BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038330
(223 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356529330|ref|XP_003533248.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 452
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 151/222 (68%), Positives = 181/222 (81%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSDNVCIEDCI+AMG DAISLKSGWDEYGIAYGRPT +VHIRRV L + SGS++AFGS+M
Sbjct: 230 SSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYGRPTENVHIRRVQLHAFSGSALAFGSDM 289
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV VE HL++S +GIEFRTTKGRGGY+K+IV+SD ++ N++ A A GNCGSHP
Sbjct: 290 SGGISNVLVEHAHLFNSNSGIEFRTTKGRGGYMKEIVMSDIQMENVHTAIAATGNCGSHP 349
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD FDP+ALP +D IT KD+IGTNITIAGN GI E+PF NICLSNI+L N S +W
Sbjct: 350 DDKFDPNALPHLDHITLKDVIGTNITIAGNLAGIDESPFTNICLSNITLSTNSVSPITWA 409
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRASF 222
CSN+ G S+SV PEPCPEL N+S +SSS+CF L+ G+ +
Sbjct: 410 CSNVSGFSDSVLPEPCPELGNTSYDSSSSCFYLLSVSGKTAL 451
>gi|224130360|ref|XP_002328589.1| predicted protein [Populus trichocarpa]
gi|222838571|gb|EEE76936.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 315 bits (808), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 152/221 (68%), Positives = 185/221 (83%), Gaps = 6/221 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS+NVCIED I +G+DAISLKSGWDEYGIAY RPTTDV+IRRV LQSSSGSSVAFGSEM
Sbjct: 234 SSNNVCIEDSRIEVGYDAISLKSGWDEYGIAYDRPTTDVYIRRVYLQSSSGSSVAFGSEM 293
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV VE++H+Y+S +GIEFRTTKGRGGYIK+I+ISD EL N N AFGA G+CGSHP
Sbjct: 294 SGGISNVHVEQVHIYNSFSGIEFRTTKGRGGYIKRIIISDVELKNTNTAFGAIGDCGSHP 353
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD+FDP+A+P +DQIT + +IG+NIT+AGNFTG+ E+PF ++CL N+SL I + + W
Sbjct: 354 DDNFDPNAIPVLDQITLQGVIGSNITMAGNFTGLAESPFTSLCLFNVSLAIR-NTLSPWT 412
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRAS 221
CSN+ G SESV PEPCPELE SSS C+SL+ YG+++
Sbjct: 413 CSNVVGFSESVSPEPCPELE-----SSSVCYSLLNSYGKST 448
>gi|356558153|ref|XP_003547372.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 579
Score = 315 bits (807), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 150/220 (68%), Positives = 180/220 (81%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSDNVCIEDCI+AMG DAISLKSGWDEYGIAYGRPT +VHIRRV L + SGS++AFGS+M
Sbjct: 357 SSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYGRPTENVHIRRVHLHAFSGSALAFGSDM 416
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV VE HL++S +GIEFRTTKGRGGY+K+IV+SD ++ N++ A A GNCGSHP
Sbjct: 417 SGGISNVLVEHAHLFNSKSGIEFRTTKGRGGYMKEIVMSDIQMENVHTAIAATGNCGSHP 476
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD FDP+ALP +D IT KD+ GTNI+IAGN GI+E+PF NICLSNI+L N S +WE
Sbjct: 477 DDKFDPNALPHLDHITLKDVTGTNISIAGNIAGIEESPFTNICLSNITLSTNSVSPITWE 536
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRA 220
CSN+ G S+SV PEPCPEL N S +SSS+CF L+ G+
Sbjct: 537 CSNVSGFSDSVLPEPCPELGNPSYDSSSSCFYLLSVSGKT 576
>gi|255551873|ref|XP_002516982.1| Polygalacturonase, putative [Ricinus communis]
gi|223544070|gb|EEF45596.1| Polygalacturonase, putative [Ricinus communis]
Length = 454
Score = 310 bits (794), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 152/225 (67%), Positives = 186/225 (82%), Gaps = 4/225 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS+NVCIE+ II MG+DAISLKSGWDEYGIAY R T DVHIRRV LQSSSGSS+AFGSEM
Sbjct: 232 SSNNVCIEESIIKMGYDAISLKSGWDEYGIAYDRATRDVHIRRVHLQSSSGSSIAFGSEM 291
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV VE++HLY+S +GI FRTTKGRGGYIK+I ISD EL NIN+A GA G+ G HP
Sbjct: 292 SGGISNVHVEQVHLYNSFSGIGFRTTKGRGGYIKRIFISDVELENINLALGAIGDHGLHP 351
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD FDP A+P +DQIT +++ GTNI+ AGNFTGIQ++PF ++CL NI+L+++ S NSW
Sbjct: 352 DDKFDPKAVPVVDQITLQNLTGTNISTAGNFTGIQDSPFTSLCLFNITLMVS--SSNSWT 409
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRY--YGRASFL 223
CSN+ G S+SVFP PCPEL++ SNSSS C+SL+ YG+++ L
Sbjct: 410 CSNVIGYSDSVFPVPCPELKSPYSNSSSACYSLLLLNSYGKSASL 454
>gi|359477236|ref|XP_003631950.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 275
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 145/197 (73%), Positives = 169/197 (85%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSD+ CIEDC IAMGHDAI+LKSGWDEYGIAYGRPTT+VHIRRV LQSSSGSS+AFGSEM
Sbjct: 52 SSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSEM 111
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV VE++HLY+S +GIEFRTTKGRGGYI++I+ISD + NI+ AF A G GSHP
Sbjct: 112 SGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSHP 171
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD FDP+ALP +D IT +++IGTNITIAG+FTGIQE+PF +ICLSNISL P + SW
Sbjct: 172 DDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLSTTPPASISWV 231
Query: 181 CSNIHGSSESVFPEPCP 197
CSN+ G S+ VFPEPCP
Sbjct: 232 CSNVSGFSQWVFPEPCP 248
>gi|225431820|ref|XP_002273305.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 457
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 145/197 (73%), Positives = 169/197 (85%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSD+ CIEDC IAMGHDAI+LKSGWDEYGIAYGRPTT+VHIRRV LQSSSGSS+AFGSEM
Sbjct: 234 SSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSEM 293
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV VE++HLY+S +GIEFRTTKGRGGYI++I+ISD + NI+ AF A G GSHP
Sbjct: 294 SGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSHP 353
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD FDP+ALP +D IT +++IGTNITIAG+FTGIQE+PF +ICLSNISL P + SW
Sbjct: 354 DDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLSTTPPASISWV 413
Query: 181 CSNIHGSSESVFPEPCP 197
CSN+ G S+ VFPEPCP
Sbjct: 414 CSNVSGFSQWVFPEPCP 430
>gi|224107034|ref|XP_002314352.1| predicted protein [Populus trichocarpa]
gi|222863392|gb|EEF00523.1| predicted protein [Populus trichocarpa]
Length = 435
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 146/205 (71%), Positives = 176/205 (85%), Gaps = 1/205 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS+NVCIED +I +G+DAISLKSGWDEYGIAY RPT DVHIRRV LQSSSGSS+AFGSEM
Sbjct: 232 SSNNVCIEDSLIKVGYDAISLKSGWDEYGIAYDRPTQDVHIRRVYLQSSSGSSIAFGSEM 291
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV VE+++LY+S +GIEFRTTKGRGGYIK+I+IS+ EL NIN+AFGA G+CGSHP
Sbjct: 292 SGGISNVYVEQVYLYNSFSGIEFRTTKGRGGYIKRIIISNVELKNINMAFGAIGDCGSHP 351
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD FDP+A+P +DQIT +++ G+NIT+AGNFTG+ E+PF +ICL N+SL I P + SW
Sbjct: 352 DDSFDPNAIPILDQITLQNVTGSNITMAGNFTGLAESPFTSICLFNVSLTI-PATSTSWT 410
Query: 181 CSNIHGSSESVFPEPCPELENSSSN 205
CSN+ G SE V PEPCPEL +S SN
Sbjct: 411 CSNVIGFSEFVSPEPCPELNSSYSN 435
>gi|296083315|emb|CBI22951.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 145/197 (73%), Positives = 169/197 (85%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSD+ CIEDC IAMGHDAI+LKSGWDEYGIAYGRPTT+VHIRRV LQSSSGSS+AFGSEM
Sbjct: 232 SSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSEM 291
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV VE++HLY+S +GIEFRTTKGRGGYI++I+ISD + NI+ AF A G GSHP
Sbjct: 292 SGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSHP 351
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD FDP+ALP +D IT +++IGTNITIAG+FTGIQE+PF +ICLSNISL P + SW
Sbjct: 352 DDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLSTTPPASISWV 411
Query: 181 CSNIHGSSESVFPEPCP 197
CSN+ G S+ VFPEPCP
Sbjct: 412 CSNVSGFSQWVFPEPCP 428
>gi|356564613|ref|XP_003550546.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 460
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/223 (64%), Positives = 178/223 (79%), Gaps = 5/223 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSD+VCIEDC+IA G+DAISLKSGWDEYGIAYGRPT +VHIRRV LQ+ SGS++AFGS+M
Sbjct: 243 SSDHVCIEDCVIATGYDAISLKSGWDEYGIAYGRPTENVHIRRVHLQAYSGSTIAFGSDM 302
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISN+ VE +HLY+S +GIEFRT +GRGGY+K+I+ISD E+ NI A A G CGSHP
Sbjct: 303 SGGISNILVENVHLYNSKSGIEFRTMRGRGGYMKEIIISDIEMENIYTAMAATGYCGSHP 362
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD FDP+ALP +D I +D+IGTNITIAG+F G+QE+PF NICLSN++L IN S WE
Sbjct: 363 DDKFDPNALPLLDHIILQDMIGTNITIAGSFAGLQESPFTNICLSNVTLSINSVSSIPWE 422
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRASFL 223
CSN+ G S+SV P+PCP+LE + S C SL+ G+ + +
Sbjct: 423 CSNVSGFSDSVLPKPCPDLE-----TLSDCLSLLSIKGKTAVM 460
>gi|357478841|ref|XP_003609706.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
gi|355510761|gb|AES91903.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
Length = 459
Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 146/219 (66%), Positives = 176/219 (80%), Gaps = 1/219 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSD+VCIEDC IA G+DAI+LKSGWDEYGIAYGRPT +VHIRRV LQ+S GS++AFGS+M
Sbjct: 233 SSDHVCIEDCTIATGYDAIALKSGWDEYGIAYGRPTENVHIRRVHLQASYGSTLAFGSDM 292
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV VE +HLY+S GIEFRT +GRGGY+K I++SD E+ NI A A G CGSHP
Sbjct: 293 SGGISNVFVEHVHLYNSKGGIEFRTIRGRGGYMKDIILSDIEMKNIYRAISATGYCGSHP 352
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD FDP+ALP +D F+DIIGTNITIAG+F G+QE+PF NICLSNI+L +N S SWE
Sbjct: 353 DDKFDPNALPLLDHFIFQDIIGTNITIAGSFAGLQESPFTNICLSNITLSVNYASSTSWE 412
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGR 219
CSN+ G S+SV P PCP+L+ S SN SS+C S + G+
Sbjct: 413 CSNVSGFSDSVLPIPCPDLD-SPSNYSSSCLSKLSMKGK 450
>gi|356519942|ref|XP_003528627.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 449
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 143/223 (64%), Positives = 177/223 (79%), Gaps = 5/223 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSD+VCIEDC+IA G+DAISLKSGWDEYGIAYGRPT +VHIRRV LQ+SSGS++AFGS+M
Sbjct: 232 SSDHVCIEDCVIATGYDAISLKSGWDEYGIAYGRPTENVHIRRVHLQASSGSTIAFGSDM 291
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISN+ VE +HLY+S +GIEFRT +GRGGY+K+I+ISD E+ NI A A G CGSHP
Sbjct: 292 SGGISNILVENVHLYNSKSGIEFRTMRGRGGYMKEIIISDIEMENIYTAIAATGYCGSHP 351
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD FDP+ALP +D I +D+IGTNITIAG+F G+QE+PF NICLSNI+L N S WE
Sbjct: 352 DDKFDPNALPLLDHIILQDMIGTNITIAGSFAGLQESPFTNICLSNITLSTNSVSSIPWE 411
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRASFL 223
CSN+ G S+ V P+PCP+LE + S C SL+ G+ + +
Sbjct: 412 CSNVSGFSDYVLPKPCPDLE-----TLSNCLSLLIIKGKTAVM 449
>gi|225437457|ref|XP_002269037.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 542
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 140/213 (65%), Positives = 167/213 (78%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS+ +CIED I+MG+DAI LKSGWDEYGIAYG+PT +VHIRRV LQSSSGS +AFGSEM
Sbjct: 320 SSEYICIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRNVHIRRVWLQSSSGSGLAFGSEM 379
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS++ VE IHL DS GI+ +TTKGRGGYIK I+ISD E+ N+ + GA G C SHP
Sbjct: 380 SGGISDILVEHIHLQDSSTGIKLKTTKGRGGYIKGILISDVEMENVGLTIGATGQCRSHP 439
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +DP ALP +D ITFKD++GTN++IAGNF+GI E+PF +ICL NISL I S W
Sbjct: 440 DDKYDPGALPVVDGITFKDMVGTNVSIAGNFSGIYESPFTSICLFNISLSITSNSSKPWL 499
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCFSL 213
CSN+ GSSE V PEPCP L+ +SNS STC S
Sbjct: 500 CSNVFGSSECVSPEPCPNLQTKTSNSFSTCSSF 532
>gi|297743929|emb|CBI36899.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/213 (65%), Positives = 167/213 (78%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS+ +CIED I+MG+DAI LKSGWDEYGIAYG+PT +VHIRRV LQSSSGS +AFGSEM
Sbjct: 255 SSEYICIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRNVHIRRVWLQSSSGSGLAFGSEM 314
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS++ VE IHL DS GI+ +TTKGRGGYIK I+ISD E+ N+ + GA G C SHP
Sbjct: 315 SGGISDILVEHIHLQDSSTGIKLKTTKGRGGYIKGILISDVEMENVGLTIGATGQCRSHP 374
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +DP ALP +D ITFKD++GTN++IAGNF+GI E+PF +ICL NISL I S W
Sbjct: 375 DDKYDPGALPVVDGITFKDMVGTNVSIAGNFSGIYESPFTSICLFNISLSITSNSSKPWL 434
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCFSL 213
CSN+ GSSE V PEPCP L+ +SNS STC S
Sbjct: 435 CSNVFGSSECVSPEPCPNLQTKTSNSFSTCSSF 467
>gi|449432886|ref|XP_004134229.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 457
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/223 (61%), Positives = 170/223 (76%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSD+VCIE C IA G+DAI+LKSGWD+YGIAYGRP+ ++HIRRV LQSSSGSS+AFGSEM
Sbjct: 235 SSDHVCIEGCNIATGYDAIALKSGWDQYGIAYGRPSKNIHIRRVHLQSSSGSSIAFGSEM 294
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV VE + L +S GI+ RTTKGRGGYIK IV+SD E+ NI+ AF A G+ GSHP
Sbjct: 295 SGGISNVLVEHVQLNNSFIGIQIRTTKGRGGYIKGIVVSDVEMENISTAFSASGHFGSHP 354
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD++DP+ALP + IT +++ GTNI IAGNF+GIQE+PF +I LSNI+ IN S SW
Sbjct: 355 DDEYDPNALPIVQDITLQNVRGTNIKIAGNFSGIQESPFTSIYLSNITFSINSSSSTSWI 414
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRASFL 223
CS++ G SESV P PC +L S SSS L+ G+ + L
Sbjct: 415 CSDVSGFSESVIPPPCSDLSTPYSISSSAASPLVNSTGKTAVL 457
>gi|449531087|ref|XP_004172519.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Cucumis sativus]
Length = 452
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/223 (61%), Positives = 170/223 (76%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSD+VCIE C IA G+DAI+LKSGWD+YGIAYGRP+ ++HIRRV LQSSSGSS+AFGSEM
Sbjct: 230 SSDHVCIEGCNIATGYDAIALKSGWDQYGIAYGRPSKNIHIRRVHLQSSSGSSIAFGSEM 289
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV VE + L +S GI+ RTTKGRGGYIK IV+SD E+ NI+ AF A G+ GSHP
Sbjct: 290 SGGISNVLVEHVQLNNSFIGIQIRTTKGRGGYIKGIVVSDVEMENISTAFSASGHFGSHP 349
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD++DP+ALP + IT +++ GTNI IAGNF+GIQE+PF +I LSNI+ IN S SW
Sbjct: 350 DDEYDPNALPIVQDITLQNVRGTNIKIAGNFSGIQESPFTSIYLSNITFSINSSSSTSWI 409
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRASFL 223
CS++ G SESV P PC +L S SSS L+ G+ + L
Sbjct: 410 CSDVSGFSESVIPPPCSDLSTPYSISSSAASPLVNSTGKTAVL 452
>gi|356501888|ref|XP_003519755.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 455
Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 167/212 (78%), Gaps = 1/212 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS++VCI++C I+ GHDAI LKSGWDEYG+AYG+PT++VHIR V LQSSSG+ +AFGSEM
Sbjct: 233 SSEHVCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRGVYLQSSSGAGLAFGSEM 292
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS++ E++H+ +S GIE +TT+GRGGY+K I ISDA+L NI + G+ GSHP
Sbjct: 293 SGGISDIIAEQLHITNSTFGIELKTTRGRGGYMKNIFISDAKLENIYLGISMTGSSGSHP 352
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +DP+A+P + +TF+++IG NI IAGNF+GI ++PF ICLSN++ + S SW
Sbjct: 353 DDKYDPNAVPDVGNVTFENVIGANIAIAGNFSGIVDSPFTPICLSNVTFSTSSESSPSWF 412
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCFS 212
CSN+ G S+ VFPEPCP+L+N+ SN SS CFS
Sbjct: 413 CSNVMGISKEVFPEPCPDLQNTYSNFSS-CFS 443
>gi|356570982|ref|XP_003553661.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 527
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 159/212 (75%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIE+ I+ GHDAI LKSGWD+YGIAYG+PT++VHI V LQSSSG+ +AFGSEM
Sbjct: 296 SSQNVCIENSNISTGHDAIVLKSGWDQYGIAYGKPTSNVHISNVYLQSSSGAGLAFGSEM 355
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS + EK+H+ +S GIE +TT+GRGGY++ I ISDAEL NI++ G G HP
Sbjct: 356 SGGISVIIAEKLHILNSPIGIELKTTRGRGGYMRGIFISDAELENISLGISMTGYSGFHP 415
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D +LP + ITFK++IG NI++AGNF+GI E+PF+ ICLSN++ ++ SW
Sbjct: 416 DDKYDTSSLPVVGDITFKNVIGANISVAGNFSGIVESPFSTICLSNVTFSLSSEPSPSWF 475
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCFS 212
CSN+ G SE V PEPCP++++S S +CFS
Sbjct: 476 CSNVIGFSEHVIPEPCPDIQSSYSKFPFSCFS 507
>gi|218186147|gb|EEC68574.1| hypothetical protein OsI_36908 [Oryza sativa Indica Group]
Length = 449
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 164/221 (74%), Gaps = 2/221 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NVCIED I++GHDAISLKSGWD YGI++GRPT+D+HI RV LQ+SSG+++A GSEM
Sbjct: 228 SCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISRVDLQASSGAALAIGSEM 287
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS++ V+ I + S GI FRTT GRGGYI ++V++D + ++++A GN SHP
Sbjct: 288 SGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVMDSVHLAIEFTGNWSSHP 347
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLI-NPGSYNSW 179
DD FDP LP IDQIT K++ GTNI++AG +GI+ PF+ ICLSN++ I + ++W
Sbjct: 348 DDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAICLSNLNFSIADSAPSSAW 407
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRA 220
CSN+HG SE VFP+PC EL ++S+N SS CFSL Y A
Sbjct: 408 TCSNVHGYSELVFPKPCSELHDTSTN-SSICFSLSSYSALA 447
>gi|356534963|ref|XP_003536020.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 456
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 163/213 (76%), Gaps = 2/213 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS++VCI + I+ GHDAI LKSGWD+YG+AYG+PT+ VHIR V LQSSSG+ +AFGSEM
Sbjct: 233 SSEHVCIYNSNISTGHDAIVLKSGWDQYGVAYGKPTSKVHIRGVYLQSSSGAGLAFGSEM 292
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS++ E++H+ +S GIE +TTKGRGGY+K I ISDA+L NI + G+ GSHP
Sbjct: 293 SGGISDIIAEQLHITNSTIGIELKTTKGRGGYMKNIFISDAKLENIYLGISMTGSSGSHP 352
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
DD +DP+A+P + +TF+++IGTNI IAGNF+GI ++PF ICL N + + S SW
Sbjct: 353 DDKYDPNAVPDVGNVTFENVIGTNIAIAGNFSGIVDSPFTPICLLNATFSSSSESSSPSW 412
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTCFS 212
CS+I G SE VFPEPCP+L+N+ SN SS CFS
Sbjct: 413 FCSDIMGISEEVFPEPCPDLQNTYSNFSS-CFS 444
>gi|115486511|ref|NP_001068399.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|77552386|gb|ABA95183.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113645621|dbj|BAF28762.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|222616379|gb|EEE52511.1| hypothetical protein OsJ_34717 [Oryza sativa Japonica Group]
Length = 449
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 164/221 (74%), Gaps = 2/221 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NVCIED I++GHDAISLKSGWD YGI++GRPT+D+HI RV LQ+SSG+++A GSEM
Sbjct: 228 SCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISRVDLQASSGAALAIGSEM 287
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS++ V+ I + S GI FRTT GRGGYI ++V++D + ++++A GN SHP
Sbjct: 288 SGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVMDSVHLAIEFTGNWSSHP 347
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLI-NPGSYNSW 179
DD FDP LP IDQIT K++ GTNI++AG +GI+ PF+ ICLSN++ I + ++W
Sbjct: 348 DDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAICLSNLNFSIADLAPSSAW 407
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRA 220
CSN+HG SE VFP+PC EL ++S+N SS CFSL Y A
Sbjct: 408 TCSNVHGYSELVFPKPCSELHDTSTN-SSICFSLSSYSALA 447
>gi|356503915|ref|XP_003520745.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 497
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 151/200 (75%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS VCIE+ I+ GHDA+ LKSGWD+YGIAYG+PT+ VHI V LQSSSG+ +AFGSEM
Sbjct: 251 SSRYVCIENSNISTGHDAVVLKSGWDQYGIAYGKPTSSVHISNVYLQSSSGAGLAFGSEM 310
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS++ EK+H+ +S GIE +TTKGRGGY++ I ISDAEL NI++ G G HP
Sbjct: 311 SGGISDIIAEKLHILNSPIGIELKTTKGRGGYMRGIFISDAELENISLGISMTGYSGFHP 370
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D ALP + ITFK++IG NI++AGNF+GI E+PF+ ICLSN++ ++ SW
Sbjct: 371 DDKYDTSALPIVGDITFKNVIGANISVAGNFSGIVESPFSTICLSNVTFSLSSEPSPSWF 430
Query: 181 CSNIHGSSESVFPEPCPELE 200
CSN+ G SE V PEPCP+L+
Sbjct: 431 CSNVIGFSEDVIPEPCPDLQ 450
>gi|212274809|ref|NP_001130359.1| uncharacterized protein LOC100191454 precursor [Zea mays]
gi|194688932|gb|ACF78550.1| unknown [Zea mays]
gi|413920257|gb|AFW60189.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 458
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 163/217 (75%), Gaps = 2/217 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N+CIED I++ H+AISLKSGWD YGI++GRPT+D+ I RV L SSSG+++AFGSEM
Sbjct: 237 SCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISRVDLLSSSGAALAFGSEM 296
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS++ V + ++DS GI F+T+ GRGGYI+ +VIS+ ++ N++V GNC +HP
Sbjct: 297 SGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQMENVHVGIEFTGNCSTHP 356
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGS-YNSW 179
DD FDP LPAID +T K++ GTNI++AG +GI+ APF ICLSN++ + GS +SW
Sbjct: 357 DDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAICLSNLNFSMAAGSGPSSW 416
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRY 216
CS++ G SE+VFPEPC EL + SS SSS C+SL Y
Sbjct: 417 SCSDVSGYSEAVFPEPCTELRDPSS-SSSVCYSLASY 452
>gi|15228881|ref|NP_188308.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|14334802|gb|AAK59579.1| putative polygalacturonase [Arabidopsis thaliana]
gi|21280835|gb|AAM44924.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332642352|gb|AEE75873.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 455
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 156/212 (73%), Gaps = 6/212 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSDNVCIED I +GHDA+SLKSGWD+YGI YGRPTT VHIR + L+S +G+ ++FGSEM
Sbjct: 233 SSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSEM 292
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S+V VE+++++ SL G+ FRTT+GRGGYI+ I ISD +L +++ A A G+ GSHP
Sbjct: 293 SGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSHP 352
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD FD DALP + I ++ G +I +AGN TGI E+PF +ICL++I L S SW
Sbjct: 353 DDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTR--SEESWI 410
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCFS 212
CSN+ G S+ V PEPC EL +S S+CF+
Sbjct: 411 CSNVSGFSDDVSPEPCQEL----MSSPSSCFA 438
>gi|7939578|dbj|BAA95779.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 453
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 156/212 (73%), Gaps = 6/212 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSDNVCIED I +GHDA+SLKSGWD+YGI YGRPTT VHIR + L+S +G+ ++FGSEM
Sbjct: 231 SSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSEM 290
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S+V VE+++++ SL G+ FRTT+GRGGYI+ I ISD +L +++ A A G+ GSHP
Sbjct: 291 SGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSHP 350
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD FD DALP + I ++ G +I +AGN TGI E+PF +ICL++I L S SW
Sbjct: 351 DDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTR--SEESWI 408
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCFS 212
CSN+ G S+ V PEPC EL +S S+CF+
Sbjct: 409 CSNVSGFSDDVSPEPCQEL----MSSPSSCFA 436
>gi|21553827|gb|AAM62920.1| polygalacturonase, putative [Arabidopsis thaliana]
Length = 453
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/212 (55%), Positives = 155/212 (73%), Gaps = 6/212 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSDNVCIED I +GHDA+SLKSGWD+YGI YGRPTT VHIR + L+S +G+ ++FGSEM
Sbjct: 231 SSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSEM 290
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S+V VE+++++ SL G+ FRTT+GRGGYI+ I ISD +L +++ A G+ GSHP
Sbjct: 291 SGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVTNGHTGSHP 350
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD FD DALP + I ++ G +I +AGN TGI E+PF +ICL++I L S SW
Sbjct: 351 DDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTR--SEESWI 408
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCFS 212
CSN+ G S+ V PEPC EL +S S+CF+
Sbjct: 409 CSNVSGFSDDVSPEPCQEL----MSSPSSCFA 436
>gi|297833452|ref|XP_002884608.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330448|gb|EFH60867.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 446
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/200 (59%), Positives = 153/200 (76%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS+ VCI++ I +G+DAISLKSGWDEYGIAY RPT +VHIR V L+ +SGSS++FGSEM
Sbjct: 236 SSNYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V V+ H+++SL GI FRTTKGRGGYIK+I IS+ ++ I A A G+ GSHP
Sbjct: 296 SGGISDVVVDNAHMHNSLTGIAFRTTKGRGGYIKEIDISNIDMSRIGTAIVANGSFGSHP 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D +ALP + I +I G NI IAG GI+E+PF+ + LSNI+L + GS SW+
Sbjct: 356 DDKYDANALPLVSHIRLSNISGENIGIAGKLFGIKESPFSAVALSNIALSTSSGSSVSWQ 415
Query: 181 CSNIHGSSESVFPEPCPELE 200
CS ++GSSESV PEPCPEL+
Sbjct: 416 CSYVYGSSESVIPEPCPELK 435
>gi|81074755|gb|ABB55373.1| polygalacturonase-like protein-like [Solanum tuberosum]
Length = 479
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 128/223 (57%), Positives = 167/223 (74%), Gaps = 4/223 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS++VCIE+ I+MG+DAI LKSGWDEYGI+YG+PT++VHIRRV LQS++G+ VA GSEM
Sbjct: 261 SSEHVCIENSNISMGYDAIVLKSGWDEYGISYGKPTSNVHIRRVRLQSAAGAGVALGSEM 320
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V VE L+DSL GIE +T +GRGG+IK I+IS+ + N+ V A G HP
Sbjct: 321 SGGISDVLVELSSLHDSLFGIELKTARGRGGFIKDILISNVVMDNLQVGIKATGYSDMHP 380
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ +DP +LP + ITF+DI+GTNI+IAGNFTG+ E+PF +ICLSNIS+ I+ W
Sbjct: 381 DEKYDPSSLPTVSGITFEDIVGTNISIAGNFTGLSESPFTSICLSNISISISSDPSTPWL 440
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRASFL 223
CSNI GSS++V PEPCPEL+ S S+CF+L Y + L
Sbjct: 441 CSNISGSSKNVSPEPCPELQ----GSFSSCFALPNPYTEVAVL 479
>gi|30679999|ref|NP_850525.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|20260262|gb|AAM13029.1| unknown protein [Arabidopsis thaliana]
gi|22136514|gb|AAM91335.1| unknown protein [Arabidopsis thaliana]
gi|332640935|gb|AEE74456.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 446
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/201 (59%), Positives = 154/201 (76%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSD VCI++ I +G+DAISLKSGWDEYGIAY RPT +VHIR V L+ +SGSS++FGSEM
Sbjct: 236 SSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V V+ H++ SL GI FRTTKGRGGYIK+I IS+ ++ I A A G+ GSHP
Sbjct: 296 SGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHP 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D +ALP + I +I G NI IAG GI+E+PF+++ LSN+SL ++ GS SW+
Sbjct: 356 DDKYDVNALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSGSSVSWQ 415
Query: 181 CSNIHGSSESVFPEPCPELEN 201
CS ++GSSESV PEPCPEL+
Sbjct: 416 CSYVYGSSESVIPEPCPELKR 436
>gi|18397713|ref|NP_566292.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|30680007|ref|NP_850526.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|7549636|gb|AAF63821.1| unknown protein [Arabidopsis thaliana]
gi|332640933|gb|AEE74454.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332640934|gb|AEE74455.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 120/200 (60%), Positives = 154/200 (77%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSD VCI++ I +G+DAISLKSGWDEYGIAY RPT +VHIR V L+ +SGSS++FGSEM
Sbjct: 167 SSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEM 226
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V V+ H++ SL GI FRTTKGRGGYIK+I IS+ ++ I A A G+ GSHP
Sbjct: 227 SGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHP 286
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D +ALP + I +I G NI IAG GI+E+PF+++ LSN+SL ++ GS SW+
Sbjct: 287 DDKYDVNALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSGSSVSWQ 346
Query: 181 CSNIHGSSESVFPEPCPELE 200
CS ++GSSESV PEPCPEL+
Sbjct: 347 CSYVYGSSESVIPEPCPELK 366
>gi|21593399|gb|AAM65366.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 120/200 (60%), Positives = 154/200 (77%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSD VCI++ I +G+DAISLKSGWDEYGIAY RPT +VHIR V L+ +SGSS++FGSEM
Sbjct: 167 SSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEM 226
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V V+ H++ SL GI FRTTKGRGGYIK+I IS+ ++ I A A G+ GSHP
Sbjct: 227 SGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHP 286
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D +ALP + I +I G NI IAG GI+E+PF+++ LSN+SL ++ GS SW+
Sbjct: 287 DDKYDVNALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSGSSVSWQ 346
Query: 181 CSNIHGSSESVFPEPCPELE 200
CS ++GSSESV PEPCPEL+
Sbjct: 347 CSYVYGSSESVIPEPCPELK 366
>gi|297830296|ref|XP_002883030.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
gi|297328870|gb|EFH59289.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 118/218 (54%), Positives = 157/218 (72%), Gaps = 7/218 (3%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSDNVCIED I +GHDA+SLKSGWD+YGI YGRPTT V+IR + L+S +G+ ++FGSEM
Sbjct: 231 SSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVYIRNLSLKSPTGAGISFGSEM 290
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V VE++++ S G+ FRTT+GRGGYI+ I ISD +L +++ A A G+ GSHP
Sbjct: 291 SGGISDVTVERLNIQSSHVGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSHP 350
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD FD DALP + I ++ G +I +AGN TGI E+PF +ICL++I L + +SW
Sbjct: 351 DDKFDWDALPVVTHIVLRNFTGVDIGLAGNLTGIGESPFTSICLTDIHLHTHS---DSWI 407
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYG 218
CSN+ G S+ V PEPC EL +S S+CF+ YG
Sbjct: 408 CSNVSGFSDDVSPEPCQELM----SSPSSCFAGGSIYG 441
>gi|357151266|ref|XP_003575734.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 457
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 161/221 (72%), Gaps = 2/221 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IED I++ HDAIS+KSGWD+YGI+ G+P +D+HI R+ LQ+SSG+++AFGSEM
Sbjct: 236 SSSNVVIEDSTISVSHDAISIKSGWDKYGISIGKPASDIHISRMDLQASSGAALAFGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS++ + I ++ S GI F+TT GRGGYI ++VISD ++ ++ VA GN SHP
Sbjct: 296 SGGISDIHADNIQIHGSNKGISFKTTPGRGGYIDEVVISDVKMDDVIVAIEFTGNWSSHP 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLI-NPGSYNSW 179
D+DFDP LP I QIT KD++GTNI++AG +GI PF ICLSN++ L+ +SW
Sbjct: 356 DEDFDPSQLPVIGQITLKDMVGTNISVAGVLSGIDGDPFTAICLSNVNFLMAESAHSSSW 415
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRA 220
CSN+ G SESVFPEPC EL SSN SS CFSL+ Y A
Sbjct: 416 SCSNVSGYSESVFPEPCSELHTPSSN-SSMCFSLVSYSALA 455
>gi|242071887|ref|XP_002451220.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
gi|241937063|gb|EES10208.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
Length = 448
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 165/223 (73%), Gaps = 4/223 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N+CIED I++ H+AISLKSGWD+YGI++GRPT+D+HI RV L SSSG+++AFGSEM
Sbjct: 227 SCSNLCIEDSTISVSHEAISLKSGWDKYGISFGRPTSDIHISRVDLLSSSGAALAFGSEM 286
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS++ V + ++DS GI F+T+ GRGGYI++++IS+ ++ N++V GNC +HP
Sbjct: 287 SGGISDIHVNHLRIHDSYKGISFKTSPGRGGYIEEVIISEVQMENVHVGIEFTGNCSTHP 346
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI--SLLINPGSYNS 178
DD FD LP IDQ+T K+++GTNI++AG +GI APF ICLSN+ S+ + GS +
Sbjct: 347 DDSFDLSDLPTIDQVTMKNMVGTNISVAGVLSGIDNAPFTAICLSNLNFSMAADTGSSSW 406
Query: 179 WECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRAS 221
CSN+ G SE+VFPEPC EL + SS S S CFSL Y A+
Sbjct: 407 -SCSNVSGYSEAVFPEPCTELRDPSS-SPSICFSLSSYSAIAA 447
>gi|357150536|ref|XP_003575492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 451
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 150/201 (74%), Gaps = 1/201 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NVCIED I++ HDAISLKSGWD YGI +GRPT+D+HI RV LQ+S G+++A GSEM
Sbjct: 230 SCSNVCIEDSRISVSHDAISLKSGWDNYGITFGRPTSDIHICRVDLQASLGAALALGSEM 289
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V V+ +H++ S G+ FRT GRGGYI+ ++ISD ++ +++VA G+ SHP
Sbjct: 290 SGGISDVHVDHLHIHASSKGVSFRTAPGRGGYIRDVIISDVQMEDVHVAIEFTGDWSSHP 349
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SW 179
D+ FDP ALP I IT K+++GTNI++AG +GI PF +ICLSN++ I +++ SW
Sbjct: 350 DEHFDPSALPVISGITLKNMVGTNISVAGVLSGIDGDPFTDICLSNVNFSIPDSAHSTSW 409
Query: 180 ECSNIHGSSESVFPEPCPELE 200
CSNI G SE VFPEPC +L+
Sbjct: 410 SCSNISGYSELVFPEPCTDLQ 430
>gi|297792177|ref|XP_002863973.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297309808|gb|EFH40232.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 447
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 122/227 (53%), Positives = 156/227 (68%), Gaps = 17/227 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS+NVCI+D I MG+DAISLKSGWDEYGI+Y RPT +V I+ V L ++SGSS++FGSEM
Sbjct: 234 SSENVCIQDSSINMGYDAISLKSGWDEYGISYARPTANVQIKNVYLGAASGSSISFGSEM 293
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V+V H+++SL+GI FRTT GRGGYIK+I IS+ + N+ AF A G+ G+HP
Sbjct: 294 SGGISDVEVRDAHIHNSLSGISFRTTNGRGGYIKEIDISNIHMVNVGTAFLANGSFGTHP 353
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLIN----PGSY 176
D FD +A P + I DI G NI+ AG F G +E+PF +I LSNISL I P +
Sbjct: 354 DSGFDANAFPLVSHIRLHDIAGENISTAGYFFGTEESPFTSILLSNISLSIKNSDSPADF 413
Query: 177 NSWECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRASFL 223
W+CS + GSSE V PEPC EL++ S+ YGRA L
Sbjct: 414 --WQCSYVDGSSEFVVPEPCLELKSFDSS-----------YGRAEAL 447
>gi|22327662|ref|NP_680409.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|20258821|gb|AAM14020.1| unknown protein [Arabidopsis thaliana]
gi|22136814|gb|AAM91751.1| unknown protein [Arabidopsis thaliana]
gi|332008401|gb|AED95784.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 158/225 (70%), Gaps = 13/225 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS+NVCI++ I MG+DAISLKSG DEYG++Y RPT +V IR V L+++SGSS++FGSEM
Sbjct: 236 SSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQIRNVYLRAASGSSISFGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V+V H+++SL+GI FRTT GRGGYIK+I IS+ + N+ AF A G+ G+HP
Sbjct: 296 SGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNIHMVNVGTAFLANGSFGTHP 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGS--YNS 178
D FD +A P + I DI+G NI+ AG F G +E+PF +I LSNISL I + +S
Sbjct: 356 DSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTSILLSNISLSIKNSASPADS 415
Query: 179 WECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRASFL 223
W+CS + GSSE V PEPC EL++ S YYGRA L
Sbjct: 416 WQCSYVDGSSEFVVPEPCLELKSFDS-----------YYGRAEAL 449
>gi|79330402|ref|NP_001032043.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|110739511|dbj|BAF01664.1| hypothetical protein [Arabidopsis thaliana]
gi|332008402|gb|AED95785.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 447
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 158/225 (70%), Gaps = 13/225 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS+NVCI++ I MG+DAISLKSG DEYG++Y RPT +V IR V L+++SGSS++FGSEM
Sbjct: 234 SSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQIRNVYLRAASGSSISFGSEM 293
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V+V H+++SL+GI FRTT GRGGYIK+I IS+ + N+ AF A G+ G+HP
Sbjct: 294 SGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNIHMVNVGTAFLANGSFGTHP 353
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGS--YNS 178
D FD +A P + I DI+G NI+ AG F G +E+PF +I LSNISL I + +S
Sbjct: 354 DSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTSILLSNISLSIKNSASPADS 413
Query: 179 WECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRASFL 223
W+CS + GSSE V PEPC EL++ S YYGRA L
Sbjct: 414 WQCSYVDGSSEFVVPEPCLELKSFDS-----------YYGRAEAL 447
>gi|413916538|gb|AFW56470.1| polygalacturonase [Zea mays]
Length = 458
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/219 (51%), Positives = 156/219 (71%), Gaps = 3/219 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N+CIED I++ HDAISLKSGWD+ GIA+GRPT+D+HI R+ LQSS G+++AFGSEM
Sbjct: 234 SCSNMCIEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDLQSSLGAALAFGSEM 293
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS++ +++ ++ S G+ F+T GRGGYI+ VISD ++ +++VA G+ SHP
Sbjct: 294 SGGISDIHADRLLIHSSSRGVFFKTAPGRGGYIRDTVISDVQMEDVDVAIAFTGDWPSHP 353
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI--SLLINPGSYNS 178
DD FDP ALP + IT K++ GT I++AG +GI PF +ICLSNI SL + +
Sbjct: 354 DDQFDPAALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLSNINFSLADSASPTSH 413
Query: 179 WECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYY 217
W CSN+ G SE VFPEPC +L+ SS+ +S C +L ++
Sbjct: 414 WSCSNVSGYSELVFPEPCLDLQTQSSD-ASVCSTLPSFH 451
>gi|226507254|ref|NP_001148987.1| polygalacturonase precursor [Zea mays]
gi|195623798|gb|ACG33729.1| polygalacturonase [Zea mays]
Length = 458
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/219 (51%), Positives = 155/219 (70%), Gaps = 3/219 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N+CIED I++ HDAISLKSGWD+ GIA+GRPT+D+HI R+ LQSS G+++ FGSEM
Sbjct: 234 SCSNMCIEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDLQSSLGAALTFGSEM 293
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V +++ ++ S G+ F+T GRGGYI+ VISD ++ +++VA G+ SHP
Sbjct: 294 SGGISDVHADRLLIHSSFRGVFFKTAPGRGGYIRDTVISDVQMEDVDVAIAFTGDWPSHP 353
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI--SLLINPGSYNS 178
DD FDP ALP + IT K++ GT I++AG +GI PF +ICLSNI SL + +
Sbjct: 354 DDQFDPTALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLSNINFSLADSASPTSH 413
Query: 179 WECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYY 217
W CSN+ G SE VFPEPC +L+ SS+ +S C +L ++
Sbjct: 414 WSCSNVSGYSELVFPEPCLDLQTQSSD-ASICSTLPSFH 451
>gi|218187051|gb|EEC69478.1| hypothetical protein OsI_38684 [Oryza sativa Indica Group]
Length = 365
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 124/222 (55%), Positives = 166/222 (74%), Gaps = 2/222 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N+CIED I++ HDAISLKSGWD YGI GRP +D+HI RV LQ+S G+++AFGSEM
Sbjct: 144 SCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAALAFGSEM 203
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS++ V+ ++++ S GI F+T GRGGYI+ +VISD ++ ++NVA G+ +HP
Sbjct: 204 SGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFTGDWSTHP 263
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D+ FDP ALP I++IT K+++GTNI++AG +GI PF NICLSNIS L + +SW
Sbjct: 264 DNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLADSTQSSSW 323
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRAS 221
CSNI G SE VFPEPCP+L +SSS +SS CFSL+ Y+ A+
Sbjct: 324 SCSNISGYSELVFPEPCPDLHHSSS-NSSICFSLLTYHALAA 364
>gi|108862809|gb|ABA99544.2| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|222617271|gb|EEE53403.1| hypothetical protein OsJ_36464 [Oryza sativa Japonica Group]
Length = 457
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 124/222 (55%), Positives = 166/222 (74%), Gaps = 2/222 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N+CIED I++ HDAISLKSGWD YGI GRP +D+HI RV LQ+S G+++AFGSEM
Sbjct: 236 SCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAALAFGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS++ V+ ++++ S GI F+T GRGGYI+ +VISD ++ ++NVA G+ +HP
Sbjct: 296 SGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFTGDWSTHP 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D+ FDP ALP I++IT K+++GTNI++AG +GI PF NICLSNIS L + +SW
Sbjct: 356 DNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLADSTQSSSW 415
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRAS 221
CSNI G SE VFPEPCP+L +SSS +SS CFSL+ Y+ A+
Sbjct: 416 SCSNISGYSELVFPEPCPDLHHSSS-NSSICFSLLTYHALAA 456
>gi|115489012|ref|NP_001066993.1| Os12g0554800 [Oryza sativa Japonica Group]
gi|113649500|dbj|BAF30012.1| Os12g0554800, partial [Oryza sativa Japonica Group]
Length = 424
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 124/222 (55%), Positives = 166/222 (74%), Gaps = 2/222 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N+CIED I++ HDAISLKSGWD YGI GRP +D+HI RV LQ+S G+++AFGSEM
Sbjct: 203 SCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAALAFGSEM 262
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS++ V+ ++++ S GI F+T GRGGYI+ +VISD ++ ++NVA G+ +HP
Sbjct: 263 SGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFTGDWSTHP 322
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D+ FDP ALP I++IT K+++GTNI++AG +GI PF NICLSNIS L + +SW
Sbjct: 323 DNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLADSTQSSSW 382
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRAS 221
CSNI G SE VFPEPCP+L +SSS +SS CFSL+ Y+ A+
Sbjct: 383 SCSNISGYSELVFPEPCPDLHHSSS-NSSICFSLLTYHALAA 423
>gi|357511567|ref|XP_003626072.1| Polygalacturonase [Medicago truncatula]
