Your job contains 1 sequence.
>038330
SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM
SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP
DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE
CSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRASFL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038330
(223 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2083383 - symbol:AT3G06770 species:3702 "Arabi... 514 2.5e-49 1
TAIR|locus:2086740 - symbol:AT3G16850 species:3702 "Arabi... 496 2.0e-47 1
TAIR|locus:504954979 - symbol:AT5G49215 species:3702 "Ara... 482 6.2e-46 1
TAIR|locus:2098038 - symbol:AT3G62110 species:3702 "Arabi... 402 1.9e-37 1
TAIR|locus:2152980 - symbol:AT5G41870 species:3702 "Arabi... 382 2.4e-35 1
TAIR|locus:2128524 - symbol:AT4G23820 species:3702 "Arabi... 371 3.6e-34 1
TAIR|locus:2119156 - symbol:AT4G33440 species:3702 "Arabi... 341 5.4e-31 1
TAIR|locus:2082787 - symbol:AT3G61490 species:3702 "Arabi... 336 1.8e-30 1
TAIR|locus:2101313 - symbol:AT3G48950 species:3702 "Arabi... 332 4.9e-30 1
TAIR|locus:2117964 - symbol:AT4G23500 species:3702 "Arabi... 324 5.6e-29 1
TAIR|locus:2202170 - symbol:AT1G19170 species:3702 "Arabi... 308 4.5e-27 1
TAIR|locus:2061396 - symbol:AT2G23900 species:3702 "Arabi... 300 2.5e-26 1
TAIR|locus:2078531 - symbol:AT3G42950 species:3702 "Arabi... 275 1.8e-23 1
TAIR|locus:2093212 - symbol:AT3G15720 species:3702 "Arabi... 134 1.9e-07 1
>TAIR|locus:2083383 [details] [associations]
symbol:AT3G06770 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005634
"nucleus" evidence=ISM] [GO:0005975 "carbohydrate metabolic
process" evidence=IEA;ISS] InterPro:IPR000743 Pfam:PF00295
EMBL:CP002686 GO:GO:0005576 GO:GO:0005975 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AY093030 EMBL:AY128935 IPI:IPI00522825
RefSeq:NP_850525.1 UniGene:At.26688 ProteinModelPortal:Q8RWK6
SMR:Q8RWK6 STRING:Q8RWK6 PRIDE:Q8RWK6 EnsemblPlants:AT3G06770.2
GeneID:819862 KEGG:ath:AT3G06770 TAIR:At3g06770 InParanoid:Q8RWK6
OMA:TENVHIR PhylomeDB:Q8RWK6 ProtClustDB:CLSN2688125
ArrayExpress:Q8RWK6 Genevestigator:Q8RWK6 Uniprot:Q8RWK6
Length = 446
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 103/200 (51%), Positives = 131/200 (65%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQXXXXXXXXXXXXX 60
SSD VCI++ I +G+DAISLKSGWDEYGIAY RPT +VHIR V L+
Sbjct: 236 SSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEM 295
Query: 61 XGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHX 120
GGIS+V V+ H++ SL GI FRTTKGRGGYIK+I IS+ ++ I A A G+ GSH
Sbjct: 296 SGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHP 355
Query: 121 XXXXXXXXXXXXXQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
I +I G NI IAG GI+E+PF+++ LSN+SL ++ GS SW+
Sbjct: 356 DDKYDVNALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSGSSVSWQ 415
Query: 181 CSNIHGSSESVFPEPCPELE 200
CS ++GSSESV PEPCPEL+
Sbjct: 416 CSYVYGSSESVIPEPCPELK 435
>TAIR|locus:2086740 [details] [associations]
symbol:AT3G16850 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0009505 "plant-type cell wall"
evidence=IDA] [GO:0006816 "calcium ion transport" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009637
"response to blue light" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005773 EMBL:CP002686
GO:GO:0005576 GO:GO:0005975 GO:GO:0009505 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AY035074 EMBL:AY113876 IPI:IPI00537813
RefSeq:NP_188308.1 UniGene:At.22797 ProteinModelPortal:Q94C86
STRING:Q94C86 PRIDE:Q94C86 EnsemblPlants:AT3G16850.1 GeneID:820938
KEGG:ath:AT3G16850 TAIR:At3g16850 InParanoid:Q94C86 OMA:CIEDSTI
