ss_pred ccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCC
Confidence 234444444444444444443 12332 33444444444444
No 67
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.56 E-value=1.5e-14 Score=127.83 Aligned_cols=116 Identities=21% Similarity=0.191 Sum_probs=79.3
Q ss_pred CCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC-------------h-hhhcCCCCCCEEec
Q 038318 6 TYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL-------------V-DCFGSLTSLEFLDI 71 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L-------------p-~~~~~l~~L~~L~l 71 (220)
+++++|+|++|++++..|..|.++++|++|++++|.+++..|..++++++| | ..|+.+++|++|++
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 356777777777775555567777777777777777776666666665555 3 35677777777777
Q ss_pred cCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccc
Q 038318 72 SNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 72 s~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n 121 (220)
++|.+++..|..|+++++|++|++++|++++..|.. ..+++|+.+++++|
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 155 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNN 155 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSS
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCC
Confidence 777777655666777777777777777777655554 55666777777666
No 68
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.56 E-value=4.3e-15 Score=119.65 Aligned_cols=97 Identities=18% Similarity=0.203 Sum_probs=48.4
Q ss_pred CCCCCCceecCCCccCCccChhh--hccccCCeeeccCCCCCCCCChhhhcC-----ccC--------------hhhhcC
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSL--WNVECILYIDLSSNSLSGFLPSNIEKL-----KVL--------------VDCFGS 62 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~--~~l~~L~~L~Ls~N~l~g~~p~~~~~l-----~~L--------------p~~~~~ 62 (220)
++++|++|+|++|++++.+|..+ ..+++|++|++++|++++. |..++.+ ++| |..++.
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 34555555555555555555544 4555555555555555533 4444433 233 344555
Q ss_pred CCCCCEEeccCCccccc--CCccc--cCCCCCCeeeccCCccc
Q 038318 63 LTSLEFLDISNNNLFGK--IPKSF--KGLSRLKQLNAAHSKLE 101 (220)
Q Consensus 63 l~~L~~L~ls~N~l~~~--~p~~~--~~l~~L~~l~l~~n~l~ 101 (220)
+++|++|++++|++++. .|..+ ..+++|++|++++|+++
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 214 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGME 214 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCC
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCc
Confidence 55555555555555433 12222 44455555555555554
No 69
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.56 E-value=6.5e-15 Score=124.98 Aligned_cols=121 Identities=22% Similarity=0.180 Sum_probs=89.0
Q ss_pred CCCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCC
Q 038318 1 MLGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSL 66 (220)
Q Consensus 1 ~l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L 66 (220)
+|.++++|++|+|++|++++..+..|.++++|++|++++|.+++..|..+..+++| |..|..+++|
T Consensus 75 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 154 (477)
T 2id5_A 75 AFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSL 154 (477)
T ss_dssp TTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTC
T ss_pred hhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCC
Confidence 36788888999999988885545567888888888888888887777777777666 5677788888
Q ss_pred CEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccc
Q 038318 67 EFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 67 ~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n 121 (220)
+.|++++|.+++..+..+.++++|+.|++++|++.+..+.. ..+++++.+++++|
T Consensus 155 ~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~ 210 (477)
T 2id5_A 155 EQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHW 210 (477)
T ss_dssp CEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECC
T ss_pred CEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCC
Confidence 88888888887655556777777778877777777654433 44555555555554
No 70
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.56 E-value=3e-15 Score=129.01 Aligned_cols=107 Identities=26% Similarity=0.315 Sum_probs=88.0
Q ss_pred CCCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC---------------hhhhcCCCC
Q 038318 1 MLGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL---------------VDCFGSLTS 65 (220)
Q Consensus 1 ~l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L---------------p~~~~~l~~ 65 (220)
+|.++++|++|+|++|++++..|..|..+++|++|++++|.+++..|..++.+++| |..++.+++
T Consensus 45 ~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~ 124 (549)
T 2z81_A 45 DLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTN 124 (549)
T ss_dssp TTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTT
T ss_pred hhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCC
Confidence 36788899999999999987777888999999999999999986666668777766 567888899
Q ss_pred CCEEeccCCcccccCC-ccccCCCCCCeeeccCCcccccCCCC
Q 038318 66 LEFLDISNNNLFGKIP-KSFKGLSRLKQLNAAHSKLEEEIPIE 107 (220)
Q Consensus 66 L~~L~ls~N~l~~~~p-~~~~~l~~L~~l~l~~n~l~~~~p~~ 107 (220)
|++|++++|.+.+.+| ..+.++++|++|++++|++++..|..
T Consensus 125 L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 167 (549)
T 2z81_A 125 LQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQS 167 (549)
T ss_dssp CCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTT
T ss_pred ccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhh
Confidence 9999999998544554 57888999999999999998877655
No 71
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.56 E-value=1.5e-14 Score=106.48 Aligned_cols=91 Identities=22% Similarity=0.230 Sum_probs=79.9
Q ss_pred CCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCccc
Q 038318 5 LTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSF 84 (220)
Q Consensus 5 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~~ 84 (220)
.++|++|+|++|++++..|..|..+++|++|+|++|++++ +|.. .|..+++|++|++++|++++..+..|
T Consensus 29 ~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~---------~f~~l~~L~~L~L~~N~l~~~~~~~~ 98 (170)
T 3g39_A 29 PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTV-LPAG---------VFDKLTQLTQLSLNDNQLKSIPRGAF 98 (170)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC-CCTT---------TTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCc-cChh---------hccCCCCCCEEECCCCccCEeCHHHh
Confidence 3679999999999998889999999999999999999994 4542 36788999999999999997777789
Q ss_pred cCCCCCCeeeccCCcccccCC
Q 038318 85 KGLSRLKQLNAAHSKLEEEIP 105 (220)
Q Consensus 85 ~~l~~L~~l~l~~n~l~~~~p 105 (220)
..+++|+.|++++|.++...+
T Consensus 99 ~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 99 DNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp TTCTTCCEEECCSSCBCTTBG
T ss_pred cCCCCCCEEEeCCCCCCCCch
Confidence 999999999999999986543
No 72
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.55 E-value=7.6e-15 Score=128.09 Aligned_cols=101 Identities=18% Similarity=0.224 Sum_probs=79.3
Q ss_pred CCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC-------------h-hhhcCCCCCCE
Q 038318 3 GSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL-------------V-DCFGSLTSLEF 68 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L-------------p-~~~~~l~~L~~ 68 (220)
.++++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..++.+++| | ..|+.+++|++
T Consensus 72 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~ 151 (597)
T 3oja_B 72 DSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTT 151 (597)
T ss_dssp HHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCE
Confidence 456788888888888886666788888888888888888887666666666665 3 34678888888
Q ss_pred EeccCCcccccCCccccCCCCCCeeeccCCccccc
Q 038318 69 LDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEE 103 (220)
Q Consensus 69 L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~ 103 (220)
|++++|.+++..|..|..+++|++|++++|.+++.
T Consensus 152 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 152 LSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 186 (597)
T ss_dssp EECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC
T ss_pred EEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc
Confidence 88888888877777888888888888888888753
No 73
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.55 E-value=1.5e-15 Score=122.34 Aligned_cols=121 Identities=11% Similarity=0.114 Sum_probs=101.9
Q ss_pred CCCCCCCceecCCCccCCccChhhhcc-----ccCCeeeccCCCCCCCCChhhhcCccC----------------hhhh-
Q 038318 3 GSLTYLRTPHLGSNNLTSSISLSLWNV-----ECILYIDLSSNSLSGFLPSNIEKLKVL----------------VDCF- 60 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~~l~~L----------------p~~~- 60 (220)
..+++|++|+|++|++++. |..+..+ ++|++|++++|++++..|..++.+++| |..+
T Consensus 118 ~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 196 (312)
T 1wwl_A 118 ATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALC 196 (312)
T ss_dssp CCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSC
T ss_pred hcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHH
Confidence 7899999999999999976 8888888 999999999999997777888888877 3344
Q ss_pred -cCCCCCCEEeccCCcccc--cCC-ccccCCCCCCeeeccCCcccccCCCC--cccccccccccccccCCC
Q 038318 61 -GSLTSLEFLDISNNNLFG--KIP-KSFKGLSRLKQLNAAHSKLEEEIPIE--RPLRNILAQSFIWNYTLC 125 (220)
Q Consensus 61 -~~l~~L~~L~ls~N~l~~--~~p-~~~~~l~~L~~l~l~~n~l~~~~p~~--~~~~~l~~l~~~~n~~l~ 125 (220)
..+++|++|++++|.+++ .++ ..+..+++|+.|++++|++++..|.. ..+++++.+++++| .+.
T Consensus 197 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N-~l~ 266 (312)
T 1wwl_A 197 PLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFT-GLK 266 (312)
T ss_dssp TTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTS-CCS
T ss_pred hccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCC-ccC
Confidence 889999999999999983 223 33457899999999999999876533 55789999999999 555
No 74
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.55 E-value=2.1e-14 Score=124.53 Aligned_cols=107 Identities=26% Similarity=0.362 Sum_probs=92.7
Q ss_pred CCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCccccC
Q 038318 7 YLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFKG 86 (220)
Q Consensus 7 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 86 (220)
.|+.|+|++|++++ +|. |+.+++|+.|+|++|.++ .+|.. ++.+++|+.|++++|.+++ +| .+++
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~----------~~~l~~L~~L~Ls~N~l~~-lp-~l~~ 506 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPA----------LAALRCLEVLQASDNALEN-VD-GVAN 506 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGG----------GGGCTTCCEEECCSSCCCC-CG-GGTT
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchh----------hhcCCCCCEEECCCCCCCC-Cc-ccCC
Confidence 58899999999994 786 999999999999999999 88874 5678899999999999996 67 7999
Q ss_pred CCCCCeeeccCCcccccC-CCC-cccccccccccccccCCCCCCC
Q 038318 87 LSRLKQLNAAHSKLEEEI-PIE-RPLRNILAQSFIWNYTLCGPPR 129 (220)
Q Consensus 87 l~~L~~l~l~~n~l~~~~-p~~-~~~~~l~~l~~~~n~~l~~~~~ 129 (220)
+++|+.|++++|++++.. |.. ..+++|+.+++++| .+++.++
T Consensus 507 l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N-~l~~~~~ 550 (567)
T 1dce_A 507 LPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGN-SLCQEEG 550 (567)
T ss_dssp CSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTS-GGGGSSS
T ss_pred CCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCC-cCCCCcc
Confidence 999999999999999875 666 78899999999999 6766543
No 75
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.55 E-value=1.5e-14 Score=125.27 Aligned_cols=116 Identities=17% Similarity=0.200 Sum_probs=64.5
Q ss_pred CCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCC--CCChhhhcCccC--------------h-hhhcCCCC
Q 038318 3 GSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSG--FLPSNIEKLKVL--------------V-DCFGSLTS 65 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L--------------p-~~~~~l~~ 65 (220)
..+++|++|++++|++++.+|..+..+++|++|++++|++++ .+|..+..+++| | ..+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 456677777777777776667667777777777777777663 222334444443 2 12444555
Q ss_pred CCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccc
Q 038318 66 LEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 66 L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n 121 (220)
|++|++++|.+++..|..+. ++|+.|++++|+++ .+|.. ..+++++.+++++|
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N 483 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASN 483 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSS
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCC
Confidence 55555555555544444332 45555555555555 33333 44455555555555
No 76
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.54 E-value=1.7e-14 Score=108.35 Aligned_cols=91 Identities=26% Similarity=0.304 Sum_probs=81.5
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIP 81 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p 81 (220)
|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|. .|..+++|+.|++++|.+++..+
T Consensus 50 ~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~----------~f~~l~~L~~L~L~~N~l~~~~~ 119 (193)
T 2wfh_A 50 LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPR----------TFDGLKSLRLLSLHGNDISVVPE 119 (193)
T ss_dssp GGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTT----------TTTTCTTCCEEECCSSCCCBCCT
T ss_pred hhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHH----------HhCCCCCCCEEECCCCCCCeeCh
Confidence 56789999999999999977778899999999999999999965554 46788999999999999997666
Q ss_pred ccccCCCCCCeeeccCCcccc
Q 038318 82 KSFKGLSRLKQLNAAHSKLEE 102 (220)
Q Consensus 82 ~~~~~l~~L~~l~l~~n~l~~ 102 (220)
..|..+++|+.|++++|.+..
T Consensus 120 ~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 120 GAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp TTTTTCTTCCEEECCSSCEEC
T ss_pred hhhhcCccccEEEeCCCCeec
Confidence 679999999999999999975
No 77
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.54 E-value=2.8e-14 Score=105.50 Aligned_cols=88 Identities=23% Similarity=0.280 Sum_probs=78.1
Q ss_pred CCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCcccc
Q 038318 6 TYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFK 85 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 85 (220)
++|++|+|++|++++..|..|..+++|++|+|++|++++ +|.. .|..+++|++|++++|++++..+..|.
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~~~---------~~~~l~~L~~L~L~~N~l~~l~~~~~~ 102 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA-IPTG---------VFDKLTQLTQLDLNDNHLKSIPRGAFD 102 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTT---------TTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCc-cChh---------HhCCcchhhEEECCCCccceeCHHHhc
Confidence 679999999999998889999999999999999999994 5542 357889999999999999966666699
Q ss_pred CCCCCCeeeccCCccccc
Q 038318 86 GLSRLKQLNAAHSKLEEE 103 (220)
Q Consensus 86 ~l~~L~~l~l~~n~l~~~ 103 (220)
.+++|+.|++++|.+...
T Consensus 103 ~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 103 NLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp TCTTCSEEECCSSCBCTT
T ss_pred cccCCCEEEeCCCCcccc
Confidence 999999999999999854
No 78
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.54 E-value=2.8e-14 Score=105.54 Aligned_cols=94 Identities=21% Similarity=0.229 Sum_probs=81.2
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIP 81 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p 81 (220)
|..+++|++|++++|++++..+..|..+++|++|++++|.+++..+. .+..+++|++|++++|.+++..+
T Consensus 48 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~----------~~~~l~~L~~L~l~~N~l~~~~~ 117 (177)
T 2o6r_A 48 FDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNG----------VFDKLTQLKELALDTNQLKSVPD 117 (177)
T ss_dssp TTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT----------TTTTCTTCCEEECCSSCCSCCCT
T ss_pred hcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHH----------HhhCCcccCEEECcCCcceEeCH
Confidence 67899999999999999966666789999999999999999954443 35778899999999999996666
Q ss_pred ccccCCCCCCeeeccCCcccccCC
Q 038318 82 KSFKGLSRLKQLNAAHSKLEEEIP 105 (220)
Q Consensus 82 ~~~~~l~~L~~l~l~~n~l~~~~p 105 (220)
..+..+++|++|++++|++.+..|
T Consensus 118 ~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 118 GIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTTTTCTTCCEEECCSSCBCCCHH
T ss_pred HHhcCCcccCEEEecCCCeeccCc
Confidence 667889999999999999987655
No 79
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.54 E-value=2e-14 Score=115.57 Aligned_cols=121 Identities=19% Similarity=0.133 Sum_probs=83.9
Q ss_pred CCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCC--CC-----hhhhcCccC----------hh----hhc
Q 038318 3 GSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGF--LP-----SNIEKLKVL----------VD----CFG 61 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~--~p-----~~~~~l~~L----------p~----~~~ 61 (220)
..+++|++|+|++|++++..|..|..+++|++|+|++|++.+. ++ ..+.+|+.| |. .+.
T Consensus 142 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~ 221 (310)
T 4glp_A 142 WLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAA 221 (310)
T ss_dssp TBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHH
T ss_pred hhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHh
Confidence 3467788888888888766667777888888888888877542 11 122223333 22 246
Q ss_pred CCCCCCEEeccCCcccccCCccccCC---CCCCeeeccCCcccccCCCCcccccccccccccccCCCC
Q 038318 62 SLTSLEFLDISNNNLFGKIPKSFKGL---SRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 62 ~l~~L~~L~ls~N~l~~~~p~~~~~l---~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n~~l~~ 126 (220)
.+++|++||+++|.+++..|..+..+ ++|++|++++|+++ .+|.. ..++++.+++++| .+.+
T Consensus 222 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~-~~~~L~~L~Ls~N-~l~~ 286 (310)
T 4glp_A 222 AGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKG-LPAKLRVLDLSSN-RLNR 286 (310)
T ss_dssp HTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSC-CCSCCSCEECCSC-CCCS
T ss_pred cCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhh-hcCCCCEEECCCC-cCCC
Confidence 77888888888888887777777666 58888888888888 55654 2367888888888 5554
No 80
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.54 E-value=1.7e-14 Score=119.46 Aligned_cols=100 Identities=18% Similarity=0.231 Sum_probs=67.7
Q ss_pred CCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC-------------hh-hhcCCCCCCE
Q 038318 3 GSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL-------------VD-CFGSLTSLEF 68 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L-------------p~-~~~~l~~L~~ 68 (220)
..+++|++|+|++|.+++..|..|..+++|++|++++|.+++..|..++.+++| |. .|..+++|++
T Consensus 66 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~ 145 (390)
T 3o6n_A 66 DSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTT 145 (390)
T ss_dssp HHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcE
Confidence 456677777777777775555577777777777777777775555555555544 32 3566777777
Q ss_pred EeccCCcccccCCccccCCCCCCeeeccCCcccc
Q 038318 69 LDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEE 102 (220)
Q Consensus 69 L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~ 102 (220)
|++++|.+++..|..+..+++|++|++++|++++
T Consensus 146 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 146 LSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp EECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred EECCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 7777777776666667777777777777777664
No 81
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.53 E-value=9.5e-15 Score=109.98 Aligned_cols=113 Identities=18% Similarity=0.229 Sum_probs=77.9
Q ss_pred CCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCCEE
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLEFL 69 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~~L 69 (220)
.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++| |..++.+++|++|
T Consensus 42 ~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 42 QMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 4678999999999999 778 7999999999999999775 33455555444 4455566666666
Q ss_pred eccCCcccccCCccccCCCCCCeeeccCCc-ccccCCCCcccccccccccccc
Q 038318 70 DISNNNLFGKIPKSFKGLSRLKQLNAAHSK-LEEEIPIERPLRNILAQSFIWN 121 (220)
Q Consensus 70 ~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~-l~~~~p~~~~~~~l~~l~~~~n 121 (220)
++++|.+++..|..+..+++|++|++++|+ ++ .+|....+++|+.+++++|
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~~l~~l~~L~~L~l~~n 169 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIMPLKTLPELKSLNIQFD 169 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCGGGGGCSSCCEEECTTB
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccHhhcCCCCCCEEECCCC
Confidence 666666665555666666666666666665 33 3443355566666666666
No 82
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.53 E-value=2e-14 Score=130.08 Aligned_cols=126 Identities=21% Similarity=0.210 Sum_probs=108.0
Q ss_pred CCCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChh--hhcCccC---------------hhhhcCC
Q 038318 1 MLGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSN--IEKLKVL---------------VDCFGSL 63 (220)
Q Consensus 1 ~l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~--~~~l~~L---------------p~~~~~l 63 (220)
+|+++++|++|+|++|++++..|..|.++++|++|+|++|.+++.+|.. ++.+++| +..|+.+
T Consensus 68 ~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L 147 (844)
T 3j0a_A 68 AFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKL 147 (844)
T ss_dssp TTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTC
T ss_pred HhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhC
Confidence 4788999999999999999888999999999999999999999877765 7777776 3679999
Q ss_pred CCCCEEeccCCcccccCCccccCC--CCCCeeeccCCcccccCCCC-cccc------cccccccccccCCCCC
Q 038318 64 TSLEFLDISNNNLFGKIPKSFKGL--SRLKQLNAAHSKLEEEIPIE-RPLR------NILAQSFIWNYTLCGP 127 (220)
Q Consensus 64 ~~L~~L~ls~N~l~~~~p~~~~~l--~~L~~l~l~~n~l~~~~p~~-~~~~------~l~~l~~~~n~~l~~~ 127 (220)
++|++|++++|.+++..|..+..+ ++|+.|+++.|.+.+..|.. ..+. .++.+++++| .+.+.
T Consensus 148 ~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n-~l~~~ 219 (844)
T 3j0a_A 148 NSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGN-GWTVD 219 (844)
T ss_dssp SSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSC-CSSTT
T ss_pred CCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCC-cCchh
Confidence 999999999999999999999887 89999999999999877754 3333 3889999988 55443
No 83
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.53 E-value=3.2e-14 Score=116.30 Aligned_cols=109 Identities=25% Similarity=0.191 Sum_probs=91.4
Q ss_pred CCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCcccc
Q 038318 6 TYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFK 85 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 85 (220)
++|++|++++|++++..+..|.++++|++|++++|.+++..|. .|..+++|++|++++|.+++..+..+.
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~----------~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 121 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEED----------SFSSLGSLEHLDLSYNYLSNLSSSWFK 121 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTT----------TTTTCTTCCEEECCSSCCSSCCHHHHT
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHh----------hcCCCCCCCEEECCCCcCCcCCHhHhC
Confidence 4799999999999965555899999999999999999865555 467788999999999999965555589
Q ss_pred CCCCCCeeeccCCcccccCCC--C-cccccccccccccccCCC
Q 038318 86 GLSRLKQLNAAHSKLEEEIPI--E-RPLRNILAQSFIWNYTLC 125 (220)
Q Consensus 86 ~l~~L~~l~l~~n~l~~~~p~--~-~~~~~l~~l~~~~n~~l~ 125 (220)
++++|++|++++|++++ +|. . ..+++++.+++++|..+.
T Consensus 122 ~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~ 163 (353)
T 2z80_A 122 PLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFT 163 (353)
T ss_dssp TCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCC
T ss_pred CCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCcccc
Confidence 99999999999999995 554 3 778999999999984333
No 84
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.52 E-value=1.5e-14 Score=111.95 Aligned_cols=118 Identities=18% Similarity=0.213 Sum_probs=70.0
Q ss_pred CCCCCCCCceecCCCc-cCCccChhhhccccCCeeeccC-CCCCCCCChhhhcCccC-------------hhhhcCCCCC
Q 038318 2 LGSLTYLRTPHLGSNN-LTSSISLSLWNVECILYIDLSS-NSLSGFLPSNIEKLKVL-------------VDCFGSLTSL 66 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~-l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L-------------p~~~~~l~~L 66 (220)
|.++++|++|++++|+ +++..+..|.++++|++|++++ |.+++..+..+..+++| |. +..+++|
T Consensus 51 ~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~lp~-~~~l~~L 129 (239)
T 2xwt_C 51 FSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKMFPD-LTKVYST 129 (239)
T ss_dssp TTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCSCCC-CTTCCBC
T ss_pred ccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCccccc-ccccccc
Confidence 5566777777777775 6633344666777777777776 77764434445444444 33 5555555
Q ss_pred C---EEeccCC-cccccCCccccCCCCCC-eeeccCCcccccCCCC-cccccccccccccc
Q 038318 67 E---FLDISNN-NLFGKIPKSFKGLSRLK-QLNAAHSKLEEEIPIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 67 ~---~L~ls~N-~l~~~~p~~~~~l~~L~-~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n 121 (220)
+ +|++++| .+++..+..|.++++|+ .|++++|+++ .+|.. ...++++.+++++|
T Consensus 130 ~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n 189 (239)
T 2xwt_C 130 DIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKN 189 (239)
T ss_dssp CSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTC
T ss_pred ccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCC
Confidence 5 6666666 66654445566666666 6666666666 34433 22245666666666
No 85
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.52 E-value=3.3e-14 Score=115.87 Aligned_cols=104 Identities=19% Similarity=0.108 Sum_probs=69.9
Q ss_pred ceecCCC-ccCCccChhhhccccCCeeeccC-CCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCccccCC
Q 038318 10 TPHLGSN-NLTSSISLSLWNVECILYIDLSS-NSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSFKGL 87 (220)
Q Consensus 10 ~L~Ls~n-~l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l 87 (220)
.++++++ +++ .+|. |..+++|+.|+|++ |.+++..|. .|..+++|+.|+|++|+|++..|..|.++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~----------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 79 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELR----------DLRGLGELRNLTIVKSGLRFVAPDAFHFT 79 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGG----------GSCSCCCCSEEECCSSCCCEECTTGGGSC
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChh----------HhccccCCCEEECCCCccceeCHHHhcCC
Confidence 4577776 777 5776 77777777777775 777743333 35667777777777777777777777777
Q ss_pred CCCCeeeccCCcccccCCCCcccccccccccccccCCC
Q 038318 88 SRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWNYTLC 125 (220)
Q Consensus 88 ~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n~~l~ 125 (220)
++|+.|+|++|+|++..+.......|+.+++.+|+..|
T Consensus 80 ~~L~~L~l~~N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 80 PRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SCCCEEECCSSCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred cCCCEEeCCCCccceeCHHHcccCCceEEEeeCCCccC
Confidence 77777777777777544333222237777777776555
No 86
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.52 E-value=7.9e-14 Score=112.88 Aligned_cols=122 Identities=19% Similarity=0.271 Sum_probs=87.5
Q ss_pred CCCCCCCCceecCCCccC--CccChhhhccccCCeeeccCCCCCCCCChhh-hcCccC-----------hhhhcCCCCCC
Q 038318 2 LGSLTYLRTPHLGSNNLT--SSISLSLWNVECILYIDLSSNSLSGFLPSNI-EKLKVL-----------VDCFGSLTSLE 67 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~--g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L-----------p~~~~~l~~L~ 67 (220)
|.++++|++|++++|.++ +..|..+..+++|++|++++|.++ .+|..+ .+++.| |..+..+++|+
T Consensus 141 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 219 (330)
T 1xku_A 141 FNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLA 219 (330)
T ss_dssp HTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCC
T ss_pred hcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCccccccCCEEECCCCcCCccCHHHhcCCCCCC
Confidence 355667777777777764 255666677777777777777776 455433 223322 67788888888
Q ss_pred EEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCC
Q 038318 68 FLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 68 ~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~ 126 (220)
.|++++|.+++..+..+..+++|+.|++++|+++ .+|.. ..+++++.+++++| .+.+
T Consensus 220 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N-~i~~ 277 (330)
T 1xku_A 220 KLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNN-NISA 277 (330)
T ss_dssp EEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSS-CCCC
T ss_pred EEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCC-cCCc
Confidence 8888888888777778888888888888888888 56655 67788888888888 4554
No 87
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.52 E-value=4.4e-14 Score=111.17 Aligned_cols=116 Identities=22% Similarity=0.220 Sum_probs=84.1
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhh-hcCccC---------hhhhcCCCCCCEEec
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNI-EKLKVL---------VDCFGSLTSLEFLDI 71 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L---------p~~~~~l~~L~~L~l 71 (220)
+..+++|++|+|++|++++ +|+ +..+++|++|++++|++++ +|... .+++.| ...+..+++|+.|++
T Consensus 59 l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~-l~~~~~~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L 135 (263)
T 1xeu_A 59 MQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKN-LNGIPSACLSRLFLDNNELRDTDSLIHLKNLEILSI 135 (263)
T ss_dssp GGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSC-CTTCCCSSCCEEECCSSCCSBSGGGTTCTTCCEEEC
T ss_pred HhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCC-cCccccCcccEEEccCCccCCChhhcCcccccEEEC
Confidence 4567788888888888874 444 7788888888888888874 44321 222222 345788888888999
Q ss_pred cCCcccccCCccccCCCCCCeeeccCCcccccCCCCcccccccccccccccC
Q 038318 72 SNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWNYT 123 (220)
Q Consensus 72 s~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n~~ 123 (220)
++|++++. + .+..+++|+.|++++|++++. +....+++++.+++++|+.
T Consensus 136 s~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~ 184 (263)
T 1xeu_A 136 RNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKC 184 (263)
T ss_dssp TTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEE
T ss_pred CCCcCCCC-h-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcc
Confidence 98888853 4 578888899999999988865 4336778888888888843
No 88
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.51 E-value=5e-14 Score=120.72 Aligned_cols=123 Identities=28% Similarity=0.291 Sum_probs=81.6
Q ss_pred CCCCCCCCceecCCCccCC--ccChhhhccccCCeeeccCCCCCCCCChh-hhcCccC-----------hhhhcCC-CCC
Q 038318 2 LGSLTYLRTPHLGSNNLTS--SISLSLWNVECILYIDLSSNSLSGFLPSN-IEKLKVL-----------VDCFGSL-TSL 66 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L-----------p~~~~~l-~~L 66 (220)
++++++|++|+|++|++++ .+|..+..+++|++|++++|.+++.+|.. +..+++| ......+ ++|
T Consensus 344 ~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L 423 (520)
T 2z7x_B 344 CGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRI 423 (520)
T ss_dssp CCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCCTTC
T ss_pred hccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhcccC
Confidence 4667777777777777775 55666777777777777777777656654 4444433 1111222 577
Q ss_pred CEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC--cccccccccccccccCCCC
Q 038318 67 EFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE--RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 67 ~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~--~~~~~l~~l~~~~n~~l~~ 126 (220)
+.|++++|+++ .+|..+..+++|++|++++|+++. +|.. ..+++++.+++++|+..|.
T Consensus 424 ~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 424 KVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp CEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCccc
Confidence 77777777777 677766677777777777777774 4442 5566777777777765553
No 89
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.51 E-value=1.6e-14 Score=116.60 Aligned_cols=106 Identities=20% Similarity=0.141 Sum_probs=53.1
Q ss_pred CCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCccc
Q 038318 5 LTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSF 84 (220)
Q Consensus 5 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~~ 84 (220)
+++|++|++++|++++..|..+..+++|++|++++|.+++..|..+. ..+++|++|++++|.+++. |. .