gi|355501087|gb|AES82290.1| Polygalacturonase [Medicago truncatula]
Length = 466
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 148/214 (69%), Gaps = 3/214 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSD+VCIEDC I+ G D I++KSGWDEYGIA+GRP+T++ I R++ ++ + + +A GSEM
Sbjct: 236 SSDDVCIEDCYISTGDDLIAIKSGWDEYGIAFGRPSTNIVIHRLVGKTHTSAGIAIGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S+V+ E IH YDS I +T+ GRGGY++ I +++ L N+++A G+ G HP
Sbjct: 296 SGGVSDVRAEDIHFYDSYTAIRIKTSPGRGGYVRNIYVTNMTLANVDIAIRFTGSYGDHP 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +DP+ALP I++IT +D+IG NIT AG GI+ F NICLSNI+L N S W
Sbjct: 356 DDAYDPNALPVIEKITIEDVIGENITKAGLIEGIEGDNFVNICLSNITL--NVSSNYPWN 413
Query: 181 CSNIHGSSESVFPEPC-PELENSSSNSSSTCFSL 213
CSNI G S+ VFPE C P E + S C+ L
Sbjct: 414 CSNIRGYSDMVFPEACEPLKERIFPDHCSDCYYL 447
>gi|109509138|gb|ABG34278.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 307
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/216 (50%), Positives = 148/216 (68%), Gaps = 4/216 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSD+VCIEDC I+ G D I++KSGWDEYGI+YGRP+ ++ IRR++ ++ S S +A GSEM
Sbjct: 75 SSDDVCIEDCYISTGDDVIAIKSGWDEYGISYGRPSKNIIIRRLIGETHS-SGIAIGSEM 133
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S+V E I ++S GI +T+ GRGGY++ I IS+ L N+ VA G G HP
Sbjct: 134 SGGVSDVHAEDIVFFNSTTGIRIKTSPGRGGYVRNIFISNVSLANVKVAIRFTGRYGEHP 193
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ +DP A+P I++ITFKDI G NIT+AG GI+ F NICL NI+L +N S + W
Sbjct: 194 DESYDPKAMPKIERITFKDIHGENITVAGLMEGIEGDNFINICLYNITLSVN--SISPWN 251
Query: 181 CSNIHGSSESVFPEPCPELENS-SSNSSSTCFSLIR 215
CSN+ G S VFP+ C LE S + + C+ L++
Sbjct: 252 CSNVQGFSSLVFPQTCELLEESIFPDHCTECYHLLQ 287
>gi|356572848|ref|XP_003554577.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 467
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 142/214 (66%), Gaps = 4/214 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSDNVCIEDC I+ G D I++KSGWDEYGIAYGRP+T++ I R L+ + S +A GSEM
Sbjct: 236 SSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHR-LVGKTQTSGIAIGSEM 294
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S V E I YDS NGI +T+ GRGGY++ I +S+ L N+++A G+ G HP
Sbjct: 295 SGGVSEVHAEDIQFYDSYNGIRIKTSPGRGGYVRNIYVSNVSLANVDIAIWFTGSYGEHP 354
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +DP+ALP I+++T KD++G NI AG GI+ F NICLSNI ++N S W
Sbjct: 355 DDAYDPNALPVIEKVTIKDVVGENIKTAGLIEGIEGDNFVNICLSNI--ILNVTSNYPWN 412
Query: 181 CSNIHGSSESVFPEPC-PELENSSSNSSSTCFSL 213
CS + G S+ V PE C P E + S C+ L
Sbjct: 413 CSYVKGYSDLVQPEACEPLKERIFPDHCSDCYYL 446
>gi|255589944|ref|XP_002535132.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223523955|gb|EEF27252.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 476
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 142/217 (65%), Gaps = 3/217 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSD+VCIEDC I+ G D I++KSGWDEYGI YGRP ++ IRR++ Q+ S + +A GSEM
Sbjct: 246 SSDDVCIEDCFISTGDDLIAIKSGWDEYGILYGRPCRNITIRRLVGQTRSSAGIAIGSEM 305
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S V E I Y+S GI +T+ GRGGY++ I +S+ L ++N+A GN G HP
Sbjct: 306 SGGVSEVHAENILFYNSNTGIRIKTSPGRGGYVRNIYVSNVTLNDVNIAIRFTGNYGEHP 365
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ +DP ALP I++IT + ++G NI AG GI+ F NICLSNISL N S W
Sbjct: 366 DEHYDPKALPIIERITIEHVMGDNIKYAGILDGIEADSFVNICLSNISL--NVTSKFPWN 423
Query: 181 CSNIHGSSESVFPEPC-PELENSSSNSSSTCFSLIRY 216
CS I G SESV PE C P E+ + S C+ L Y
Sbjct: 424 CSYIQGYSESVSPEICEPLRESIPPDHYSNCYHLSNY 460
>gi|302767254|ref|XP_002967047.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
gi|300165038|gb|EFJ31646.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
Length = 478
Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 107/224 (47%), Positives = 143/224 (63%), Gaps = 10/224 (4%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCI DC I+ G D IS+KSGWDE+GI YG P+T+V I V QS + + +AFGSEM
Sbjct: 255 SSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPSTNVCIHNVSGQSPTSAGIAFGSEM 314
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V ++ + + +S +GI +T GRGGYI I ISD +L N++VAF G HP
Sbjct: 315 SGGISDVFIKSVRVANSRSGIRIKTGAGRGGYITNISISDLQLENVSVAFDFTALYGGHP 374
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +DP ALP I I+ +D++G I AG G++EAPF ++C +N+SL + G +W
Sbjct: 375 DDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGLEEAPFRDLCFANVSLSVGAG---AWN 431
Query: 181 CSNIHGSSESVFPEPCPELENSSSN-------SSSTCFSLIRYY 217
CSN +G SE V P PC EL+ +S+CF IR Y
Sbjct: 432 CSNTYGFSERVVPSPCLELDRKQQQDGGFCFGEASSCFEAIRQY 475
>gi|359807069|ref|NP_001241086.1| uncharacterized protein LOC100817309 precursor [Glycine max]
gi|255636991|gb|ACU18828.1| unknown [Glycine max]
Length = 467
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 139/214 (64%), Gaps = 4/214 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSDNVCIEDC I+ G D I++KSGWDEYGIAYGRP+T++ I R L+ + S +A GSEM
Sbjct: 236 SSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHR-LVGRTQTSGIAIGSEM 294
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S V E I YDS N I +T+ GRGGY++ I +S+ L N+++A G G HP
Sbjct: 295 SGGVSEVHAEDIQFYDSYNAIRIKTSPGRGGYVRNIYVSNVTLANVDIAITFTGLYGEHP 354
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD ++P+ALP I++IT KD++G NI AG GI+ F NICLSNI ++N S W
Sbjct: 355 DDAYNPNALPVIEKITIKDVVGENIKTAGLIEGIEGDNFVNICLSNI--ILNVTSNYPWN 412
Query: 181 CSNIHGSSESVFPEPC-PELENSSSNSSSTCFSL 213
CS + G S+ V PE C P E S C+ L
Sbjct: 413 CSYVKGYSDLVQPEACEPLKERIFPGHCSDCYYL 446
>gi|359480238|ref|XP_002273855.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
gi|297744085|emb|CBI37055.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 136/199 (68%), Gaps = 2/199 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS++VCIEDC I+ G D I++KSGWDEYGI+Y RP+T++ IRR++ +++S + +A GSEM
Sbjct: 236 SSNDVCIEDCYISTGDDLIAIKSGWDEYGISYARPSTNIIIRRLVGKTNSSAGIAIGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S V E + ++S GI +T+ GRGGY++ I ISD L ++ +A G G HP
Sbjct: 296 SGGVSEVHAESLQFFNSKTGIRIKTSPGRGGYVRNIYISDMNLVDVKIAIRFTGQYGEHP 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ +DP ALP I+ IT KD++G NI AG GI+ F NICLSNI+L N S + W
Sbjct: 356 DEFYDPTALPIIENITVKDVMGENIKFAGLLEGIEGDNFVNICLSNITL--NVTSESPWN 413
Query: 181 CSNIHGSSESVFPEPCPEL 199
CS IHG S+ V PE C L
Sbjct: 414 CSYIHGYSDLVSPEACEPL 432
>gi|356501839|ref|XP_003519731.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 144/214 (67%), Gaps = 4/214 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSDNVCIEDC I+ G D IS+KSGWD YGI++GRP+T+++IRR++ +++S + +A GSEM
Sbjct: 244 SSDNVCIEDCYISTGDDLISIKSGWDGYGISFGRPSTNINIRRLIGKTTS-AGIAIGSEM 302
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S V E I+++DS + I +T+ GRGGY++ + IS+ L N+++A G G HP
Sbjct: 303 SGGVSEVHAEDIYIFDSHSAIRIKTSPGRGGYVRNVYISNMILANVDIAIRFTGLYGEHP 362
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +DPDALP I++IT KD+IG + AG GI+ F NICLSNI+L N S W
Sbjct: 363 DDTYDPDALPVIERITIKDVIGVKVKHAGLIQGIKGDNFVNICLSNITL--NVSSKLPWN 420
Query: 181 CSNIHGSSESVFPEPC-PELENSSSNSSSTCFSL 213
CS I G S+ V PE C P E S C+ L
Sbjct: 421 CSYIKGFSDLVSPEACEPLKERIFPEHCSDCYYL 454
>gi|356533489|ref|XP_003535296.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/214 (48%), Positives = 143/214 (66%), Gaps = 4/214 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSDNVCIEDC I+ G D IS+KSGWD YGI++GRP+T+++IRR++ +++S + +A GSEM
Sbjct: 244 SSDNVCIEDCYISTGDDLISIKSGWDGYGISFGRPSTNINIRRLIGKTTS-AGIAIGSEM 302
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S V E I+++DS + I +T+ GRGGY++ + IS+ L N+++A G G HP
Sbjct: 303 SGGVSEVHAEDIYIFDSHSAIRIKTSPGRGGYVRNVYISNMILVNVDIAIRFTGLYGEHP 362
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +DPDALP I++IT KD+IG + AG GI+ F NICLSNI+L N W
Sbjct: 363 DDTYDPDALPVIERITIKDVIGEKVKRAGLIQGIKGDNFVNICLSNITL--NVSKKLPWN 420
Query: 181 CSNIHGSSESVFPEPC-PELENSSSNSSSTCFSL 213
CS + G S+ V PE C P E S C+ L
Sbjct: 421 CSYVKGYSDLVSPEACEPLRERIFPEHCSDCYYL 454
>gi|357442057|ref|XP_003591306.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355480354|gb|AES61557.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 601
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 104/214 (48%), Positives = 144/214 (67%), Gaps = 4/214 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSDNVCIEDC I+ G D IS+KSGWDEYGI++GRP+T++ I R+ +++S + +A GSEM
Sbjct: 366 SSDNVCIEDCYISTGDDLISIKSGWDEYGISFGRPSTNISIHRLTGRTTS-AGIAIGSEM 424
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S V E I+++DS + I +T+ GRGGY++ + IS+ L N+++A G G HP
Sbjct: 425 SGGVSEVYAEDIYIFDSKSAIRIKTSPGRGGYVRNVYISNMTLINVDIAIRFTGLYGEHP 484
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D DALP I++IT ++IG NI AG GI+ F +ICLSNI+L N N W
Sbjct: 485 DDSYDRDALPVIERITVVNVIGENIKRAGLIQGIKGDNFVDICLSNITL--NVSKNNPWN 542
Query: 181 CSNIHGSSESVFPEPCPEL-ENSSSNSSSTCFSL 213
CS++ G SE V PE C +L E + S C+ L
Sbjct: 543 CSDVKGYSELVSPESCEQLNERIFPDHVSNCYKL 576
>gi|302755072|ref|XP_002960960.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
gi|300171899|gb|EFJ38499.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
Length = 393
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/199 (50%), Positives = 134/199 (67%), Gaps = 3/199 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCI DC I+ G D IS+KSGWDE+GI YG P+T+V I V QS + + +AFGSEM
Sbjct: 198 SSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPSTNVCIHNVSGQSPTSAGIAFGSEM 257
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V ++ + + +S +GI +T GRGGYI I ISD +L N++VAF G HP
Sbjct: 258 SGGISDVFIKSVRVANSRSGIRIKTGAGRGGYITNISISDLQLENVSVAFDFTALYGGHP 317
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +DP ALP I I+ +D++G I AG G++EAPF ++C +N+SL + G +W
Sbjct: 318 DDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGLEEAPFRDLCFANVSLSVGAG---AWN 374
Query: 181 CSNIHGSSESVFPEPCPEL 199
CSN +G SE V P PC EL
Sbjct: 375 CSNTYGFSERVVPSPCLEL 393
>gi|222636745|gb|EEE66877.1| hypothetical protein OsJ_23693 [Oryza sativa Japonica Group]
Length = 506
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 136/202 (67%), Gaps = 2/202 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I G D + +KSGWDEYGI++ P++++ IR + Q+ + + +AFGSEM
Sbjct: 266 SSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEM 325
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V+ E + +S++GI +T GRGGY+K I I+D + N+++A GN G HP
Sbjct: 326 SGGISDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHP 385
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD++D +ALP I IT K+++G NI AG GIQ F+NICLSN+SL + S + W
Sbjct: 386 DDNYDKNALPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSL--SSKSADPWN 443
Query: 181 CSNIHGSSESVFPEPCPELENS 202
CS I G S SV PE C +L S
Sbjct: 444 CSLIEGFSNSVAPEICEQLRPS 465
>gi|115471367|ref|NP_001059282.1| Os07g0245200 [Oryza sativa Japonica Group]
gi|34393209|dbj|BAC82923.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113610818|dbj|BAF21196.1| Os07g0245200 [Oryza sativa Japonica Group]
Length = 446
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 136/202 (67%), Gaps = 2/202 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I G D + +KSGWDEYGI++ P++++ IR + Q+ + + +AFGSEM
Sbjct: 206 SSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEM 265
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V+ E + +S++GI +T GRGGY+K I I+D + N+++A GN G HP
Sbjct: 266 SGGISDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHP 325
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD++D +ALP I IT K+++G NI AG GIQ F+NICLSN+SL + S + W
Sbjct: 326 DDNYDKNALPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSL--SSKSADPWN 383
Query: 181 CSNIHGSSESVFPEPCPELENS 202
CS I G S SV PE C +L S
Sbjct: 384 CSLIEGFSNSVAPEICEQLRPS 405
>gi|297817560|ref|XP_002876663.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322501|gb|EFH52922.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 139/216 (64%), Gaps = 3/216 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I G D +S+KSGWDEYGI+Y RP++ + I R+ Q++S S +A GSEM
Sbjct: 236 SSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S + ++ +HL++S GI +T+ GRGGY++ + I + +L N+ A G G HP
Sbjct: 296 SGGVSEIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHP 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-W 179
D+ FDP ALPAI++ITF+++ G I +AG GI F NIC N++L + S S W
Sbjct: 356 DEKFDPKALPAIEKITFENVNGDGIGVAGLLEGIAGDEFKNICFLNVTLRVKKNSKKSPW 415
Query: 180 ECSNIHGSSESVFPE-PCPELENS-SSNSSSTCFSL 213
ECSN+ G S+ V PE C L+ S S CF L
Sbjct: 416 ECSNVRGYSQWVSPEITCDSLKESIFPEHQSDCFGL 451
>gi|18412253|ref|NP_567126.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|11762132|gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana]
gi|23397166|gb|AAN31866.1| unknown protein [Arabidopsis thaliana]
gi|332646790|gb|AEE80311.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 471
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 140/216 (64%), Gaps = 3/216 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I G D +S+KSGWDEYGI+Y RP++ + I R+ Q++S S +A GSEM
Sbjct: 236 SSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S + ++ +HL++S GI +T+ GRGGY++ + I + +L N+ A G G HP
Sbjct: 296 SGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHP 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-W 179
D+ +DP ALPAI++ITF+++ G I +AG GI+ F NIC N++L + S S W
Sbjct: 356 DEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNICFLNVTLRVKKNSKKSPW 415
Query: 180 ECSNIHGSSESVFPE-PCPELENS-SSNSSSTCFSL 213
ECSN+ G S+ V PE C L+ S S CF L
Sbjct: 416 ECSNVRGYSQWVSPEITCDSLKESIFPEHGSDCFGL 451
>gi|6899921|emb|CAB71871.1| putative protein [Arabidopsis thaliana]
Length = 470
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 140/216 (64%), Gaps = 3/216 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I G D +S+KSGWDEYGI+Y RP++ + I R+ Q++S S +A GSEM
Sbjct: 235 SSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEM 294
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S + ++ +HL++S GI +T+ GRGGY++ + I + +L N+ A G G HP
Sbjct: 295 SGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHP 354
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-W 179
D+ +DP ALPAI++ITF+++ G I +AG GI+ F NIC N++L + S S W
Sbjct: 355 DEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNICFLNVTLRVKKNSKKSPW 414
Query: 180 ECSNIHGSSESVFPE-PCPELENS-SSNSSSTCFSL 213
ECSN+ G S+ V PE C L+ S S CF L
Sbjct: 415 ECSNVRGYSQWVSPEITCDSLKESIFPEHGSDCFGL 450
>gi|242043478|ref|XP_002459610.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
gi|241922987|gb|EER96131.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
Length = 499
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 134/202 (66%), Gaps = 2/202 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I G D + +KSGWDEYGI++ P++++ IR + Q+ + + +AFGSEM
Sbjct: 253 SSTNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGLAFGSEM 312
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V+ E I + +S++GI +T GRGGY+K + ++D N+++A GN G HP
Sbjct: 313 SGGISDVRAEGIRIVNSVHGIRIKTAPGRGGYVKNVYVADVSFDNVSIAIRITGNYGEHP 372
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD ++ ALP I IT KD++G NI +AG GI F+NICLSN+SL + S + W
Sbjct: 373 DDRYNKSALPTISNITIKDVVGVNIGVAGMLQGIPGDNFSNICLSNVSLSVR--STDPWN 430
Query: 181 CSNIHGSSESVFPEPCPELENS 202
CS + G S SV PE C +L S
Sbjct: 431 CSLVEGYSNSVSPEVCEQLRTS 452
>gi|218199365|gb|EEC81792.1| hypothetical protein OsI_25505 [Oryza sativa Indica Group]
Length = 506
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 135/202 (66%), Gaps = 2/202 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I G D + +KSGWDEYGI++ P++++ IR + Q+ + + +AFGSEM
Sbjct: 266 SSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEM 325
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V+ E + +S++GI +T GRGGY+K I I+D + N+++A GN G HP
Sbjct: 326 SGGISDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHP 385
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD++D + LP I IT K+++G NI AG GIQ F+NICLSN+SL + S + W
Sbjct: 386 DDNYDKNVLPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSL--SSKSADPWN 443
Query: 181 CSNIHGSSESVFPEPCPELENS 202
CS + G S SV PE C +L S
Sbjct: 444 CSLVKGFSNSVAPEICEQLRPS 465
>gi|308080756|ref|NP_001183080.1| uncharacterized protein LOC100501436 precursor [Zea mays]
gi|238009236|gb|ACR35653.1| unknown [Zea mays]
gi|414884141|tpg|DAA60155.1| TPA: hypothetical protein ZEAMMB73_186239 [Zea mays]
Length = 490
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 133/200 (66%), Gaps = 2/200 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC + G D I +KSGWDEYGI++ P++++ IR + Q+ + + +AFGSEM
Sbjct: 246 SSTNVCIEDCYVRNGDDIIVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGLAFGSEM 305
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V+ E + + +S++GI +T GRGGY+K + ++D N+++A GN G HP
Sbjct: 306 SGGISDVRAEGVRIVNSVHGIRIKTAPGRGGYVKNVYVADVSFDNVSIAIRITGNYGEHP 365
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D +ALP I IT KD++G NI +AG GI F+ ICLSN+SL + S + W
Sbjct: 366 DDGYDRNALPTISNITIKDVVGVNIGVAGMLQGIPGDSFSGICLSNVSLSVR--STDPWN 423
Query: 181 CSNIHGSSESVFPEPCPELE 200
CS + G S SV PE C +L
Sbjct: 424 CSLVEGYSSSVSPEVCEQLR 443
>gi|357111082|ref|XP_003557344.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 479
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 133/200 (66%), Gaps = 2/200 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I G D + +KSGWDEYGI++ P++++ I+ + Q+ S + +A GSEM
Sbjct: 237 SSTNVCIEDCYIRNGDDIVVIKSGWDEYGISFAYPSSNISIQNITGQTRSSAGIALGSEM 296
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV+ I + +S++GI +T GRGGY+K + I+D + N+++A N G HP
Sbjct: 297 SGGISNVRAVGIRIVNSVHGIRIKTAPGRGGYVKNVYIADVSMDNVSIAIRITANYGEHP 356
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D +ALP I IT K++IG NI +AG GIQ F+NICLSN++L + S + W
Sbjct: 357 DDKYDKNALPIISNITIKNVIGANIGVAGMLQGIQGDSFSNICLSNVTL--STKSMDPWN 414
Query: 181 CSNIHGSSESVFPEPCPELE 200
CS + G S SV PE C EL
Sbjct: 415 CSLVEGYSNSVSPEICEELR 434
>gi|224064770|ref|XP_002301554.1| predicted protein [Populus trichocarpa]
gi|222843280|gb|EEE80827.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 146/224 (65%), Gaps = 5/224 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSD+VC+EDC ++ G D I++KSGWDEYG++YGRP+ ++ IRR++ Q++S + +A GSEM
Sbjct: 236 SSDDVCVEDCYVSTGDDIIAIKSGWDEYGMSYGRPSKNITIRRLVGQTTS-AGIAIGSEM 294
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S V E + Y+S GI +T+ GRGGY++ I IS+ L ++ A G G HP
Sbjct: 295 SGGVSEVHAENLRFYNSTTGIRIKTSPGRGGYVRNIYISNMSLTDVKTAISFTGRYGEHP 354
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ +DP ALP I++IT +D+ G N+ AG GI+ F +ICL NI+L + S + W
Sbjct: 355 DEYYDPTALPLIERITVEDVAGQNVKYAGLLEGIEGDTFLDICLLNINLSVT--SKSPWN 412
Query: 181 CSNIHGSSESVFPEPC-PELENSSSNSSSTCFSLIRY-YGRASF 222
CS I G S++V PE C P E + S C+S +Y G +SF
Sbjct: 413 CSYIQGYSDTVSPEICEPLRERIFPDHYSDCYSPYKYGNGSSSF 456
>gi|414873754|tpg|DAA52311.1| TPA: hypothetical protein ZEAMMB73_541408 [Zea mays]
Length = 253
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 137/211 (64%), Gaps = 3/211 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCI C + G D I +KSGWDEYGI++ +P++++ I + ++ GS +AFGSEM
Sbjct: 12 SSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSEM 71
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS V+ + + +SL+GI +T GRGGY++ + I+D + N+++A GN G HP
Sbjct: 72 SGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEHP 131
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D ALP I IT KD++G NI +AG GIQ F+NICLSN+SL + S + W
Sbjct: 132 DDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQ--SAHPWN 189
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCF 211
CS I G S SV PE C +L S+ +S C+
Sbjct: 190 CSLIEGYSNSVIPESCEQLR-SNCRQTSICY 219
>gi|168005670|ref|XP_001755533.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693240|gb|EDQ79593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 139/196 (70%), Gaps = 1/196 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I++GHDAI++KSGWDEYG +YG P+ + +RR+ + S + + +AFGSEM
Sbjct: 199 SSHNVCIEDCYISVGHDAIAIKSGWDEYGTSYGMPSKHIDVRRITVHSKTSAGIAFGSEM 258
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V+V+ + ++ + GI F+T GRGGYI+ + + + +++++ A GN G HP
Sbjct: 259 SGGISDVKVDHMMIFGARWGIRFKTGLGRGGYIRNVTVDNVDMHSVGTAIAFTGNYGEHP 318
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D++++ P I+ I+ ++++G NIT AG F G+ E+PF NI L+NI+L + S + W
Sbjct: 319 DENWNRTDYPVIENISIENVVGENITHAGLFLGLPESPFHNIHLANIALDVKSES-DDWN 377
Query: 181 CSNIHGSSESVFPEPC 196
CS++ G+ V+P+PC
Sbjct: 378 CSSVAGTYFFVWPQPC 393
>gi|148909907|gb|ABR18040.1| unknown [Picea sitchensis]
Length = 472
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 139/209 (66%), Gaps = 1/209 (0%)
Query: 5 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGI 64
V IEDC + G D +++KSGWDEYGI++G P+ + IRR++ S + + +A GSEMSGGI
Sbjct: 243 VRIEDCYVVSGDDIVAIKSGWDEYGISFGMPSQHIVIRRLVGISPTSAIIALGSEMSGGI 302
Query: 65 SNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPDDDF 124
+V+ E I +S GI +T+ GRGG++K I ++ + N+ AF G+ GSHPD+ +
Sbjct: 303 QDVRAEDIQAINSETGIRIKTSPGRGGFVKDIFVNRMTMVNMKWAFTMTGSYGSHPDNKY 362
Query: 125 DPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SWECSN 183
DP+ALPA+++I++ +I+ TN+++AG GI APF +ICL+N+++ + S W C+
Sbjct: 363 DPNALPAVERISYSNIVATNVSVAGKLDGIANAPFKDICLTNVTITMAAKSKKYPWNCTY 422
Query: 184 IHGSSESVFPEPCPELENSSSNSSSTCFS 212
IHG S +V+P+PC LE + + C S
Sbjct: 423 IHGLSNAVYPQPCSLLEERPAEGDAFCPS 451
>gi|226497942|ref|NP_001151479.1| polygalacturonase precursor [Zea mays]
gi|195647062|gb|ACG42999.1| polygalacturonase [Zea mays]
Length = 477
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 137/211 (64%), Gaps = 3/211 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCI C + G D I +KSGWDEYGI++ +P++++ I + ++ GS +AFGSEM
Sbjct: 236 SSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS V+ + + +SL+GI +T GRGGY++ + I+D + N+++A GN G HP
Sbjct: 296 SGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEHP 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D ALP I IT KD++G NI +AG GIQ F+NICLSN+SL + S + W
Sbjct: 356 DDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQ--SAHPWN 413
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCF 211
CS I G S SV PE C +L S+ +S C+
Sbjct: 414 CSLIEGYSNSVIPESCEQLR-SNCRQTSICY 443
>gi|223948047|gb|ACN28107.1| unknown [Zea mays]
gi|414873755|tpg|DAA52312.1| TPA: polygalacturonase isoform 1 [Zea mays]
gi|414873756|tpg|DAA52313.1| TPA: polygalacturonase isoform 2 [Zea mays]
Length = 477
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 137/211 (64%), Gaps = 3/211 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCI C + G D I +KSGWDEYGI++ +P++++ I + ++ GS +AFGSEM
Sbjct: 236 SSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS V+ + + +SL+GI +T GRGGY++ + I+D + N+++A GN G HP
Sbjct: 296 SGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEHP 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D ALP I IT KD++G NI +AG GIQ F+NICLSN+SL + S + W
Sbjct: 356 DDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQ--SAHPWN 413
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCF 211
CS I G S SV PE C +L S+ +S C+
Sbjct: 414 CSLIEGYSNSVIPESCEQLR-SNCRQTSICY 443
>gi|242032389|ref|XP_002463589.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
gi|241917443|gb|EER90587.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
Length = 459
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 137/211 (64%), Gaps = 3/211 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCI C + G D I +KSGWDEYGI++ +P++++ I + ++ G+ +AFGSEM
Sbjct: 220 SSTNVCINHCYVRNGDDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGAGIAFGSEM 279
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS V+ + + +SL+GI +T GRGGY+K + I+D + N+++A GN G HP
Sbjct: 280 SGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVKNVYIADVSMDNVSMAIRITGNYGEHP 339
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D ALP I IT KD++G NI +AG GIQ F+NICLSN+SL + S + W
Sbjct: 340 DDKYDRTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQ--SAHPWN 397
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCF 211
CS I G S SV PE C +L+ S+ + C+
Sbjct: 398 CSLIEGYSNSVIPESCEQLK-SNCRQTPICY 427
>gi|224075086|ref|XP_002304552.1| predicted protein [Populus trichocarpa]
gi|222841984|gb|EEE79531.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 138/211 (65%), Gaps = 4/211 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D +++KSGWDEYGIAYGRP++D+ IRR+ SS S +A GSE
Sbjct: 201 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDITIRRIT-GSSPFSGIAVGSET 259
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV VE ++LY+ GI +T GRGG+IK I ++D + N+ G+ G HP
Sbjct: 260 SGGVKNVLVENVNLYNMGVGIHIKTNIGRGGFIKNITVTDVYMENVRKGIKIAGDVGDHP 319
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-W 179
DD F+P+ALP + IT K I G + G+ G++ +PF ICLSNI+L PG +S W
Sbjct: 320 DDSFNPNALPVVYGITLKSIWGEKVQQPGSIQGLKNSPFTGICLSNINLHGVPGPRSSPW 379
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
+CS++ GS+ V P PC EL +S + + +C
Sbjct: 380 KCSDVSGSALLVSPWPCSEL--TSPHQTGSC 408
>gi|297816204|ref|XP_002875985.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297321823|gb|EFH52244.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 138/216 (63%), Gaps = 3/216 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I D +S+K+GWDEYGI+Y RP++ + I R+ Q++S S +A GSEM
Sbjct: 236 SSTNVCIEDCYIVTRDDLVSIKTGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S + ++ +HL++S GI +T+ GRGGY++ + I + +L N+ A G G HP
Sbjct: 296 SGGVSEIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHP 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-W 179
D +FDP ALPAI++ITF+++ G I +AG GI+ F NIC N++L + S S W
Sbjct: 356 DKNFDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDEFKNICFLNVTLRVKKNSKKSPW 415
Query: 180 ECSNIHGSSESVFPE-PCPELENS-SSNSSSTCFSL 213
ECSN+ G S+ V P C L+ S S CF L
Sbjct: 416 ECSNVRGYSQWVSPGITCDSLKESIFPEHRSDCFGL 451
>gi|168058134|ref|XP_001781065.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667462|gb|EDQ54091.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 136/199 (68%), Gaps = 1/199 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS VCIEDC I++G DAI++KSGWDEYG AYG P+ + IRR+++ S + + +AFGSEM
Sbjct: 242 SSQYVCIEDCYISVGDDAIAIKSGWDEYGTAYGMPSQHIDIRRIVVHSETSAGIAFGSEM 301
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V+V+ + ++ + GI F+T GRGGYI+ I + + + ++N A GN G HP
Sbjct: 302 SGGISDVKVDHMMIFGARWGIRFKTGPGRGGYIRNITVDNVNMRSVNTAIAFTGNYGEHP 361
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D++++ P I+ + ++I+G +IT AG F G+ E+PF NI L+NI+L S W
Sbjct: 362 DENWNRTDYPVIENVLIENIVGEDITHAGLFLGLPESPFLNIHLANIALDTKSES-EDWN 420
Query: 181 CSNIHGSSESVFPEPCPEL 199
CS++ G+ V+P+PCP+
Sbjct: 421 CSSVAGTYFFVWPQPCPDF 439
>gi|168006626|ref|XP_001756010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692940|gb|EDQ79295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 423
Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 135/202 (66%), Gaps = 4/202 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSS---GSSVAFG 57
SS +VCIEDC I++G DAIS+KSGWD+YGI+YG P+ + IRR++ S + + V+FG
Sbjct: 216 SSQHVCIEDCYISVGDDAISIKSGWDQYGISYGMPSKHIQIRRIVSASKTFGIHAGVSFG 275
Query: 58 SEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG 117
SEMSGGISNV+V+ + LY + G+ F+T+ GRGGYIK + + + L+++ A N G
Sbjct: 276 SEMSGGISNVKVDDMVLYGARWGVRFKTSPGRGGYIKHVAVHNLLLHSVKTAVAFMANYG 335
Query: 118 SHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN 177
HPDD+++ A P I+ I K+I+G NIT AG G+ E+PF +I L I+L + + N
Sbjct: 336 QHPDDNWNRTAYPVIENIVIKNIVGENITQAGILQGLPESPFRHIHLKTIALDVR-STKN 394
Query: 178 SWECSNIHGSSESVFPEPCPEL 199
W CS + GS V P+PC +L
Sbjct: 395 VWNCSWVSGSYFFVVPQPCADL 416
>gi|224032157|gb|ACN35154.1| unknown [Zea mays]
Length = 430
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/196 (47%), Positives = 129/196 (65%), Gaps = 2/196 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCI C + G D I +KSGWDEYGI++ +P++++ I + ++ GS +AFGSEM
Sbjct: 236 SSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS V+ + + +SL+GI +T GRGGY++ + I+D + N+++A GN G HP
Sbjct: 296 SGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEHP 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D ALP I IT KD++G NI +AG GIQ F+NICLSN+SL + S + W
Sbjct: 356 DDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQ--SAHPWN 413
Query: 181 CSNIHGSSESVFPEPC 196
CS I G S SV PE C
Sbjct: 414 CSLIEGYSNSVIPESC 429
>gi|224130826|ref|XP_002320934.1| predicted protein [Populus trichocarpa]
gi|222861707|gb|EEE99249.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 131/202 (64%), Gaps = 3/202 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSD+VCIEDC I+ G D I++KSGWDEYG +Y RP+ ++ IR ++ Q++S + +A GSEM
Sbjct: 229 SSDDVCIEDCYISTGDDIIAIKSGWDEYGTSYARPSKNITIRGLVGQTTS-AGIAIGSEM 287
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S V E + Y+S GI +T GRGGY++ I IS+ L ++ A G G HP
Sbjct: 288 SGGVSEVHAENLTFYNSTTGIRIKTAPGRGGYVRNIYISNMSLTDVKTAIRFTGQYGDHP 347
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ +DP ALP I++IT D+ G N+ AG G++ F +ICLSNI+L + S + W
Sbjct: 348 DESYDPKALPLIERITIDDVTGQNVKYAGLLEGLEGDTFLDICLSNINLSVT--SKSPWN 405
Query: 181 CSNIHGSSESVFPEPCPELENS 202
CS I G SE+V PE C L +
Sbjct: 406 CSYIQGYSEAVSPEICEPLRET 427
>gi|357122663|ref|XP_003563034.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 475
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 135/200 (67%), Gaps = 2/200 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+CI+ C + G D I +KSGWDEYGI++ P++++ I + ++ G+ +A GSEM
Sbjct: 236 SSTNICIKHCYVRNGDDVIVIKSGWDEYGISFAHPSSNISITNITGETRGGAGIAIGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS V+ E++ + +SL+GI +T GRGGY++ + I+D ++N+++A GN G HP
Sbjct: 296 SGGISEVRAERLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHP 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+++D +ALP I IT ++++G N+ IAG GI+ F++IC+SN+SL + S + W
Sbjct: 356 DNNYDRNALPMISNITIENVVGINVGIAGILEGIEGDNFSSICISNVSLSVQ--SMHPWN 413
Query: 181 CSNIHGSSESVFPEPCPELE 200
CS I G S SV PE C +L
Sbjct: 414 CSLIQGYSNSVIPESCDQLR 433
>gi|302758838|ref|XP_002962842.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
gi|300169703|gb|EFJ36305.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
Length = 439
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 133/210 (63%), Gaps = 3/210 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCI+DC I+ G D I++KSGWDEYGIAYG+P++++HIRRV Q+ G+++A GSE
Sbjct: 224 SSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSNIHIRRVTGQTKRGAAIAIGSET 283
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI NV VE + + +G+ RT GRG YI+ +V+S L +I A G HP
Sbjct: 284 SGGIENVLVEDLVAVSTKSGVSIRTGVGRGAYIRNVVLSSITLLDIQTAITISGFSSEHP 343
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ ++ A P ++++T + + G + G GI E PF +ICL +I+L + G +W+
Sbjct: 344 DNGYNATAFPVVEKVTVRGVTGNTLDRPGRILGIPEVPFRDICLEDIALDASTG-LTAWK 402
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C+++ G S SV P+ C EL S +NS C
Sbjct: 403 CTDVEGYSSSVTPKICKEL--SENNSPDAC 430
>gi|168053514|ref|XP_001779181.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669440|gb|EDQ56027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 134/196 (68%), Gaps = 1/196 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +VCIEDC I++G DAIS+KSGWD++G ++ P+ + ++R+L S S + ++FGSEM
Sbjct: 198 SSQHVCIEDCYISVGDDAISIKSGWDQFGTSFAMPSKHIKVQRILAFSRSSAGISFGSEM 257
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V+V+ + + + G+ +T GRGGY++ I + + L++I A GN G HP
Sbjct: 258 SGGISDVKVDGMVVTGARWGVRIKTAVGRGGYVRGISVKNIVLHSIRTAIAVMGNYGEHP 317
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D++++ A P I+ I K+I+G NI AG F G+QE+PF +I L+NI+L +N + W
Sbjct: 318 DENWNRTAYPLIEDIRMKNIVGENINQAGLFLGLQESPFRDIHLANIALQVNT-TKQIWN 376
Query: 181 CSNIHGSSESVFPEPC 196
CS++ GS VFP+PC
Sbjct: 377 CSDVAGSYIFVFPQPC 392
>gi|225426168|ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 480
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 126/211 (59%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D I++KSGWDEYGIAYG PT + IRR+ S +++A GSEM
Sbjct: 246 SCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSATIALGSEM 305
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I D+ +G+ +T GRGGY+K I + + + AF GN GSH
Sbjct: 306 SGGIEDVRAEDILAIDTESGVRIKTAVGRGGYVKDIYVRSMIMKTMKWAFWMTGNYGSHA 365
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D+++DP+ALPAI I ++D++ N+T+AG GI PF IC+SN+++ L W
Sbjct: 366 DNNYDPNALPAIQGINYRDMVAENVTMAGRLEGISGDPFTGICISNVTIGLAKKAKKAPW 425
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C++I G + V P+PC L + C
Sbjct: 426 TCTDIAGITSGVVPQPCDLLPDQGPEKIVAC 456
>gi|449452247|ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
gi|449501789|ref|XP_004161459.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 445
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 132/207 (63%), Gaps = 4/207 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS+NVCIED I+ G D +++KSGWDEYGIAYGR + D+ IRR+ SS + VA GSE
Sbjct: 234 SSNNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRIS-GSSPFAGVAVGSEA 292
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG++NV E ++ YD GI +T GRGG+IK I +S+ + N G+ G HP
Sbjct: 293 SGGVANVLAEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHP 352
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL--LINPGSYNS 178
DD FDP+ALP + IT K+I G N+ AG+ G++++PF ICLSNI+L P S
Sbjct: 353 DDKFDPNALPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSV-P 411
Query: 179 WECSNIHGSSESVFPEPCPELENSSSN 205
W CS + G++ V P PC EL ++ +
Sbjct: 412 WTCSYVSGAASLVSPWPCSELTSTDQD 438
>gi|15238207|ref|NP_199002.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|10177371|dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|50897172|gb|AAT85725.1| At5g41870 [Arabidopsis thaliana]
gi|332007355|gb|AED94738.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 131/210 (62%), Gaps = 6/210 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D +++KSGWDEYGIAY RP+ D+ IRR+ SS + +A GSE
Sbjct: 239 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNRPSRDITIRRIT-GSSPFAGIAIGSET 297
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI NV VE I LY+S GI +T GRGG I+ I IS L + G+ G HP
Sbjct: 298 SGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTGIKISGDTGDHP 357
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-- 178
DD F+ ALP + IT K++ G + AG G++++PF N+C SN++L G+ S
Sbjct: 358 DDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNLCFSNVTLT---GTKRSPI 414
Query: 179 WECSNIHGSSESVFPEPCPELENSSSNSSS 208
W+CS++ G+++ V P PCPEL ++ S
Sbjct: 415 WKCSDVVGAADKVNPTPCPELSATTQQGGS 444
>gi|115456423|ref|NP_001051812.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|40714685|gb|AAR88591.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|108711938|gb|ABF99733.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108711939|gb|ABF99734.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113550283|dbj|BAF13726.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|215694675|dbj|BAG89866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 134/200 (67%), Gaps = 2/200 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCI+ C + G D I +KSGWDEYGI++ RP+T++ I + ++ G+ +AFGSEM
Sbjct: 236 SSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISNITGETRGGAGIAFGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS V+ E + + +S++GI +T GRGGY+K + ISD + N+++A GN G HP
Sbjct: 296 SGGISEVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSMDNVSMAIRITGNFGEHP 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D +ALP I IT ++++G N+ +AG GI+ F++ICLSN+SL + S + W
Sbjct: 356 DDKYDRNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSICLSNVSLSVQ--SMHPWN 413
Query: 181 CSNIHGSSESVFPEPCPELE 200
CS I G S SV PE C +L
Sbjct: 414 CSLIEGYSNSVIPESCEQLR 433
>gi|242053639|ref|XP_002455965.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
gi|241927940|gb|EES01085.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
Length = 447
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 128/206 (62%), Gaps = 2/206 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+CIEDC I+ G DAI++KSGWDEYGIAYGRP++D+ +RR+ SS + A GSE
Sbjct: 238 SSSNICIEDCYISTGDDAIAIKSGWDEYGIAYGRPSSDITVRRIT-GSSPFAGFAVGSET 296
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV E ++ + S GI +T GRGG+I+ + +SD L N+ G+ G+HP
Sbjct: 297 SGGVENVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDNVRYGLRIVGDVGNHP 356
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ ++ ALP +D +T K++ G NI AG GI + F+ ICLSN+ L W+
Sbjct: 357 DERYNRSALPIVDALTIKNVQGQNIKEAGLIKGIANSAFSRICLSNVK-LTGGAPVQPWK 415
Query: 181 CSNIHGSSESVFPEPCPELENSSSNS 206
C + G + V P PC EL ++S S
Sbjct: 416 CEAVSGGALDVQPSPCTELTSTSGTS 441
>gi|224096000|ref|XP_002310517.1| predicted protein [Populus trichocarpa]
gi|222853420|gb|EEE90967.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 131/210 (62%), Gaps = 3/210 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I G D +++KSGWD+YGI RP++++ +RRV + + S V GSEM
Sbjct: 228 SSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIVVRRVSGTTPTCSGVGIGSEM 287
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI N+ +E +H++DS G+ +T GRGGYI I IS+ + + V HP
Sbjct: 288 SGGIFNITIEDLHVWDSAAGVRIKTDNGRGGYIANITISNVTMERVKVPIRFSRGSNDHP 347
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ +DP A+P + I+ +++I N T A G+++APF IC+ N+SLL S SW
Sbjct: 348 DEGWDPKAVPVVKGISIRNVISFNSTKAPVLEGVEDAPFGGICMKNVSLLGVVSSL-SWH 406
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C + G ++ VFP PCP+L+ S+ SSS C
Sbjct: 407 CEFVSGFADEVFPTPCPQLQ--SNISSSWC 434
>gi|224083446|ref|XP_002307030.1| predicted protein [Populus trichocarpa]
gi|222856479|gb|EEE94026.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 124/200 (62%), Gaps = 1/200 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I G D +++KSGWD+YGI RP++++ IRRV + + S V GSEM
Sbjct: 194 SSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIIIRRVSGTTPTCSGVGIGSEM 253
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI NV +E +H++DS G+ +T KGRGGYI I ISD + + + HP
Sbjct: 254 SGGIFNVTIEDLHVWDSAAGVRIKTDKGRGGYIANITISDITMERVKIPIRFSSGSNDHP 313
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ +DP A+P + ++ +++ N T A GI++APF IC+ NISLL S SW
Sbjct: 314 DERWDPKAVPVVKGVSITNLVSFNSTKAPVLEGIEDAPFGGICMKNISLL-GVVSSPSWR 372
Query: 181 CSNIHGSSESVFPEPCPELE 200
C + G + VFP PCP+L+
Sbjct: 373 CEFVSGFANDVFPTPCPQLQ 392
>gi|255537765|ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223549848|gb|EEF51336.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 446
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 131/208 (62%), Gaps = 2/208 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D +++KSGWDEYGIAYGRP++ + IRR+ SS + +A GSE
Sbjct: 235 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSHITIRRIT-GSSPFAGIAVGSET 293
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ +V E I+LYD G+ +T GRGG+I+ I SD + N G+ G HP
Sbjct: 294 SGGVEHVLAENINLYDMGVGLHVKTNIGRGGFIRNITFSDVYMKNARKGIKIAGDVGDHP 353
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-W 179
DD+++P+ALP + I F+ + G N+ G G++ +PF ICLSNI+L PG ++ W
Sbjct: 354 DDNYNPNALPVVKGIIFRGVWGENVLQPGAIQGLKSSPFTGICLSNINLHGVPGPRSTPW 413
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSS 207
+CS++ G++ V P PC EL + S
Sbjct: 414 KCSDVSGAALEVSPFPCSELATTHQTGS 441
>gi|108711940|gb|ABF99735.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|218194041|gb|EEC76468.1| hypothetical protein OsI_14200 [Oryza sativa Indica Group]
gi|222626115|gb|EEE60247.1| hypothetical protein OsJ_13254 [Oryza sativa Japonica Group]
Length = 460
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 134/200 (67%), Gaps = 2/200 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCI+ C + G D I +KSGWDEYGI++ RP+T++ I + ++ G+ +AFGSEM
Sbjct: 220 SSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISNITGETRGGAGIAFGSEM 279
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS V+ E + + +S++GI +T GRGGY+K + ISD + N+++A GN G HP
Sbjct: 280 SGGISEVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSMDNVSMAIRITGNFGEHP 339
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D +ALP I IT ++++G N+ +AG GI+ F++ICLSN+SL + S + W
