BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038327
(91 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4PSU4|AGL61_ARATH Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana
GN=AGL61 PE=1 SV=1
Length = 264
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 40/129 (31%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEI--------------GHPSIEAVAN 46
M +I+ E R +TFSKR++ + KASEL TL GAEI GHPS+E+V +
Sbjct: 69 MVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPSVESVLD 128
Query: 47 RFLGQTRRQMT-------------------TLLLVEAQRQKERGNFLKQMTKGKETQR-- 85
R++ + + T +L E + +K++G +++M KE+ R
Sbjct: 129 RYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEMR--KESVRRS 186
Query: 86 ---WWETPV 91
WWE PV
Sbjct: 187 MINWWEKPV 195
>sp|Q9FKK2|AGL62_ARATH Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana
GN=AGL62 PE=1 SV=1
Length = 299
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 38/129 (29%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEI--------------GHPSIEAVAN 46
M +++NE + +TFSKR+S + KASEL TL GAE+ GHP++++V +
Sbjct: 13 MVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPNVDSVID 72
Query: 47 RF---------------LGQTRRQMT--------TLLLVEAQRQKERGNFLKQM-TKGKE 82
RF L +TRR T +L + + +K++ + LK++ K K
Sbjct: 73 RFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYDELKKIREKTKA 132
Query: 83 TQRWWETPV 91
WWE PV
Sbjct: 133 LGNWWEDPV 141
>sp|Q9C633|AGL97_ARATH Agamous-like MADS-box protein AGL97 OS=Arabidopsis thaliana
GN=AGL97 PE=1 SV=1
Length = 266
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 18/71 (25%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEI------------------GHPSIE 42
+++I+N++ R ++FSKR+ Y+KASEL L+ AEI GH S++
Sbjct: 10 IEKIQNKNPRAVSFSKRRKGLYSKASELCLLSDAEIAIIATPVSSNSNAAFYSFGHSSVD 69
Query: 43 AVANRFLGQTR 53
V FL R
Sbjct: 70 NVVAAFLANQR 80
>sp|Q42429|AGL8_SOLTU Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum
PE=2 SV=1
Length = 250
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN+ +R +TFSKR+S KA E+ L AE+G
Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVG 44
>sp|O22328|AGL8_SOLCO Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii
GN=SCM1 PE=2 SV=1
Length = 250
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN+ +R +TFSKR+S KA E+ L AE+G
Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVG 44
>sp|Q40170|AGL8_SOLLC Agamous-like MADS-box protein AGL8 homolog OS=Solanum
lycopersicum GN=TDR4 PE=2 SV=1
Length = 227
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN+ +R +TFSKR+S KA E+ L AE+G
Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVG 44
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
GN=MADS23 PE=2 SV=1
Length = 159
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRI+N R +TFSKR+S + KA EL L AE+G
Sbjct: 8 IKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVG 44
>sp|Q40702|MADS2_ORYSJ MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica
GN=MADS2 PE=2 SV=1
Length = 209
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN +R +TFSKR+S KA E+ L AE+G
Sbjct: 8 IKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVG 44
>sp|Q9XGJ4|GGM13_GNEGN MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1
Length = 237
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN +R +TFSKR+ KA EL L AE+G
Sbjct: 8 IKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELG 44
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica
GN=MADS27 PE=2 SV=2
Length = 240
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
++RI+N R +TFSKR++ + KA EL L AE+G
Sbjct: 8 IRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVG 44
>sp|P0DI14|AP1_BRARP Floral homeotic protein APETALA 1 OS=Brassica rapa subsp.
pekinensis GN=AP1 PE=3 SV=1
Length = 256
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN+ +R +TFSKR++ + KA E+ L AE+
Sbjct: 8 LKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVA 44
>sp|Q8GTF4|AP1C_BRAOB Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
botrytis GN=AP1C PE=2 SV=1
Length = 256
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN+ +R +TFSKR++ + KA E+ L AE+
Sbjct: 8 LKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVA 44
>sp|B4YPV4|AP1C_BRAOA Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
alboglabra GN=AP1C PE=3 SV=1
Length = 256
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN+ +R +TFSKR++ + KA E+ L AE+
Sbjct: 8 LKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVA 44
>sp|Q96355|1AP1_BRAOT Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var.