PhylomeDB:Q94C86 ProtClustDB:CLSN2913450 ArrayExpress:Q94C86
Genevestigator:Q94C86 Uniprot:Q94C86
Length = 455
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 97/199 (48%), Positives = 127/199 (63%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQXXXXXXXXXXXXX 60
SSDNVCIED I +GHDA+SLKSGWD+YGI YGRPTT VHIR + L+
Sbjct: 233 SSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSEM 292
Query: 61 XGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHX 120
GG+S+V VE+++++ SL G+ FRTT+GRGGYI+ I ISD +L +++ A A G+ GSH
Sbjct: 293 SGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSHP 352
Query: 121 XXXXXXXXXXXXXQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
I ++ G +I +AGN TGI E+PF +ICL++I L S SW
Sbjct: 353 DDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTR--SEESWI 410
Query: 181 CSNIHGSSESVFPEPCPEL 199
CSN+ G S+ V PEPC EL
Sbjct: 411 CSNVSGFSDDVSPEPCQEL 429
>TAIR|locus:504954979 [details] [associations]
symbol:AT5G49215 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AY090997 EMBL:AY133817 IPI:IPI00524996
RefSeq:NP_680409.1 UniGene:At.44190 ProteinModelPortal:Q8RX04
PaxDb:Q8RX04 PRIDE:Q8RX04 EnsemblPlants:AT5G49215.1 GeneID:834981
KEGG:ath:AT5G49215 TAIR:At5g49215 InParanoid:Q8RX04 OMA:FLANGSF
PhylomeDB:Q8RX04 ProtClustDB:CLSN2690230 Genevestigator:Q8RX04
Uniprot:Q8RX04
Length = 449
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 107/225 (47%), Positives = 136/225 (60%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQXXXXXXXXXXXXX 60
SS+NVCI++ I MG+DAISLKSG DEYG++Y RPT +V IR V L+
Sbjct: 236 SSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQIRNVYLRAASGSSISFGSEM 295
Query: 61 XGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHX 120
GGIS+V+V H+++SL+GI FRTT GRGGYIK+I IS+ + N+ AF A G+ G+H
Sbjct: 296 SGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNIHMVNVGTAFLANGSFGTHP 355
Query: 121 XXXXXXXXXXXXXQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLI-NPGS-YNS 178
I DI+G NI+ AG F G +E+PF +I LSNISL I N S +S
Sbjct: 356 DSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTSILLSNISLSIKNSASPADS 415
Query: 179 WECSNIHGSSESVFPEPCPELEXXXXXXXXTCFSLIRYYGRASFL 223
W+CS + GSSE V PEPC EL+ S YYGRA L
Sbjct: 416 WQCSYVDGSSEFVVPEPCLELK-----------SFDSYYGRAEAL 449
>TAIR|locus:2098038 [details] [associations]
symbol:AT3G62110 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576
GO:GO:0005975 CAZy:GH28 eggNOG:COG5434 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AF324992 EMBL:BT000724 IPI:IPI00542616
RefSeq:NP_567126.1 UniGene:At.19142 ProteinModelPortal:Q9FPJ2
SMR:Q9FPJ2 PaxDb:Q9FPJ2 PRIDE:Q9FPJ2 EnsemblPlants:AT3G62110.1
GeneID:825384 KEGG:ath:AT3G62110 TAIR:At3g62110 InParanoid:Q9FPJ2
OMA:YGEHPDE PhylomeDB:Q9FPJ2 ProtClustDB:CLSN2689318
ArrayExpress:Q9FPJ2 Genevestigator:Q9FPJ2 Uniprot:Q9FPJ2
Length = 471
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 82/216 (37%), Positives = 115/216 (53%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQXXXXXXXXXXXXX 60
SS NVCIEDC I G D +S+KSGWDEYGI+Y RP++ + I R+ Q
Sbjct: 236 SSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEM 295
Query: 61 XGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHX 120
GG+S + ++ +HL++S GI +T+ GRGGY++ + I + +L N+ A G G H
Sbjct: 296 SGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHP 355
Query: 121 XXXXXXXXXXXXXQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-W 179
+ITF+++ G I +AG GI+ F NIC N++L + S S W
Sbjct: 356 DEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNICFLNVTLRVKKNSKKSPW 415
Query: 180 ECSNIHGSSESVFPE-PCPEL-EXXXXXXXXTCFSL 213