Sbjct: 340 DDKYDRNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSICLSNVSLSVQ--SMHPWN 397
Query: 181 CSNIHGSSESVFPEPCPELE 200
CS I G S SV PE C +L
Sbjct: 398 CSLIEGYSNSVIPESCEQLR 417
>gi|302815490|ref|XP_002989426.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
gi|300142820|gb|EFJ09517.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
Length = 439
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 133/207 (64%), Gaps = 2/207 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCI+DC I+ G D I++KSGWDEYGIAYG+P++++HIRRV Q+ G+++A GSE
Sbjct: 224 SSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSNIHIRRVTGQTKRGAAIAIGSET 283
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI NV VE + + +GI RT GRG YI+ +V+S L +I A G HP
Sbjct: 284 SGGIENVLVEDLVAVSTKSGISIRTGVGRGAYIRNVVLSSITLLDIQTAITISGFSSEHP 343
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ F+ A P ++++T + + G + G GI E PF +ICL +I+L G +W+
Sbjct: 344 DNGFNATAFPVVEKVTVRGVTGNTLDRPGRILGIPEVPFRDICLEDIALDATTG-LTAWK 402
Query: 181 CSNIHGSSESVFPEPCPEL-ENSSSNS 206
C+++ G S SV P+ C +L EN++ ++
Sbjct: 403 CTDVEGYSSSVTPKICSQLSENNTPDA 429
>gi|15236625|ref|NP_194113.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4454051|emb|CAA23048.1| putative polygalacturonase [Arabidopsis thaliana]
gi|7269231|emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana]
gi|17065242|gb|AAL32775.1| putative polygalacturonase [Arabidopsis thaliana]
gi|22136230|gb|AAM91193.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332659410|gb|AEE84810.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 444
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 135/212 (63%), Gaps = 2/212 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D +++KSGWD+YGIAYGRP++++ IRR+ SS + +A GSE
Sbjct: 234 SSYNVCIEDSYISTGDDLVAIKSGWDQYGIAYGRPSSNITIRRIT-GSSPFAGIAIGSET 292
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI N+ E I L + G+ +T GRGGYIK I ISD + G+ G HP
Sbjct: 293 SGGIKNIIAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYVDTAKYGIKIAGDTGDHP 352
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D++++P+ALP + I K++ G N+ AG+ G++ +PF ICLS I+L + SY +W+
Sbjct: 353 DENYNPNALPVVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLNSYKTWK 412
Query: 181 CSNIHGSSESVFPEPCPELENS-SSNSSSTCF 211
CS++ G+S V P PC EL + SN S+ F
Sbjct: 413 CSDVSGTSLKVSPWPCSELRTTGGSNLCSSTF 444
>gi|297799608|ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313524|gb|EFH43947.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 135/212 (63%), Gaps = 2/212 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D +++KSGWDEYGIAYGRP++++ IRR+ SS + +A GSE
Sbjct: 234 SSYNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSNITIRRIT-GSSPFAGIAIGSET 292
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI N+ E I L + G+ +T GRGGYIK I ISD + G+ G HP
Sbjct: 293 SGGIKNIVAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYIDTAKYGIKIAGDTGDHP 352
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D++++P+ALP + I K++ G N+ AG+ G++ +PF ICLS I+L + SY +W+
Sbjct: 353 DENYNPNALPIVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLNSYKTWK 412
Query: 181 CSNIHGSSESVFPEPCPELENS-SSNSSSTCF 211
CS++ G+S V P PC EL + S S S+ F
Sbjct: 413 CSDVIGTSLKVSPWPCSELRTTGGSYSCSSTF 444
>gi|109509134|gb|ABG34276.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 241
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 124/211 (58%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D +++KSGWDEYGIAYG PT + IRR+ S + + +A GSEM
Sbjct: 7 SCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPTSAVIALGSEM 66
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I +S +G+ +T GRGGY+K I + + + F GN GSH
Sbjct: 67 SGGIEDVRAEDILAINSESGVRIKTAIGRGGYVKDIYVKGMTMRTMKWVFWMTGNYGSHA 126
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D+++DP+ALP I I ++D++ N+T+A GI PF IC+SN+++ L W
Sbjct: 127 DNNYDPNALPLIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIGLAQKPKKLQW 186
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C++I G S SV P+PC L N C
Sbjct: 187 NCTDISGISSSVVPQPCNALPNQGPEKLPAC 217
>gi|186701223|gb|ACC91250.1| glycoside hydrolase family 28 protein [Arabidopsis halleri]
Length = 444
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 130/202 (64%), Gaps = 1/202 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D +++KSGWDEYGIAYGRP++++ IRR+ SS + +A GSE
Sbjct: 234 SSYNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSNITIRRIT-GSSPFAGIAIGSET 292
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI N+ E I L + G+ +T GRGGYIK I ISD + G+ G HP
Sbjct: 293 SGGIKNIVAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYIDTAKYGIKITGDTGDHP 352
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D++++P+ALP + I K++ G N+ AG+ G++ +PF ICLS I+L + SY +W+
Sbjct: 353 DENYNPNALPIVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSLNSYKTWK 412
Query: 181 CSNIHGSSESVFPEPCPELENS 202
CS++ G+S V P PC EL +
Sbjct: 413 CSDVIGTSLKVSPWPCSELRTT 434
>gi|255537567|ref|XP_002509850.1| polygalacturonase, putative [Ricinus communis]
gi|223549749|gb|EEF51237.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 128/211 (60%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D +++KSGWDEYGI++G PT + IRR+ S + +++A GSEM
Sbjct: 246 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPTSAAIALGSEM 305
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I ++ +G+ +T+ GRGGY+K I + ++ + F GN GSHP
Sbjct: 306 SGGIQDVRAEDITCINTESGVRIKTSVGRGGYVKDIYVRKMTMHTMKWVFWMTGNYGSHP 365
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D+++DP+A+P I+ I ++DI+ N+T+A GI PF IC+SN+++ L W
Sbjct: 366 DNNYDPNAIPVIENINYRDIVAENVTMAARLEGIAGDPFTGICISNVTIGLAQKPKKLQW 425
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C++I G S V P+PC L + C
Sbjct: 426 NCTDIAGISSGVTPKPCSLLPEQEKEKIADC 456
>gi|224071986|ref|XP_002303605.1| predicted protein [Populus trichocarpa]
gi|222841037|gb|EEE78584.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 124/211 (58%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I+DC I G D +++KSGWDEYGIA+G PT V IRR+ S + + +A GSEM
Sbjct: 237 SCTNTKIQDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAVIALGSEM 296
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I DS +G+ +T GRGGY+K I + L + F GN GSHP
Sbjct: 297 SGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHP 356
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D+++DP+A+P I I ++D++ N+T+A GI PF IC+SN+++ L W
Sbjct: 357 DNNYDPNAIPVIQNINYRDVVAENVTMAARLEGIAGDPFTGICISNVTIGLARNRKKLQW 416
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
CS++ G + V P+PC L + C
Sbjct: 417 NCSDVAGITSEVTPKPCDLLSDQGPGKIGAC 447
>gi|168046254|ref|XP_001775589.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673007|gb|EDQ59536.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 131/205 (63%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS VCIEDC I++G DAIS+KSGWD+YG +G P+ + I+RV+ S + + ++FGSEM
Sbjct: 278 SSQYVCIEDCYISVGDDAISIKSGWDQYGTGFGMPSKYIRIQRVVAFSHTSAGISFGSEM 337
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+++V+ + + +S G+ F+T+ GRG YI+ + +++ ++ + A GN G HP
Sbjct: 338 SGGISDIEVDDMVITNSRWGVRFKTSVGRGAYIRNVTVNNIVMHTVRTAIAVMGNYGEHP 397
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D++++ A P I+ I +I+G NIT AG G+ +APF +I L+ + L W
Sbjct: 398 DENWNRTAYPVIENILVGNIVGENITQAGLLLGLPDAPFHDIHLTKVVLDTRTTKQGPWN 457
Query: 181 CSNIHGSSESVFPEPCPELENSSSN 205
CS + G V P+PCPEL +SN
Sbjct: 458 CSWVTGFYNFVLPKPCPELTMENSN 482
>gi|357135554|ref|XP_003569374.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 448
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 131/208 (62%), Gaps = 6/208 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I+ G D +++KSGWDEYGIAYGRP++D+ +RR+ SS + A GSE
Sbjct: 239 SSSNVCIEDCYISTGDDLVAIKSGWDEYGIAYGRPSSDITVRRIT-GSSPFAGFAVGSET 297
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV E ++ + S G+ +T GRGG+I+ + +SD L N+ G+ G HP
Sbjct: 298 SGGVENVLAEHLNFFSSGFGVHIKTNSGRGGFIRNVTVSDVTLDNVRYGLRIAGDVGDHP 357
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGS--YNS 178
D+ ++ +ALP +D +T K++ G NI AG+ GI + F+ ICLSNI L GS
Sbjct: 358 DEHYNHNALPKVDSLTIKNVQGQNIKEAGSIKGIASSAFSRICLSNIKLH---GSVPVRP 414
Query: 179 WECSNIHGSSESVFPEPCPELENSSSNS 206
W+C ++ G + + P PC EL ++S S
Sbjct: 415 WKCESVSGGALDLQPSPCTELTSTSGTS 442
>gi|224151097|ref|XP_002337059.1| predicted protein [Populus trichocarpa]
gi|222837934|gb|EEE76299.1| predicted protein [Populus trichocarpa]
Length = 356
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 124/211 (58%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I+DC I G D +++KSGWDEYGIA+G PT V IRR+ S + + +A GSEM
Sbjct: 123 SCTNTKIQDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAVIALGSEM 182
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I DS +G+ +T GRGGY+K I + L + F GN GSHP
Sbjct: 183 SGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHP 242
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D+++DP+A+P I I ++D++ N+T+A GI PF IC+SN+++ L W
Sbjct: 243 DNNYDPNAIPVIQNINYRDVVAENVTMAARLEGIAGDPFTGICISNVTIGLARNRKKLQW 302
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
CS++ G + V P+PC L + C
Sbjct: 303 NCSDVAGITSEVTPKPCDLLSDQGPGKIGAC 333
>gi|125526876|gb|EAY74990.1| hypothetical protein OsI_02888 [Oryza sativa Indica Group]
Length = 445
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 131/207 (63%), Gaps = 4/207 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I+ G D I++KSGWDEYG+AYGRP++ + IRR+ SS + A GSE
Sbjct: 236 SSSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRIT-GSSPFAGFAVGSET 294
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ +V E ++ + S GI +T GRGG+I+ + +SD L ++ G+ G HP
Sbjct: 295 SGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHP 354
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPG-SYNSW 179
DD +D +ALP +D +T K++ G NI AG+ GI + F+ ICLSN+ L N G + W
Sbjct: 355 DDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKL--NGGAAVRPW 412
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNS 206
+C + G++ V P PC EL ++S S
Sbjct: 413 KCEAVSGAALDVQPSPCTELTSTSGMS 439
>gi|297801376|ref|XP_002868572.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314408|gb|EFH44831.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 182 bits (462), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 127/208 (61%), Gaps = 2/208 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D +++KSGWDEYGIAY P+ D+ IRR+ SS + +A GSE
Sbjct: 239 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNLPSRDITIRRIT-GSSPFAGIAIGSET 297
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI NV VE I LY+S GI +T GRGG I+ I IS L + G+ G HP
Sbjct: 298 SGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTGIKISGDTGDHP 357
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD F+ ALP + IT K++ G + AG G++++PF N+C SN++ L S W+
Sbjct: 358 DDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNLCFSNVT-LTGTKSTPIWK 416
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSS 208
CS++ G++ V P PCPEL ++ S
Sbjct: 417 CSDVVGAASKVNPTPCPELTTTTQQGGS 444
>gi|356513351|ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 469
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 122/211 (57%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D +++KSGWDEYGIAYG PT + IRR+ S + +A GSEM
Sbjct: 236 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSAVIALGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I +S +G+ +T GRGGY+K I + + + AF GN GSH
Sbjct: 296 SGGIQDVRAEDIVAINSESGVRIKTAVGRGGYVKDIFVRRMTMKTMKWAFWMTGNYGSHA 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
DD++DP+ALP I I ++D++ N+T+A GI PF IC+SN+++ L W
Sbjct: 356 DDNYDPNALPVIQNINYRDMVAENVTMAARLEGISGDPFTGICISNVTIQLAKKAKKVPW 415
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C++I G S V P PC L + C
Sbjct: 416 TCTDIAGISSDVTPAPCGLLPDQGEEKIGAC 446
>gi|297742322|emb|CBI34471.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 132/213 (61%), Gaps = 4/213 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D +++KSGWDEYGIAYGRP++ + IRR+ SS + +A GSE
Sbjct: 236 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSGITIRRIT-GSSPFAGIAVGSET 294
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV E I+LY+ GI +T GRGG I+ I +S+ + G+ G HP
Sbjct: 295 SGGVQNVFAEHINLYNMGVGIHLKTNIGRGGVIRNITVSNVYMEKARTGIKIAGDVGDHP 354
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL--LINPGSYNS 178
DD+F+P+ALP + + +D+ G ++ G+ G++ +PF ICLS I+L I PG+
Sbjct: 355 DDNFNPNALPVVKGVVIRDVWGLDVLQPGSIIGLKNSPFTGICLSKINLHGKIKPGT-AP 413
Query: 179 WECSNIHGSSESVFPEPCPELENSSSNSSSTCF 211
W+CS++ G++ V P PC EL + S + F
Sbjct: 414 WKCSDVSGAAVGVSPWPCSELTSPGQTGSCSSF 446
>gi|224134791|ref|XP_002327490.1| predicted protein [Populus trichocarpa]
gi|222836044|gb|EEE74465.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 120/205 (58%), Gaps = 3/205 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IED + G D I++KSGWDEYGI +GRPT + IRR S +++A GSEM
Sbjct: 225 SSSNVRIEDSFVVSGDDCIAVKSGWDEYGIKFGRPTQHLVIRRFTCISPDSATIALGSEM 284
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I + +G+ +T GRG Y+K I + L + AF G+ GSHP
Sbjct: 285 SGGIQDVRAEDITALSTQSGVRIKTAVGRGAYVKDIFVRRMTLKTMKYAFWMTGSYGSHP 344
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLS--NISLLINPGSYNS 178
D +DP ALP I I++KDI+ N+T + GI+ PF IC+S NISL P
Sbjct: 345 DTGYDPKALPEIKGISYKDIVAENVTYSARLEGIENDPFTGICISNVNISLTQKPKELQ- 403
Query: 179 WECSNIHGSSESVFPEPCPELENSS 203
W C++I G S V P+PC L S
Sbjct: 404 WNCTDIQGVSSKVTPQPCAALLEKS 428
>gi|356530050|ref|XP_003533597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 122/211 (57%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IEDC I G D +++KSGWDEYGI +G PT + IRR+ S +++A GSEM
Sbjct: 248 SCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLMIRRLTCISPYSATIALGSEM 307
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I + +G+ +T GRGGY+K I + L+ + AF G+ SH
Sbjct: 308 SGGIQDVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTLHTMKWAFKMTGDYNSHA 367
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D +DP+ALP I I ++D++ N+TIA F GI PF IC++N++L + W
Sbjct: 368 DSHYDPNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGICIANVTLRMAAKAKKQPW 427
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C++I G + V P PC L + + C
Sbjct: 428 TCTDIEGMTSGVTPPPCGLLPDQGPEKITAC 458
>gi|125571200|gb|EAZ12715.1| hypothetical protein OsJ_02632 [Oryza sativa Japonica Group]
Length = 419
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 131/209 (62%), Gaps = 4/209 (1%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S NVCIEDC I+ G D I++KSGWDEYG+AYGRP++ + IRR+ SS + A GSE S
Sbjct: 211 SSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRIT-GSSPFAGFAVGSETS 269
Query: 62 GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPD 121
GG+ +V E ++ + S GI +T GRGG+I+ + +SD L ++ G+ G HPD
Sbjct: 270 GGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPD 329
Query: 122 DDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPG-SYNSWE 180
D +D +ALP +D +T K++ G NI AG+ GI + F+ ICLSN+ L N G + W+
Sbjct: 330 DRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKL--NGGAAVRPWK 387
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSST 209
C + G++ V P PC EL ++S S T
Sbjct: 388 CEAVSGAALDVQPSPCTELTSTSGMSFCT 416
>gi|54290861|dbj|BAD61522.1| polygalacturonase-like [Oryza sativa Japonica Group]
Length = 261
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/210 (44%), Positives = 132/210 (62%), Gaps = 4/210 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I+ G D I++KSGWDEYG+AYGRP++ + IRR+ SS + A GSE
Sbjct: 52 SSSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRIT-GSSPFAGFAVGSET 110
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ +V E ++ + S GI +T GRGG+I+ + +SD L ++ G+ G HP
Sbjct: 111 SGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHP 170
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPG-SYNSW 179
DD +D +ALP +D +T K++ G NI AG+ GI + F+ ICLSN+ L N G + W
Sbjct: 171 DDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKL--NGGAAVRPW 228
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSST 209
+C + G++ V P PC EL ++S S T
Sbjct: 229 KCEAVSGAALDVQPSPCTELTSTSGMSFCT 258
>gi|297597216|ref|NP_001043594.2| Os01g0618900 [Oryza sativa Japonica Group]
gi|54290860|dbj|BAD61521.1| polygalacturonase-like [Oryza sativa Japonica Group]
gi|255673471|dbj|BAF05508.2| Os01g0618900 [Oryza sativa Japonica Group]
Length = 308
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/210 (44%), Positives = 132/210 (62%), Gaps = 4/210 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I+ G D I++KSGWDEYG+AYGRP++ + IRR+ SS + A GSE
Sbjct: 99 SSSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRIT-GSSPFAGFAVGSET 157
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ +V E ++ + S GI +T GRGG+I+ + +SD L ++ G+ G HP
Sbjct: 158 SGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHP 217
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPG-SYNSW 179
DD +D +ALP +D +T K++ G NI AG+ GI + F+ ICLSN+ L N G + W
Sbjct: 218 DDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKL--NGGAAVRPW 275
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSST 209
+C + G++ V P PC EL ++S S T
Sbjct: 276 KCEAVSGAALDVQPSPCTELTSTSGMSFCT 305
>gi|115445377|ref|NP_001046468.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|50251675|dbj|BAD29699.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|50252020|dbj|BAD27952.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113535999|dbj|BAF08382.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|215686497|dbj|BAG87758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765347|dbj|BAG87044.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622550|gb|EEE56682.1| hypothetical protein OsJ_06128 [Oryza sativa Japonica Group]
Length = 443
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 130/206 (63%), Gaps = 6/206 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D +++KSGWDEYGIAYGRP++ + IRRV SS S +A GSE
Sbjct: 236 SSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRRVR-GSSPFSGIAIGSEA 294
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+SNV VE +++S GI +T GRGG+I+ I + + + ++ G+ G HP
Sbjct: 295 SGGVSNVLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDNVRMNSVRNGLRIAGDVGDHP 354
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN--S 178
D+ F ALP +D ++ K++ G N+ G+ GI+ +PF ICL+N+ L G N +
Sbjct: 355 DEHFSQLALPTVDAVSIKNVWGVNVQQPGSIEGIRNSPFTRICLANVKLF---GWRNNAA 411
Query: 179 WECSNIHGSSESVFPEPCPELENSSS 204
W+C ++HG++ V P PC EL S S
Sbjct: 412 WKCRDVHGAALGVQPGPCAELTTSLS 437
>gi|255571381|ref|XP_002526639.1| polygalacturonase, putative [Ricinus communis]
gi|223534031|gb|EEF35751.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 127/206 (61%), Gaps = 1/206 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I G D +++KSGWD+YGI RP++ + +RRV + + S V GSEM
Sbjct: 271 SSTNVCIEDCYIESGDDLVAVKSGWDQYGIKTARPSSHIIVRRVSGTTPTCSGVGIGSEM 330
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI NV ++ +H++DS G+ +T GRGGYI I + + + + + HP
Sbjct: 331 SGGIFNVMIQDLHIWDSAAGVRIKTDIGRGGYISNITLHNITMERVKIPIRFSRGSNDHP 390
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ +DP+A+P + ++ ++I N T A GI++APF IC+ N++ L+ S SW
Sbjct: 391 DERWDPNAIPVVKGVSISNVICVNSTKAPVLQGIKDAPFGGICMKNVT-LVGLASSTSWH 449
Query: 181 CSNIHGSSESVFPEPCPELENSSSNS 206
C + G + VFP PCP+L+N+ S+S
Sbjct: 450 CEFVSGFANEVFPMPCPQLQNNDSSS 475
>gi|224058441|ref|XP_002299511.1| predicted protein [Populus trichocarpa]
gi|222846769|gb|EEE84316.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 125/211 (59%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D +++KSGWDEYGI++G PT + IRR+ S + + +A GSEM
Sbjct: 246 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPTSAVIALGSEM 305
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I DS +G+ +T GRGGY+K I + L + F GN GSHP
Sbjct: 306 SGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHP 365
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SW 179
D+++DP+A+P I I ++D++ N+T+A GI PF IC+SN+++ + S W
Sbjct: 366 DNNYDPNAIPVIQNINYRDVVAENVTMAAKLEGIAGDPFTGICISNVTIGLAQNSKKLQW 425
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C+++ G + V P+PC L + C
Sbjct: 426 NCTDVAGITSEVNPKPCALLPDQGPGKIGGC 456
>gi|356568425|ref|XP_003552411.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 122/211 (57%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IEDC I G D +++KSGWDEYGI +G PT + IRR+ S +++A GSEM
Sbjct: 248 SCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPYSATIALGSEM 307
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I + +G+ +T GRGGY+K I + L+ + AF G+ SH
Sbjct: 308 SGGIQDVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTLHTMKWAFKMTGDYNSHA 367
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D +DP+ALP I I ++D++ N+TIA F GI PF IC++N++L + W
Sbjct: 368 DGHYDPNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGICIANVTLRMAAKAKKQPW 427
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C++I G + V P PC L + + C
Sbjct: 428 TCTDIEGMTSGVTPPPCGLLPDQGPEKITAC 458
>gi|356528677|ref|XP_003532926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 121/205 (59%), Gaps = 1/205 (0%)
Query: 7 IEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISN 66
IEDC I G D +++KSGWDEYGIAYG PT + IRR+ S +++A GSEMSGGI +
Sbjct: 267 IEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSAAIALGSEMSGGIQD 326
Query: 67 VQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPDDDFDP 126
++ E I ++ +G+ +T GRGGY+K I + + + AF GN GSH DD++DP
Sbjct: 327 MRAEDIVAINTESGVRIKTAVGRGGYVKDIFVRRMTMKTMKWAFWMTGNYGSHADDNYDP 386
Query: 127 DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSWECSNIH 185
+ALP I I ++D++ N+T+A GI PF IC+SN+++ L W C++I
Sbjct: 387 NALPVIQNINYRDMVAENVTMAARLEGISGDPFTGICISNVTIQLAKKAKKVPWTCTDIA 446
Query: 186 GSSESVFPEPCPELENSSSNSSSTC 210
G S V P PC L + C
Sbjct: 447 GISSDVTPAPCDLLPDQGEEKIGAC 471
>gi|296088539|emb|CBI37530.3| unnamed protein product [Vitis vinifera]
Length = 528
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 132/212 (62%), Gaps = 5/212 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I G D +++KSGWD+YGIA RP++++ +RR+ + + S V GSEM
Sbjct: 270 SSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRRLSGTTPTCSGVGIGSEM 329
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV +E +H++DS G+ +T KGRGGY+ I I++ + + V HP
Sbjct: 330 SGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIRMERVKVPIRFSRGSNDHP 389
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLL-INPGSYNSW 179
DD +DP A+P I I +++ N T A GI+ AP+ IC+ N++LL + P + W
Sbjct: 390 DDGWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGICMKNVTLLGLAPAA--KW 447
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTCF 211
C + G +++VFP CP+++ S+ SSS C
Sbjct: 448 HCEFVSGFTDAVFPVSCPQMQ--SNVSSSWCL 477
>gi|225431447|ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 488
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 132/212 (62%), Gaps = 5/212 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I G D +++KSGWD+YGIA RP++++ +RR+ + + S V GSEM
Sbjct: 270 SSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRRLSGTTPTCSGVGIGSEM 329
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV +E +H++DS G+ +T KGRGGY+ I I++ + + V HP
Sbjct: 330 SGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIRMERVKVPIRFSRGSNDHP 389
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLL-INPGSYNSW 179
DD +DP A+P I I +++ N T A GI+ AP+ IC+ N++LL + P + W
Sbjct: 390 DDGWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGICMKNVTLLGLAPAA--KW 447
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTCF 211
C + G +++VFP CP+++ S+ SSS C
Sbjct: 448 HCEFVSGFTDAVFPVSCPQMQ--SNVSSSWCL 477
>gi|388499792|gb|AFK37962.1| unknown [Lotus japonicus]
Length = 469
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 125/211 (59%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D +++KSGWDEYGI+YG PT + IRR+ S + + +A GSEM
Sbjct: 236 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRRLTCISPTSAVIALGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I +S +G+ +T GRGGY++ I + + + F G+ GSH
Sbjct: 296 SGGIEDVRAEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTMKTMKWVFWMTGDYGSHA 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D+++DP+A+P I+ I ++D++ N+T+A GI APF IC+SN+++ L W
Sbjct: 356 DNNYDPNAIPVIENINYRDMVAENVTMAARLEGISGAPFTGICISNVTIELAKKAKKVPW 415
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C+++ G S V PEPC L + C
Sbjct: 416 TCTDVSGISSGVTPEPCELLPGQAEEKFGAC 446
>gi|326488219|dbj|BAJ89948.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 126/209 (60%), Gaps = 2/209 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I+ G D I++KSGWDEYGIAYGRP++D+ IRR+ SS + + GSE
Sbjct: 241 SSSNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSDITIRRIT-GSSPFAGFSVGSET 299
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV E ++ Y S G+ +T GRGG+I+ I +SD L N+ G+ G HP
Sbjct: 300 SGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITVSDVILDNVRYGLRIAGDVGGHP 359
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ ++ +ALP +D + K++ G NI AG GI + F+ ICLSNI L W+
Sbjct: 360 DERYNHNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSAFSRICLSNIKLH-GSAPVRPWK 418
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSST 209
C + G + V P PC EL + S S T
Sbjct: 419 CQAVSGGALDVQPSPCTELTSMSGMSFCT 447
>gi|326496364|dbj|BAJ94644.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509249|dbj|BAJ91541.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510305|dbj|BAJ87369.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518514|dbj|BAJ88286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 126/209 (60%), Gaps = 2/209 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I+ G D I++KSGWDEYGIAYGRP++D+ IRR+ SS + + GSE
Sbjct: 241 SSSNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSDITIRRIT-GSSPFAGFSVGSET 299
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV E ++ Y S G+ +T GRGG+I+ I +SD L N+ G+ G HP
Sbjct: 300 SGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITVSDVILDNVRYGLRIAGDVGGHP 359
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ ++ +ALP +D + K++ G NI AG GI + F+ ICLSNI L W+
Sbjct: 360 DERYNHNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSAFSRICLSNIKLH-GSAPVRPWK 418
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSST 209
C + G + V P PC EL + S S T
Sbjct: 419 CQAVSGGALDVQPSPCTELTSMSGMSFCT 447
>gi|302809176|ref|XP_002986281.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
gi|300145817|gb|EFJ12490.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
Length = 445
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 128/194 (65%), Gaps = 2/194 (1%)
Query: 5 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGI 64
VCIEDC I G DA+S+KSGWDEYGI G P+ V IRR+ Q+ + +++AFGSEMSGGI
Sbjct: 233 VCIEDCAITSGGDAVSVKSGWDEYGIQVGLPSAKVVIRRITAQAPASAAIAFGSEMSGGI 292
Query: 65 SNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS-HPDDD 123
NV VE + +++S G+ +T GRGGY+K I +++ + ++ A GN S HPD+
Sbjct: 293 KNVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTMDSVLTAIALSGNSSSEHPDEG 352
Query: 124 FDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-WECS 182
+DP A P + I + G NI+ AG+ G++ APF +ICLSNI+L ++ S S W+CS
Sbjct: 353 YDPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDICLSNITLEVDEASQGSKWDCS 412
Query: 183 NIHGSSESVFPEPC 196
N+ G+S V P PC
Sbjct: 413 NVKGASLGVTPTPC 426
>gi|224064057|ref|XP_002301370.1| predicted protein [Populus trichocarpa]
gi|222843096|gb|EEE80643.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 124/211 (58%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D +++KSGWDEYGIA+G PT + IRR+ S +++A GSEM
Sbjct: 236 SCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQLVIRRLTCISPYSATIALGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I + +G+ +T GRGGY+K I + ++ + F GN GSH
Sbjct: 296 SGGIEDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGSHA 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SW 179
D ++DP+ALP I I ++D++ N+T+A GI PF IC+SN+++ + P + W
Sbjct: 356 DKNYDPNALPLIQGINYRDMVADNVTMAARLEGIAGDPFKEICISNVTIGLAPKAKKVPW 415
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C+ I G + V P PC L + ++C
Sbjct: 416 TCTEIEGMTSGVSPRPCDLLPDQGPEKITSC 446
>gi|293332875|ref|NP_001170283.1| uncharacterized protein LOC100384246 precursor [Zea mays]
gi|224028521|gb|ACN33336.1| unknown [Zea mays]
gi|413925951|gb|AFW65883.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 451
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 126/210 (60%), Gaps = 2/210 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D +++KSGWDEYGIAYGRP+ V +RRV SS S +A GSE
Sbjct: 243 SSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVRRVR-GSSPFSGIAIGSEA 301
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ +V VE ++DS GI +T GRGGYI+ + + L + G+ G HP
Sbjct: 302 SGGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVRLTGVRSGVRIAGDVGDHP 361
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D F A+P +D + ++ G N+ G+ GI+ +PF ICLSN+ L S +W+
Sbjct: 362 DAHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRICLSNVKLF-GWRSDAAWK 420
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C ++ G++ V P PC EL S +++ S+C
Sbjct: 421 CRDVRGAALGVQPSPCAELATSFASARSSC 450
>gi|356554060|ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 446
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 129/211 (61%), Gaps = 5/211 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D +++KSGWDEYGIAYGRP++D+ IRR+ SS + +A GSE
Sbjct: 236 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDITIRRIT-GSSPFAGIAIGSET 294
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV E I+LY+ GI +T GRGG+IK I +S + G+ G HP
Sbjct: 295 SGGVENVLAEHINLYNMGIGIHIKTNTGRGGFIKNITMSHVYMEEARKGIRISGDVGDHP 354
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SW 179
DD FD +ALP + +T K++ G + AG G++ +PF +ICL +I+L G W
Sbjct: 355 DDKFDANALPLVKGVTIKNVWGMKVLQAGLIQGLRNSPFTDICLYDINLHGVTGPRTPPW 414
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
+CS++ G + V P PC EL SSN +C
Sbjct: 415 KCSDVSGFAHQVSPWPCSEL---SSNQQGSC 442
>gi|388512935|gb|AFK44529.1| unknown [Lotus japonicus]
Length = 469
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 125/211 (59%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D +++KSGWDEYGI+YG PT + IRR+ S + + +A GSEM
Sbjct: 236 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRRLTCISPTSAVIALGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I +S +G+ +T GRGGY++ I + + + F G+ GSH
Sbjct: 296 SGGIEDVRAEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTMKTMKWVFWMTGDYGSHA 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D+++DP+A+P I+ I ++D++ N+T+A GI APF IC+SN+++ L W
Sbjct: 356 DNNYDPNAIPVIENINYRDMVAENVTMAARLGGISGAPFTGICISNVTIELAKKAKKVPW 415
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C+++ G S V PEPC L + C
Sbjct: 416 TCTDVSGISSGVTPEPCELLPGQAEEKFGAC 446
>gi|302814173|ref|XP_002988771.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
gi|300143592|gb|EFJ10282.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
Length = 445
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 128/194 (65%), Gaps = 2/194 (1%)
Query: 5 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGI 64
VCIEDC I G DA+S+KSGWDEYGI G P+ V IRR+ Q+ + +++AFGSEMSGGI
Sbjct: 233 VCIEDCAITSGGDAVSVKSGWDEYGIRVGLPSAKVVIRRITAQAPASAAIAFGSEMSGGI 292
Query: 65 SNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS-HPDDD 123
NV VE + +++S G+ +T GRGGY+K I +++ + ++ A GN S HPD+
Sbjct: 293 KNVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTMDSVLTAIALSGNSSSEHPDEG 352
Query: 124 FDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-WECS 182
+DP A P + I + G NI+ AG+ G++ APF +ICLSNI+L ++ S S W+CS
Sbjct: 353 YDPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDICLSNITLEVDDASQGSKWDCS 412
Query: 183 NIHGSSESVFPEPC 196
N+ G+S V P PC
Sbjct: 413 NVKGASLGVTPTPC 426
>gi|224034791|gb|ACN36471.1| unknown [Zea mays]
Length = 347
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 126/210 (60%), Gaps = 2/210 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D +++KSGWDEYGIAYGRP+ V +RRV SS S +A GSE
Sbjct: 139 SSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVRRVR-GSSPFSGIAIGSEA 197
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ +V VE ++DS GI +T GRGGYI+ + + L + G+ G HP
Sbjct: 198 SGGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVRLTGVRSGVRIAGDVGDHP 257
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D F A+P +D + ++ G N+ G+ GI+ +PF ICLSN+ L S +W+
Sbjct: 258 DAHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRICLSNVKLF-GWRSDAAWK 316
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C ++ G++ V P PC EL S +++ S+C
Sbjct: 317 CRDVRGAALGVQPSPCAELATSFASARSSC 346
>gi|15229058|ref|NP_190464.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|6522571|emb|CAB62015.1| endo-polygalacturonase-like protein [Arabidopsis thaliana]
gi|67633678|gb|AAY78763.1| glycoside hydrolase family 28 protein [Arabidopsis thaliana]
gi|332644955|gb|AEE78476.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 469
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 122/209 (58%), Gaps = 4/209 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D I++KSGWD+YGI +G PT + IRR+ S + VA GSEM
Sbjct: 239 SCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEM 298
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V++E + L ++ + I +T GRG Y+K I + + F GN GSHP
Sbjct: 299 SGGIKDVRIEDVTLTNTESAIRIKTAVGRGAYVKDIYARRITMKTMKYVFWMSGNYGSHP 358
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D+ FDP ALP I I ++D+ N+T++ + GI + PF IC+SN+++ L W
Sbjct: 359 DEGFDPKALPEITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVTIALAAKAKKMQW 418
Query: 180 ECSNIHGSSESVFPEPC---PELENSSSN 205
C+++ G + V PEPC PE + + N
Sbjct: 419 NCTDVAGVTSRVTPEPCSLLPEKKAQAKN 447
>gi|357507519|ref|XP_003624048.1| Polygalacturonase [Medicago truncatula]
gi|355499063|gb|AES80266.1| Polygalacturonase [Medicago truncatula]
Length = 483
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 121/211 (57%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D +++KSGWDEYGI +G PT + IRR+ S +++A GSEM
Sbjct: 248 SCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPFSATIALGSEM 307
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I + +G+ +T GRGGY+K I + ++ + AF G+ SH
Sbjct: 308 SGGIQDVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTMHTMKWAFKMTGDYNSHA 367
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D FDP+ALP I I ++D++ N+TIA F GI PF IC++N++L + SW
Sbjct: 368 DTHFDPNALPEIANINYRDVVAENVTIAARFQGISNDPFKGICIANVTLGMAVKAKKRSW 427
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C++I G + V P PC L + C
Sbjct: 428 TCTDIEGMTSGVTPPPCDLLPDQGPEKIGAC 458
>gi|125538851|gb|EAY85246.1| hypothetical protein OsI_06620 [Oryza sativa Indica Group]
Length = 443
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 131/207 (63%), Gaps = 6/207 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D +++KSGWDEYGIAYGRP++ + IRRV SS S +A GSE
Sbjct: 236 SSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRRVR-GSSPFSGIAIGSEA 294
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S+V VE +++S GI +T GRGG+I+ I + + + ++ G+ G HP
Sbjct: 295 SGGVSDVLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDNVRMNSVRNGLRIAGDVGDHP 354
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN--S 178
D+ F ALP +D ++ K++ G N+ G+ GI+ +PF ICL+N+ L G N +
Sbjct: 355 DEHFSQLALPTVDGVSIKNVWGVNVQQPGSIEGIRNSPFTRICLANVKLF---GWRNNAA 411
Query: 179 WECSNIHGSSESVFPEPCPELENSSSN 205
W+C ++HG++ V P PC EL S S+
Sbjct: 412 WKCRDVHGAALGVQPGPCAELTTSLSS 438
>gi|359489656|ref|XP_003633958.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 479
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 121/211 (57%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D +++KSGWDEYGIAYG PT + IRR+ S + +A GSEM
Sbjct: 244 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSEM 303
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I +S +GI +T GRGGY+K I + + + AF GN GSH
Sbjct: 304 SGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSHA 363
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D+ +DP A P I I ++D++ N+++A GI PF IC+SN+++ L W
Sbjct: 364 DNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPW 423
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C+++ G S V P PC L + +S C
Sbjct: 424 TCTDVEGISSGVTPTPCSTLPDQGPEKTSLC 454
>gi|449530307|ref|XP_004172137.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 126/211 (59%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IEDC I G D +++KSGWDEYGI++G PT + +RR+ S + + +A GSEM
Sbjct: 259 SCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVRRLTCISPTSAVIALGSEM 318
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I DS +G+ +T GRGGY+K I + ++ + AF G+ GSH
Sbjct: 319 SGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKDIYVRRMTMHTMKWAFWMTGDYGSHA 378
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-W 179
D ++DP ALP I I +KD++ N T+A GI F +IC+SN+++ + P + W
Sbjct: 379 DKNYDPHALPVIQGINYKDMVVENATMAARLEGISGDTFTDICISNVTIGLAPKAKKQPW 438
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C++I G + V P PC L + +TC
Sbjct: 439 TCTDIEGITSQVTPPPCDLLPDQGEEKITTC 469
>gi|449432134|ref|XP_004133855.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 126/211 (59%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IEDC I G D +++KSGWDEYGI++G PT + +RR+ S + + +A GSEM
Sbjct: 259 SCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVRRLTCISPTSAVIALGSEM 318
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I DS +G+ +T GRGGY+K I + ++ + AF G+ GSH
Sbjct: 319 SGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKDIYVRRMTMHTMKWAFWMTGDYGSHA 378
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-W 179
D ++DP ALP I I +KD++ N T+A GI F +IC+SN+++ + P + W
Sbjct: 379 DKNYDPHALPVIQGINYKDMVVENATMAARLEGISGDTFTDICISNVTIGLAPKAKKQPW 438
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C++I G + V P PC L + +TC
Sbjct: 439 TCTDIEGITSQVTPPPCDLLPDQGEEKITTC 469
>gi|226504332|ref|NP_001141464.1| uncharacterized protein LOC100273574 precursor [Zea mays]
gi|194704686|gb|ACF86427.1| unknown [Zea mays]
gi|223949711|gb|ACN28939.1| unknown [Zea mays]
gi|413950643|gb|AFW83292.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
gi|413950644|gb|AFW83293.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
Length = 446
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 126/206 (61%), Gaps = 2/206 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+CIEDC I+ G D+I++KSGWDEYGIAYGR ++ + +RR+ SS + A GSE
Sbjct: 237 SSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRASSGITVRRIT-GSSPFAGFAVGSET 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV E ++ ++S GI +T GRGG+I+ I +SD L N+ G+ G+HP
Sbjct: 296 SGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLRIVGDVGNHP 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD ++ ALP +D +T K++ G N+ AG GI + F+ ICLSN+ W+
Sbjct: 356 DDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVK-FTGGAPVRPWK 414
Query: 181 CSNIHGSSESVFPEPCPELENSSSNS 206
C + G + V P PC EL ++S S
Sbjct: 415 CEAVSGGALDVQPSPCTELTSTSGTS 440
>gi|223635599|sp|A7PZL3.1|PGLR_VITVI RecName: Full=Probable polygalacturonase; Short=PG; AltName:
Full=Pectinase
Length = 491
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 121/211 (57%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D +++KSGWDEYGIAYG PT + IRR+ S + +A GSEM
Sbjct: 256 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSEM 315
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I +S +GI +T GRGGY+K I + + + AF GN GSH
Sbjct: 316 SGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSHA 375
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D+ +DP A P I I ++D++ N+++A GI PF IC+SN+++ L W
Sbjct: 376 DNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPW 435
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C+++ G S V P PC L + +S C
Sbjct: 436 TCTDVEGISSGVTPTPCSTLPDQGPEKTSLC 466
>gi|147776708|emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]
Length = 479
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 129/205 (62%), Gaps = 3/205 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I G D +++KSGWD+YGIA RP++++ +RR+ + + S V GSEM