italica GN=1AP1 PE=2 SV=1
Length = 256
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN+ +R +TFSKR++ + KA E+ L AE+
Sbjct: 8 LKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVA 44
>sp|Q39371|3AP1_BRAOL Floral homeotic protein APETALA 1 OS=Brassica oleracea GN=AP1
PE=2 SV=1
Length = 256
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN+ +R +TFSKR++ + KA E+ L AE+
Sbjct: 8 LKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVA 44
>sp|Q38847|AGL15_ARATH Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana
GN=AGL15 PE=1 SV=1
Length = 268
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN + R +TFSKR+S KA EL L AE+
Sbjct: 8 IKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVA 44
>sp|Q8VWM8|M17_MAIZE MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1
Length = 259
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN +R +TFSKR+ KA+EL L A +G
Sbjct: 8 IKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVG 44
>sp|Q10CQ1|MAD14_ORYSJ MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica
GN=MADS14 PE=1 SV=2
Length = 246
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN+ +R +TFSKR+S KA+E+ L AE+
Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVA 44
>sp|Q6H711|MAD29_ORYSJ MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica
GN=MADS29 PE=2 SV=1
Length = 260
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN +R +TFSKR+ KA+EL L A +G
Sbjct: 8 IKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVG 44
>sp|P29386|AGL6_ARATH Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana
GN=AGL6 PE=1 SV=2
Length = 252
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
MKRIEN+ +R +TFSKR++ KA EL L AE+
Sbjct: 8 MKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVA 44
>sp|Q40703|MADS4_ORYSJ MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica
GN=MADS4 PE=1 SV=3
Length = 215
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN +R +TFSKR++ KA E+ L AE+G
Sbjct: 8 IKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVG 44
>sp|Q39295|AGL15_BRANA Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15
PE=3 SV=1
Length = 264
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN + R +TFSKR++ KA EL L AE+
Sbjct: 8 IKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVA 44
>sp|Q39375|CAL_BRAOT Transcription factor CAULIFLOWER OS=Brassica oleracea var.
italica GN=CAL PE=2 SV=1
Length = 251
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
MKRIEN+ +R +TFSKR++ KA E+ L AE+
Sbjct: 8 MKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVS 44
>sp|Q9SBK9|CAL_BRARP Transcription factor CAULIFLOWER OS=Brassica rapa subsp.
pekinensis GN=CAL PE=2 SV=1
Length = 254
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
MKRIEN+ +R +TFSKR++ KA E+ L AE+
Sbjct: 8 MKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVS 44
>sp|Q6R4S6|CAL_BRARC Transcription factor CAULIFLOWER OS=Brassica rapa subsp.
chinensis GN=CAL PE=2 SV=1
Length = 254
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
MKRIEN+ +R +TFSKR++ KA E+ L AE+
Sbjct: 8 MKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVS 44
>sp|Q6R4S3|CAL_BRARA Transcription factor CAULIFLOWER OS=Brassica rapa GN=CAL PE=2
SV=1
Length = 254
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
MKRIEN+ +R +TFSKR++ KA E+ L AE+
Sbjct: 8 MKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVS 44
>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
Length = 214
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 17/102 (16%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEI--------------GHPSIEAVAN 46
MKRIEN R +TFSKR++ KA EL L AE+ +++ +
Sbjct: 8 MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQDTID 67
Query: 47 RFLGQTRRQMTTLLLVEAQRQK---ERGNFLKQMTKGKETQR 85
R+L T+ +++T + E Q E N +K++ + + ++R
Sbjct: 68 RYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKR 109
>sp|Q8RVL4|DEF21_ANTMA MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1
Length = 247
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN R +TFSKR+S K EL L A+IG
Sbjct: 8 VKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIG 44
>sp|Q41274|AGL8_SINAL Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba
GN=AGL8 PE=2 SV=1
Length = 241
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN+ +R +TFSKR+S KA E+ L AE+
Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVA 44
>sp|Q6R4R7|CALC_BRAOB Truncated transcription factor CAULIFLOWER C OS=Brassica oleracea
var. botrytis GN=CAL-C PE=2 SV=1
Length = 148
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
MKRIEN+ +R +TFSKR++ KA E+ L AE+
Sbjct: 8 MKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVS 44
>sp|Q9SI38|ANR1_ARATH MADS-box transcription factor ANR1 OS=Arabidopsis thaliana
GN=ANR1 PE=1 SV=1
Length = 234
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
++RI+N R +TFSKR+S KA EL L AE+G
Sbjct: 8 IRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVG 44
>sp|P0C5B1|MAD14_ORYSI MADS-box transcription factor 14 OS=Oryza sativa subsp. indica
GN=MADS14 PE=2 SV=1
Length = 246
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN +R +TFSKR+S KA+E+ L AE+
Sbjct: 8 LKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVA 44