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---------~~l~~L~~L~L~~N~l~~~-~~-~ 187 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA---------ASSDTLEHLNLQYNFIYDV-KG-Q 187 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGG---------GGTTTCCEEECTTSCCCEE-EC-C
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHh---------hccCcCCEEECCCCcCccc-cc-c
Confidence 45566666666666655555666666666666666666654444331 2344445555555544422 21 1
Q ss_pred cCCCCCCeeeccCCcccccCCCCcccccccccccccc
Q 038318 85 KGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWN 121 (220)
Q Consensus 85 ~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n 121 (220)
..+++|++|++++|++++..+....+++++.+++++|
T Consensus 188 ~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N 224 (317)
T 3o53_A 188 VVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNN 224 (317)
T ss_dssp CCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTS
T ss_pred cccccCCEEECCCCcCCcchhhhcccCcccEEECcCC
Confidence 2244444444444444432222233444444444444
No 90
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.51 E-value=9.9e-14 Score=112.46 Aligned_cols=116 Identities=23% Similarity=0.320 Sum_probs=70.3
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhh-cCccC-----------hhhhcCCCCCCEE
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIE-KLKVL-----------VDCFGSLTSLEFL 69 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L-----------p~~~~~l~~L~~L 69 (220)
|.++++|++|+|++|++++..|..|..+++|++|++++|.++ .+|..+. +++.| +..+..+++|++|
T Consensus 74 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L 152 (332)
T 2ft3_A 74 FKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCI 152 (332)
T ss_dssp TTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCCTTCCEEECCSSCCCCCCSGGGSSCSSCCEE
T ss_pred hhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCccccccCCEEECCCCccCccCHhHhCCCccCCEE
Confidence 567778888888888887666777888888888888888877 5665442 22222 3456677777777
Q ss_pred eccCCccc--ccCCccccCCCCCCeeeccCCcccccCCCCcccccccccccccc
Q 038318 70 DISNNNLF--GKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWN 121 (220)
Q Consensus 70 ~ls~N~l~--~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n 121 (220)
++++|.++ +..|..+..+ +|+.|++++|++++ +|.. ..++++.+++++|
T Consensus 153 ~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~-~~~~L~~L~l~~n 203 (332)
T 2ft3_A 153 EMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKD-LPETLNELHLDHN 203 (332)
T ss_dssp ECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSS-SCSSCSCCBCCSS
T ss_pred ECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcc-ccCCCCEEECCCC
Confidence 77777764 2445555554 45555555544443 2221 1134444444444
No 91
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.51 E-value=7.6e-15 Score=130.81 Aligned_cols=112 Identities=24% Similarity=0.235 Sum_probs=90.9
Q ss_pred CCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC-------------hhhhcCCCCCCEE
Q 038318 3 GSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL-------------VDCFGSLTSLEFL 69 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L-------------p~~~~~l~~L~~L 69 (220)
.++++|++|+|++|.|+ .+|..|+++++|++|+|++|.|+ .+|..++.|++| |..|+.+++|+.|
T Consensus 244 ~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L 321 (727)
T 4b8c_D 244 FKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFL 321 (727)
T ss_dssp GGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCE
T ss_pred cCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEE
Confidence 46889999999999999 99999999999999999999999 889999888877 8889999999999
Q ss_pred eccCCcccccCCccccCCCC-CCeeeccCCcccccCCCCcccccccccccccc
Q 038318 70 DISNNNLFGKIPKSFKGLSR-LKQLNAAHSKLEEEIPIERPLRNILAQSFIWN 121 (220)
Q Consensus 70 ~ls~N~l~~~~p~~~~~l~~-L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n 121 (220)
++++|.+++.+|..+..+.. +..+++++|.+++.+|.. +..++++.|
T Consensus 322 ~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~-----l~~l~l~~n 369 (727)
T 4b8c_D 322 GVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE-----RRFIEINTD 369 (727)
T ss_dssp ECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--------------
T ss_pred eCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc-----cceeEeecc
Confidence 99999999999988765432 234789999999988863 344445444
No 92
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.50 E-value=1.2e-13 Score=111.88 Aligned_cols=117 Identities=21% Similarity=0.272 Sum_probs=79.1
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhh-cCccC-----------hhhhcCCCCCCEE
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIE-KLKVL-----------VDCFGSLTSLEFL 69 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L-----------p~~~~~l~~L~~L 69 (220)
|+++++|++|+|++|++++..|..|..+++|++|++++|.++ .+|..+. +++.| +..+..+++|+.|
T Consensus 72 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 150 (330)
T 1xku_A 72 FKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVV 150 (330)
T ss_dssp TTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEE
T ss_pred hccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhcccccEEECCCCcccccCHhHhcCCccccEE
Confidence 567788888888888888666777888888888888888877 5665432 23332 5567777788888
Q ss_pred eccCCccc--ccCCccccCCCCCCeeeccCCcccccCCCCcccccccccccccc
Q 038318 70 DISNNNLF--GKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWN 121 (220)
Q Consensus 70 ~ls~N~l~--~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n 121 (220)
++++|.++ +..+..+.++++|+.|++++|+++. +|.. ..++++.+++++|
T Consensus 151 ~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~-~~~~L~~L~l~~n 202 (330)
T 1xku_A 151 ELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQG-LPPSLTELHLDGN 202 (330)
T ss_dssp ECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSS-CCTTCSEEECTTS
T ss_pred ECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcc-ccccCCEEECCCC
Confidence 88887775 3556667777777777777776663 3432 2245555565555
No 93
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.50 E-value=8.3e-14 Score=111.13 Aligned_cols=39 Identities=23% Similarity=0.243 Sum_probs=19.5
Q ss_pred CCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCC
Q 038318 3 GSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLS 43 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 43 (220)
..+++|++|+|++|++++. ++ +..+++|++|++++|.++
T Consensus 65 ~~l~~L~~L~L~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~ 103 (291)
T 1h6t_A 65 QYLPNVTKLFLNGNKLTDI-KP-LANLKNLGWLFLDENKVK 103 (291)
T ss_dssp GGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCC
T ss_pred hcCCCCCEEEccCCccCCC-cc-cccCCCCCEEECCCCcCC
Confidence 3445555555555555532 22 455555555555555554
No 94
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.50 E-value=1.1e-14 Score=124.17 Aligned_cols=43 Identities=16% Similarity=0.140 Sum_probs=21.1
Q ss_pred hhcCCCCCCEEeccCCcccccCCcccc-CCCCCCeeeccCCccc
Q 038318 59 CFGSLTSLEFLDISNNNLFGKIPKSFK-GLSRLKQLNAAHSKLE 101 (220)
Q Consensus 59 ~~~~l~~L~~L~ls~N~l~~~~p~~~~-~l~~L~~l~l~~n~l~ 101 (220)
.++.+++|+.|++++|.+++..|..+. .+++|+.|++++|.++
T Consensus 139 ~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 139 DEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred hhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 444455555555555555554444443 3444444444444444
No 95
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.50 E-value=6.1e-14 Score=122.41 Aligned_cols=122 Identities=12% Similarity=0.117 Sum_probs=102.8
Q ss_pred CCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCCEE
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLEFL 69 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~~L 69 (220)
.+++++.|++++|.++...+..|..+++|++|+|++|.+++..|..++.+++| |..|+.+++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 35788999999999985444557889999999999999997777788887776 6678999999999
Q ss_pred eccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCC
Q 038318 70 DISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 70 ~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~ 126 (220)
++++|.+++..+..|.++++|++|++++|.+++..|.. ..+++|+.+++++| .+.+
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~ 185 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSN-RLTH 185 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTS-CCSB
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCC-CCCC
Confidence 99999999655566789999999999999999877765 77889999999988 4443
No 96
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.49 E-value=5e-14 Score=103.22 Aligned_cols=109 Identities=20% Similarity=0.107 Sum_probs=92.6
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccC-
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKI- 80 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~- 80 (220)
+..+++|++|++++|.+++. ..+..+++|++|++++|.+++.+|. .+..+++|++|++++|.+++..
T Consensus 45 ~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~----------~~~~l~~L~~L~Ls~N~l~~~~~ 112 (168)
T 2ell_A 45 TAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDM----------LAEKLPNLTHLNLSGNKLKDIST 112 (168)
T ss_dssp CGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCH----------HHHHCTTCCEEECBSSSCCSSGG
T ss_pred HHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHH----------HHhhCCCCCEEeccCCccCcchh
Confidence 46789999999999999955 7899999999999999999976776 3456889999999999998532
Q ss_pred CccccCCCCCCeeeccCCcccccCC---CC-ccccccccccccccc
Q 038318 81 PKSFKGLSRLKQLNAAHSKLEEEIP---IE-RPLRNILAQSFIWNY 122 (220)
Q Consensus 81 p~~~~~l~~L~~l~l~~n~l~~~~p---~~-~~~~~l~~l~~~~n~ 122 (220)
+..+..+++|+.|++++|++++..+ .. ..+++++.+++++|.
T Consensus 113 ~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~ 158 (168)
T 2ell_A 113 LEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRE 158 (168)
T ss_dssp GGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETT
T ss_pred HHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCC
Confidence 2789999999999999999996544 12 678899999999983
No 97
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.48 E-value=1.3e-13 Score=120.37 Aligned_cols=60 Identities=20% Similarity=0.410 Sum_probs=37.0
Q ss_pred hhcCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCCcccccccccccccc
Q 038318 59 CFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWN 121 (220)
Q Consensus 59 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n 121 (220)
.+..+++|+.|++++|.+++..| +..+++|+.|+|++|++++ +|....+++|+.|++++|
T Consensus 148 ~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l~~l~~l~~L~~L~L~~N 207 (605)
T 1m9s_A 148 VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LRALAGLKNLDVLELFSQ 207 (605)
T ss_dssp GGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CGGGTTCTTCSEEECCSE
T ss_pred hhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC-ChHHccCCCCCEEEccCC
Confidence 45556666666666666664433 5666666666666666664 233355667777777777
No 98
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.48 E-value=1.2e-13 Score=119.55 Aligned_cols=122 Identities=26% Similarity=0.324 Sum_probs=79.4
Q ss_pred CCCCCCCCceecCCCccCC--ccChhhhccccCCeeeccCCCCCCCCChh-hhcCccC-----------hhhhcCC-CCC
Q 038318 2 LGSLTYLRTPHLGSNNLTS--SISLSLWNVECILYIDLSSNSLSGFLPSN-IEKLKVL-----------VDCFGSL-TSL 66 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L-----------p~~~~~l-~~L 66 (220)
++++++|++|+|++|++++ .+|..+..+++|++|++++|.+++.+|.. +..+++| ...+..+ ++|
T Consensus 373 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~~L 452 (562)
T 3a79_B 373 CSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKV 452 (562)
T ss_dssp CCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCCTTC
T ss_pred hcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhcCcC
Confidence 4567777777777777774 33456777777777777777777655543 4344433 1222233 577
Q ss_pred CEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC--cccccccccccccccCCC
Q 038318 67 EFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE--RPLRNILAQSFIWNYTLC 125 (220)
Q Consensus 67 ~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~--~~~~~l~~l~~~~n~~l~ 125 (220)
+.|++++|+++ .+|..+..+++|+.|++++|+++. +|.. ..+++++.+++++|+..|
T Consensus 453 ~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c 511 (562)
T 3a79_B 453 KVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDC 511 (562)
T ss_dssp SEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCC
T ss_pred CEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCC
Confidence 77777777777 666666677777777777777774 4442 566677777777776555
No 99
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.48 E-value=1.5e-13 Score=111.43 Aligned_cols=68 Identities=18% Similarity=0.183 Sum_probs=53.8
Q ss_pred hhhhcCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCC
Q 038318 57 VDCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 57 p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~ 126 (220)
|..+..+++|+.|++++|.+++..+..+..+++|+.|++++|+++ .+|.. ..+++++.+++++| .+.+
T Consensus 210 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N-~l~~ 278 (332)
T 2ft3_A 210 LEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTN-NITK 278 (332)
T ss_dssp TTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSS-CCCB
T ss_pred HHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCC-CCCc
Confidence 467778888888888888888777777888888888888888888 56665 67788888888888 4443
No 100
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.48 E-value=9.1e-14 Score=115.03 Aligned_cols=117 Identities=12% Similarity=0.145 Sum_probs=97.3
Q ss_pred CCCCCCceecCCCccCCccChh-hhccccCCeeeccCCCCCCCCChhhhcCccC--------------hhhhcCCCCCCE
Q 038318 4 SLTYLRTPHLGSNNLTSSISLS-LWNVECILYIDLSSNSLSGFLPSNIEKLKVL--------------VDCFGSLTSLEF 68 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--------------p~~~~~l~~L~~ 68 (220)
.+++++.|++++|.++ .+|.. +..+++|++|++++|.+++..|..+..+++| |..++.+++|++
T Consensus 43 ~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 3588999999999998 56654 7889999999999999997666678777766 667889999999
Q ss_pred EeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccc
Q 038318 69 LDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 69 L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n 121 (220)
|++++|.++...+..|.++++|++|++++|++++..|.. ..+++++.+++++|
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 175 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSN 175 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSS
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCC
Confidence 999999998444444688999999999999998766654 67788888888888
No 101
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.48 E-value=1.6e-13 Score=109.52 Aligned_cols=114 Identities=22% Similarity=0.374 Sum_probs=88.9
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC------------hhhhcCCCCCCEE
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL------------VDCFGSLTSLEFL 69 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L------------p~~~~~l~~L~~L 69 (220)
+.++++|++|++++|++++ +| .+..+++|++|++++|.+++ + +.+..+++| ...+..+++|++|
T Consensus 86 l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L 161 (291)
T 1h6t_A 86 LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDITVLSRLTKLDTL 161 (291)
T ss_dssp GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCCGGGGGCTTCSEE
T ss_pred cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcchhhccCCCCCEE
Confidence 4678889999999999884 44 48888899999999998884 3 456665555 4467788889999
Q ss_pred eccCCcccccCCccccCCCCCCeeeccCCcccccCCCCccccccccccccccc
Q 038318 70 DISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWNY 122 (220)
Q Consensus 70 ~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n~ 122 (220)
++++|.+++..| +..+++|+.|++++|++++ ++....+++|+.+++++|+
T Consensus 162 ~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~~l~~l~~L~~L~l~~n~ 211 (291)
T 1h6t_A 162 SLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LRALAGLKNLDVLELFSQE 211 (291)
T ss_dssp ECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CGGGTTCTTCSEEEEEEEE
T ss_pred EccCCccccchh--hcCCCccCEEECCCCcCCC-ChhhccCCCCCEEECcCCc
Confidence 999998885444 8888899999999998885 4444677888888998884
No 102
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.47 E-value=6.2e-14 Score=103.61 Aligned_cols=106 Identities=20% Similarity=0.135 Sum_probs=84.5
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccc-cCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVE-CILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKI 80 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~ 80 (220)
+.++++|+.|++++|+++ .+|. +..+. +|++|++++|.+++. + .+..+++|++|++++|.+++..
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~-----------~l~~l~~L~~L~Ls~N~l~~~~ 80 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-D-----------GFPLLRRLKTLLVNNNRICRIG 80 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-C-----------CCCCCSSCCEEECCSSCCCEEC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-c-----------ccccCCCCCEEECCCCcccccC
Confidence 356789999999999999 5665 55555 999999999999853 3 3677889999999999998655
Q ss_pred CccccCCCCCCeeeccCCcccccCCC--C-ccccccccccccccc
Q 038318 81 PKSFKGLSRLKQLNAAHSKLEEEIPI--E-RPLRNILAQSFIWNY 122 (220)
Q Consensus 81 p~~~~~l~~L~~l~l~~n~l~~~~p~--~-~~~~~l~~l~~~~n~ 122 (220)
+..+..+++|++|++++|+++. +|. . ..+++++.+++++|+
T Consensus 81 ~~~~~~l~~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~ 124 (176)
T 1a9n_A 81 EGLDQALPDLTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNP 124 (176)
T ss_dssp SCHHHHCTTCCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSG
T ss_pred cchhhcCCCCCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCC
Confidence 5555889999999999999964 454 2 677888999999983
No 103
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.47 E-value=1.6e-13 Score=110.33 Aligned_cols=59 Identities=14% Similarity=0.255 Sum_probs=29.9
Q ss_pred hcCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCCcccccccccccccc
Q 038318 60 FGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWN 121 (220)
Q Consensus 60 ~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n 121 (220)
+..+++|+.|++++|.+++. +. +..+++|++|++++|++++..+ ...+++++.+++++|
T Consensus 169 l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N 227 (308)
T 1h6u_A 169 LANLSKLTTLKADDNKISDI-SP-LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQ 227 (308)
T ss_dssp GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEE
T ss_pred hcCCCCCCEEECCCCccCcC-hh-hcCCCCCCEEEccCCccCcccc-ccCCCCCCEEEccCC
Confidence 44555555555555555432 22 4555555555555555554322 244555555666555
No 104
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.47 E-value=2.1e-13 Score=109.61 Aligned_cols=39 Identities=31% Similarity=0.324 Sum_probs=21.9
Q ss_pred CCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCC
Q 038318 3 GSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLS 43 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 43 (220)
..+++|++|+|++|+++ .+|. +..+++|++|++++|.++
T Consensus 60 ~~l~~L~~L~L~~n~i~-~~~~-~~~l~~L~~L~L~~n~l~ 98 (308)
T 1h6u_A 60 QYLNNLIGLELKDNQIT-DLAP-LKNLTKITELELSGNPLK 98 (308)
T ss_dssp GGCTTCCEEECCSSCCC-CCGG-GTTCCSCCEEECCSCCCS
T ss_pred hccCCCCEEEccCCcCC-CChh-HccCCCCCEEEccCCcCC
Confidence 34555666666666665 2333 555666666666666555
No 105
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.46 E-value=1.4e-13 Score=110.68 Aligned_cols=81 Identities=22% Similarity=0.245 Sum_probs=59.5
Q ss_pred ccccCCeeeccCCCCCCCCChhhhcCccChhhhcCC---CCCCEEeccCCcccccCCccccCCCCCCeeeccCCcccccC
Q 038318 28 NVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSL---TSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEI 104 (220)
Q Consensus 28 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l---~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~ 104 (220)
.+++|++|+|++|.+++..|. .+..+ ++|++|++++|.++ .+|..+. ++|+.|++++|++++.
T Consensus 222 ~l~~L~~L~Ls~N~l~~~~p~----------~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~- 287 (310)
T 4glp_A 222 AGVQPHSLDLSHNSLRATVNP----------SAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA- 287 (310)
T ss_dssp HTCCCSSEECTTSCCCCCCCS----------CCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-
T ss_pred cCCCCCEEECCCCCCCccchh----------hHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-
Confidence 344444444444444433343 44554 69999999999999 7888775 7999999999999973
Q ss_pred CCCccccccccccccccc
Q 038318 105 PIERPLRNILAQSFIWNY 122 (220)
Q Consensus 105 p~~~~~~~l~~l~~~~n~ 122 (220)
|....+++++.+++++|+
T Consensus 288 ~~~~~l~~L~~L~L~~N~ 305 (310)
T 4glp_A 288 PQPDELPEVDNLTLDGNP 305 (310)
T ss_dssp CCTTSCCCCSCEECSSTT
T ss_pred chhhhCCCccEEECcCCC
Confidence 444678999999999994
No 106
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.46 E-value=1.5e-13 Score=111.99 Aligned_cols=90 Identities=21% Similarity=0.170 Sum_probs=77.9
Q ss_pred CCCCCCCCceecCC-CccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccC
Q 038318 2 LGSLTYLRTPHLGS-NNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKI 80 (220)
Q Consensus 2 l~~l~~L~~L~Ls~-n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~ 80 (220)
|..+++|+.|+|++ |+|++..|..|.++++|+.|+|++|+|++..|. .|..+++|+.|+|++|+|++..
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~----------~~~~l~~L~~L~l~~N~l~~~~ 96 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD----------AFHFTPRLSRLNLSFNALESLS 96 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT----------GGGSCSCCCEEECCSSCCSCCC
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH----------HhcCCcCCCEEeCCCCccceeC
Confidence 46778899999996 999977778899999999999999999976665 4678889999999999999666
Q ss_pred CccccCCCCCCeeeccCCcccc
Q 038318 81 PKSFKGLSRLKQLNAAHSKLEE 102 (220)
Q Consensus 81 p~~~~~l~~L~~l~l~~n~l~~ 102 (220)
+..|..+. |+.|++++|.+..
T Consensus 97 ~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 97 WKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp STTTCSCC-CCEEECCSSCCCC
T ss_pred HHHcccCC-ceEEEeeCCCccC
Confidence 66666665 9999999999974
No 107
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.46 E-value=1.4e-13 Score=111.97 Aligned_cols=117 Identities=21% Similarity=0.251 Sum_probs=70.9
Q ss_pred CCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC------------hhhhcCCCCCCEEec
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL------------VDCFGSLTSLEFLDI 71 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L------------p~~~~~l~~L~~L~l 71 (220)
.+++|+.|++++|.+++..+ +..+++|+.|++++|.+++ +|. +..+++| .+.+..+++|+.|++
T Consensus 197 ~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l 272 (347)
T 4fmz_A 197 SLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISDINAVKDLTKLKMLNV 272 (347)
T ss_dssp GCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEEC
T ss_pred CCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCCChhHhcCCCcCEEEc
Confidence 44555555555555553222 5555555555555555552 222 3333333 234667777888888
Q ss_pred cCCcccccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCCC
Q 038318 72 SNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCGP 127 (220)
Q Consensus 72 s~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~~ 127 (220)
++|.+++. +.+..+++|+.|++++|++++..|.. ..+++++.+++++| .+.+.
T Consensus 273 ~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n-~l~~~ 326 (347)
T 4fmz_A 273 GSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQN-HITDI 326 (347)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSS-SCCCC
T ss_pred cCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCC-ccccc
Confidence 88877743 34677778888888888777655544 56677777888777 44443
No 108
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.46 E-value=5.6e-14 Score=103.84 Aligned_cols=102 Identities=12% Similarity=0.101 Sum_probs=86.7
Q ss_pred CCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCc--c
Q 038318 6 TYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPK--S 83 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~--~ 83 (220)
++|++|+|++|++++ + +.+..+++|++|++++|.++ .+|.. .+..+++|++|++++|.++ .+|. .
T Consensus 42 ~~L~~L~Ls~N~l~~-~-~~l~~l~~L~~L~Ls~N~l~-~~~~~---------~~~~l~~L~~L~L~~N~i~-~~~~~~~ 108 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRK-L-DGFPLLRRLKTLLVNNNRIC-RIGEG---------LDQALPDLTELILTNNSLV-ELGDLDP 108 (176)
T ss_dssp TCCSEEECCSSCCCE-E-CCCCCCSSCCEEECCSSCCC-EECSC---------HHHHCTTCCEEECCSCCCC-CGGGGGG
T ss_pred CCCCEEECCCCCCCc-c-cccccCCCCCEEECCCCccc-ccCcc---------hhhcCCCCCEEECCCCcCC-cchhhHh
Confidence 389999999999995 4 67999999999999999999 45542 2467889999999999996 5666 7
Q ss_pred ccCCCCCCeeeccCCcccccCCC-----Ccccccccccccccc
Q 038318 84 FKGLSRLKQLNAAHSKLEEEIPI-----ERPLRNILAQSFIWN 121 (220)
Q Consensus 84 ~~~l~~L~~l~l~~n~l~~~~p~-----~~~~~~l~~l~~~~n 121 (220)
+..+++|+.|++++|.++. +|. ...+++++.+++++|
T Consensus 109 l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n 150 (176)
T 1a9n_A 109 LASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKV 150 (176)
T ss_dssp GGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEEC
T ss_pred hhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcC
Confidence 8999999999999999984 554 267788999999888
No 109
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.46 E-value=8.1e-14 Score=107.83 Aligned_cols=114 Identities=20% Similarity=0.144 Sum_probs=76.6
Q ss_pred CCCCceecCCCccCCccChhhhccccCCeeeccCCC-CCCCCChhhhcCccC---------------hhhhcCCCCCCEE
Q 038318 6 TYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNS-LSGFLPSNIEKLKVL---------------VDCFGSLTSLEFL 69 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L---------------p~~~~~l~~L~~L 69 (220)
++|++|++++|++++..+..|.++++|++|++++|. +++..+..+..+++| +..|..+++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 379999999999996666689999999999999997 874444455444433 3445566666666
Q ss_pred eccCCcccccCCccccCCCCCC---eeeccCC-cccccCCCC-ccccccc-ccccccc
Q 038318 70 DISNNNLFGKIPKSFKGLSRLK---QLNAAHS-KLEEEIPIE-RPLRNIL-AQSFIWN 121 (220)
Q Consensus 70 ~ls~N~l~~~~p~~~~~l~~L~---~l~l~~n-~l~~~~p~~-~~~~~l~-~l~~~~n 121 (220)
++++|.+++ +|. +..+++|+ .|++++| ++++..+.. ..+++++ .+++++|
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n 166 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNN 166 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSC
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCC
Confidence 666666663 444 55556665 6666666 665443332 4556666 6666666
No 110
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.45 E-value=2.3e-13 Score=118.79 Aligned_cols=113 Identities=22% Similarity=0.311 Sum_probs=86.0
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC------------hhhhcCCCCCCEE
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL------------VDCFGSLTSLEFL 69 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L------------p~~~~~l~~L~~L 69 (220)
|..|++|+.|+|++|++++..| +..+++|+.|+|++|.+++ +| .+..+++| ...+..+++|+.|
T Consensus 61 l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L 136 (605)
T 1m9s_A 61 IQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISDINGLVHLPQLESL 136 (605)
T ss_dssp GGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCCGGGGGCTTCSEE
T ss_pred HccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCCccccCCCccCEE
Confidence 4567888888888888885443 7788888888888888873 44 56665555 4457788888888
Q ss_pred eccCCcccccCCccccCCCCCCeeeccCCcccccCCCCcccccccccccccc
Q 038318 70 DISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWN 121 (220)
Q Consensus 70 ~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n 121 (220)
++++|.+++. ..+..+++|+.|+|++|++++..| ...+++|+.|++++|
T Consensus 137 ~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N 185 (605)
T 1m9s_A 137 YLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKN 185 (605)
T ss_dssp ECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSS
T ss_pred ECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCC
Confidence 8888888754 567888888888888888887655 566778888888887
No 111
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.43 E-value=9e-15 Score=126.87 Aligned_cols=121 Identities=17% Similarity=0.161 Sum_probs=101.5
Q ss_pred CCCCCCCceecCCCccCCccChhhhccccCCeeeccCCC-------------CCCCCChhhhcCccC-------------
Q 038318 3 GSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNS-------------LSGFLPSNIEKLKVL------------- 56 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~-------------l~g~~p~~~~~l~~L------------- 56 (220)
..+++|+.|+|++|+++ .+|.+++++++|+.|++++|. +.+.+|..++.+++|
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~ 424 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD 424 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch
Confidence 56788999999999998 899999999999999987775 555666555544333
Q ss_pred --------------------------------hhhhcCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCCcccccC
Q 038318 57 --------------------------------VDCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEI 104 (220)
Q Consensus 57 --------------------------------p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~ 104 (220)
|. ++.+++|+.|++++|.++ .+|..++.+++|+.|++++|++++ +
T Consensus 425 L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-l 501 (567)
T 1dce_A 425 LRSKFLLENSVLKMEYADVRVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-V 501 (567)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-C
T ss_pred hhhhhhhcccccccCccCceEEEecCCCCCCCcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-C
Confidence 54 788899999999999999 889999999999999999999997 6
Q ss_pred CCCcccccccccccccccCCCCCC
Q 038318 105 PIERPLRNILAQSFIWNYTLCGPP 128 (220)
Q Consensus 105 p~~~~~~~l~~l~~~~n~~l~~~~ 128 (220)
|....+++|+.+++++| .+.+..
T Consensus 502 p~l~~l~~L~~L~Ls~N-~l~~~~ 524 (567)
T 1dce_A 502 DGVANLPRLQELLLCNN-RLQQSA 524 (567)
T ss_dssp GGGTTCSSCCEEECCSS-CCCSSS
T ss_pred cccCCCCCCcEEECCCC-CCCCCC
Confidence 74478999999999999 777653
No 112
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.42 E-value=3.1e-13 Score=106.31 Aligned_cols=115 Identities=21% Similarity=0.202 Sum_probs=90.9
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC-------------hhhhcCCCCCCE
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL-------------VDCFGSLTSLEF 68 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L-------------p~~~~~l~~L~~ 68 (220)
+..+++|++|++++|+++ .+| .+..+++|++|++++|++++ +|. +..+++| |. +.. ++|++
T Consensus 37 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~l~~-~~~-~~L~~ 110 (263)
T 1xeu_A 37 QKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKNLNG-IPS-ACLSR 110 (263)
T ss_dssp HHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSCCTT-CCC-SSCCE
T ss_pred hhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCCcCc-ccc-CcccE
Confidence 346789999999999998 677 78999999999999999994 454 7766666 32 223 78888
Q ss_pred EeccCCcccccCCccccCCCCCCeeeccCCcccccCCCCcccccccccccccccCCCC
Q 038318 69 LDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 69 L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n~~l~~ 126 (220)
|++++|.+++ ++ .+..+++|+.|++++|++++. +....+++|+.+++++| .+.+
T Consensus 111 L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~~l~~l~~L~~L~L~~N-~i~~ 164 (263)
T 1xeu_A 111 LFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-VMLGFLSKLEVLDLHGN-EITN 164 (263)
T ss_dssp EECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-GGGGGCTTCCEEECTTS-CCCB
T ss_pred EEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-hHHccCCCCCEEECCCC-cCcc
Confidence 8888888885 33 588899999999999999864 44467888999999988 4443
No 113
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.41 E-value=5.8e-14 Score=113.23 Aligned_cols=41 Identities=22% Similarity=0.153 Sum_probs=26.3
Q ss_pred CCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCC
Q 038318 5 LTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGF 45 (220)
Q Consensus 5 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 45 (220)
+++|++|+|++|++++..|..|..+++|++|++++|.+++.
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 73 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYET 73 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEE
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcc
Confidence 45666666666666655556666666666666666666543
No 114
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.37 E-value=1.8e-12 Score=105.45 Aligned_cols=115 Identities=23% Similarity=0.370 Sum_probs=84.2
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC-------------hhhhcCCCCCCE
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL-------------VDCFGSLTSLEF 68 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L-------------p~~~~~l~~L~~ 68 (220)
+..+++|++|++++|.++ .++. +..+++|+.|++++|.+++..+ +..+++| |. +..+++|++
T Consensus 173 ~~~l~~L~~L~l~~n~l~-~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~ 247 (347)
T 4fmz_A 173 IANLTDLYSLSLNYNQIE-DISP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-LANLSQLTW 247 (347)
T ss_dssp GGGCTTCSEEECTTSCCC-CCGG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCE
T ss_pred hccCCCCCEEEccCCccc-cccc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc-hhcCCCCCE
Confidence 456788888888888887 4444 7788888888888888874433 5555554 33 778888888
Q ss_pred EeccCCcccccCCccccCCCCCCeeeccCCcccccCCCCcccccccccccccccCCC
Q 038318 69 LDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWNYTLC 125 (220)
Q Consensus 69 L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n~~l~ 125 (220)
|++++|.+++ + +.+..+++|+.|++++|++++. +....+++++.+++++| .+.
