Query 038324
Match_columns 84
No_of_seqs 125 out of 1030
Neff 5.6
Searched_HMMs 46136
Date Fri Mar 29 09:50:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038324.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038324hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 99.9 4.6E-25 1E-29 167.7 6.7 61 24-84 23-86 (351)
2 cd01837 SGNH_plant_lipase_like 99.8 9.4E-22 2E-26 145.3 4.0 56 29-84 1-58 (315)
3 PRK15381 pathogenicity island 99.7 1.5E-17 3.2E-22 129.8 3.5 53 25-81 139-191 (408)
4 cd01847 Triacylglycerol_lipase 99.6 1.4E-15 3.1E-20 110.7 2.2 46 28-84 1-46 (281)
5 cd01846 fatty_acyltransferase_ 99.5 9.9E-15 2.1E-19 104.7 3.6 51 30-84 1-51 (270)
6 COG3240 Phospholipase/lecithin 97.7 2.8E-05 6E-10 60.9 3.5 57 24-83 25-83 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 97.2 0.0003 6.5E-09 47.7 3.0 11 31-41 1-11 (234)
8 PF07172 GRP: Glycine rich pro 79.8 1.3 2.7E-05 28.6 1.6 8 1-8 1-8 (95)
9 COG5510 Predicted small secret 68.7 2.2 4.7E-05 24.3 0.5 37 1-44 2-38 (44)
10 cd01839 SGNH_arylesterase_like 62.4 7.9 0.00017 26.4 2.5 11 30-40 1-11 (208)
11 PF10731 Anophelin: Thrombin i 58.6 10 0.00022 23.1 2.2 18 1-18 1-18 (65)
12 PF08282 Hydrolase_3: haloacid 55.8 4.5 9.9E-05 27.3 0.4 18 27-44 201-218 (254)
13 PRK03669 mannosyl-3-phosphogly 52.1 10 0.00022 27.4 1.7 19 27-45 205-223 (271)
14 PRK15396 murein lipoprotein; P 50.1 19 0.00042 22.5 2.5 22 1-22 1-22 (78)
15 cd01821 Rhamnogalacturan_acety 49.1 7.6 0.00017 26.3 0.7 15 29-43 1-15 (198)
16 TIGR01486 HAD-SF-IIB-MPGP mann 48.7 12 0.00026 26.7 1.6 18 28-45 194-211 (256)
17 TIGR02463 MPGP_rel mannosyl-3- 48.4 12 0.00025 25.8 1.5 19 27-45 194-212 (221)
18 PRK10528 multifunctional acyl- 47.1 13 0.00029 25.4 1.6 14 28-41 10-23 (191)
19 PF12710 HAD: haloacid dehalog 45.6 13 0.00029 24.5 1.4 16 27-42 174-189 (192)
20 PRK10513 sugar phosphate phosp 44.6 11 0.00024 26.7 1.0 18 28-45 212-229 (270)
21 TIGR01487 SPP-like sucrose-pho 43.8 13 0.00029 25.5 1.2 17 29-45 164-180 (215)
22 cd00229 SGNH_hydrolase SGNH_hy 43.6 7.7 0.00017 24.0 -0.0 16 31-46 1-16 (187)
23 PRK09973 putative outer membra 41.8 32 0.00069 22.0 2.6 21 1-21 1-21 (85)
24 COG2247 LytB Putative cell wal 41.8 36 0.00078 26.8 3.4 41 1-41 1-41 (337)
25 PRK10976 putative hydrolase; P 40.6 12 0.00026 26.5 0.6 18 28-45 206-223 (266)
26 PRK15126 thiamin pyrimidine py 40.5 15 0.00034 26.2 1.2 18 28-45 204-221 (272)
27 cd01841 NnaC_like NnaC (CMP-Ne 40.4 14 0.00031 24.2 0.9 13 29-41 1-13 (174)
28 TIGR01488 HAD-SF-IB Haloacid D 40.2 11 0.00024 24.7 0.3 15 28-42 158-172 (177)
29 cd01844 SGNH_hydrolase_like_6 40.2 12 0.00025 25.0 0.5 13 30-42 1-13 (177)
30 cd01830 XynE_like SGNH_hydrola 40.1 10 0.00022 25.9 0.2 13 30-42 1-13 (204)
31 PRK01158 phosphoglycolate phos 40.0 16 0.00034 25.2 1.1 18 28-45 173-190 (230)
32 TIGR01485 SPP_plant-cyano sucr 39.1 16 0.00035 25.9 1.1 20 27-46 182-201 (249)
33 cd01832 SGNH_hydrolase_like_1 38.7 13 0.00028 24.5 0.5 11 30-40 1-11 (185)
34 COG0561 Cof Predicted hydrolas 38.3 13 0.00028 26.4 0.5 18 29-46 206-223 (264)
35 PRK10530 pyridoxal phosphate ( 38.1 17 0.00037 25.6 1.1 18 28-45 215-232 (272)
36 cd01825 SGNH_hydrolase_peri1 S 37.5 12 0.00027 24.6 0.2 13 30-42 1-13 (189)
37 TIGR01482 SPP-subfamily Sucros 36.7 19 0.00042 24.6 1.1 18 28-45 165-182 (225)
38 cd01834 SGNH_hydrolase_like_2 36.4 24 0.00052 23.0 1.5 14 29-42 2-15 (191)
39 PLN02954 phosphoserine phospha 36.3 22 0.00048 24.4 1.4 19 28-46 169-187 (224)
40 KOG3035 Isoamyl acetate-hydrol 35.8 23 0.00051 26.6 1.5 16 27-42 5-20 (245)
41 TIGR00099 Cof-subfamily Cof su 35.2 21 0.00046 25.2 1.2 18 28-45 204-221 (256)
42 PLN02382 probable sucrose-phos 34.0 22 0.00047 28.0 1.1 17 28-44 194-210 (413)
43 cd01827 sialate_O-acetylestera 33.4 19 0.0004 23.9 0.6 12 30-41 2-13 (188)
44 PRK00192 mannosyl-3-phosphogly 33.2 27 0.00058 25.2 1.4 17 29-45 208-224 (273)
45 PF05116 S6PP: Sucrose-6F-phos 32.9 16 0.00036 26.4 0.3 18 27-44 180-197 (247)
46 PRK10081 entericidin B membran 32.4 41 0.00089 19.3 1.8 12 33-44 27-38 (48)
47 cd04501 SGNH_hydrolase_like_4 32.3 20 0.00043 23.7 0.6 11 30-40 2-12 (183)
48 cd01427 HAD_like Haloacid deha 31.9 28 0.0006 20.7 1.2 18 27-44 112-129 (139)
49 PF06873 SerH: Cell surface im 31.1 52 0.0011 26.4 2.9 17 1-17 1-17 (403)
50 cd01828 sialate_O-acetylestera 30.7 24 0.00051 23.0 0.8 11 30-40 1-11 (169)
51 TIGR01779 TonB-B12 TonB-depend 30.2 58 0.0013 25.8 3.0 36 1-36 1-36 (614)
52 cd01831 Endoglucanase_E_like E 30.2 20 0.00043 23.7 0.3 11 30-40 1-11 (169)
53 TIGR01484 HAD-SF-IIB HAD-super 29.3 32 0.0007 23.3 1.2 17 28-44 179-195 (204)
54 TIGR02471 sucr_syn_bact_C sucr 29.2 25 0.00055 24.6 0.7 17 29-45 176-192 (236)
55 cd01822 Lysophospholipase_L1_l 28.9 25 0.00055 22.8 0.7 11 30-40 2-12 (177)
56 PF03996 Hema_esterase: Hemagg 28.2 26 0.00056 26.5 0.7 17 29-45 45-64 (258)
57 TIGR02461 osmo_MPG_phos mannos 28.0 34 0.00074 24.3 1.3 17 29-45 200-216 (225)
58 cd01829 SGNH_hydrolase_peri2 S 27.8 29 0.00062 23.2 0.8 12 30-41 1-12 (200)
59 PF05984 Cytomega_UL20A: Cytom 27.2 81 0.0018 20.5 2.7 17 1-17 1-17 (100)
60 PF07365 Toxin_8: Alpha conoto 26.9 21 0.00046 20.3 0.0 11 64-74 7-17 (50)
61 cd04506 SGNH_hydrolase_YpmR_li 25.7 26 0.00055 23.6 0.2 12 30-41 1-12 (204)
62 cd01838 Isoamyl_acetate_hydrol 25.6 28 0.0006 22.9 0.4 12 30-41 1-12 (199)
63 cd01835 SGNH_hydrolase_like_3 25.4 34 0.00074 22.8 0.8 12 29-40 2-13 (193)
64 TIGR01491 HAD-SF-IB-PSPlk HAD- 24.7 32 0.00069 22.9 0.5 19 28-46 163-181 (201)
65 cd01836 FeeA_FeeB_like SGNH_hy 24.4 34 0.00073 22.7 0.6 11 30-40 4-14 (191)
66 PRK03002 prsA peptidylprolyl i 24.0 1.3E+02 0.0029 22.2 3.8 21 1-21 1-21 (285)
67 PRK13582 thrH phosphoserine ph 23.0 51 0.0011 22.2 1.3 13 29-41 145-157 (205)
68 TIGR01544 HAD-SF-IE haloacid d 22.9 54 0.0012 24.8 1.5 18 27-44 210-227 (277)