ECSN+ G S+ V PE C L E CF L
Sbjct: 416 ECSNVRGYSQWVSPEITCDSLKESIFPEHGSDCFGL 451
>TAIR|locus:2152980 [details] [associations]
symbol:AT5G41870 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AB016871 HSSP:P26509 HOGENOM:HOG000238076 EMBL:BT015129
IPI:IPI00540800 RefSeq:NP_199002.1 UniGene:At.27978
UniGene:At.43191 ProteinModelPortal:Q9FJ27 SMR:Q9FJ27 PaxDb:Q9FJ27
PRIDE:Q9FJ27 EnsemblPlants:AT5G41870.1 GeneID:834192
KEGG:ath:AT5G41870 TAIR:At5g41870 InParanoid:Q9FJ27 OMA:PCAELAT
PhylomeDB:Q9FJ27 ProtClustDB:CLSN2686003 Genevestigator:Q9FJ27
Uniprot:Q9FJ27
Length = 449
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 81/201 (40%), Positives = 110/201 (54%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQXXXXXXXXXXXXX 60
SS NVCIED I+ G D +++KSGWDEYGIAY RP+ D+ IRR+
Sbjct: 239 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNRPSRDITIRRIT-GSSPFAGIAIGSET 297
Query: 61 XGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHX 120
GGI NV VE I LY+S GI +T GRGG I+ I IS L + G+ G H
Sbjct: 298 SGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTGIKISGDTGDHP 357
Query: 121 XXXXXXXXXXXXXQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-- 178
IT K++ G + AG G++++PF N+C SN++L G+ S
Sbjct: 358 DDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNLCFSNVTLT---GTKRSPI 414
Query: 179 WECSNIHGSSESVFPEPCPEL 199
W+CS++ G+++ V P PCPEL
Sbjct: 415 WKCSDVVGAADKVNPTPCPEL 435
>TAIR|locus:2128524 [details] [associations]
symbol:AT4G23820 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005975 CAZy:GH28 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AL161560 EMBL:AL035394 HOGENOM:HOG000238076
ProtClustDB:CLSN2686003 EMBL:AY062697 EMBL:AY128793 IPI:IPI00542449
PIR:T05614 RefSeq:NP_194113.1 UniGene:At.22227 UniGene:At.67753
ProteinModelPortal:Q9SUP5 PaxDb:Q9SUP5 PRIDE:Q9SUP5
EnsemblPlants:AT4G23820.1 GeneID:828482 KEGG:ath:AT4G23820
TAIR:At4g23820 InParanoid:Q9SUP5 OMA:PCTELTS PhylomeDB:Q9SUP5
Genevestigator:Q9SUP5 Uniprot:Q9SUP5
Length = 444
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 78/199 (39%), Positives = 108/199 (54%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQXXXXXXXXXXXXX 60
SS NVCIED I+ G D +++KSGWD+YGIAYGRP++++ IRR+
Sbjct: 234 SSYNVCIEDSYISTGDDLVAIKSGWDQYGIAYGRPSSNITIRRIT-GSSPFAGIAIGSET 292
Query: 61 XGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHX 120
GGI N+ E I L + G+ +T GRGGYIK I ISD + G+ G H
Sbjct: 293 SGGIKNIIAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYVDTAKYGIKIAGDTGDHP 352
Query: 121 XXXXXXXXXXXXXQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
I K++ G N+ AG+ G++ +PF ICLS I+L + SY +W+
Sbjct: 353 DENYNPNALPVVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLNSYKTWK 412
Query: 181 CSNIHGSSESVFPEPCPEL 199
CS++ G+S V P PC EL
Sbjct: 413 CSDVSGTSLKVSPWPCSEL 431
>TAIR|locus:2119156 [details] [associations]
symbol:AT4G33440 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005975 CAZy:GH28 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:BT002785 EMBL:BT004354 IPI:IPI00528054
RefSeq:NP_195070.2 UniGene:At.43591 ProteinModelPortal:Q84K13
PaxDb:Q84K13 PRIDE:Q84K13 EnsemblPlants:AT4G33440.1 GeneID:829481
KEGG:ath:AT4G33440 TAIR:At4g33440 InParanoid:Q84K13 OMA:TRGHLIE
PhylomeDB:Q84K13 ProtClustDB:CLSN2690354 Genevestigator:Q84K13
Uniprot:Q84K13
Length = 475
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 68/199 (34%), Positives = 101/199 (50%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQXXXXXXXXXXXXX 60
SS NVCIEDC I G D +++KSGWD+YG+A RP++++ IRR+