T Consensus 248 L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n-~l~ 300 (347)
T 4fmz_A 248 LEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNN-QLG 300 (347)
T ss_dssp EECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSS-CCC
T ss_pred EECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCC-cCC
Confidence 8888888874 3 4577888888888888888753 44467778888888888 443
No 115
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.36 E-value=1.5e-12 Score=110.30 Aligned_cols=57 Identities=26% Similarity=0.286 Sum_probs=24.3
Q ss_pred CCCCCCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCCcccccccccccccc
Q 038318 62 SLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWN 121 (220)
Q Consensus 62 ~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n 121 (220)
.+++|+.|++++|.+++. ..+..+++|+.|++++|++++..| ...++.++.+++++|
T Consensus 329 ~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n 385 (466)
T 1o6v_A 329 SLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQ 385 (466)
T ss_dssp GCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG-GTTCTTCCEEECCCE
T ss_pred cCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch-hhcCCCCCEEeccCC
Confidence 334444444444444322 234444444444444444444333 233444444444444
No 116
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.35 E-value=1.8e-13 Score=110.86 Aligned_cols=118 Identities=18% Similarity=0.160 Sum_probs=67.9
Q ss_pred CCCCCCceecCCCccCCc-cChhhhccccCCeeeccCCCCCCCCChhhhcCccC----------------hhhhcCCCCC
Q 038318 4 SLTYLRTPHLGSNNLTSS-ISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL----------------VDCFGSLTSL 66 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L----------------p~~~~~l~~L 66 (220)
.+++|++|+|++|.+++. +|..+..+++|++|++++|.+++..|..++.+++| |..+..+++|
T Consensus 91 ~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L 170 (336)
T 2ast_B 91 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 170 (336)
T ss_dssp CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTC
T ss_pred cCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCC
Confidence 456666666666666644 55566666666666666666665555555554444 3345556666
Q ss_pred CEEeccCC-ccccc-CCccccCCC-CCCeeeccCC--ccc-ccCCCC-cccccccccccccc
Q 038318 67 EFLDISNN-NLFGK-IPKSFKGLS-RLKQLNAAHS--KLE-EEIPIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 67 ~~L~ls~N-~l~~~-~p~~~~~l~-~L~~l~l~~n--~l~-~~~p~~-~~~~~l~~l~~~~n 121 (220)
++|++++| .+++. ++..+..++ +|++|++++| .++ +.+|.. ..+++++.+++++|
T Consensus 171 ~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~ 232 (336)
T 2ast_B 171 DELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDS 232 (336)
T ss_dssp CEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTC
T ss_pred CEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCC
Confidence 66666666 66543 345555666 6666666666 333 222222 34556666666666
No 117
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.35 E-value=3.2e-12 Score=108.20 Aligned_cols=119 Identities=24% Similarity=0.288 Sum_probs=93.2
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC------------hhhhcCCCCCCEE
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL------------VDCFGSLTSLEFL 69 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L------------p~~~~~l~~L~~L 69 (220)
+..+++|++|++++|.+++..| +..+++|+.|++++|.+++. |. +..+++| ...+..+++|+.|
T Consensus 239 l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L 314 (466)
T 1o6v_A 239 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI-SP-LAGLTALTNLELNENQLEDISPISNLKNLTYL 314 (466)
T ss_dssp GGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCC-GG-GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEE
T ss_pred hhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcc-cc-ccCCCccCeEEcCCCcccCchhhcCCCCCCEE
Confidence 4567888888888888885544 78888888888888888843 33 5555555 2227889999999
Q ss_pred eccCCcccccCCccccCCCCCCeeeccCCcccccCCCCcccccccccccccccCCCCCC
Q 038318 70 DISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWNYTLCGPP 128 (220)
Q Consensus 70 ~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n~~l~~~~ 128 (220)
++++|++++..| +..+++|+.|++++|++++. +....+++++.+++++| .+.+..
T Consensus 315 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n-~l~~~~ 369 (466)
T 1o6v_A 315 TLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHN-QISDLT 369 (466)
T ss_dssp ECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSS-CCCBCG
T ss_pred ECcCCcCCCchh--hccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCC-ccCccc
Confidence 999999997655 78999999999999999875 44477889999999999 555443
No 118
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.33 E-value=1.2e-13 Score=111.89 Aligned_cols=121 Identities=19% Similarity=0.204 Sum_probs=85.8
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCC-CCCC-CCChhhhcCccC----------------hhhhcCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSN-SLSG-FLPSNIEKLKVL----------------VDCFGSL 63 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N-~l~g-~~p~~~~~l~~L----------------p~~~~~l 63 (220)
+..+++|++|+|++|.+++..|..+..+++|++|++++| .+++ .+|..+..+++| +..+..+
T Consensus 114 ~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l 193 (336)
T 2ast_B 114 LSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHV 193 (336)
T ss_dssp HTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHS
T ss_pred HhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhc
Confidence 356778888888888887777777888888888888888 5664 255555555554 4456677
Q ss_pred C-CCCEEeccCC--ccc-ccCCccccCCCCCCeeeccCCc-ccccCCCC-ccccccccccccccc
Q 038318 64 T-SLEFLDISNN--NLF-GKIPKSFKGLSRLKQLNAAHSK-LEEEIPIE-RPLRNILAQSFIWNY 122 (220)
Q Consensus 64 ~-~L~~L~ls~N--~l~-~~~p~~~~~l~~L~~l~l~~n~-l~~~~p~~-~~~~~l~~l~~~~n~ 122 (220)
+ +|++|++++| .++ +.+|..+..+++|+.|++++|. +++..+.. ..+++|+.+++++|.
T Consensus 194 ~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 194 SETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp CTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred ccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 7 8888888888 444 4556667777888888888887 55444444 566778888887774
No 119
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.33 E-value=1.6e-14 Score=108.85 Aligned_cols=103 Identities=22% Similarity=0.199 Sum_probs=59.6
Q ss_pred CCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCcc
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKS 83 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~ 83 (220)
.+++|++|+|++|++++ +| .+..+++|++|++++|.++ .+|. .+..+++|++|++++|.+++ +| .
T Consensus 46 ~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~----------~~~~~~~L~~L~L~~N~l~~-l~-~ 110 (198)
T 1ds9_A 46 TLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIEN----------LDAVADTLEELWISYNQIAS-LS-G 110 (198)
T ss_dssp HTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSS----------HHHHHHHCSEEEEEEEECCC-HH-H
T ss_pred cCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccc----------hhhcCCcCCEEECcCCcCCc-CC-c
Confidence 34555555555555553 44 5555555555555555555 4444 34445567777777777764 34 4
Q ss_pred ccCCCCCCeeeccCCcccccCC--CCcccccccccccccc
Q 038318 84 FKGLSRLKQLNAAHSKLEEEIP--IERPLRNILAQSFIWN 121 (220)
Q Consensus 84 ~~~l~~L~~l~l~~n~l~~~~p--~~~~~~~l~~l~~~~n 121 (220)
+..+++|+.|++++|++++..+ ....+++++.+++++|
T Consensus 111 ~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N 150 (198)
T 1ds9_A 111 IEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGN 150 (198)
T ss_dssp HHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSC
T ss_pred cccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCC
Confidence 6666677777777777664221 1145666677777766
No 120
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.30 E-value=1.4e-14 Score=109.08 Aligned_cols=107 Identities=15% Similarity=0.154 Sum_probs=92.8
Q ss_pred CCCCCCceecCCCccCCccCh------hhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCccc
Q 038318 4 SLTYLRTPHLGSNNLTSSISL------SLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLF 77 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~------~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~ 77 (220)
....++.++++.+.++|.+|. .+..+++|++|++++|.+++ +| . +..+++|+.|++++|.++
T Consensus 16 ~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~----------~~~l~~L~~L~l~~n~l~ 83 (198)
T 1ds9_A 16 ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-S----------LSGMENLRILSLGRNLIK 83 (198)
T ss_dssp HTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-C----------HHHHTTCCEEEEEEEEEC
T ss_pred hcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-c----------cccCCCCCEEECCCCCcc
Confidence 457889999999999999887 89999999999999999985 66 3 466789999999999998
Q ss_pred ccCCccccCCCCCCeeeccCCcccccCCCCcccccccccccccccCCC
Q 038318 78 GKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWNYTLC 125 (220)
Q Consensus 78 ~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n~~l~ 125 (220)
.+|..+..+++|+.|++++|++++ +|....+++++.+++++| .+.
T Consensus 84 -~l~~~~~~~~~L~~L~L~~N~l~~-l~~~~~l~~L~~L~l~~N-~i~ 128 (198)
T 1ds9_A 84 -KIENLDAVADTLEELWISYNQIAS-LSGIEKLVNLRVLYMSNN-KIT 128 (198)
T ss_dssp -SCSSHHHHHHHCSEEEEEEEECCC-HHHHHHHHHSSEEEESEE-ECC
T ss_pred -cccchhhcCCcCCEEECcCCcCCc-CCccccCCCCCEEECCCC-cCC
Confidence 788888888999999999999996 454467889999999999 444
No 121
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.29 E-value=1.1e-11 Score=104.91 Aligned_cols=69 Identities=26% Similarity=0.293 Sum_probs=47.6
Q ss_pred CCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC----------hhhhcCCCCCCEEeccCCc
Q 038318 6 TYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL----------VDCFGSLTSLEFLDISNNN 75 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L----------p~~~~~l~~L~~L~ls~N~ 75 (220)
++|++|++++|++++ +| +|+++++|++|++++|++++ +|..+.+++.| | .++.+++|++|++++|.
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~~~L~~L~L~~n~l~~l~-~~~~l~~L~~L~l~~N~ 206 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLPPSLEFIAAGNNQLEELP-ELQNLPFLTAIYADNNS 206 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCcccccEEECcCCcCCcCc-cccCCCCCCEEECCCCc
Confidence 477888888888874 67 58888888888888888873 66655555544 4 46666666666666666
Q ss_pred ccc
Q 038318 76 LFG 78 (220)
Q Consensus 76 l~~ 78 (220)
+++
T Consensus 207 l~~ 209 (454)
T 1jl5_A 207 LKK 209 (454)
T ss_dssp CSS
T ss_pred CCc
Confidence 653
No 122
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.28 E-value=3.2e-11 Score=102.06 Aligned_cols=40 Identities=23% Similarity=0.331 Sum_probs=28.2
Q ss_pred CCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCC
Q 038318 2 LGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSG 44 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 44 (220)
++++++|++|++++|++++ +| ++.+++|++|++++|.+++
T Consensus 102 ~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~ 141 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE 141 (457)
T ss_dssp CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC
T ss_pred cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce
Confidence 4567777777777777774 44 6677777777777777764
No 123
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.27 E-value=5.7e-13 Score=110.14 Aligned_cols=120 Identities=16% Similarity=0.146 Sum_probs=66.6
Q ss_pred CCCCCCCCceecCCC---ccCCccChhh-------hccccCCeeeccCCCCCC----CCChhhhcCccC-----------
Q 038318 2 LGSLTYLRTPHLGSN---NLTSSISLSL-------WNVECILYIDLSSNSLSG----FLPSNIEKLKVL----------- 56 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n---~l~g~~p~~~-------~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L----------- 56 (220)
|..+++|++|+|++| ++++.+|..+ ..+++|++|+|++|.+++ .+|..+..+++|
T Consensus 56 l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 135 (386)
T 2ca6_A 56 IASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG 135 (386)
T ss_dssp TTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCH
T ss_pred HHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCC
Confidence 455666666666663 3444555444 456666666666666664 255555555444
Q ss_pred -------hhhhcCC---------CCCCEEeccCCccc-ccCC---ccccCCCCCCeeeccCCccc--c---cCC-CCccc
Q 038318 57 -------VDCFGSL---------TSLEFLDISNNNLF-GKIP---KSFKGLSRLKQLNAAHSKLE--E---EIP-IERPL 110 (220)
Q Consensus 57 -------p~~~~~l---------~~L~~L~ls~N~l~-~~~p---~~~~~l~~L~~l~l~~n~l~--~---~~p-~~~~~ 110 (220)
+..+..+ ++|++|++++|.++ +.+| ..+..+++|++|++++|+++ | ..| ....+
T Consensus 136 ~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~ 215 (386)
T 2ca6_A 136 PQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYC 215 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGC
T ss_pred HHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcC
Confidence 1222223 66777777777665 3333 34555666666666666665 2 222 11455
Q ss_pred ccccccccccc
Q 038318 111 RNILAQSFIWN 121 (220)
Q Consensus 111 ~~l~~l~~~~n 121 (220)
++|+.+++++|
T Consensus 216 ~~L~~L~Ls~n 226 (386)
T 2ca6_A 216 QELKVLDLQDN 226 (386)
T ss_dssp TTCCEEECCSS
T ss_pred CCccEEECcCC
Confidence 56666666666
No 124
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.26 E-value=1.8e-11 Score=103.51 Aligned_cols=94 Identities=22% Similarity=0.198 Sum_probs=53.0
Q ss_pred CCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC-----------hhhhcCCCCCCEEec
Q 038318 3 GSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL-----------VDCFGSLTSLEFLDI 71 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L-----------p~~~~~l~~L~~L~l 71 (220)
+++++|++|++++|+..+.+ .+..+++|+.|++++|++++ +| ++.+++| -..++.+++|+.|++
T Consensus 145 ~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~~l~~l~~L~~L~L 219 (457)
T 3bz5_A 145 SHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKLDLNQNIQLTFLDC 219 (457)
T ss_dssp TTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCCCCTTCTTCSEEEC
T ss_pred ccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCeeccccCCCCCEEEC
Confidence 44555555555555444344 24455555555555555553 33 3333322 012556677777777
Q ss_pred cCCcccccCCccccCCCCCCeeeccCCcccccC
Q 038318 72 SNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEI 104 (220)
Q Consensus 72 s~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~ 104 (220)
++|++++ +| +..+++|+.|++++|++++..
T Consensus 220 s~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~ 249 (457)
T 3bz5_A 220 SSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD 249 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC
T ss_pred cCCcccc-cC--ccccCCCCEEEeeCCcCCCcC
Confidence 7777775 44 666777777777777776543
No 125
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.25 E-value=2.4e-12 Score=106.36 Aligned_cols=119 Identities=18% Similarity=0.141 Sum_probs=72.7
Q ss_pred CCCCCCCceecCCCccCC----ccChhhhccccCCeeeccCCCCCCCCChhhh----cC---------ccC---------
Q 038318 3 GSLTYLRTPHLGSNNLTS----SISLSLWNVECILYIDLSSNSLSGFLPSNIE----KL---------KVL--------- 56 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~----~l---------~~L--------- 56 (220)
..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++..+..+. .+ ++|
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR 170 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCC
Confidence 456777777777777775 3666677777777777777776532222222 11 333
Q ss_pred ------h---hhhcCCCCCCEEeccCCccc--c---cCCccccCCCCCCeeeccCCccc----ccCCCC-cccccccccc
Q 038318 57 ------V---DCFGSLTSLEFLDISNNNLF--G---KIPKSFKGLSRLKQLNAAHSKLE----EEIPIE-RPLRNILAQS 117 (220)
Q Consensus 57 ------p---~~~~~l~~L~~L~ls~N~l~--~---~~p~~~~~l~~L~~l~l~~n~l~----~~~p~~-~~~~~l~~l~ 117 (220)
| ..+..+++|++|++++|.++ | ..|..+..+++|+.|++++|.++ +.+|.. ..+++|+.++
T Consensus 171 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 2 35556677777777777766 2 23335666777777777777774 334433 4556677777
Q ss_pred cccc
Q 038318 118 FIWN 121 (220)
Q Consensus 118 ~~~n 121 (220)
+++|
T Consensus 251 L~~n 254 (386)
T 2ca6_A 251 LNDC 254 (386)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 7776
No 126
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.23 E-value=1.2e-11 Score=107.25 Aligned_cols=53 Identities=26% Similarity=0.246 Sum_probs=32.9
Q ss_pred CCCCEEeccCCcccccCCccccCCCCC-------CeeeccCCcccccCCCC-cccccccccccccc
Q 038318 64 TSLEFLDISNNNLFGKIPKSFKGLSRL-------KQLNAAHSKLEEEIPIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 64 ~~L~~L~ls~N~l~~~~p~~~~~l~~L-------~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n 121 (220)
++|+.|++++|.++ .+|. +.. +| +.|++++|+++ .+|.. ..++++..+++++|
T Consensus 180 ~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N 240 (571)
T 3cvr_A 180 ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDN 240 (571)
T ss_dssp TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSS
T ss_pred CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCC
Confidence 56666666666666 5555 443 45 77777777776 35554 55777777777777
No 127
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.22 E-value=1e-11 Score=101.35 Aligned_cols=115 Identities=15% Similarity=0.031 Sum_probs=80.8
Q ss_pred CCCCceecCCCccCCccC-hhhhccccCCeeeccCCCCCCCCCh-hhhcCccC---------------hhhhcCCCCCCE
Q 038318 6 TYLRTPHLGSNNLTSSIS-LSLWNVECILYIDLSSNSLSGFLPS-NIEKLKVL---------------VDCFGSLTSLEF 68 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L---------------p~~~~~l~~L~~ 68 (220)
+++++|+|++|+|+ .+| ..|.++++|++|+|++|++.+.+|. .|.+++++ |..|..+++|++
T Consensus 30 ~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~ 108 (350)
T 4ay9_X 30 RNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQY 108 (350)
T ss_dssp TTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCE
T ss_pred CCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccc
Confidence 47999999999999 565 5689999999999999999777775 45666554 678889999999
Q ss_pred EeccCCcccccCCccccCCC--------------------------CCCeeeccCCcccccCCCCcccccccccccccc
Q 038318 69 LDISNNNLFGKIPKSFKGLS--------------------------RLKQLNAAHSKLEEEIPIERPLRNILAQSFIWN 121 (220)
Q Consensus 69 L~ls~N~l~~~~p~~~~~l~--------------------------~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n 121 (220)
|++++|.+++..+..+.... .++.|++++|+++...+......++..+++.++
T Consensus 109 L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~ 187 (350)
T 4ay9_X 109 LLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDN 187 (350)
T ss_dssp EEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTC
T ss_pred ccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccC
Confidence 99999988754443332222 345566666666643332233445666666543
No 128
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.20 E-value=1.7e-11 Score=100.15 Aligned_cols=123 Identities=18% Similarity=0.191 Sum_probs=77.3
Q ss_pred CCCCCCCCCceecCCCccCCccCh-hhhccccCCe-eeccCCCCCCCCChhhhcCccC----------------------
Q 038318 1 MLGSLTYLRTPHLGSNNLTSSISL-SLWNVECILY-IDLSSNSLSGFLPSNIEKLKVL---------------------- 56 (220)
Q Consensus 1 ~l~~l~~L~~L~Ls~n~l~g~~p~-~~~~l~~L~~-L~Ls~N~l~g~~p~~~~~l~~L---------------------- 56 (220)
+|.+|++|++|+|++|++.+.+|. .|.++++++. +.++.|++++..|..+..+++|
T Consensus 49 ~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~ 128 (350)
T 4ay9_X 49 AFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSL 128 (350)
T ss_dssp SSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBS
T ss_pred HHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccc
Confidence 367888888888888887656654 3445555443 3444455553334444444443
Q ss_pred -----------------hhhhcCCC-CCCEEeccCCcccccCCccccCCCCCCeeeccC-CcccccCCCC--cccccccc
Q 038318 57 -----------------VDCFGSLT-SLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAH-SKLEEEIPIE--RPLRNILA 115 (220)
Q Consensus 57 -----------------p~~~~~l~-~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~-n~l~~~~p~~--~~~~~l~~ 115 (220)
+..|..+. .++.|++++|.++ .+|.......+|+.+++++ |.++ .+|.. ..+++|+.
T Consensus 129 ~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~ 206 (350)
T 4ay9_X 129 QKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVI 206 (350)
T ss_dssp SCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSE
T ss_pred hhhhhhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCccc-CCCHHHhccCcccch
Confidence 33445543 5778899999888 4554444556788888875 4444 56553 67788888
Q ss_pred cccccccCCCC
Q 038318 116 QSFIWNYTLCG 126 (220)
Q Consensus 116 l~~~~n~~l~~ 126 (220)
+++++| .+..
T Consensus 207 LdLs~N-~l~~ 216 (350)
T 4ay9_X 207 LDISRT-RIHS 216 (350)
T ss_dssp EECTTS-CCCC
T ss_pred hhcCCC-CcCc
Confidence 888888 5543
No 129
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.19 E-value=6.1e-11 Score=102.77 Aligned_cols=103 Identities=26% Similarity=0.330 Sum_probs=68.2
Q ss_pred CCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhh-cCccC----------hhhhcCCCCCCEEeccCC
Q 038318 6 TYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIE-KLKVL----------VDCFGSLTSLEFLDISNN 74 (220)
Q Consensus 6 ~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L----------p~~~~~l~~L~~L~ls~N 74 (220)
++|++|+|++|+++ .+| ..+++|++|++++|.+++ +|. ++ +++.| |. .+++|+.|++++|
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N 150 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPASLKHLDVDNNQLTMLPE---LPALLEYINADNN 150 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSS
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhcCCCEEECCCCcCCCCCC---cCccccEEeCCCC
Confidence 45777777777777 666 346777777777777774 666 44 23322 33 4567777777777
Q ss_pred cccccCCccccCCCCCCeeeccCCcccccCCCCcccccccccccccccCCC
Q 038318 75 NLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFIWNYTLC 125 (220)
Q Consensus 75 ~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~~n~~l~ 125 (220)
.+++ +|. .+++|+.|++++|++++ +|.. . ++|+.+++++| .+.
T Consensus 151 ~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~l-~-~~L~~L~Ls~N-~L~ 193 (571)
T 3cvr_A 151 QLTM-LPE---LPTSLEVLSVRNNQLTF-LPEL-P-ESLEALDVSTN-LLE 193 (571)
T ss_dssp CCSC-CCC---CCTTCCEEECCSSCCSC-CCCC-C-TTCCEEECCSS-CCS
T ss_pred ccCc-CCC---cCCCcCEEECCCCCCCC-cchh-h-CCCCEEECcCC-CCC
Confidence 7774 554 45677778888887775 5552 2 67788888887 444
No 130
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.16 E-value=8.5e-12 Score=102.33 Aligned_cols=38 Identities=26% Similarity=0.208 Sum_probs=17.3
Q ss_pred CCCceecCCCccCCccChhhhcc-----ccCCeeeccCCCCCC
Q 038318 7 YLRTPHLGSNNLTSSISLSLWNV-----ECILYIDLSSNSLSG 44 (220)
Q Consensus 7 ~L~~L~Ls~n~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~g 44 (220)
+|++|+|++|++++..+..+..+ ++|++|+|++|.+++
T Consensus 52 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 94 (362)
T 3goz_A 52 SVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSY 94 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGG
T ss_pred ceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCCh
Confidence 44444444444444334444333 444444444444443
No 131
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.16 E-value=1.1e-10 Score=98.60 Aligned_cols=33 Identities=18% Similarity=0.184 Sum_probs=14.9
Q ss_pred CCCceecCCCccCCccChhhhccccCCeeeccCCCCC
Q 038318 7 YLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLS 43 (220)
Q Consensus 7 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 43 (220)
+|++|++++|++++ +|.. +++|++|++++|+++
T Consensus 92 ~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~ 124 (454)
T 1jl5_A 92 HLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLK 124 (454)
T ss_dssp TCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS
T ss_pred CCCEEEccCCcCCc-cccc---cCCCcEEECCCCccC
Confidence 45555555555553 4432 133444444444443
No 132
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.13 E-value=1.9e-11 Score=100.29 Aligned_cols=118 Identities=20% Similarity=0.212 Sum_probs=76.7
Q ss_pred CCCCCCceecCCCccCCccC----hhhhccc-cCCeeeccCCCCCCCCChhhhcC-----ccC--------------hh-
Q 038318 4 SLTYLRTPHLGSNNLTSSIS----LSLWNVE-CILYIDLSSNSLSGFLPSNIEKL-----KVL--------------VD- 58 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p----~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l-----~~L--------------p~- 58 (220)
..++|++|+|++|++++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++| +.
T Consensus 20 ~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~ 99 (362)
T 3goz_A 20 IPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDE 99 (362)
T ss_dssp SCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHH
T ss_pred CCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHH
Confidence 34569999999999996666 6778888 89999999999987767666553 333 22
Q ss_pred ---hhcCC-CCCCEEeccCCcccccCCcccc----C-CCCCCeeeccCCcccccCCCC-----ccc-ccccccccccc
Q 038318 59 ---CFGSL-TSLEFLDISNNNLFGKIPKSFK----G-LSRLKQLNAAHSKLEEEIPIE-----RPL-RNILAQSFIWN 121 (220)
Q Consensus 59 ---~~~~l-~~L~~L~ls~N~l~~~~p~~~~----~-l~~L~~l~l~~n~l~~~~p~~-----~~~-~~l~~l~~~~n 121 (220)
.+..+ ++|++|++++|.+++..+..+. . .++|++|++++|++++..+.. ... .+++.+++++|
T Consensus 100 l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n 177 (362)
T 3goz_A 100 LVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGN 177 (362)
T ss_dssp HHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTS
T ss_pred HHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCC
Confidence 23344 6677777777776655444332 2 246777777777766422211 122 26777777776
No 133
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.12 E-value=4.6e-12 Score=106.69 Aligned_cols=111 Identities=16% Similarity=0.063 Sum_probs=55.0
Q ss_pred CCCCCceecCCCccCCc----cChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhc-CCCCCCEEeccCCccccc
Q 038318 5 LTYLRTPHLGSNNLTSS----ISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFG-SLTSLEFLDISNNNLFGK 79 (220)
Q Consensus 5 l~~L~~L~Ls~n~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~-~l~~L~~L~ls~N~l~~~ 79 (220)
+++|++|++++|+++.. +|..+..+++|++|++++|.+++..+..+.. .+. ..++|++|++++|.+++.
T Consensus 255 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~------~l~~~~~~L~~L~L~~n~l~~~ 328 (461)
T 1z7x_W 255 SSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE------TLLEPGCQLESLWVKSCSFTAA 328 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH------HHTSTTCCCCEEECTTSCCBGG
T ss_pred CCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH------HhccCCccceeeEcCCCCCchH
Confidence 44444455555444422 3444444455555555555443221211111 111 224677777777766644
Q ss_pred ----CCccccCCCCCCeeeccCCcccccCCCC-c-----ccccccccccccc
Q 038318 80 ----IPKSFKGLSRLKQLNAAHSKLEEEIPIE-R-----PLRNILAQSFIWN 121 (220)
Q Consensus 80 ----~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~-----~~~~l~~l~~~~n 121 (220)
++..+..+++|++|++++|++++..+.. . ..++++.+++++|
T Consensus 329 ~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n 380 (461)
T 1z7x_W 329 CCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADC 380 (461)
T ss_dssp GHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCC
Confidence 3445556667777777777666432221 0 1346666666666
No 134
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.12 E-value=2e-10 Score=100.52 Aligned_cols=56 Identities=23% Similarity=0.169 Sum_probs=37.5
Q ss_pred CCCCCCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC-ccccccccccccccc
Q 038318 62 SLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNY 122 (220)
Q Consensus 62 ~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~ 122 (220)
.+++|+.|++++|.++ .+|. .+++|+.|++++|+++ .+|.. ..+++++.+++++|+
T Consensus 239 ~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~ 295 (622)
T 3g06_A 239 LPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNP 295 (622)
T ss_dssp CCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCC
T ss_pred CCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCC
Confidence 3456666666666666 4454 4566777777777777 45654 667777888888873
No 135
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.01 E-value=9.2e-10 Score=96.36 Aligned_cols=84 Identities=27% Similarity=0.310 Sum_probs=49.8
Q ss_pred ccCCeeeccCCCCCCCCChhhhcCccC----------hhhhcCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCCc
Q 038318 30 ECILYIDLSSNSLSGFLPSNIEKLKVL----------VDCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSK 99 (220)
Q Consensus 30 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L----------p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~ 99 (220)
++|+.|++++|.++ .+|..+.++..| |. .+++|+.|++++|.+++ +| ..+++|+.|++++|+
T Consensus 181 ~~L~~L~Ls~N~l~-~l~~~~~~L~~L~L~~N~l~~l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~ 252 (622)
T 3g06_A 181 SGLQELSVSDNQLA-SLPTLPSELYKLWAYNNRLTSLPA---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNR 252 (622)
T ss_dssp TTCCEEECCSSCCS-CCCCCCTTCCEEECCSSCCSSCCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSC
T ss_pred CCCcEEECCCCCCC-CCCCccchhhEEECcCCcccccCC---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCC
Confidence 45555555555555 344433333332 21 23567777777777774 45 344677778888887
Q ss_pred ccccCCCCcccccccccccccccCCC
Q 038318 100 LEEEIPIERPLRNILAQSFIWNYTLC 125 (220)
Q Consensus 100 l~~~~p~~~~~~~l~~l~~~~n~~l~ 125 (220)
++ .+|. .++++..+++++| .+.