69 cd01820 PAF_acetylesterase_lik 22.8 49 0.0011 22.8 1.2 13 29-41 33-45 (214)
70 PF01456 Mucin: Mucin-like gly 21.8 86 0.0019 20.5 2.2 19 1-19 1-19 (143)
71 TIGR03333 salvage_mtnX 2-hydro 21.7 58 0.0013 22.5 1.4 18 28-45 156-173 (214)
72 PRK09552 mtnX 2-hydroxy-3-keto 21.5 56 0.0012 22.6 1.3 18 28-45 160-177 (219)
73 COG2755 TesA Lysophospholipase 20.9 50 0.0011 22.4 0.9 14 30-43 10-23 (216)
74 PF09403 FadA: Adhesion protei 20.5 33 0.00072 23.2 0.0 15 1-16 1-15 (126)
75 cd01840 SGNH_hydrolase_yrhL_li 20.4 47 0.001 21.7 0.7 10 31-40 2-11 (150)
76 TIGR00338 serB phosphoserine p 20.4 39 0.00084 23.1 0.3 18 28-45 168-185 (219)
77 TIGR01489 DKMTPPase-SF 2,3-dik 20.3 56 0.0012 21.3 1.0 16 28-43 162-177 (188)
78 PLN02887 hydrolase family prot 20.2 48 0.001 27.5 0.9 18 28-45 523-540 (580)
79 PF12771 SusD-like_2: Starch-b 20.2 34 0.00075 27.1 0.0 11 1-11 1-11 (488)
80 PRK15240 resistance to complem 20.1 94 0.002 21.9 2.2 11 1-11 1-11 (185)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=99.91 E-value=4.6e-25 Score=167.75 Aligned_cols=61 Identities=34% Similarity=0.559 Sum_probs=52.9
Q ss_pred cCCCCCEEEEccccHHHhhhcccc--cCCCCCCCCCCCCCC-CCCccCCCCCcHHHHHHhhcCC
Q 038324 24 VVFKYPAVFNFGDSNSDTGELAAG--LGFTLDPVYGRTHFK-ASSGRFCDGRLIVDFLSKFNNI 84 (84)
Q Consensus 24 ~~~~~~~i~~FGDSlsDtGn~~~~--~~~~~~~Pyg~~~~~-~ptGRfSnG~~~~Dfla~~lgl 84 (84)
...++++||+||||++||||++.. ..+.++||||++|++ +|||||||||+|+|||||.||+
T Consensus 23 ~~~~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl 86 (351)
T PLN03156 23 TCAKVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGL 86 (351)
T ss_pred ccCCCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCC
Confidence 455689999999999999998642 234678999999985 7999999999999999999986
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.84 E-value=9.4e-22 Score=145.32 Aligned_cols=56 Identities=39% Similarity=0.573 Sum_probs=49.8
Q ss_pred CEEEEccccHHHhhhcccccC--CCCCCCCCCCCCCCCCccCCCCCcHHHHHHhhcCC
Q 038324 29 PAVFNFGDSNSDTGELAAGLG--FTLDPVYGRTHFKASSGRFCDGRLIVDFLSKFNNI 84 (84)
Q Consensus 29 ~~i~~FGDSlsDtGn~~~~~~--~~~~~Pyg~~~~~~ptGRfSnG~~~~Dfla~~lgl 84 (84)
++||+||||++||||+..... ..+.||||++|+++|+||||||++|+||||+.+|+
T Consensus 1 ~al~vFGDS~sD~Gn~~~~~~~~~~~~~PyG~~~~~~p~GRfSnG~~~~d~la~~lgl 58 (315)
T cd01837 1 PALFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFPGRPTGRFSNGRLIIDFIAEALGL 58 (315)
T ss_pred CcEEEecCccccCCCccccccccccCCCCCcCcCCCCCCccccCCchhhhhhhhhccC
Confidence 589999999999999875332 35789999999999999999999999999999985
No 3
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=99.68 E-value=1.5e-17 Score=129.82 Aligned_cols=53 Identities=30% Similarity=0.366 Sum_probs=43.5
Q ss_pred CCCCCEEEEccccHHHhhhcccccCCCCCCCCCCCCCCCCCccCCCCCcHHHHHHhh
Q 038324 25 VFKYPAVFNFGDSNSDTGELAAGLGFTLDPVYGRTHFKASSGRFCDGRLIVDFLSKF 81 (84)
Q Consensus 25 ~~~~~~i~~FGDSlsDtGn~~~~~~~~~~~Pyg~~~~~~ptGRfSnG~~~~Dfla~~ 81 (84)
...+++||+||||++||||+.........||||++| +|||||||+|+||||..
T Consensus 139 ~~~~~ai~vFGDSlsDtGnn~y~~t~~~~PPyG~~f----tGRFSNG~v~~DfLA~~ 191 (408)
T PRK15381 139 LGDITRLVFFGDSLSDSLGRMFEKTHHILPSYGQYF----GGRFTNGFTWTEFLSSP 191 (408)
T ss_pred cCCCCeEEEeCCccccCCCccccccccCCCCCCCCC----CcccCCCchhhheeccc
Confidence 357899999999999998865422224589999976 69999999999999964
No 4
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=99.55 E-value=1.4e-15 Score=110.70 Aligned_cols=46 Identities=30% Similarity=0.278 Sum_probs=38.7
Q ss_pred CCEEEEccccHHHhhhcccccCCCCCCCCCCCCCCCCCccCCCCCcHHHHHHhhcCC
Q 038324 28 YPAVFNFGDSNSDTGELAAGLGFTLDPVYGRTHFKASSGRFCDGRLIVDFLSKFNNI 84 (84)
Q Consensus 28 ~~~i~~FGDSlsDtGn~~~~~~~~~~~Pyg~~~~~~ptGRfSnG~~~~Dfla~~lgl 84 (84)
|++||+||||++|+||+.... + +.+|+|||||||+++|++++.+|+
T Consensus 1 ~~~i~vFGDSl~D~Gn~~~~~------~-----~~~~~gRFsnG~~~~d~~~~~~~~ 46 (281)
T cd01847 1 FSRVVVFGDSLSDVGTYNRAG------V-----GAAGGGRFTVNDGSIWSLGVAEGY 46 (281)
T ss_pred CCceEEecCcccccCCCCccc------c-----CCCCCcceecCCcchHHHHHHHHc
Confidence 579999999999999987532 1 246889999999999999998764
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=99.51 E-value=9.9e-15 Score=104.67 Aligned_cols=51 Identities=31% Similarity=0.436 Sum_probs=38.7
Q ss_pred EEEEccccHHHhhhcccccCCCCCCCCCCCCCCCCCccCCCCCcHHHHHHhhcCC
Q 038324 30 AVFNFGDSNSDTGELAAGLGFTLDPVYGRTHFKASSGRFCDGRLIVDFLSKFNNI 84 (84)
Q Consensus 30 ~i~~FGDSlsDtGn~~~~~~~~~~~Pyg~~~~~~ptGRfSnG~~~~Dfla~~lgl 84 (84)
++|+||||++|+||....... ..+|++. ..|+||||||++|+|+||+.+|+
T Consensus 1 ~l~vFGDS~sD~Gn~~~~~~~-~~~~~~~---~~~~grfsnG~~w~d~la~~lg~ 51 (270)
T cd01846 1 RLVVFGDSLSDTGNIFKLTGG-SNPPPSP---PYFGGRFSNGPVWVEYLAATLGL 51 (270)
T ss_pred CeEEeeCccccCCcchhhcCC-CCCCCCC---CCCCCccCCchhHHHHHHHHhCC
Confidence 489999999999998753221 1233333 34679999999999999999874
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=97.74 E-value=2.8e-05 Score=60.89 Aligned_cols=57 Identities=21% Similarity=0.265 Sum_probs=34.8
Q ss_pred cCCCCCEEEEccccHHHhhhcccccCCCCCCCCCCCCCCCCCccCCC--CCcHHHHHHhhcC
Q 038324 24 VVFKYPAVFNFGDSNSDTGELAAGLGFTLDPVYGRTHFKASSGRFCD--GRLIVDFLSKFNN 83 (84)
Q Consensus 24 ~~~~~~~i~~FGDSlsDtGn~~~~~~~~~~~Pyg~~~~~~ptGRfSn--G~~~~Dfla~~lg 83 (84)
..+++..+++||||+||+|+..........+ ..|...|-.++.+ |..+++..++-+|
T Consensus 25 ~~~~~~~l~vfGDSlSDsg~~~~~a~~~~~~---~~~~~~~gp~~~~G~~~~~~~~~p~~lg 83 (370)
T COG3240 25 SLAPFQRLVVFGDSLSDSGNYYRPAGHHGDP---GSYGTIPGPSYQNGNGYTYVTVVPETLG 83 (370)
T ss_pred cccccceEEEeccchhhcccccCcccccCCc---cccccccCCcccCCCceeeeccchhhhc
Confidence 4568999999999999999987543322222 1122233345554 5556666665554
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=97.23 E-value=0.0003 Score=47.67 Aligned_cols=11 Identities=45% Similarity=0.715 Sum_probs=10.4
Q ss_pred EEEccccHHHh
Q 038324 31 VFNFGDSNSDT 41 (84)
Q Consensus 31 i~~FGDSlsDt 41 (84)
|++||||++|.