Sbjct: 265 SSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGTTRTCSGVGIGSEM 324
Query: 61 XGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHX 120
GGI N+ VE IH++DS G+ +T KGRGGYI I ++ L + V H
Sbjct: 325 SGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPIRFSSGSNDHS 384
Query: 121 XXXXXXXXXXXXXQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
I +++ N A G++ F ++CL N++LL P + W+
Sbjct: 385 DDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTLLGLPKT-EKWK 443
Query: 181 CSNIHGSSESVFPEPCPEL 199
C ++ G + VFP CP+L
Sbjct: 444 CKDVSGYASDVFPLSCPQL 462
>TAIR|locus:2082787 [details] [associations]
symbol:AT3G61490 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 EMBL:AL132962 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 HOGENOM:HOG000238076 IPI:IPI00527942
PIR:T47941 RefSeq:NP_001190154.1 RefSeq:NP_191708.1
RefSeq:NP_974473.1 UniGene:At.43625 ProteinModelPortal:Q9M318
SMR:Q9M318 PaxDb:Q9M318 PRIDE:Q9M318 EnsemblPlants:AT3G61490.1
EnsemblPlants:AT3G61490.2 EnsemblPlants:AT3G61490.3 GeneID:825322
KEGG:ath:AT3G61490 TAIR:At3g61490 InParanoid:Q9M318 OMA:GKLKYTR
PhylomeDB:Q9M318 ProtClustDB:CLSN2915754 Genevestigator:Q9M318
Uniprot:Q9M318
Length = 476
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 67/201 (33%), Positives = 101/201 (50%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQXXXXXXXXXXXXX 60
S N IEDC I G D I++KSGWDEYGI++G PT + IRR+
Sbjct: 238 SCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSEM 297
Query: 61 XGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHX 120
GGI +V+ E I Y + +G+ +T GRG ++K I + L+ + F GN +H
Sbjct: 298 SGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAHA 357
Query: 121 XXXXXXXXXXXXXQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-W 179
I ++DI+ N+++AG GI PF IC+SN ++ + + W
Sbjct: 358 DSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAIW 417
Query: 180 ECSNIHGSSESVFPEPCPELE 200
CS++ G + V P+PC L+
Sbjct: 418 MCSDVEGVTSGVDPKPCDLLD 438
>TAIR|locus:2101313 [details] [associations]
symbol:AT3G48950 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 EMBL:AL132967 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 HOGENOM:HOG000238076
ProtClustDB:CLSN2684221 EMBL:DQ056615 IPI:IPI00541492 PIR:T46135
RefSeq:NP_190464.1 UniGene:At.53842 ProteinModelPortal:Q9SMT3
SMR:Q9SMT3 PaxDb:Q9SMT3 PRIDE:Q9SMT3 EnsemblPlants:AT3G48950.1
GeneID:824056 KEGG:ath:AT3G48950 TAIR:At3g48950 InParanoid:Q9SMT3
OMA:ARRITMK PhylomeDB:Q9SMT3 Genevestigator:Q9SMT3 Uniprot:Q9SMT3
Length = 469
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 65/197 (32%), Positives = 98/197 (49%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQXXXXXXXXXXXXX 60
S N IEDC I G D I++KSGWD+YGI +G PT + IRR+
Sbjct: 239 SCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEM 298
Query: 61 XGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHX 120
GGI +V++E + L ++ + I +T GRG Y+K I + + F GN GSH
Sbjct: 299 SGGIKDVRIEDVTLTNTESAIRIKTAVGRGAYVKDIYARRITMKTMKYVFWMSGNYGSHP 358
Query: 121 XXXXXXXXXXXXXQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
I ++D+ N+T++ + GI + PF IC+SN+++ L W
Sbjct: 359 DEGFDPKALPEITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVTIALAAKAKKMQW 418
Query: 180 ECSNIHGSSESVFPEPC 196
C+++ G + V PEPC
Sbjct: 419 NCTDVAGVTSRVTPEPC 435
>TAIR|locus:2117964 [details] [associations]
symbol:AT4G23500 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005618
"cell wall" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
GO:GO:0005618 GO:GO:0005576 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0005975 CAZy:GH28 eggNOG:COG5434 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AL031326