Sbjct: 259 SSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRRLSGTTPTCSGVGIGSEM 318
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV +E +H++DS G+ +T KGRGGY+ I I++ + + V HP
Sbjct: 319 SGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIRMERVKVPIRFSRGSNDHP 378
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLL-INPGSYNSW 179
DD +DP A+P I I +++ N T A GI+ AP+ IC+ N++LL + P + W
Sbjct: 379 DDXWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGICMKNVTLLGLAPAA--KW 436
Query: 180 ECSNIHGSSESVFPEPCPELENSSS 204
C + G +++VFP CP+++++ +
Sbjct: 437 HCEFVSGFTDAVFPVSCPQMQSNEA 461
>gi|242091535|ref|XP_002441600.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
gi|241946885|gb|EES20030.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
Length = 439
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 125/203 (61%), Gaps = 2/203 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D IS+KSGWDEYGIA+GRP++ + IRR+ S + A GSE
Sbjct: 232 SSSNVCIEDSYISAGDDLISIKSGWDEYGIAFGRPSSGITIRRIT-GSGPFAGFAVGSET 290
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV VE ++L+ GI +T GRGG+I+ I +S+ L G+ G HP
Sbjct: 291 SGGVENVLVEHLNLFGMGVGIHIKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHP 350
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D ++P LP ++ +T K+++G NI AG GI+ + F+NICLSN+ L S W+
Sbjct: 351 DASYNPSVLPVVNSVTIKNVLGQNIRQAGLIRGIRNSVFSNICLSNVKLY-GSASIGPWK 409
Query: 181 CSNIHGSSESVFPEPCPELENSS 203
C + G++ V P PC EL ++S
Sbjct: 410 CRAVSGAALDVQPSPCTELASTS 432
>gi|356560736|ref|XP_003548644.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 479
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 121/211 (57%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D +++KSGWDEYGI +G PT + IRR+ S +++A GSEM
Sbjct: 248 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPESAAIALGSEM 307
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I + +G+ +T GRGGY+K I + ++ + F GN GSH
Sbjct: 308 SGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGSHA 367
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D +DP+ALP I+ I ++D++ N+TIA GI PF IC++N+++ + W
Sbjct: 368 DSHYDPNALPEINGINYRDVVADNVTIAARLEGISNDPFTGICIANVTINMAAKAKKQPW 427
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C++I G + V P+PC L + C
Sbjct: 428 ACTDIEGITSGVTPKPCNSLPDQGPEKIKAC 458
>gi|359490609|ref|XP_002273177.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 465
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 117/205 (57%), Gaps = 1/205 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IEDC I G D I++KSGWD+YGI +G PT D+ IRR+ S + +A GSEM
Sbjct: 238 SSKNVLIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLIIRRLTCISPDSAVIALGSEM 297
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI NV+ E I DS +G+ ++ GRGGY+K I + + F G+ G HP
Sbjct: 298 SGGIKNVRAENITAIDSESGVRIKSGVGRGGYVKDIYARGMTMKTMKYVFWMTGDYGQHP 357
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
DD +DP ALP I+ I ++D++ N+T + GI PF IC+SN+ + L W
Sbjct: 358 DDGWDPKALPKIENINYRDMVAENVTYSARLDGISGDPFTGICISNVKIGLTEKPKKLQW 417
Query: 180 ECSNIHGSSESVFPEPCPELENSSS 204
C+N+ G S V P C L S
Sbjct: 418 NCTNVEGVSSQVTPPSCDLLHPSKK 442
>gi|109509136|gb|ABG34277.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 242
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 124/211 (58%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IEDC I G D +++KSGWDEYGIA+G PT + IRR+ S +++A GSEM
Sbjct: 8 SCTNVRIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTQQLIIRRLTCISPYSATIALGSEM 67
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I ++ +GI +T GRG YIK I + ++ + AF G+ SHP
Sbjct: 68 SGGIRDVRAEDIVAINTESGIRIKTAVGRGAYIKDIYVKKMTMHTMKWAFKMDGDYKSHP 127
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D+ +DP+ALP I I ++D++ N+++A F GI F IC++N++L + W
Sbjct: 128 DNKYDPNALPVIQNINYRDMVAENVSVAARFNGIAGDKFTGICMANVTLGMTAKHKKYPW 187
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C+++ G + V P PC L + S C
Sbjct: 188 TCTDVQGMTSGVTPPPCDSLPDQGPEKISAC 218
>gi|109509132|gb|ABG34275.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 238
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 122/206 (59%), Gaps = 1/206 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IED I G D +++KSGWDEYGI+YG PT + IRR+ S + +A GSEM
Sbjct: 8 SCTNTRIEDVHIVSGDDCVAVKSGWDEYGISYGMPTKQLVIRRLTCISPYSAMIALGSEM 67
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I ++ +GI +T GRGGY+K I + +++ + AF GN GSHP
Sbjct: 68 SGGIEDVRAEDITAINTESGIRIKTAMGRGGYVKDIYVRGMKMHTMKWAFWMDGNYGSHP 127
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-W 179
D +DP A P I I ++DI+ N+T+ GI PF IC+SN ++ + P S W
Sbjct: 128 DPHYDPKARPIITGINYRDIVAENVTMVAQLKGIPGNPFTGICISNATITMAPESKKEPW 187
Query: 180 ECSNIHGSSESVFPEPCPELENSSSN 205
CS+IHG + V P+PC L ++
Sbjct: 188 TCSDIHGITSGVTPQPCGMLPAETTT 213
>gi|356524183|ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 474
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 128/208 (61%), Gaps = 4/208 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D +++KSGWDEYGIAYGRP+ + IRR L SS + +A GSE
Sbjct: 266 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSYGITIRR-LTGSSPFAGIAIGSET 324
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV E I+L++ GI +T GRGG IK I ++ + N G+ G HP
Sbjct: 325 SGGVENVLAEHINLFNMGVGIHIKTNSGRGGLIKNITVAHVYVENARQGIKIAGDVGGHP 384
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL--LINPGSYNS 178
D+ F+P+ALP + IT K++ G + AG G++ +PF ++CLSNI+ + P S S
Sbjct: 385 DEKFNPNALPVVKGITIKNVWGVRVNQAGLIHGLRNSPFTDVCLSNINFHGMRGPRS-PS 443
Query: 179 WECSNIHGSSESVFPEPCPELENSSSNS 206
W+CS++ G + V P PC +L + S
Sbjct: 444 WKCSDVFGFAHQVSPWPCSQLSSQEPGS 471
>gi|388509890|gb|AFK43011.1| unknown [Medicago truncatula]
Length = 483
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 121/211 (57%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D +++KSGWDEYGI +G PT + IRR+ S +++A GSEM
Sbjct: 248 SCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPFSATIALGSEM 307
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I + +G+ +T GRGGY+K I + ++ + AF G+ SH
Sbjct: 308 SGGIQDVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTMHTMKWAFKMTGDYNSHA 367
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D FDP+ALP I I ++D++ N+TIA F GI PF IC++N++L + SW
Sbjct: 368 DTHFDPNALPEIANINYRDVVAENVTIAARFQGIFNDPFKGICIANVTLGMAVKAKKRSW 427
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C++I G + V P PC L + C
Sbjct: 428 TCTDIEGMTSGVTPPPCDLLPDQGPEKIGAC 458
>gi|242061204|ref|XP_002451891.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
gi|241931722|gb|EES04867.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
Length = 448
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D +++KSGWDEYGIAYGRP++ + IRRV SS S +A GSE
Sbjct: 238 SSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRRV-RGSSPFSGIAIGSEA 296
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVA-FGACGNCGSH 119
SGG+ +V VE ++DS GI +T GRGGYI+ + + + + + ++ G+ G H
Sbjct: 297 SGGVRDVLVEDCSIFDSGYGIHIKTNVGRGGYIRNVTVDNVRMSGVRISGVRIAGDVGDH 356
Query: 120 PDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSW 179
PD F A+P +D + ++ G N+ G+ GI+ +PF ICLSN+ L + +W
Sbjct: 357 PDAHFSQLAVPLVDAVRISNVWGVNVQHPGSLEGIRSSPFTRICLSNVKLFGWRKNDAAW 416
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C ++ G++ V P PC EL S +++ S+C
Sbjct: 417 RCRDVRGAALGVQPSPCAELATSFASAGSSC 447
>gi|297816104|ref|XP_002875935.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321773|gb|EFH52194.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 122/209 (58%), Gaps = 4/209 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D I++KSGWD+YGI +G PT + IRR+ S + VA GSEM
Sbjct: 239 SCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEM 298
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V++E + L ++ + I +T GRG Y+K I + + F GN SHP
Sbjct: 299 SGGIKDVRIEDVTLTNTESAIRIKTAAGRGAYVKDIFARRITMKTMKYVFWMSGNYNSHP 358
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D+ FDP ALP + I ++D+ N+T++ + GI + PF IC+SN+++ L + W
Sbjct: 359 DEGFDPKALPEVTNINYRDMTAENVTMSASLDGIHKDPFTGICISNVTIALADKAKKVQW 418
Query: 180 ECSNIHGSSESVFPEPC---PELENSSSN 205
C+++ G + V PEPC PE + + N
Sbjct: 419 NCTDVAGVTSRVTPEPCSLLPEKKAPAKN 447
>gi|449497436|ref|XP_004160401.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Cucumis sativus]
Length = 480
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 117/203 (57%), Gaps = 1/203 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D I++KSGWD+YGI +G PT D+ I+R+ S + VA GSEM
Sbjct: 247 SCSNTRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSEM 306
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI NV++E ++ + + +T +GRGG++K I + L + F GN SHP
Sbjct: 307 SGGIRNVRIENFTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHP 366
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
DD FDP ALP I I ++D++ N+T + GI PF NIC+SN+ + L W
Sbjct: 367 DDKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTATPKKLQW 426
Query: 180 ECSNIHGSSESVFPEPCPELENS 202
C+++ G S V P PC L +
Sbjct: 427 NCTDVEGFSSDVVPPPCAPLAKA 449
>gi|449456478|ref|XP_004145976.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 480
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 117/203 (57%), Gaps = 1/203 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D I++KSGWD+YGI +G PT D+ I+R+ S + VA GSEM
Sbjct: 247 SCSNTRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSEM 306
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI NV++E ++ + + +T +GRGG++K I + L + F GN SHP
Sbjct: 307 SGGIRNVRIENFTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHP 366
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
DD FDP ALP I I ++D++ N+T + GI PF NIC+SN+ + L W
Sbjct: 367 DDKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTATPKKLQW 426
Query: 180 ECSNIHGSSESVFPEPCPELENS 202
C+++ G S V P PC L +
Sbjct: 427 NCTDVEGFSSDVVPPPCAPLAKA 449
>gi|55295844|dbj|BAD67712.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|125553735|gb|EAY99340.1| hypothetical protein OsI_21311 [Oryza sativa Indica Group]
gi|125595774|gb|EAZ35554.1| hypothetical protein OsJ_19837 [Oryza sativa Japonica Group]
Length = 485
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 123/203 (60%), Gaps = 1/203 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V IEDC I G D +++KSGWDEYGIAYG P+ + +RR+ S + + +A GSEM
Sbjct: 253 SCSHVRIEDCYIVSGDDCVAIKSGWDEYGIAYGMPSQHIVVRRLTCVSPTSAVIALGSEM 312
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS+V+ E I +S + + +T GRG Y++ + + L + F GN SHP
Sbjct: 313 SGGISDVRAEDITAVNSESAVRIKTAVGRGAYVRDVFVRGMSLDTMKWVFWMTGNYKSHP 372
Query: 121 DDDFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISLLINPGSYNSW 179
DD +DP+A+P +D I+++D++ T + A GIQ APF IC++N++ ++ W
Sbjct: 373 DDGYDPNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFRGICIANVTATLSKSRKYPW 432
Query: 180 ECSNIHGSSESVFPEPCPELENS 202
C++I G S V P PC L+ +
Sbjct: 433 TCTDIEGVSTGVTPAPCQPLQGA 455
>gi|356520375|ref|XP_003528838.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 482
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 120/211 (56%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D +++KSGWDEYGI +G PT + IRR+ S +++A GSEM
Sbjct: 248 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPQSAAIALGSEM 307
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I + +G+ +T GRGGY+K I + ++ + F GN GSH
Sbjct: 308 SGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGSHA 367
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D +DP ALP I+ I ++D++ N+T+A GI PF IC++N+++ + W
Sbjct: 368 DSHYDPKALPEINGINYRDVVADNVTMAARLEGISNDPFTGICIANVTIGMAAKAKKQPW 427
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C++I G + V P+PC L + C
Sbjct: 428 TCTDIEGITSGVTPKPCNSLPDQGPEKIKAC 458
>gi|125553514|gb|EAY99223.1| hypothetical protein OsI_21181 [Oryza sativa Indica Group]
Length = 448
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 123/206 (59%), Gaps = 2/206 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D IS+KSGWDEYGIA+GRP++ + IRR+ S + A GSE
Sbjct: 241 SSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRIT-GSGPFAGFAVGSET 299
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV VE ++ + GI +T GRGG+I+ I +S+ L G+ G HP
Sbjct: 300 SGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHP 359
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D +DP LP +D +T K++ G NI AG GI+++ F+ ICLSN+ L S W+
Sbjct: 360 DASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLSNVKLY-GGDSVGPWK 418
Query: 181 CSNIHGSSESVFPEPCPELENSSSNS 206
C + G + V P PC EL ++S S
Sbjct: 419 CRAVSGGALDVQPSPCAELTSTSEMS 444
>gi|115465733|ref|NP_001056466.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|113580017|dbj|BAF18380.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|125568884|gb|EAZ10399.1| hypothetical protein OsJ_00232 [Oryza sativa Japonica Group]
Length = 448
Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 123/206 (59%), Gaps = 2/206 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D IS+KSGWDEYGIA+GRP++ + IRR+ S + A GSE
Sbjct: 241 SSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRIT-GSGPFAGFAVGSET 299
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV VE ++ + GI +T GRGG+I+ I +S+ L G+ G HP
Sbjct: 300 SGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHP 359
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D +DP LP +D +T K++ G NI AG GI+++ F+ ICLSN+ L S W+
Sbjct: 360 DASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLSNVKLY-GGDSVGPWK 418
Query: 181 CSNIHGSSESVFPEPCPELENSSSNS 206
C + G + V P PC EL ++S S
Sbjct: 419 CRAVSGGALDVQPSPCAELTSTSEMS 444
>gi|242094380|ref|XP_002437680.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
gi|241915903|gb|EER89047.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
Length = 495
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 124/203 (61%), Gaps = 1/203 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V IEDC I G D +++KSGWDEYGI+YG P+ + IRR+ S + + +A GSEM
Sbjct: 256 SCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEM 315
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I +S +G+ +T GRG Y+K + + L + F GN SHP
Sbjct: 316 SGGIQDVRAEDITAINSESGVRIKTAVGRGAYVKDVFVRRMTLTTMKWVFWMTGNYKSHP 375
Query: 121 DDDFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISLLINPGSYNSW 179
DD +DP+A+P +D I+++D++ T + A GIQ APF IC++N++ ++ W
Sbjct: 376 DDKYDPNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFKGICVANVTADLSKSRKYPW 435
Query: 180 ECSNIHGSSESVFPEPCPELENS 202
C+++ G S +V P PC L+ +
Sbjct: 436 TCADVEGVSVNVSPAPCQPLQGA 458
>gi|48475087|gb|AAT44156.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 474
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 124/209 (59%), Gaps = 2/209 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D IS+KSGWDEYGIA+GRP++ + IRR+ S + A GSE
Sbjct: 267 SSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRIT-GSGPFAGFAVGSET 325
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV VE ++ + GI +T GRGG+I+ I +S+ L G+ G HP
Sbjct: 326 SGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHP 385
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D +DP LP +D +T K++ G NI AG GI+++ F+ ICLSN+ L S W+
Sbjct: 386 DASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLSNVKLY-GGDSVGPWK 444
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSST 209
C + G + V P PC EL ++S S T
Sbjct: 445 CRAVSGGALDVQPSPCAELTSTSEMSFCT 473
>gi|356567484|ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 442
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 127/207 (61%), Gaps = 2/207 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D +++KSGWDEYGIAYGRP+ + IRRV SS + +A GSE
Sbjct: 234 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSYGITIRRVT-GSSPFAGIAIGSET 292
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV E I+L++ GI +T GRGG IK I ++ + N G+ G HP
Sbjct: 293 SGGVENVLAEHINLFNMGVGIHIKTNSGRGGLIKNITVAHVYVENARQGIKIAGDVGGHP 352
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SW 179
D+ F+P+ALP + IT K++ G + AG G++ +PF ++CLS+I+ G + SW
Sbjct: 353 DEKFNPNALPVVKGITIKNVWGVKVNQAGLIHGLRNSPFTDVCLSDINFHGMEGPRSPSW 412
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNS 206
+CS++ G + V P PC +L + S
Sbjct: 413 KCSDVFGFAHQVSPWPCSQLSSQEPGS 439
>gi|302767960|ref|XP_002967400.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
gi|300165391|gb|EFJ31999.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
Length = 426
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 124/200 (62%), Gaps = 3/200 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCI D I+ G DA+++KSGWDEYG+A+ RP+ DV + + + S G ++ GSEM
Sbjct: 223 SSSNVCIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDVFLVNLTVSGSHG--ISLGSEM 280
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI NV + + ++ GI +T+ GRG YI+ + E+ + VAF G G HP
Sbjct: 281 SGGIYNVHAYGVSISGAVQGIHIKTSAGRGAYIRNASFASFEILDTGVAFSFTGIYGDHP 340
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D ++ A I+ I+F+D++G + AG+F G+ ++PF + C ++++L +N G N W
Sbjct: 341 DAGYNASAFATIENISFRDVVGMRVNRAGDFRGVPQSPFRHTCFTDVALELN-GKSNHWN 399
Query: 181 CSNIHGSSESVFPEPCPELE 200
CS I G S V P PCPEL+
Sbjct: 400 CSYIEGYSRHVSPPPCPELQ 419
>gi|302753776|ref|XP_002960312.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
gi|300171251|gb|EFJ37851.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
Length = 455
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 124/200 (62%), Gaps = 3/200 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCI D I+ G DA+++KSGWDEYG+A+ RP+ DV + + + S G ++ GSEM
Sbjct: 252 SSSNVCIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDVFLVNLTVSGSHG--ISLGSEM 309
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI NV + + ++ GI +T+ GRG YI+ + E+ + VAF G G HP
Sbjct: 310 SGGIYNVHAYGVSISGAVQGIHIKTSAGRGAYIRNASFASFEILDTGVAFSFTGIYGDHP 369
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D ++ A I+ I+F+D++G + AG+F G+ ++PF + C ++++L +N G N W
Sbjct: 370 DAGYNASAFATIENISFRDVVGMRVNRAGDFRGVPQSPFRHTCFTDVALELN-GKSNHWN 428
Query: 181 CSNIHGSSESVFPEPCPELE 200
CS I G S V P PCPEL+
Sbjct: 429 CSYIEGYSRHVSPPPCPELQ 448
>gi|357504351|ref|XP_003622464.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355497479|gb|AES78682.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 479
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 122/211 (57%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D +++KSGWDEYGI +G PT + IRR+ S +++A GSEM
Sbjct: 248 SCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPYSATIALGSEM 307
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I + +GI +T GRGGY+K I + ++ + AF GN GSH
Sbjct: 308 SGGIQDVRAEDITAVHTESGIRIKTAVGRGGYVKDIYVKKMTMHTMKWAFWITGNYGSHA 367
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D +++ ALP I I ++D++ N+++AGN GI PF IC+SN+++ + W
Sbjct: 368 DKNYNHSALPEIKNIHYRDMVADNVSMAGNLEGISNDPFTGICISNVTITMAAKAKKQPW 427
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C++I G + V P+PC L + C
Sbjct: 428 TCNDIEGITSGVTPKPCDLLPEQGKENIRDC 458
>gi|30692538|gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa]
Length = 474
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 122/211 (57%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D +++KSGWDEYGI++G PT + IRR+ S +++A GSEM
Sbjct: 241 SCTNTKIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPYSATIALGSEM 300
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I ++ + + +T GRG Y+K I + L+ + AF GN GSH
Sbjct: 301 SGGIQDVRAEDIVAINTESAVRIKTAVGRGAYVKDIYVRRMTLHTMKWAFWMTGNYGSHA 360
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D ++D +A P I I ++D++ N+T+A GI + PF IC+SN+++ L W
Sbjct: 361 DGNYDKNAFPEITGINYRDVVAENVTMAARLEGIADHPFTGICMSNVTIGLAKKAKKQPW 420
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C++I G + V P PC L + ++ C
Sbjct: 421 TCTDIQGITSGVTPTPCGLLPDQGTDKPGGC 451
>gi|255545184|ref|XP_002513653.1| polygalacturonase, putative [Ricinus communis]
gi|223547561|gb|EEF49056.1| polygalacturonase, putative [Ricinus communis]
Length = 473
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 119/201 (59%), Gaps = 3/201 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D I++KSGWD+YGI +G PT + IRR+ S +++A GSEM
Sbjct: 246 SCTNTRIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTKKLVIRRLTCISPDSATIALGSEM 305
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I ++ +GI +T GRG Y+K I + + F G+ GSHP
Sbjct: 306 SGGIQDVRAEDITAINTQSGIRIKTAAGRGAYVKDIFVRRMNFKTMKYVFWMTGSYGSHP 365
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLS--NISLLINPGSYNS 178
D +DP+ALP I +I ++DI+ N+T + GI++ PF IC+S NI+L P
Sbjct: 366 DKGYDPNALPIITRINYRDIVAENVTYSARLEGIEKDPFTGICISNANITLTKKPEKLQ- 424
Query: 179 WECSNIHGSSESVFPEPCPEL 199
W C++I G + +V P PC L
Sbjct: 425 WNCTDIEGVTSNVNPRPCSLL 445
>gi|225464581|ref|XP_002273669.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 478
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 116/203 (57%), Gaps = 1/203 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S V IEDC I G D I++KSGWD+YG +G PT D+ IRR+ S +++A GSEM
Sbjct: 245 SCKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISPDSATIALGSEM 304
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI NV E I D+ +GI +T GRGGY+K I + + + F G+ GSHP
Sbjct: 305 SGGIKNVWAEDITAIDTQSGIRIKTGIGRGGYVKDIYVRRMTVKTMKYVFWITGDYGSHP 364
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
DD +DP ALP I I ++D++ N+T + GI PF IC+SN+++ L W
Sbjct: 365 DDGWDPKALPVIKNINYRDMVAENVTYSARLDGISGDPFTGICISNVTIGLTEKPKELQW 424
Query: 180 ECSNIHGSSESVFPEPCPELENS 202
C+N+ G + V P C L S
Sbjct: 425 NCTNVAGVTSQVTPRSCDLLPPS 447
>gi|186701252|gb|ACC91278.1| glycoside hydrolase family 28 protein [Capsella rubella]
Length = 494
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D I++KSGWD+YGIAYG PT + IRR+ S + +A GSEM
Sbjct: 260 SCTNTRIEDCYIVSGDDCIAVKSGWDQYGIAYGMPTKQLLIRRLTCISPDSAVIALGSEM 319
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I DS +GI +T GRGGY+K + + + + F G+ GSHP
Sbjct: 320 SGGIEDVRAEDIVAIDSESGIRIKTAIGRGGYVKDVYVRGMTMKTMKYVFWMTGSYGSHP 379
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-W 179
D+ +DP ALP I I ++D++ N+T+ GI F IC+SN+++ ++ W
Sbjct: 380 DEHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVTITLSKKPKKVLW 439
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C+++ G + V P PC L + C
Sbjct: 440 NCTDVSGYTSGVTPAPCQLLPEKQPGTVVPC 470
>gi|449532729|ref|XP_004173333.1| PREDICTED: probable polygalacturonase-like, partial [Cucumis
sativus]
Length = 332
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I G D +++KSGWD+YGI RP++++ IRRV + + S V GSEM
Sbjct: 123 SSTNVCIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIVIRRVSGTTPTCSGVGIGSEM 182
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISN+ +E ++++DS GI ++ +GRGGYI + I++ + + +A HP
Sbjct: 183 SGGISNITIEDLNVWDSAAGIRIKSDQGRGGYIANVSITNFVMNRVKMAIRFSRGSNDHP 242
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLL-INPGSYNSW 179
D+ FDP A+P + I +++ N T A GI + +C+ N+++L + P + W
Sbjct: 243 DEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYGIAGTSYDGVCMKNVTILGLTPSA--KW 300
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTCF 211
C+ + G S SVFP PCP+L+N++ +S + F
Sbjct: 301 HCAFVSGFSTSVFPTPCPQLQNTTFSSLCSSF 332
>gi|449459262|ref|XP_004147365.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 472
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I G D +++KSGWD+YGI RP++++ IRRV + + S V GSEM
Sbjct: 263 SSTNVCIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIVIRRVSGTTPTCSGVGIGSEM 322
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISN+ +E ++++DS GI ++ +GRGGYI + I++ + + +A HP
Sbjct: 323 SGGISNITIEDLNVWDSAAGIRIKSDQGRGGYIANVSITNFVMNRVKMAIRFSRGSNDHP 382
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLL-INPGSYNSW 179
D+ FDP A+P + I +++ N T A GI + +C+ N+++L + P + W
Sbjct: 383 DEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYGIAGTSYDGVCMKNVTILGLTPSA--KW 440
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTCF 211
C+ + G S SVFP PCP+L+N++ +S + F
Sbjct: 441 HCAFVSGFSTSVFPTPCPQLQNTTFSSLCSSF 472
>gi|357509171|ref|XP_003624874.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
gi|355499889|gb|AES81092.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
Length = 476
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 123/203 (60%), Gaps = 4/203 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IED I G D I++KSGWD+YGI +G+P+ + IRR+ S + +A GSEM
Sbjct: 243 SSTNVRIEDNYIVSGDDCIAIKSGWDQYGIKFGKPSKQIIIRRLTCISPDSAMIALGSEM 302
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-NVAFGACGNCGSH 119
SGGI NV+VE + ++ + + ++ GRGGY+K I + +L I F G+ G H
Sbjct: 303 SGGIENVRVEDVTAINTESAVRIKSAVGRGGYVKDIFVKGVKLNTILRYVFWLTGSYGDH 362
Query: 120 PDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS- 178
PD+ FDP ALP I I F+D+I N+T+AG GI PF IC+SN+++ ++
Sbjct: 363 PDNGFDPKALPKITGIIFRDVIAKNVTVAGQLEGISNDPFTGICISNVTIELSELKKKKK 422
Query: 179 --WECSNIHGSSESVFPEPCPEL 199
W C+++ G + +V P+PC L
Sbjct: 423 LPWNCTDVSGVTSNVVPKPCDLL 445
>gi|357464681|ref|XP_003602622.1| Germin-like protein [Medicago truncatula]
gi|355491670|gb|AES72873.1| Germin-like protein [Medicago truncatula]
Length = 775
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 126/214 (58%), Gaps = 4/214 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I G D +++KSGWD+YGIA +P+T++ + RV + + S V GSEM
Sbjct: 269 SSTNVCIEDNYIESGDDLVAIKSGWDQYGIAVAKPSTNIIVSRVSGTTPTCSGVGIGSEM 328
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISN+ +E +H+++S G+ ++ GRGGYIK + IS+ + + + HP
Sbjct: 329 SGGISNITIENLHVWNSAAGVRIKSDNGRGGYIKNVSISNIRMERVKIPIRFSRGSNDHP 388
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +DP A+P I ++I N T A G++ + F +C NI+ L +W
Sbjct: 389 DDGWDPKAVPRFKDILISNVISVNSTKAPVLEGVKGSSFEGLCFKNITFL-GVALSATWH 447
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCFSLI 214
C + G + VFP PCPEL+N N +S+CF ++
Sbjct: 448 CEYVAGFTNGVFPLPCPELQN---NGTSSCFRVL 478
>gi|4490311|emb|CAB38802.1| putative protein [Arabidopsis thaliana]
gi|7270292|emb|CAB80061.1| putative protein [Arabidopsis thaliana]
Length = 462
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 119/199 (59%), Gaps = 1/199 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I G D +++KSGWD+YG+A RP++++ IRR+ + + S V GSEM
Sbjct: 252 SSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGTTRTCSGVGIGSEM 311
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI N+ VE IH++DS G+ +T KGRGGYI I ++ L + V H
Sbjct: 312 SGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPIRFSSGSNDHS 371
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +DP ALP + I +++ N A G++ F ++CL N++LL P + W+
Sbjct: 372 DDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTLLGLPKT-EKWK 430
Query: 181 CSNIHGSSESVFPEPCPEL 199
C ++ G + VFP CP+L
Sbjct: 431 CKDVSGYASDVFPLSCPQL 449
>gi|356534105|ref|XP_003535598.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 475
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 118/200 (59%), Gaps = 1/200 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D +++KSGWDEYGI +G+PT + IRR+ S + +A GSEM
Sbjct: 245 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIALGSEM 304
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+VE I ++ + + +T GRGGY+K I + L + F G+ GSHP
Sbjct: 305 SGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSYGSHP 364
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SW 179
D FDP ALP I I ++D++ TN+T + GI PF IC+SN+S+ ++ W
Sbjct: 365 DPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKKKLQW 424
Query: 180 ECSNIHGSSESVFPEPCPEL 199
C+++ G + +V P C L
Sbjct: 425 NCTDVAGVTSNVTPNTCQLL 444
>gi|356535839|ref|XP_003536450.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 118/200 (59%), Gaps = 1/200 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D +++KSGWDEYGI +G+PT + IRR+ S + +A GSEM
Sbjct: 246 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIALGSEM 305
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+VE I ++ + + +T GRGGY+K I + L + F G+ GSHP
Sbjct: 306 SGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSYGSHP 365
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SW 179
D FDP ALP I I ++D++ TN+T + GI PF IC+SN+S+ ++ W
Sbjct: 366 DPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKKKLQW 425
Query: 180 ECSNIHGSSESVFPEPCPEL 199
C+++ G + +V P C L
Sbjct: 426 NCTDVAGVTSNVTPNTCQLL 445
>gi|255541678|ref|XP_002511903.1| polygalacturonase, putative [Ricinus communis]
gi|223549083|gb|EEF50572.1| polygalacturonase, putative [Ricinus communis]
Length = 472
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 120/203 (59%), Gaps = 1/203 (0%)
Query: 9 DCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQ 68
DC I G D +++KSGWDEYGIA+G PT + IRR+ S +++A GSEMSGGI +V+
Sbjct: 246 DCYIISGDDCVAVKSGWDEYGIAFGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVR 305
Query: 69 VEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPDDDFDPDA 128
E I + +G+ +T GRGGY+K I + ++ + AF GN GSH D ++DP+A
Sbjct: 306 AEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWAFWMTGNYGSHADKNYDPNA 365
Query: 129 LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSWECSNIHGS 187
LP I+ I ++D++ N+++A GI PF IC+SN+++ + W C++I G
Sbjct: 366 LPVIEGINYRDMVADNVSMAARLEGISGDPFKQICISNVTIGMAAKAKKIPWTCTDIEGI 425
Query: 188 SESVFPEPCPELENSSSNSSSTC 210
+ V P PC L + + C
Sbjct: 426 TTGVSPRPCDLLPDQGPEKLTAC 448
>gi|357479389|ref|XP_003609980.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355511035|gb|AES92177.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 563
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 129/214 (60%), Gaps = 1/214 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IEDC I++G DAI++KSGWD+YGIAYGRP+ ++ IR ++++S + ++ GSEM
Sbjct: 339 SCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRSMVSAGISIGSEM 398
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV VE + ++DS G+ +T GRGGY++QI + N+ V + HP
Sbjct: 399 SGGISNVTVENLLVWDSRRGVRIKTAPGRGGYVRQITYRNITFENVRVGIVMKTDYNEHP 458
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +DP ALP I I+F ++ G + + G +E P N+ ++S+ + + ++
Sbjct: 459 DDGYDPTALPVIRDISFTNVYGHGVRVPVRIHGSEEIPVRNVTFRDMSVGLTYKKKHIFQ 518
Query: 181 CSNIHGSS-ESVFPEPCPELENSSSNSSSTCFSL 213
C+ +HG ++FP PC L+ + S+
Sbjct: 519 CAFVHGRVIGTIFPSPCENLDRYNEQGQLVKHSM 552
>gi|15236514|ref|NP_194081.1| putative polygalacturonase [Arabidopsis thaliana]
gi|3451075|emb|CAA20471.1| putative protein [Arabidopsis thaliana]
gi|7269198|emb|CAB79305.1| putative protein [Arabidopsis thaliana]
gi|23296346|gb|AAN13048.1| unknown protein [Arabidopsis thaliana]
gi|62320484|dbj|BAD95012.1| hypothetical protein [Arabidopsis thaliana]
gi|332659368|gb|AEE84768.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 495
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D I++KSGWD+YGI YG PT + IRR+ S + +A GSEM
Sbjct: 261 SCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRRLTCISPDSAVIALGSEM 320
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I +S +GI +T GRGGY+K + + + + F G+ GSHP
Sbjct: 321 SGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMTMMTMKYVFWMTGSYGSHP 380
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-W 179
DD +DP ALP I I ++D++ N+T+ GI F IC+SN+++ ++ W
Sbjct: 381 DDHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVTITLSKKPKKVLW 440
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C+++ G + V P+PC L + C
Sbjct: 441 NCTDVSGYTSGVTPQPCQLLPEKQPGTVVPC 471
>gi|22329119|ref|NP_195070.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|27754320|gb|AAO22613.1| putative polygalacturonase [Arabidopsis thaliana]
gi|28393881|gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332660825|gb|AEE86225.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 475
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 119/199 (59%), Gaps = 1/199 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I G D +++KSGWD+YG+A RP++++ IRR+ + + S V GSEM
Sbjct: 265 SSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGTTRTCSGVGIGSEM 324
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI N+ VE IH++DS G+ +T KGRGGYI I ++ L + V H
Sbjct: 325 SGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPIRFSSGSNDHS 384
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +DP ALP + I +++ N A G++ F ++CL N++LL P + W+
Sbjct: 385 DDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTLLGLPKT-EKWK 443
Query: 181 CSNIHGSSESVFPEPCPEL 199
C ++ G + VFP CP+L
Sbjct: 444 CKDVSGYASDVFPLSCPQL 462
>gi|297802658|ref|XP_002869213.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315049|gb|EFH45472.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 119/199 (59%), Gaps = 1/199 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIEDC I G D I++KSGWD+YG+A RP++++ IRR+ + + S V GSEM
Sbjct: 265 SSTNVCIEDCYIESGDDLIAVKSGWDQYGMAVARPSSNIVIRRISGTTRTCSGVGIGSEM 324
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI N+ VE IH++DS G+ +T KGRGGYI I ++ L + V H
Sbjct: 325 SGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPIRFSSGSNDHS 384
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +DP ALP + I +++ N A G++ F ++CL N++LL P + W+
Sbjct: 385 DDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTLLGLPQT-EKWK 443
Query: 181 CSNIHGSSESVFPEPCPEL 199
C ++ G + VFP CP+L
Sbjct: 444 CKDVSGYASDVFPLSCPQL 462
>gi|326501406|dbj|BAK02492.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 121/200 (60%), Gaps = 1/200 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V IEDC I G D I++KSGWDEYGI + P+ + +RR+ S + + +A GSEM
Sbjct: 153 SSSHVKIEDCYIVSGDDCIAVKSGWDEYGIRFNMPSQHIVVRRLTCISPTSAMIALGSEM 212
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+VE ++ + + ++ GRGG+++ + + L+ + F GN G HP
Sbjct: 213 SGGIQDVRVEDNIAINTESAVRIKSGVGRGGFVRDVFVRRLSLHTMKWVFWMTGNYGQHP 272
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SW 179
D+ DP ALP + I ++D+ N+T+AG GI P+ IC+SN++ + P + W
Sbjct: 273 DNSSDPKALPEVTGINYRDVFAENVTMAGRMEGIPNDPYTGICMSNVTAQLAPKAKKLQW 332
Query: 180 ECSNIHGSSESVFPEPCPEL 199
C+++ G + V PEPCPEL
Sbjct: 333 NCTDVQGVAYGVSPEPCPEL 352
>gi|226491354|ref|NP_001148255.1| polygalacturonase [Zea mays]
gi|195616976|gb|ACG30318.1| polygalacturonase [Zea mays]
gi|219888097|gb|ACL54423.1| unknown [Zea mays]
gi|413941563|gb|AFW74212.1| polygalacturonase [Zea mays]
Length = 493
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 118/207 (57%), Gaps = 1/207 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS VCIEDC I G D +++KSGWD+YGI++G+P+T++ I+RV + + S V FGSEM
Sbjct: 282 SSSEVCIEDCYIESGDDLVAVKSGWDQYGISFGKPSTNIVIQRVSGTTPTCSGVGFGSEM 341
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV V +H+++S + +T GRGGYI I I+ + + V HP
Sbjct: 342 SGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITIASVAMEKVKVPIRFSRGADDHP 401
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLL-INPGSYNSW 179
DD +DP ALP I + D++G ++ A + A + IC N S I + W
Sbjct: 402 DDRYDPAALPRISNVLVSDVVGVHLQRAPMLEAVPGAVYEGICFRNFSFRGIRRQQDSRW 461
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNS 206
C +++G + VFP PC E S+S
Sbjct: 462 HCESVYGEAHDVFPAPCEEFRRDGSSS 488
>gi|357443849|ref|XP_003592202.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
gi|355481250|gb|AES62453.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
Length = 487
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 123/201 (61%), Gaps = 1/201 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IED I G D I++KSGWDEYGI G+P+ ++ +RR+ S + VA GSEM
Sbjct: 257 SSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRRLTCISPKSALVALGSEM 316
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V++E + ++ + + ++ GRG ++K I + +L + F G+ G HP
Sbjct: 317 SGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMDLNTLKYVFWMTGSYGDHP 376
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SW 179
D+ FDP+ALP I I ++D+ N+TIAG GI PF IC+SN+++ ++ W
Sbjct: 377 DNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISNDPFTGICVSNVTIEMSAHKKKLPW 436
Query: 180 ECSNIHGSSESVFPEPCPELE 200
C++I G + +V P+PC L+
Sbjct: 437 NCTDISGVTSNVVPKPCELLK 457
>gi|356522584|ref|XP_003529926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 498
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 126/212 (59%), Gaps = 2/212 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D +++KSGWDE+GI +G PT + IRR+ S +++A GSEM
Sbjct: 263 SCTNTRIEDCYIVSGDDCVAVKSGWDEFGIKFGWPTKQLVIRRLTCISPQSAAIALGSEM 322
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I + +G+ +T+ GRGGY+K I + ++ + AF GN GS+
Sbjct: 323 SGGIQDVRAEDITAIHTESGVRIKTSIGRGGYVKDIYVRRMTMHTMKWAFWMTGNYGSYA 382
Query: 121 DDD-FDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNS 178
++ +DP ALP I I ++D++ N+T+A GI +PF IC++N+++ + + +
Sbjct: 383 NNSHYDPKALPEIKGINYRDVVADNVTMAATLEGISNSPFTGICIANVTISMADKANEKP 442
Query: 179 WECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
W C++I G + V P+PC L + TC
Sbjct: 443 WTCTDIEGITSGVTPKPCNSLLDKGPEKIKTC 474
>gi|226508288|ref|NP_001151102.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|195644332|gb|ACG41634.1| glycoside hydrolase, family 28 [Zea mays]
gi|219886803|gb|ACL53776.1| unknown [Zea mays]
gi|414864493|tpg|DAA43050.1| TPA: glycoside hydrolase, family 28 [Zea mays]
Length = 463
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 120/200 (60%), Gaps = 1/200 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V IEDC I G D +++KSGWDEYGI + P+ + IRR+ S + + +A GSEM
Sbjct: 238 SSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIRRLTCVSPTSAMIALGSEM 297
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E ++ + + ++ GRGG+++ I + L+ + F GN G HP
Sbjct: 298 SGGIRDVRAEDSVAINTESAVRVKSGAGRGGFVRDIFVRGLSLHTMKWVFWMTGNYGQHP 357
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SW 179
D+ DP+A+P + I + D+ N+T+AG GI + P+ IC+SN++ + P + W
Sbjct: 358 DNTSDPNAMPEVTGINYSDVFAENVTMAGRMEGIPKDPYTGICISNVTARLAPDAKELQW 417
Query: 180 ECSNIHGSSESVFPEPCPEL 199
C+N+ G + V P+PCPEL
Sbjct: 418 NCTNVKGVTSHVSPKPCPEL 437
>gi|15233124|ref|NP_191708.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|42572755|ref|NP_974473.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|334186188|ref|NP_001190154.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6850840|emb|CAB71079.1| putative protein [Arabidopsis thaliana]
gi|332646690|gb|AEE80211.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646691|gb|AEE80212.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646692|gb|AEE80213.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 476
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 122/209 (58%), Gaps = 1/209 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D I++KSGWDEYGI++G PT + IRR+ S +++A GSEM
Sbjct: 238 SCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSEM 297
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I Y + +G+ +T GRG ++K I + L+ + F GN +H
Sbjct: 298 SGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAHA 357
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-W 179
D +DP ALP I I ++DI+ N+++AG GI PF IC+SN ++ + + W
Sbjct: 358 DSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAIW 417
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSS 208
CS++ G + V P+PC L+ S ++
Sbjct: 418 MCSDVEGVTSGVDPKPCDLLDGQESETTK 446
>gi|357494037|ref|XP_003617307.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518642|gb|AET00266.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 450
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 127/202 (62%), Gaps = 4/202 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D +++KSGWDEYGIAYGR ++++ IRRV SS + +A GSE
Sbjct: 238 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRSSSNITIRRVS-GSSPFAGIAVGSET 296
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ N+ E I+LY+ GI +T GRGGYIK I +S+ + N G+ G H
Sbjct: 297 SGGVENILAEHINLYNMGIGIHIKTNIGRGGYIKNINVSNVYIENARKGIKISGDVGDHA 356
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN--- 177
DD +D +ALP + IT ++ G + AG G++ +PF +ICLS+I+L G+ +
Sbjct: 357 DDKYDSNALPIVKGITMANVWGVKVLQAGLIKGMKHSPFTDICLSDINLHGVNGTRSRTP 416
Query: 178 SWECSNIHGSSESVFPEPCPEL 199
SW+CS++ G + V P PC EL
Sbjct: 417 SWQCSDVSGVALQVSPWPCSEL 438