T Consensus 1 i~~fGDS~td~ 11 (234)
T PF00657_consen 1 IVVFGDSLTDG 11 (234)
T ss_dssp EEEEESHHHHT
T ss_pred CEEEeehhccc
Confidence 68999999998
No 8
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=79.78 E-value=1.3 Score=28.63 Aligned_cols=8 Identities=25% Similarity=0.642 Sum_probs=5.4
Q ss_pred CchhHHHH
Q 038324 1 MTTKILIV 8 (84)
Q Consensus 1 m~~~~~~~ 8 (84)
|++|.+++
T Consensus 1 MaSK~~ll 8 (95)
T PF07172_consen 1 MASKAFLL 8 (95)
T ss_pred CchhHHHH
Confidence 78776554
No 9
>COG5510 Predicted small secreted protein [Function unknown]
Probab=68.67 E-value=2.2 Score=24.28 Aligned_cols=37 Identities=24% Similarity=0.431 Sum_probs=20.5
Q ss_pred CchhHHHHHHHHHHHHhhccccccCCCCCEEEEccccHHHhhhc
Q 038324 1 MTTKILIVQILTLCSIILPKANSVVFKYPAVFNFGDSNSDTGEL 44 (84)
Q Consensus 1 m~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~FGDSlsDtGn~ 44 (84)
||+.+++..++++++.++.+++.. =-+|....+.|..
T Consensus 2 mk~t~l~i~~vll~s~llaaCNT~-------rG~G~DIq~~G~a 38 (44)
T COG5510 2 MKKTILLIALVLLASTLLAACNTM-------RGAGKDIQSGGKA 38 (44)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhh-------hccchhHHHHHHH
Confidence 555555555555555555555432 2356666666654
No 10
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=62.38 E-value=7.9 Score=26.38 Aligned_cols=11 Identities=45% Similarity=0.743 Sum_probs=8.7
Q ss_pred EEEEccccHHH
Q 038324 30 AVFNFGDSNSD 40 (84)
Q Consensus 30 ~i~~FGDSlsD 40 (84)
.|+.||||++.
T Consensus 1 ~I~~~GDSiT~ 11 (208)
T cd01839 1 TILCFGDSNTW 11 (208)
T ss_pred CEEEEecCccc
Confidence 37889999864
No 11
>PF10731 Anophelin: Thrombin inhibitor from mosquito; InterPro: IPR018932 Members of this family are all inhibitors of thrombin, the peptidase that is at the end of the blood coagulation cascade and which creates the clot by cleaving fibrinogen. The interaction between thrombin and fibrinogen involves two different areas of contact - via the thrombin active site and via a second substrate-binding site known as an exosite. The inhibitor acts by blocking the exosite, rather than by interacting with the active site. The inhibitors are from mosquitoes that feed on human blood and which, by inhibiting thrombin, prevent the blood from clotting and keep it flowing.
Probab=58.63 E-value=10 Score=23.08 Aligned_cols=18 Identities=17% Similarity=0.608 Sum_probs=12.8
Q ss_pred CchhHHHHHHHHHHHHhh
Q 038324 1 MTTKILIVQILTLCSIIL 18 (84)
Q Consensus 1 m~~~~~~~~~l~~~~~~~ 18 (84)
|.+|.+++++|.+.++.+
T Consensus 1 MA~Kl~vialLC~aLva~ 18 (65)
T PF10731_consen 1 MASKLIVIALLCVALVAI 18 (65)
T ss_pred CcchhhHHHHHHHHHHHH
Confidence 888988887776655543
No 12
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=55.80 E-value=4.5 Score=27.30 Aligned_cols=18 Identities=33% Similarity=0.512 Sum_probs=14.4
Q ss_pred CCCEEEEccccHHHhhhc
Q 038324 27 KYPAVFNFGDSNSDTGEL 44 (84)
Q Consensus 27 ~~~~i~~FGDSlsDtGn~ 44 (84)
....+++||||.+|.-=.
T Consensus 201 ~~~~~~~~GD~~ND~~Ml 218 (254)
T PF08282_consen 201 SPEDIIAFGDSENDIEML 218 (254)
T ss_dssp SGGGEEEEESSGGGHHHH
T ss_pred ccceeEEeecccccHhHH
Confidence 346899999999997544
No 13
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=52.10 E-value=10 Score=27.37 Aligned_cols=19 Identities=26% Similarity=0.478 Sum_probs=15.3
Q ss_pred CCCEEEEccccHHHhhhcc
Q 038324 27 KYPAVFNFGDSNSDTGELA 45 (84)
Q Consensus 27 ~~~~i~~FGDSlsDtGn~~ 45 (84)
+...++.||||.+|.-=..
T Consensus 205 ~~~~viafGDs~NDi~Ml~ 223 (271)
T PRK03669 205 TRPTTLGLGDGPNDAPLLD 223 (271)
T ss_pred CCceEEEEcCCHHHHHHHH
Confidence 3478999999999986554
No 14
>PRK15396 murein lipoprotein; Provisional
Probab=50.06 E-value=19 Score=22.49 Aligned_cols=22 Identities=23% Similarity=0.333 Sum_probs=13.5
Q ss_pred CchhHHHHHHHHHHHHhhcccc
Q 038324 1 MTTKILIVQILTLCSIILPKAN 22 (84)
Q Consensus 1 m~~~~~~~~~l~~~~~~~~~~~ 22 (84)
|+++.++++.+++.+.++..++
T Consensus 1 m~~~kl~l~av~ls~~LLaGCA 22 (78)
T PRK15396 1 MNRTKLVLGAVILGSTLLAGCS 22 (78)
T ss_pred CchhHHHHHHHHHHHHHHHHcC
Confidence 7776677766666555444443
No 15
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=49.14 E-value=7.6 Score=26.25 Aligned_cols=15 Identities=33% Similarity=0.543 Sum_probs=11.8
Q ss_pred CEEEEccccHHHhhh
Q 038324 29 PAVFNFGDSNSDTGE 43 (84)
Q Consensus 29 ~~i~~FGDSlsDtGn 43 (84)
++|..||||++.-..
T Consensus 1 ~~i~~~GDS~t~G~~ 15 (198)
T cd01821 1 PTIFLAGDSTVADYD 15 (198)
T ss_pred CEEEEEecCCcccCC
Confidence 579999999977443
No 16
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=48.74 E-value=12 Score=26.67 Aligned_cols=18 Identities=33% Similarity=0.320 Sum_probs=15.5
Q ss_pred CCEEEEccccHHHhhhcc
Q 038324 28 YPAVFNFGDSNSDTGELA 45 (84)
Q Consensus 28 ~~~i~~FGDSlsDtGn~~ 45 (84)
...++.||||.+|..-..
T Consensus 194 ~~~~~a~GD~~ND~~Ml~ 211 (256)
T TIGR01486 194 AIKVVGLGDSPNDLPLLE 211 (256)
T ss_pred CceEEEEcCCHhhHHHHH
Confidence 578999999999987765
No 17
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=48.36 E-value=12 Score=25.83 Aligned_cols=19 Identities=21% Similarity=0.239 Sum_probs=14.7
Q ss_pred CCCEEEEccccHHHhhhcc
Q 038324 27 KYPAVFNFGDSNSDTGELA 45 (84)
Q Consensus 27 ~~~~i~~FGDSlsDtGn~~ 45 (84)
....++.||||.+|.--..
T Consensus 194 ~~~~vi~~GD~~NDi~ml~ 212 (221)
T TIGR02463 194 PDVKTLGLGDGPNDLPLLE 212 (221)
T ss_pred CCCcEEEECCCHHHHHHHH
Confidence 3468999999999975443
No 18
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=47.09 E-value=13 Score=25.37 Aligned_cols=14 Identities=29% Similarity=0.287 Sum_probs=12.1
Q ss_pred CCEEEEccccHHHh
Q 038324 28 YPAVFNFGDSNSDT 41 (84)
Q Consensus 28 ~~~i~~FGDSlsDt 41 (84)
-..|+.||||++.-
T Consensus 10 ~~~iv~~GDSit~G 23 (191)
T PRK10528 10 ADTLLILGDSLSAG 23 (191)
T ss_pred CCEEEEEeCchhhc
Confidence 46999999999875
No 19
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=45.63 E-value=13 Score=24.46 Aligned_cols=16 Identities=31% Similarity=0.306 Sum_probs=13.6
Q ss_pred CCCEEEEccccHHHhh
Q 038324 27 KYPAVFNFGDSNSDTG 42 (84)
Q Consensus 27 ~~~~i~~FGDSlsDtG 42 (84)
....++.+|||.+|.-
T Consensus 174 ~~~~~~~iGDs~~D~~ 189 (192)
T PF12710_consen 174 DPDRVIAIGDSINDLP 189 (192)
T ss_dssp TCCEEEEEESSGGGHH
T ss_pred CCCeEEEEECCHHHHH
Confidence 4678999999999963
No 20
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=44.61 E-value=11 Score=26.68 Aligned_cols=18 Identities=22% Similarity=0.386 Sum_probs=14.6
Q ss_pred CCEEEEccccHHHhhhcc
Q 038324 28 YPAVFNFGDSNSDTGELA 45 (84)
Q Consensus 28 ~~~i~~FGDSlsDtGn~~ 45 (84)
...+++||||.+|.-=..