>sp|Q655V4|MAD30_ORYSJ MADS-box transcription factor 30 OS=Oryza sativa subsp. japonica
GN=MADS30 PE=2 SV=1
Length = 221
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
MKRIE+ R +TFSKR++ KA+EL L A++G
Sbjct: 8 MKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVG 44
>sp|Q6R4R9|CALA_BRAOB Truncated transcription factor CAULIFLOWER A OS=Brassica oleracea
var. botrytis GN=CAL-A PE=2 SV=2
Length = 150
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
MKRIEN+ +R +TFSKR++ KA E+ L AE+
Sbjct: 8 MKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVS 44
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN+ +R +TFSKR++ KA EL L AE+
Sbjct: 8 LKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVA 44
>sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana
GN=AGL8 PE=1 SV=1
Length = 242
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN+ +R +TFSKR+S KA E+ L AE+
Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVA 44
>sp|P48007|PIST_ARATH Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI
PE=1 SV=1
Length = 208
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN ++R++TFSKR++ KA E+ L A++
Sbjct: 8 IKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVA 44
>sp|Q6R4R6|CALD_BRAOB Truncated transcription factor CAULIFLOWER D OS=Brassica oleracea
var. botrytis GN=CAL-D PE=2 SV=1
Length = 148
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
MKRIEN+ +R +TFSKR++ KA E+ L AE+
Sbjct: 8 MKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVS 44
>sp|Q84NC2|MAD31_ORYSJ MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica
GN=MADS31 PE=2 SV=1
Length = 178
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+K+IEN +R +TFSKR+ KA+EL L A+IG
Sbjct: 8 LKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIG 44
>sp|Q38841|AGL12_ARATH Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana
GN=AGL12 PE=2 SV=2
Length = 211
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN R +TF KR++ KA EL L AEIG
Sbjct: 8 LKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIG 44
>sp|Q6R4R8|CALB_BRAOB Truncated transcription factor CAULIFLOWER B OS=Brassica oleracea
var. botrytis GN=CAL-B PE=2 SV=1
Length = 150
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
MKRIEN+ +R +TFSKR++ KA E+ L AE+
Sbjct: 8 MKRIENKINRQVTFSKRRAGLLKKAHEVSILCDAEVS 44
>sp|Q38837|AGL13_ARATH Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana
GN=AGL13 PE=2 SV=2
Length = 244
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEI 36
+KRIEN+ R +TFSKRKS KA EL L AE+
Sbjct: 8 VKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEV 43
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRI N R +TFSKR++ KA EL L AE+G
Sbjct: 8 IKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVG 44
>sp|Q7XUN2|MAD17_ORYSJ MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica
GN=MADS17 PE=1 SV=2
Length = 249
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN+ +R +TFSKR++ KA EL L AE+
Sbjct: 8 LKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVA 44
>sp|Q38838|AGL14_ARATH Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana
GN=AGL14 PE=1 SV=2
Length = 221
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
MKRIEN R +TFSKR++ KA EL L AE+
Sbjct: 8 MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVA 44
>sp|Q41276|AP1_SINAL Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2
SV=1
Length = 254
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN+ +R +TFSKR++ KA E+ L AE+
Sbjct: 8 LKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVA 44
>sp|Q9XJ60|MAD50_ORYSJ MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica
GN=MADS50 PE=2 SV=1
Length = 230
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
MKRIEN R +TFSKR++ KA EL L AE+
Sbjct: 8 MKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVA 44
>sp|D7KWY6|AP1_ARALL Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp.
lyrata GN=AP1 PE=3 SV=1
Length = 256
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN+ +R +TFSKR++ KA E+ L AE+
Sbjct: 8 LKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVA 44
>sp|A2IB53|AP1_CITSI Floral homeotic protein APETALA 1 OS=Citrus sinensis GN=AP1 PE=2
SV=1
Length = 256
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN+ +R +TFSKR++ KA E+ L AE+
Sbjct: 8 LKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVA 44
>sp|P35631|AP1_ARATH Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1
PE=1 SV=2
Length = 256
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 1 MKRIENEDDRLITFSKRKSRTYNKASELVTLTGAEIG 37
+KRIEN+ +R +TFSKR++ KA E+ L AE+
Sbjct: 8 LKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVA 44
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.128 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,071,170
Number of Sequences: 539616
Number of extensions: 861326
Number of successful extensions: 2683
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2520
Number of HSP's gapped (non-prelim): 165
length of query: 91
length of database: 191,569,459
effective HSP length: 61
effective length of query: 30
effective length of database: 158,652,883
effective search space: 4759586490
effective search space used: 4759586490
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)