>gi|297817470|ref|XP_002876618.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322456|gb|EFH52877.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 121/209 (57%), Gaps = 1/209 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D I++KSGWDEYGI++G PT + IRR+ S +++A GSEM
Sbjct: 238 SCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSEM 297
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I Y + +G+ +T GRG ++K I + L+ + F GN +H
Sbjct: 298 SGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAHA 357
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-W 179
D +DP ALP I I ++DI+ N+++AG GI PF IC+SN ++ + + W
Sbjct: 358 DSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAIW 417
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSS 208
CS++ G + V P+PC L+ S +
Sbjct: 418 MCSDVEGVTSGVDPKPCDLLDGQESETKK 446
>gi|297803786|ref|XP_002869777.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315613|gb|EFH46036.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D I++KSGWD+YGI YG PT + IRR+ S + +A GSEM
Sbjct: 260 SCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRRLTCISPDSAVIALGSEM 319
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I +S +GI +T GRGGY+K + + + + F G+ GSHP
Sbjct: 320 SGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMTMNTMKYVFWMTGSYGSHP 379
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-W 179
D+ +DP ALP I I ++D++ N+T+ GI F IC+SN+++ ++ W
Sbjct: 380 DEHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVTITLSKKPKKVLW 439
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C+++ G + V P+PC L + C
Sbjct: 440 NCTDVSGYTSGVTPQPCQLLPEKQPGTVVPC 470
>gi|356534103|ref|XP_003535597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 466
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 115/200 (57%), Gaps = 1/200 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N+ IEDC I G D I++KSGWDEYGI +G PT + IRR+ S + +A GSEM
Sbjct: 241 SCSNIRIEDCNITSGDDCIAVKSGWDEYGIRFGMPTQHLIIRRITCVSPDSAMIALGSEM 300
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E + ++ + +T GRGGY+K I + L + F G G HP
Sbjct: 301 SGGIYDVRAEDLTAINTEAAVRIKTAIGRGGYVKNIFVKGMNLNTMKYVFWITGTYGDHP 360
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SW 179
D +DP ALP I I ++D++ TN+T + GI PF IC+SN+S+ ++ W
Sbjct: 361 DPGYDPKALPYITGINYRDVVATNVTKSARLEGISNDPFTGICISNVSIQVSEQQKKLQW 420
Query: 180 ECSNIHGSSESVFPEPCPEL 199
CSNI G + +V P PC L
Sbjct: 421 NCSNISGVTSNVTPYPCALL 440
>gi|326524051|dbj|BAJ97036.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 122/207 (58%), Gaps = 1/207 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS VCIEDC I G D +++KSGWD+YGI+ G+P++++ I+RV + + S V FGSEM
Sbjct: 272 SSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSEM 331
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV V +H+++S + + +T GRGGYI I I++ + + V H
Sbjct: 332 SGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNITIANVTMEKVKVPIRFSRGSDDHS 391
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D ALP I I DI+G ++ A + A + IC N+SL W+
Sbjct: 392 DDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVYEGICFRNVSLRAIRRQVR-WQ 450
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSS 207
C +++G + VFP PC EL N+ S+SS
Sbjct: 451 CESVYGEAHEVFPAPCEELRNNGSSSS 477
>gi|357443847|ref|XP_003592201.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481249|gb|AES62452.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 478
Score = 169 bits (428), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 1/201 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IED I G D I++KSGWDEYGI G P+ + IRR+ S + VA GSEM
Sbjct: 248 SCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSEM 307
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V++E + ++ + I ++ GRG ++K I + +L + F G+ G HP
Sbjct: 308 SGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYVFWMTGSYGDHP 367
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SW 179
D+ FDP+ALP I I ++D+ N+TIAG GI PF IC+SN+++ ++ W
Sbjct: 368 DNGFDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTIEMSAHKKKLPW 427
Query: 180 ECSNIHGSSESVFPEPCPELE 200
C++I G + +V P+PC L+
Sbjct: 428 NCTDISGVTSNVVPKPCELLQ 448
>gi|356516364|ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 477
Score = 169 bits (428), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 118/206 (57%), Gaps = 1/206 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I G D +++KSGWD YGI P+T++ +RR+ + + S V GSEM
Sbjct: 268 SSTNVCIEDNYIESGDDLVAIKSGWDHYGITMAHPSTNIIVRRISGTTPTCSGVGIGSEM 327
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISN+ +E +H++DS G+ ++ KGRGGYI + ISD + + + HP
Sbjct: 328 SGGISNITIENLHVWDSAAGVRIKSDKGRGGYITNVSISDIRMERVKIPIRFSRGSNDHP 387
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +DP A+P I +++ N T A G++ + F +C NI+L W
Sbjct: 388 DDGWDPKAVPRFKDILISNVVSVNSTKAPVLEGVEGSSFEGLCFKNITLH-GVALSARWR 446
Query: 181 CSNIHGSSESVFPEPCPELENSSSNS 206
C + G + VFP PCPEL N+S +S
Sbjct: 447 CEYVSGFATEVFPVPCPELRNNSYSS 472
>gi|357443845|ref|XP_003592200.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481248|gb|AES62451.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 481
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 118/200 (59%), Gaps = 1/200 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IED I G D I++KSGWDEYGI +G+P+ + IRR+ S + VA GSEM
Sbjct: 249 SCTNVRIEDNYIVSGDDCIAIKSGWDEYGIKFGKPSQQIIIRRLTCISPKSAMVALGSEM 308
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+VE + + + + +T GRG Y+K I + L + F G+ SHP
Sbjct: 309 SGGIQDVRVEDVTAIKTESAVRIKTAIGRGAYVKDIFVKGMNLDTMKYVFWMTGSYKSHP 368
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SW 179
D+ FDP+ALP I +I ++D+ N+TIAG GI PF IC+SN ++ ++ W
Sbjct: 369 DNGFDPNALPKISEINYRDVTAKNVTIAGKLDGISNDPFTGICVSNATIEMSAHKKKLPW 428
Query: 180 ECSNIHGSSESVFPEPCPEL 199
C+++ G + +V P PC L
Sbjct: 429 NCTDVSGVTSNVSPTPCELL 448
>gi|388521929|gb|AFK49026.1| unknown [Lotus japonicus]
Length = 388
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 115/200 (57%), Gaps = 1/200 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D I++KSGWDEYGI G P+ + IRR+ S + +A GSEM
Sbjct: 184 SCSNTRIEDCYIVSGDDCIAVKSGWDEYGIKVGMPSQHIIIRRLTCISPDSAMIALGSEM 243
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +++ E + ++ + + +T GRG Y++ I + L+ + F G+ GSHP
Sbjct: 244 SGGIQDIRAEDLTAINTQSAVRIKTAVGRGAYVRNIFVEGMNLFTMKYVFWMTGSYGSHP 303
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D FDP ALP I I ++D+I N+ GI PF IC+SN ++ G +W
Sbjct: 304 DTGFDPKALPTITGINYRDVIAKNVAYPAKLEGIANDPFTGICISNANIE-KVGKKLAWN 362
Query: 181 CSNIHGSSESVFPEPCPELE 200
C+++HG + +V PEPC L+
Sbjct: 363 CTDVHGVTSNVSPEPCALLQ 382
>gi|326516252|dbj|BAJ88149.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 297
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 122/207 (58%), Gaps = 1/207 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS VCIEDC I G D +++KSGWD+YGI+ G+P++++ I+RV + + S V FGSEM
Sbjct: 87 SSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSEM 146
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV V +H+++S + + +T GRGGYI I I++ + + V H
Sbjct: 147 SGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNITIANVTMEKVKVPIRFSRGSDDHS 206
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D ALP I I DI+G ++ A + A + IC N+SL W+
Sbjct: 207 DDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVYEGICFRNVSLRAIRRQVR-WQ 265
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSS 207
C +++G + VFP PC EL N+ S+SS
Sbjct: 266 CESVYGEAHEVFPAPCEELRNNGSSSS 292
>gi|242042413|ref|XP_002468601.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
gi|241922455|gb|EER95599.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
Length = 463
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 120/200 (60%), Gaps = 1/200 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V IEDC I G D +++KSGWDEYGI + P+ + IRR+ S + + +A GSEM
Sbjct: 238 SSTHVKIEDCYIVSGDDCVAVKSGWDEYGIKFNMPSQHIVIRRLTCISPTSAMIALGSEM 297
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E ++ + + ++ GRGG++K I + L+ + F GN G HP
Sbjct: 298 SGGIRDVRAEDNIAINTESAVRIKSGAGRGGFVKDIFVRGLSLHTMKWVFWMTGNYGQHP 357
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SW 179
D+ +P+A+P + I + D+ N+T AG GI P+ IC+SN++ + P + W
Sbjct: 358 DNTSNPNAMPEVTGINYSDVFAENVTTAGRMEGIPNDPYTGICISNVTASLAPNATELQW 417
Query: 180 ECSNIHGSSESVFPEPCPEL 199
C+N+ G + +V P+PCPEL
Sbjct: 418 NCTNVKGVTSNVSPKPCPEL 437
>gi|413942575|gb|AFW75224.1| glycoside hydrolase, family 28 [Zea mays]
Length = 506
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 121/203 (59%), Gaps = 1/203 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V IEDC I G D +++KSGWDEYGI+YG P+ + IRR+ S + + +A GSEM
Sbjct: 274 SCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEM 333
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I ++ + + +T GRG Y++ + L + F G+ SHP
Sbjct: 334 SGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRMTLTTMKRVFWMTGDYKSHP 393
Query: 121 DDDFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISLLINPGSYNSW 179
DD +DP+A+P + I+++D++ T + A GIQ APF IC++N++ ++ W
Sbjct: 394 DDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFRGICVANVTADLSKSRKYPW 453
Query: 180 ECSNIHGSSESVFPEPCPELENS 202
C++I G S +V P PC L+ +
Sbjct: 454 NCADIEGVSANVSPAPCDPLQGA 476
>gi|357114278|ref|XP_003558927.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 462
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 119/200 (59%), Gaps = 1/200 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V IEDC I G D I++KSGWDEYGI + P+ + +RR+ S + + +A GSEM
Sbjct: 237 SSSYVKIEDCYIVSGDDCIAVKSGWDEYGIKFNMPSQHIVVRRLTCISPTSAMIALGSEM 296
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E ++ + + ++ GRGG++K + + L+ + F GN G HP
Sbjct: 297 SGGIQDVRAEDNIAINTESAVRIKSGVGRGGFVKDVFVRGLSLHTMKWVFWMTGNYGQHP 356
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SW 179
D+ +P ALP + I ++D+ N+T+AG GI P+ IC+SN++ + P + W
Sbjct: 357 DNSSNPKALPEVTGINYRDVFAENVTMAGRMEGIPNDPYTGICMSNVTAQLAPDAKKLQW 416
Query: 180 ECSNIHGSSESVFPEPCPEL 199
C+++ G + V P+PCPEL
Sbjct: 417 NCTDVKGVASGVSPKPCPEL 436
>gi|226506670|ref|NP_001151164.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|194707808|gb|ACF87988.1| unknown [Zea mays]
gi|413942574|gb|AFW75223.1| glycoside hydrolase, family 28 [Zea mays]
Length = 486
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 121/203 (59%), Gaps = 1/203 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V IEDC I G D +++KSGWDEYGI+YG P+ + IRR+ S + + +A GSEM
Sbjct: 254 SCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEM 313
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I ++ + + +T GRG Y++ + L + F G+ SHP
Sbjct: 314 SGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRMTLTTMKRVFWMTGDYKSHP 373
Query: 121 DDDFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISLLINPGSYNSW 179
DD +DP+A+P + I+++D++ T + A GIQ APF IC++N++ ++ W
Sbjct: 374 DDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFRGICVANVTADLSKSRKYPW 433
Query: 180 ECSNIHGSSESVFPEPCPELENS 202
C++I G S +V P PC L+ +
Sbjct: 434 NCADIEGVSANVSPAPCDPLQGA 456
>gi|326521404|dbj|BAJ96905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 131/200 (65%), Gaps = 2/200 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCI C + G D I +KSGWDEYGI++ + ++++ I + ++ G+ +A GSEM
Sbjct: 236 SSTNVCISHCYVRNGDDVIVIKSGWDEYGISFAQSSSNISISNITGETGGGAGIAIGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS V+ E + + +SL+GI +T GRGGY++ + I+D ++N+++A GN G HP
Sbjct: 296 SGGISEVRAEGLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHP 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D +D +ALP I IT ++++G ++ +AG GI+ F++IC+SN+SL + P W
Sbjct: 356 DSKYDKNALPIISNITIENVVGIDVGVAGILEGIEGDNFSSICISNVSLSVRP--RYPWN 413
Query: 181 CSNIHGSSESVFPEPCPELE 200
CS I G S SV PE C +L+
Sbjct: 414 CSRIQGYSNSVTPESCEQLK 433
>gi|195644726|gb|ACG41831.1| glycoside hydrolase, family 28 [Zea mays]
Length = 439
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 121/203 (59%), Gaps = 1/203 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V IEDC I G D +++KSGWDEYGI+YG P+ + IRR+ S + + +A GSEM
Sbjct: 207 SCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEM 266
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I ++ + + +T GRG Y++ + L + F G+ SHP
Sbjct: 267 SGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRMTLTTMKRVFWMTGDYKSHP 326
Query: 121 DDDFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISLLINPGSYNSW 179
DD +DP+A+P + I+++D++ T + A GIQ APF IC++N++ ++ W
Sbjct: 327 DDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFRGICVANVTADLSKSRKYPW 386
Query: 180 ECSNIHGSSESVFPEPCPELENS 202
C++I G S +V P PC L+ +
Sbjct: 387 NCADIEGVSANVSPAPCDPLQGA 409
>gi|413920258|gb|AFW60190.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 163
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 114/158 (72%), Gaps = 2/158 (1%)
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
MSGGIS++ V + ++DS GI F+T+ GRGGYI+ +VIS+ ++ N++V GNC +H
Sbjct: 1 MSGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQMENVHVGIEFTGNCSTH 60
Query: 120 PDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGS-YNS 178
PDD FDP LPAID +T K++ GTNI++AG +GI+ APF ICLSN++ + GS +S
Sbjct: 61 PDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAICLSNLNFSMAAGSGPSS 120
Query: 179 WECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRY 216
W CS++ G SE+VFPEPC EL + SS SSS C+SL Y
Sbjct: 121 WSCSDVSGYSEAVFPEPCTELRDPSS-SSSVCYSLASY 157
>gi|242077899|ref|XP_002443718.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
gi|241940068|gb|EES13213.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
Length = 497
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 118/206 (57%), Gaps = 1/206 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS VCIEDC I G D +++KSGWD+YGI+ G+P+T++ I+RV + + S V FGSEM
Sbjct: 288 SSSEVCIEDCYIESGDDLVAVKSGWDQYGISLGKPSTNIVIQRVSGTTPTCSGVGFGSEM 347
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV V +H+++S + +T GRGGYI I IS+ + + V H
Sbjct: 348 SGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITISNVTMEKVKVPIRFSRGADDHS 407
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD++D ALP I + D++G ++ A + A + IC N SL + W
Sbjct: 408 DDNYDRTALPRISNVLISDVVGVDLQRAPMLEAVPGAVYEEICFRNFSLR-GIRRQDRWH 466
Query: 181 CSNIHGSSESVFPEPCPELENSSSNS 206
C +++G + VFP PC E + S+S
Sbjct: 467 CESVYGEAHEVFPAPCEEFRKNGSSS 492
>gi|326496208|dbj|BAJ94566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 131/200 (65%), Gaps = 2/200 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCI C + G D I +KSGWDEYGI++ + ++++ I + ++ G+ +A GSEM
Sbjct: 236 SSTNVCISHCYVRNGDDVIVIKSGWDEYGISFAQSSSNISISNITGETGGGAGIAIGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS V+ E + + +SL+GI +T GRGGY++ + I+D ++N+++A GN G HP
Sbjct: 296 SGGISEVRAEGLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHP 355
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D +D +ALP I IT ++++G ++ +AG GI+ F++IC+SN+SL + S W
Sbjct: 356 DSKYDKNALPIISNITIENVVGIDVGVAGILEGIEGDNFSSICISNVSLSVR--SRYPWN 413
Query: 181 CSNIHGSSESVFPEPCPELE 200
CS I G S SV PE C +L+
Sbjct: 414 CSRIQGYSNSVTPESCEQLK 433
>gi|358248902|ref|NP_001240215.1| uncharacterized protein LOC100785005 precursor [Glycine max]
gi|255635243|gb|ACU17976.1| unknown [Glycine max]
Length = 477
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 117/200 (58%), Gaps = 3/200 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N+ IEDC I G D +++KSGWDEYGI +G P+ + IRR+ S + +A GSEM
Sbjct: 246 SCSNIRIEDCYIVSGDDCVAIKSGWDEYGIKFGMPSQHIIIRRLECVSPDSAMIALGSEM 305
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E + ++ + + +T GRG Y++ I I L + F G+ SHP
Sbjct: 306 SGGIQDVRAEDLTAINTQSAVRIKTAVGRGAYVRDIFIKGMNLNTMKYVFWMTGSYSSHP 365
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SW 179
D+ FDP LP I I ++D+I N+T + GI PF IC+SN++ I+ G W
Sbjct: 366 DNGFDPKTLPNITGINYRDVIAENVTYSARLEGIANDPFTGICISNVT--IHSGKKKLQW 423
Query: 180 ECSNIHGSSESVFPEPCPEL 199
C++I G + +V+P+PC L
Sbjct: 424 NCTDIEGVTSNVYPKPCELL 443
>gi|359490611|ref|XP_002273143.2| PREDICTED: probable polygalacturonase-like, partial [Vitis
vinifera]
Length = 432
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 116/201 (57%), Gaps = 1/201 (0%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
NV IEDC I G D I++KSGWD+YGI YG PT D+ IRR+ S + +A GSEMSGG
Sbjct: 201 NVKIEDCYIVSGDDCIAVKSGWDQYGIKYGVPTRDIVIRRLTCISPDSAVIALGSEMSGG 260
Query: 64 ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPDDD 123
I NV+ E I +S +G+ +T GRGGY++ I + + F + GSHPDD+
Sbjct: 261 IKNVRAEDITAINSQSGVRIKTGVGRGGYVQDIYARKMTMKTMKYVFWMTSDYGSHPDDE 320
Query: 124 FDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSWECS 182
+D A+P I+ I +++++ N+T + GI F IC+S++++ L W C+
Sbjct: 321 WDRKAIPKIENINYREVVAENVTYSARLDGIAGDKFTGICISDVTIRLTQKPKQLQWNCT 380
Query: 183 NIHGSSESVFPEPCPELENSS 203
N+ G + V P+ C L S
Sbjct: 381 NVEGVTSQVTPQSCDLLPPSK 401
>gi|356530824|ref|XP_003533980.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 118/200 (59%), Gaps = 3/200 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D +++KSGWDE GI +G P+ + IRR+ S + +A GSEM
Sbjct: 246 SCSNTRIEDCYIVSGDDCVAIKSGWDESGIKFGMPSQHIIIRRLECVSPDSAMIALGSEM 305
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E++ ++ + + +T GRG Y++ I + L + F G+ GSHP
Sbjct: 306 SGGIRDVRAEELTALNTQSAVRIKTAVGRGAYVRDIFVKGMNLNTMKYVFWMTGSYGSHP 365
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SW 179
+ DFDP ALP I I ++D+I N+T + GI PF IC+SN++ I+ G W
Sbjct: 366 NTDFDPKALPNITGINYRDVIADNVTYSARLEGIANDPFTGICISNVT--IHSGKKKPQW 423
Query: 180 ECSNIHGSSESVFPEPCPEL 199
C++I G + +V+P+PC L
Sbjct: 424 NCTDIEGVTSNVYPKPCELL 443
>gi|125601928|gb|EAZ41253.1| hypothetical protein OsJ_25761 [Oryza sativa Japonica Group]
Length = 482
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 118/206 (57%), Gaps = 1/206 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS VCIEDC I G D +++KSGWD+YGI+ G+P++++ I+RV + + S V FGSEM
Sbjct: 273 SSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSEM 332
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV + +H+++S + +T GRGGYI I I + + + V H
Sbjct: 333 SGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRMEKVKVPIRFSRGADDHS 392
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D ALP I + +D++G ++ A + A + IC N+SL + + W
Sbjct: 393 DDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGICFRNVSLTVIK-RQDRWH 451
Query: 181 CSNIHGSSESVFPEPCPELENSSSNS 206
C +++G + V P PC E + S+S
Sbjct: 452 CESVYGEAHDVLPAPCEEFRRNGSSS 477
>gi|125559874|gb|EAZ05322.1| hypothetical protein OsI_27527 [Oryza sativa Indica Group]
Length = 482
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 118/206 (57%), Gaps = 1/206 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS VCIEDC I G D +++KSGWD+YGI+ G+P++++ I+RV + + S V FGSEM
Sbjct: 273 SSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSEM 332
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV + +H+++S + +T GRGGYI I I + + + V H
Sbjct: 333 SGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRMEKVKVPIRFSRGADDHS 392
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D ALP I + +D++G ++ A + A + IC N+SL + + W
Sbjct: 393 DDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGICFRNVSLTVIK-RQDRWH 451
Query: 181 CSNIHGSSESVFPEPCPELENSSSNS 206
C +++G + V P PC E + S+S
Sbjct: 452 CESVYGEAHDVLPAPCEEFRRNGSSS 477
>gi|115474399|ref|NP_001060796.1| Os08g0107300 [Oryza sativa Japonica Group]
gi|42408232|dbj|BAD09389.1| putative exo-poly-alpha-D-galacturonosidase precursor [Oryza sativa
Japonica Group]
gi|113622765|dbj|BAF22710.1| Os08g0107300 [Oryza sativa Japonica Group]
Length = 482
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 118/206 (57%), Gaps = 1/206 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS VCIEDC I G D +++KSGWD+YGI+ G+P++++ I+RV + + S V FGSEM
Sbjct: 273 SSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSEM 332
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV + +H+++S + +T GRGGYI I I + + + V H
Sbjct: 333 SGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRMEKVKVPIRFSRGADDHS 392
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D ALP I + +D++G ++ A + A + IC N+SL + + W
Sbjct: 393 DDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGICFRNVSLTVIK-RQDRWH 451
Query: 181 CSNIHGSSESVFPEPCPELENSSSNS 206
C +++G + V P PC E + S+S
Sbjct: 452 CESVYGEAHDVLPAPCEEFRRNGSSS 477
>gi|356547950|ref|XP_003542367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 491
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 124/202 (61%), Gaps = 1/202 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IEDC I++G DAI++KSGWD+YGIAYGRP+ ++ IR ++++S + ++ GSEM
Sbjct: 267 SCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRSMVSAGISIGSEM 326
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+SNV VE I ++DS G+ +T +GRG Y++QI + N+ V + HP
Sbjct: 327 SGGVSNVMVENILIWDSRRGVRIKTARGRGAYVRQITYRNITFENVRVGIVMKTDYNEHP 386
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +DP ALP + I+F + G + + G +E P N+ ++S+ + + ++
Sbjct: 387 DDGYDPMALPILRDISFTTVHGQGVRVPVRIHGSEEIPVRNVTFQDMSVGLTYKKKHIFQ 446
Query: 181 CSNIHGSS-ESVFPEPCPELEN 201
C+ + G +++P PC L+
Sbjct: 447 CAFVQGRVIGTIYPAPCENLDR 468
>gi|356574519|ref|XP_003555394.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Glycine max]
Length = 305
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 117/202 (57%), Gaps = 3/202 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D +++KSGWDEYGI +G+PT + IRR+ S + +A GSEM
Sbjct: 73 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAVIALGSEM 132
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGG--YIKQIVISDAELYNINVAFGACGNCGS 118
SGGI +V+VE I + + + +T GRG Y+K I + L + F G+ GS
Sbjct: 133 SGGIQDVRVEDIIAISTQSTVRIKTAVGRGAMXYVKDIFVKGMSLSTMKYVFWMTGSYGS 192
Query: 119 HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN- 177
HPD FDP ALP I I ++D++ TN+T + GI APF IC+SN+S+ ++
Sbjct: 193 HPDAGFDPKALPNITGINYRDVVATNVTYSAKLEGISNAPFTGICISNVSIQVSEQRKKL 252
Query: 178 SWECSNIHGSSESVFPEPCPEL 199
W C+++ G + +V P C L
Sbjct: 253 QWNCTDVAGVTSNVSPNSCQLL 274
>gi|326532444|dbj|BAK05151.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 121/201 (60%), Gaps = 1/201 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +NV IE+C I++G D +++KSGWD+YGIAYGRP+T++ IR V+++S + V+ GSEM
Sbjct: 306 SCENVMIENCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRNVIIRSMVSAGVSIGSEM 365
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+SNV VE +H++ S G+ +T GRG Y+ IV + L N+ V + HP
Sbjct: 366 SGGVSNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITLENVRVGIVIKTDYNEHP 425
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ FDP A+P I++ I G + + G E P N+ ++S+ I ++ ++
Sbjct: 426 DELFDPKAVPVGGNISYTSIHGQRVRVPVRIQGSAEIPVRNVTFHDMSVGILDKKHHVFQ 485
Query: 181 CSNIHGSSES-VFPEPCPELE 200
CS + G VFP PC L+
Sbjct: 486 CSFVQGQVIGYVFPVPCKNLD 506
>gi|224077474|ref|XP_002305262.1| predicted protein [Populus trichocarpa]
gi|222848226|gb|EEE85773.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 117/205 (57%), Gaps = 2/205 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IEDC I G D I++KSG D+YGI G P + IRR+ S +++A GSEM
Sbjct: 209 SCTNVIIEDCYIVSGDDCIAVKSGLDQYGIKVGMPMKQLVIRRITCISPKSAAIALGSEM 268
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V++E I ++ + + +T GRGGY+K I + L + F G+ SH
Sbjct: 269 SGGIEDVRIEDITAINTESAVRVKTAVGRGGYVKDIFVRRMTLKTMKYVFWMIGSYSSHA 328
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEA-PFANICLSNISL-LINPGSYNS 178
D+ +DP ALP I I F+DI N+TI G G+ E PF IC+SN+++ L +
Sbjct: 329 DEGYDPKALPEITNINFRDIAADNVTIPGKLEGLGEGNPFTGICISNVTMTLAEKHKEPA 388
Query: 179 WECSNIHGSSESVFPEPCPELENSS 203
W C+++ G S +V P PC L S
Sbjct: 389 WNCTDVSGVSSNVTPMPCAALPKKS 413
>gi|115450425|ref|NP_001048813.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|108705945|gb|ABF93740.1| polygalacturonase, putative, expressed [Oryza sativa Japonica
Group]
gi|113547284|dbj|BAF10727.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|125584758|gb|EAZ25422.1| hypothetical protein OsJ_09236 [Oryza sativa Japonica Group]
Length = 458
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 117/200 (58%), Gaps = 1/200 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V IED I G D I++KSGWD+YGI + P+ + IRR+ S + + +A GSEM
Sbjct: 233 SSSHVKIEDSYIVSGDDCIAVKSGWDQYGIKFNMPSQHILIRRLTCISPTSAMIALGSEM 292
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ D+ + + ++ GRGGY+K + + L+ + F GN G HP
Sbjct: 293 SGGIRDVRAVDNVAIDTESAVRIKSGVGRGGYVKDVFVRGLSLHTMKWVFWMTGNYGQHP 352
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SW 179
D+ DP+ALP + I + D+ N+T+AG GI P+ IC+SN++ + P + W
Sbjct: 353 DNSSDPNALPEVTGINYSDVFAENVTMAGRMEGIPNDPYTGICMSNVTAQLAPDAKKLQW 412
Query: 180 ECSNIHGSSESVFPEPCPEL 199
C+++ G + V P PCPEL
Sbjct: 413 NCTDVKGVASDVSPVPCPEL 432
>gi|357118995|ref|XP_003561232.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 512
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 116/202 (57%), Gaps = 1/202 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S V IEDC + G D +++KSGWDEYGIA G PT V +RR+ S + + VA GSEM
Sbjct: 268 SCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAAGIPTEHVIVRRLTCVSPTSALVAIGSEM 327
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ +V++E + D+ + + +T GRG Y+K I L + F G+ SHP
Sbjct: 328 SGGVRDVRIEDVAAVDTESAVRIKTAVGRGAYVKDIYARRMTLTGMKRVFWMTGDYKSHP 387
Query: 121 DDDFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISLLINPGSYNSW 179
DD +D A+P ++ ++F+D+ T + A GI APF IC++N+++ + W
Sbjct: 388 DDGYDKTAVPVVEGVSFQDVAATGVWKEAARMEGISGAPFKGICMANVTMEMTKPRKVMW 447
Query: 180 ECSNIHGSSESVFPEPCPELEN 201
C+++ G S V P PC +L+
Sbjct: 448 NCADVEGVSTGVTPAPCGQLQQ 469
>gi|411101510|gb|AFW04075.1| polygalacturonase [Litchi chinensis]
Length = 481
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 113/200 (56%), Gaps = 1/200 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S ++ IEDC I G D I++KSGWD+YGI G PT + IRRV S +++A GSEM
Sbjct: 249 SCTDIRIEDCYIVSGDDCIAVKSGWDQYGIKVGMPTQRLVIRRVTCISPDSATIALGSEM 308
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I D+ +G+ +T GRGGY+K I + + + F G+ G HP
Sbjct: 309 SGGIRDVRAEDITAIDTQSGVRIKTGVGRGGYVKDIYVRRMTMKTMKYVFWMTGSYGQHP 368
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SW 179
D FDP ALP I I ++D++ N+T + GI PF IC+ N+++ + W
Sbjct: 369 DPGFDPKALPDIHGINYRDMVAENVTYSARLDGIPNDPFKGICIFNVTITLTKKPKELQW 428
Query: 180 ECSNIHGSSESVFPEPCPEL 199
C+++ G + V P C L
Sbjct: 429 NCTDVQGVTSRVTPPACSLL 448
>gi|242044796|ref|XP_002460269.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
gi|241923646|gb|EER96790.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
Length = 518
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 122/201 (60%), Gaps = 1/201 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +NV I++C I++G D I++KSGWD+YGIAYGRP+ ++ I+ V+++S + V+ GSEM
Sbjct: 294 SCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANIVIQNVVIRSMVSAGVSIGSEM 353
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S+V VE +H++DS G+ +T GRG Y+ IV + L N+ V + HP
Sbjct: 354 SGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNIVYRNITLENVRVGIVIKTDYNEHP 413
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ FDP A+P I I++ I G + + G E P N+ ++S+ I ++ ++
Sbjct: 414 DEGFDPKAVPTIGNISYTSIHGHRVRVPVRIQGSAEIPVKNVTFHDMSIGIVDKKHHVFQ 473
Query: 181 CSNIHGSSES-VFPEPCPELE 200
CS + G VFP PC L+
Sbjct: 474 CSFVQGQVIGYVFPVPCKNLD 494
>gi|326490848|dbj|BAJ90091.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 117/203 (57%), Gaps = 1/203 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S V IEDC + G D +++KSGWDEYGIA G P+ + +RR+ S + + +A GSEM
Sbjct: 243 SCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAVGMPSEHISVRRLTCVSPTSAVIALGSEM 302
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I + + + +T GRG Y++ + L + F G+ SHP
Sbjct: 303 SGGIRDVRAEDITAIGTESAVRIKTAVGRGAYVRDVYARRMRLDGMKRVFWMTGDYKSHP 362
Query: 121 DDDFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISLLINPGSYNSW 179
DD +D A+P ++ I+++D++ T + A GIQ APF IC++N+++ + SW
Sbjct: 363 DDGYDKAAVPVVENISYQDVVATGVWKEAARMQGIQGAPFKGICMANVTMEMTKERKVSW 422
Query: 180 ECSNIHGSSESVFPEPCPELENS 202
C+++ G S V P PC L+ +
Sbjct: 423 NCADVEGVSAGVTPAPCAPLQGT 445
>gi|357450133|ref|XP_003595343.1| Polygalacturonase [Medicago truncatula]
gi|355484391|gb|AES65594.1| Polygalacturonase [Medicago truncatula]
gi|388518965|gb|AFK47544.1| unknown [Medicago truncatula]
Length = 474
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 125/197 (63%), Gaps = 1/197 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IEDC I++G DAI++KSGWD+YGIAY +P+ ++ IR ++++S+ + ++ GSEM
Sbjct: 250 SCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYAKPSKNIIIRNLVVRSNVSAGISIGSEM 309
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+SNV +E I +++S I +T GRGGY++QI + +N+ V + HP
Sbjct: 310 SGGVSNVTIENILVWESRRAIRIKTAPGRGGYVRQITYRNITFHNVRVGIVIKTDYNEHP 369
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +DP ALP + I+F +I G + + TG +E P N+ ++++ I + ++
Sbjct: 370 DDGYDPTALPILRDISFTNIRGEGVRVPVRITGSEEIPVRNVTFHDMNVGITYKKKHIFQ 429
Query: 181 CSNIHGSS-ESVFPEPC 196
C+ + G ++FP+PC
Sbjct: 430 CAFVEGRVIGTIFPKPC 446
>gi|357158595|ref|XP_003578178.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 532
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 121/201 (60%), Gaps = 1/201 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +NV I++C I++G D +++KSGWD+YGIAYGRP+T++ IR V ++S + V+ GSEM
Sbjct: 308 SCENVMIQNCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRDVTIRSMVSAGVSIGSEM 367
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+SNV VE +H++ S G+ +T GRG Y+ IV + L N+ V + HP
Sbjct: 368 SGGVSNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITLENVRVGIVIKTDYNEHP 427
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ F+P A+P + I++ I G + + G E P N+ ++S+ I ++ ++
Sbjct: 428 DEGFNPKAVPIVGNISYTSIHGQGVRVPVRIQGSAEIPVKNVTFHDMSVGILDKKHHVFQ 487
Query: 181 CSNIHGSSES-VFPEPCPELE 200
CS + G VFP PC L+
Sbjct: 488 CSYVQGQVIGYVFPVPCKNLD 508
>gi|413948635|gb|AFW81284.1| hypothetical protein ZEAMMB73_960645 [Zea mays]
Length = 458
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 118/204 (57%), Gaps = 2/204 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVC+EDC I+ G D IS+KSGWDEYG+A+GRP++ + +RR+ S + A GSE
Sbjct: 250 SSSNVCVEDCYISAGDDLISIKSGWDEYGVAFGRPSSGITVRRIT-GSGPFAGFAVGSET 308
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ +V E + G+ +T GRGG+I+ + +S L G+ G HP
Sbjct: 309 SGGVEDVVAEHLSFSGVGVGVHVKTNSGRGGFIRNVTVSQVTLDGARYGLRIAGDVGGHP 368
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLL-INPGSYNSW 179
++ LP ID + +++ G N+ AG GI+++ F+NICLSN+ L I S W
Sbjct: 369 GASYNASLLPVIDGVAVRNVWGRNVRQAGLIRGIRDSVFSNICLSNVKLYGIGSDSIGPW 428
Query: 180 ECSNIHGSSESVFPEPCPELENSS 203
C + GS+ V P PC EL ++S
Sbjct: 429 RCRAVSGSALDVQPSPCAELASTS 452
>gi|226509250|ref|NP_001149385.1| LOC100283011 precursor [Zea mays]
gi|195626846|gb|ACG35253.1| polygalacturonase [Zea mays]
Length = 446
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 118/204 (57%), Gaps = 2/204 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVC+EDC I+ G D IS+KSGWDEYG+A+GRP++ + +RR+ S + A GSE
Sbjct: 238 SSSNVCVEDCYISAGDDLISIKSGWDEYGVAFGRPSSGITVRRIT-GSGPFAGFAVGSET 296
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ +V E + G+ +T GRGG+I+ + +S L G+ G HP
Sbjct: 297 SGGVEDVVAEHLSFSGVGVGVHVKTNSGRGGFIRNVTVSQVTLDGARYGLRIAGDVGGHP 356
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLL-INPGSYNSW 179
++ LP +D + +++ G N+ AG GI+++ F+NICLSN+ L I S W
Sbjct: 357 GASYNASLLPVVDGVAVRNVWGRNVRQAGLIRGIRDSVFSNICLSNVKLYGIGSDSIGPW 416
Query: 180 ECSNIHGSSESVFPEPCPELENSS 203
C + GS+ V P PC EL ++S
Sbjct: 417 RCRAVSGSALDVQPSPCAELASTS 440
>gi|168021522|ref|XP_001763290.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685425|gb|EDQ71820.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 122/210 (58%), Gaps = 1/210 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV +E+C I++G DA+++KSGWD+YGI Y RP +V IR V+ +S + ++ GSEM
Sbjct: 230 SCKNVLVENCYISVGDDAVAVKSGWDKYGIEYNRPCVNVTIRNVIARSQISAGISIGSEM 289
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ V VE ++++ S GI +T+ GRGGY+K I+ + L ++ V + G HP
Sbjct: 290 SGGVEQVLVEDVYIWGSRRGIRIKTSPGRGGYVKNILYKNLTLIDVRVGIVVKTDYGEHP 349
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D DFDP ALP + I+F + G+++ G +E P I + N+++ + N +
Sbjct: 350 DLDFDPKALPVVANISFDGVYGSSVRYPVRMFGSKEVPITGIDIRNMNVGLTRKKRNVFT 409
Query: 181 CSNIHGSSE-SVFPEPCPELENSSSNSSST 209
C + G VFP PC L ++ ++T
Sbjct: 410 CDFLQGRVVGKVFPSPCKALIREEASQTAT 439
>gi|297821649|ref|XP_002878707.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324546|gb|EFH54966.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 107/200 (53%), Gaps = 1/200 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC + G D I++KSGWD++GI G PT + IRR+ S + +A GSEM
Sbjct: 250 SCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTKQLSIRRLTCISPDSAGIALGSEM 309
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V++E I L + + I +T GRGGY+K I + + F G HP
Sbjct: 310 SGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHP 369
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
FDP A+P I I ++D+ N+T G + PF IC+SNI + L W
Sbjct: 370 ASGFDPKAMPEITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLW 429
Query: 180 ECSNIHGSSESVFPEPCPEL 199
C+NI G S V P+PC L
Sbjct: 430 NCTNISGVSSKVTPKPCSLL 449
>gi|449452594|ref|XP_004144044.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 122/202 (60%), Gaps = 1/202 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IEDC I++G D I++KSGWD+YGIAYG+P+ ++ IR V+LQS + ++ GSEM
Sbjct: 269 SCEDMLIEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIRIRNVVLQSMVSAGISIGSEM 328
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S + VE + +++S G+ +T GRGGY++ I + L + V + HP
Sbjct: 329 SGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLDTVRVGIVIKTDYNEHP 388
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ +DP ALP + I+F I G + + G ++ P N+ ++S+ I + ++
Sbjct: 389 DEGYDPKALPVLKDISFTSIHGQGVRVPVRMHGSKDIPVRNVTFKDMSVGITYKKKHIFQ 448
Query: 181 CSNIHGSS-ESVFPEPCPELEN 201
C+ +HG ++FP PC L+
Sbjct: 449 CAFVHGRVIGTIFPAPCDNLDR 470
>gi|449500524|ref|XP_004161121.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 122/202 (60%), Gaps = 1/202 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IEDC I++G D I++KSGWD+YGIAYG+P+ ++ IR V+LQS + ++ GSEM
Sbjct: 269 SCEDMLIEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIRIRNVVLQSMVSAGISIGSEM 328
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S + VE + +++S G+ +T GRGGY++ I + L + V + HP
Sbjct: 329 SGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLDTVRVGIVIKTDYNEHP 388
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ +DP ALP + I+F I G + + G ++ P N+ ++S+ I + ++
Sbjct: 389 DEGYDPKALPVLKDISFTSIHGQGVRVPVRMHGSKDIPVRNVTFKDMSVGITYKKKHIFQ 448
Query: 181 CSNIHGSS-ESVFPEPCPELEN 201
C+ +HG ++FP PC L+
Sbjct: 449 CAFVHGRVIGTIFPAPCDNLDR 470
>gi|302783324|ref|XP_002973435.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
gi|300159188|gb|EFJ25809.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
Length = 468
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 125/204 (61%), Gaps = 1/204 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C I++G D +++KSGWD+YGI YG+P ++ IR + + + + V+ GSEM
Sbjct: 245 SCRNVLIENCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVNAPVSAGVSIGSEM 304
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI+NV VE +++++S G+ +TT GRGGY+ Q+ + + + V + G HP
Sbjct: 305 SGGITNVTVENVYIWNSKRGVRIKTTPGRGGYVTQVFYRNITMETVRVGIVIKTDYGDHP 364
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ +DP ALP +++I F I G+ + I G +E P + + ++++ + + ++
Sbjct: 365 DEFYDPTALPVVEKIFFDGIYGSEVRIPARIYGSKEVPVRGLEIRDMNVGVTRKKKHVFQ 424
Query: 181 CSNIHGSS-ESVFPEPCPELENSS 203
CS + G ++FP+PC +L SS
Sbjct: 425 CSFLQGQVFGTIFPKPCEDLGTSS 448
>gi|343172553|gb|AEL98980.1| putative polygalacturonase, partial [Silene latifolia]
gi|343172555|gb|AEL98981.1| putative polygalacturonase, partial [Silene latifolia]
Length = 431
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 118/208 (56%), Gaps = 4/208 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE I G D I++KSGWDEYGI + PT DV IR + S + +++A GSEM
Sbjct: 204 SCSNVRIEHNYIVSGDDCIAIKSGWDEYGIRFNMPTQDVVIRHLTCISPTSATIALGSEM 263
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS-- 118
SGGI NV+ E I D+ +GI +T+ GRG +++ I + + + F G S
Sbjct: 264 SGGIQNVRAEHITAIDTESGIRVKTSPGRGAFVRNIYVRKMTMKTMKYVFWMTGYYSSSR 323
Query: 119 -HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSY 176
HPD ++P ALP I+ I + D++ N+++ G GI+E F ICLSN+++ L
Sbjct: 324 VHPDRHYNPRALPVIEGINYMDMVAANVSMPGYLEGIKEDVFKGICLSNVTIGLAKKPKE 383
Query: 177 NSWECSNIHGSSESVFPEPCPELENSSS 204
W C+NI G + V P+PC L S +
Sbjct: 384 MLWNCTNIEGVASGVTPQPCGFLRESKA 411
>gi|414885630|tpg|DAA61644.1| TPA: hypothetical protein ZEAMMB73_326074 [Zea mays]
Length = 516
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 1/201 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +NV I++C I++G D I++KSGWD+YGIAYGRP+ ++ I+ V+++S + V+ GSEM
Sbjct: 292 SCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANITIQNVVIRSMVSAGVSIGSEM 351
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S+V VE +H++DS G+ +T GRG Y+ ++ + N+ V + HP
Sbjct: 352 SGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNVIYQNITFENVRVGIVIKTDYNEHP 411
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ FDP A+P I I++ I G + + G + P N+ ++S+ I ++ ++
Sbjct: 412 DEGFDPKAVPTIGNISYTSIHGHRVRVPVRIQGSAQIPVKNVTFHDMSIGIVDKKHHVFQ 471
Query: 181 CSNIHGSSES-VFPEPCPELE 200
CS + G VFP PC L+
Sbjct: 472 CSFVQGQVIGYVFPVPCKNLD 492
>gi|115479361|ref|NP_001063274.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|51091349|dbj|BAD36084.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51091399|dbj|BAD36142.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113631507|dbj|BAF25188.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|215768243|dbj|BAH00472.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 526
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 120/201 (59%), Gaps = 1/201 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +NV I++C I++G D I++KSGWD+YGIAYGRP+T++ I V ++S + V+ GSEM
Sbjct: 302 SCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRSMVSAGVSIGSEM 361
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+SNV VE +H++DS G+ +T GRG Y+ I + L +I V + HP
Sbjct: 362 SGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRVGIVIKTDYNEHP 421
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ FDP A+P I+ I++ I G + + G E P N+ ++S+ + + ++
Sbjct: 422 DEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVTFHDMSVGLVDRKNHVFQ 481
Query: 181 CSNIHGSSES-VFPEPCPELE 200
CS + G VFP PC L+
Sbjct: 482 CSFVQGQVIGYVFPVPCKNLD 502
>gi|222641659|gb|EEE69791.1| hypothetical protein OsJ_29512 [Oryza sativa Japonica Group]
Length = 426
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 120/201 (59%), Gaps = 1/201 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +NV I++C I++G D I++KSGWD+YGIAYGRP+T++ I V ++S + V+ GSEM
Sbjct: 202 SCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRSMVSAGVSIGSEM 261
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+SNV VE +H++DS G+ +T GRG Y+ I + L +I V + HP
Sbjct: 262 SGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRVGIVIKTDYNEHP 321
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ FDP A+P I+ I++ I G + + G E P N+ ++S+ + + ++
Sbjct: 322 DEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVTFHDMSVGLVDRKNHVFQ 381
Query: 181 CSNIHGSSES-VFPEPCPELE 200
CS + G VFP PC L+
Sbjct: 382 CSFVQGQVIGYVFPVPCKNLD 402
>gi|218202213|gb|EEC84640.1| hypothetical protein OsI_31518 [Oryza sativa Indica Group]
Length = 526
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 120/201 (59%), Gaps = 1/201 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +NV I++C I++G D I++KSGWD+YGIAYGRP+T++ I V ++S + V+ GSEM
Sbjct: 302 SCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRSMVSAGVSIGSEM 361
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+SNV VE +H++DS G+ +T GRG Y+ I + L +I V + HP
Sbjct: 362 SGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRVGIVIKTDYNEHP 421
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ FDP A+P I+ I++ I G + + G E P N+ ++S+ + + ++