T Consensus 212 ~~~v~afGD~~NDi~Ml~ 229 (270)
T PRK10513 212 PEEVMAIGDQENDIAMIE 229 (270)
T ss_pred HHHEEEECCchhhHHHHH
Confidence 458999999999976554
No 21
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=43.83 E-value=13 Score=25.55 Aligned_cols=17 Identities=29% Similarity=0.382 Sum_probs=14.1
Q ss_pred CEEEEccccHHHhhhcc
Q 038324 29 PAVFNFGDSNSDTGELA 45 (84)
Q Consensus 29 ~~i~~FGDSlsDtGn~~ 45 (84)
..++.||||.+|..-..
T Consensus 164 ~~~i~iGDs~ND~~ml~ 180 (215)
T TIGR01487 164 EEVAAIGDSENDIDLFR 180 (215)
T ss_pred HHEEEECCCHHHHHHHH
Confidence 46999999999976654
No 22
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=43.59 E-value=7.7 Score=23.98 Aligned_cols=16 Identities=19% Similarity=0.229 Sum_probs=12.6
Q ss_pred EEEccccHHHhhhccc
Q 038324 31 VFNFGDSNSDTGELAA 46 (84)
Q Consensus 31 i~~FGDSlsDtGn~~~ 46 (84)
|.++|||+++..+...
T Consensus 1 i~~~GDS~~~g~~~~~ 16 (187)
T cd00229 1 ILVIGDSITAGYGASS 16 (187)
T ss_pred CeeeccccccccCCCC
Confidence 5789999999777553
No 23
>PRK09973 putative outer membrane lipoprotein; Provisional
Probab=41.83 E-value=32 Score=21.97 Aligned_cols=21 Identities=10% Similarity=0.086 Sum_probs=12.7
Q ss_pred CchhHHHHHHHHHHHHhhccc
Q 038324 1 MTTKILIVQILTLCSIILPKA 21 (84)
Q Consensus 1 m~~~~~~~~~l~~~~~~~~~~ 21 (84)
||++.++..+++.++++.+++
T Consensus 1 mk~klll~aviLs~~LLaGCA 21 (85)
T PRK09973 1 MKTIFTVGAVVLATCLLSGCV 21 (85)
T ss_pred CchhHHHHHHHHHHHHHHHcC
Confidence 888877765555444444444
No 24
>COG2247 LytB Putative cell wall-binding domain [Cell envelope biogenesis, outer membrane]
Probab=41.82 E-value=36 Score=26.82 Aligned_cols=41 Identities=15% Similarity=0.156 Sum_probs=22.3
Q ss_pred CchhHHHHHHHHHHHHhhccccccCCCCCEEEEccccHHHh
Q 038324 1 MTTKILIVQILTLCSIILPKANSVVFKYPAVFNFGDSNSDT 41 (84)
Q Consensus 1 m~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~FGDSlsDt 41 (84)
|++...++-..++.++.+++..+.......+++-+|+..|-
T Consensus 1 Mrr~l~lll~~~l~l~s~~av~A~~~~~~~VIlvsDn~aD~ 41 (337)
T COG2247 1 MRRLLMLLLASLLALSSPPAVSAQSQNTTVVILVSDNEADL 41 (337)
T ss_pred CccHHHHHHHHHHHHhcchhhhhhhcCceEEEEecchHHHH
Confidence 55544443222222222333323444556899999999995
No 25
>PRK10976 putative hydrolase; Provisional
Probab=40.60 E-value=12 Score=26.51 Aligned_cols=18 Identities=28% Similarity=0.460 Sum_probs=14.9
Q ss_pred CCEEEEccccHHHhhhcc
Q 038324 28 YPAVFNFGDSNSDTGELA 45 (84)
Q Consensus 28 ~~~i~~FGDSlsDtGn~~ 45 (84)
...+++||||.+|..-..
T Consensus 206 ~~~viafGD~~NDi~Ml~ 223 (266)
T PRK10976 206 LKDCIAFGDGMNDAEMLS 223 (266)
T ss_pred HHHeEEEcCCcccHHHHH
Confidence 468999999999987654
No 26
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=40.47 E-value=15 Score=26.18 Aligned_cols=18 Identities=28% Similarity=0.475 Sum_probs=14.7
Q ss_pred CCEEEEccccHHHhhhcc
Q 038324 28 YPAVFNFGDSNSDTGELA 45 (84)
Q Consensus 28 ~~~i~~FGDSlsDtGn~~ 45 (84)
...+++||||.+|..=..
T Consensus 204 ~~~v~afGD~~NDi~Ml~ 221 (272)
T PRK15126 204 LADCMAFGDAMNDREMLG 221 (272)
T ss_pred HHHeEEecCCHHHHHHHH
Confidence 458999999999976554
No 27
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=40.43 E-value=14 Score=24.16 Aligned_cols=13 Identities=23% Similarity=0.245 Sum_probs=10.4
Q ss_pred CEEEEccccHHHh
Q 038324 29 PAVFNFGDSNSDT 41 (84)
Q Consensus 29 ~~i~~FGDSlsDt 41 (84)
+.|+.||||++.-
T Consensus 1 ~~iv~~GdS~t~~ 13 (174)
T cd01841 1 KNIVFIGDSLFEG 13 (174)
T ss_pred CCEEEEcchhhhc
Confidence 3688999999873
No 28
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=40.25 E-value=11 Score=24.67 Aligned_cols=15 Identities=27% Similarity=0.377 Sum_probs=12.4
Q ss_pred CCEEEEccccHHHhh
Q 038324 28 YPAVFNFGDSNSDTG 42 (84)
Q Consensus 28 ~~~i~~FGDSlsDtG 42 (84)
...++.+|||.+|.-
T Consensus 158 ~~~~~~iGDs~~D~~ 172 (177)
T TIGR01488 158 LKKIIAVGDSVNDLP 172 (177)
T ss_pred HHHEEEEeCCHHHHH
Confidence 457899999999964
No 29
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=40.22 E-value=12 Score=24.98 Aligned_cols=13 Identities=23% Similarity=0.215 Sum_probs=10.3
Q ss_pred EEEEccccHHHhh
Q 038324 30 AVFNFGDSNSDTG 42 (84)
Q Consensus 30 ~i~~FGDSlsDtG 42 (84)
+|..+|||++.-.
T Consensus 1 ~iv~~GDSit~G~ 13 (177)
T cd01844 1 PWVFYGTSISQGA 13 (177)
T ss_pred CEEEEeCchhcCc
Confidence 4789999998743
No 30
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=40.10 E-value=10 Score=25.93 Aligned_cols=13 Identities=38% Similarity=0.542 Sum_probs=10.5
Q ss_pred EEEEccccHHHhh
Q 038324 30 AVFNFGDSNSDTG 42 (84)
Q Consensus 30 ~i~~FGDSlsDtG 42 (84)
.|+.||||+++-.
T Consensus 1 ~iv~~GDSiT~G~ 13 (204)
T cd01830 1 SVVALGDSITDGR 13 (204)
T ss_pred CEEEEecccccCC
Confidence 3788999999844
No 31
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=39.97 E-value=16 Score=25.19 Aligned_cols=18 Identities=28% Similarity=0.300 Sum_probs=14.7
Q ss_pred CCEEEEccccHHHhhhcc
Q 038324 28 YPAVFNFGDSNSDTGELA 45 (84)
Q Consensus 28 ~~~i~~FGDSlsDtGn~~ 45 (84)
...++.||||.+|..-..
T Consensus 173 ~~~~i~~GD~~NDi~m~~ 190 (230)
T PRK01158 173 PEEVAAIGDSENDLEMFE 190 (230)
T ss_pred HHHEEEECCchhhHHHHH
Confidence 357999999999976654
No 32
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=39.06 E-value=16 Score=25.91 Aligned_cols=20 Identities=20% Similarity=0.232 Sum_probs=16.2
Q ss_pred CCCEEEEccccHHHhhhccc
Q 038324 27 KYPAVFNFGDSNSDTGELAA 46 (84)
Q Consensus 27 ~~~~i~~FGDSlsDtGn~~~ 46 (84)
+...+++||||.+|..-...