T Consensus 253 L~-~lp~--~~~~L~~L~Ls~N-~L~ 274 (622)
T 3g06_A 253 LT-SLPM--LPSGLLSLSVYRN-QLT 274 (622)
T ss_dssp CS-CCCC--CCTTCCEEECCSS-CCC
T ss_pred CC-cCCc--ccccCcEEeCCCC-CCC
Confidence 77 3554 5667788888887 444
No 136
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.93 E-value=1.1e-10 Score=98.15 Aligned_cols=113 Identities=18% Similarity=0.062 Sum_probs=82.2
Q ss_pred CCCCCCCceecCCCccCCccChhhhcc-----ccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCccc
Q 038318 3 GSLTYLRTPHLGSNNLTSSISLSLWNV-----ECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLF 77 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~ 77 (220)
..+++|++|+|++|.+++..+..+... ++|+.|++++|.+++.-...+ |..+..+++|++|++++|.++
T Consensus 281 ~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l------~~~l~~~~~L~~L~Ls~n~i~ 354 (461)
T 1z7x_W 281 RAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHF------SSVLAQNRFLLELQISNNRLE 354 (461)
T ss_dssp HHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH------HHHHHHCSSCCEEECCSSBCH
T ss_pred hhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHH------HHHHhhCCCccEEEccCCccc
Confidence 347899999999999986655555543 689999999999875422222 235667788888888888887
Q ss_pred ccCCccccC-----CCCCCeeeccCCcccc----cCCCC-cccccccccccccc
Q 038318 78 GKIPKSFKG-----LSRLKQLNAAHSKLEE----EIPIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 78 ~~~p~~~~~-----l~~L~~l~l~~n~l~~----~~p~~-~~~~~l~~l~~~~n 121 (220)
+..+..+.. .++|++|++++|++++ .+|.. ..+++++.+++++|
T Consensus 355 ~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N 408 (461)
T 1z7x_W 355 DAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNN 408 (461)
T ss_dssp HHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSS
T ss_pred cccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCC
Confidence 655544442 5688888888888875 45544 55778888888888
No 137
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.90 E-value=1.6e-09 Score=84.98 Aligned_cols=94 Identities=18% Similarity=0.238 Sum_probs=63.6
Q ss_pred eecCCCccCCccChh----hhccccCCeeeccCCCCCC--CCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCccc
Q 038318 11 PHLGSNNLTSSISLS----LWNVECILYIDLSSNSLSG--FLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPKSF 84 (220)
Q Consensus 11 L~Ls~n~l~g~~p~~----~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~~~ 84 (220)
++++.|+.. .++.. ..++++|+.|+|++|.+++ .+|. .+..+++|+.|+|++|++++. ..+
T Consensus 148 l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~----------~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 148 IDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSS----------IVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp CCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTT----------HHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred ccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchh----------HHhhCCCCCEEECCCCccCCc--hhh
Confidence 667777543 33332 2567889999999998886 3333 345678899999999988854 334
Q ss_pred cCCC--CCCeeeccCCcccccCCCC--------cccccccccc
Q 038318 85 KGLS--RLKQLNAAHSKLEEEIPIE--------RPLRNILAQS 117 (220)
Q Consensus 85 ~~l~--~L~~l~l~~n~l~~~~p~~--------~~~~~l~~l~ 117 (220)
..+. +|++|++++|.+++..|.. ..+++|..|+
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 4444 8889999999988766632 3455555554
No 138
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.85 E-value=6.9e-10 Score=87.06 Aligned_cols=81 Identities=22% Similarity=0.283 Sum_probs=48.2
Q ss_pred CCCCCCceecCCCccCC--ccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCC
Q 038318 4 SLTYLRTPHLGSNNLTS--SISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIP 81 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p 81 (220)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|++++. ..+.. +..+ +|++|++++|.+++.+|
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~-------l~~l-~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDK-------IKGL-KLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGG-------GTTS-CCSEEECTTSTTGGGCS
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhh-------cccC-CcceEEccCCcCccccC
Confidence 35667777777777765 4455566677777777777777633 22221 2233 67777777777766555
Q ss_pred c-------cccCCCCCCeee
Q 038318 82 K-------SFKGLSRLKQLN 94 (220)
Q Consensus 82 ~-------~~~~l~~L~~l~ 94 (220)
+ .+..+++|+.||
T Consensus 238 ~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 238 DQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp SHHHHHHHHHHHCTTCCEES
T ss_pred cchhHHHHHHHHCcccCeEC
Confidence 2 245566666655
No 139
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=98.76 E-value=6.2e-09 Score=83.35 Aligned_cols=46 Identities=26% Similarity=0.395 Sum_probs=40.1
Q ss_pred cccCHHHHHHHHHHHHHHHHHHhhC-----CCCceEeeCCCCCceeecCCC
Q 038318 175 RNRNISDMLNIMIDVALILEYVHHD-----HSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 175 ~~~~w~~r~~i~~~ia~~l~~lh~~-----~~~~i~h~dlk~~nill~~~~ 220 (220)
....|..+.+++.++|.|++|+|+. ..++|+|||+||+|||+|+++
T Consensus 95 ~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~ 145 (303)
T 3hmm_A 95 YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 145 (303)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCC
Confidence 3456999999999999999999986 356799999999999999764
No 140
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=98.72 E-value=8.6e-09 Score=82.61 Aligned_cols=42 Identities=24% Similarity=0.527 Sum_probs=38.2
Q ss_pred cccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 175 RNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 175 ~~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+-+|..+..++.++|.|++|||+.. |+|||+||+|||+|++
T Consensus 127 ~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~ 168 (307)
T 3omv_A 127 TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEG 168 (307)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCC
Confidence 34569999999999999999999876 9999999999999876
No 141
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.72 E-value=6.8e-10 Score=91.48 Aligned_cols=117 Identities=17% Similarity=0.153 Sum_probs=76.6
Q ss_pred CCCCCceecCCCccCCccChhh-hccccCCeeeccCCCCCCCCChhhh--------cCccC---------------hhhh
Q 038318 5 LTYLRTPHLGSNNLTSSISLSL-WNVECILYIDLSSNSLSGFLPSNIE--------KLKVL---------------VDCF 60 (220)
Q Consensus 5 l~~L~~L~Ls~n~l~g~~p~~~-~~l~~L~~L~Ls~N~l~g~~p~~~~--------~l~~L---------------p~~~ 60 (220)
.++|+.|+|++|.++..-...+ ..+++|+.|+|++|.++..-...+. .++.| +..+
T Consensus 100 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L 179 (372)
T 3un9_A 100 RHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGL 179 (372)
T ss_dssp SSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHH
T ss_pred CCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHH
Confidence 3578888888888874433333 3467788888888887643222221 12222 4455
Q ss_pred cCCCCCCEEeccCCccccc----CCccccCCCCCCeeeccCCcccccCCCC-----cccccccccccccc
Q 038318 61 GSLTSLEFLDISNNNLFGK----IPKSFKGLSRLKQLNAAHSKLEEEIPIE-----RPLRNILAQSFIWN 121 (220)
Q Consensus 61 ~~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~l~l~~n~l~~~~p~~-----~~~~~l~~l~~~~n 121 (220)
...++|++||+++|.++.. ++..+...++|+.|++++|+++..-... ...++++.+++++|
T Consensus 180 ~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N 249 (372)
T 3un9_A 180 AGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFN 249 (372)
T ss_dssp HTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTS
T ss_pred hcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCC
Confidence 7788888899988888642 2455667778889999988887432111 24477888888888
No 142
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.68 E-value=2.8e-09 Score=79.23 Aligned_cols=114 Identities=11% Similarity=0.167 Sum_probs=80.6
Q ss_pred CCCCCCCCceecCCC-ccCCc----cChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcc
Q 038318 2 LGSLTYLRTPHLGSN-NLTSS----ISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNL 76 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l 76 (220)
+...+.|++|+|++| .++.. +...+...++|++|+|++|.+...-...+ .+.+...++|++|++++|.+
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l------~~~L~~n~~L~~L~L~~N~i 105 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFAL------AEMLKVNNTLKSLNVESNFI 105 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHH------HHHHHHCSSCCEEECCSSCC
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHH------HHHHHhCCCcCEEECcCCcC
Confidence 356788999999999 88732 34556667899999999999863211112 12455667899999999999
Q ss_pred ccc----CCccccCCCCCCeeec--cCCcccccCCCC-----cccccccccccccc
Q 038318 77 FGK----IPKSFKGLSRLKQLNA--AHSKLEEEIPIE-----RPLRNILAQSFIWN 121 (220)
Q Consensus 77 ~~~----~p~~~~~l~~L~~l~l--~~n~l~~~~p~~-----~~~~~l~~l~~~~n 121 (220)
+.. +...+...++|++|++ ++|.+...-... ...+.++.+++++|
T Consensus 106 ~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n 161 (185)
T 1io0_A 106 SGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFT 161 (185)
T ss_dssp CHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCS
T ss_pred CHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCC
Confidence 753 3556777789999999 889887532111 23456777777766
No 143
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.68 E-value=2.9e-09 Score=92.31 Aligned_cols=121 Identities=10% Similarity=0.029 Sum_probs=80.6
Q ss_pred CCCCCCceecCCCccCCccChhhhc-cccCCeeecc----CCCCCCC-----CChhhhcCccC----------------h
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWN-VECILYIDLS----SNSLSGF-----LPSNIEKLKVL----------------V 57 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~-l~~L~~L~Ls----~N~l~g~-----~p~~~~~l~~L----------------p 57 (220)
.+++|++|+++.|++++..+..+.. +++|+.|+++ .|.+++. ++..+..+++| +
T Consensus 376 ~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~ 455 (592)
T 3ogk_B 376 GCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGL 455 (592)
T ss_dssp HCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHH
T ss_pred hCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHH
Confidence 3677777777777777766666665 7788888885 6666642 22223333333 2
Q ss_pred hhh-cCCCCCCEEeccCCcccc-cCCccccCCCCCCeeeccCCcccccC-CCC-cccccccccccccccCCC
Q 038318 58 DCF-GSLTSLEFLDISNNNLFG-KIPKSFKGLSRLKQLNAAHSKLEEEI-PIE-RPLRNILAQSFIWNYTLC 125 (220)
Q Consensus 58 ~~~-~~l~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~l~l~~n~l~~~~-p~~-~~~~~l~~l~~~~n~~l~ 125 (220)
..+ ..+++|++|++++|.+++ .++..+..+++|+.|++++|++++.. +.. ..+++++.+++++|. +.
T Consensus 456 ~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~-it 526 (592)
T 3ogk_B 456 SYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR-AS 526 (592)
T ss_dssp HHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB-CC
T ss_pred HHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc-CC
Confidence 222 247888999999888875 34455577888999999999876542 222 467788888988884 44
No 144
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.67 E-value=4e-08 Score=79.28 Aligned_cols=101 Identities=16% Similarity=0.111 Sum_probs=76.2
Q ss_pred CCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCC-EEeccCCcccccCCcc
Q 038318 5 LTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLE-FLDISNNNLFGKIPKS 83 (220)
Q Consensus 5 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~-~L~ls~N~l~~~~p~~ 83 (220)
+++|+.++|++|+++...+..|.++++|+.+++++| ++ .+++. +|.++++|+ .+++.+ .++...+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~---------aF~~~~~L~~~l~l~~-~l~~I~~~a 292 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LK-TIGQR---------VFSNCGRLAGTLELPA-SVTAIEFGA 292 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CC-EECTT---------TTTTCTTCCEEEEECT-TCCEECTTT
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cc-eehHH---------HhhCChhccEEEEEcc-cceEEchhh
Confidence 788999999999988444456888999999999988 65 56653 578888898 999988 676566788
Q ss_pred ccCCCCCCeeeccCCcccccCCCC-cccccccccc
Q 038318 84 FKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQS 117 (220)
Q Consensus 84 ~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~ 117 (220)
|.++++|+.++++.|+++..-+.. ...++|+.++
T Consensus 293 F~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 293 FMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp TTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred hhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 899999999999888888543333 4455555443
No 145
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=98.63 E-value=1.2e-08 Score=81.59 Aligned_cols=40 Identities=38% Similarity=0.515 Sum_probs=37.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-+|..+.+++.++|.|++|||+.. |+|||+||+|||++++
T Consensus 125 l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 125 LTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGEN 164 (299)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCC
Confidence 459999999999999999999877 9999999999999875
No 146
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=98.63 E-value=1.6e-08 Score=81.80 Aligned_cols=40 Identities=28% Similarity=0.456 Sum_probs=37.2
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
.|..+++++.++|.|++|||+.. |+|||+||+|||+|+++
T Consensus 156 ~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 156 GLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGL 195 (329)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTT
T ss_pred CHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCC
Confidence 49999999999999999999877 99999999999998763
No 147
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=98.61 E-value=1.4e-08 Score=81.42 Aligned_cols=39 Identities=28% Similarity=0.559 Sum_probs=36.7
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+|..+.+++.++|.|++|||+.. |+|||+||+|||+|++
T Consensus 143 ~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~ 181 (308)
T 4gt4_A 143 EPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDK 181 (308)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGG
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCC
Confidence 49999999999999999999887 9999999999999875
No 148
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.58 E-value=9.4e-09 Score=84.63 Aligned_cols=92 Identities=15% Similarity=0.122 Sum_probs=61.0
Q ss_pred CCCCCceecCCCccCC----ccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCccccc-
Q 038318 5 LTYLRTPHLGSNNLTS----SISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGK- 79 (220)
Q Consensus 5 l~~L~~L~Ls~n~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~- 79 (220)
.++|++|+|++|.++. .++..+..+++|++|+|++|.++..-...+ +..+...++|+.|++++|.++..
T Consensus 154 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L------~~~L~~~~~L~~L~Ls~N~i~~~g 227 (372)
T 3un9_A 154 QCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELL------AAQLDRNRQLQELNVAYNGAGDTA 227 (372)
T ss_dssp TCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHH------HHHGGGCSCCCEEECCSSCCCHHH
T ss_pred CCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHH------HHHHhcCCCcCeEECCCCCCCHHH
Confidence 4566666666666652 233444556667777777776642111111 33567778999999999999853
Q ss_pred ---CCccccCCCCCCeeeccCCcccc
Q 038318 80 ---IPKSFKGLSRLKQLNAAHSKLEE 102 (220)
Q Consensus 80 ---~p~~~~~l~~L~~l~l~~n~l~~ 102 (220)
++..+...++|++|++++|.++.
T Consensus 228 ~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 228 ALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 33445567899999999999875
No 149
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.57 E-value=1.1e-07 Score=76.81 Aligned_cols=114 Identities=13% Similarity=0.106 Sum_probs=77.9
Q ss_pred CCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC---hhh----------------------
Q 038318 5 LTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL---VDC---------------------- 59 (220)
Q Consensus 5 l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L---p~~---------------------- 59 (220)
+++|+.|+|.+ +++..-+..|.++++|+.+++++|.+...-+..|..+.++ |..
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 89999999999 8884445678899999999999998753323333333222 100
Q ss_pred ------------------------------------------h-cCCCCCCEEeccCCcccccCCccccCCCCCCeeecc
Q 038318 60 ------------------------------------------F-GSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAA 96 (220)
Q Consensus 60 ------------------------------------------~-~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~ 96 (220)
+ ..+++|+.+++++|+++...+..|.++.+|+.+++.
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 0 026789999999988886666678888899999998
Q ss_pred CCcccccCCCC--ccccccc-ccccccc
Q 038318 97 HSKLEEEIPIE--RPLRNIL-AQSFIWN 121 (220)
Q Consensus 97 ~n~l~~~~p~~--~~~~~l~-~l~~~~n 121 (220)
+| +.. ++.. ..+.+|+ .+++..+
T Consensus 259 ~n-i~~-I~~~aF~~~~~L~~~l~l~~~ 284 (329)
T 3sb4_A 259 HN-LKT-IGQRVFSNCGRLAGTLELPAS 284 (329)
T ss_dssp TT-CCE-ECTTTTTTCTTCCEEEEECTT
T ss_pred cc-cce-ehHHHhhCChhccEEEEEccc
Confidence 87 553 4443 5566676 6666543
No 150
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.54 E-value=6.4e-08 Score=83.82 Aligned_cols=85 Identities=9% Similarity=0.169 Sum_probs=47.5
Q ss_pred CCCCCCceecCCCccCCc----cChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCccccc
Q 038318 4 SLTYLRTPHLGSNNLTSS----ISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGK 79 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~ 79 (220)
.+++|++|+|++|.+++. ++..+..+++|+.|++++|.+++.-+..+. ..+..+++|+.|++++|.+++
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~------~~~~~~~~L~~L~L~~~~~~~- 234 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLE------TIARNCRSLVSVKVGDFEILE- 234 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHH------HHHHHCTTCCEEECSSCBGGG-
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHH------HHHhhCCCCcEEeccCccHHH-
Confidence 467888888888887655 444556778888888888877632222221 123344555555555554442
Q ss_pred CCccccCCCCCCeeec
Q 038318 80 IPKSFKGLSRLKQLNA 95 (220)
Q Consensus 80 ~p~~~~~l~~L~~l~l 95 (220)
+|..+..+++|+.|++
T Consensus 235 l~~~~~~~~~L~~L~l 250 (592)
T 3ogk_B 235 LVGFFKAAANLEEFCG 250 (592)
T ss_dssp GHHHHHHCTTCCEEEE
T ss_pred HHHHHhhhhHHHhhcc
Confidence 3333333333333333
No 151
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=98.54 E-value=6.4e-08 Score=76.93 Aligned_cols=42 Identities=26% Similarity=0.350 Sum_probs=37.1
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
.-.+.....++.+++.|++|+|+. .++|+|||+||+|||++.
T Consensus 125 ~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~ 166 (290)
T 3fpq_A 125 VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITG 166 (290)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEEC
Confidence 345888899999999999999987 578999999999999974
No 152
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=98.53 E-value=8.8e-08 Score=77.61 Aligned_cols=42 Identities=26% Similarity=0.370 Sum_probs=37.5
Q ss_pred cccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 175 RNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 175 ~~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..-.+.....++.+++.||+|+|... |+||||||+|||++.+
T Consensus 145 ~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~ 186 (336)
T 4g3f_A 145 GCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSD 186 (336)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCC
Confidence 33458888999999999999999887 9999999999999875
No 153
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=98.50 E-value=4.2e-08 Score=80.16 Aligned_cols=39 Identities=26% Similarity=0.455 Sum_probs=36.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+|..+..++.++|.|++|+|+.. |+|||+||+|||++++
T Consensus 183 ~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~ 221 (353)
T 4ase_A 183 TLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEK 221 (353)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGG
T ss_pred CHHHHHHHHHHHHHHHHhHhhCC---eecCccCccceeeCCC
Confidence 48899999999999999999987 9999999999999875
No 154
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=98.47 E-value=8.8e-08 Score=76.49 Aligned_cols=40 Identities=33% Similarity=0.556 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
+|.....++.+++.|++|+|+.. |+|||+||+|||++.++
T Consensus 116 ~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~ 155 (299)
T 4g31_A 116 ERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDD 155 (299)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCC
Confidence 36667889999999999999987 99999999999998763
No 155
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=98.45 E-value=1.4e-07 Score=76.75 Aligned_cols=41 Identities=24% Similarity=0.413 Sum_probs=37.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
-.+.....++.+++.||+|+|... |+||||||+|||++.++
T Consensus 167 l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g 207 (346)
T 4fih_A 167 MNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDG 207 (346)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCC
Confidence 447788899999999999999988 99999999999998763
No 156
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=98.44 E-value=2.1e-07 Score=75.75 Aligned_cols=40 Identities=25% Similarity=0.537 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
.+.....++.+++.|++|+|... |+||||||+|||+++++
T Consensus 123 ~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g 162 (350)
T 4b9d_A 123 QEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDG 162 (350)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCC
Confidence 46677889999999999999987 99999999999998764
No 157
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=98.44 E-value=2.3e-07 Score=73.13 Aligned_cols=43 Identities=30% Similarity=0.595 Sum_probs=37.6
Q ss_pred cccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 175 RNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 175 ~~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
.+-.......++.+++.|++|+|+.. |+|||+||+||++++++
T Consensus 107 ~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~ 149 (275)
T 3hyh_A 107 DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHL 149 (275)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCC
Confidence 34457788899999999999999988 99999999999998763
No 158
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.44 E-value=1.5e-08 Score=87.69 Aligned_cols=116 Identities=14% Similarity=0.149 Sum_probs=68.0
Q ss_pred CCCCCceecCCCccCCccChhhh-ccccCCeeecc--C----CCCCCCCCh------hhhcCccC-------------hh
Q 038318 5 LTYLRTPHLGSNNLTSSISLSLW-NVECILYIDLS--S----NSLSGFLPS------NIEKLKVL-------------VD 58 (220)
Q Consensus 5 l~~L~~L~Ls~n~l~g~~p~~~~-~l~~L~~L~Ls--~----N~l~g~~p~------~~~~l~~L-------------p~ 58 (220)
+++|++|+++.|++++..+..+. .+++|+.|+++ + |.++ ..|. .+..+++| +.
T Consensus 371 ~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~-~~~~~~~~~~l~~~~~~L~~L~L~~~l~~~~~~ 449 (594)
T 2p1m_B 371 CPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLT-LEPLDIGFGAIVEHCKDLRRLSLSGLLTDKVFE 449 (594)
T ss_dssp CTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTT-CCCTHHHHHHHHHHCTTCCEEECCSSCCHHHHH
T ss_pred chhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCccccc-CCchhhHHHHHHhhCCCccEEeecCcccHHHHH
Confidence 56677777777777655555554 47778888887 3 4444 2221 12223332 22
Q ss_pred hhcC-CCCCCEEeccCCcccccCCccc-cCCCCCCeeeccCCcccccCCC-C-cccccccccccccc
Q 038318 59 CFGS-LTSLEFLDISNNNLFGKIPKSF-KGLSRLKQLNAAHSKLEEEIPI-E-RPLRNILAQSFIWN 121 (220)
Q Consensus 59 ~~~~-l~~L~~L~ls~N~l~~~~p~~~-~~l~~L~~l~l~~n~l~~~~p~-~-~~~~~l~~l~~~~n 121 (220)
.+.. +++|+.|++++|.+++..+..+ ..+++|+.|++++|.+++.... . ..+++|+.+++++|
T Consensus 450 ~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~ 516 (594)
T 2p1m_B 450 YIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSC 516 (594)
T ss_dssp HHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESS
T ss_pred HHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCC
Confidence 3333 6677777777777765444444 4567777777777777533222 1 34667777777776
No 159
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=98.42 E-value=2.5e-07 Score=74.18 Aligned_cols=41 Identities=34% Similarity=0.562 Sum_probs=36.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
-.......++.+++.|++|+|... |+|||+||+|||+++++
T Consensus 129 l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g 169 (311)
T 4aw0_A 129 FDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDM 169 (311)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCC
Confidence 335667789999999999999988 99999999999998763
No 160
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=98.39 E-value=3e-07 Score=76.67 Aligned_cols=39 Identities=23% Similarity=0.416 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
+.....++.+++.||+|||... |+||||||+|||++.++
T Consensus 246 e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g 284 (423)
T 4fie_A 246 EEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDG 284 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCC
Confidence 6777889999999999999988 99999999999998764
No 161
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=98.38 E-value=2.2e-07 Score=74.31 Aligned_cols=41 Identities=34% Similarity=0.470 Sum_probs=36.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
-.......++.+++.|++|+|+.. |+|||+||+|||+++++
T Consensus 123 l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g 163 (304)
T 3ubd_A 123 FTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEG 163 (304)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCC
Confidence 346778889999999999999988 99999999999998763
No 162
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.38 E-value=6e-08 Score=71.96 Aligned_cols=94 Identities=19% Similarity=0.160 Sum_probs=70.1
Q ss_pred CCCCCCCCceecCCCccCCc----cChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEec--cCCc
Q 038318 2 LGSLTYLRTPHLGSNNLTSS----ISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDI--SNNN 75 (220)
Q Consensus 2 l~~l~~L~~L~Ls~n~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~l--s~N~ 75 (220)
+...++|++|+|++|+++.. +...+...++|++|+|++|.++..--..+ .+.+...++|++|++ ++|.
T Consensus 61 L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l------~~~L~~n~~L~~L~L~~~~N~ 134 (185)
T 1io0_A 61 LKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL------VEALQSNTSLIELRIDNQSQP 134 (185)
T ss_dssp HTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH------HHGGGGCSSCCEEECCCCSSC
T ss_pred HHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHH------HHHHHhCCCceEEEecCCCCC
Confidence 34568899999999999743 34556667899999999999873211111 125667789999999 8899
Q ss_pred cccc----CCccccCCCCCCeeeccCCccc
Q 038318 76 LFGK----IPKSFKGLSRLKQLNAAHSKLE 101 (220)
Q Consensus 76 l~~~----~p~~~~~l~~L~~l~l~~n~l~ 101 (220)
++.. +...+...++|++|++++|.+.
T Consensus 135 i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 135 LGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp CCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred CCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 9754 2344556689999999999886
No 163
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.30 E-value=9e-08 Score=82.87 Aligned_cols=63 Identities=11% Similarity=0.036 Sum_probs=40.6
Q ss_pred hhcCCCCCCEEeccCCcccccCCcccc----CCCCCCeeeccCCc--cccc-CCCC-cccccccccccccc
Q 038318 59 CFGSLTSLEFLDISNNNLFGKIPKSFK----GLSRLKQLNAAHSK--LEEE-IPIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 59 ~~~~l~~L~~L~ls~N~l~~~~p~~~~----~l~~L~~l~l~~n~--l~~~-~p~~-~~~~~l~~l~~~~n 121 (220)
.+..+++|++|++++|.+++..+..+. .+++|+.|++++|. +... ++.. ..+++|+.+++++|
T Consensus 151 ~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 151 IAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp HHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred HHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 344688899999998888765554443 55688888888886 2111 0000 23467777777766
No 164
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=98.30 E-value=6.1e-07 Score=74.44 Aligned_cols=44 Identities=27% Similarity=0.535 Sum_probs=38.2
Q ss_pred ccccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 174 CRNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 174 ~~~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
++.-.+.....++.+++.||.|+|... |+||||||+|||++.++
T Consensus 152 ~~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~ 195 (398)
T 4b99_A 152 SQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENC 195 (398)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCC
Confidence 334457788899999999999999988 99999999999998763
No 165
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.29 E-value=3.4e-06 Score=69.97 Aligned_cols=94 Identities=15% Similarity=0.123 Sum_probs=51.6
Q ss_pred CCCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccC------------------------
Q 038318 1 MLGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVL------------------------ 56 (220)
Q Consensus 1 ~l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L------------------------ 56 (220)
+|.++++|+.++|++|+++ .+|.......+|+.+.+..+ ++..-...|..+++|
T Consensus 175 aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~l~~I~~~aF~~~~L~~ 252 (401)
T 4fdw_A 175 IFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPENVSTIGQEAFRESGITT 252 (401)
T ss_dssp TTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTTCCEECTTTTTTCCCSE
T ss_pred HhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCCccCccccccccCCccE
Confidence 4677888888888888776 45443333455555555533 331112223333322
Q ss_pred -----------hhhhcCCCCCCEEeccCCccc-----ccCCccccCCCCCCeeecc
Q 038318 57 -----------VDCFGSLTSLEFLDISNNNLF-----GKIPKSFKGLSRLKQLNAA 96 (220)
Q Consensus 57 -----------p~~~~~l~~L~~L~ls~N~l~-----~~~p~~~~~l~~L~~l~l~ 96 (220)
+.+|..+++|+.+++.+|.+. ...+..|.++++|+.+++.
T Consensus 253 i~lp~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~ 308 (401)
T 4fdw_A 253 VKLPNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP 308 (401)
T ss_dssp EEEETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC
T ss_pred EEeCCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC
Confidence 345556666666666665543 2334455566666666665
No 166
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=98.24 E-value=7.3e-07 Score=73.02 Aligned_cols=38 Identities=26% Similarity=0.489 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
......++.+++.|++|+|+.. |+|||+||+|||++.+
T Consensus 116 ~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~ 153 (361)
T 4f9c_A 116 FQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRR 153 (361)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETT
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCC
Confidence 6677889999999999999988 9999999999999764
No 167
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.21 E-value=7.4e-07 Score=77.29 Aligned_cols=35 Identities=20% Similarity=0.303 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 183 LNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 183 ~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
.+|+.+++.||+|+|... |+||||||+|||+++++
T Consensus 342 ~~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg 376 (569)
T 4azs_A 342 EKILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQ 376 (569)
T ss_dssp HHHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTS
T ss_pred HHHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCC
Confidence 368999999999999998 99999999999998764
No 168
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=98.21 E-value=1.1e-06 Score=73.21 Aligned_cols=39 Identities=28% Similarity=0.474 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
|..+..++.+++.|++|||... |+|||+||+||+++.++
T Consensus 210 ~~~~~~i~~qi~~aL~~LH~~~---iiHrDiKp~NILl~~~~ 248 (413)
T 3dzo_A 210 HHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRG 248 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---cccCCcccceEEEecCC
Confidence 7788999999999999999887 99999999999998763
No 169
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=98.18 E-value=1.6e-06 Score=76.20 Aligned_cols=39 Identities=41% Similarity=0.502 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
......++.+++.||+|+|... |+||||||+|||+|+++
T Consensus 291 E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G 329 (689)
T 3v5w_A 291 EADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHG 329 (689)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCC
Confidence 5566788999999999999887 99999999999999764
No 170
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=98.18 E-value=1.4e-06 Score=71.46 Aligned_cols=38 Identities=29% Similarity=0.517 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
|..+..++.+++.|++|+|... ++|||+||+||+++++
T Consensus 205 ~~~~~~i~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~ 242 (377)
T 3byv_A 205 HHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQR 242 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTT
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCC
Confidence 6778899999999999999987 9999999999999875
No 171
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=98.13 E-value=1.8e-06 Score=70.48 Aligned_cols=39 Identities=23% Similarity=0.499 Sum_probs=36.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
-.|..+..++.+++.|++|+|... |+|||+||+||+++.