Sbjct: 422 DEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVTFHDMSVGLVDRRNHVFQ 481
Query: 181 CSNIHGSSES-VFPEPCPELE 200
CS + G VFP PC L+
Sbjct: 482 CSFVQGQVIGYVFPVPCRNLD 502
>gi|42569272|ref|NP_179968.2| Pectin lyase-like protein [Arabidopsis thaliana]
gi|91806252|gb|ABE65854.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
gi|330252406|gb|AEC07500.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 477
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 107/200 (53%), Gaps = 1/200 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC + G D I++KSGWD++GI G PT + IRR+ S + +A GSEM
Sbjct: 250 SCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEM 309
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V++E I L + + I +T GRGGY+K I + + F G HP
Sbjct: 310 SGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHP 369
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
FDP A+P I I ++D+ N+T G + PF IC+SNI + L W
Sbjct: 370 ASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLW 429
Query: 180 ECSNIHGSSESVFPEPCPEL 199
C++I G S V P+PC L
Sbjct: 430 NCTSISGVSSKVTPKPCSLL 449
>gi|356565754|ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
Length = 492
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 122/202 (60%), Gaps = 1/202 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IEDC I++G DAI++KSGWD+YGI YGRP+ ++ IR ++++S + ++ GSEM
Sbjct: 268 SCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMNIMIRNLVVRSMVSAGISIGSEM 327
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+SNV VE + ++DS G+ +T GRG Y++QI + N+ V + HP
Sbjct: 328 SGGVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITYRNITFENVRVGIVMKTDYNEHP 387
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +DP ALP + I+F + G + + G +E P N+ ++S+ + + ++
Sbjct: 388 DDGYDPLALPILRDISFTTVHGQGVRVPVRIHGSEEIPVRNVTFKDMSVGLTYKKKHIFQ 447
Query: 181 CSNIHGSS-ESVFPEPCPELEN 201
C+ + G +++P PC L+
Sbjct: 448 CAFVQGRVIGTIYPAPCENLDR 469
>gi|224068502|ref|XP_002326133.1| predicted protein [Populus trichocarpa]
gi|222833326|gb|EEE71803.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 122/202 (60%), Gaps = 1/202 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IEDC I++G DAI++KSGWD+YGIAYGRP+T++ IR ++++S + ++ GSEM
Sbjct: 271 SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILIRNLVVRSMVSAGISIGSEM 330
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+SNV VE + ++ S + +T GRGGY++ I + N+ V + HP
Sbjct: 331 SGGVSNVTVENVLVWSSRRAVRIKTAPGRGGYVRHITYRNLTFDNVRVGIVIKTDYNEHP 390
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ +DP A+P + I+F I G + + G QE P N+ ++S+ + + ++
Sbjct: 391 DEGYDPKAVPILGDISFTGIHGQGVRVPVRIHGSQEIPVRNVTFWDMSVGLTYKKKHIFQ 450
Query: 181 CSNIHGSS-ESVFPEPCPELEN 201
C+ + G +VFP PC L+
Sbjct: 451 CAFVQGRVIGTVFPAPCENLDR 472
>gi|116831111|gb|ABK28510.1| unknown [Arabidopsis thaliana]
Length = 478
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 107/200 (53%), Gaps = 1/200 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC + G D I++KSGWD++GI G PT + IRR+ S + +A GSEM
Sbjct: 250 SCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEM 309
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V++E I L + + I +T GRGGY+K I + + F G HP
Sbjct: 310 SGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHP 369
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
FDP A+P I I ++D+ N+T G + PF IC+SNI + L W
Sbjct: 370 ASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLW 429
Query: 180 ECSNIHGSSESVFPEPCPEL 199
C++I G S V P+PC L
Sbjct: 430 NCTSISGVSSKVTPKPCSLL 449
>gi|3738338|gb|AAC63679.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 466
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 107/200 (53%), Gaps = 1/200 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC + G D I++KSGWD++GI G PT + IRR+ S + +A GSEM
Sbjct: 239 SCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEM 298
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V++E I L + + I +T GRGGY+K I + + F G HP
Sbjct: 299 SGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHP 358
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
FDP A+P I I ++D+ N+T G + PF IC+SNI + L W
Sbjct: 359 ASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLW 418
Query: 180 ECSNIHGSSESVFPEPCPEL 199
C++I G S V P+PC L
Sbjct: 419 NCTSISGVSSKVTPKPCSLL 438
>gi|356499323|ref|XP_003518491.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Glycine max]
Length = 445
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D ++ KSGWDEYGI YGRP++D+ IRRV SS + +A GSE
Sbjct: 257 SSSNVCIEDSYISTGDDLVAEKSGWDEYGIVYGRPSSDITIRRVT-GSSPFAGIAIGSET 315
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV E I+LY+ GI +T GR GYIK I +S + G+ G HP
Sbjct: 316 SGGVENVLSEHINLYNMGIGIHIKTNTGRAGYIKNITMSHVYMEEARKGIRISGDVGDHP 375
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SW 179
DD +DP+ALP + +T K++ G + AG G+ PF +IC +I+L G W
Sbjct: 376 DDKYDPNALPLVKGVTIKNVWGVKVLQAGLIQGLSSXPFRDICQYDINLHGVTGPRTPPW 435
Query: 180 ECSNIHG 186
+C+++ G
Sbjct: 436 KCTDVSG 442
>gi|357443839|ref|XP_003592197.1| Endo-polygalacturonase-like protein [Medicago truncatula]
gi|355481245|gb|AES62448.1| Endo-polygalacturonase-like protein [Medicago truncatula]
Length = 475
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 115/200 (57%), Gaps = 1/200 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IED I G D I++KSG D YGI G+P+ + +RR+ S + VA GSEM
Sbjct: 248 SCTNVLIEDNYIVSGDDCIAIKSGLDGYGIKVGKPSQKIIVRRLTCISPKSAMVALGSEM 307
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI ++++E I ++ + + +T GRG Y+K I + L + F G SH
Sbjct: 308 SGGIQDIRIEDITAINTESAVRIKTAVGRGAYVKDIFVKGMNLNTMKYVFWMTGAYKSHA 367
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SW 179
++ FDP ALP I I ++DII N+TIAG GI PF IC+SN+++ ++ N W
Sbjct: 368 ENGFDPKALPKISGINYRDIIAKNVTIAGQLDGISNDPFTGICISNVTIEMSAQKNNLPW 427
Query: 180 ECSNIHGSSESVFPEPCPEL 199
C+++ G + + P+PC L
Sbjct: 428 NCTDVSGVASNAVPKPCDML 447
>gi|225444665|ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
gi|297738532|emb|CBI27777.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 122/202 (60%), Gaps = 1/202 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IEDC I++G D I++KSGWD+YG+AYGRP+ ++ IR ++++S + V+ GSEM
Sbjct: 269 SCEDMVIEDCYISVGDDGIAIKSGWDQYGVAYGRPSVNILIRNLVIRSMVSAGVSIGSEM 328
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+SNV VE + +++S + +T+ GRGGY++ I + N+ V + HP
Sbjct: 329 SGGVSNVTVENLLVWNSRRAVRIKTSPGRGGYVQHINYRNLTFDNVRVGIVIKTDYNEHP 388
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD FDP ALP ++ I+F + G + + G +E P + ++S+ I + ++
Sbjct: 389 DDGFDPKALPILEDISFTGVHGQGVRVPVRIHGSEEIPVKKVTFRDMSVGITYKKKHIFQ 448
Query: 181 CSNIHGSS-ESVFPEPCPELEN 201
C+ + G +VFP PC L+
Sbjct: 449 CAYVEGRVIGTVFPAPCENLDR 470
>gi|147795580|emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
Length = 509
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 122/202 (60%), Gaps = 1/202 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IEDC I++G D I++KSGWD+YG+AYGRP+ ++ IR ++++S + V+ GSEM
Sbjct: 285 SCEDMVIEDCYISVGDDGIAIKSGWDQYGVAYGRPSVNILIRNLVIRSMVSAGVSIGSEM 344
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+SNV VE + +++S + +T+ GRGGY++ I + N+ V + HP
Sbjct: 345 SGGVSNVTVENLLVWNSRRAVRIKTSPGRGGYVQHINYRNLTFDNVRVGIVIKTDYNEHP 404
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD FDP ALP ++ I+F + G + + G +E P + ++S+ I + ++
Sbjct: 405 DDGFDPKALPILEDISFTGVHGQGVRVPVRIHGSEEIPVKKVTFRDMSVGITYKKKHIFQ 464
Query: 181 CSNIHGSS-ESVFPEPCPELEN 201
C+ + G +VFP PC L+
Sbjct: 465 CAYVEGRVIGTVFPAPCENLDR 486
>gi|302823943|ref|XP_002993619.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
gi|300138547|gb|EFJ05311.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
Length = 468
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 123/204 (60%), Gaps = 1/204 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE C I++G D +++KSGWD+YGI YG+P ++ IR + + + + V+ GSEM
Sbjct: 245 SCRNVLIESCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVNAPVSAGVSIGSEM 304
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI+NV VE + +++S G+ +TT GRGGY+ Q+ + + + V + G HP
Sbjct: 305 SGGITNVTVENVFIWNSKRGVRIKTTPGRGGYVTQVFYRNITMETVRVGIVIKTDYGDHP 364
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ +DP ALP +++I F I G+ + I G +E P + + ++++ + + ++
Sbjct: 365 DEFYDPTALPVVEKIFFDGIYGSEVRIPARIYGSKEVPVRGLEIRDMNVGVTRKKKHVFQ 424
Query: 181 CSNIHGSS-ESVFPEPCPELENSS 203
CS + G ++FP+PC +L S+
Sbjct: 425 CSFLQGEVFGTIFPKPCEDLGTST 448
>gi|356558431|ref|XP_003547510.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 489
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IEDC I++G DAI++KSGWD+YGI YGRP+ ++ IR ++++S+ + ++ GSEM
Sbjct: 265 SCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRSNVSAGISIGSEM 324
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+SNV VE I +++S + +T GRGGY++QI + L N+ V + HP
Sbjct: 325 SGGVSNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLMLKNVRVGIVIKTDYNEHP 384
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
+DP ALP + I+F +I G + + G ++ P N+ ++ + I + ++
Sbjct: 385 GAGYDPRALPILRDISFMNIRGQGVRVPVRIQGSEQIPVRNVTFQDMKVGITYKKKHIFQ 444
Query: 181 CSNIHGSS-ESVFPEPC 196
C+ + G + ++FP PC
Sbjct: 445 CAFVQGQAIGTIFPSPC 461
>gi|356565756|ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
Length = 491
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 122/202 (60%), Gaps = 2/202 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IEDC I++G DAI++KSGWD+YGI YGRP+ ++ IR L++S+ + ++ GSEM
Sbjct: 268 SCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMNIMIRN-LVKSTPFAGISIGSEM 326
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+SNV VE + ++DS G+ +T GRG Y++QI + N+ V + HP
Sbjct: 327 SGGVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITYRNITFENVRVGIVMKTDYNEHP 386
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +DP ALP + I+F + G + + G +E P N+ ++S+ + + ++
Sbjct: 387 DDGYDPLALPILRDISFTTVHGQGVRVPVRIHGSEEIPVRNVTFKDMSVGLTYKKKHIFQ 446
Query: 181 CSNIHGSS-ESVFPEPCPELEN 201
C+ + G +++P PC L+
Sbjct: 447 CAFVQGRVIGTIYPAPCENLDR 468
>gi|125583899|gb|EAZ24830.1| hypothetical protein OsJ_08610 [Oryza sativa Japonica Group]
Length = 489
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 128/226 (56%), Gaps = 5/226 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V IE+C I++G DAI++KSGWD+YGIAYGRP+ ++ IR V+ +S + ++ GSEM
Sbjct: 238 SCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEM 297
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI+NV VE + +++S G+ +T GRGGYI+ I + N+ + H
Sbjct: 298 SGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHA 357
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D DA P I I+FK+I G + + G + P +I ++S+ I+ + ++
Sbjct: 358 DDGYDRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSIGISYKKKHIFQ 417
Query: 181 CSNIHGSS-ESVFPEPCPEL----ENSSSNSSSTCFSLIRYYGRAS 221
CS I G SVFP+PC L E + + L Y R+S
Sbjct: 418 CSFIEGRVIGSVFPKPCENLDLYNEQGQLVKRAAMWKLHGYMTRSS 463
>gi|47497401|dbj|BAD19438.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 277
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 121/201 (60%), Gaps = 1/201 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V IE+C I++G DAI++KSGWD+YGIAYGRP+ ++ IR V+ +S + ++ GSEM
Sbjct: 53 SCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEM 112
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI+NV VE + +++S G+ +T GRGGYI+ I + N+ + H
Sbjct: 113 SGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHA 172
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D DA P I I+FK+I G + + G + P +I ++S+ I+ + ++
Sbjct: 173 DDGYDRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSIGISYKKKHIFQ 232
Query: 181 CSNIHGSS-ESVFPEPCPELE 200
CS I G SVFP+PC L+
Sbjct: 233 CSFIEGRVIGSVFPKPCENLD 253
>gi|297600007|ref|NP_001048308.2| Os02g0781000 [Oryza sativa Japonica Group]
gi|255671294|dbj|BAF10222.2| Os02g0781000, partial [Oryza sativa Japonica Group]
Length = 285
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 121/201 (60%), Gaps = 1/201 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V IE+C I++G DAI++KSGWD+YGIAYGRP+ ++ IR V+ +S + ++ GSEM
Sbjct: 61 SCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEM 120
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI+NV VE + +++S G+ +T GRGGYI+ I + N+ + H
Sbjct: 121 SGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHA 180
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D DA P I I+FK+I G + + G + P +I ++S+ I+ + ++
Sbjct: 181 DDGYDRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSIGISYKKKHIFQ 240
Query: 181 CSNIHGSS-ESVFPEPCPELE 200
CS I G SVFP+PC L+
Sbjct: 241 CSFIEGRVIGSVFPKPCENLD 261
>gi|356530447|ref|XP_003533792.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IEDC I++G DAI++KSGWD+YGI YGRP+ ++ IR ++++S+ + ++ GSEM
Sbjct: 270 SCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRSNVSAGISIGSEM 329
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+SNV VE I +++S + +T GRGGY++QI + N+ V + HP
Sbjct: 330 SGGVSNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLMFKNVRVGIVIKTDYNEHP 389
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
+DP ALP + I+F +I G + + G ++ P N+ ++ + I + ++
Sbjct: 390 GTGYDPRALPILRDISFINIRGQGVRVPVRIQGSEQIPVRNVTFQDMKIGITYKKKHIFQ 449
Query: 181 CSNIHGSS-ESVFPEPC 196
C+ + G + ++FP PC
Sbjct: 450 CAFVQGQAIGTIFPSPC 466
>gi|29121121|gb|AAO62947.1| putative polygalacturonase-like protein [Lactuca sativa]
gi|29121352|gb|AAO62948.1| putative polygalacturonase-like protein [Lactuca sativa]
Length = 193
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 113/188 (60%), Gaps = 3/188 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +VCIED I+ G D +++KSGWD+YGI Y RP+ D+ IRR L SS + +A GSE
Sbjct: 7 SSSHVCIEDSYISTGDDLVAVKSGWDQYGIKYARPSNDITIRR-LTGSSPFAGIAIGSET 65
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV E I L + GI +T GRGG I+ I +SD + N+ + G HP
Sbjct: 66 SGGVYNVLAEHITLKNMGIGIHLKTNIGRGGIIRNITVSDVYMVNVRKGIKISADVGDHP 125
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLL--INPGSYNS 178
D +++P+ALP + + K++ G + AG G++ +PF +ICLSNI+L I
Sbjct: 126 DKNYNPNALPVLKHVRIKNVWGKKVQQAGLIHGLKNSPFTDICLSNINLQGPIISTRNVP 185
Query: 179 WECSNIHG 186
W+CS + G
Sbjct: 186 WKCSYVSG 193
>gi|125541363|gb|EAY87758.1| hypothetical protein OsI_09176 [Oryza sativa Indica Group]
Length = 545
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 127/226 (56%), Gaps = 5/226 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V IE+C I++G DAI++KSGWD+YGIAYGRP+ ++ IR V+ +S + ++ GSEM
Sbjct: 294 SCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEM 353
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI+NV VE + +++S G+ +T GRGGYI I + N+ + H
Sbjct: 354 SGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIHDISYRNITFDNVRAGIVIKVDYNEHA 413
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D DA P I I+FK+I G + + G + P +I ++S+ I+ + ++
Sbjct: 414 DDGYDRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSIGISYKKKHIFQ 473
Query: 181 CSNIHGSS-ESVFPEPCPEL----ENSSSNSSSTCFSLIRYYGRAS 221
CS I G SVFP+PC L E + + L Y R+S
Sbjct: 474 CSFIEGRVIGSVFPKPCENLDLYNEQGQLVKRAAMWKLHGYMTRSS 519
>gi|357139453|ref|XP_003571296.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 485
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 119/209 (56%), Gaps = 3/209 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +VCIEDC I G D +++KSGWD+YGI+ +P+T++ I+RV + + S V GSEM
Sbjct: 272 SSSDVCIEDCYIESGDDLVAIKSGWDQYGISVNKPSTNIIIQRVSGTTPTCSGVGIGSEM 331
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S V + +H+++S + + +T GRGG++ + +++ + + V H
Sbjct: 332 SGGVSGVLIRDLHVWNSASAVRIKTDVGRGGFVTNVTVANVTMERVKVPIRFSRGSDDHS 391
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNIS---LLINPGSYN 177
DD +D ALP I + DI+G ++ A + A + IC N+S +
Sbjct: 392 DDKYDRTALPTISDVRIVDIVGVDVQRAPILEAVHGAVYEGICFRNVSLRLREEVRRRHA 451
Query: 178 SWECSNIHGSSESVFPEPCPELENSSSNS 206
W+C +++G + VFPE C EL ++ S+S
Sbjct: 452 GWQCESVYGEAHGVFPEACEELRHNGSSS 480
>gi|326517826|dbj|BAK03831.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520253|dbj|BAK07385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 122/201 (60%), Gaps = 1/201 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S ++V IE+C I++G DAI++KSGWD+YGIAYGR ++++ IR V ++S + ++ GSEM
Sbjct: 271 SCEDVLIENCYISVGDDAIAIKSGWDQYGIAYGRSSSNILIRNVTVRSLVSAGISIGSEM 330
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG++N+ VE +H++DS G+ +T GRGGYI+ I S+ N+ + H
Sbjct: 331 SGGVANITVENVHIWDSRRGVRIKTAIGRGGYIRNISYSNITFDNVRAGIVIKVDYNEHA 390
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D +A P I I+FK I G + + G P +I ++S+ I+ + ++
Sbjct: 391 DDGYDRNAFPDITGISFKKIHGRGVRVPVRAHGSNYIPIKDITFQDMSVGISYKKKHIFQ 450
Query: 181 CSNIHGSS-ESVFPEPCPELE 200
CS I G SVFP+PC L+
Sbjct: 451 CSYIEGRVIGSVFPKPCENLD 471
>gi|376338084|gb|AFB33587.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 95/137 (69%)
Query: 23 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIE 82
SGWDEYGI YGRP++++ IRRV+ Q+ + S +A GSEMSGGI V + + +++S G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 83 FRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIG 142
+T GRGGY++ + IS+ + N++V G G HPDD +DP+ALP I +ITFKDIIG
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPXIQRITFKDIIG 120
Query: 143 TNITIAGNFTGIQEAPF 159
I AG+ GIQ APF
Sbjct: 121 XEIKTAGSVEGIQNAPF 137
>gi|357137810|ref|XP_003570492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 496
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 121/201 (60%), Gaps = 1/201 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V IE+C I++G DAI++KSGWD+YGIAYGRP++++ IR V ++S + ++ GSEM
Sbjct: 272 SCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSSNILIRNVAVRSLVSAGISIGSEM 331
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG++NV VE + ++DS G+ +T GRGGYI+ I + N+ + H
Sbjct: 332 SGGVANVTVENVRIWDSRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYNEHA 391
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D +A P I I+FK+I G + + G P ++ ++S+ I+ + ++
Sbjct: 392 DDGYDRNAFPDITGISFKEIHGWGVRVPVRAHGSNIIPIKDVTFQDMSVGISYKKKHIFQ 451
Query: 181 CSNIHGSS-ESVFPEPCPELE 200
CS I G SVFP+PC L+
Sbjct: 452 CSYIEGRVIGSVFPKPCENLD 472
>gi|255550387|ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
gi|223544730|gb|EEF46246.1| polygalacturonase, putative [Ricinus communis]
Length = 494
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 120/202 (59%), Gaps = 1/202 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IEDC I++G D I++KSGWD+YGIAY RP+T++ IR ++++S + ++ GSEM
Sbjct: 270 SCEDMVIEDCYISVGDDGIAIKSGWDQYGIAYRRPSTNILIRNLVVRSMVSAGISIGSEM 329
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+SN+ VE + ++ S + +T GRGGY++ I + N+ V + HP
Sbjct: 330 SGGVSNITVENLLVWSSRRAVRIKTAPGRGGYVRHITYRNLTFDNVRVGIVIKTDYNEHP 389
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ +DP A+P + I+F + G + + G +E P N+ ++S+ + + ++
Sbjct: 390 DEGYDPKAVPVLRDISFTGVHGQGVRVPVRIHGSEEIPVRNVTFQDMSVGLTYKKKHIFQ 449
Query: 181 CSNIHGSS-ESVFPEPCPELEN 201
C+ + G ++FP PC L+
Sbjct: 450 CAFVQGRVIGTIFPAPCENLDR 471
>gi|376338086|gb|AFB33588.1| hypothetical protein 2_7803_01, partial [Pinus mugo]
Length = 138
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 95/137 (69%)
Query: 23 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIE 82
SGWDEYGI YGRP++++ IRRV+ ++ + S +A GSEMSGGI V + I +++S G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 83 FRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIG 142
+T GRGGY+K + IS+ + N++V G G HPDD +DP+ALP I +ITFKDIIG
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 143 TNITIAGNFTGIQEAPF 159
I AG+ GIQ APF
Sbjct: 121 DEIKTAGSVXGIQNAPF 137
>gi|361068129|gb|AEW08376.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 95/137 (69%)
Query: 23 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIE 82
SGWDEYGI YGRP++++ IRRV+ Q+ + S ++ GSEMSGGI V + I +++S G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLSLGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 83 FRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIG 142
+T GRGGY+K + IS+ + N++V G G HPDD +DP+ALP I +ITFKDIIG
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 143 TNITIAGNFTGIQEAPF 159
I AG+ GIQ APF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|383150861|gb|AFG57437.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150863|gb|AFG57438.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150865|gb|AFG57439.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150867|gb|AFG57440.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150869|gb|AFG57441.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150871|gb|AFG57442.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150873|gb|AFG57443.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150875|gb|AFG57444.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150877|gb|AFG57445.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150879|gb|AFG57446.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150881|gb|AFG57447.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150883|gb|AFG57448.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150885|gb|AFG57449.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150887|gb|AFG57450.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150889|gb|AFG57451.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150891|gb|AFG57452.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150893|gb|AFG57453.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 95/137 (69%)
Query: 23 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIE 82
SGWDEYGI YGRP++++ IRRV+ ++ + S +A GSEMSGGI V + I +++S G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 83 FRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIG 142
+T GRGGY+K + IS+ + N++V G G HPDD +DP+ALP I +ITFKDIIG
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 143 TNITIAGNFTGIQEAPF 159
I AG+ GIQ APF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|297844882|ref|XP_002890322.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336164|gb|EFH66581.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 506
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 119/197 (60%), Gaps = 1/197 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IEDC I+ G DAI++KSGWD++GIAYGRP+T++ IR ++++S + V+ GSEM
Sbjct: 282 SCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSEM 341
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV +E + +++S GI +T GRGGYI+ I + L N+ V + H
Sbjct: 342 SGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEHA 401
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD++D A P + +F I G + + G ++ P N+ ++S+ + + ++
Sbjct: 402 DDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFRDMSVGLTYKKKHIFQ 461
Query: 181 CSNIHGSS-ESVFPEPC 196
CS + G S+FP PC
Sbjct: 462 CSFVKGRVFGSIFPRPC 478
>gi|19698861|gb|AAL91166.1| unknown protein [Arabidopsis thaliana]
gi|23197646|gb|AAN15350.1| unknown protein [Arabidopsis thaliana]
Length = 506
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 119/197 (60%), Gaps = 1/197 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IEDC I+ G DAI++KSGWD++GIAYGRP+T++ IR ++++S + V+ GSEM
Sbjct: 282 SCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSEM 341
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV +E + +++S GI +T GRGGYI+ I + L N+ V + H
Sbjct: 342 SGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEHA 401
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD++D A P + +F I G + + G ++ P N+ ++S+ + + ++
Sbjct: 402 DDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFRDMSVGLTYKKKHIFQ 461
Query: 181 CSNIHGSS-ESVFPEPC 196
CS + G S+FP PC
Sbjct: 462 CSFVKGRVFGSIFPRPC 478
>gi|15221958|ref|NP_173351.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332191692|gb|AEE29813.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 506
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 119/197 (60%), Gaps = 1/197 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IEDC I+ G DAI++KSGWD++GIAYGRP+T++ IR ++++S + V+ GSEM
Sbjct: 282 SCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSEM 341
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV +E + +++S GI +T GRGGYI+ I + L N+ V + H
Sbjct: 342 SGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEHA 401
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD++D A P + +F I G + + G ++ P N+ ++S+ + + ++
Sbjct: 402 DDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFRDMSVGLTYKKKHIFQ 461
Query: 181 CSNIHGSS-ESVFPEPC 196
CS + G S+FP PC
Sbjct: 462 CSFVKGRVFGSIFPRPC 478
>gi|8954055|gb|AAF82228.1|AC069143_4 Contains similarity to a polygalacturonase-like protein gi|7529266
from Arabidopsis thaliana BAC F18P9 gb|AL138654 and
contains multiple polygalacturonase (pectinase) PF|00295
domains [Arabidopsis thaliana]
Length = 533
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 119/197 (60%), Gaps = 1/197 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IEDC I+ G DAI++KSGWD++GIAYGRP+T++ IR ++++S + V+ GSEM
Sbjct: 309 SCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSEM 368
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGISNV +E + +++S GI +T GRGGYI+ I + L N+ V + H
Sbjct: 369 SGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEHA 428
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD++D A P + +F I G + + G ++ P N+ ++S+ + + ++
Sbjct: 429 DDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFRDMSVGLTYKKKHIFQ 488
Query: 181 CSNIHGSS-ESVFPEPC 196
CS + G S+FP PC
Sbjct: 489 CSFVKGRVFGSIFPRPC 505
>gi|224142779|ref|XP_002324728.1| predicted protein [Populus trichocarpa]
gi|222866162|gb|EEF03293.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 121/202 (59%), Gaps = 1/202 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IEDC I++G DAI++KSGWD+YGIAYGRP+T++ IR ++++S + ++ GSEM
Sbjct: 271 SCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILIRNLVVRSMVSAGISIGSEM 330
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+S+V VE + ++ S + +T GRG Y++ I + ++ V + HP
Sbjct: 331 SGGVSSVTVENLLVWSSRRAVRIKTAPGRGAYVRNITYRNLTFDDVRVGIVIKTDYNEHP 390
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D+ +DP A+P + I+F I G + + G +E P N+ ++S+ + + ++
Sbjct: 391 DEGYDPKAVPTLQDISFSGIHGQGVRVPVRIHGSEEIPVRNVTFQDMSVGLTYKKKHIFQ 450
Query: 181 CSNIHGSS-ESVFPEPCPELEN 201
C+ + G ++FP PC L+
Sbjct: 451 CAFVQGRVIGTIFPAPCENLDR 472
>gi|361068131|gb|AEW08377.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|376338080|gb|AFB33585.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 95/137 (69%)
Query: 23 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIE 82
SGWDEYGI YGRP++++ IRRV+ Q+ + S +A GSEMSGGI V + + +++S G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 83 FRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIG 142
+T GRGGY++ + IS+ + N++V G G HPDD +DP+ALP I +ITFKDIIG
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 143 TNITIAGNFTGIQEAPF 159
I AG+ GIQ APF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|388520257|gb|AFK48190.1| unknown [Lotus japonicus]
Length = 482
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IEDC I++G DAI++KSGWD+YGIAYG+P+ ++ IR ++++S+ + ++ GSEM
Sbjct: 258 SCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGKPSKNIIIRNLVVRSNVSAGISIGSEM 317
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+SNV VE + +++S I +T GRGGY++QI + N+ V N HP
Sbjct: 318 SGGVSNVTVENVLVWESRRAIRIKTAPGRGGYMRQITYRNLTFNNVRVGIVIKTNYNEHP 377
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D +DP A P + I+F ++ G + + G +E N+ ++++ I + ++
Sbjct: 378 DAGYDPLAFPVLSDISFINVRGQGVRVPVRIEGSKEISVRNVTFQDMNVGITYKKKHIFQ 437
Query: 181 CSNIHGSS-ESVFPEPC 196
C+ + G ++FP PC
Sbjct: 438 CAFVEGRVIGTIFPAPC 454
>gi|320166922|gb|EFW43821.1| polygalacturonase [Capsaspora owczarzaki ATCC 30864]
Length = 448
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 118/197 (59%), Gaps = 4/197 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S + V I++C+ +G D I++KSGWD GI YG PTTDV IR + + + + +++A GSEM
Sbjct: 249 SCNQVVIQNCVFTVGDDCIAVKSGWDNPGIQYGVPTTDVVIRNMTMHTPTSAAIAIGSEM 308
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+SN+ + I ++ +GI ++ +GRGGY++ + L ++ A G H
Sbjct: 309 SGGVSNLLAQDIRAFNCSSGIRLKSARGRGGYLRNLTFDGVTLNDVKTALSINDFYGQHE 368
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
+DP A+P ID I +I+GT ITI G+F G+ +A N+ +SN+SL ++ GSY
Sbjct: 369 SIFYDPLAVPIIDSIFMSNIVGTAITIPGDFQGLFDAKITNVAISNVSLAVVGSGSY--- 425
Query: 180 ECSNIHGSSESVFPEPC 196
CS G+ +V P C
Sbjct: 426 TCSYATGTQHAVVPVLC 442
>gi|413923569|gb|AFW63501.1| hypothetical protein ZEAMMB73_605801 [Zea mays]
Length = 313
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 117/201 (58%), Gaps = 1/201 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V IE+C I++G DAI++KSGWD+YGIAYGRP++D+ IR V +S + ++ GSEM
Sbjct: 89 SCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTARSLVSAGISIGSEM 148
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG++NV VE + +++S G+ +T GRGGYI+ I + N+ + H
Sbjct: 149 SGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYNEHA 208
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D A P I I+FK I G + + G P +I ++S+ I+ + ++
Sbjct: 209 DDGYDRTAFPDITSISFKGIHGQGVRVPVRAHGSDVIPIKDISFQDMSVGISYKKKHIFQ 268
Query: 181 CSNIHGSS-ESVFPEPCPELE 200
CS + G VFP+PC L+
Sbjct: 269 CSYLEGRVIRPVFPKPCENLD 289
>gi|226492991|ref|NP_001140630.1| uncharacterized protein LOC100272705 [Zea mays]
gi|194700250|gb|ACF84209.1| unknown [Zea mays]
gi|413924334|gb|AFW64266.1| hypothetical protein ZEAMMB73_686606 [Zea mays]
Length = 495
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 117/201 (58%), Gaps = 1/201 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V IE+C I++G DAI++KSGWD+YGIAYGRP++D+ IR V +S + ++ GSEM
Sbjct: 271 SCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTARSLVSAGISIGSEM 330
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG++NV VE + +++S G+ +T GRGGYI+ I + N+ + H
Sbjct: 331 SGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYNEHA 390
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D A P I I+FK I G + + G P +I ++S+ I+ + ++
Sbjct: 391 DDGYDRTAFPDITSISFKGIHGQGVRVPVRAHGSDVIPIKDISFQDMSVGISYKKKHIFQ 450
Query: 181 CSNIHGSS-ESVFPEPCPELE 200
CS + G VFP+PC L+
Sbjct: 451 CSYLEGRVIRPVFPKPCENLD 471
>gi|242063272|ref|XP_002452925.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
gi|241932756|gb|EES05901.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
Length = 500
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 1/201 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V IE+C I++G DAI++KSGWD+YGIAYGRP++++ IR V +S + ++ GSEM
Sbjct: 276 SSQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSNISIRNVNARSLVSAGISIGSEM 335
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG++NV VE + +++S G+ +T GRGGYI+ I + N+ + H
Sbjct: 336 SGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYNEHA 395
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
DD +D A P I I+FK I G + + G P +I ++S+ I+ + ++
Sbjct: 396 DDGYDRTAFPDITSISFKGIHGRGVRVPVRAHGSDVIPIRDISFQDMSVGISYKKKHIFQ 455
Query: 181 CSNIHGS-SESVFPEPCPELE 200
CS + G VFP+PC L+
Sbjct: 456 CSYVEGRVVRPVFPKPCENLD 476
>gi|376338082|gb|AFB33586.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 94/137 (68%)
Query: 23 SGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIE 82
SGWDEYGI YGRP++++ IRRV+ Q+ + S +A GSEMSGGI V + + +++S G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 83 FRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIG 142
+T GRGGY++ + IS+ + N++V G G HPDD +DP+AL I +ITFKDIIG
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALXDIQRITFKDIIG 120
Query: 143 TNITIAGNFTGIQEAPF 159
I AG+ GIQ APF
Sbjct: 121 DEIKTAGSVXGIQNAPF 137
>gi|297818750|ref|XP_002877258.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297323096|gb|EFH53517.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 116/202 (57%), Gaps = 1/202 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IE+ I++G D I++KSGWD+YG YGRP+ ++ IR ++++S + ++ GSEM
Sbjct: 263 SCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGRPSKNILIRNLIIRSMVSAGISIGSEM 322
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+SN+ VE I ++ S G+ +T GRGGY++ I + L + V + HP
Sbjct: 323 SGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGIVIKTDYNEHP 382
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D F+P A P ++ I + I G + + G +E P N+ ++S+ I + ++
Sbjct: 383 DGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRDMSVGITYKKKHIFQ 442
Query: 181 CSNIHGSS-ESVFPEPCPELEN 201
C+ + G ++FP PC L+
Sbjct: 443 CAYVEGRVIGTIFPAPCENLDR 464
>gi|15229188|ref|NP_189881.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|7529266|emb|CAB86682.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|15215709|gb|AAK91400.1| AT3g42950/F18P9_110 [Arabidopsis thaliana]
gi|332644239|gb|AEE77760.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 484
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 116/202 (57%), Gaps = 1/202 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IE+ I++G D I++KSGWD+YG YG+P+ ++ IR ++++S + ++ GSEM
Sbjct: 260 SCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRSMVSAGISIGSEM 319
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+SN+ VE I ++ S G+ +T GRGGY++ I + L + V + HP
Sbjct: 320 SGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGIVIKTDYNEHP 379
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D F+P A P ++ I + I G + + G +E P N+ ++S+ I + ++
Sbjct: 380 DGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRDMSVGITYKKKHIFQ 439
Query: 181 CSNIHGSS-ESVFPEPCPELEN 201
C+ + G ++FP PC L+
Sbjct: 440 CAYVEGRVIGTIFPAPCDNLDR 461
>gi|23506093|gb|AAN28906.1| At3g42950/F18P9_110 [Arabidopsis thaliana]
Length = 484
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 116/202 (57%), Gaps = 1/202 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +++ IE+ I++G D I++KSGWD+YG YG+P+ ++ IR ++++S + ++ GSEM
Sbjct: 260 SCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRSMVSAGISIGSEM 319
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+SN+ VE I ++ S G+ +T GRGGY++ I + L + V + HP
Sbjct: 320 SGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGIVIKTDYNEHP 379
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
D F+P A P ++ I + I G + + G +E P N+ ++S+ I + ++
Sbjct: 380 DGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRDMSVGITYKKKHIFQ 439
Query: 181 CSNIHGSS-ESVFPEPCPELEN 201
C+ + G ++FP PC L+
Sbjct: 440 CAYVEGRVIGTIFPAPCDNLDR 461
>gi|388495020|gb|AFK35576.1| unknown [Lotus japonicus]
Length = 172
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 96/155 (61%), Gaps = 3/155 (1%)
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
MSGG+S V E I+++DS + I +T+ GRGGY++ + IS+ L NI++A G G H
Sbjct: 1 MSGGVSEVHAEDIYIFDSRSAIRIKTSPGRGGYVRNVYISNMTLANIDIAIRFTGLYGEH 60
Query: 120 PDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSW 179
PD+ +DPDALP I++IT KD+IG N+ AG GI+ F NICLSNISL N S W
Sbjct: 61 PDEAYDPDALPLIERITIKDVIGENVKRAGLIQGIKGYDFVNICLSNISL--NVSSKVPW 118
Query: 180 ECSNIHGSSESVFPEPC-PELENSSSNSSSTCFSL 213
CS++ G S+ V PE C P E S C+ L
Sbjct: 119 NCSDVKGYSDLVSPEVCEPLKERIFPEHWSDCYKL 153
>gi|255545182|ref|XP_002513652.1| Exopolygalacturonase precursor, putative [Ricinus communis]
gi|223547560|gb|EEF49055.1| Exopolygalacturonase precursor, putative [Ricinus communis]
Length = 452
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 88/152 (57%), Gaps = 1/152 (0%)
Query: 46 LQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYN 105
L S+S + +A GSEMSGGI NV+VE I + S + + +T GRGGY+K I + L
Sbjct: 265 LISTSDAGIALGSEMSGGIENVRVEDITAFTSQSAVRIKTAPGRGGYVKDIFVRRMTLQT 324
Query: 106 INVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLS 165
+ F GN +HPDD FDP+AL I I ++DI+ N+ ++G F G F IC+S
Sbjct: 325 MKYVFWISGNYKTHPDDGFDPNALAEIKNINYRDIVARNVNMSGAFDGFPTNHFTGICMS 384
Query: 166 NISLLINPGSYN-SWECSNIHGSSESVFPEPC 196
N+++ ++ W CSN+ G S V P PC
Sbjct: 385 NVTIQLSQTPKKPQWNCSNVEGVSSHVTPTPC 416
>gi|109509140|gb|ABG34279.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 201
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 108/199 (54%), Gaps = 7/199 (3%)
Query: 25 WDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFR 84
WDEYGI+Y RP+T++ IR ++++S + ++ GSEMSGG+SNV VE + ++DS + +
Sbjct: 1 WDEYGISYKRPSTNILIRNLVVRSMVSAGISIGSEMSGGVSNVTVENLPVWDSRRAVRIK 60
Query: 85 TTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTN 144
T GRGGY++ I + N+ V + HPD+ +D A P + +I+F + G
Sbjct: 61 TAPGRGGYVQDITYRNITFENVRVGIVIKTDYNEHPDEGYDRKAFPILQRISFIGVHGQG 120
Query: 145 ITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWECSNIHGSS-ESVFPEPCPEL---- 199
+ + G +E P N+ ++S+ + + ++C+ + G S+FP PC L
Sbjct: 121 VRVPVRIHGSEEIPVRNVTFQDMSVGLTYKKKHIFQCAFVQGRVIGSIFPAPCENLDLYD 180
Query: 200 --ENSSSNSSSTCFSLIRY 216
EN S+S + I Y
Sbjct: 181 EQENLVKRSASQNITDIDY 199
>gi|383155085|gb|AFG59707.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 89/138 (64%), Gaps = 1/138 (0%)
Query: 8 EDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNV 67
EDC ++ G D I++KSGWDEYGI++ RP++++ +RR+ + S+ S +A GSEMSGGI ++
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITI-STPFSGIAIGSEMSGGIRDI 59
Query: 68 QVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 127
VE I +Y S GI +T GRGG I+ I S L N+ GN G HPD ++P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 128 ALPAIDQITFKDIIGTNI 145
ALP + I +++G++I
Sbjct: 120 ALPVVGDIAVLNVVGSSI 137
>gi|383155083|gb|AFG59706.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155087|gb|AFG59708.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155089|gb|AFG59709.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155091|gb|AFG59710.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Query: 8 EDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNV 67
EDC ++ G D I++KSGWDEYGI++ RP++++ +RR+ + S+ S +A GSE SGGI ++
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITI-STPFSGIAIGSETSGGIRDI 59
Query: 68 QVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 127
VE I +Y S GI +T GRGG I+ I S L N+ GN G HPD ++P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 128 ALPAIDQITFKDIIGTNI 145
ALP + I D++G++I
Sbjct: 120 ALPVVGDIAVLDVVGSSI 137
>gi|383155065|gb|AFG59697.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155069|gb|AFG59699.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155073|gb|AFG59701.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155075|gb|AFG59702.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155077|gb|AFG59703.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155079|gb|AFG59704.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155081|gb|AFG59705.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155093|gb|AFG59711.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155095|gb|AFG59712.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155097|gb|AFG59713.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Query: 8 EDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNV 67
EDC ++ G D I++KSGWDEYGI++ RP++++ +RR+ + S+ S +A GSE SGGI ++
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITI-STPFSGIAIGSETSGGIRDI 59
Query: 68 QVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 127
VE I +Y S GI +T GRGG I+ I S L N+ GN G HPD ++P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 128 ALPAIDQITFKDIIGTNI 145
ALP + I +++G++I
Sbjct: 120 ALPVVGDIAVLNVVGSSI 137
>gi|361067449|gb|AEW08036.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155067|gb|AFG59698.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155071|gb|AFG59700.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Query: 8 EDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNV 67
EDC ++ G D I++KSGWDEYGI++ RP++++ +RR+ + S+ S +A GSE SGGI ++
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITI-STPFSGIAIGSETSGGIRDI 59
Query: 68 QVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPDDDFDPD 127
VE I +Y S GI +T GRGG I+ I S L N+ GN G HPD ++P
Sbjct: 60 LVENISIYSSSVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 128 ALPAIDQITFKDIIGTNI 145
ALP + I +++G++I
Sbjct: 120 ALPVVGDIAVLNVVGSSI 137