T Consensus 182 ~~~~~i~~GD~~ND~~ml~~ 201 (249)
T TIGR01485 182 EPSQTLVCGDSGNDIELFEI 201 (249)
T ss_pred CccCEEEEECChhHHHHHHc
Confidence 35689999999999877643
No 33
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=38.67 E-value=13 Score=24.52 Aligned_cols=11 Identities=27% Similarity=0.456 Sum_probs=9.5
Q ss_pred EEEEccccHHH
Q 038324 30 AVFNFGDSNSD 40 (84)
Q Consensus 30 ~i~~FGDSlsD 40 (84)
+|..+|||+++
T Consensus 1 ~i~~~GDSit~ 11 (185)
T cd01832 1 RYVALGDSITE 11 (185)
T ss_pred CeeEecchhhc
Confidence 47899999987
No 34
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=38.32 E-value=13 Score=26.41 Aligned_cols=18 Identities=39% Similarity=0.573 Sum_probs=15.2
Q ss_pred CEEEEccccHHHhhhccc
Q 038324 29 PAVFNFGDSNSDTGELAA 46 (84)
Q Consensus 29 ~~i~~FGDSlsDtGn~~~ 46 (84)
..+++||||.+|..-...
T Consensus 206 ~~v~afGD~~ND~~Ml~~ 223 (264)
T COG0561 206 EEVIAFGDSTNDIEMLEV 223 (264)
T ss_pred HHeEEeCCccccHHHHHh
Confidence 479999999999887653
No 35
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=38.08 E-value=17 Score=25.59 Aligned_cols=18 Identities=33% Similarity=0.475 Sum_probs=14.9
Q ss_pred CCEEEEccccHHHhhhcc
Q 038324 28 YPAVFNFGDSNSDTGELA 45 (84)
Q Consensus 28 ~~~i~~FGDSlsDtGn~~ 45 (84)
...+++||||.+|..-..
T Consensus 215 ~~e~i~~GD~~NDi~m~~ 232 (272)
T PRK10530 215 MKNVVAFGDNFNDISMLE 232 (272)
T ss_pred HHHeEEeCCChhhHHHHH
Confidence 458999999999987654
No 36
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=37.46 E-value=12 Score=24.57 Aligned_cols=13 Identities=23% Similarity=0.373 Sum_probs=10.3
Q ss_pred EEEEccccHHHhh
Q 038324 30 AVFNFGDSNSDTG 42 (84)
Q Consensus 30 ~i~~FGDSlsDtG 42 (84)
+|..+|||++..+
T Consensus 1 ~iv~~GDS~t~g~ 13 (189)
T cd01825 1 RIAQLGDSHIAGD 13 (189)
T ss_pred CeeEecCcccccc
Confidence 4788999999854
No 37
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=36.72 E-value=19 Score=24.56 Aligned_cols=18 Identities=22% Similarity=0.242 Sum_probs=14.3
Q ss_pred CCEEEEccccHHHhhhcc
Q 038324 28 YPAVFNFGDSNSDTGELA 45 (84)
Q Consensus 28 ~~~i~~FGDSlsDtGn~~ 45 (84)
...++.||||.+|.--..
T Consensus 165 ~~~~i~~GD~~NDi~m~~ 182 (225)
T TIGR01482 165 PGETLVCGDSENDIDLFE 182 (225)
T ss_pred HHHEEEECCCHhhHHHHH
Confidence 367999999999965543
No 38
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=36.37 E-value=24 Score=23.01 Aligned_cols=14 Identities=29% Similarity=0.491 Sum_probs=11.7
Q ss_pred CEEEEccccHHHhh
Q 038324 29 PAVFNFGDSNSDTG 42 (84)
Q Consensus 29 ~~i~~FGDSlsDtG 42 (84)
.+|.++|||++..+
T Consensus 2 ~~v~~~GDSit~g~ 15 (191)
T cd01834 2 DRIVFIGNSITDRG 15 (191)
T ss_pred CEEEEeCCChhhcc
Confidence 47899999999954
No 39
>PLN02954 phosphoserine phosphatase
Probab=36.28 E-value=22 Score=24.39 Aligned_cols=19 Identities=21% Similarity=0.379 Sum_probs=14.8
Q ss_pred CCEEEEccccHHHhhhccc
Q 038324 28 YPAVFNFGDSNSDTGELAA 46 (84)
Q Consensus 28 ~~~i~~FGDSlsDtGn~~~ 46 (84)
.+.++++|||.+|.-....
T Consensus 169 ~~~~i~iGDs~~Di~aa~~ 187 (224)
T PLN02954 169 YKTMVMIGDGATDLEARKP 187 (224)
T ss_pred CCceEEEeCCHHHHHhhhc
Confidence 4678889999999877443
No 40
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=35.76 E-value=23 Score=26.65 Aligned_cols=16 Identities=31% Similarity=0.465 Sum_probs=13.5
Q ss_pred CCCEEEEccccHHHhh
Q 038324 27 KYPAVFNFGDSNSDTG 42 (84)
Q Consensus 27 ~~~~i~~FGDSlsDtG 42 (84)
-+++|+.||||++.-+
T Consensus 5 ~rp~i~LFGdSItq~s 20 (245)
T KOG3035|consen 5 MRPRIVLFGDSITQFS 20 (245)
T ss_pred ccccEEEecchhhhhc
Confidence 5789999999988743
No 41
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=35.21 E-value=21 Score=25.17 Aligned_cols=18 Identities=33% Similarity=0.482 Sum_probs=14.8
Q ss_pred CCEEEEccccHHHhhhcc
Q 038324 28 YPAVFNFGDSNSDTGELA 45 (84)
Q Consensus 28 ~~~i~~FGDSlsDtGn~~ 45 (84)
...++.||||.+|..-..
T Consensus 204 ~~~~~~~GD~~nD~~m~~ 221 (256)
T TIGR00099 204 LEDVIAFGDGMNDIEMLE 221 (256)
T ss_pred HHHEEEeCCcHHhHHHHH
Confidence 468999999999976654
No 42
>PLN02382 probable sucrose-phosphatase
Probab=34.05 E-value=22 Score=28.00 Aligned_cols=17 Identities=24% Similarity=0.243 Sum_probs=14.1
Q ss_pred CCEEEEccccHHHhhhc
Q 038324 28 YPAVFNFGDSNSDTGEL 44 (84)
Q Consensus 28 ~~~i~~FGDSlsDtGn~ 44 (84)
...+++||||.+|..=.
T Consensus 194 ~~~~iafGDs~NDleMl 210 (413)
T PLN02382 194 PVNTLVCGDSGNDAELF 210 (413)
T ss_pred hhcEEEEeCCHHHHHHH
Confidence 45899999999997654
No 43
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=33.43 E-value=19 Score=23.85 Aligned_cols=12 Identities=25% Similarity=0.288 Sum_probs=9.9
Q ss_pred EEEEccccHHHh
Q 038324 30 AVFNFGDSNSDT 41 (84)
Q Consensus 30 ~i~~FGDSlsDt 41 (84)
+|..+|||++.-
T Consensus 2 ~i~~~GDSit~G 13 (188)
T cd01827 2 KVACVGNSITEG 13 (188)
T ss_pred eEEEEecccccc
Confidence 578999999873
No 44
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=33.21 E-value=27 Score=25.17 Aligned_cols=17 Identities=29% Similarity=0.358 Sum_probs=14.7
Q ss_pred CEEEEccccHHHhhhcc
Q 038324 29 PAVFNFGDSNSDTGELA 45 (84)
Q Consensus 29 ~~i~~FGDSlsDtGn~~ 45 (84)
..++.||||.+|..-..
T Consensus 208 ~~v~~~GDs~NDi~m~~ 224 (273)
T PRK00192 208 VETIALGDSPNDLPMLE 224 (273)
T ss_pred ceEEEEcCChhhHHHHH
Confidence 78999999999976654
No 45
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=32.85 E-value=16 Score=26.36 Aligned_cols=18 Identities=33% Similarity=0.296 Sum_probs=14.1
Q ss_pred CCCEEEEccccHHHhhhc
Q 038324 27 KYPAVFNFGDSNSDTGEL 44 (84)
Q Consensus 27 ~~~~i~~FGDSlsDtGn~ 44 (84)
+...++++|||-+|..=.
T Consensus 180 ~~~~vl~aGDSgND~~mL 197 (247)
T PF05116_consen 180 PPEQVLVAGDSGNDLEML 197 (247)
T ss_dssp -GGGEEEEESSGGGHHHH
T ss_pred CHHHEEEEeCCCCcHHHH
Confidence 346899999999998654
No 46
>PRK10081 entericidin B membrane lipoprotein; Provisional
Probab=32.36 E-value=41 Score=19.34 Aligned_cols=12 Identities=33% Similarity=0.545 Sum_probs=5.9
Q ss_pred EccccHHHhhhc
Q 038324 33 NFGDSNSDTGEL 44 (84)
Q Consensus 33 ~FGDSlsDtGn~ 44 (84)
-+|....-.|+.