EMBL:AL161559 EMBL:AY142497 EMBL:AK221568 IPI:IPI00537164
PIR:T05388 RefSeq:NP_194081.1 UniGene:At.32423
ProteinModelPortal:O81746 SMR:O81746 PaxDb:O81746 PRIDE:O81746
EnsemblPlants:AT4G23500.1 GeneID:828450 KEGG:ath:AT4G23500
TAIR:At4g23500 HOGENOM:HOG000238076 InParanoid:O81746 OMA:YGRGRDT
PhylomeDB:O81746 ProtClustDB:CLSN2916139 Genevestigator:O81746
Uniprot:O81746
Length = 495
Score = 324 (119.1 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 64/197 (32%), Positives = 97/197 (49%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQXXXXXXXXXXXXX 60
S N IEDC I G D I++KSGWD+YGI YG PT + IRR+
Sbjct: 261 SCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRRLTCISPDSAVIALGSEM 320
Query: 61 XGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHX 120
GGI +V+ E I +S +GI +T GRGGY+K + + + + F G+ GSH
Sbjct: 321 SGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMTMMTMKYVFWMTGSYGSHP 380
Query: 121 XXXXXXXXXXXXXQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-W 179
I ++D++ N+T+ GI F IC+SN+++ ++ W
Sbjct: 381 DDHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVTITLSKKPKKVLW 440
Query: 180 ECSNIHGSSESVFPEPC 196
C+++ G + V P+PC
Sbjct: 441 NCTDVSGYTSGVTPQPC 457
>TAIR|locus:2202170 [details] [associations]
symbol:AT1G19170 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002684 GO:GO:0005576
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 IPI:IPI00527248 RefSeq:NP_173351.1 UniGene:At.41758
ProteinModelPortal:F4IE17 SMR:F4IE17 PRIDE:F4IE17
EnsemblPlants:AT1G19170.1 GeneID:838500 KEGG:ath:AT1G19170
OMA:GHYLRPS Uniprot:F4IE17
Length = 506
Score = 308 (113.5 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 62/201 (30%), Positives = 103/201 (51%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQXXXXXXXXXXXXX 60
S +++ IEDC I+ G DAI++KSGWD++GIAYGRP+T++ IR ++++
Sbjct: 282 SCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSEM 341
Query: 61 XGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHX 120
GGISNV +E + +++S GI +T GRGGYI+ I + L N+ V + H
Sbjct: 342 SGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEHA 401
Query: 121 XXXXXXXXXXXXXQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
+F I G + + G ++ P N+ ++S+ + + ++
Sbjct: 402 DDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFRDMSVGLTYKKKHIFQ 461
Query: 181 CSNIHGSS-ESVFPEPCPELE 200
CS + G S+FP PC +
Sbjct: 462 CSFVKGRVFGSIFPRPCENFD 482
>TAIR|locus:2061396 [details] [associations]
symbol:AT2G23900 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002685
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 EMBL:DQ446556 IPI:IPI00539911 RefSeq:NP_179968.2
UniGene:At.50092 ProteinModelPortal:Q1PF10 SMR:Q1PF10 PRIDE:Q1PF10
EnsemblPlants:AT2G23900.1 GeneID:816922 KEGG:ath:AT2G23900
TAIR:At2g23900 InParanoid:Q1PF10 OMA:NDGCDPE PhylomeDB:Q1PF10
ProtClustDB:CLSN2684221 Genevestigator:Q1PF10 Uniprot:Q1PF10
Length = 477
Score = 300 (110.7 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 63/197 (31%), Positives = 89/197 (45%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQXXXXXXXXXXXXX 60
S N IEDC + G D I++KSGWD++GI G PT + IRR+
Sbjct: 250 SCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEM 309
Query: 61 XGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHX 120
GGI +V++E I L + + I +T GRGGY+K I + + F G H
Sbjct: 310 SGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHP 369
Query: 121 XXXXXXXXXXXXXQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
I ++D+ N+T G + PF IC+SNI + L W
Sbjct: 370 ASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLW 429