T Consensus 169 l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~ 207 (365)
T 3e7e_A 169 MPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGN 207 (365)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECG
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecc
Confidence 348889999999999999999877 999999999999976
No 172
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=98.13 E-value=2.4e-06 Score=68.37 Aligned_cols=43 Identities=30% Similarity=0.447 Sum_probs=38.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.|..+..++.+++.|+.|+|..+.++++|||+||+||+++++
T Consensus 128 ~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~ 170 (326)
T 3uim_A 128 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE 170 (326)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCC
Confidence 4488999999999999999999856669999999999999876
No 173
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=98.12 E-value=1.6e-06 Score=69.18 Aligned_cols=40 Identities=28% Similarity=0.443 Sum_probs=36.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.|..+..++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 154 l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~ 193 (311)
T 3p1a_A 154 LPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPR 193 (311)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCC
Confidence 458899999999999999999987 9999999999999764
No 174
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=98.07 E-value=4.1e-06 Score=66.62 Aligned_cols=41 Identities=29% Similarity=0.449 Sum_probs=37.5
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...|..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 104 ~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~ 144 (310)
T 3s95_A 104 QYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVREN 144 (310)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCC
Confidence 3458899999999999999999987 9999999999999875
No 175
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=98.07 E-value=3.2e-06 Score=69.25 Aligned_cols=40 Identities=28% Similarity=0.483 Sum_probs=36.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
.|.....++.+++.|++|||... ++|||+||+||++++++
T Consensus 201 ~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~ 240 (370)
T 2psq_A 201 TFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENN 240 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTC
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEECCCC
Confidence 47888999999999999999987 99999999999998763
No 176
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=98.05 E-value=3.5e-06 Score=68.71 Aligned_cols=39 Identities=31% Similarity=0.580 Sum_probs=36.1
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
.-.|..+..++.+++.|+.|||... ++|||+||+||+++
T Consensus 148 ~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~ 186 (364)
T 3op5_A 148 RFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLN 186 (364)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEe
Confidence 3458899999999999999999987 99999999999998
No 177
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=98.04 E-value=3.9e-06 Score=68.62 Aligned_cols=35 Identities=17% Similarity=0.300 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 183 LNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 183 ~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
..++.+++.|++|||... ++|||+||+||++++++
T Consensus 197 ~~i~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~ 231 (371)
T 3q60_A 197 HILTAQLIRLAANLQSKG---LVHGHFTPDNLFIMPDG 231 (371)
T ss_dssp HHHHHHHHHHHHHHHHTT---EEETTCSGGGEEECTTS
T ss_pred HHHHHHHHHHHHHHHHCC---CccCcCCHHHEEECCCC
Confidence 788899999999999887 99999999999998763
No 178
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=98.04 E-value=3.2e-06 Score=66.72 Aligned_cols=45 Identities=29% Similarity=0.423 Sum_probs=37.4
Q ss_pred cccCHHHHHHHHHHHHHHHHHHhhCC-----CCceEeeCCCCCceeecCC
Q 038318 175 RNRNISDMLNIMIDVALILEYVHHDH-----STLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 175 ~~~~w~~r~~i~~~ia~~l~~lh~~~-----~~~i~h~dlk~~nill~~~ 219 (220)
..-.|..+..++.+++.|+.|+|... ..+++|||+||+||+++.+
T Consensus 100 ~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~ 149 (301)
T 3q4u_A 100 TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN 149 (301)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTT
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCC
Confidence 34558899999999999999999321 3459999999999999865
No 179
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=98.04 E-value=2.9e-06 Score=68.16 Aligned_cols=41 Identities=27% Similarity=0.443 Sum_probs=37.0
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.|..+..++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 113 ~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~ 153 (327)
T 3poz_A 113 NIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTP 153 (327)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEET
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCC
Confidence 3458889999999999999999987 9999999999999865
No 180
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=98.04 E-value=3.9e-06 Score=68.40 Aligned_cols=40 Identities=23% Similarity=0.340 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|++|||... |+|||+||+||+++.+
T Consensus 121 ~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~ 160 (353)
T 3txo_A 121 FDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHE 160 (353)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCC
Confidence 447788899999999999999987 9999999999999875
No 181
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=98.03 E-value=4.5e-06 Score=66.70 Aligned_cols=39 Identities=33% Similarity=0.593 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~ 200 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMD 200 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTT
T ss_pred hhHHHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCC
Confidence 36678899999999999999887 9999999999999865
No 182
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=98.02 E-value=2.1e-06 Score=69.13 Aligned_cols=39 Identities=18% Similarity=0.270 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHHHHHHHh-hCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVH-HDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh-~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|++|+| ... |+|||+||+||+++.+
T Consensus 159 ~~~~~~~i~~qi~~aL~~lH~~~~---ivHrDlKp~NILl~~~ 198 (336)
T 2vuw_A 159 SLATAKSILHQLTASLAVAEASLR---FEHRDLHWGNVLLKKT 198 (336)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHC---CBCSCCCGGGEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCC---EeECCCCHHHEEEecc
Confidence 47888999999999999999 777 9999999999999864
No 183
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=98.02 E-value=5.7e-06 Score=66.16 Aligned_cols=40 Identities=40% Similarity=0.548 Sum_probs=36.8
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 136 ~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~ 175 (321)
T 2qkw_B 136 MSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDEN 175 (321)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTT
T ss_pred cCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCC
Confidence 348899999999999999999987 9999999999999875
No 184
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=98.02 E-value=3.7e-06 Score=67.58 Aligned_cols=42 Identities=33% Similarity=0.579 Sum_probs=37.6
Q ss_pred cccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 175 RNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 175 ~~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+.-.+..+..++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 100 ~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~ 141 (330)
T 2izr_A 100 RTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRP 141 (330)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCG
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccC
Confidence 34458899999999999999999987 9999999999999864
No 185
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=98.01 E-value=4.6e-06 Score=66.98 Aligned_cols=43 Identities=21% Similarity=0.361 Sum_probs=37.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCC------CCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDH------STLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~------~~~i~h~dlk~~nill~~~ 219 (220)
..|.....++.+++.|+.|+|... .+.++|||+||+||+++.+
T Consensus 108 ~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~ 156 (336)
T 3g2f_A 108 SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKND 156 (336)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTT
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCC
Confidence 358889999999999999999871 2259999999999999875
No 186
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=98.01 E-value=4.3e-06 Score=67.07 Aligned_cols=41 Identities=24% Similarity=0.327 Sum_probs=36.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...|.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 111 ~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~ 151 (325)
T 3kex_A 111 ALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSP 151 (325)
T ss_dssp GSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCC
Confidence 3447789999999999999999987 9999999999999865
No 187
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=98.00 E-value=4.8e-06 Score=68.99 Aligned_cols=42 Identities=26% Similarity=0.378 Sum_probs=37.2
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
.-.+.....++.+++.|++|||... |+|||+||+||+++.++
T Consensus 149 ~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g 190 (396)
T 4dc2_A 149 KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEG 190 (396)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCC
Confidence 3447788899999999999999987 99999999999998763
No 188
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=98.00 E-value=5.4e-06 Score=65.32 Aligned_cols=40 Identities=23% Similarity=0.350 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+..+..++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 103 ~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~ 142 (298)
T 1csn_A 103 FSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRP 142 (298)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccC
Confidence 458889999999999999999887 9999999999999764
No 189
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=98.00 E-value=7.1e-06 Score=72.55 Aligned_cols=39 Identities=21% Similarity=0.324 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
+.....++.+++.||+|||... |+||||||+||++|+++
T Consensus 441 ~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g 479 (674)
T 3pfq_A 441 EPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEG 479 (674)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSS
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCC
Confidence 6778889999999999999987 99999999999998763
No 190
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.99 E-value=1.7e-06 Score=70.86 Aligned_cols=107 Identities=15% Similarity=0.086 Sum_probs=53.2
Q ss_pred CCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccC--Cccccc--
Q 038318 4 SLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISN--NNLFGK-- 79 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~--N~l~~~-- 79 (220)
.+|+|+.|+|++|.-. .+|. + .+++|+.|++..+.++......+. ...+++|+.|+|+. |...+.
T Consensus 170 ~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~--------~~~lp~L~~L~L~~~~~~~~~~~~ 238 (362)
T 2ra8_A 170 AMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDIL--------GSDLPNLEKLVLYVGVEDYGFDGD 238 (362)
T ss_dssp TCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHH--------HSBCTTCCEEEEECBCGGGTCCSC
T ss_pred cCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHH--------HccCCCCcEEEEeccccccccchh
Confidence 4678888888877311 2333 3 367788888877665422111110 12456666666542 221111
Q ss_pred ---CCccc--cCCCCCCeeeccCCcccccCCCC----cccccccccccccc
Q 038318 80 ---IPKSF--KGLSRLKQLNAAHSKLEEEIPIE----RPLRNILAQSFIWN 121 (220)
Q Consensus 80 ---~p~~~--~~l~~L~~l~l~~n~l~~~~p~~----~~~~~l~~l~~~~n 121 (220)
+...+ ..+++|++|++++|.+.+..+.. ..+++|+.|+++.|
T Consensus 239 ~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n 289 (362)
T 2ra8_A 239 MNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAG 289 (362)
T ss_dssp GGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSS
T ss_pred HHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCC
Confidence 00111 13456666666666655322111 23556666666655
No 191
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=97.99 E-value=5.8e-06 Score=69.54 Aligned_cols=40 Identities=25% Similarity=0.512 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.||.|||... |+|||+||+|||++.+
T Consensus 153 l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~ 192 (458)
T 3rp9_A 153 LTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQD 192 (458)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCC
Confidence 457788999999999999999987 9999999999999876
No 192
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=97.98 E-value=5.5e-06 Score=65.79 Aligned_cols=40 Identities=30% Similarity=0.532 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 117 ~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~ 156 (308)
T 3g33_A 117 LPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSG 156 (308)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCC
Confidence 458889999999999999999988 9999999999999765
No 193
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=97.97 E-value=6.1e-06 Score=67.26 Aligned_cols=41 Identities=20% Similarity=0.320 Sum_probs=36.7
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+-.+.....++.+++.|++|||... ++|||+||+||+++.+
T Consensus 117 ~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~ 157 (353)
T 2i0e_A 117 RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSE 157 (353)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCC
Confidence 3447788899999999999999987 9999999999999875
No 194
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=97.97 E-value=6.2e-06 Score=67.02 Aligned_cols=41 Identities=32% Similarity=0.470 Sum_probs=36.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+..+.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 114 ~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~ 154 (345)
T 1xjd_A 114 KFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKD 154 (345)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCC
Confidence 3447788899999999999999987 9999999999999875
No 195
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=97.97 E-value=8.4e-06 Score=66.80 Aligned_cols=40 Identities=33% Similarity=0.592 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhC-CCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHD-HSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~-~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|.. . ++|||+||+||+++.+
T Consensus 143 ~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~ 183 (397)
T 1wak_A 143 LPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVN 183 (397)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEecc
Confidence 45888999999999999999986 6 9999999999999864
No 196
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=97.97 E-value=6.8e-06 Score=64.94 Aligned_cols=39 Identities=28% Similarity=0.520 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 135 ~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~ 173 (298)
T 2zv2_A 135 SEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGED 173 (298)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCC
Confidence 47788899999999999999987 9999999999999875
No 197
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=97.97 E-value=6.2e-06 Score=68.66 Aligned_cols=41 Identities=29% Similarity=0.399 Sum_probs=36.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
-.+.....++.+++.|++|+|... |+|||+||+||++|.++
T Consensus 159 l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g 199 (412)
T 2vd5_A 159 IPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCG 199 (412)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCC
Confidence 447778889999999999999987 99999999999998753
No 198
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=97.96 E-value=8.1e-06 Score=65.02 Aligned_cols=42 Identities=24% Similarity=0.527 Sum_probs=37.6
Q ss_pred cccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 175 RNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 175 ~~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
....+..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 127 ~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~ 168 (307)
T 3lb7_A 127 TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEG 168 (307)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTT
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCC
Confidence 34458889999999999999999987 9999999999999875
No 199
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=97.96 E-value=6.6e-06 Score=66.32 Aligned_cols=39 Identities=28% Similarity=0.466 Sum_probs=36.1
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|..+..++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 170 ~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~ 208 (344)
T 1rjb_A 170 TFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHG 208 (344)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---EEETTCSGGGEEEETT
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEEcCC
Confidence 47889999999999999999987 9999999999999865
No 200
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=97.96 E-value=6.7e-06 Score=66.56 Aligned_cols=40 Identities=23% Similarity=0.348 Sum_probs=36.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|++|||... ++|||+||+||+++.+
T Consensus 102 ~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~ 141 (337)
T 1o6l_A 102 FTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKD 141 (337)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCC
Confidence 347778889999999999999987 9999999999999875
No 201
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=97.96 E-value=6.9e-06 Score=65.95 Aligned_cols=41 Identities=27% Similarity=0.434 Sum_probs=37.2
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...+..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 147 ~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~ 187 (325)
T 3kul_A 147 QFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSN 187 (325)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCC
Confidence 3458889999999999999999987 9999999999999875
No 202
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=97.96 E-value=5.3e-06 Score=66.48 Aligned_cols=44 Identities=30% Similarity=0.489 Sum_probs=37.7
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhC-------CCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHD-------HSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~-------~~~~i~h~dlk~~nill~~~ 219 (220)
.-.|..+..++.+++.|+.|+|+. ..+.++|||+||+||+++++
T Consensus 117 ~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~ 167 (322)
T 3soc_A 117 VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNN 167 (322)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCC
Confidence 355889999999999999999986 12259999999999999875
No 203
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=97.95 E-value=6.3e-06 Score=64.36 Aligned_cols=39 Identities=31% Similarity=0.606 Sum_probs=35.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.
T Consensus 112 ~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~ 150 (289)
T 1x8b_A 112 FKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISR 150 (289)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC-
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcC
Confidence 347888999999999999999987 999999999999974
No 204
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=97.95 E-value=5.1e-06 Score=67.97 Aligned_cols=38 Identities=26% Similarity=0.509 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
.|.....++.+++.|+.|||... ++|||+||+||+++.
T Consensus 179 ~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~ 216 (367)
T 3l9p_A 179 AMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC 216 (367)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESC
T ss_pred cHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEec
Confidence 47889999999999999999987 999999999999984
No 205
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=97.95 E-value=7.4e-06 Score=64.53 Aligned_cols=41 Identities=27% Similarity=0.486 Sum_probs=36.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.+.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 97 ~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~ 137 (292)
T 3o0g_A 97 DLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRN 137 (292)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCC
Confidence 3447788999999999999999987 9999999999999875
No 206
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=97.95 E-value=7.1e-06 Score=66.61 Aligned_cols=41 Identities=27% Similarity=0.416 Sum_probs=36.7
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.+.....++.+++.|++|||... ++|||+||+||+++.+
T Consensus 106 ~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~ 146 (345)
T 3a8x_A 106 KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSE 146 (345)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCC
Confidence 3447788899999999999999987 9999999999999875
No 207
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=97.95 E-value=7.1e-06 Score=67.46 Aligned_cols=40 Identities=33% Similarity=0.448 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|||... ++|||+||+||+++.+
T Consensus 125 ~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~ 164 (389)
T 3gni_B 125 MNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVD 164 (389)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCC
Confidence 447788999999999999999987 9999999999999865
No 208
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=97.95 E-value=7.2e-06 Score=67.42 Aligned_cols=40 Identities=23% Similarity=0.509 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.++..+..++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 106 ~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~ 145 (388)
T 3oz6_A 106 LEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAE 145 (388)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCC
Confidence 347778889999999999999987 9999999999999876
No 209
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=97.95 E-value=7.2e-06 Score=65.76 Aligned_cols=44 Identities=27% Similarity=0.374 Sum_probs=37.5
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCC-----CCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDH-----STLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~-----~~~i~h~dlk~~nill~~~ 219 (220)
.-.+.....++.+++.|+.|+|... .+.++|||+||+||+++.+
T Consensus 130 ~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~ 178 (337)
T 3mdy_A 130 TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN 178 (337)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCC
Confidence 3458889999999999999999861 2359999999999999865
No 210
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=97.95 E-value=6.4e-06 Score=68.64 Aligned_cols=42 Identities=26% Similarity=0.424 Sum_probs=36.8
Q ss_pred cccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 175 RNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 175 ~~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..-.+.....++.+++.|+.|||... |+|||+||+||+++.+
T Consensus 151 ~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~ 192 (420)
T 1j1b_A 151 QTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPD 192 (420)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCC
Confidence 33447788999999999999999877 9999999999999854
No 211
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=97.95 E-value=1.1e-05 Score=64.77 Aligned_cols=40 Identities=38% Similarity=0.533 Sum_probs=35.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 103 ~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~ 142 (318)
T 1fot_A 103 FPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKN 142 (318)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCC
Confidence 447778889999999999999887 9999999999999875
No 212
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=97.94 E-value=5.4e-06 Score=68.01 Aligned_cols=41 Identities=27% Similarity=0.438 Sum_probs=37.2
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...|..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 143 ~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~ 183 (373)
T 2qol_A 143 QFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSN 183 (373)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCC
Confidence 3458889999999999999999887 9999999999999875
No 213
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=97.94 E-value=9.6e-06 Score=65.96 Aligned_cols=40 Identities=30% Similarity=0.483 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 138 ~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~ 177 (350)
T 1rdq_E 138 FSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQ 177 (350)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCC
Confidence 447788899999999999999987 9999999999999875
No 214
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=97.94 E-value=1.1e-05 Score=65.09 Aligned_cols=41 Identities=22% Similarity=0.361 Sum_probs=37.2
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.+..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 126 ~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~ 166 (335)
T 3dls_A 126 RLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAED 166 (335)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCC
Confidence 4458889999999999999999987 9999999999999875
No 215
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=97.94 E-value=5.4e-06 Score=65.47 Aligned_cols=39 Identities=10% Similarity=0.080 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
.....+++.+++.|++|+|... ++|||+||+||+++.++
T Consensus 128 ~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g 166 (286)
T 3uqc_A 128 PVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDG 166 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTS
T ss_pred hHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCC
Confidence 4457789999999999999987 99999999999998763
No 216
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=97.94 E-value=7.5e-06 Score=64.97 Aligned_cols=40 Identities=25% Similarity=0.485 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 147 ~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp~NIli~~~ 186 (314)
T 2ivs_A 147 LTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEG 186 (314)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC---CcccccchheEEEcCC
Confidence 347788999999999999999987 9999999999999875
No 217
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=97.94 E-value=6.2e-06 Score=68.94 Aligned_cols=40 Identities=28% Similarity=0.612 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|.....++.+++.|++|||... ++|||+||+||+++.+
T Consensus 197 ~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~ 236 (429)
T 3kvw_A 197 FSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQ 236 (429)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESST
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccC
Confidence 348889999999999999999987 9999999999999875
No 218
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=97.94 E-value=1.1e-05 Score=66.45 Aligned_cols=42 Identities=29% Similarity=0.596 Sum_probs=37.1
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
.-.+.....++.+++.|+.|||... |+|||+||+||+++.++
T Consensus 111 ~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g 152 (384)
T 4fr4_A 111 HFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHG 152 (384)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCC
Confidence 3447788899999999999999987 99999999999998763
No 219
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.93 E-value=3e-05 Score=64.29 Aligned_cols=107 Identities=11% Similarity=0.097 Sum_probs=73.5
Q ss_pred CCCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCC----CCChhhhcCccChhhhcCCCCCCEEeccCCcc
Q 038318 1 MLGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSG----FLPSNIEKLKVLVDCFGSLTSLEFLDISNNNL 76 (220)
Q Consensus 1 ~l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l 76 (220)
+|.+ .+|+.+.+ .+.++..-+..|.++++|+.+++.+|.+.. .++. ..|.++++|+.+++.+ .+
T Consensus 244 aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~---------~aF~~c~~L~~l~l~~-~i 311 (401)
T 4fdw_A 244 AFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHP---------YCLEGCPKLARFEIPE-SI 311 (401)
T ss_dssp TTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECT---------TTTTTCTTCCEECCCT-TC
T ss_pred cccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECH---------HHhhCCccCCeEEeCC-ce
Confidence 3555 67888888 455663446778899999999999887651 1332 3577888888888884 46
Q ss_pred cccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccc
Q 038318 77 FGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWN 121 (220)
Q Consensus 77 ~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n 121 (220)
+..-..+|.++.+|+.+++..| ++..-... ... +|+.+++.+|
T Consensus 312 ~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n 355 (401)
T 4fdw_A 312 RILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGT 355 (401)
T ss_dssp CEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCS
T ss_pred EEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCC
Confidence 6455667888888888888654 54322222 444 7888888777
No 220
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=97.93 E-value=7.6e-06 Score=68.67 Aligned_cols=42 Identities=33% Similarity=0.453 Sum_probs=37.1
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
+-.+.....++.+++.|++|+|... |+|||+||+||++|.++
T Consensus 171 ~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g 212 (437)
T 4aw2_A 171 RLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNG 212 (437)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCC
Confidence 3447788899999999999999987 99999999999998763
No 221
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=97.93 E-value=8.3e-06 Score=65.38 Aligned_cols=41 Identities=27% Similarity=0.447 Sum_probs=37.3
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+-.|..+..++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 137 ~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 137 RLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLD 177 (321)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCC
Confidence 3458899999999999999999987 9999999999999865
No 222
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=97.93 E-value=8.8e-06 Score=64.46 Aligned_cols=40 Identities=30% Similarity=0.434 Sum_probs=37.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 130 ~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~ 169 (307)
T 2nru_A 130 LSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEA 169 (307)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEcCC
Confidence 458899999999999999999887 9999999999999875
No 223
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=97.93 E-value=6.6e-06 Score=65.63 Aligned_cols=42 Identities=31% Similarity=0.502 Sum_probs=37.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+..+..++.+++.|+.|+|.. .++++|||+||+||+++++
T Consensus 134 ~~~~~~~~i~~qi~~aL~~LH~~-~~~ivH~Dikp~NIll~~~ 175 (309)
T 3p86_A 134 LDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKK 175 (309)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTS-SSCCCCTTCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHcC-CCCEECCCCChhhEEEeCC
Confidence 34778899999999999999987 4679999999999999876
No 224
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=97.93 E-value=8.2e-06 Score=66.92 Aligned_cols=40 Identities=28% Similarity=0.449 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 210 ~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~ 249 (377)
T 3cbl_A 210 LRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEK 249 (377)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCC
Confidence 447888999999999999999987 9999999999999875
No 225
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=97.93 E-value=6.4e-06 Score=64.94 Aligned_cols=40 Identities=23% Similarity=0.403 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 111 ~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~ 150 (295)
T 3ugc_A 111 IDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENE 150 (295)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEET
T ss_pred cCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCC
Confidence 458889999999999999999887 9999999999999765
No 226
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=97.92 E-value=1.2e-05 Score=64.13 Aligned_cols=40 Identities=25% Similarity=0.394 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 116 ~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~ 155 (311)
T 3niz_A 116 LQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSD 155 (311)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCC
Confidence 447788899999999999999887 9999999999999865
No 227
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=97.92 E-value=6.6e-06 Score=66.13 Aligned_cols=41 Identities=27% Similarity=0.443 Sum_probs=36.7
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 113 ~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~ 153 (327)
T 3lzb_A 113 NIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTP 153 (327)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEET
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCC
Confidence 3457888999999999999999987 9999999999999764
No 228
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=97.92 E-value=5.3e-06 Score=64.30 Aligned_cols=42 Identities=21% Similarity=0.398 Sum_probs=37.8
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-++..+..++.+++.|+.|+|.. .++++|||+||+||+++++
T Consensus 108 ~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~ 149 (271)
T 3kmu_A 108 VDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDED 149 (271)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCC
Confidence 35889999999999999999976 5679999999999999876
No 229
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=97.92 E-value=7.9e-06 Score=66.10 Aligned_cols=41 Identities=32% Similarity=0.521 Sum_probs=36.9
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.+..+..++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 147 ~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 147 TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYK 187 (345)
T ss_dssp BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccC
Confidence 3458899999999999999999987 9999999999999764
No 230
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=97.92 E-value=1.1e-05 Score=62.65 Aligned_cols=40 Identities=25% Similarity=0.455 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 101 ~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~ 140 (268)
T 3sxs_A 101 LEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRD 140 (268)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCC
Confidence 458889999999999999999987 9999999999999875
No 231
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=97.92 E-value=1.3e-05 Score=67.02 Aligned_cols=41 Identities=24% Similarity=0.476 Sum_probs=37.3
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 125 ~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~ 165 (432)
T 3n9x_A 125 FLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQD 165 (432)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCC
Confidence 3458889999999999999999987 9999999999999876
No 232
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=97.91 E-value=6.8e-06 Score=65.66 Aligned_cols=40 Identities=25% Similarity=0.538 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 134 ~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~ 173 (323)
T 3qup_A 134 LPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAED 173 (323)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTT
T ss_pred cCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCC
Confidence 347889999999999999999987 9999999999999875
No 233
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=97.91 E-value=7.4e-06 Score=65.55 Aligned_cols=43 Identities=21% Similarity=0.411 Sum_probs=38.1
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.|.....++.+++.|+.|+|.. .++++|||+||+||+++++
T Consensus 132 ~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~~ 174 (337)
T 3ll6_A 132 PLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQ 174 (337)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECCC
Confidence 345889999999999999999976 4679999999999999875
No 234
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=97.90 E-value=7.2e-06 Score=67.36 Aligned_cols=40 Identities=28% Similarity=0.458 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.|..+..++.+++.|+.|||... ++|||+||+||+++++
T Consensus 188 l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~ 227 (382)
T 3tt0_A 188 LSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTED 227 (382)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTT
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEEcCC
Confidence 348889999999999999999887 9999999999999865
No 235
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=97.90 E-value=6.1e-06 Score=64.77 Aligned_cols=40 Identities=20% Similarity=0.350 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+..+..++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 110 ~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~ 149 (289)
T 4fvq_A 110 INILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIRE 149 (289)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecC
Confidence 457788999999999999999987 9999999999999764
No 236
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=97.90 E-value=9.8e-06 Score=67.41 Aligned_cols=41 Identities=29% Similarity=0.379 Sum_probs=36.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
..+.....++.+++.|++|+|... |+|||+||+||+++.++
T Consensus 165 ~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g 205 (410)
T 3v8s_A 165 VPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSG 205 (410)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCC
Confidence 346677889999999999999987 99999999999998763
No 237
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=97.89 E-value=1.1e-05 Score=63.92 Aligned_cols=40 Identities=25% Similarity=0.517 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 113 ~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~ 152 (297)
T 3fxz_A 113 MDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMD 152 (297)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCC
Confidence 347788899999999999999987 9999999999999865
No 238
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=97.89 E-value=9.8e-06 Score=66.54 Aligned_cols=40 Identities=33% Similarity=0.401 Sum_probs=35.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|++|||... ++|||+||+||+++.+
T Consensus 136 ~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~ 175 (373)
T 2r5t_A 136 FLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQ 175 (373)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCC
Confidence 346677789999999999999987 9999999999999875
No 239
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=97.89 E-value=1.1e-05 Score=64.44 Aligned_cols=39 Identities=26% Similarity=0.491 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 106 ~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~ 144 (317)
T 2pmi_A 106 ELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKR 144 (317)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCC
Confidence 47788889999999999999887 9999999999999875
No 240
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=97.89 E-value=5.2e-06 Score=67.28 Aligned_cols=40 Identities=25% Similarity=0.425 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.|.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 190 l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~ 229 (359)
T 3vhe_A 190 LTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEK 229 (359)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGG
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCC
Confidence 348889999999999999999987 9999999999999754
No 241
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=97.89 E-value=9.5e-06 Score=68.06 Aligned_cols=40 Identities=23% Similarity=0.370 Sum_probs=35.8
Q ss_pred cCHHHHHHHHHHHHHHHHHHhh-CCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHH-DHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~-~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.||+|||. .. |+|||+||+||+++.+
T Consensus 245 ~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~ 285 (446)
T 4ejn_A 245 FSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKD 285 (446)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSS
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCC
Confidence 3477889999999999999997 65 9999999999999875
No 242
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=97.89 E-value=1e-05 Score=65.17 Aligned_cols=40 Identities=25% Similarity=0.501 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 111 l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~ 150 (328)
T 3fe3_A 111 MKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDAD 150 (328)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCC
Confidence 447788899999999999999987 9999999999999875
No 243
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=97.88 E-value=8.5e-06 Score=64.09 Aligned_cols=40 Identities=25% Similarity=0.481 Sum_probs=36.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 97 ~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~ 136 (288)
T 1ob3_A 97 LESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINRE 136 (288)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCC
Confidence 347788899999999999999887 9999999999999875
No 244
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=97.87 E-value=8.2e-06 Score=68.96 Aligned_cols=40 Identities=23% Similarity=0.429 Sum_probs=36.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... |+|||+||+||+++.+
T Consensus 161 l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~ 200 (464)
T 3ttj_A 161 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSD 200 (464)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCC
Confidence 347788899999999999999987 9999999999999876
No 245
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=97.87 E-value=1.2e-05 Score=64.70 Aligned_cols=39 Identities=28% Similarity=0.514 Sum_probs=36.1
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 155 ~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~ 193 (334)
T 2pvf_A 155 TFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTEN 193 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTT
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEEcCC
Confidence 48889999999999999999987 9999999999999865
No 246
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=97.87 E-value=1.2e-05 Score=65.14 Aligned_cols=41 Identities=27% Similarity=0.489 Sum_probs=37.1
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+..+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 120 ~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~ 160 (351)
T 3mi9_A 120 KFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRD 160 (351)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCC
Confidence 3458889999999999999999987 9999999999999865
No 247
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=97.87 E-value=6.8e-06 Score=64.38 Aligned_cols=40 Identities=20% Similarity=0.467 Sum_probs=36.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-++.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 113 ~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~ 152 (281)
T 1mp8_A 113 LDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSN 152 (281)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEET
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCC
Confidence 458889999999999999999987 9999999999999854
No 248
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=97.87 E-value=8.8e-06 Score=64.06 Aligned_cols=41 Identities=32% Similarity=0.568 Sum_probs=37.0
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...+..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 120 ~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~ 160 (298)
T 3pls_A 120 NPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDES 160 (298)
T ss_dssp CCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCC
Confidence 3458889999999999999999987 9999999999999876
No 249
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=97.87 E-value=6e-06 Score=66.43 Aligned_cols=40 Identities=33% Similarity=0.431 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.|..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 171 l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~ 210 (343)
T 1luf_A 171 LSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGEN 210 (343)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEECCC
Confidence 348889999999999999999987 9999999999999864
No 250
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=97.87 E-value=1.2e-05 Score=64.47 Aligned_cols=40 Identities=28% Similarity=0.440 Sum_probs=36.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 102 ~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~ 141 (323)
T 3tki_A 102 MPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDER 141 (323)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCC
Confidence 347788999999999999999887 9999999999999875
No 251
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=97.87 E-value=8.9e-06 Score=66.74 Aligned_cols=40 Identities=25% Similarity=0.496 Sum_probs=36.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 189 ~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~ 228 (373)
T 3c1x_A 189 PTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEK 228 (373)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCC
Confidence 458889999999999999999987 9999999999999875
No 252
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=97.87 E-value=1.1e-05 Score=63.33 Aligned_cols=43 Identities=33% Similarity=0.519 Sum_probs=37.6
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.|..+..++.+++.|++|+|.. .++++|||+||+||+++.+
T Consensus 118 ~~~~~~~~~~~~~l~~~l~~lH~~-~~~ivH~dikp~Nil~~~~ 160 (287)
T 4f0f_A 118 PIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSL 160 (287)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCSCCSGGGEEESCC
T ss_pred CccHHHHHHHHHHHHHHHHHHHhC-CCCeecCCCCcceEEEecc
Confidence 345889999999999999999987 4669999999999999754
No 253
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=97.86 E-value=9.3e-06 Score=64.55 Aligned_cols=40 Identities=28% Similarity=0.598 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 144 ~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 144 IPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDD 183 (313)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCC
Confidence 348899999999999999999887 9999999999999875
No 254
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=97.86 E-value=1.1e-05 Score=63.28 Aligned_cols=38 Identities=29% Similarity=0.580 Sum_probs=35.1
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceee
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill 216 (220)
.-.+..+..++.+++.|+.|+|... ++|||+||+||++
T Consensus 101 ~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~ 138 (296)
T 4hgt_A 101 KFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLM 138 (296)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeee
Confidence 3458899999999999999999987 9999999999999
No 255
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=97.86 E-value=1.3e-05 Score=62.77 Aligned_cols=41 Identities=24% Similarity=0.483 Sum_probs=37.2
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+..+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 116 ~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~ 156 (283)
T 3gen_A 116 RFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQ 156 (283)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCC
Confidence 3458889999999999999999987 9999999999999875
No 256
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=97.86 E-value=9.7e-06 Score=64.66 Aligned_cols=39 Identities=26% Similarity=0.497 Sum_probs=36.3
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 136 ~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 136 SLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 174 (322)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCC
Confidence 47889999999999999999987 9999999999999875
No 257
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=97.86 E-value=1.3e-05 Score=62.51 Aligned_cols=40 Identities=23% Similarity=0.519 Sum_probs=36.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 106 ~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~ 145 (279)
T 1qpc_A 106 LTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDT 145 (279)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCC
Confidence 347889999999999999999987 9999999999999875
No 258
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=97.86 E-value=1.3e-05 Score=65.19 Aligned_cols=41 Identities=29% Similarity=0.492 Sum_probs=36.9
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+-.+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 104 ~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~ 144 (347)
T 3zgw_A 104 RLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEY 144 (347)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCC
Confidence 3457888999999999999999987 9999999999999875
No 259
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.86 E-value=2.4e-06 Score=62.56 Aligned_cols=82 Identities=13% Similarity=0.067 Sum_probs=39.7
Q ss_pred CCCceecCCCccCCccChhhhccccCCeeeccCCC-CCCCCChhhhcCccChhhhcCC----CCCCEEeccCCc-ccccC
Q 038318 7 YLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNS-LSGFLPSNIEKLKVLVDCFGSL----TSLEFLDISNNN-LFGKI 80 (220)
Q Consensus 7 ~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~Lp~~~~~l----~~L~~L~ls~N~-l~~~~ 80 (220)
+|+.||++++.++..--..+..+++|+.|+|+++. ++. ..+. .+..+ ++|++|+++++. +|..-
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD---~gL~-------~L~~~~~~~~~L~~L~Ls~C~~ITD~G 131 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIED---GCLE-------RLSQLENLQKSMLEMEIISCGNVTDKG 131 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCH---HHHH-------HHHTCHHHHHHCCEEEEESCTTCCHHH
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCH---HHHH-------HHHhcccccCCCCEEEcCCCCcCCHHH
Confidence 35566666665553333344556666666666653 321 1111 12222 246666666653 44322
Q ss_pred CccccCCCCCCeeeccCC
Q 038318 81 PKSFKGLSRLKQLNAAHS 98 (220)
Q Consensus 81 p~~~~~l~~L~~l~l~~n 98 (220)
-..+.++++|++|+++++
T Consensus 132 l~~L~~~~~L~~L~L~~c 149 (176)
T 3e4g_A 132 IIALHHFRNLKYLFLSDL 149 (176)
T ss_dssp HHHGGGCTTCCEEEEESC
T ss_pred HHHHhcCCCCCEEECCCC
Confidence 233455566666666554
No 260
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=97.86 E-value=1.2e-05 Score=64.90 Aligned_cols=41 Identities=24% Similarity=0.374 Sum_probs=36.3
Q ss_pred cccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 175 RNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 175 ~~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
....+..+..++.+++.|+.|+|... ++|||+||+||++++
T Consensus 103 ~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~~ 143 (343)
T 3dbq_A 103 KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD 143 (343)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEEC
Confidence 33457888999999999999999987 999999999999964
No 261
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=97.86 E-value=1.2e-05 Score=63.30 Aligned_cols=40 Identities=28% Similarity=0.518 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 125 ~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~ 164 (298)
T 3f66_A 125 PTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEK 164 (298)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCC
Confidence 457888999999999999999987 9999999999999875
No 262
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=97.85 E-value=1e-05 Score=63.98 Aligned_cols=40 Identities=33% Similarity=0.496 Sum_probs=36.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 108 ~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~ 147 (294)
T 4eqm_A 108 LSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSN 147 (294)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCC
Confidence 458889999999999999999987 9999999999999865
No 263
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=97.85 E-value=1.3e-05 Score=66.29 Aligned_cols=39 Identities=26% Similarity=0.477 Sum_probs=35.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
-.|.....++.+++.|+.|+|... |+|||+||+||+++.