T Consensus 27 G~G~Di~~~G~a 38 (48)
T PRK10081 27 GVGEDISDGGNA 38 (48)
T ss_pred hhhHhHHHHHHH
Confidence 345555555543
No 47
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=32.34 E-value=20 Score=23.68 Aligned_cols=11 Identities=36% Similarity=0.380 Sum_probs=9.6
Q ss_pred EEEEccccHHH
Q 038324 30 AVFNFGDSNSD 40 (84)
Q Consensus 30 ~i~~FGDSlsD 40 (84)
+|..+|||+++
T Consensus 2 ~i~~~GDSi~~ 12 (183)
T cd04501 2 RVVCLGDSITY 12 (183)
T ss_pred eEEEEcccccc
Confidence 57899999988
No 48
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=31.89 E-value=28 Score=20.72 Aligned_cols=18 Identities=28% Similarity=0.219 Sum_probs=14.1
Q ss_pred CCCEEEEccccHHHhhhc
Q 038324 27 KYPAVFNFGDSNSDTGEL 44 (84)
Q Consensus 27 ~~~~i~~FGDSlsDtGn~ 44 (84)
+...++.+|||.+|.=..
T Consensus 112 ~~~~~~~igD~~~d~~~~ 129 (139)
T cd01427 112 DPEEVLMVGDSLNDIEMA 129 (139)
T ss_pred ChhhEEEeCCCHHHHHHH
Confidence 457899999999996443
No 49
>PF06873 SerH: Cell surface immobilisation antigen SerH; InterPro: IPR009670 This entry consists of several cell surface immobilisation antigen SerH proteins which seem to be specific to Tetrahymena thermophila. The SerH locus of T. thermophila is one of several paralogous loci with genes encoding variants of the major cell surface protein known as the immobilisation antigen (i-ag) [].
Probab=31.14 E-value=52 Score=26.45 Aligned_cols=17 Identities=29% Similarity=0.540 Sum_probs=12.1
Q ss_pred CchhHHHHHHHHHHHHh
Q 038324 1 MTTKILIVQILTLCSII 17 (84)
Q Consensus 1 m~~~~~~~~~l~~~~~~ 17 (84)
|+.|++++.|+++.+++
T Consensus 1 M~~k~lii~Lii~~llv 17 (403)
T PF06873_consen 1 MQNKILIICLIISSLLV 17 (403)
T ss_pred CcchhhHHHHHHHHHHH
Confidence 99999988776544443
No 50
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=30.70 E-value=24 Score=23.04 Aligned_cols=11 Identities=36% Similarity=0.543 Sum_probs=9.4
Q ss_pred EEEEccccHHH
Q 038324 30 AVFNFGDSNSD 40 (84)
Q Consensus 30 ~i~~FGDSlsD 40 (84)
+|+++|||++.
T Consensus 1 ~v~~~GdSi~~ 11 (169)
T cd01828 1 ALVFLGDSLTE 11 (169)
T ss_pred CEEEecchhhc
Confidence 47899999996
No 51
>TIGR01779 TonB-B12 TonB-dependent vitamin B12 receptor. This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin).
Probab=30.24 E-value=58 Score=25.82 Aligned_cols=36 Identities=11% Similarity=0.061 Sum_probs=21.3
Q ss_pred CchhHHHHHHHHHHHHhhccccccCCCCCEEEEccc
Q 038324 1 MTTKILIVQILTLCSIILPKANSVVFKYPAVFNFGD 36 (84)
Q Consensus 1 m~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~FGD 36 (84)
|.|+.++-+++.++++|++..+........|.|=|.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eVvVta~ 36 (614)
T TIGR01779 1 MQKSALAPALASLLTLCSALHANEAQPLDTVVVTAN 36 (614)
T ss_pred CcchhhhHHHHHhhhhhhhhcccccCCcCcEEEEee
Confidence 678888777777776665533222223456666553
No 52
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=30.19 E-value=20 Score=23.68 Aligned_cols=11 Identities=27% Similarity=0.175 Sum_probs=9.0
Q ss_pred EEEEccccHHH
Q 038324 30 AVFNFGDSNSD 40 (84)
Q Consensus 30 ~i~~FGDSlsD 40 (84)
+|.++|||++.
T Consensus 1 ~i~~iGDSit~ 11 (169)
T cd01831 1 KIEFIGDSITC 11 (169)
T ss_pred CEEEEeccccc
Confidence 47899999876
No 53
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=29.25 E-value=32 Score=23.25 Aligned_cols=17 Identities=29% Similarity=0.548 Sum_probs=13.6
Q ss_pred CCEEEEccccHHHhhhc
Q 038324 28 YPAVFNFGDSNSDTGEL 44 (84)
Q Consensus 28 ~~~i~~FGDSlsDtGn~ 44 (84)
...++.||||.+|..-.
T Consensus 179 ~~~~~~~GD~~nD~~~~ 195 (204)
T TIGR01484 179 RDEILAFGDSGNDEEMF 195 (204)
T ss_pred HHHEEEEcCCHHHHHHH
Confidence 35799999999996544
No 54
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=29.21 E-value=25 Score=24.58 Aligned_cols=17 Identities=29% Similarity=0.391 Sum_probs=13.9
Q ss_pred CEEEEccccHHHhhhcc
Q 038324 29 PAVFNFGDSNSDTGELA 45 (84)
Q Consensus 29 ~~i~~FGDSlsDtGn~~ 45 (84)
..++.||||.+|.--..
T Consensus 176 ~~~i~~GD~~nD~~ml~ 192 (236)
T TIGR02471 176 EQILVAGDSGNDEEMLR 192 (236)
T ss_pred HHEEEEcCCccHHHHHc
Confidence 47899999999986544
No 55
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=28.86 E-value=25 Score=22.76 Aligned_cols=11 Identities=27% Similarity=0.579 Sum_probs=9.1
Q ss_pred EEEEccccHHH
Q 038324 30 AVFNFGDSNSD 40 (84)
Q Consensus 30 ~i~~FGDSlsD 40 (84)
+|..+|||++.
T Consensus 2 ~i~~~GDSit~ 12 (177)
T cd01822 2 TILALGDSLTA 12 (177)
T ss_pred eEEEEcccccc
Confidence 58899999974
No 56
>PF03996 Hema_esterase: Hemagglutinin esterase; InterPro: IPR007142 Haemagglutinin-esterase fusion glycoprotein (HEF) is a multi-functional protein embedded in the viral envelope of several viruses, including influenza C virus, coronaviruses and toroviruses [, ]. HEF is required for infectivity, and functions to recognise the host cell surface receptor, to fuse the viral and host cell membranes, and to destroy the receptor upon host cell infection. The haemagglutinin region of HEF is responsible for receptor recognition and membrane fusion, and bears a strong resemblance to the sialic acid-binding haemagglutinin found in influenza A and B viruses, except that it binds 9-O-acetylsialic acid. The esterase region of HEF is responsible for the destruction of the receptor, an action that is carried out by neuraminidase in influenza A and B viruses. The esterase domain is similar in structure to Streptomyces scabies esterase, and to acetylhydrolase, thioesterase I and rhamnogalacturonan acetylesterase. The haemagglutinin-esterase glycoprotein HEF must be cleaved by the host's trypsin-like proteases to produce two peptides (HEF1 and HEF2) in order for the virus to be infectious. Once HEF is cleaved, the newly exposed N-terminal of the HEF2 peptide then acts to fuse the viral envelope to the cellular membrane of the host cell, which allows the virus to infect the host cell. The haemagglutinin-esterase glycoprotein is a trimer, where each monomer is composed of three domains: an elongated stem active in membrane fusion, an esterase domain, and a receptor-binding domain, where the stem and receptor-binding domains together resemble influenza A virus haemagglutinin. Two of these domains are composed of non-contiguous sequence: the receptor-binding haemagglutinin domain is inserted into a surface loop of the esterase domain, and the esterase domain is inserted into a surface loop of the haemagglutinin stem. This entry represents the core of the haemagglutinin-esterase glycoprotein, including the haemagglutinin receptor-binding domain and the esterase domain. More information about haemagglutinin proteins can be found at Protein of the Month: Bird Flu, Haemagglutinin [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0046789 host cell surface receptor binding, 0019064 viral envelope fusion with host membrane, 0019031 viral envelope; PDB: 3CL5_A 3CL4_A 3I26_D 3I27_C 1FLC_E 3I1L_C 3I1K_C.
Probab=28.18 E-value=26 Score=26.52 Aligned_cols=17 Identities=41% Similarity=0.544 Sum_probs=12.8
Q ss_pred CEEEEccccHHHh---hhcc
Q 038324 29 PAVFNFGDSNSDT---GELA 45 (84)
Q Consensus 29 ~~i~~FGDSlsDt---Gn~~ 45 (84)
..-+-||||-||+ .|..