>gi|359490607|ref|XP_003634121.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Vitis vinifera]
Length = 492
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N+ +EDC I G D+I++KS +E G+ G PT + IRR+ S + +A G EM
Sbjct: 230 SCTNIRVEDCYIVSGDDSIAVKSALNENGVKCGMPTEGLIIRRLTCISPHSAVIALGREM 289
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
+G + NV+ E I D GI +T RGGY+K I + + + AF G+ G P
Sbjct: 290 AGXM-NVRAEDITAIDXQFGIRIKTGLERGGYVKDIYVRRMTMKTMRFAFWIIGDYGPPP 348
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
+ P I+ I ++D++ N+T GI PF C+SN+++ L W
Sbjct: 349 APGHEG---PVIEGINYRDMVADNVTYPAQLHGISGGPFTGFCISNVTIGLTEESRKQQW 405
Query: 180 ECSNIHGSSESVFPEPCPELENSS 203
+C + G + V P+PC L S
Sbjct: 406 DCDEVQGITSRVTPQPCDLLSPSK 429
>gi|297742230|emb|CBI34379.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 96/211 (45%), Gaps = 48/211 (22%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D I++KSGWDEYGIAYG PT + IRR+ S +++A GSEM
Sbjct: 246 SCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSATIALGSEM 305
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI +V+ E I D+ +G+ +T
Sbjct: 306 SGGIEDVRAEDILAIDTESGVRIKTAG--------------------------------- 332
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
I ++D++ N+T+AG GI PF IC+SN+++ L W
Sbjct: 333 --------------INYRDMVAENVTMAGRLEGISGDPFTGICISNVTIGLAKKAKKAPW 378
Query: 180 ECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
C++I G + V P+PC L + C
Sbjct: 379 TCTDIAGITSGVVPQPCDLLPDQGPEKIVAC 409
>gi|194695268|gb|ACF81718.1| unknown [Zea mays]
Length = 120
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 81/115 (70%), Gaps = 2/115 (1%)
Query: 103 LYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 162
+ N++V GNC +HPDD FDP LPAID +T K++ GTNI++AG +GI+ APF I
Sbjct: 1 MENVHVGIEFTGNCSTHPDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAI 60
Query: 163 CLSNISLLINPGS-YNSWECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRY 216
CLSN++ + GS +SW CS++ G SE+VFPEPC EL + SS SSS C+SL Y
Sbjct: 61 CLSNLNFSMAAGSGPSSWSCSDVSGYSEAVFPEPCTELRDPSS-SSSVCYSLASY 114
>gi|297816102|ref|XP_002875934.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
gi|297321772|gb|EFH52193.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
Length = 443
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 1/179 (0%)
Query: 33 GRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGY 92
GRP + IRR + +G+ +A GSEMSGGI V++E + L+++ + I+ T GRGGY
Sbjct: 243 GRPIEMLLIRRFSCIAPNGAGIAMGSEMSGGIKGVRMEDVTLHNTQSAIKIETAMGRGGY 302
Query: 93 IKQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFT 152
++ + + F G+ P D P A P + I F+DI G N++ +
Sbjct: 303 VQNVWARRFTIKTSKYVFLMTGSHKPIPRDGNIPKAKPVVTNINFRDITGENVSTSAKLE 362
Query: 153 GIQEAPFANICLSNISLLINP-GSYNSWECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
G++ PF +C+SN+S+ ++P S + C +I G S SV P+PC L + C
Sbjct: 363 GMKSNPFTGVCMSNVSISLSPNASKQQFHCMDIVGESRSVKPQPCSLLPDKHPGVRFEC 421
>gi|388497356|gb|AFK36744.1| unknown [Lotus japonicus]
Length = 177
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 2/153 (1%)
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
MSGGI +V+ E I + +GI +T GRGGY K I + ++ + F GN GSH
Sbjct: 1 MSGGIQDVRAEDITAIHTESGIRIKTAVGRGGYGKDIYVQRMTMHTMKWTFWMTGNYGSH 60
Query: 120 PDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS- 178
D ++DP+ALP I I ++D++ +T+AGN GI F IC++N+++ + S
Sbjct: 61 ADKNYDPNALPEIKGINYRDMVADEVTMAGNLEGISNDQFTGICIANVTISMAAKSKKQP 120
Query: 179 WECSNIHGSSESVFPEPCPELENSSSNS-SSTC 210
W CS++ G + V P+PC L + ++TC
Sbjct: 121 WTCSDVEGITSGVTPKPCNLLPDQGPEKITTTC 153
>gi|91806548|gb|ABE66001.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
Length = 416
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 90/209 (43%), Gaps = 57/209 (27%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IEDC I G D I++KSGWD+YGI
Sbjct: 239 SCTNTLIEDCYIVSGDDCIAVKSGWDQYGI------------------------------ 268
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
+T GRG Y+K I + + F GN GSHP
Sbjct: 269 -----------------------KTAVGRGAYVKDIYARRITMKTMKYVFWMSGNYGSHP 305
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSW 179
D+ FDP ALP I I ++D+ N+T++ + GI + PF IC+SN+++ L W
Sbjct: 306 DEGFDPKALPEITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVTIALAAKAKKMQW 365
Query: 180 ECSNIHGSSESVFPEPC---PELENSSSN 205
C+++ G + V PEPC PE + + N
Sbjct: 366 NCTDVAGVTSRVTPEPCSLLPEKKAQAKN 394
>gi|167523647|ref|XP_001746160.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775431|gb|EDQ89055.1| predicted protein [Monosiga brevicollis MX1]
Length = 464
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 6/200 (3%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S+ +V I DC + G D++++KSGWD YG + ++ I + S + + + GSEM
Sbjct: 264 STRDVVIRDCYFSTGDDSVAIKSGWDVYGYTVNISSNNITIENCVFHSPNAAGICLGSEM 323
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYN-INVAFGACGNCGSH 119
SGGI+NV I + L G +T GRGGY+ + + D + N I +A G G+ G H
Sbjct: 324 SGGIANVFARNITMTGCLQGFRIKTGMGRGGYVVNVTVEDVVIENSIQLAVGYNGHYGGH 383
Query: 120 PDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSW 179
P ++P A P + I+ + G N T G+ + F + N+ + G W
Sbjct: 384 P-AGYNPLATPHVYNISLINARGGNNTQIAELVGLPNSQFRALRFQNVHITGKQG----W 438
Query: 180 ECSNIHGSSESVFPEPCPEL 199
CS+I G++++V P CP L
Sbjct: 439 TCSDISGTAQNVTPAACPSL 458
>gi|129771144|gb|ABO31369.1| polygalacturonase [Gossypium hirsutum]
Length = 219
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NVCIED I+ G D +++KSGWDEYGI YGRP++ + IRRV SS + +A GSE
Sbjct: 101 SSSNVCIEDSFISTGDDLVAVKSGWDEYGIGYGRPSSHITIRRV-TGSSPFAGIAVGSET 159
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ +V E I +Y+S G+ +T GRGG+IK I +S + N+ SHP
Sbjct: 160 SGGVEHVLAENIVIYNSGIGVNIKTNIGRGGFIKNITVSPVFMENVRTGI----KIASHP 215
>gi|255641037|gb|ACU20798.1| unknown [Glycine max]
Length = 186
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 62/70 (88%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS++VCI++C I+ GHDAI LKSGWDEYG+AYG+PT++VHIR V LQSSSG+ +AFGSEM
Sbjct: 117 SSEHVCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRGVYLQSSSGAGLAFGSEM 176
Query: 61 SGGISNVQVE 70
SGGIS++ E
Sbjct: 177 SGGISDIIAE 186
>gi|219120807|ref|XP_002185635.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582484|gb|ACI65105.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 451
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 112/236 (47%), Gaps = 34/236 (14%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IED G D +++KSGWD +GI Y P+ ++ IR V Q + +A G+EM
Sbjct: 211 SSRNVLIEDSTYRGGDDCVAIKSGWDCFGIDYDTPSENITIRNVTCQGPY-AGIAIGTEM 269
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISD------------AELYNI-N 107
SGG+ NV VE + + +T RGGY+ +V + ++Y+ N
Sbjct: 270 SGGVRNVTVENVTFTYANKPANIKTGNTRGGYVHDVVYQNIRITGHIDQAIHVDMYHYHN 329
Query: 108 VAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAG----NFTGIQEAPFANIC 163
+C N ++ P+ LP + + F + GT +F G+ E+P +
Sbjct: 330 TPNPSCSN-------NYQPNQLPHLRDLYFFNFEGTQALTESHEVFHFVGLPESPIEYVF 382
Query: 164 LSNISLLINPGSYNSWECSNIHGS--SESVFP-EPCPE-----LENSSSNSSSTCF 211
L NIS P S W CSN+ GS + SV P PCPE +ENS + S F
Sbjct: 383 LENISFPT-PVSSLGWNCSNVQGSVKNNSVTPWPPCPEFPSVTVENSETMSPWNAF 437
>gi|223949035|gb|ACN28601.1| unknown [Zea mays]
Length = 376
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 77/128 (60%), Gaps = 6/128 (4%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N+CIED I++ H+AISLKSGWD YGI++GRPT+D+ I RV L SSSG+++AFGSEM
Sbjct: 237 SCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISRVDLLSSSGAALAFGSEM 296
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGIS++ V + ++DS G G + +++ + E C +H
Sbjct: 297 SGGISDIHVNHLRIHDSSKGPPEEVLVGIAEELLGVLVEEGE------PEAEAQECPNHR 350
Query: 121 DDDFDPDA 128
F+ D
Sbjct: 351 PSSFEKDG 358
>gi|367067221|gb|AEX12820.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067223|gb|AEX12821.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067225|gb|AEX12822.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067227|gb|AEX12823.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067229|gb|AEX12824.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067231|gb|AEX12825.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067233|gb|AEX12826.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067235|gb|AEX12827.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067237|gb|AEX12828.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067239|gb|AEX12829.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067241|gb|AEX12830.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067243|gb|AEX12831.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067245|gb|AEX12832.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067247|gb|AEX12833.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067249|gb|AEX12834.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067251|gb|AEX12835.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067253|gb|AEX12836.1| hypothetical protein 2_9627_01 [Pinus taeda]
Length = 131
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Query: 105 NINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICL 164
N+ AF G+ GSHPD+ ++PDALP +++I++ +I+ TN+++AG GI +APF +ICL
Sbjct: 2 NMKWAFTMTGSYGSHPDNKYNPDALPVVERISYSNIVATNVSVAGKLEGIAKAPFKDICL 61
Query: 165 SNISLLINPGSYN-SWECSNIHGSSESVFPEPCPELENSSSNSSSTC 210
SN+++ + + W C+ IHG S +V+P+PC LE + + C
Sbjct: 62 SNVTITMAAKAKKYPWNCTYIHGLSNTVYPQPCSLLEEKPAEGDAFC 108
>gi|194696678|gb|ACF82423.1| unknown [Zea mays]
Length = 335
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 63/77 (81%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N+CIED I++ H+AISLKSGWD YGI++GRPT+D+ I RV L SSSG+++AFGSEM
Sbjct: 237 SCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISRVDLLSSSGAALAFGSEM 296
Query: 61 SGGISNVQVEKIHLYDS 77
SGGIS++ V + ++DS
Sbjct: 297 SGGISDIHVNHLRIHDS 313
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Query: 64 ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPDDD 123
+++V + ++ L ++ + I +T GRGGYIK I + + F G+ HP
Sbjct: 947 LTDVVITEVTLINTQSAIRIKTAIGRGGYIKDIFARRFTMKTMKYVFWMTGSYKLHPVGG 1006
Query: 124 FDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN-SWECS 182
FDP ALP I I ++D+ N+TI+ I+ PF +C+S++++ ++P W C+
Sbjct: 1007 FDPKALPEISNIHYRDMTAENVTISAKLERIKNGPFTGLCMSSVTIALSPDPKKLQWNCT 1066
Query: 183 NIHGSSESVFPEPCPELENSSSNSSSTC 210
++ G + V PEPC L + + S C
Sbjct: 1067 DVSGVTSRVTPEPCSLLPDKRTTMDSDC 1094
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 5/154 (3%)
Query: 52 SSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFG 111
+S+ +GS ++ +V + + L ++ + I +T GRGGY+K I + + F
Sbjct: 940 TSLIYGSNLT----DVVITDVTLINTQSAIRIKTAVGRGGYVKNIFARRFTMKTMKYVFW 995
Query: 112 ACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLI 171
G+ HP FDP ALP I I ++D+ N+TI+ GI+ PF +C+SN+++ +
Sbjct: 996 MTGSYKLHPVGGFDPKALPEISNINYRDMTAENVTISAKLEGIKNDPFTGLCMSNVTIAL 1055
Query: 172 NPGSYN-SWECSNIHGSSESVFPEPCPELENSSS 204
+P W C+++ G + V PEPC L + +
Sbjct: 1056 SPDPKKLQWNCTDVSGVTSRVKPEPCSLLPDKGT 1089
>gi|302143796|emb|CBI22657.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 60/93 (64%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S V IEDC I G D I++KSGWD+YG +G PT D+ IRR+ S +++A GSEM
Sbjct: 245 SCKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISPDSATIALGSEM 304
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYI 93
SGGI NV E I D+ +GI +T GRGGYI
Sbjct: 305 SGGIKNVWAEDITAIDTQSGIRIKTGIGRGGYI 337
>gi|297827255|ref|XP_002881510.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297327349|gb|EFH57769.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 153
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Query: 83 FRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDIIG 142
+T GRGGY+K + + + + F G+ GSHPD+ +DP ALP I I ++D++
Sbjct: 1 IKTAIGRGGYVKDVYVRGMTMNTMKYVFWMTGSYGSHPDEHYDPKALPVIQNINYQDMVA 60
Query: 143 TNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS-WECSNIHGSSESVFPEPCPELEN 201
N+T+ GI F IC+SN+++ ++ W C+++ G + V P+PC L
Sbjct: 61 ENVTMPAQLAGISGDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPE 120
Query: 202 SSSNSSSTC 210
+ C
Sbjct: 121 KQPGTIVPC 129
>gi|399889206|ref|ZP_10775083.1| glycoside hydrolase family protein [Clostridium arbusti SL206]
Length = 756
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 8/182 (4%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S DN+ + + +G D I++KSG D G G P++++ IR L+ G V GSEM
Sbjct: 379 SVDNLLVVNTTFDVGDDCIAIKSGKDAEGRKIGIPSSNITIRNSLMLHGHGG-VTLGSEM 437
Query: 61 SGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIKQIVISDAELYNINV-AFGACGNCGS 118
SGGI+N+ + K ++DS N G+ +T +GRGG I+ +V + + NI+ AF N S
Sbjct: 438 SGGINNINI-KDDIFDSTNIGVRLKTLRGRGGVIQDVVFDNIMMKNISSDAFNINSNYSS 496
Query: 119 H----PDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPG 174
+ P + P I + FK+I A F G+QE P + LSNI++ + G
Sbjct: 497 NGAPLPYTGVVDETTPTIKNLVFKNITAIGAKEASFFQGLQEMPVDGVTLSNINVTADKG 556
Query: 175 SY 176
+
Sbjct: 557 LF 558
>gi|448413184|ref|ZP_21577030.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
gi|445667365|gb|ELZ20009.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
Length = 515
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 3/171 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V I DC + G DA+ +KSG DE G GRP + + + +++ G V GSEM
Sbjct: 216 SSRYVRISDCYLNAGDDAVCIKSGKDEEGRRIGRPASGITVTNCTVEAGHG-GVVIGSEM 274
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + +V V D+ GI +T +GRGG ++ + + + F G
Sbjct: 275 SGDVRDVTVSNCTFTDTDRGIRIKTQRGRGGVVEDCRFDNLVMRRVACPFTINGYYFMDI 334
Query: 121 DDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
D D P ++ P + I + DII ++ AG F G+ E F NI SN+ +
Sbjct: 335 DSDPIPVDESTPMVRNIAYSDIIARDVETAGFFAGLPEQRFENISFSNVEI 385
>gi|317474355|ref|ZP_07933629.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909036|gb|EFV30716.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 477
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 90/177 (50%), Gaps = 10/177 (5%)
Query: 3 DNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSG 62
+ V I +C I G D I+LKSG++E+G G P ++ I S+V GSEMSG
Sbjct: 215 NGVRISNCYIDCGDDCITLKSGYNEHGRKKGIPCENIVISNCTFAHGR-SAVGIGSEMSG 273
Query: 63 GISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYN----INVAFGACGNCGS 118
GI NV V +L G+ +T +GRGG ++ I S + N I++ G G G
Sbjct: 274 GIKNVTVMNCVFKGTLRGLRVKTGRGRGGTVENIFASGIIMENLREGISIDMGYEGVSGK 333
Query: 119 -HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPG 174
+P ++ P I FKDIIGTN+ A N G+ EAP I L +I ++ G
Sbjct: 334 IYPVT----ESTPFFKNIRFKDIIGTNVEQAINIIGLAEAPPQFIVLEDIRMVCKRG 386
>gi|307718144|ref|YP_003873676.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
gi|306531869|gb|ADN01403.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
Length = 462
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IEDC +G D + LKSG DE G GRPT V IR +++ G V GSE+
Sbjct: 220 SSRNVRIEDCTFDVGDDCLGLKSGIDEDGRRVGRPTEHVVIRGCIMRRGHGGIVC-GSEI 278
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF--GACGNCGS 118
+GG+ NV V D+ GI ++ +GRGG+++ ++I + + V CG
Sbjct: 279 AGGVRNVVVTGCIFQDTDRGIRIKSRRGRGGFVENVMIHQIVMERVLVPLVVNLYYRCGI 338
Query: 119 HPDDD--------FDP----DALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLS 165
P ++ P + PA+ I+ ++ T + + AG G+ E P + LS
Sbjct: 339 DPGEEEIVSRLASLLPLPVDETTPAVRNISISQVLATGVKSSAGFLLGLPERPIEGLVLS 398
Query: 166 NISLLIN 172
+ + ++
Sbjct: 399 DYRVFMD 405
>gi|386346149|ref|YP_006044398.1| glycoside hydrolase family protein [Spirochaeta thermophila DSM
6578]
gi|339411116|gb|AEJ60681.1| glycoside hydrolase family 28 [Spirochaeta thermophila DSM 6578]
Length = 462
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 91/187 (48%), Gaps = 16/187 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IEDC +G D + LKSG DE G GRPT V IR +++ G V GSE+
Sbjct: 220 SSRNVRIEDCTFDVGDDCLGLKSGIDEDGRRVGRPTEHVVIRGCIMRRGHGGIVC-GSEI 278
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF--GACGNCGS 118
+GG+ NV V D+ GI ++ +GRGG+++ +++ + + V CG
Sbjct: 279 AGGVRNVVVTGCIFQDTDRGIRIKSRRGRGGFVENVMVHQIVMERVLVPLVVNLYYRCGI 338
Query: 119 HPDDDFDPDAL------------PAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLS 165
P ++ L PA+ I+ + T + + AG G+ E P + LS
Sbjct: 339 DPGEEETISRLASLLPLPVDETTPAVRNISISQVFATGVKSSAGFLLGLPERPIEGLMLS 398
Query: 166 NISLLIN 172
+ ++++
Sbjct: 399 DYRVVMD 405
>gi|393781486|ref|ZP_10369681.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
gi|392676549|gb|EIY69981.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
Length = 501
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 91/188 (48%), Gaps = 7/188 (3%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G YG+P ++ I ++ S G V GSEM
Sbjct: 251 SCSNVRISDCFISVGDDCITIKSGRDADGRKYGKPCQNLTITNCIMLSGHG-GVVIGSEM 309
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN---VAFGACGNCG 117
SGG+ V + + GI + ++GRGG ++ I + + + NI F +
Sbjct: 310 SGGVKRVAISNCVFDGTDAGIRLKASRGRGGVVEDIRVDNIVMKNIGRNAFIFDLFYDKL 369
Query: 118 SHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN 177
S P+ + P I +I G+++ G GI+E P + SNI++ G +N
Sbjct: 370 SKPEP--VSERTPVFRNIHLSNITGSDVKQIGYIKGIEEMPINELSFSNINMEAEKG-FN 426
Query: 178 SWECSNIH 185
+NI
Sbjct: 427 VETATNIR 434
>gi|116620373|ref|YP_822529.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223535|gb|ABJ82244.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 446
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 85/177 (48%), Gaps = 4/177 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I + I +G D ++LKSG DE G GRP ++ I ++ G+ V GSEM
Sbjct: 223 SCRNVQILNSRIDVGDDCVTLKSGKDEAGRRVGRPDENITITNCVMLKGHGA-VTIGSEM 281
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACG-NCGSH 119
SGG+ NV V + GI ++ +GRGG ++ V+S+ + ++ AF G+
Sbjct: 282 SGGVRNVVVSNCVFQGTDVGIRVKSQRGRGGIVEGFVVSNVVMQDVASAFTLTSFYAGTD 341
Query: 120 PDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPG 174
D P + P + F +I AG TG++E P NI + + + G
Sbjct: 342 KPGDLFPVGEGTPRLRDFRFSNITARGSKTAGQITGLKEMPIENITFTGVRIQAETG 398
>gi|395803596|ref|ZP_10482840.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434150|gb|EJG00100.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 522
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 85/174 (48%), Gaps = 10/174 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G YG+ T +V I + S G V GSEM
Sbjct: 240 SCTNVHISDCHISVGDDCITIKSGRDGDGRKYGKATENVTITNCTMLSGHG-GVVIGSEM 298
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN---VAFGACGNCG 117
SGGI + + + GI ++ +GRGG ++ I + + + NI + + G
Sbjct: 299 SGGIKKITISNCVFDGTDRGIRIKSARGRGGVVEDIRVDNIVMKNIKEEAIVLSLFYDKG 358
Query: 118 SHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ +P + P I +I +N+ AG GI E P NI SNI++
Sbjct: 359 T----TVEPVTEKTPIFRNIHMSNITASNVNKAGQILGITEMPIQNITFSNINM 408
>gi|374316328|ref|YP_005062756.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
gi|359351972|gb|AEV29746.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
Length = 454
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 18/182 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +NV IE C+I +G D I+LKSG GI GRPT DV I + ++++ G +V GSE
Sbjct: 219 SCENVTIEGCVIDVGDDGIALKSGSGPDGILTGRPTKDVRIFQCTVRNAHGGAV-IGSET 277
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQI------VISDAELYNINVAFGACG 114
+ GI NV+V + GI +T +GRGG I + ++ + IN+ +
Sbjct: 278 AAGIHNVEVSNCLFDGTDRGIRIKTRRGRGGKISHLSFLGLKMVKNLCPLTINLYY---- 333
Query: 115 NCGSHPDDDFDPDALPAIDQI-TFKDIIGTNITIAGNFT------GIQEAPFANICLSNI 167
CGS ++DF + LP + + DI T+ G + G+ E+P +C+ +
Sbjct: 334 RCGSFSNEDFSLEKLPVCPETPSVSDIRITDCEAVGCLSSIAFIVGLPESPITGLCIEDC 393
Query: 168 SL 169
+
Sbjct: 394 TF 395
>gi|291538883|emb|CBL11994.1| Endopolygalacturonase [Roseburia intestinalis XB6B4]
Length = 518
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 20/192 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I ++G D I++KSG G Y P+ ++HIR+ L+++ G+ V GSEM
Sbjct: 280 SCKNVDIVGVKFSLGDDCIAVKSGKIYMGKKYRTPSENIHIRQCLMENGHGA-VTVGSEM 338
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGACGNCGS 118
+GG+ N+ VE+ YD+ G+ +T +GRG + QI+ ++ + F NC
Sbjct: 339 AGGVKNLVVEECRFYDTDRGLRIKTRRGRGKDAVLDQIIFRKIDMDQVMTPF--VINCFY 396
Query: 119 HPDDDFDP------------DALPAIDQITFKDIIGTNITIAGN-FTGIQEAPFANICLS 165
D D D PAI ++ F+DI N +A F G+ E I +
Sbjct: 397 FCDPDGKTEFVQSREKMPVDDGTPAILRLDFEDIKAQNCHVAAAYFDGLPEQKIEQIIMK 456
Query: 166 NISLLI--NPGS 175
NI++ NP S
Sbjct: 457 NITVTYAKNPKS 468
>gi|240144096|ref|ZP_04742697.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|257203884|gb|EEV02169.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|291536249|emb|CBL09361.1| Endopolygalacturonase [Roseburia intestinalis M50/1]
Length = 518
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 20/192 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I ++G D I++KSG G Y P+ ++HIR+ L+++ G+ V GSEM
Sbjct: 280 SCKNVDIVGVKFSLGDDCIAVKSGKIYMGKKYRTPSENIHIRQCLMENGHGA-VTVGSEM 338
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGACGNCGS 118
+GG+ N+ VE+ YD+ G+ +T +GRG + QI+ ++ + F NC
Sbjct: 339 AGGVKNLVVEECRFYDTDRGLRIKTRRGRGKDAVLDQIIFRKIDMDQVMTPF--VINCFY 396
Query: 119 HPDDDFDP------------DALPAIDQITFKDIIGTNITIAGN-FTGIQEAPFANICLS 165
D D D PAI ++ F+DI N +A F G+ E I +
Sbjct: 397 FCDPDGKTEFVQSREKMPVDDGTPAILRLDFEDIKAQNCHVAAAYFDGLPEQKIEQIIMK 456
Query: 166 NISLLI--NPGS 175
NI++ NP S
Sbjct: 457 NITVTYAKNPKS 468
>gi|146301824|ref|YP_001196415.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156242|gb|ABQ07096.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 522
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 85/174 (48%), Gaps = 10/174 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C I++G D I++KSG D G YG+ T +V I + S G V GSEM
Sbjct: 240 SCTNVHISNCHISVGDDCITIKSGRDGDGRKYGKATENVTITNCTMLSGHGG-VVIGSEM 298
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN---VAFGACGNCG 117
SGGI + + + GI ++ +GRGG ++ I + + + NI + + G
Sbjct: 299 SGGIKKITISNCVFDGTDRGIRIKSARGRGGVVEDIRVDNIVMKNIKEEAIVLSLFYDKG 358
Query: 118 SHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ +P + P I +I +N+ AG GI E P NI SNI++
Sbjct: 359 TQ----VEPVTEKTPIFRNIHMSNITASNVNKAGQILGITEMPIQNITFSNINM 408
>gi|390944044|ref|YP_006407805.1| endopolygalacturonase [Belliella baltica DSM 15883]
gi|390417472|gb|AFL85050.1| endopolygalacturonase [Belliella baltica DSM 15883]
Length = 570
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I D I +G DAI KSG D+ G G PT +V ++ ++ G V GSEM
Sbjct: 296 SCKNVLIYDNIFDVGDDAICFKSGKDQDGRDRGMPTENVVVKNNIVYHGHGGFV-IGSEM 354
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ NV + + G+ F++T+GRGG ++ I IS+ ++ NI N+ +G
Sbjct: 355 SGGVRNVHISDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDMINIPTDVINFNLFYG-- 412
Query: 114 GNC------GSHPDDDFDPDALPAIDQI-TFKDIIGTNIT-----IAGNFTGIQEAPFAN 161
GN S D+ D A+P + +FK+I NI +A NF G+ E N
Sbjct: 413 GNSPVLEADQSAEDEARDEVAVPVSETTPSFKNIFMKNIKATGSGVAANFQGLPEMNLQN 472
Query: 162 ICLSN 166
+ L +
Sbjct: 473 VSLED 477
>gi|147772320|emb|CAN69072.1| hypothetical protein VITISV_012807 [Vitis vinifera]
Length = 111
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 114 GNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL--LI 171
G+ G HPDD+F+P+ALP + + +D+ G ++ G+ G++ +PF ICLS I+L I
Sbjct: 12 GDVGDHPDDNFNPNALPVVKGVVIRDVWGLDVLQPGSIIGLKNSPFTGICLSKINLHGKI 71
Query: 172 NPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSSTCF 211
PG+ W+CS++ G++ V P PC EL + S + F
Sbjct: 72 KPGTA-PWKCSDVSGAAVGVSPWPCSELTSPGQTGSCSXF 110
>gi|339499261|ref|YP_004697296.1| polygalacturonase [Spirochaeta caldaria DSM 7334]
gi|338833610|gb|AEJ18788.1| Polygalacturonase [Spirochaeta caldaria DSM 7334]
Length = 467
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 12/183 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S ++ I++C +G D + LKSG E GI RPT ++ I +++ G V GSE
Sbjct: 222 SCSSITIQNCTFDVGDDCLGLKSGSGEDGIRINRPTENILIDSCTMKNGHGG-VVIGSET 280
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI------NVAFGACG 114
+GGI+N+++ + ++ G+ +T +GRGG I+ I + + NI N +G G
Sbjct: 281 AGGINNIKITNCSMEETDRGLRIKTRRGRGGVIENIRLEHCYMKNILCPLVVNCYYGPGG 340
Query: 115 NCGSHPDDDFDPDAL----PAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSNISL 169
S P DP L P I I +I + A F G+ E P N+ +S
Sbjct: 341 PKSSSPIFSLDPQPLSATTPKIQNIYISHLIAEHCRAAAAFIVGLPEQPIKNLYISECKF 400
Query: 170 LIN 172
+++
Sbjct: 401 ILD 403
>gi|399031128|ref|ZP_10731267.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070597|gb|EJL61889.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 524
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C I++G D I++KSG D G YG+ T +V I + S G V GSEM
Sbjct: 242 SCTNVHISNCHISVGDDCITIKSGRDADGRKYGKATENVTITNCTMLSGHG-GVVIGSEM 300
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI + + + GI + +GRGG ++ I + + + NI +
Sbjct: 301 SGGIKKITISNCVFDGTDRGIRIKAARGRGGVVEDIRVDNIVMKNIKEE-AIILDLFYDK 359
Query: 121 DDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
D+ +P + P I ++ G N+ AG GI E P NI SNI++
Sbjct: 360 DNPVEPVTERTPIFRNIHISNVTGGNVNKAGFVRGIVEMPIQNITFSNINM 410
>gi|423214932|ref|ZP_17201460.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692195|gb|EIY85433.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
Length = 472
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 91/199 (45%), Gaps = 5/199 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE C + G DAI++KSG D G+PT +V IR S + V GSE+
Sbjct: 265 SCSNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENVVIRNCTFWSKI-NGVCIGSEI 323
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV +E I + S N I F++ RGGYI+ I + + + ++ A
Sbjct: 324 SGGVRNVFIENISILKSSNAIYFKSNLDRGGYIENIYVRNIQADSVRTALVRVEPNYKGE 383
Query: 121 DDDFDPDALPAIDQITFKDII-GTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSW 179
F P ++IT +++ G A + G E P NI L NI++ Y
Sbjct: 384 RSGFHPTLF---NKITVENVTCGQTNECAISMAGFPELPIRNITLKNITVDKAVSDYRLE 440
Query: 180 ECSNIHGSSESVFPEPCPE 198
NI + V E PE
Sbjct: 441 HGENIIFENVRVNGEKLPE 459
>gi|325972835|ref|YP_004249026.1| polygalacturonase [Sphaerochaeta globus str. Buddy]
gi|324028073|gb|ADY14832.1| Polygalacturonase [Sphaerochaeta globus str. Buddy]
Length = 453
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 14/200 (7%)
Query: 5 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGI 64
V I+ C++ +G D I+LKSG G+A +PTTD+ I ++S+ G +V GSE + GI
Sbjct: 223 VTIKKCLVDVGDDGIALKSGSGPDGVATNKPTTDILIEECTVKSAHGGAV-IGSETAAGI 281
Query: 65 SNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYN--INVAFGACGNCGSHPDD 122
+V+V + GI +T +GRGG I + S + N + CGS
Sbjct: 282 RDVRVHDCLFDGTDRGIRIKTRRGRGGAISNLHFSSVRMKNNLCPLTLNMYYRCGSLDPQ 341
Query: 123 DFD------PDALPAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSNISLLINPGS 175
DF D P+I+ +T +D + T + F G+ E+P ++ + N + +
Sbjct: 342 DFSLEKLSITDTTPSIEGVTIEDCYSEDFTSSAAFIVGLPESPIRDLVIRNCTFTVAKTG 401
Query: 176 YNSWECSNIHGSSESVFPEP 195
+ S ++ PEP
Sbjct: 402 LTPVDESEMYEG----LPEP 417
>gi|29349531|ref|NP_813034.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341440|gb|AAO79228.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 528
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 10/176 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV + +C G DAI LKSG DE G G P +V I+ + G V GSEM
Sbjct: 296 SCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTVLHGHGGFV-IGSEM 354
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV V + G+ F++T+GRGG ++ I I + + I+++ A +
Sbjct: 355 SGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINM--IDISNDALTMDLYYA 412
Query: 121 DDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICLSNISL 169
+DF +P +++ T F++I +N+ G F G+ E P NI + N+++
Sbjct: 413 VNDFPETPIPDVNEETPVFRNIYISNVLCRGAERAVYFNGLPEMPLKNIFIKNMTV 468
>gi|423215151|ref|ZP_17201679.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692414|gb|EIY85652.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
Length = 513
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 6/172 (3%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G YG+ ++ I ++ S G V GSEM
Sbjct: 248 SCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHG-GVVIGSEM 306
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV-AFGACGNCGSH 119
SGG+ V + + +GI ++++GRGG ++++ + + + NI AF +
Sbjct: 307 SGGVRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAF--IFDLFYD 364
Query: 120 PDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ +P + P I +I G++I G GI+E P + SNI++
Sbjct: 365 KESKVEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINM 416
>gi|357494033|ref|XP_003617305.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518640|gb|AET00264.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 156
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 90/186 (48%), Gaps = 49/186 (26%)
Query: 21 LKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFG----SEMSGGISNVQVEKIHLYD 76
+KSGWD+YGI+YGR ++ + IR V SGSS G SE SG + NV
Sbjct: 1 MKSGWDKYGISYGRLSSSITIRHV-----SGSSPFIGIAGVSETSGRVDNVNDM------ 49
Query: 77 SLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQIT 136
GIE++ G + I IS G+ G HPDD D +ALP
Sbjct: 50 ---GIEYKCVYIYGECKEGIQIS--------------GDVGDHPDDKCDLNALP------ 86
Query: 137 FKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN---SWECSNIHGSSESVFP 193
I AG G++ +PF +ICLS+I+L G+ + S +CS++ G + V P
Sbjct: 87 --------IVKAGLIQGMKNSPFTDICLSDINLHEVNGTRSRTPSCKCSDVFGVALQVSP 138
Query: 194 EPCPEL 199
PCPEL
Sbjct: 139 WPCPEL 144
>gi|160885582|ref|ZP_02066585.1| hypothetical protein BACOVA_03584 [Bacteroides ovatus ATCC 8483]
gi|299147452|ref|ZP_07040517.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|423290253|ref|ZP_17269102.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|423294451|ref|ZP_17272578.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
gi|156109204|gb|EDO10949.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|298514730|gb|EFI38614.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|392665640|gb|EIY59163.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|392675642|gb|EIY69083.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
Length = 513
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 6/172 (3%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G YG+ ++ I ++ S G V GSEM
Sbjct: 248 SCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHG-GVVIGSEM 306
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV-AFGACGNCGSH 119
SGG+ V + + +GI ++++GRGG ++++ + + + NI AF +
Sbjct: 307 SGGVRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAF--IFDLFYD 364
Query: 120 PDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ +P + P I +I G++I G GI+E P + SNI++
Sbjct: 365 KESKVEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINM 416
>gi|336415217|ref|ZP_08595558.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
gi|335941250|gb|EGN03108.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
Length = 513
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 6/172 (3%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G YG+ ++ I ++ S G V GSEM
Sbjct: 248 SCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHG-GVVIGSEM 306
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV-AFGACGNCGSH 119
SGG+ V + + +GI ++++GRGG ++++ + + + NI AF +
Sbjct: 307 SGGVRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAF--IFDLFYD 364
Query: 120 PDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ +P + P I +I G++I G GI+E P + SNI++
Sbjct: 365 KESKVEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINM 416
>gi|346223842|ref|ZP_08844984.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 532
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 91/190 (47%), Gaps = 22/190 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVL---LQSSSGSSVAFG 57
SS +V +E + G DAI LKSG++E G+A PT +V IR +++ SG V FG
Sbjct: 273 SSHDVLLEYNQLHTGDDAIVLKSGFNEDGLAINIPTENVVIRNYYAYKVRTGSGG-VVFG 331
Query: 58 SEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDA-------ELYNINVAF 110
SE SGGI NV V GI F+T +GRG I+ I + D E NIN A+
Sbjct: 332 SETSGGIRNVYVHDAVFEKCDRGIRFKTARGRGNVIENIFVRDISMKDITYEAININTAY 391
Query: 111 GACGNCGSHPDDDFD---------PDA--LPAIDQITFKDIIGTNITIAGNFTGIQEAPF 159
G S + D PDA L + + ++I NI + + GI+ A
Sbjct: 392 AGAGIGPSPMVRNIDIRNIRIDGVPDAIVLNGLPEKWIENIRMDNIIVTNSEKGIRLARV 451
Query: 160 ANICLSNISL 169
NI L NI L
Sbjct: 452 KNITLENIRL 461
>gi|448373202|ref|ZP_21557548.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
gi|445644701|gb|ELY97713.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
Length = 544
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 3/171 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V I D I G DAI +KSG D G G P + + + +++ G V GSEM
Sbjct: 239 SSRYVRISDAYINAGDDAICIKSGKDAEGREVGEPASQITVTNCTVEAGHGG-VVIGSEM 297
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + +V V D+ GI +T +GRGG ++ + + I F G +
Sbjct: 298 SGDVRDVTVTNCTFTDTDRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPL 357
Query: 121 DDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
D D +P + P + ++F +I N+ AG F G+ E F I ++ +
Sbjct: 358 DSDPEPIDEGTPLVRNVSFSNITARNVETAGFFAGLPERYFEGISFRDVRI 408
>gi|255692376|ref|ZP_05416051.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260621842|gb|EEX44713.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 513
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G YG+ ++ I ++ S G V GSEM
Sbjct: 248 SCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHG-GVVIGSEM 306
Query: 61 SGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIKQIVISDAELYNINV-AFGACGNCGS 118
SGG+ V + ++D ++ GI ++++GRGG ++++ + + + NI AF +
Sbjct: 307 SGGVRRVTISNC-VFDGIDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAF--IFDLFY 363
Query: 119 HPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ +P + P I +I G++I G GI+E P + SNI++
Sbjct: 364 DKESKMEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINM 416
>gi|383166817|gb|AFG66401.1| Pinus taeda anonymous locus 0_14606_01 genomic sequence
gi|383166819|gb|AFG66402.1| Pinus taeda anonymous locus 0_14606_01 genomic sequence
gi|383166821|gb|AFG66403.1| Pinus taeda anonymous locus 0_14606_01 genomic sequence
gi|383166823|gb|AFG66404.1| Pinus taeda anonymous locus 0_14606_01 genomic sequence
gi|383166825|gb|AFG66405.1| Pinus taeda anonymous locus 0_14606_01 genomic sequence
gi|383166827|gb|AFG66406.1| Pinus taeda anonymous locus 0_14606_01 genomic sequence
gi|383166829|gb|AFG66407.1| Pinus taeda anonymous locus 0_14606_01 genomic sequence
gi|383166831|gb|AFG66408.1| Pinus taeda anonymous locus 0_14606_01 genomic sequence
gi|383166833|gb|AFG66409.1| Pinus taeda anonymous locus 0_14606_01 genomic sequence
gi|383166835|gb|AFG66410.1| Pinus taeda anonymous locus 0_14606_01 genomic sequence
gi|383166837|gb|AFG66411.1| Pinus taeda anonymous locus 0_14606_01 genomic sequence
gi|383166839|gb|AFG66412.1| Pinus taeda anonymous locus 0_14606_01 genomic sequence
gi|383166841|gb|AFG66413.1| Pinus taeda anonymous locus 0_14606_01 genomic sequence
gi|383166843|gb|AFG66414.1| Pinus taeda anonymous locus 0_14606_01 genomic sequence
gi|383166845|gb|AFG66415.1| Pinus taeda anonymous locus 0_14606_01 genomic sequence
gi|383166847|gb|AFG66416.1| Pinus taeda anonymous locus 0_14606_01 genomic sequence
gi|383166849|gb|AFG66417.1| Pinus taeda anonymous locus 0_14606_01 genomic sequence
Length = 71
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Query: 139 DIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWECSNIHGSSESVFPEPCPE 198
DI+G I IAGN GIQEAPF +ICLSNI L N S + W CSN++G SESV+P+PC E
Sbjct: 1 DIVGDGIMIAGNIEGIQEAPFRDICLSNIYL--NVTSESPWNCSNVNGFSESVYPQPCAE 58
Query: 199 LENSSSNSSSTC 210
L++ N SS C
Sbjct: 59 LQSPIPNDSSVC 70
>gi|448360766|ref|ZP_21549393.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
gi|445652552|gb|ELZ05438.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
Length = 522
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 3/171 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V I D I G DAI +KSG D G G P + + + +++ G V GSEM
Sbjct: 217 SSRYVRISDAYINAGDDAICIKSGKDAEGREVGEPASQITVTNCTVEAGHGG-VVIGSEM 275
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + +V V D+ GI +T +GRGG ++ + + I F G +
Sbjct: 276 SGDVRDVTVTNCTFTDTDRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPL 335
Query: 121 DDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
D D +P + P + ++F +I N+ AG F G+ E F I ++ +
Sbjct: 336 DSDPEPIDEGTPLVRNVSFSNITARNVETAGFFAGLPERYFEGISFRDVRI 386
>gi|448349773|ref|ZP_21538602.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
gi|445639084|gb|ELY92202.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
Length = 522
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 3/171 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V I D I G DAI +KSG D G G P + + + +++ G V GSEM
Sbjct: 217 SSRYVRISDAYINAGDDAICIKSGKDAEGREVGEPASQITVANCTVEAGHGG-VVIGSEM 275
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + +V V D+ GI +T +GRGG ++ + + I F G +
Sbjct: 276 SGDVRDVTVSNCTFTDTDRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPL 335
Query: 121 DDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
D D +P + P + ++F +I N+ AG F G+ E F I ++ +
Sbjct: 336 DSDPEPTGEGTPLVRNVSFSNITARNVETAGFFAGLPERYFEGISFRDVRI 386
>gi|212693830|ref|ZP_03301958.1| hypothetical protein BACDOR_03351 [Bacteroides dorei DSM 17855]
gi|212663719|gb|EEB24293.1| glycosyl hydrolase, family 43 [Bacteroides dorei DSM 17855]
Length = 957
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S+ NV IE+CI G DAI++K+G D G GRP+ ++ IR L QS + + GSEM
Sbjct: 749 STSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSEC-NGLCIGSEM 807
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISD 100
SGG+ N+ ++ I + N + F++ + RGGYI+ I +S+
Sbjct: 808 SGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSN 847
>gi|265755035|ref|ZP_06089949.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
gi|263234646|gb|EEZ20225.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
Length = 955
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S+ NV IE+CI G DAI++K+G D G GRP+ ++ IR L QS + + GSEM
Sbjct: 747 STSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSEC-NGLCIGSEM 805
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISD 100
SGG+ N+ ++ I + N + F++ + RGGYI+ I +S+
Sbjct: 806 SGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSN 845
>gi|423232721|ref|ZP_17219121.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|423247413|ref|ZP_17228463.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
gi|392623160|gb|EIY17265.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|392632553|gb|EIY26512.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
Length = 955
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S+ NV IE+CI G DAI++K+G D G GRP+ ++ IR L QS + + GSEM
Sbjct: 747 STSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSEC-NGLCIGSEM 805
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISD 100
SGG+ N+ ++ I + N + F++ + RGGYI+ I +S+
Sbjct: 806 SGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSN 845
>gi|237709360|ref|ZP_04539841.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
gi|229456745|gb|EEO62466.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
Length = 938
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S+ NV IE+CI G DAI++K+G D G GRP+ ++ IR L QS + + GSEM
Sbjct: 730 STSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSEC-NGLCIGSEM 788
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISD 100
SGG+ N+ ++ I + N + F++ + RGGYI+ I +S+
Sbjct: 789 SGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSN 828
>gi|345513230|ref|ZP_08792752.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|345456240|gb|EEO47229.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 955
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S+ NV IE+CI G DAI++K+G D G GRP+ ++ IR L QS + + GSEM
Sbjct: 747 STSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSEC-NGLCIGSEM 805
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISD 100
SGG+ N+ ++ I + N + F++ + RGGYI+ I +S+
Sbjct: 806 SGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSN 845
>gi|430005219|emb|CCF21020.1| Polygalacturonase-like protein [Rhizobium sp.]