Query: 180 ECSNIHGSSESVFPEPC 196
C++I G S V P+PC
Sbjct: 430 NCTSISGVSSKVTPKPC 446
>TAIR|locus:2078531 [details] [associations]
symbol:AT3G42950 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR000743
Pfam:PF00295 EMBL:CP002686 GO:GO:0005576 GO:GO:0005975 CAZy:GH28
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 EMBL:AL138654 EMBL:AY050383 IPI:IPI00517878
PIR:T47353 RefSeq:NP_189881.1 UniGene:At.1332
ProteinModelPortal:Q9M1L0 SMR:Q9M1L0 PRIDE:Q9M1L0
EnsemblPlants:AT3G42950.1 GeneID:823351 KEGG:ath:AT3G42950
TAIR:At3g42950 InParanoid:Q9M1L0 OMA:QNIRITN PhylomeDB:Q9M1L0
ProtClustDB:CLSN2682441 Genevestigator:Q9M1L0 Uniprot:Q9M1L0
Length = 484
Score = 275 (101.9 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 54/201 (26%), Positives = 98/201 (48%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQXXXXXXXXXXXXX 60
S +++ IE+ I++G D I++KSGWD+YG YG+P+ ++ IR ++++
Sbjct: 260 SCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRSMVSAGISIGSEM 319
Query: 61 XGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHX 120
GG+SN+ VE I ++ S G+ +T GRGGY++ I + L + V + H
Sbjct: 320 SGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGIVIKTDYNEHP 379
Query: 121 XXXXXXXXXXXXXQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
I + I G + + G +E P N+ ++S+ I + ++
Sbjct: 380 DGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRDMSVGITYKKKHIFQ 439
Query: 181 CSNIHGSS-ESVFPEPCPELE 200
C+ + G ++FP PC L+
Sbjct: 440 CAYVEGRVIGTIFPAPCDNLD 460
>TAIR|locus:2093212 [details] [associations]
symbol:AT3G15720 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0031225
"anchored to membrane" evidence=TAS] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] [GO:0009505 "plant-type cell wall"
evidence=IDA] InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0005975
GO:GO:0009505 CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792
KO:K01184 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AB017071 GO:GO:0046658 IPI:IPI00519614 RefSeq:NP_566524.1
UniGene:At.39003 HSSP:O74213 ProteinModelPortal:Q9LW07 SMR:Q9LW07
STRING:Q9LW07 EnsemblPlants:AT3G15720.1 GeneID:820815
KEGG:ath:AT3G15720 GeneFarm:340 TAIR:At3g15720 InParanoid:Q9LW07
OMA:SLRINAP PhylomeDB:Q9LW07 ProtClustDB:PLN03003
Genevestigator:Q9LW07 GermOnline:AT3G15720 Uniprot:Q9LW07
Length = 456
Score = 134 (52.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 49/208 (23%), Positives = 81/208 (38%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQ--XXXXXXXXXXX 58
+S NV I+DCIIA G D I++ SG T+++HI +
Sbjct: 195 ASSNVVIQDCIIATGDDCIAINSG-----------TSNIHISGIDCGPGHGISIGSLGKD 243
Query: 59 XXXGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN--VAFGACGNC 116
+ NV V+ + ++NG +T +G GY + I + L N+ + N
Sbjct: 244 GETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQFYNG 303
Query: 117 GSHXXXXXXXXXXXXXXQITFKDIIGTNITIAG-NFTGIQEAPFANICLSNISLLI---N 172
G ++ F + IGT+ + G +F + P I L ++ +
Sbjct: 304 GDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGVDFRCSERVPCTEIFLRDMKIETASSG 363
Query: 173 PGSYNSWECSNIHGSSESVFPE-PCPEL 199
G +C N+ G+S P C EL
Sbjct: 364 SGQVAQGQCLNVRGASTIAVPGLECLEL 391
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.139 0.432 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 223 187 0.00085 110 3 11 22 0.44 32
31 0.41 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 602 (64 KB)
Total size of DFA: 173 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.99u 0.11s 14.10t Elapsed: 00:00:00
Total cpu time: 14.00u 0.11s 14.11t Elapsed: 00:00:00
Start: Sat May 11 01:57:49 2013 End: Sat May 11 01:57:49 2013