T Consensus 45 ~dW~lFGDSRSDC~~~~N~~ 64 (258)
T PF03996_consen 45 SDWFLFGDSRSDCNHINNSQ 64 (258)
T ss_dssp SSEEEEESGGG-TGGGTSTT
T ss_pred cceeEecCccccccccCCCC
Confidence 4568899999999 7754
No 57
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=28.02 E-value=34 Score=24.28 Aligned_cols=17 Identities=24% Similarity=0.298 Sum_probs=13.5
Q ss_pred CEEEEccccHHHhhhcc
Q 038324 29 PAVFNFGDSNSDTGELA 45 (84)
Q Consensus 29 ~~i~~FGDSlsDtGn~~ 45 (84)
..++.||||.+|.--..
T Consensus 200 ~~~i~~GD~~nD~~ml~ 216 (225)
T TIGR02461 200 IESVGLGDSENDFPMFE 216 (225)
T ss_pred ccEEEEcCCHHHHHHHH
Confidence 47899999999975543
No 58
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=27.84 E-value=29 Score=23.19 Aligned_cols=12 Identities=33% Similarity=0.418 Sum_probs=9.7
Q ss_pred EEEEccccHHHh
Q 038324 30 AVFNFGDSNSDT 41 (84)
Q Consensus 30 ~i~~FGDSlsDt 41 (84)
+|..+|||++..
T Consensus 1 ril~iGDS~~~g 12 (200)
T cd01829 1 RVLVIGDSLAQG 12 (200)
T ss_pred CEEEEechHHHH
Confidence 367889999975
No 59
>PF05984 Cytomega_UL20A: Cytomegalovirus UL20A protein; InterPro: IPR009245 This family consists of several Cytomegalovirus UL20A proteins. UL20A is thought to be a glycoprotein [].
Probab=27.24 E-value=81 Score=20.48 Aligned_cols=17 Identities=18% Similarity=0.483 Sum_probs=12.1
Q ss_pred CchhHHHHHHHHHHHHh
Q 038324 1 MTTKILIVQILTLCSII 17 (84)
Q Consensus 1 m~~~~~~~~~l~~~~~~ 17 (84)
|.++..++++|.+.+++
T Consensus 1 MaRRlwiLslLAVtLtV 17 (100)
T PF05984_consen 1 MARRLWILSLLAVTLTV 17 (100)
T ss_pred CchhhHHHHHHHHHHHH
Confidence 77888888777665554
No 60
>PF07365 Toxin_8: Alpha conotoxin precursor; InterPro: IPR009958 This family consists of several alpha conotoxin precursor proteins from a number of Conus species. Cone snail toxins, conotoxins, are small peptides with disulphide connectivity, that target ion-channels or G-protein coupled receptors. Based on the number and pattern of disulphide bonds and biological activities, conotoxins can be classified into several families []. Alpha-conotoxins are neurotoxins from the venom of fish-hunting cone snails that block nicotinic acetylcholine receptors (nAChRs) []. Omega, delta and kappa families of conotoxins have a knottin or inhibitor cystine knot scaffold. The knottin scaffold is a very special disulphide through disulphide knot, in which the III-VI disulphide bond crosses the macrocycle formed by two other disulphide bonds (I-IV and II-V) and the interconnecting backbone segments, where I-VI indicates the six cysteine residues starting from the N terminus. The disulphide bonding network as well as specific amino acids in inter-cysteine loops provide the specificity of conotoxin []. The cysteine arrangement is the same for omega, delta and kappa families, but omega conotoxins are calcium channel blockers, whereas delta conotoxins delay the inactivation of sodium channels and kappa conotoxins are potassium channel blockers []. Mu conotoxins have two types of cysteine arrangement, but the knottin scaffold is not observed. Mu conotoxins target the voltage-gated sodium channels [] and are useful probes for investigating voltage-dependent sodium channels of excitable tissues []. Alpha conotoxins have two types of cysteine arrangement [] and are competitive nicotinic acetylcholine receptor antagonists. ; GO: 0030550 acetylcholine receptor inhibitor activity, 0009405 pathogenesis, 0005576 extracellular region; PDB: 1ZLC_A 1MXN_A 1DG2_A 1MXP_A 2GCZ_A 1AKG_A 2NS3_A 2I28_A 1M2C_A 1MII_A ....
Probab=26.89 E-value=21 Score=20.31 Aligned_cols=11 Identities=45% Similarity=0.561 Sum_probs=0.0
Q ss_pred CCccCCCCCcH
Q 038324 64 SSGRFCDGRLI 74 (84)
Q Consensus 64 ptGRfSnG~~~ 74 (84)
+..|-||||+-
T Consensus 7 ~sdrASDGrNa 17 (50)
T PF07365_consen 7 TSDRASDGRNA 17 (50)
T ss_dssp -----------
T ss_pred cCccccCCcch
Confidence 34788999976
No 61
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=25.68 E-value=26 Score=23.62 Aligned_cols=12 Identities=25% Similarity=0.504 Sum_probs=9.9
Q ss_pred EEEEccccHHHh
Q 038324 30 AVFNFGDSNSDT 41 (84)
Q Consensus 30 ~i~~FGDSlsDt 41 (84)
+|..+|||++.-
T Consensus 1 ~i~~~GDSit~G 12 (204)
T cd04506 1 KIVALGDSLTEG 12 (204)
T ss_pred CEeEEeccccCc
Confidence 478999999884
No 62
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=25.59 E-value=28 Score=22.86 Aligned_cols=12 Identities=33% Similarity=0.492 Sum_probs=9.6
Q ss_pred EEEEccccHHHh
Q 038324 30 AVFNFGDSNSDT 41 (84)
Q Consensus 30 ~i~~FGDSlsDt 41 (84)
+|..+|||++.-
T Consensus 1 ~i~~~GDSit~g 12 (199)
T cd01838 1 KIVLFGDSITQF 12 (199)
T ss_pred CEEEecCccccc
Confidence 478899999864
No 63
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=25.43 E-value=34 Score=22.79 Aligned_cols=12 Identities=25% Similarity=0.174 Sum_probs=10.3
Q ss_pred CEEEEccccHHH
Q 038324 29 PAVFNFGDSNSD 40 (84)
Q Consensus 29 ~~i~~FGDSlsD 40 (84)
.+|..+|||++.
T Consensus 2 ~~i~~lGDSit~ 13 (193)
T cd01835 2 KRLIVVGDSLVY 13 (193)
T ss_pred cEEEEEcCcccc
Confidence 378999999986
No 64
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=24.71 E-value=32 Score=22.86 Aligned_cols=19 Identities=21% Similarity=0.302 Sum_probs=14.5
Q ss_pred CCEEEEccccHHHhhhccc
Q 038324 28 YPAVFNFGDSNSDTGELAA 46 (84)
Q Consensus 28 ~~~i~~FGDSlsDtGn~~~ 46 (84)
...++.+|||.+|.-....
T Consensus 163 ~~~~i~iGDs~~D~~~a~~ 181 (201)
T TIGR01491 163 LTETVAVGDSKNDLPMFEV 181 (201)
T ss_pred HHHEEEEcCCHhHHHHHHh
Confidence 4568999999999766543
No 65
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=24.40 E-value=34 Score=22.71 Aligned_cols=11 Identities=27% Similarity=0.540 Sum_probs=9.4
Q ss_pred EEEEccccHHH
Q 038324 30 AVFNFGDSNSD 40 (84)
Q Consensus 30 ~i~~FGDSlsD 40 (84)
+|.++|||++.
T Consensus 4 ~i~~~GDSit~ 14 (191)
T cd01836 4 RLLVLGDSTAA 14 (191)
T ss_pred EEEEEeccccc
Confidence 68899999984
No 66
>PRK03002 prsA peptidylprolyl isomerase; Reviewed
Probab=23.96 E-value=1.3e+02 Score=22.22 Aligned_cols=21 Identities=14% Similarity=0.268 Sum_probs=12.4
Q ss_pred CchhHHHHHHHHHHHHhhccc
Q 038324 1 MTTKILIVQILTLCSIILPKA 21 (84)
Q Consensus 1 m~~~~~~~~~l~~~~~~~~~~ 21 (84)
||++.+++.+++++.+.++.+
T Consensus 1 ~k~~~~~~~~~~~~~~~~~~c 21 (285)
T PRK03002 1 MRGKHIFIITALISILMLSAC 21 (285)
T ss_pred CchhHHHHHHHHHHHHHHHHh
Confidence 787766665555555544444
No 67
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=23.02 E-value=51 Score=22.15 Aligned_cols=13 Identities=46% Similarity=0.470 Sum_probs=11.3
Q ss_pred CEEEEccccHHHh
Q 038324 29 PAVFNFGDSNSDT 41 (84)
Q Consensus 29 ~~i~~FGDSlsDt 41 (84)
..++.+|||.+|.