T Consensus 158 l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~ 196 (400)
T 1nxk_A 158 FTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTS 196 (400)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEec
Confidence 348889999999999999999987 999999999999986
No 264
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=97.85 E-value=9.6e-06 Score=63.82 Aligned_cols=40 Identities=28% Similarity=0.579 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 117 ~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~ 156 (289)
T 3og7_A 117 FEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHED 156 (289)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCC
Confidence 448889999999999999999987 9999999999999865
No 265
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=97.85 E-value=9.4e-06 Score=68.29 Aligned_cols=38 Identities=18% Similarity=0.503 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+.....++.+++.|++|||... ++|||+||+||+++++
T Consensus 283 ~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~ 320 (454)
T 1qcf_A 283 LPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSAS 320 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTT
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCC
Confidence 6778899999999999999987 9999999999999875
No 266
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=97.85 E-value=1.3e-05 Score=62.43 Aligned_cols=41 Identities=32% Similarity=0.604 Sum_probs=37.3
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 108 ~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~ 148 (275)
T 2eue_A 108 KMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEH 148 (275)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCC
Confidence 3458889999999999999999987 9999999999999876
No 267
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=97.85 E-value=1e-05 Score=65.85 Aligned_cols=40 Identities=28% Similarity=0.366 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|||... ++|||+||+||+++.+
T Consensus 156 ~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~ 195 (355)
T 1vzo_A 156 FTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSN 195 (355)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCC
Confidence 347788899999999999999887 9999999999999875
No 268
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=97.84 E-value=1.5e-05 Score=64.56 Aligned_cols=41 Identities=32% Similarity=0.603 Sum_probs=37.2
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+-.+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 104 ~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~ 144 (336)
T 3h4j_B 104 RMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDN 144 (336)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCC
Confidence 3457888999999999999999987 9999999999999876
No 269
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=97.84 E-value=1.7e-05 Score=61.84 Aligned_cols=41 Identities=22% Similarity=0.470 Sum_probs=36.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.|..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 118 ~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~ 158 (284)
T 2a19_B 118 KLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDT 158 (284)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEET
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCC
Confidence 3458889999999999999999887 9999999999999764
No 270
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=97.84 E-value=1.2e-05 Score=62.37 Aligned_cols=43 Identities=28% Similarity=0.412 Sum_probs=38.3
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
+..+.....++.+++.|+.|+|.....+++|||+||+||++++
T Consensus 101 ~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~ 143 (271)
T 3dtc_A 101 RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQ 143 (271)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEec
Confidence 4457888999999999999999987677999999999999975
No 271
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=97.84 E-value=2e-05 Score=62.23 Aligned_cols=41 Identities=27% Similarity=0.448 Sum_probs=36.9
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+..+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 105 ~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~ 145 (305)
T 2wtk_C 105 RFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTG 145 (305)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTT
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCC
Confidence 3457888999999999999999987 9999999999999765
No 272
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=97.84 E-value=1.1e-05 Score=64.09 Aligned_cols=42 Identities=21% Similarity=0.432 Sum_probs=36.2
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.++++|+.|+|+.....++|||+||+||+++.+
T Consensus 100 ~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~ 141 (307)
T 2eva_A 100 TAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAG 141 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETT
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCC
Confidence 477888999999999999998543559999999999999764
No 273
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=97.84 E-value=1.1e-05 Score=63.59 Aligned_cols=40 Identities=23% Similarity=0.468 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+..+..++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 123 ~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~ 162 (302)
T 4e5w_A 123 INLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESE 162 (302)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEET
T ss_pred CCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCC
Confidence 458889999999999999999987 9999999999999764
No 274
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=97.84 E-value=1.4e-05 Score=64.22 Aligned_cols=39 Identities=21% Similarity=0.426 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 119 ~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~ 157 (327)
T 3a62_A 119 MEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQ 157 (327)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTT
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCC
Confidence 46678889999999999999987 9999999999999865
No 275
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=97.84 E-value=1.2e-05 Score=64.78 Aligned_cols=41 Identities=27% Similarity=0.418 Sum_probs=36.6
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhC-CCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHD-HSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~-~~~~i~h~dlk~~nill~~~ 219 (220)
.-.|.....++.+++.|+.|+|.. . ++|||+||+||+++.+
T Consensus 149 ~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~ 190 (340)
T 3an0_A 149 TIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINAL 190 (340)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECST
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCC
Confidence 345888999999999999999975 5 9999999999999875
No 276
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=97.84 E-value=1.4e-05 Score=67.19 Aligned_cols=39 Identities=31% Similarity=0.548 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|++|||... ++|||+||+||+++++
T Consensus 287 ~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~ 325 (450)
T 1k9a_A 287 GGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSED 325 (450)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTT
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCC
Confidence 37788999999999999999987 9999999999999875
No 277
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=97.84 E-value=1.5e-05 Score=63.33 Aligned_cols=40 Identities=30% Similarity=0.498 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+..+..++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 131 ~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~ 170 (317)
T 2buj_A 131 LTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDE 170 (317)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCC
Confidence 458889999999999999999987 9999999999999765
No 278
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=97.84 E-value=1.4e-05 Score=64.86 Aligned_cols=39 Identities=23% Similarity=0.455 Sum_probs=35.2
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 128 ~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~ 166 (351)
T 3c0i_A 128 SEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASK 166 (351)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecC
Confidence 47788899999999999999987 9999999999999753
No 279
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=97.83 E-value=9e-06 Score=63.75 Aligned_cols=41 Identities=27% Similarity=0.418 Sum_probs=36.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhC-CCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHD-HSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~-~~~~i~h~dlk~~nill~~~ 219 (220)
.-.|.....++.+++.|+.|+|.. . ++|||+||+||+++.+
T Consensus 105 ~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~ 146 (290)
T 3fme_A 105 TIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINAL 146 (290)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCC
Confidence 345888999999999999999986 6 9999999999999875
No 280
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=97.83 E-value=8.7e-06 Score=66.00 Aligned_cols=41 Identities=22% Similarity=0.432 Sum_probs=37.3
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.+..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 155 ~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl~~~~ 195 (352)
T 2jii_A 155 VLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFVDPE 195 (352)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEEEETT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEEcCC
Confidence 3458899999999999999999987 9999999999999875
No 281
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=97.83 E-value=1.6e-05 Score=65.06 Aligned_cols=40 Identities=25% Similarity=0.469 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 125 l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~ 164 (367)
T 1cm8_A 125 LGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNED 164 (367)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCC
Confidence 447788899999999999999987 9999999999999876
No 282
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=97.83 E-value=1.6e-05 Score=64.29 Aligned_cols=40 Identities=25% Similarity=0.452 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 109 ~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~ 148 (353)
T 2b9h_A 109 LSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSN 148 (353)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCC
Confidence 447788999999999999999987 9999999999999865
No 283
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=97.83 E-value=1.1e-05 Score=64.22 Aligned_cols=41 Identities=24% Similarity=0.528 Sum_probs=36.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...+.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 112 ~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~ 152 (311)
T 3ork_A 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISAT 152 (311)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCC
Confidence 3458888999999999999999987 9999999999999765
No 284
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=97.83 E-value=1.7e-05 Score=61.92 Aligned_cols=40 Identities=25% Similarity=0.509 Sum_probs=36.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 106 ~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~ 145 (279)
T 3fdn_A 106 FDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSA 145 (279)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCC
Confidence 347788999999999999999876 9999999999999865
No 285
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=97.83 E-value=1.4e-05 Score=64.81 Aligned_cols=39 Identities=36% Similarity=0.628 Sum_probs=35.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
..+.....++.+++.|+.|+|... ++|||+||+||++++
T Consensus 134 ~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~ 172 (360)
T 3llt_A 134 FHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDD 172 (360)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEcc
Confidence 447788999999999999999887 999999999999975
No 286
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=97.83 E-value=1.8e-05 Score=63.35 Aligned_cols=40 Identities=33% Similarity=0.586 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 97 ~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~ 136 (324)
T 3mtl_A 97 INMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINER 136 (324)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCC
Confidence 447788899999999999999887 9999999999999865
No 287
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=97.82 E-value=1.3e-05 Score=64.47 Aligned_cols=44 Identities=27% Similarity=0.447 Sum_probs=36.6
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCC-----CCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDH-----STLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~-----~~~i~h~dlk~~nill~~~ 219 (220)
...|..+..++.+++.|+.|+|... ...++|||+||+||+++++
T Consensus 135 ~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~ 183 (342)
T 1b6c_B 135 TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN 183 (342)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTT
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCC
Confidence 3458899999999999999999321 2349999999999999865
No 288
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=97.82 E-value=1.1e-05 Score=65.47 Aligned_cols=41 Identities=27% Similarity=0.415 Sum_probs=37.1
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...|..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 150 ~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~ 190 (348)
T 1u5q_A 150 PLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEP 190 (348)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCC
Confidence 3458889999999999999999987 9999999999999875
No 289
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=97.82 E-value=1.5e-05 Score=69.09 Aligned_cols=41 Identities=29% Similarity=0.408 Sum_probs=36.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
-.+.....++.+++.|++|||... |+|||+||+||+++.++
T Consensus 283 l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g 323 (576)
T 2acx_A 283 FPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHG 323 (576)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCC
Confidence 347788899999999999999987 99999999999998753
No 290
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=97.82 E-value=1.7e-05 Score=63.74 Aligned_cols=40 Identities=23% Similarity=0.405 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 111 ~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~ 150 (326)
T 2y0a_A 111 LTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDR 150 (326)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCS
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecC
Confidence 447888999999999999999887 9999999999999764
No 291
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=97.82 E-value=1.8e-05 Score=61.75 Aligned_cols=40 Identities=23% Similarity=0.372 Sum_probs=36.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 109 ~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~ 148 (278)
T 3cok_A 109 FSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRN 148 (278)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCC
Confidence 357889999999999999999987 9999999999999865
No 292
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=97.82 E-value=9.9e-06 Score=64.97 Aligned_cols=39 Identities=21% Similarity=0.417 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 162 ~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 162 STRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNG 200 (333)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEGG
T ss_pred CHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECCC
Confidence 47788999999999999999887 9999999999999754
No 293
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=97.82 E-value=1.5e-05 Score=65.83 Aligned_cols=39 Identities=28% Similarity=0.439 Sum_probs=35.3
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
...+.....++.+++.|+.|+|... ++|||+||+||+++
T Consensus 137 ~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~ 175 (394)
T 4e7w_A 137 TMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLD 175 (394)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEc
Confidence 3447788899999999999999987 99999999999998
No 294
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=97.82 E-value=1.1e-05 Score=63.89 Aligned_cols=40 Identities=25% Similarity=0.455 Sum_probs=36.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..|.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 142 ~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~ 181 (313)
T 1t46_A 142 LDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHG 181 (313)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEETT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEcCC
Confidence 348889999999999999999987 9999999999999865
No 295
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=97.82 E-value=1.7e-05 Score=64.57 Aligned_cols=41 Identities=24% Similarity=0.511 Sum_probs=37.0
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 124 ~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~ 164 (364)
T 3qyz_A 124 HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTT 164 (364)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCC
Confidence 3457888999999999999999987 9999999999999875
No 296
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=97.81 E-value=2.2e-05 Score=63.01 Aligned_cols=41 Identities=27% Similarity=0.418 Sum_probs=36.0
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.+.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 102 ~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~ 142 (325)
T 3kn6_A 102 HFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDE 142 (325)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC-
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecC
Confidence 3457888999999999999999887 9999999999999653
No 297
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=97.81 E-value=1.4e-05 Score=64.09 Aligned_cols=40 Identities=28% Similarity=0.392 Sum_probs=36.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 124 ~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~ 163 (327)
T 3lxl_A 124 LDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESE 163 (327)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEET
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCC
Confidence 458889999999999999999887 9999999999999765
No 298
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=97.81 E-value=1.9e-05 Score=67.03 Aligned_cols=39 Identities=28% Similarity=0.531 Sum_probs=35.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
...|..+..++.+++.||+|||... |+||||||+||+++
T Consensus 99 ~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~ 137 (483)
T 3sv0_A 99 KLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMG 137 (483)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEe
Confidence 4458899999999999999999987 99999999999993
No 299
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=97.80 E-value=2.7e-05 Score=63.63 Aligned_cols=41 Identities=22% Similarity=0.459 Sum_probs=36.5
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 111 ~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~ 151 (361)
T 2yab_A 111 SLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDK 151 (361)
T ss_dssp CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCC
Confidence 3457888999999999999999987 9999999999999754
No 300
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=97.80 E-value=2e-05 Score=62.03 Aligned_cols=40 Identities=23% Similarity=0.455 Sum_probs=36.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 112 ~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~ 151 (294)
T 2rku_A 112 LTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNED 151 (294)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCC
Confidence 458889999999999999999987 9999999999999875
No 301
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=97.79 E-value=1.4e-05 Score=65.36 Aligned_cols=40 Identities=25% Similarity=0.508 Sum_probs=36.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 129 l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~ 168 (367)
T 2fst_X 129 LTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNED 168 (367)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCC
Confidence 347788999999999999999987 9999999999999875
No 302
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=97.79 E-value=1.8e-05 Score=63.26 Aligned_cols=38 Identities=32% Similarity=0.544 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 129 ~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~ 166 (330)
T 3nsz_A 129 DYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHE 166 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETT
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCC
Confidence 6678889999999999999887 9999999999999754
No 303
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=97.79 E-value=1.9e-05 Score=63.06 Aligned_cols=38 Identities=24% Similarity=0.589 Sum_probs=35.1
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
.+.....++.+++.|++|+|... ++|||+||+||+++.
T Consensus 116 ~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~ 153 (339)
T 1z57_A 116 RLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQ 153 (339)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESC
T ss_pred cHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEec
Confidence 47788999999999999999987 999999999999975
No 304
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=97.79 E-value=1.3e-05 Score=64.11 Aligned_cols=40 Identities=33% Similarity=0.553 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 139 ~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~ 178 (327)
T 1fvr_A 139 LSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGEN 178 (327)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCC
Confidence 348889999999999999999887 9999999999999764
No 305
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=97.79 E-value=1.4e-05 Score=70.22 Aligned_cols=39 Identities=21% Similarity=0.480 Sum_probs=36.1
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|..+..++.+++.|++|||... |+||||||+||+++++
T Consensus 467 ~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~ 505 (635)
T 4fl3_A 467 KDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQ 505 (635)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEET
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCC
Confidence 38888999999999999999987 9999999999999865
No 306
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=97.79 E-value=1.9e-05 Score=62.12 Aligned_cols=40 Identities=20% Similarity=0.451 Sum_probs=36.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 114 ~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~ 153 (291)
T 1xbb_A 114 VKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQ 153 (291)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEET
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCC
Confidence 447788999999999999999987 9999999999999765
No 307
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=97.79 E-value=1.3e-05 Score=68.31 Aligned_cols=39 Identities=23% Similarity=0.474 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+..+..++.+++.|++|||... ++|||+||+||+++++
T Consensus 316 ~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~ 354 (495)
T 1opk_A 316 SAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGEN 354 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGG
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCC
Confidence 37788999999999999999987 9999999999999764
No 308
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=97.79 E-value=2e-05 Score=63.39 Aligned_cols=40 Identities=23% Similarity=0.455 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 138 l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~ 177 (335)
T 2owb_A 138 LTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNED 177 (335)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCC
Confidence 448889999999999999999987 9999999999999875
No 309
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=97.79 E-value=1.7e-05 Score=68.74 Aligned_cols=37 Identities=32% Similarity=0.483 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
+.....++.+++.||.|||... |+|||+||+||+++.
T Consensus 254 e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~ 290 (573)
T 3uto_A 254 EDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTT 290 (573)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccC
Confidence 6677889999999999999988 999999999999974
No 310
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=97.79 E-value=1.6e-05 Score=65.55 Aligned_cols=39 Identities=26% Similarity=0.363 Sum_probs=35.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
..+..+..++.+++.|+.|+|... |+|||+||+||++++
T Consensus 152 ~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~ 190 (390)
T 2zmd_A 152 IDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD 190 (390)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEESS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEEC
Confidence 347788899999999999999887 999999999999964
No 311
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=97.78 E-value=2.1e-05 Score=62.36 Aligned_cols=40 Identities=25% Similarity=0.415 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 99 ~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~ 138 (311)
T 4agu_A 99 VPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKH 138 (311)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCC
Confidence 447888999999999999999987 9999999999999865
No 312
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=97.78 E-value=1.6e-05 Score=63.23 Aligned_cols=40 Identities=35% Similarity=0.545 Sum_probs=35.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 108 ~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~ 147 (316)
T 2ac3_A 108 FNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHP 147 (316)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccC
Confidence 347788899999999999999987 9999999999999764
No 313
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=97.78 E-value=1.6e-05 Score=64.04 Aligned_cols=41 Identities=24% Similarity=0.464 Sum_probs=37.2
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...+..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 143 ~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~ 183 (333)
T 1mqb_A 143 EFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSN 183 (333)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCC
Confidence 3458889999999999999999987 9999999999999875
No 314
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=97.77 E-value=2.5e-05 Score=64.04 Aligned_cols=41 Identities=20% Similarity=0.399 Sum_probs=36.2
Q ss_pred cccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 175 RNRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 175 ~~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
..-.+.....++.+++.|+.|+|... ++|||+||+||+++.
T Consensus 136 ~~l~~~~~~~i~~qi~~aL~~LH~~g---i~H~Dikp~Nil~~~ 176 (383)
T 3eb0_A 136 RSIPMNLISIYIYQLFRAVGFIHSLG---ICHRDIKPQNLLVNS 176 (383)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEEET
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCc---CccCccCHHHEEEcC
Confidence 33457888999999999999999887 999999999999973
No 315
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=97.77 E-value=1.2e-05 Score=62.57 Aligned_cols=40 Identities=28% Similarity=0.455 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 103 ~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~ 142 (269)
T 4hcu_A 103 FAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGEN 142 (269)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGG
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCC
Confidence 457888999999999999999987 9999999999999754
No 316
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=97.77 E-value=2.3e-05 Score=62.78 Aligned_cols=40 Identities=23% Similarity=0.403 Sum_probs=36.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.++.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 142 ~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~ 181 (326)
T 2w1i_A 142 IDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENE 181 (326)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEET
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCC
Confidence 458889999999999999999887 9999999999999764
No 317
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=97.77 E-value=1.8e-05 Score=62.05 Aligned_cols=40 Identities=20% Similarity=0.352 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 118 ~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~ 157 (291)
T 1u46_A 118 FLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATR 157 (291)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEET
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCC
Confidence 447888999999999999999987 9999999999999764
No 318
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=97.77 E-value=2.3e-05 Score=62.78 Aligned_cols=39 Identities=23% Similarity=0.531 Sum_probs=35.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.
T Consensus 99 ~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~ 137 (321)
T 1tki_A 99 LNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQT 137 (321)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcc
Confidence 347788999999999999999987 999999999999985
No 319
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=97.77 E-value=2.3e-05 Score=62.57 Aligned_cols=40 Identities=23% Similarity=0.463 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 112 ~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~ 151 (321)
T 2a2a_A 112 LSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDK 151 (321)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecC
Confidence 347788999999999999999987 9999999999999765
No 320
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=97.76 E-value=2.4e-05 Score=61.87 Aligned_cols=39 Identities=26% Similarity=0.477 Sum_probs=35.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.
T Consensus 114 ~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~ 152 (299)
T 3m2w_A 114 FTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTS 152 (299)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEec
Confidence 347889999999999999999987 999999999999986
No 321
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=97.76 E-value=1.7e-05 Score=64.38 Aligned_cols=41 Identities=32% Similarity=0.461 Sum_probs=37.0
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 130 ~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~ 170 (362)
T 3pg1_A 130 VISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADN 170 (362)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEEcCC
Confidence 3458889999999999999999987 9999999999999865
No 322
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=97.76 E-value=1.7e-05 Score=61.90 Aligned_cols=39 Identities=31% Similarity=0.548 Sum_probs=35.7
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 115 ~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~ 153 (278)
T 1byg_A 115 GGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSED 153 (278)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTT
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCC
Confidence 47788999999999999999987 9999999999999865
No 323
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=97.76 E-value=1.9e-05 Score=61.42 Aligned_cols=36 Identities=28% Similarity=0.330 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHHh-hCCCCceEeeCCCCCceeecC
Q 038318 180 SDMLNIMIDVALILEYVH-HDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 180 ~~r~~i~~~ia~~l~~lh-~~~~~~i~h~dlk~~nill~~ 218 (220)
.....++.+++.++.|+| ... ++|||+||+||++++
T Consensus 170 ~~~~~i~~qi~~~l~~lH~~~g---ivHrDlkp~NILl~~ 206 (258)
T 1zth_A 170 LDVEGIFNDVVENVKRLYQEAE---LVHADLSEYNIMYID 206 (258)
T ss_dssp SCHHHHHHHHHHHHHHHHHTSC---EECSSCSTTSEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEEcC
Confidence 356788999999999999 776 999999999999974
No 324
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=97.76 E-value=2.2e-05 Score=61.72 Aligned_cols=39 Identities=28% Similarity=0.566 Sum_probs=35.5
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
.-.+..+..++.+++.|+.|+|... ++|||+||+||+++
T Consensus 101 ~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~ 139 (296)
T 3uzp_A 101 KFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMG 139 (296)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEe
Confidence 3458889999999999999999987 99999999999994
No 325
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=97.76 E-value=1.2e-05 Score=64.96 Aligned_cols=40 Identities=40% Similarity=0.615 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 109 ~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~ 148 (346)
T 1ua2_A 109 LTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDEN 148 (346)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCC
Confidence 346788899999999999999987 9999999999999875
No 326
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=97.76 E-value=2.4e-05 Score=62.42 Aligned_cols=40 Identities=25% Similarity=0.527 Sum_probs=36.8
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+..+..++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 131 ~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~ 170 (318)
T 3lxp_A 131 IGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDND 170 (318)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCC
Confidence 458889999999999999999987 9999999999999875
No 327
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=97.76 E-value=1.4e-05 Score=62.51 Aligned_cols=40 Identities=18% Similarity=0.324 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 110 ~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~ 149 (281)
T 3cc6_A 110 LKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASP 149 (281)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEET
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCC
Confidence 457888999999999999999887 9999999999999764
No 328
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=97.75 E-value=1.2e-05 Score=63.77 Aligned_cols=39 Identities=26% Similarity=0.455 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 146 ~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~ 184 (316)
T 2xir_A 146 TLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEK 184 (316)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGG
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCC
Confidence 47888999999999999999987 9999999999999754
No 329
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=97.75 E-value=2.3e-05 Score=67.50 Aligned_cols=40 Identities=25% Similarity=0.426 Sum_probs=36.0
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
.+.....++.+++.|++|+|... |+|||+||+||+++.++
T Consensus 287 ~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g 326 (543)
T 3c4z_A 287 QEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDG 326 (543)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTS
T ss_pred cHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCC
Confidence 47778889999999999999987 99999999999998763
No 330
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=97.75 E-value=1.9e-05 Score=62.15 Aligned_cols=39 Identities=33% Similarity=0.611 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 114 ~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~ 152 (303)
T 1zy4_A 114 QRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDES 152 (303)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTT
T ss_pred chHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCC
Confidence 46778899999999999999987 9999999999999865
No 331
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=97.75 E-value=2.5e-05 Score=62.87 Aligned_cols=38 Identities=26% Similarity=0.567 Sum_probs=34.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++
T Consensus 120 ~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~ 157 (355)
T 2eu9_A 120 YPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFV 157 (355)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEES
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEe
Confidence 447889999999999999999877 99999999999994
No 332
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=97.75 E-value=2e-05 Score=61.79 Aligned_cols=40 Identities=23% Similarity=0.483 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-++.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 107 ~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~ 146 (287)
T 1u59_A 107 IPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNR 146 (287)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEET
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCC
Confidence 458889999999999999999987 9999999999999764
No 333
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=97.74 E-value=3.5e-05 Score=65.36 Aligned_cols=41 Identities=27% Similarity=0.524 Sum_probs=36.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+-.+.....++.+++.|++|+|... ++|||+||+||+++.+
T Consensus 112 ~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~ 152 (476)
T 2y94_A 112 RLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAH 152 (476)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecC
Confidence 3457788999999999999999887 9999999999999875
No 334
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=97.74 E-value=2.5e-05 Score=61.59 Aligned_cols=34 Identities=21% Similarity=0.240 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 181 DMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 181 ~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
....++.+++.|+.|+|... ++|||+||+||+++
T Consensus 194 ~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl~ 227 (282)
T 1zar_A 194 NPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVS 227 (282)
T ss_dssp CHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE
T ss_pred hHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEEE
Confidence 45679999999999999887 99999999999997
No 335
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=97.74 E-value=2e-05 Score=62.12 Aligned_cols=40 Identities=35% Similarity=0.537 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-++.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 118 ~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~ 157 (303)
T 2vwi_A 118 LDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGED 157 (303)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCC
Confidence 348889999999999999999987 9999999999999875
No 336
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=97.74 E-value=2.8e-05 Score=60.86 Aligned_cols=40 Identities=28% Similarity=0.488 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 111 ~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~ 150 (284)
T 2vgo_A 111 FDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYK 150 (284)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCC
Confidence 347788999999999999999887 9999999999999865
No 337
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=97.74 E-value=2.3e-05 Score=63.88 Aligned_cols=40 Identities=23% Similarity=0.293 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 113 ~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~ 152 (361)
T 3uc3_A 113 FSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGS 152 (361)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCC
Confidence 447788999999999999999887 9999999999999754
No 338
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=97.74 E-value=2.8e-05 Score=60.45 Aligned_cols=39 Identities=28% Similarity=0.466 Sum_probs=35.7
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|++|+|... ++|+|+||+||+++++
T Consensus 103 ~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~ 141 (276)
T 2yex_A 103 PEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDER 141 (276)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTT
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccC
Confidence 47788999999999999999887 9999999999999875
No 339
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=97.74 E-value=1.9e-05 Score=64.54 Aligned_cols=40 Identities=23% Similarity=0.429 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 124 ~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~ 163 (371)
T 2xrw_A 124 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSD 163 (371)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCC
Confidence 347788899999999999999987 9999999999999875
No 340
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=97.73 E-value=2e-05 Score=64.29 Aligned_cols=40 Identities=25% Similarity=0.493 Sum_probs=35.8
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 125 ~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~ 164 (362)
T 2bdw_A 125 YSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASK 164 (362)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecC
Confidence 347788999999999999999987 9999999999999753
No 341
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.73 E-value=2.3e-05 Score=69.35 Aligned_cols=40 Identities=28% Similarity=0.573 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.|..+..++.+++.|+.|+|... |+|||+||+||+++++
T Consensus 179 l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~ 218 (681)
T 2pzi_A 179 LPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE 218 (681)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC
Confidence 348899999999999999999987 9999999999999864
No 342
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=97.73 E-value=2.8e-05 Score=62.54 Aligned_cols=38 Identities=34% Similarity=0.565 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+.....++.+++.|++|||... ++|||+||+||+++.+
T Consensus 167 ~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~ 204 (345)
T 3hko_A 167 EKLISNIMRQIFSALHYLHNQG---ICHRDIKPENFLFSTN 204 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCS
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEecC
Confidence 4566789999999999999987 9999999999999754
No 343
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=97.73 E-value=2.9e-05 Score=60.68 Aligned_cols=40 Identities=25% Similarity=0.493 Sum_probs=35.8
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 102 ~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~ 141 (284)
T 3kk8_A 102 YSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASK 141 (284)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecC
Confidence 347788999999999999999987 9999999999999753
No 344
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=97.73 E-value=1.8e-05 Score=69.15 Aligned_cols=40 Identities=20% Similarity=0.462 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.|..+..++.+++.|++|||... ++|||+||+||+++++
T Consensus 433 l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~ 472 (613)
T 2ozo_A 433 IPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNR 472 (613)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEET
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCC
Confidence 348899999999999999999987 9999999999999865
No 345
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=97.72 E-value=2.1e-05 Score=63.67 Aligned_cols=40 Identities=28% Similarity=0.490 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 123 ~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~ 162 (353)
T 3coi_A 123 FSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNED 162 (353)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCC
Confidence 347788999999999999999987 9999999999999875
No 346
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=97.72 E-value=2.2e-05 Score=61.82 Aligned_cols=40 Identities=25% Similarity=0.474 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 100 ~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~ 139 (299)
T 2r3i_A 100 IPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTE 139 (299)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCC
Confidence 347788899999999999999987 9999999999999875
No 347
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=97.72 E-value=3e-05 Score=60.54 Aligned_cols=40 Identities=23% Similarity=0.460 Sum_probs=36.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 105 ~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~ 144 (283)
T 3bhy_A 105 LTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDK 144 (283)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecC
Confidence 447889999999999999999887 9999999999999764
No 348
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=97.72 E-value=2.1e-05 Score=65.01 Aligned_cols=36 Identities=28% Similarity=0.504 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceee
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill 216 (220)
.+.....++.+++.|+.|||... |+|||+||+||++
T Consensus 126 ~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll 161 (405)
T 3rgf_A 126 PRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILV 161 (405)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEE
Confidence 47788999999999999999987 9999999999999
No 349
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=97.72 E-value=2.8e-05 Score=62.13 Aligned_cols=38 Identities=26% Similarity=0.294 Sum_probs=34.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
-.+.....++.+++.|++|+|... ++|||+||+||+++
T Consensus 146 l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~ 183 (320)
T 3a99_A 146 LQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILID 183 (320)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEe
Confidence 347788899999999999999887 99999999999998
No 350
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=97.72 E-value=2.9e-05 Score=61.95 Aligned_cols=37 Identities=27% Similarity=0.394 Sum_probs=34.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceee
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill 216 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||++
T Consensus 109 ~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll 145 (319)
T 4euu_A 109 LPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMR 145 (319)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEE
Confidence 458889999999999999999987 9999999999998
No 351
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=97.72 E-value=2.8e-05 Score=64.09 Aligned_cols=39 Identities=28% Similarity=0.502 Sum_probs=35.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
-.+.....++.+++.|++|||... ++|||+||+||+++.