T Consensus 145 ~~~v~iGDs~~D~ 157 (205)
T PRK13582 145 YRVIAAGDSYNDT 157 (205)
T ss_pred CeEEEEeCCHHHH
Confidence 5788999999994
No 68
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=22.93 E-value=54 Score=24.82 Aligned_cols=18 Identities=22% Similarity=0.292 Sum_probs=14.7
Q ss_pred CCCEEEEccccHHHhhhc
Q 038324 27 KYPAVFNFGDSNSDTGEL 44 (84)
Q Consensus 27 ~~~~i~~FGDSlsDtGn~ 44 (84)
....++++|||.+|..-.
T Consensus 210 ~~~~vI~vGDs~~Dl~ma 227 (277)
T TIGR01544 210 DRSNIILLGDSQGDLRMA 227 (277)
T ss_pred CcceEEEECcChhhhhHh
Confidence 456899999999997653
No 69
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=22.77 E-value=49 Score=22.75 Aligned_cols=13 Identities=38% Similarity=0.572 Sum_probs=11.4
Q ss_pred CEEEEccccHHHh
Q 038324 29 PAVFNFGDSNSDT 41 (84)
Q Consensus 29 ~~i~~FGDSlsDt 41 (84)
..|..+|||++.-
T Consensus 33 ~~iv~lGDSit~g 45 (214)
T cd01820 33 PDVVFIGDSITQN 45 (214)
T ss_pred CCEEEECchHhhh
Confidence 6899999999983
No 70
>PF01456 Mucin: Mucin-like glycoprotein; InterPro: IPR000458 This family of trypanosomal proteins resemble vertebrate mucins. The protein consists of three regions. The N and C terminii are conserved between all members of the family, whereas the central region is not well conserved and contains a large number of threonine residues which can be glycosylated []. Indirect evidence suggested that these genes might encode the core protein of parasite mucins, glycoproteins that were proposed to be involved in the interaction with, and invasion of, mammalian host cells.
Probab=21.84 E-value=86 Score=20.49 Aligned_cols=19 Identities=32% Similarity=0.364 Sum_probs=10.8
Q ss_pred CchhHHHHHHHHHHHHhhc
Q 038324 1 MTTKILIVQILTLCSIILP 19 (84)
Q Consensus 1 m~~~~~~~~~l~~~~~~~~ 19 (84)
|..-+++=.+|+|.++|.+
T Consensus 1 MmtcRLLCalLvlaLcCCp 19 (143)
T PF01456_consen 1 MMTCRLLCALLVLALCCCP 19 (143)
T ss_pred CchHHHHHHHHHHHHHcCc
Confidence 5555565556666665543
No 71
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=21.72 E-value=58 Score=22.52 Aligned_cols=18 Identities=22% Similarity=0.161 Sum_probs=13.8
Q ss_pred CCEEEEccccHHHhhhcc
Q 038324 28 YPAVFNFGDSNSDTGELA 45 (84)
Q Consensus 28 ~~~i~~FGDSlsDtGn~~ 45 (84)
...++.+|||.+|.-...
T Consensus 156 ~~~~i~iGDg~~D~~~a~ 173 (214)
T TIGR03333 156 NDYHIVIGDSVTDVEAAK 173 (214)
T ss_pred CCcEEEEeCCHHHHHHHH
Confidence 356788999999976543
No 72
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=21.53 E-value=56 Score=22.62 Aligned_cols=18 Identities=22% Similarity=0.124 Sum_probs=13.9
Q ss_pred CCEEEEccccHHHhhhcc
Q 038324 28 YPAVFNFGDSNSDTGELA 45 (84)
Q Consensus 28 ~~~i~~FGDSlsDtGn~~ 45 (84)
...++.+|||.+|.-...
T Consensus 160 ~~~~i~iGDs~~Di~aa~ 177 (219)
T PRK09552 160 NDFHIVIGDSITDLEAAK 177 (219)
T ss_pred CCCEEEEeCCHHHHHHHH
Confidence 346888899999976543
No 73
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=20.90 E-value=50 Score=22.39 Aligned_cols=14 Identities=29% Similarity=0.323 Sum_probs=11.6
Q ss_pred EEEEccccHHHhhh
Q 038324 30 AVFNFGDSNSDTGE 43 (84)
Q Consensus 30 ~i~~FGDSlsDtGn 43 (84)
.++.||||+++--.
T Consensus 10 ~i~~~GDSlt~g~~ 23 (216)
T COG2755 10 TVLALGDSLTAGYG 23 (216)
T ss_pred eEEEeccchhcccc
Confidence 79999999987543
No 74
>PF09403 FadA: Adhesion protein FadA; InterPro: IPR018543 FadA (Fusobacterium adhesin A) is an adhesin which forms two alpha helices. ; PDB: 3ETZ_B 3ETY_A 2GL2_B 3ETX_C 3ETW_A.
Probab=20.54 E-value=33 Score=23.18 Aligned_cols=15 Identities=53% Similarity=0.771 Sum_probs=0.0
Q ss_pred CchhHHHHHHHHHHHH
Q 038324 1 MTTKILIVQILTLCSI 16 (84)
Q Consensus 1 m~~~~~~~~~l~~~~~ 16 (84)
|| +++++++++++.+
T Consensus 1 MK-K~ll~~~lllss~ 15 (126)
T PF09403_consen 1 MK-KILLLGMLLLSSI 15 (126)
T ss_dssp ----------------
T ss_pred Ch-HHHHHHHHHHHHH
Confidence 77 4555555554444
No 75
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=20.37 E-value=47 Score=21.65 Aligned_cols=10 Identities=30% Similarity=0.252 Sum_probs=7.5
Q ss_pred EEEccccHHH
Q 038324 31 VFNFGDSNSD 40 (84)
Q Consensus 31 i~~FGDSlsD 40 (84)
|..+|||+.-
T Consensus 2 v~~~GDSv~~ 11 (150)
T cd01840 2 ITAIGDSVML 11 (150)
T ss_pred eeEEeehHHH
Confidence 5677999875
No 76
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=20.35 E-value=39 Score=23.07 Aligned_cols=18 Identities=17% Similarity=0.233 Sum_probs=13.3
Q ss_pred CCEEEEccccHHHhhhcc
Q 038324 28 YPAVFNFGDSNSDTGELA 45 (84)
Q Consensus 28 ~~~i~~FGDSlsDtGn~~ 45 (84)
...++.+|||.+|.-...
T Consensus 168 ~~~~i~iGDs~~Di~aa~ 185 (219)
T TIGR00338 168 PENTVAVGDGANDLSMIK 185 (219)
T ss_pred HHHEEEEECCHHHHHHHH
Confidence 356778999999975543
No 77
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=20.32 E-value=56 Score=21.34 Aligned_cols=16 Identities=25% Similarity=0.495 Sum_probs=12.7
Q ss_pred CCEEEEccccHHHhhh
Q 038324 28 YPAVFNFGDSNSDTGE 43 (84)
Q Consensus 28 ~~~i~~FGDSlsDtGn 43 (84)
...++..|||.+|.-.
T Consensus 162 ~~~~i~iGD~~~D~~a 177 (188)
T TIGR01489 162 YQHIIYIGDGVTDVCP 177 (188)
T ss_pred CceEEEECCCcchhch
Confidence 5678888999999544
No 78
>PLN02887 hydrolase family protein
Probab=20.17 E-value=48 Score=27.54 Aligned_cols=18 Identities=22% Similarity=0.375 Sum_probs=14.5
Q ss_pred CCEEEEccccHHHhhhcc
Q 038324 28 YPAVFNFGDSNSDTGELA 45 (84)
Q Consensus 28 ~~~i~~FGDSlsDtGn~~ 45 (84)
...+++||||.+|.-=..
T Consensus 523 ~eeviAFGDs~NDIeMLe 540 (580)
T PLN02887 523 PDEIMAIGDGENDIEMLQ 540 (580)
T ss_pred HHHEEEEecchhhHHHHH
Confidence 358999999999976554
No 79
>PF12771 SusD-like_2: Starch-binding associating with outer membrane; PDB: 3EJN_A 3FDH_A 3MX3_A.
Probab=20.17 E-value=34 Score=27.14 Aligned_cols=11 Identities=36% Similarity=0.531 Sum_probs=0.0
Q ss_pred CchhHHHHHHH
Q 038324 1 MTTKILIVQIL 11 (84)
Q Consensus 1 m~~~~~~~~~l 11 (84)
|||.++++.++
T Consensus 1 MKK~Il~i~l~ 11 (488)
T PF12771_consen 1 MKKIILIILLA 11 (488)
T ss_dssp -----------
T ss_pred CcHHHHHHHHH
Confidence 88887765333
No 80
>PRK15240 resistance to complement killing; Provisional
Probab=20.12 E-value=94 Score=21.90 Aligned_cols=11 Identities=27% Similarity=0.362 Sum_probs=7.0
Q ss_pred CchhHHHHHHH
Q 038324 1 MTTKILIVQIL 11 (84)
Q Consensus 1 m~~~~~~~~~l 11 (84)
||+..+++.++
T Consensus 1 Mkk~~~~~~~~ 11 (185)
T PRK15240 1 MKKIVLSSLLL 11 (185)
T ss_pred CchhHHHHHHH
Confidence 78876655443
Done!