T Consensus 146 l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~ 184 (387)
T 1kob_A 146 MSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCET 184 (387)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEec
Confidence 347889999999999999999887 999999999999974
No 352
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=97.72 E-value=2.3e-05 Score=62.52 Aligned_cols=40 Identities=30% Similarity=0.563 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 117 ~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~ 156 (326)
T 1blx_A 117 VPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSS 156 (326)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCC
Confidence 347888999999999999999987 9999999999999865
No 353
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=97.72 E-value=2.2e-05 Score=62.84 Aligned_cols=38 Identities=26% Similarity=0.509 Sum_probs=35.2
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
.+..+..++.+++.|+.|||... ++|||+||+||+++.
T Consensus 138 ~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~ 175 (327)
T 2yfx_A 138 AMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC 175 (327)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESC
T ss_pred cHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEec
Confidence 47789999999999999999987 999999999999984
No 354
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=97.71 E-value=1.5e-05 Score=67.10 Aligned_cols=39 Identities=31% Similarity=0.565 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|++|+|... ++|||+||+||+++++
T Consensus 278 ~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~ 316 (452)
T 1fmk_A 278 RLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGEN 316 (452)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGG
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCC
Confidence 37788999999999999999987 9999999999999764
No 355
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=97.71 E-value=2.4e-05 Score=62.86 Aligned_cols=38 Identities=21% Similarity=0.440 Sum_probs=34.8
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
..+.....++.+++.|+.|+|... ++|||+||+||+++
T Consensus 129 ~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~ 166 (329)
T 3gbz_A 129 VSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLS 166 (329)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEe
Confidence 447788999999999999999987 99999999999994
No 356
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=97.71 E-value=2.3e-05 Score=64.12 Aligned_cols=40 Identities=28% Similarity=0.490 Sum_probs=36.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 141 ~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~ 180 (371)
T 4exu_A 141 FSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNED 180 (371)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCC
Confidence 447888999999999999999987 9999999999999875
No 357
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=97.71 E-value=4.3e-05 Score=61.86 Aligned_cols=38 Identities=32% Similarity=0.518 Sum_probs=34.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
-.+.....++.+++.|++|+|... ++|||+||+||++.
T Consensus 113 ~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~ 150 (342)
T 2qr7_A 113 FSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYV 150 (342)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEES
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEe
Confidence 447788999999999999999987 99999999999974
No 358
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=97.71 E-value=1.7e-05 Score=61.40 Aligned_cols=40 Identities=28% Similarity=0.455 Sum_probs=36.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 101 ~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~ 140 (267)
T 3t9t_A 101 FAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGEN 140 (267)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCC
Confidence 458888999999999999999987 9999999999999754
No 359
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=97.69 E-value=3.3e-05 Score=63.01 Aligned_cols=40 Identities=38% Similarity=0.684 Sum_probs=36.2
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDENM 220 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~ 220 (220)
.+.....++.+++.|+.|+|... ++|||+||+||++++++
T Consensus 198 ~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~ 237 (365)
T 2y7j_A 198 SEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNM 237 (365)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTC
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCC
Confidence 37788999999999999999987 99999999999998763
No 360
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=97.69 E-value=3.2e-05 Score=64.40 Aligned_cols=38 Identities=26% Similarity=0.564 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
.+.....++.+++.|+.|||... ++|||+||+||+++.
T Consensus 237 ~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~ 274 (419)
T 3i6u_A 237 KEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSS 274 (419)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESS
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEec
Confidence 48888999999999999999887 999999999999964
No 361
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=97.69 E-value=2.6e-05 Score=62.62 Aligned_cols=40 Identities=20% Similarity=0.493 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 121 ~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~ 160 (331)
T 4aaa_A 121 LDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQS 160 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCC
Confidence 448889999999999999999987 9999999999999865
No 362
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=97.69 E-value=1.9e-05 Score=66.05 Aligned_cols=35 Identities=29% Similarity=0.528 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 181 DMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 181 ~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
....++.+++.|++|||... ++|||+||+||+++.
T Consensus 116 ~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~ 150 (434)
T 2rio_A 116 NPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVST 150 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEC
T ss_pred hHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEec
Confidence 45789999999999999887 999999999999975
No 363
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=97.69 E-value=3.6e-05 Score=61.98 Aligned_cols=39 Identities=36% Similarity=0.611 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHHHHHHHhh-CCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHH-DHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~-~~~~~i~h~dlk~~nill~~~ 219 (220)
.+..+..++.+++.|+.|+|. .. ++|||+||+||+++.+
T Consensus 149 ~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 149 PIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILMDKN 188 (348)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEECTT
T ss_pred CHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEEcCC
Confidence 478889999999999999998 66 9999999999999865
No 364
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=97.69 E-value=3.5e-05 Score=61.54 Aligned_cols=40 Identities=25% Similarity=0.523 Sum_probs=35.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 111 ~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~ 150 (322)
T 2ycf_A 111 LKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQ 150 (322)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecC
Confidence 347788889999999999999887 9999999999999753
No 365
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=97.69 E-value=3.3e-05 Score=63.37 Aligned_cols=41 Identities=24% Similarity=0.461 Sum_probs=35.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
..|.....++.+++.|+.|+|.. ..+|+|||+||+||+++.
T Consensus 154 ~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~ 194 (382)
T 2vx3_A 154 VSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCN 194 (382)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESS
T ss_pred CCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEec
Confidence 34888899999999999999953 445999999999999953
No 366
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=97.69 E-value=3.5e-05 Score=62.08 Aligned_cols=39 Identities=26% Similarity=0.543 Sum_probs=35.8
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.
T Consensus 125 l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~ 163 (336)
T 3fhr_A 125 FTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTS 163 (336)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEe
Confidence 458889999999999999999987 999999999999974
No 367
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=97.68 E-value=3.7e-05 Score=60.73 Aligned_cols=41 Identities=24% Similarity=0.518 Sum_probs=37.0
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 115 ~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~ 155 (303)
T 3a7i_A 115 PLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEH 155 (303)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCC
Confidence 3458889999999999999999987 9999999999999865
No 368
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=97.68 E-value=1.8e-05 Score=68.08 Aligned_cols=38 Identities=32% Similarity=0.577 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
+.....++.+++.||+|||... ++|||||++||+++++
T Consensus 362 ~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~ 399 (535)
T 2h8h_A 362 LPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGEN 399 (535)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGG
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCC
Confidence 7788999999999999999987 9999999999999764
No 369
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=97.67 E-value=2.8e-05 Score=61.31 Aligned_cols=40 Identities=20% Similarity=0.376 Sum_probs=36.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 114 ~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~ 153 (302)
T 2j7t_A 114 LTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLE 153 (302)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCC
Confidence 457889999999999999999987 9999999999999865
No 370
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=97.67 E-value=1.7e-05 Score=62.21 Aligned_cols=40 Identities=25% Similarity=0.466 Sum_probs=36.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+..+..++.+++.|+.|+|... ++|||+||+||+++++
T Consensus 108 ~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~ 147 (288)
T 3kfa_A 108 VSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGEN 147 (288)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGG
T ss_pred ccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCC
Confidence 448888999999999999999987 9999999999999764
No 371
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=97.67 E-value=3.2e-05 Score=60.72 Aligned_cols=40 Identities=28% Similarity=0.392 Sum_probs=35.8
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
..+.....++.+++.|+.|+|.. .++++|||+||+||+++
T Consensus 126 ~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~ 165 (290)
T 1t4h_A 126 MKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFIT 165 (290)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEES
T ss_pred CCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEE
Confidence 44788899999999999999987 46799999999999997
No 372
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=97.67 E-value=4.2e-05 Score=59.55 Aligned_cols=37 Identities=41% Similarity=0.548 Sum_probs=34.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceee
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill 216 (220)
-.+.....++.+++.|++|+|... ++|||+||+||++
T Consensus 103 ~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~ 139 (277)
T 3f3z_A 103 FRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLF 139 (277)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEE
Confidence 347888999999999999999987 9999999999999
No 373
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=97.66 E-value=2.9e-05 Score=61.60 Aligned_cols=39 Identities=28% Similarity=0.429 Sum_probs=35.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
..+.....++.+++.|++|+|... ++|||+||+||+++.
T Consensus 117 ~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~ 155 (320)
T 2i6l_A 117 LLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINT 155 (320)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEET
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcC
Confidence 447788899999999999999987 999999999999973
No 374
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=97.66 E-value=3.3e-05 Score=61.33 Aligned_cols=38 Identities=29% Similarity=0.341 Sum_probs=35.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
..+.....++.+++.|+.|+|... ++|||+|++||+++
T Consensus 136 ~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~ 173 (312)
T 2iwi_A 136 LGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILID 173 (312)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEe
Confidence 458889999999999999999987 99999999999998
No 375
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=97.66 E-value=4.1e-05 Score=62.76 Aligned_cols=36 Identities=31% Similarity=0.430 Sum_probs=33.6
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceee
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill 216 (220)
.+..+..++.+++.|+.|+|... ++|||+||+||++
T Consensus 185 ~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll 220 (373)
T 2x4f_A 185 TELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILC 220 (373)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEE
Confidence 47788899999999999999987 9999999999998
No 376
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=97.66 E-value=2.6e-05 Score=60.75 Aligned_cols=43 Identities=28% Similarity=0.485 Sum_probs=35.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCC--CCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDH--STLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~--~~~i~h~dlk~~nill~~~ 219 (220)
-+|.....++.+++.|++|+|... ..+++|||+||+||+++++
T Consensus 108 ~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~ 152 (279)
T 2w5a_A 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK 152 (279)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSS
T ss_pred CCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCC
Confidence 458889999999999999999864 2459999999999999865
No 377
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=97.65 E-value=2.9e-05 Score=61.70 Aligned_cols=39 Identities=23% Similarity=0.455 Sum_probs=35.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
-++.....++.+++.|+.|+|... ++|||+||+||++++
T Consensus 127 ~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~~ 165 (319)
T 2y4i_B 127 LDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYDN 165 (319)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC-
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEeC
Confidence 447889999999999999999987 999999999999974
No 378
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=97.65 E-value=4.4e-05 Score=60.03 Aligned_cols=40 Identities=33% Similarity=0.522 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|+|+||+||+++++
T Consensus 121 ~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~ 160 (298)
T 1phk_A 121 LSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDD 160 (298)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCC
Confidence 347788999999999999999887 9999999999999875
No 379
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=97.65 E-value=4.8e-05 Score=61.80 Aligned_cols=38 Identities=29% Similarity=0.578 Sum_probs=34.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhC-CCCceEeeCCCCCceeec
Q 038318 177 RNISDMLNIMIDVALILEYVHHD-HSTLMVHCDLKPDNILID 217 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~-~~~~i~h~dlk~~nill~ 217 (220)
..+.....++.+++.|+.|+|.. . ++|||+||+||+++
T Consensus 128 ~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~ 166 (373)
T 1q8y_A 128 IPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLME 166 (373)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEE
T ss_pred CcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEe
Confidence 44778899999999999999986 6 99999999999994
No 380
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=97.64 E-value=4.7e-05 Score=60.42 Aligned_cols=41 Identities=27% Similarity=0.437 Sum_probs=37.0
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
...+.....++.+++.|+.|+|... ++|+|+||+||+++.+
T Consensus 121 ~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~ 161 (314)
T 3com_A 121 TLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTE 161 (314)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCC
Confidence 3458889999999999999999987 9999999999999865
No 381
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=97.64 E-value=3.3e-05 Score=61.36 Aligned_cols=40 Identities=25% Similarity=0.413 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
..+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 131 ~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~ 170 (309)
T 2h34_A 131 LAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSAD 170 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCC
Confidence 447888999999999999999987 9999999999999865
No 382
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=97.64 E-value=3.2e-05 Score=60.68 Aligned_cols=40 Identities=35% Similarity=0.576 Sum_probs=35.6
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
.-.+.....++.+++.|++|+|... ++|||+||+||++++
T Consensus 120 ~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~ 159 (285)
T 3is5_A 120 ALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQD 159 (285)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEec
Confidence 3447788999999999999999887 999999999999953
No 383
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=97.64 E-value=4.3e-05 Score=61.27 Aligned_cols=39 Identities=31% Similarity=0.604 Sum_probs=35.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
..+.....++.+++.|++|+|... ++|||+||+||+++.
T Consensus 128 ~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~ 166 (327)
T 3lm5_A 128 VSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSS 166 (327)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEec
Confidence 347888999999999999999987 999999999999986
No 384
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=97.62 E-value=2.6e-05 Score=68.75 Aligned_cols=39 Identities=21% Similarity=0.497 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.|..+..++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 489 ~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~ 527 (656)
T 2j0j_A 489 DLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSN 527 (656)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEET
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCC
Confidence 47888999999999999999987 9999999999999865
No 385
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=97.61 E-value=4.3e-05 Score=60.69 Aligned_cols=40 Identities=25% Similarity=0.361 Sum_probs=35.7
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
.-.+..+..++.+++.|+.|+|... ++|||+||+||++++
T Consensus 123 ~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~ 162 (313)
T 3cek_A 123 SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD 162 (313)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC
Confidence 3447788999999999999999987 999999999999964
No 386
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=97.61 E-value=5.2e-05 Score=59.50 Aligned_cols=38 Identities=32% Similarity=0.470 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
.+.....++.+++.|+.|+|... ++|+|+||+||+++.
T Consensus 120 ~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~ 157 (295)
T 2clq_A 120 NEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINT 157 (295)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEET
T ss_pred cHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEEC
Confidence 36778889999999999999987 999999999999975
No 387
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=97.61 E-value=4.7e-06 Score=65.75 Aligned_cols=43 Identities=28% Similarity=0.454 Sum_probs=31.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCC-----CCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDH-----STLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~-----~~~i~h~dlk~~nill~~~ 219 (220)
-.|..+..++.+++.|+.|+|... ...++|||+||+||+++.+
T Consensus 97 ~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~ 144 (303)
T 3gxj_A 97 VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN 144 (303)
T ss_dssp BCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTT
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCC
Confidence 447788999999999999999321 3449999999999999875
No 388
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=97.61 E-value=5e-05 Score=62.64 Aligned_cols=37 Identities=27% Similarity=0.394 Sum_probs=34.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceee
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill 216 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||++
T Consensus 109 l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll 145 (396)
T 4eut_A 109 LPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMR 145 (396)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEE
Confidence 347888999999999999999987 9999999999998
No 389
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=97.61 E-value=4.2e-05 Score=64.25 Aligned_cols=39 Identities=23% Similarity=0.349 Sum_probs=35.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
-.+.....++.+++.|+.|+|... |+|||+||+||+++.
T Consensus 107 ~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~ 145 (444)
T 3soa_A 107 YSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLAS 145 (444)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESB
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEec
Confidence 447788899999999999999987 999999999999974
No 390
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=97.60 E-value=3.2e-05 Score=60.18 Aligned_cols=40 Identities=28% Similarity=0.550 Sum_probs=36.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|+|+||+||+++.+
T Consensus 108 ~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~ 147 (276)
T 2h6d_A 108 VEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAH 147 (276)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCC
Confidence 347788999999999999999987 9999999999999865
No 391
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=97.59 E-value=5e-05 Score=61.45 Aligned_cols=42 Identities=21% Similarity=0.320 Sum_probs=34.9
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
...+.....++.+++.|+.|+|.. ...++|||+||+||+++.
T Consensus 125 ~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~ 166 (360)
T 3e3p_A 125 APPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNE 166 (360)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEET
T ss_pred CCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeC
Confidence 344778888999999999999932 334999999999999985
No 392
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=97.59 E-value=4.4e-05 Score=60.89 Aligned_cols=40 Identities=25% Similarity=0.343 Sum_probs=35.8
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|+|+||+||+++++
T Consensus 126 ~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~ 165 (326)
T 2x7f_A 126 LKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTEN 165 (326)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCC
Confidence 346778899999999999999987 9999999999999865
No 393
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.59 E-value=0.00017 Score=49.99 Aligned_cols=37 Identities=19% Similarity=0.205 Sum_probs=19.6
Q ss_pred CCCEEeccCCcccccCCccccCCCCCCeeeccCCccc
Q 038318 65 SLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLE 101 (220)
Q Consensus 65 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~ 101 (220)
+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555555555333444555555555555555543
No 394
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=97.58 E-value=4.6e-05 Score=60.40 Aligned_cols=40 Identities=23% Similarity=0.429 Sum_probs=36.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 133 ~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~ 172 (310)
T 2wqm_A 133 IPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITAT 172 (310)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCC
Confidence 347788999999999999999987 9999999999999865
No 395
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=97.57 E-value=5.8e-05 Score=64.27 Aligned_cols=41 Identities=34% Similarity=0.598 Sum_probs=36.7
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.-.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 142 ~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~ 182 (504)
T 3q5i_A 142 KFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENK 182 (504)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESST
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecC
Confidence 3458889999999999999999987 9999999999999754
No 396
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=97.57 E-value=4.5e-05 Score=61.87 Aligned_cols=41 Identities=27% Similarity=0.409 Sum_probs=36.0
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhC-CCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHD-HSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~-~~~~i~h~dlk~~nill~~~ 219 (220)
...+.....++.+++.|+.|+|+. . ++|||+||+||+++.+
T Consensus 127 ~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~ 168 (360)
T 3eqc_A 127 RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSR 168 (360)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCC
Confidence 344778899999999999999984 5 9999999999999865
No 397
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=97.56 E-value=5e-05 Score=63.55 Aligned_cols=36 Identities=33% Similarity=0.446 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 179 ISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 179 w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
+.....++.+++.|+.|+|+.. |+|||+||+||+++
T Consensus 117 ~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~ 152 (432)
T 3p23_A 117 GLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILIS 152 (432)
T ss_dssp SSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEEC
T ss_pred chhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEe
Confidence 4456789999999999999987 99999999999995
No 398
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=97.56 E-value=4.4e-05 Score=60.56 Aligned_cols=40 Identities=28% Similarity=0.457 Sum_probs=35.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhC-CCCceEeeCCCCCceeecCC
Q 038318 177 RNISDMLNIMIDVALILEYVHHD-HSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~-~~~~i~h~dlk~~nill~~~ 219 (220)
-.+.....++.+++.|+.|+|.. . ++|||+||+||+++.+
T Consensus 121 ~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~ 161 (318)
T 2dyl_A 121 IPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDER 161 (318)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCC
Confidence 44778889999999999999984 5 9999999999999865
No 399
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=97.56 E-value=6.4e-05 Score=63.84 Aligned_cols=39 Identities=36% Similarity=0.566 Sum_probs=35.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
..+.....++.+++.|+.|+|... ++|||+||+||+++.
T Consensus 133 ~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~ 171 (494)
T 3lij_A 133 FNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLES 171 (494)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeC
Confidence 447788899999999999999987 999999999999965
No 400
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=97.55 E-value=4.1e-05 Score=61.21 Aligned_cols=41 Identities=24% Similarity=0.388 Sum_probs=36.5
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhC-CCCceEeeCCCCCceeecCC
Q 038318 176 NRNISDMLNIMIDVALILEYVHHD-HSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~-~~~~i~h~dlk~~nill~~~ 219 (220)
...+.....++.+++.|+.|+|+. . ++|||+||+||+++.+
T Consensus 121 ~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~ 162 (327)
T 3aln_A 121 VIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRS 162 (327)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETT
T ss_pred cCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCC
Confidence 344788899999999999999986 6 9999999999999865
No 401
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=97.55 E-value=5.4e-05 Score=65.18 Aligned_cols=34 Identities=26% Similarity=0.536 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 182 MLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 182 r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
+..++.+++.|++|+|... |+|||+||+||++++
T Consensus 433 ~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~ 466 (540)
T 3en9_A 433 NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK 466 (540)
T ss_dssp CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS
T ss_pred HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC
Confidence 5688999999999999887 999999999999975
No 402
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=97.54 E-value=5.5e-05 Score=61.31 Aligned_cols=39 Identities=28% Similarity=0.506 Sum_probs=35.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.
T Consensus 145 ~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~ 183 (349)
T 2w4o_A 145 YSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYAT 183 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEec
Confidence 447888999999999999999987 999999999999964
No 403
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.52 E-value=0.00017 Score=49.99 Aligned_cols=58 Identities=17% Similarity=0.190 Sum_probs=45.5
Q ss_pred CEEeccCCccc-ccCCccccCCCCCCeeeccCCcccccCCCC-cccccccccccccccCCCC
Q 038318 67 EFLDISNNNLF-GKIPKSFKGLSRLKQLNAAHSKLEEEIPIE-RPLRNILAQSFIWNYTLCG 126 (220)
Q Consensus 67 ~~L~ls~N~l~-~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~-~~~~~l~~l~~~~n~~l~~ 126 (220)
..++.+++.++ ..+|..+. .+++.|+|++|+|+...+.. ..+++++.+++.+||+.|.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~Cd 70 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCD 70 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCS
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeecc
Confidence 47888898886 36676543 46999999999999543333 6788899999999999985
No 404
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=97.51 E-value=8.2e-05 Score=62.91 Aligned_cols=39 Identities=33% Similarity=0.577 Sum_probs=35.4
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeec
Q 038318 176 NRNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILID 217 (220)
Q Consensus 176 ~~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 217 (220)
.-.+.....++.+++.|+.|+|... ++|||+||+||+++
T Consensus 122 ~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~ 160 (484)
T 3nyv_A 122 RFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLE 160 (484)
T ss_dssp CCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEES
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEe
Confidence 3457888999999999999999987 99999999999995
No 405
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.49 E-value=1.2e-05 Score=65.82 Aligned_cols=93 Identities=15% Similarity=0.132 Sum_probs=64.6
Q ss_pred CCCCCCCceecCC--CccCCc-----cChhh--hccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccC
Q 038318 3 GSLTYLRTPHLGS--NNLTSS-----ISLSL--WNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISN 73 (220)
Q Consensus 3 ~~l~~L~~L~Ls~--n~l~g~-----~p~~~--~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~ 73 (220)
..+++|+.|+|+. |...|. +...+ ..+++|++|+|++|.+....+..+.. ...+++|++|+++.
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~-------a~~~~~L~~LdLs~ 288 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLE-------SDILPQLETMDISA 288 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHH-------CSSGGGCSEEECCS
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHh-------CccCCCCCEEECCC
Confidence 3689999999863 332222 11122 35789999999999887443333321 12578999999999
Q ss_pred Cccccc----CCccccCCCCCCeeeccCCcccc
Q 038318 74 NNLFGK----IPKSFKGLSRLKQLNAAHSKLEE 102 (220)
Q Consensus 74 N~l~~~----~p~~~~~l~~L~~l~l~~n~l~~ 102 (220)
|.+++. ++..+..+++|+.|+++.|.++.
T Consensus 289 n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 289 GVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp SCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 999863 34445667999999999998874
No 406
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=97.48 E-value=7.8e-05 Score=58.43 Aligned_cols=39 Identities=36% Similarity=0.577 Sum_probs=35.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||+++.
T Consensus 118 ~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~ 156 (287)
T 2wei_A 118 FSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLES 156 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEec
Confidence 447788999999999999999987 999999999999965
No 407
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=97.45 E-value=7.4e-05 Score=63.30 Aligned_cols=39 Identities=36% Similarity=0.577 Sum_probs=35.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecC
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 218 (220)
-.+.....++.+++.|+.|+|... |+|||+||+||+++.
T Consensus 118 ~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~ 156 (486)
T 3mwu_A 118 FSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLES 156 (486)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEec
Confidence 447788999999999999999987 999999999999953
No 408
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=97.39 E-value=0.00011 Score=58.03 Aligned_cols=37 Identities=32% Similarity=0.546 Sum_probs=33.8
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceee
Q 038318 177 RNISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILI 216 (220)
Q Consensus 177 ~~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill 216 (220)
-.+.....++.+++.|+.|+|... ++|||+||+||++
T Consensus 103 ~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~ 139 (304)
T 2jam_A 103 YTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLY 139 (304)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEE
Confidence 347788899999999999999987 9999999999999
No 409
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=97.36 E-value=8.4e-05 Score=61.24 Aligned_cols=36 Identities=25% Similarity=0.393 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 181 DMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 181 ~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
....++.+++.++.|+|..+ ++|||+||.|||++++
T Consensus 206 ~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 206 DPASLYADLIALILRLAKHG---LIHGDFNEFNILIREE 241 (397)
T ss_dssp CHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCC
Confidence 34567889999999999887 9999999999999754
No 410
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=97.19 E-value=0.0002 Score=63.03 Aligned_cols=39 Identities=28% Similarity=0.653 Sum_probs=35.2
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCceEeeCCCCCceeecCC
Q 038318 178 NISDMLNIMIDVALILEYVHHDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 178 ~w~~r~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~ 219 (220)
.+.....++.+++.|+.|+|... ++|||+||+||+++.+
T Consensus 119 se~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~ 157 (676)
T 3qa8_A 119 KEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPG 157 (676)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecC
Confidence 36788899999999999999987 9999999999999854
No 411
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.08 E-value=0.0017 Score=53.29 Aligned_cols=94 Identities=13% Similarity=0.202 Sum_probs=58.5
Q ss_pred CCCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCC-hhhhcCccC-----------------------
Q 038318 1 MLGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLP-SNIEKLKVL----------------------- 56 (220)
Q Consensus 1 ~l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L----------------------- 56 (220)
||.++++|+.+.|..+ ++..-...|.++++|+.+++..+ ++ .++ ..+..+.+|
T Consensus 66 AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~ 142 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VK-MIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFK 142 (394)
T ss_dssp TTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCS
T ss_pred HhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ce-EccchhhcccccchhhcccCceeeecceeeeccccc
Confidence 5778888888888644 66233456788888888888754 33 232 233333332
Q ss_pred ------------hhhhcCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCC
Q 038318 57 ------------VDCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHS 98 (220)
Q Consensus 57 ------------p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n 98 (220)
..+|.++.+|+.+.+.++..+ .....|.++.+|+.+++..|
T Consensus 143 ~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~ 195 (394)
T 4fs7_A 143 EITIPEGVTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN 195 (394)
T ss_dssp EEECCTTCCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT
T ss_pred ccccCccccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC
Confidence 345667777887777655432 34456677777777777654
No 412
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.07 E-value=8.4e-05 Score=54.33 Aligned_cols=94 Identities=10% Similarity=0.059 Sum_probs=61.8
Q ss_pred cChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCc-ccccCCccccCC----CCCCeeecc
Q 038318 22 ISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNN-LFGKIPKSFKGL----SRLKQLNAA 96 (220)
Q Consensus 22 ~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~-l~~~~p~~~~~l----~~L~~l~l~ 96 (220)
+|.....-..|+.||++++.++. .++. .+..+++|++|+++++. ++..--..+..+ ++|++|+++
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd---~GL~-------~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls 122 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMS---IGFD-------HMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEII 122 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCG---GGGG-------GGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEE
T ss_pred CCcccCCCceEeEEeCcCCCccH---HHHH-------HhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcC
Confidence 34433233469999999998762 2232 35688999999999985 664433445554 369999999
Q ss_pred CCc-ccccCCCC-cccccccccccccccCCC
Q 038318 97 HSK-LEEEIPIE-RPLRNILAQSFIWNYTLC 125 (220)
Q Consensus 97 ~n~-l~~~~p~~-~~~~~l~~l~~~~n~~l~ 125 (220)
+|. ++..--.. ..+++|+.+++++.+.+.
T Consensus 123 ~C~~ITD~Gl~~L~~~~~L~~L~L~~c~~It 153 (176)
T 3e4g_A 123 SCGNVTDKGIIALHHFRNLKYLFLSDLPGVK 153 (176)
T ss_dssp SCTTCCHHHHHHGGGCTTCCEEEEESCTTCC
T ss_pred CCCcCCHHHHHHHhcCCCCCEEECCCCCCCC
Confidence 974 65321111 457888888887765443
No 413
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.00 E-value=0.0027 Score=52.15 Aligned_cols=106 Identities=19% Similarity=0.300 Sum_probs=61.3
Q ss_pred CCCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccC
Q 038318 1 MLGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKI 80 (220)
Q Consensus 1 ~l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~ 80 (220)
+|.++.+|+.+.+.++..+ .-...|.++++|+.+.+.. .++ .+++. .|.++.+|+.+++..+ ++..-
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~~-~i~-~I~~~---------aF~~c~~L~~i~lp~~-v~~I~ 326 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFSS-RIT-ELPES---------VFAGCISLKSIDIPEG-ITQIL 326 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECCT-TCC-EECTT---------TTTTCTTCCEEECCTT-CCEEC
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCCC-ccc-ccCce---------eecCCCCcCEEEeCCc-ccEeh
Confidence 3566777777777655433 3345566777777777753 343 44442 4666677777777654 44333
Q ss_pred CccccCCCCCCeeeccCCcccccCCCC--cccccccccccccc
Q 038318 81 PKSFKGLSRLKQLNAAHSKLEEEIPIE--RPLRNILAQSFIWN 121 (220)
Q Consensus 81 p~~~~~l~~L~~l~l~~n~l~~~~p~~--~~~~~l~~l~~~~n 121 (220)
..+|.++.+|+.+.+..+ ++ .+... ....+|+.+++.++
T Consensus 327 ~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 327 DDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp TTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSC
T ss_pred HhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCc
Confidence 456777777777777543 33 23322 34556666666554
No 414
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.90 E-value=0.00034 Score=52.03 Aligned_cols=88 Identities=15% Similarity=0.158 Sum_probs=47.7
Q ss_pred CCCCCceecCCC-ccCCc----cChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCccccc
Q 038318 5 LTYLRTPHLGSN-NLTSS----ISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGK 79 (220)
Q Consensus 5 l~~L~~L~Ls~n-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~ 79 (220)
=+.|+.|+|++| ++... +-..+..-+.|+.|+|++|++...--..+. +.+..-+.|++|+|++|.++..
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA------~aL~~N~tL~~L~L~~N~Ig~~ 113 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLI------ELIETSPSLRVLNVESNFLTPE 113 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHH------HHHHHCSSCCEEECCSSBCCHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHH------HHHhcCCccCeEecCCCcCCHH
Confidence 356777777764 55421 233445556677777777776521111111 1334445677777777777532
Q ss_pred C----CccccCCCCCCeeeccCC
Q 038318 80 I----PKSFKGLSRLKQLNAAHS 98 (220)
Q Consensus 80 ~----p~~~~~l~~L~~l~l~~n 98 (220)
- -+.+..-+.|+.|++++|
T Consensus 114 Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 114 LLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHHHhhCCceeEEECCCC
Confidence 1 123344455777777654
No 415
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.76 E-value=0.0027 Score=52.12 Aligned_cols=104 Identities=12% Similarity=0.117 Sum_probs=69.3
Q ss_pred CCCCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccC
Q 038318 1 MLGSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKI 80 (220)
Q Consensus 1 ~l~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~ 80 (220)
+|.++++|+.+.+. +.++..-...|.++.+|+.+++..+ ++ .+.+ .+|.++.+|+.+.+..+ ++..-
T Consensus 283 aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~---------~aF~~C~~L~~i~ip~s-v~~I~ 349 (394)
T 4gt6_A 283 AFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILD---------DAFAGCEQLERIAIPSS-VTKIP 349 (394)
T ss_dssp TTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECT---------TTTTTCTTCCEEEECTT-CCBCC
T ss_pred ccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehH---------hHhhCCCCCCEEEECcc-cCEEh
Confidence 46788999999996 4566233456888999999999865 44 4544 25788899999999755 55344
Q ss_pred CccccCCCCCCeeeccCCcccccCCCCcccccccccccc
Q 038318 81 PKSFKGLSRLKQLNAAHSKLEEEIPIERPLRNILAQSFI 119 (220)
Q Consensus 81 p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~~~l~~l~~~ 119 (220)
..+|.++.+|+.+++.++..... .......|+.+.+.
T Consensus 350 ~~aF~~C~~L~~i~~~~~~~~~~--~~~~~~~L~~i~i~ 386 (394)
T 4gt6_A 350 ESAFSNCTALNNIEYSGSRSQWN--AISTDSGLQNLPVA 386 (394)
T ss_dssp GGGGTTCTTCCEEEESSCHHHHH--TCBCCCCC------
T ss_pred HhHhhCCCCCCEEEECCceeehh--hhhccCCCCEEEeC
Confidence 56899999999999988754321 11233445555443
No 416
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.63 E-value=0.012 Score=47.91 Aligned_cols=61 Identities=13% Similarity=0.164 Sum_probs=41.4
Q ss_pred hhhcCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCCcccccCCCC--ccccccccccccc
Q 038318 58 DCFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHSKLEEEIPIE--RPLRNILAQSFIW 120 (220)
Q Consensus 58 ~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~--~~~~~l~~l~~~~ 120 (220)
..|..+.+|+.+++.++.++..-..+|.++.+|+.+++..+ ++ .+... ....+|+.+.+..
T Consensus 280 ~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 280 LLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp TTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCCCT
T ss_pred cccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEECC
Confidence 35778888999988888777555677888888998888654 43 23332 4445666665543
No 417
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.62 E-value=0.0069 Score=49.66 Aligned_cols=39 Identities=31% Similarity=0.329 Sum_probs=18.6
Q ss_pred hhcCCCCCCEEeccCCcccccCCccccCCCCCCeeeccCC
Q 038318 59 CFGSLTSLEFLDISNNNLFGKIPKSFKGLSRLKQLNAAHS 98 (220)
Q Consensus 59 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~l~~n 98 (220)
+|.++.+|+.+++..+ ++..-..+|.++.+|+.+++..+
T Consensus 315 aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 315 AFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred hhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 3445555555555432 33222344555555555555443
No 418
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.55 E-value=0.001 Score=49.48 Aligned_cols=92 Identities=12% Similarity=0.082 Sum_probs=61.7
Q ss_pred CCCCCCceecCCCccCCc----cChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCC---cc
Q 038318 4 SLTYLRTPHLGSNNLTSS----ISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNN---NL 76 (220)
Q Consensus 4 ~l~~L~~L~Ls~n~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N---~l 76 (220)
.=+.|+.|+|++|++... +...+..=+.|+.|+|+.|.|...=-..+. +.+..-+.|++|++++| .+
T Consensus 68 ~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala------~aL~~N~tL~~L~L~n~~~~~i 141 (197)
T 1pgv_A 68 NSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL------RSTLVTQSIVEFKADNQRQSVL 141 (197)
T ss_dssp TCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH------HHTTTTCCCSEEECCCCSSCCC
T ss_pred hCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH------HHHhhCCceeEEECCCCcCcCc
Confidence 346799999999999833 334455668899999999999732111111 24455567999999865 33
Q ss_pred ccc----CCccccCCCCCCeeeccCCccc
Q 038318 77 FGK----IPKSFKGLSRLKQLNAAHSKLE 101 (220)
Q Consensus 77 ~~~----~p~~~~~l~~L~~l~l~~n~l~ 101 (220)
... +...+..-++|..|+++.|...
T Consensus 142 g~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 142 GNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp CHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred CHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 321 2334555678888988877654
No 419
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.51 E-value=0.0055 Score=49.83 Aligned_cols=84 Identities=14% Similarity=0.121 Sum_probs=52.2
Q ss_pred CCCCCCCceecCCCccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCCcccccCCc
Q 038318 3 GSLTYLRTPHLGSNNLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNNNLFGKIPK 82 (220)
Q Consensus 3 ~~l~~L~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N~l~~~~p~ 82 (220)
.++.+|+.+.+..+ ++..-...|.++++|+.+.+.++.++ .+++ .+|.++.+|+.+++..+ ++..-..
T Consensus 260 ~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~-~I~~---------~aF~~c~~L~~i~lp~~-l~~I~~~ 327 (379)
T 4h09_A 260 QNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIE-TLEP---------RVFMDCVKLSSVTLPTA-LKTIQVY 327 (379)
T ss_dssp TTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCC-EECT---------TTTTTCTTCCEEECCTT-CCEECTT
T ss_pred ceeehhcccccccc-ceeccccccccccccccccccccccc-eehh---------hhhcCCCCCCEEEcCcc-ccEEHHH
Confidence 34444444444332 33122234556666666666666555 4443 36788999999999765 5534456
Q ss_pred cccCCCCCCeeeccCC
Q 038318 83 SFKGLSRLKQLNAAHS 98 (220)
Q Consensus 83 ~~~~l~~L~~l~l~~n 98 (220)
+|.++.+|+.+.+..+
T Consensus 328 aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 328 AFKNCKALSTISYPKS 343 (379)
T ss_dssp TTTTCTTCCCCCCCTT
T ss_pred HhhCCCCCCEEEECCc
Confidence 8999999999887543
No 420
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=95.64 E-value=0.02 Score=31.25 Aligned_cols=27 Identities=15% Similarity=0.154 Sum_probs=13.5
Q ss_pred hhhhhhHhHHHHHHHHHHHHhhhhccc
Q 038318 149 LILKYIFPLIMSIALITILILFCIRCR 175 (220)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~r~~ 175 (220)
+..+++.|+++++++++.++++.||++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhH
Confidence 444555555555555555444444433
No 421
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=95.44 E-value=0.03 Score=30.55 Aligned_cols=28 Identities=14% Similarity=0.125 Sum_probs=13.4
Q ss_pred hhhhhhhHhHHHHHHHHHHHHhhhhccc
Q 038318 148 LLILKYIFPLIMSIALITILILFCIRCR 175 (220)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 175 (220)
.+..+++.|+++++++++.++++.||++
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhh
Confidence 3444445455555555544444444433
No 422
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=95.23 E-value=0.045 Score=28.89 Aligned_cols=23 Identities=26% Similarity=0.273 Sum_probs=14.2
Q ss_pred cchhhhhhhhHhHHHHHHHHHHH
Q 038318 145 KDTLLILKYIFPLIMSIALITIL 167 (220)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~ 167 (220)
.+...+.++++++++.+.+++.+
T Consensus 8 ls~GaIAGiVvG~v~gv~li~~l 30 (38)
T 2k1k_A 8 LTGGEIVAVIFGLLLGAALLLGI 30 (38)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceeeeehHHHHHHHHHHHH
Confidence 34556677777777666555443
No 423
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=94.83 E-value=0.061 Score=29.26 Aligned_cols=28 Identities=11% Similarity=0.197 Sum_probs=13.4
Q ss_pred hhhhhhhhHhHHHHHHHHHHHHhhhhcc
Q 038318 147 TLLILKYIFPLIMSIALITILILFCIRC 174 (220)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 174 (220)
...+++.++|++.++++.+++++|.||+
T Consensus 11 ~~~Ia~~vVGvll~vi~~l~~~~~~RRR 38 (44)
T 2jwa_A 11 LTSIISAVVGILLVVVLGVVFGILIKRR 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHhheehh
Confidence 3345566666544444444444444433
No 424
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=90.18 E-value=0.32 Score=36.94 Aligned_cols=18 Identities=28% Similarity=0.538 Sum_probs=15.6
Q ss_pred CceEeeCCCCCceeecCC
Q 038318 202 TLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 202 ~~i~h~dlk~~nill~~~ 219 (220)
+.++|+|+++.||+++++
T Consensus 183 ~~l~HgDl~~~Nil~~~~ 200 (263)
T 3tm0_A 183 LVFSHGDLGDSNIFVKDG 200 (263)
T ss_dssp EEEECSSCCTTSEEEETT
T ss_pred ceEECCCCCcCcEEEECC
Confidence 569999999999999753
No 425
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=89.35 E-value=0.44 Score=25.36 Aligned_cols=10 Identities=10% Similarity=0.095 Sum_probs=3.9
Q ss_pred hhhhhHhHHH
Q 038318 150 ILKYIFPLIM 159 (220)
Q Consensus 150 ~~~~~~~~~~ 159 (220)
..+++.|++.
T Consensus 16 ~~~vv~Gv~l 25 (41)
T 2k9y_A 16 IGGVAVGVVL 25 (41)
T ss_dssp HHHHHHHHHH
T ss_pred EeehhHHHHH
Confidence 3333434333
No 426
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=88.38 E-value=0.58 Score=37.44 Aligned_cols=18 Identities=33% Similarity=0.573 Sum_probs=16.0
Q ss_pred CceEeeCCCCCceeecCC
Q 038318 202 TLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 202 ~~i~h~dlk~~nill~~~ 219 (220)
+.++|+|+++.||+++++
T Consensus 216 ~~lvHgD~~~~Nil~~~~ 233 (359)
T 3dxp_A 216 TSIVHGDYRLDNLMFHPT 233 (359)
T ss_dssp CEEECSSCSGGGEEECSS
T ss_pred ceEEeCCCCCCcEEEeCC
Confidence 569999999999999864
No 427
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=88.23 E-value=0.35 Score=36.40 Aligned_cols=19 Identities=21% Similarity=0.387 Sum_probs=15.9
Q ss_pred CCceEeeCCCCCceeecCC
Q 038318 201 STLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 201 ~~~i~h~dlk~~nill~~~ 219 (220)
.+.++|+|+++.||+++++
T Consensus 183 ~~~l~HgDl~~~Nil~~~~ 201 (264)
T 1nd4_A 183 DLVVTHGDACLPNIMVENG 201 (264)
T ss_dssp CEEEECSSCCGGGEEEETT
T ss_pred CeEEECCCCCCCcEEEECC
Confidence 3459999999999999754
No 428
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=82.33 E-value=0.49 Score=24.26 Aligned_cols=8 Identities=13% Similarity=0.281 Sum_probs=3.2
Q ss_pred HHHhhhhc
Q 038318 166 ILILFCIR 173 (220)
Q Consensus 166 ~~~~~~~r 173 (220)
.+.++.||
T Consensus 26 ~~~~~iRR 33 (35)
T 1iij_A 26 VVGILIKR 33 (35)
T ss_dssp TTTHHHHH
T ss_pred HhheEEee
Confidence 33444444
No 429
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=78.19 E-value=2.6 Score=32.65 Aligned_cols=19 Identities=32% Similarity=0.550 Sum_probs=16.6
Q ss_pred CCCceEeeCCCCCceeecC
Q 038318 200 HSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 200 ~~~~i~h~dlk~~nill~~ 218 (220)
..+.++|+|+++.||++++
T Consensus 189 ~~~~~~HgD~~~~N~l~~~ 207 (304)
T 3sg8_A 189 YYPCLIHNDFSSDHILFDT 207 (304)
T ss_dssp CCCEEECSCCCGGGEEEET
T ss_pred CCceeEeCCCCcccEEEeC
Confidence 3567999999999999986
No 430
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=77.58 E-value=0.31 Score=28.72 Aligned_cols=24 Identities=13% Similarity=0.077 Sum_probs=14.9
Q ss_pred HHHHHHHhhCCCCceEeeCCCCCc
Q 038318 190 ALILEYVHHDHSTLMVHCDLKPDN 213 (220)
Q Consensus 190 a~~l~~lh~~~~~~i~h~dlk~~n 213 (220)
++.-.+|.+...-.--||.-|..+
T Consensus 45 SQikrlLsEKKTCQC~hr~qk~~~ 68 (70)
T 2klu_A 45 SQIKRLLSEKKTSQSPHRFQKTHS 68 (70)
T ss_dssp SHHHHHHHSSSCCCCCCCCCCCCC
T ss_pred HHHHHHHhccccccCcHHHhhccC
Confidence 444566776655556677776654
No 431
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=68.99 E-value=7.6 Score=19.51 Aligned_cols=23 Identities=13% Similarity=0.246 Sum_probs=12.2
Q ss_pred hhhhhhhHhHHHHHHHHHHHHhh
Q 038318 148 LLILKYIFPLIMSIALITILILF 170 (220)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~ 170 (220)
..+.+++++.+.+.++++..+++
T Consensus 7 gaIaGIVvgdi~~t~~i~~~vy~ 29 (33)
T 2l34_A 7 GVLAGIVVGDLVLTVLIALAVYF 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEeEeHHHHHHHHHHHHHHhh
Confidence 34566666666555554443333
No 432
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=67.00 E-value=6.6 Score=19.78 Aligned_cols=22 Identities=18% Similarity=0.239 Sum_probs=10.8
Q ss_pred hhhhHhHHHHHHHHHHHHhhhh
Q 038318 151 LKYIFPLIMSIALITILILFCI 172 (220)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~ 172 (220)
+.+++|.++++.++..-|++||
T Consensus 10 lt~i~gl~vif~~lg~tflywr 31 (40)
T 2l9u_A 10 LTVIAGLVVIFMMLGGTFLYWR 31 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCceeEEEc
Confidence 3444555544444444555544
No 433
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=64.01 E-value=4.7 Score=31.44 Aligned_cols=18 Identities=33% Similarity=0.431 Sum_probs=15.6
Q ss_pred CCceEeeCCCCCceeecC
Q 038318 201 STLMVHCDLKPDNILIDE 218 (220)
Q Consensus 201 ~~~i~h~dlk~~nill~~ 218 (220)
.+.++|+|+++.||++++
T Consensus 221 ~~~l~HgD~~~~Nil~~~ 238 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGE 238 (346)
T ss_dssp SCCEECSSCSTTSEEECG
T ss_pred cCceecCCCCcccEEEeC
Confidence 566999999999999853
No 434
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=56.10 E-value=14 Score=28.73 Aligned_cols=19 Identities=26% Similarity=0.602 Sum_probs=16.3
Q ss_pred CCceEeeCCCCCceeecCC
Q 038318 201 STLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 201 ~~~i~h~dlk~~nill~~~ 219 (220)
.+.++|+|+++.||+++++
T Consensus 206 ~~~~~H~D~~~~N~l~~~~ 224 (320)
T 3r70_A 206 TPCLVHNDFSANNMIFRNN 224 (320)
T ss_dssp CCEEECSCCSGGGEEEETT
T ss_pred CceeeECCCCCCcEEEECC
Confidence 5678999999999999763
No 435
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=55.69 E-value=15 Score=21.54 Aligned_cols=10 Identities=0% Similarity=0.095 Sum_probs=3.9
Q ss_pred hhHhHHHHHH
Q 038318 153 YIFPLIMSIA 162 (220)
Q Consensus 153 ~~~~~~~~~~ 162 (220)
+++|.++.++
T Consensus 12 ivlGg~~~ll 21 (70)
T 2klu_A 12 IVLGGVAGLL 21 (70)
T ss_dssp HHHHHHHHHH
T ss_pred HHHhHHHHHH
Confidence 3444443333
No 436
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=55.47 E-value=3.8 Score=31.49 Aligned_cols=22 Identities=23% Similarity=0.367 Sum_probs=18.5
Q ss_pred hCCCCceEeeCCCCCceeecCC
Q 038318 198 HDHSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 198 ~~~~~~i~h~dlk~~nill~~~ 219 (220)
....|.++|+|+++.|++.+++
T Consensus 184 ~~~~p~LvHGDlw~gNvl~~~~ 205 (288)
T 3f7w_A 184 DPEPPARIHGDLWNGNVLWQDD 205 (288)
T ss_dssp SCCCCEEECSCCSGGGEEEETT
T ss_pred cCCCCeeeecCCCCCcEEEcCC
Confidence 3446789999999999999875
No 437
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=51.47 E-value=13 Score=22.78 Aligned_cols=11 Identities=9% Similarity=0.217 Sum_probs=4.4
Q ss_pred hhhHhHHHHHH
Q 038318 152 KYIFPLIMSIA 162 (220)
Q Consensus 152 ~~~~~~~~~~~ 162 (220)
++++|++++++
T Consensus 12 ~Iv~gvi~gil 22 (79)
T 2knc_B 12 VVLLSVMGAIL 22 (79)
T ss_dssp HHHHHHHHHHH
T ss_pred hhHHHHHHHHH
Confidence 33444444333
No 438
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=50.50 E-value=18 Score=23.14 Aligned_cols=47 Identities=19% Similarity=0.169 Sum_probs=31.1
Q ss_pred ccCCccChhhhccccCCeeeccCCCCCCCCChhhhcCccChhhhcCCCCCCEEeccCC
Q 038318 17 NLTSSISLSLWNVECILYIDLSSNSLSGFLPSNIEKLKVLVDCFGSLTSLEFLDISNN 74 (220)
Q Consensus 17 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~Lp~~~~~l~~L~~L~ls~N 74 (220)
.++..--..|.++++|+.+.+..+ ++ .+-. .+|.++.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~-~Ig~---------~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IG-LLYD---------GMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SS-CCCT---------TSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hh-eEcH---------HHHhccCCccEEEEcCC
Confidence 444333456888888888887765 23 3333 25778888988888764
No 439
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=47.28 E-value=12 Score=30.44 Aligned_cols=19 Identities=16% Similarity=0.581 Sum_probs=16.6
Q ss_pred CCceEeeCCCCCceeecCC
Q 038318 201 STLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 201 ~~~i~h~dlk~~nill~~~ 219 (220)
.+.++|+|+++.||+++++
T Consensus 231 ~~~liHGDl~~~Nil~~~~ 249 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQD 249 (420)
T ss_dssp CCEEECSCCSGGGEEECSS
T ss_pred CCeEEecCCCCCcEEEeCC
Confidence 5679999999999999764
No 440
>2lp1_A C99; alzheimer'S D membrane protein, transmembrane Pro; NMR {Homo sapiens}
Probab=51.60 E-value=4.3 Score=26.75 Aligned_cols=10 Identities=10% Similarity=0.235 Sum_probs=4.1
Q ss_pred hhhhhHhHHH
Q 038318 150 ILKYIFPLIM 159 (220)
Q Consensus 150 ~~~~~~~~~~ 159 (220)
.++..+++++
T Consensus 32 ~igL~v~~va 41 (122)
T 2lp1_A 32 IIGLMVGGVV 41 (122)
Confidence 3444444433
No 441
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=43.88 E-value=8.5 Score=28.92 Aligned_cols=19 Identities=32% Similarity=0.662 Sum_probs=15.9
Q ss_pred CCceEeeCCCCCceeecCC
Q 038318 201 STLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 201 ~~~i~h~dlk~~nill~~~ 219 (220)
.+.++|+|+.+.||+++++
T Consensus 192 ~~~l~HGDl~~~Nil~~~~ 210 (272)
T 4gkh_A 192 DSVVTHGDFSLDNLIFDEG 210 (272)
T ss_dssp CEEEECSCCCTTSEEEETT
T ss_pred CcEEEcCCCCCCeEEEECC
Confidence 4458999999999999764
No 442
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=39.36 E-value=37 Score=26.29 Aligned_cols=18 Identities=28% Similarity=0.433 Sum_probs=15.9
Q ss_pred CCceEeeCCCCCceeecC
Q 038318 201 STLMVHCDLKPDNILIDE 218 (220)
Q Consensus 201 ~~~i~h~dlk~~nill~~ 218 (220)
.+.++|+|+.+.||++++
T Consensus 182 ~~~lvHgD~~~~Nil~~~ 199 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLP 199 (333)
T ss_dssp CCEEECSCCSGGGEEECT
T ss_pred CCeeEeCCcCcccEEecc
Confidence 567999999999999975
No 443
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=38.84 E-value=27 Score=26.83 Aligned_cols=20 Identities=25% Similarity=0.360 Sum_probs=17.3
Q ss_pred CCCCceEeeCCCCCceeecC
Q 038318 199 DHSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 199 ~~~~~i~h~dlk~~nill~~ 218 (220)
...+.++|+|+.+.|+++++
T Consensus 185 ~~~~~l~HgD~~~~N~l~~~ 204 (288)
T 3d1u_A 185 PEPPARIHGDLWNGNVLWQD 204 (288)
T ss_dssp CCCCEEECSCCSGGGEEEET
T ss_pred CCCCcceECCCCcCcEEEeC
Confidence 44688999999999999875
No 444
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=37.77 E-value=13 Score=29.68 Aligned_cols=18 Identities=33% Similarity=0.650 Sum_probs=15.7
Q ss_pred CceEeeCCCCCceeecCC
Q 038318 202 TLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 202 ~~i~h~dlk~~nill~~~ 219 (220)
+.++|+|+++.|++++++
T Consensus 213 ~~l~HgDl~~~Nil~~~~ 230 (362)
T 3ovc_A 213 RHLVHADFGSNNVLTDNG 230 (362)
T ss_dssp CEEECSSCSSTTEEEETT
T ss_pred cEEEeCCCCCCeEEEeCC
Confidence 679999999999998653
No 445
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=35.79 E-value=13 Score=29.37 Aligned_cols=18 Identities=17% Similarity=0.390 Sum_probs=15.8
Q ss_pred CCceEeeCCCCCceeecC
Q 038318 201 STLMVHCDLKPDNILIDE 218 (220)
Q Consensus 201 ~~~i~h~dlk~~nill~~ 218 (220)
.+.++|+|+.+.||++++
T Consensus 221 ~~~l~HgDl~~~Nil~~~ 238 (357)
T 3ats_A 221 EPVLLWGDARVGNVLYRD 238 (357)
T ss_dssp CCEEECSSCSGGGEEEET
T ss_pred CceEEeCCCCCCeEEEeC
Confidence 467999999999999874
No 446
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=35.44 E-value=11 Score=29.25 Aligned_cols=19 Identities=26% Similarity=0.440 Sum_probs=16.0
Q ss_pred CCceEeeCCCCCceeecCC
Q 038318 201 STLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 201 ~~~i~h~dlk~~nill~~~ 219 (220)
.+.++|+|+.+.||+++++
T Consensus 186 ~~~liHgDl~~~Nil~~~~ 204 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGD 204 (322)
T ss_dssp CEEEECSCCCGGGEEEETT
T ss_pred CcccCCCCCCccCEEEeCC
Confidence 4569999999999998754
No 447
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=35.03 E-value=46 Score=17.64 Aligned_cols=13 Identities=23% Similarity=0.388 Sum_probs=5.4
Q ss_pred hhhhHhHHHHHHH
Q 038318 151 LKYIFPLIMSIAL 163 (220)
Q Consensus 151 ~~~~~~~~~~~~~ 163 (220)
.+++.++++++++
T Consensus 10 ~~Iv~gvi~~ivl 22 (43)
T 2k9j_B 10 LVVLLSVMGAILL 22 (43)
T ss_dssp HHHHHHHHHHHHH
T ss_pred eehHHHHHHHHHH
Confidence 3444444444333
No 448
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=34.95 E-value=14 Score=28.72 Aligned_cols=19 Identities=32% Similarity=0.583 Sum_probs=16.7
Q ss_pred CCCceEeeCCCCCceeecC
Q 038318 200 HSTLMVHCDLKPDNILIDE 218 (220)
Q Consensus 200 ~~~~i~h~dlk~~nill~~ 218 (220)
..+.++|+|+++.|+++++
T Consensus 188 ~~~~~~HgD~~~~N~l~~~ 206 (306)
T 3tdw_A 188 YTPRLIHGDLSPDHFLTNL 206 (306)
T ss_dssp CCCEEECSCCSGGGEEECT
T ss_pred CCCeeEeCCCCcccEEEec
Confidence 4667999999999999986
No 449
>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A
Probab=38.65 E-value=9.4 Score=20.33 Aligned_cols=15 Identities=13% Similarity=0.242 Sum_probs=5.9
Q ss_pred hhhhhHhHHHHHHHH
Q 038318 150 ILKYIFPLIMSIALI 164 (220)
Q Consensus 150 ~~~~~~~~~~~~~~~ 164 (220)
.++..++.+++..++
T Consensus 19 ~iGL~v~gVai~~vI 33 (43)
T 2llm_A 19 IIGLMVGGVVIATVI 33 (43)
Confidence 344443333333333
No 450
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=31.81 E-value=30 Score=27.68 Aligned_cols=19 Identities=26% Similarity=0.536 Sum_probs=16.2
Q ss_pred CCceEeeCCCCCceeecCC
Q 038318 201 STLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 201 ~~~i~h~dlk~~nill~~~ 219 (220)
.+.++|+|+.+.||+++++
T Consensus 226 ~~~L~HGDl~~~Nil~~~~ 244 (397)
T 2olc_A 226 AETLIHGDLHTGSIFASEH 244 (397)
T ss_dssp CCEEECSCCSGGGEEECSS
T ss_pred CCceeeCCCCcCcEEEeCC
Confidence 4679999999999998753
No 451
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=30.90 E-value=35 Score=27.01 Aligned_cols=19 Identities=26% Similarity=0.525 Sum_probs=15.5
Q ss_pred CCceEeeCCCCCceeecCC
Q 038318 201 STLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 201 ~~~i~h~dlk~~nill~~~ 219 (220)
.+.++|+|+++.||+++++
T Consensus 211 ~~~l~HgDl~~~Nil~~~~ 229 (369)
T 3c5i_A 211 TIVFCHNDLQENNIINTNK 229 (369)
T ss_dssp CEEEECSCCCGGGEEECC-
T ss_pred CeEEEeCCCCcccEEecCC
Confidence 4569999999999998753
No 452
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=28.58 E-value=36 Score=26.58 Aligned_cols=20 Identities=15% Similarity=0.230 Sum_probs=17.4
Q ss_pred CCCceEeeCCCCCceeecCC
Q 038318 200 HSTLMVHCDLKPDNILIDEN 219 (220)
Q Consensus 200 ~~~~i~h~dlk~~nill~~~ 219 (220)
..|.++|+|+.+.|++.+.+
T Consensus 205 ~~~~l~HgD~~~~N~l~~~~ 224 (312)
T 3jr1_A 205 PKPSILHGNLWIENCIQVDD 224 (312)
T ss_dssp CCCEEECSSCSGGGEEEETT
T ss_pred CCceeEeCCCCcCcEeecCC
Confidence 46889999999999998764
No 453
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=27.61 E-value=50 Score=25.40 Aligned_cols=17 Identities=35% Similarity=0.462 Sum_probs=14.7
Q ss_pred CCceEeeCCCCCceeec
Q 038318 201 STLMVHCDLKPDNILID 217 (220)
Q Consensus 201 ~~~i~h~dlk~~nill~ 217 (220)
.+.++|+|+++.||+++
T Consensus 194 ~~~l~HgD~~~~Nil~~ 210 (328)
T 1zyl_A 194 TVLRLHGDCHAGNILWR 210 (328)
T ss_dssp CCEECCSSCSGGGEEES
T ss_pred CeeeeeCCCCcccEeEc
Confidence 45689999999999986
No 454
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=22.13 E-value=65 Score=20.10 Aligned_cols=15 Identities=40% Similarity=0.687 Sum_probs=5.7
Q ss_pred hHhHHHHHHHHHHHH
Q 038318 154 IFPLIMSIALITILI 168 (220)
Q Consensus 154 ~~~~~~~~~~~~~~~ 168 (220)
+++++++++++++++
T Consensus 73 ii~~iv~~il~ii~~ 87 (91)
T 3hd7_A 73 ILGVICAIILIIIIV 87 (91)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 334443333333333
No 455
>1pfi_A Major coat protein of PF1 virus; complex(viral coat protein/DNA), helical virus; HET: DC; 3.00A {Pseudomonas phage PF1} SCOP: h.1.4.1 PDB: 1ifn_A 1ifm_A* 1pjf_A 1ql1_A 1ql2_A 1zn5_A 2ifm_A 2ifn_A 2klv_A 2ksj_A 2xkm_A 3ifm_A 4ifm_A
Probab=21.81 E-value=99 Score=16.19 Aligned_cols=19 Identities=21% Similarity=0.356 Sum_probs=8.3
Q ss_pred hhhhhHhHHHHHHHHHHHH
Q 038318 150 ILKYIFPLIMSIALITILI 168 (220)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~ 168 (220)
+.+.++|+.+++.+...++
T Consensus 22 i~~~IVGaLvil~VAGLiy 40 (46)
T 1pfi_A 22 IGGYIVGALVILAVAGLIY 40 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444455444444443333
Done!