Length = 521
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 18/183 (9%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYG----IAYGRPTTDVHIRRVLLQSSSGSSVAFG 57
S + +E +G D I++K+G + G A+ R T DV IR L++ G V G
Sbjct: 287 SSEIRVEGVRFTVGDDCIAIKAG--KRGPCGEAAHLRETRDVQIRHCLMERGHGG-VVIG 343
Query: 58 SEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG 117
SEMSGG+ +V VE + + G+ +T +GRGG + I + + + AF A +
Sbjct: 344 SEMSGGVHDVLVEDCEMIGTDRGLRLKTRRGRGGSVSGITMRRVRMEGVLTAFSANAHYH 403
Query: 118 SHPD--DDF----DPDAL----PAIDQITFKDIIGTNITIA-GNFTGIQEAPFANICLSN 166
PD D++ P AL P ID I +DI + A G F G+ EAP N+ + N
Sbjct: 404 CDPDGHDEWVQSRQPAALDEGTPEIDGIAVEDIDLHEVGHAVGAFLGLPEAPIRNVSIRN 463
Query: 167 ISL 169
+ +
Sbjct: 464 LRV 466
>gi|423242205|ref|ZP_17223315.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
gi|392639949|gb|EIY33757.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
Length = 955
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S+ NV IE+CI G DAI++K+G D G GRP+ ++ IR L QS + + GSEM
Sbjct: 747 STSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSEC-NGLCIGSEM 805
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISD 100
SGG+ N+ ++ I + N + F++ + RGGYI+ I +S+
Sbjct: 806 SGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSN 845
>gi|386819250|ref|ZP_10106466.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424356|gb|EIJ38186.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 569
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 90/191 (47%), Gaps = 18/191 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I + +G DAI +KSG D+ G G PT +V ++ + + G V GSEM
Sbjct: 295 SCKNVLIYNNTFDVGDDAICIKSGKDKDGRDRGIPTENVIVKNNTVYHAHGGFV-IGSEM 353
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI---NVAFGA--CGN 115
SGG+ N+ V + + G+ F++T+GRGG ++ I ISD + NI + F GN
Sbjct: 354 SGGVKNINVSNCNFIGTDVGLRFKSTRGRGGVVENIYISDINMINIPTEAIRFNMFYSGN 413
Query: 116 C------GSHPDDDFDPDAL------PAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 163
+ D+ D + P I K+II TN A F G+ E N+
Sbjct: 414 APILEENQNAEDEQRDEQKVAVTEETPVFKNIYMKNIIATNSGKAAFFMGLPEKSLENVT 473
Query: 164 LSNISLLINPG 174
L N L + G
Sbjct: 474 LENAMLEADEG 484
>gi|325106070|ref|YP_004275724.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974918|gb|ADY53902.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 552
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 85/177 (48%), Gaps = 9/177 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV +E CI +G DAI +KSG DE G G T +V IR + G V GSEM
Sbjct: 283 SCKNVLVEHCIFDVGDDAICIKSGKDEEGRKRGIATENVIIRNNTVYKGHGGFVV-GSEM 341
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN--VAFGACGNCGS 118
SGG N+ V + GI F+T++GRGG ++ I I D +++I+ F
Sbjct: 342 SGGAKNIFVYDCTFMGTDKGIRFKTSRGRGGVVENIFIKDINMFDIDQEAIFFDMYYWVK 401
Query: 119 HPDDDFDPDALPAIDQI-TFKDIIGTNITIAGN-----FTGIQEAPFANICLSNISL 169
P + + P ++ F+++ NIT G GI E P NI + N+ L
Sbjct: 402 SPKANEAVEIPPVTEETPIFRNVYIENITCNGAKKGIFVRGIPEMPVNNIHMKNLVL 458
>gi|391227888|ref|ZP_10264095.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
gi|391223381|gb|EIQ01801.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
Length = 916
Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
NV IE C++ G DAI +K+G DE G P+ ++ IR ++S G + GSEMS G
Sbjct: 236 NVLIEHCVVDTGDDAICIKAGRDEDAWEAGIPSENILIRHCEIRSGHG-GITIGSEMSAG 294
Query: 64 ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC----GNCGSH 119
+ N+ + I +T GRGG+IK I+I + I A G+
Sbjct: 295 VRNLHAHDCTCDGTDTAIRIKTKPGRGGFIKDILIENITARRIRHAAVELTFHYGDTLEK 354
Query: 120 PDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
P D + +PA++ I +++ + A + G+ P N+ L N+ +
Sbjct: 355 PPDPKNLKHVPAVENILIRNVRCDSAREALHLRGLPGHPLKNVTLQNLEI 404
>gi|325106104|ref|YP_004275758.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974952|gb|ADY53936.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 1277
Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 22/185 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S+ N +E+C G D I++KSG D+ G G+PT ++ +R +S + S V GSE+
Sbjct: 257 STTNALVENCHFRTGDDGIAIKSGRDQDGWRIGQPTENIIVRNSTFESLA-SGVCIGSEI 315
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV +E I + + N I F++ RGGY++ I + + ++ A
Sbjct: 316 SGGVRNVFIENIKIPKASNAIYFKSNLDRGGYMENTWIRNVNMDSVGTAI---------- 365
Query: 121 DDDFDPDALPAIDQ---ITFKDIIGTNITIAG------NFTGIQEAPFANICLSNISLLI 171
FDPD + F + NI A G ++ P N+ L N+ +
Sbjct: 366 --RFDPDYKSESKENYATRFNNFTIENINCAYASRSGIEVNGFKDMPITNVALKNVRITK 423
Query: 172 NPGSY 176
P S+
Sbjct: 424 TPVSH 428
>gi|373849855|ref|ZP_09592656.1| Polygalacturonase [Opitutaceae bacterium TAV5]
gi|372476020|gb|EHP36029.1| Polygalacturonase [Opitutaceae bacterium TAV5]
Length = 916
Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 5/170 (2%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
NV IE C++ G DAI +K+G DE G P ++ IR ++S G + GSEMS G
Sbjct: 236 NVLIEHCVVDTGDDAICIKAGRDEDAWEAGIPCENILIRHCEIRSGHG-GITIGSEMSAG 294
Query: 64 ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC----GNCGSH 119
+ N+ + I +T GRGG+IK I+I + I A G+
Sbjct: 295 VRNLHAHDCTCDGTDTAIRIKTKPGRGGFIKDILIENITARRIRHAAVELTFHYGDTLEK 354
Query: 120 PDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
P D + +PA++ I +++ + A + G+ P N+ L N+ +
Sbjct: 355 PPDPKNLKHVPAVENILIRNVRCDSAREALHLRGLPGHPLKNVTLQNLEI 404
>gi|347530390|ref|YP_004837153.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345500538|gb|AEN95221.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
Length = 382
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 3/170 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S V IEDC G D I++ SG +E G GRP + ++ ++VA GS M
Sbjct: 202 SCRKVLIEDCTFETGDDCIAINSGMNEDGWRVGRPCEQIEVKNCRFIGGH-AAVAIGSGM 260
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV-AFGACGNCGSH 119
SGGI ++ + + GI ++ +GRGGY+K++ + ++ I A N GS
Sbjct: 261 SGGICDIWIHDCVARGTERGIRIKSMRGRGGYVKRVNVERMQMDEIEKEAIEVSMNYGSS 320
Query: 120 PDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
A P ++ F I G + I + G+ E+P I L ++S+
Sbjct: 321 TAVPVSQKA-PEFSELRFAHIRGNHAAIGVSLCGLPESPLREITLEDVSI 369
>gi|338730196|ref|YP_004659588.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
gi|335364547|gb|AEH50492.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
Length = 515
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 12/182 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I C I++G D +++K+G E + P+ ++ IR L++ G+ V GSEM
Sbjct: 277 SCSNVLIAGCRISVGDDCVAVKAGKYEVKQKFDVPSENIEIRNCLMEHGHGA-VVIGSEM 335
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV--AFGACGNCGS 118
S G+ NV+V ++ G+ +T + RGGY+ +I + + ++ + V A NCG+
Sbjct: 336 SCGVRNVKVSNCLFVNTDRGLRIKTRRERGGYVDEIELKNVQMNGVFVPLAINCFYNCGA 395
Query: 119 HPDDDFDPDAL--------PAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
D + D + P I I K+++ ++ F G+ E I + N+ +
Sbjct: 396 DYDPLYSSDKVVADVNERTPTIGSIVMKNVLCEDVKSMAAFVYGLPEKKIEKIYMENVRI 455
Query: 170 LI 171
I
Sbjct: 456 EI 457
>gi|146301851|ref|YP_001196442.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156269|gb|ABQ07123.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 560
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 16/186 (8%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
NV +E+ +G DAI +KSG D+ G+ G P ++ +R ++ G V GSEMSGG
Sbjct: 292 NVLVENSSFDVGDDAICIKSGKDKDGLERGIPCENIIVRNNIVYHGHGG-VTVGSEMSGG 350
Query: 64 ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFG--ACG 114
+ N+ V + G+ F++ +GRGG ++ I ISD + +I N+ +G +
Sbjct: 351 VKNLHVSNCTFMGTDVGLRFKSARGRGGVVENIFISDVFMTDIPSQAISFNLYYGGKSIA 410
Query: 115 NCGSHPDDDFDPDALPA-IDQITFKDIIGTNITIAGN-----FTGIQEAPFANICLSNIS 168
D A+P I+ FK+I NITI G G+ E NI +SN++
Sbjct: 411 ETLEEGGDKIVNKAMPVTIETPQFKNISIKNITIKGAQQAVFLQGLPEMNLENIEISNLT 470
Query: 169 LLINPG 174
+ G
Sbjct: 471 VTAEKG 476
>gi|423223595|ref|ZP_17210064.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638220|gb|EIY32067.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 491
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 7/202 (3%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G YG+ ++ I ++ S G V GSEM
Sbjct: 248 SCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSGHG-GVVIGSEM 306
Query: 61 SGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
SGG+ + + ++D N GI + ++GRGG ++ I + + + NI +
Sbjct: 307 SGGVKRIAISNC-VFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNIQ-GDAFIFDLFYD 364
Query: 120 PDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN 177
+P + P I ++ G +I G GI+E P + + SN++++ G +
Sbjct: 365 RLSKVEPVSERTPIFRNIHLSNVTGNDIKRIGYIKGIEEMPISELSFSNMNIVAGKG-FQ 423
Query: 178 SWECSNIHGSSESVFPEPCPEL 199
+ ++I ++ S E P L
Sbjct: 424 AETATDIRFNNVSFTVEEGPSL 445
>gi|380693857|ref|ZP_09858716.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 525
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 10/176 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV + +C G DAI LKSG DE G G P +V I+ + G V GSEM
Sbjct: 296 SCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTVLHGHGGFV-IGSEM 354
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV V + G+ F++T+GRGG ++ I I + + I++ A +
Sbjct: 355 SGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINM--IDIPNDALTMDLYYA 412
Query: 121 DDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICLSNISL 169
+D +P +++ T F++I +N+ G F G+ E P NI + N+++
Sbjct: 413 VNDSPETPIPDVNEETPVFRNIYISNVLCRGAGRAVYFNGLPEMPLKNILIKNMTV 468
>gi|224536535|ref|ZP_03677074.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521791|gb|EEF90896.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
Length = 491
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 7/202 (3%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G YG+ ++ I ++ S G V GSEM
Sbjct: 248 SCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSGHG-GVVIGSEM 306
Query: 61 SGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
SGG+ + + ++D N GI + ++GRGG ++ I + + + NI +
Sbjct: 307 SGGVKRIAISNC-VFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNIQ-GDAFIFDLFYD 364
Query: 120 PDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN 177
+P + P I ++ G +I G GI+E P + + SN++++ G +
Sbjct: 365 RLSKVEPVSERTPIFRNIHLSNVTGNDIKRIGYIKGIEEMPISELSFSNMNIVAGKG-FQ 423
Query: 178 SWECSNIHGSSESVFPEPCPEL 199
+ ++I ++ S E P L
Sbjct: 424 AETATDIRFNNVSFTVEEGPSL 445
>gi|224537997|ref|ZP_03678536.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520403|gb|EEF89508.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
Length = 452
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G G P ++ I ++ S G V GSEM
Sbjct: 250 SCRNVHISDCHISVGDDCITIKSGRDAQGRRLGVPCENITITNCIMLSGHGG-VVIGSEM 308
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 309 SGGVRKVTISNCIFDGTDRGIRLKSTRGRGGVVEDIRVSNIVMRNIKQEAVVLNLKYSGM 368
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ + P I + T++ G++EAP + I L +I +
Sbjct: 369 PAEPKSERTPLFRNIHISGMTVTDVKTPVKIVGLEEAPISEIVLRDIHV 417
>gi|336251837|ref|YP_004585805.1| Polygalacturonase [Halopiger xanaduensis SH-6]
gi|335339761|gb|AEH38999.1| Polygalacturonase [Halopiger xanaduensis SH-6]
Length = 516
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 3/171 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V I D I G DAI +KSG + G G P + + + +++ G V GSEM
Sbjct: 218 SSRYVRISDAYINAGDDAICIKSGKNAEGREVGEPASQITVTNCTVEAGHGG-VVIGSEM 276
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + +V V D+ G+ +T + RGG ++ + + + I F G +
Sbjct: 277 SGDVRDVAVTNCTFTDTDRGVRIKTQRDRGGVVEDLRFDNIVMRRIASPFTINGYYFTPL 336
Query: 121 DDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
D + +P + P + +TF +I N+ AG F G+ E F I N+ +
Sbjct: 337 DSEPEPVDEGTPMVRNVTFSNITARNVETAGFFAGLPEQYFEGIEFDNVRI 387
>gi|298385027|ref|ZP_06994586.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298262171|gb|EFI05036.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 528
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 10/176 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV + +C G DAI LKSG DE G G +V I+ + G V GSEM
Sbjct: 296 SCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGESCENVIIKNNTVLHGHGGFV-IGSEM 354
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV V + G+ F++T+GRGG ++ I I + + I++ A +
Sbjct: 355 SGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINM--IDIPNDALTMDLYYA 412
Query: 121 DDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICLSNISL 169
+DF +P +++ T F++I +N+ G F G+ E P NI + N+++
Sbjct: 413 VNDFPETPIPDVNEETPVFRNIYISNVLCRGAGRAVYFNGLPEMPLKNIFIKNMTV 468
>gi|167521696|ref|XP_001745186.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776144|gb|EDQ89764.1| predicted protein [Monosiga brevicollis MX1]
Length = 945
Score = 77.0 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 40/225 (17%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR------------------ 42
S NV +E C I+ G D I++KSG +A PT +V IR
Sbjct: 729 SCQNVLVERCYISTGDDCIAIKSGRGPQALAINMPTANVTIRHVPQRVGRDYDATAIGSY 788
Query: 43 -----RVLLQSSSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIV 97
++ ++G ++ GSEMSGGI +V + + L + NG+ +T GRGG ++ +
Sbjct: 789 ALCRGQIRTDCTTGHGISIGSEMSGGIYDVLFDNLTLSGTTNGVRVKTCMGRGGSVRNVT 848
Query: 98 ISDAELYNINVAFGACGNCGSHPDDDFDP-----DALPAIDQITFKDIIGTNITIAGNFT 152
+ + +++ A + D++ DALP I +++I N+ +A
Sbjct: 849 YRNMVIDSVDTAVLI--------NQDYNSVTCVGDALPNFSDILVQNVIANNVKMAFELE 900
Query: 153 GIQEAPFANICLSNISLLINPGSYNSWECSNIHGS-SESVFPEPC 196
+Q+ A + N+++ N+ +C+++ +V P PC
Sbjct: 901 CLQDNSCAGLRFENVTV---TAFQNASKCAHVQPEIGPNVSPVPC 942
>gi|383120469|ref|ZP_09941197.1| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
gi|382985005|gb|EES68560.2| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
Length = 528
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 10/176 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV + +C G DAI LKSG DE G G P +V I+ + G V GSEM
Sbjct: 296 SCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTVLHGHGGFV-IGSEM 354
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV V + G+ F++T+GRGG ++ I I + + I++ A +
Sbjct: 355 SGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINM--IDIPNDALTMDLYYA 412
Query: 121 DDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICLSNISL 169
+D +P +++ T F++I +N+ G F G+ E P NI + N+++
Sbjct: 413 VNDSPETPIPDVNEETPVFRNIYISNVLCRGAGRAVYFNGLPEMPLKNIFIKNMTV 468
>gi|224536550|ref|ZP_03677089.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521806|gb|EEF90911.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
Length = 462
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 87/193 (45%), Gaps = 7/193 (3%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE C + G DAI++KSG D G+PT +V IR +S + V GSE+
Sbjct: 255 SCRNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENVVIRNCSFRSKI-NGVCIGSEI 313
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
+GG+ N+ +E I + S N I F++ RG YI+ + + + + + A
Sbjct: 314 AGGVRNIFIENITIPKSSNAIYFKSNLDRGAYIQDVYVRNVQADTVRTALIRFEPNYKGE 373
Query: 121 DDDFDPDALPA--IDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS 178
F P + I+ +T K I +A G E P NI L N+++ P Y
Sbjct: 374 RSAFHPTLFDSFLIENVTCKQSNECGIYMA----GFAERPLQNIVLKNVTIGKVPTPYCF 429
Query: 179 WECSNIHGSSESV 191
NI S V
Sbjct: 430 QNGENIRFQSVKV 442
>gi|431796309|ref|YP_007223213.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787074|gb|AGA77203.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 524
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 81/174 (46%), Gaps = 10/174 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I D I++G D I++KSG D G + PT +V I + S G V GSE+
Sbjct: 245 SCRNVHISDSHISVGDDCITIKSGRDMDGRKWDTPTENVTITNCTMLSGHGG-VVIGSEV 303
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQI-----VISDAELYNINVAFGACGN 115
SG I V + + GI + +GRGG +++I V+ D +L I + N
Sbjct: 304 SGSIRKVTISNCVFDGTDRGIRLKAARGRGGVVEEIRVDNVVMKDIQLEAIVMNLFYDKN 363
Query: 116 CGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
P + PA I ++ G+ I +AG GI E P I SNI++
Sbjct: 364 TKEGPVT----EETPAFRNIHISNVTGSQINVAGKILGIPEMPIDQISFSNINM 413
>gi|403744854|ref|ZP_10953930.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121782|gb|EJY56052.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 865
Score = 77.0 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S + + I D ++G D I++KSG D G G P+ ++ +R + + G S+ GSEM
Sbjct: 343 SVNGMQIIDDTFSVGDDDIAIKSGKDAEGRRIGIPSQNIVVRNCHMLNGHGVSI--GSEM 400
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV-AFGACGNCGSH 119
SGG+ NV VE + G+ +T +GRGG ++ I + NI AF N S+
Sbjct: 401 SGGVQNVLVENCDFDGTNAGLRIKTLRGRGGIVQNITFDHVSMSNIQAQAFIIDENYASN 460
Query: 120 PDDDFDP----DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGS 175
P DA PAI + F +I A F+G+ E P NI N+++ G+
Sbjct: 461 -GSALPPGPVTDATPAIRNLNFDNITVNGAKQAMYFSGLAELPIQNIAFHNVAI---NGA 516
Query: 176 YNSWECSNIHG 186
+ + N+ G
Sbjct: 517 GSGIQAENVEG 527
>gi|189464497|ref|ZP_03013282.1| hypothetical protein BACINT_00839 [Bacteroides intestinalis DSM
17393]
gi|189438287|gb|EDV07272.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 492
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 6/177 (3%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G YG+ ++ I ++ S G V GSEM
Sbjct: 248 SCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSGHG-GVVIGSEM 306
Query: 61 SGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
SGG+ V + ++D N GI + ++GRGG ++ I + + + NI +
Sbjct: 307 SGGVKRVAISNC-VFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNIQ-GDAFIFDLFYD 364
Query: 120 PDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPG 174
+P + P I ++ G +I G GI+E P + + SN++++ G
Sbjct: 365 RLSKVEPVSERTPIFRNIHLSNVTGNDIKRIGYIKGIEEMPVSELSFSNMNIVAEQG 421
>gi|361067219|gb|AEW07921.1| Pinus taeda anonymous locus 0_14606_01 genomic sequence
Length = 71
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 139 DIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNSWECSNIHGSSESVFPEPCPE 198
DI+G I IAG GIQEAPF ICLSNI L N S + W CSN++G SE+V+P+PC E
Sbjct: 1 DIVGDGIMIAGTIEGIQEAPFRAICLSNIYL--NVTSESPWNCSNVNGFSEAVYPQPCAE 58
Query: 199 LENSSSNSSSTC 210
L+ N SS C
Sbjct: 59 LQGPIPNDSSVC 70
>gi|431798423|ref|YP_007225327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789188|gb|AGA79317.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 565
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 92/191 (48%), Gaps = 28/191 (14%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N + + +G DAI KSG ++ G G PT +V ++ + + G V GSEM
Sbjct: 291 SCKNALVYNNTFDVGDDAICFKSGKNQDGRDRGMPTENVIVKNNTVYHAHGGFVV-GSEM 349
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ NV V + G+ F++T+GRGG ++ I ISD ++ NI N+ +G
Sbjct: 350 SGGVRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIHISDIDMINIPTDAIRFNMFYG-- 407
Query: 114 GNCGSHPDDDFDPDA---------LPAIDQI-TFKDIIGTNITIAGN-----FTGIQEAP 158
G+ P + D DA +P ++ FKDI NIT G+ F G+ E
Sbjct: 408 ---GNSPVLEEDQDAEDEARDETIVPVTEETPAFKDIYMKNITATGSGTAAFFMGLPEKS 464
Query: 159 FANICLSNISL 169
N+ L N L
Sbjct: 465 LENVRLENALL 475
>gi|448394041|ref|ZP_21567906.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
gi|445662631|gb|ELZ15395.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
Length = 518
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 3/171 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V I D I G DAI +KSG + G G P + + + +++ G V GSEM
Sbjct: 217 SSRYVRISDTYINAGDDAICIKSGKNAEGREVGEPASQITVTNCTVEAGHGG-VVIGSEM 275
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + +V V D+ G+ +T + RGG ++ + + + I F G
Sbjct: 276 SGDVRDVTVTNCTFTDTDRGVRIKTARNRGGVVEDLRFDNIVMRRIACPFTINGYYFMPL 335
Query: 121 DDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
D D +P + P + ++F +I + AG F G+ E F I S++ +
Sbjct: 336 DSDSEPVDEGTPMVRNVSFTNITARQVETAGFFAGLPEQYFEGISFSDVQI 386
>gi|379720205|ref|YP_005312336.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
gi|378568877|gb|AFC29187.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
Length = 518
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 21/187 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S+ +V I + +IA D I++KSG +E G G P+ ++ I + +S G VA GSEM
Sbjct: 295 STSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIPSQNIRISNCIFKSGFG--VATGSEM 352
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC------- 113
SGG+ NV++ D + + +GRG I+ + + D L N ++ C
Sbjct: 353 SGGVRNVRISDCRFEDVYSIATIKAPRGRGAVIENVTVEDCTLTNYSLEHEDCRWFRGAI 412
Query: 114 --GNCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITI---AGN---FTGIQEAPFANIC 163
SH DFD D + +D+ T ++I NI + AGN G+ E+P NI
Sbjct: 413 NIDQFYSHA--DFDADKVEEVDEGTSVIRNIHLKNIVLDTHAGNAVFMAGLPESPLQNIR 470
Query: 164 LSNISLL 170
L N++ L
Sbjct: 471 LENVNAL 477
>gi|427384860|ref|ZP_18881365.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
gi|425728121|gb|EKU90980.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
Length = 462
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 87/193 (45%), Gaps = 7/193 (3%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE C + G DAI++KSG D G+PT +V IR +S + V GSE+
Sbjct: 255 SCRNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENVVIRNCSFRSKI-NGVCIGSEI 313
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
+GG+ N+ +E I + S N I F++ RG YI+ + + + + + A
Sbjct: 314 AGGVRNIFIENITIPKSSNAIYFKSNLDRGAYIQDVYVRNVQADTVRTALIRFEPNYKGE 373
Query: 121 DDDFDPDALPA--IDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYNS 178
F P + I+ +T K I +A G E P NI L N+++ P Y
Sbjct: 374 RSAFHPTLFNSFLIENVTCKQSNECGIYMA----GFAERPLQNIVLKNVTIGKVPTPYCF 429
Query: 179 WECSNIHGSSESV 191
NI S +
Sbjct: 430 QNGENIRFQSVKI 442
>gi|408501393|ref|YP_006865312.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
gi|408466217|gb|AFU71746.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
Length = 437
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 13/185 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV + + + +G DAI+LKSG G+ +PT V+++ + +S G +A GSE
Sbjct: 215 SSTNVAVSNSLFDVGDDAITLKSGSGPDGLRVNKPTAHVNVKDCTILASHGG-IAIGSET 273
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYN--INVAFGACGNCGS 118
+GGI++V VEK + GI ++ +GRGG IK I + E+ + + G G
Sbjct: 274 AGGINDVNVEKCTFSGTQRGIRLKSRRGRGGTIKGITLRHLEMDHCWCPIVLGMYFAPGV 333
Query: 119 HP-DDDF------DP--DALPAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSNIS 168
P ++D+ P P I I +D+ N+ F G+ E+P N+ +
Sbjct: 334 LPQEEDYVLSKSAQPVEATTPHIRNIRIEDVRADNVRSTAAFIVGLPESPIENVSIDQFE 393
Query: 169 LLINP 173
+ P
Sbjct: 394 WHLAP 398
>gi|433424436|ref|ZP_20406465.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
gi|432198085|gb|ELK54408.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
Length = 519
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 3/171 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V + D I G DAI LKSG DE G GRPT +V + ++ G V GSE
Sbjct: 212 SSRFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCTVEHGHG-GVVIGSET 270
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
+G + +V V D+ GI ++ +GRGG ++ + + + F G +
Sbjct: 271 AGDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIAMRRVACPFVINGYYQTDI 330
Query: 121 DDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
D D +P +A P + + F I + A G+ E F I +++ +
Sbjct: 331 DSDPEPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDI 381
>gi|323453807|gb|EGB09678.1| hypothetical protein AURANDRAFT_2438, partial [Aureococcus
anophagefferens]
Length = 295
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S+ +V +E G D +++KSGWD +G+AYG+P+ ++ IR V + S + +A GSEM
Sbjct: 200 SARDVLVEHSTYVGGDDCVAIKSGWDCFGVAYGKPSRNITIRDVNC-TGSKAGIAIGSEM 258
Query: 61 SGGISNVQVEKIHLYDSLNGI-EFRTTKGRGGYIKQI 96
SGG+ +V V+++++ NGI +T RGGY++ +
Sbjct: 259 SGGVEDVLVQRVNILGKANGIAHVKTGPTRGGYVRNV 295
>gi|189462203|ref|ZP_03010988.1| hypothetical protein BACCOP_02885 [Bacteroides coprocola DSM 17136]
gi|189431106|gb|EDV00091.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 460
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S+ NV IE+C G DAI++KSG D G GRP+ ++ IR + S + + GSEM
Sbjct: 252 STTNVLIENCTFRTGDDAIAIKSGRDTDGRYIGRPSRNIVIRNCIFHSEC-NGLCIGSEM 310
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVI 98
SGG S+V + I + N I F++ + RGGYI+ +V+
Sbjct: 311 SGGASDVYMNNIEIGTVKNAIYFKSNRDRGGYIRNVVV 348
>gi|333382495|ref|ZP_08474165.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828806|gb|EGK01498.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
Length = 545
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + I +G DAI +KSG DE G RPT +V I + G V GSEM
Sbjct: 286 SCKNSIIVNSIFDVGDDAICIKSGKDEDGRRRNRPTENVLIDNCKVFQGHGGFVV-GSEM 344
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SG + N+ V + G+ F++ +GRGG ++ I I D +++I ++ +G
Sbjct: 345 SGSVRNILVSNCQFLGTDVGLRFKSCRGRGGVVENIYIRDINMFDIATESFLFDLYYGGK 404
Query: 114 GNCGSHPDDDFDP---------DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICL 164
S D D P + PA I K+++ N A F G+ E NI +
Sbjct: 405 SAVESLEDGDTIPVTSTILAVDETTPAFKNIYVKNLVSRNARRAMFFNGLPEMKIENINV 464
Query: 165 SNISL 169
++++
Sbjct: 465 EDVTI 469
>gi|261879637|ref|ZP_06006064.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333653|gb|EFA44439.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 496
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 18/186 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV + + G D I +KSG DE G GRP +V + + + G V GSEM
Sbjct: 288 SCKNVLVVNSKFDAGDDGICIKSGKDESGRKRGRPCENVVVDGCTVFAGHGGFVV-GSEM 346
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ N+ V++ + G+ F++ +GRGG ++ I I D + +I N+ +G
Sbjct: 347 SGGVRNILVKRCQFLGTDVGLRFKSKRGRGGIVENIFIHDISMTDIKTDAITFNMYYGGK 406
Query: 114 GNCGSHPDDDFDPDAL---------PAIDQITFKDIIGTNITIAGNFTGIQEAPFANICL 164
D D +PD + P I ++I+ A F G+ E P NI L
Sbjct: 407 SVAEMLADGD-NPDNVSKMPVTGETPIFRHIDIRNIVCYGAGRAMEFNGLPEMPIENINL 465
Query: 165 SNISLL 170
N+ ++
Sbjct: 466 ENVHII 471
>gi|386722797|ref|YP_006189123.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
gi|384089922|gb|AFH61358.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
Length = 518
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 21/187 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S+ +V I + +IA D I++KSG +E G G P+ ++ I +S G VA GSEM
Sbjct: 295 STSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIPSQNIRISNCTFKSGFG--VATGSEM 352
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC------- 113
SGG+ NV++ D + + +GRG I+ + + D L N ++ C
Sbjct: 353 SGGVRNVRISDCRFEDVYSIATIKAPRGRGAVIENVTVEDCTLTNYSLEHEDCRWFRGAI 412
Query: 114 --GNCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITI---AGN---FTGIQEAPFANIC 163
SH DFD D + +D+ T ++I NI + AGN G+ E+P NI
Sbjct: 413 NIDQFYSHA--DFDADKVEEVDEGTSVIRNIHLKNIVLDTHAGNAVFMAGLPESPLQNIR 470
Query: 164 LSNISLL 170
L N++ L
Sbjct: 471 LENVNAL 477
>gi|335034438|ref|ZP_08527786.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
gi|333794034|gb|EGL65383.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
Length = 517
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 92/186 (49%), Gaps = 20/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGW-----DEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 55
S NV I ++G D I++K+G ++ +A T + +R L+Q G V
Sbjct: 284 SCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAE---TRGISVRHCLMQRGHGGLV- 339
Query: 56 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACG- 114
GSEMSGG+ +V VE + + G+ +T +GRGG + I + L + A A
Sbjct: 340 IGSEMSGGVHDVTVEDCDMIGTDRGLRLKTRRGRGGIVSNITMRRVLLDGVQTALSANAH 399
Query: 115 -NCGSHPDDDF----DP----DALPAIDQITFKDIIGTNIT-IAGNFTGIQEAPFANICL 164
+C + DD+ +P D P +D IT +D+ N+ AG F G+ EAP NI +
Sbjct: 400 YHCDADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAAGVFLGLPEAPIRNIVV 459
Query: 165 SNISLL 170
N++++
Sbjct: 460 RNLTIV 465
>gi|15891800|ref|NP_357472.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
gi|15160276|gb|AAK90257.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
Length = 517
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 92/186 (49%), Gaps = 20/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGW-----DEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 55
S NV I ++G D I++K+G ++ +A T + +R L+Q G V
Sbjct: 284 SCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAE---TRGISVRHCLMQRGHGGLV- 339
Query: 56 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACG- 114
GSEMSGG+ +V VE + + G+ +T +GRGG + I + L + A A
Sbjct: 340 IGSEMSGGVHDVTVEDCDMIGTDRGLRLKTRRGRGGMVGNITMRRVLLDGVQTALSANAH 399
Query: 115 -NCGSHPDDDF----DP----DALPAIDQITFKDIIGTNIT-IAGNFTGIQEAPFANICL 164
+C + DD+ +P D P +D IT +D+ N+ AG F G+ EAP NI +
Sbjct: 400 YHCDADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAAGVFLGLPEAPIRNIVV 459
Query: 165 SNISLL 170
N++++
Sbjct: 460 RNLTIV 465
>gi|347531917|ref|YP_004838680.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345502065|gb|AEN96748.1| glycoside hydrolase family 28 [Roseburia hominis A2-183]
Length = 518
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V I ++G D I++KSG G Y P++++H+ + L++ G+ V GSEM
Sbjct: 280 SCRDVTICGVRFSLGDDCIAVKSGKIYMGRRYKTPSSNIHVYQCLMEHGHGA-VTVGSEM 338
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGACGNCGS 118
+GG++N+ VEK Y + G+ +T +GRG + I+ D + + F A
Sbjct: 339 AGGVNNLIVEKCRFYHTDRGLRIKTRRGRGKDAILDNIIFRDLMMEQVMTPFTANAFYFC 398
Query: 119 HPD------DDFDP----DALPAIDQITFKDIIGTNITIAGN-FTGIQEAPFANICLSNI 167
PD +P D P++ + F++I + +A + F G+ E I + N+
Sbjct: 399 DPDGRTEFVQSREPYPVDDGTPSMKRFCFENITAKDCHVAASYFDGLPEQKIEQITMRNV 458
Query: 168 SL 169
S+
Sbjct: 459 SV 460
>gi|337746270|ref|YP_004640432.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
gi|336297459|gb|AEI40562.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
Length = 475
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 17/185 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S+ +V I + +IA D I++KSG +E G G P+ ++ I +S G VA GSEM
Sbjct: 252 STSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIPSQNIRISNCTFKSGFG--VATGSEM 309
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF-------GAC 113
SGG+ NV++ D + + +GRG I+ + + D L N ++ GA
Sbjct: 310 SGGVRNVRISDCRFEDVYSIATIKAPRGRGAVIENVTVEDCTLTNYSLEHEDCRWFRGAI 369
Query: 114 GNCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITI---AGN---FTGIQEAPFANICLS 165
+ DFD D + +D+ T ++I NI + AGN G+ E+P NI L
Sbjct: 370 NIDQFYSHADFDADKVEEVDEGTSVIRNIHLKNIVLDTHAGNAVFMAGLPESPLQNIRLE 429
Query: 166 NISLL 170
N++ L
Sbjct: 430 NVNAL 434
>gi|326501180|dbj|BAJ98821.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 132
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%)
Query: 52 SSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFG 111
+ ++ GSEMSGG++N+ VE +H++DS G+ +T GRGGYI+ I S+ N+
Sbjct: 11 AGISIGSEMSGGVANITVENVHIWDSRRGVRIKTAIGRGGYIRNISYSNITFDNVRAGIV 70
Query: 112 ACGNCGSHPDDDFDPDALPAIDQITFK 138
+ H DD +D +A P I I+FK
Sbjct: 71 IKVDYNEHADDGYDRNAFPDITGISFK 97
>gi|224538252|ref|ZP_03678791.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221595|ref|ZP_17208065.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224520112|gb|EEF89217.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|392645922|gb|EIY39642.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 534
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 92/186 (49%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + I G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 295 SCKNALIVNNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 353
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ NV V + G+ F++T+GRGG ++ I I + + +I ++ +G
Sbjct: 354 SGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINMIDIPHEALLFDLFYGGK 413
Query: 114 GNCGSHPDDDFD---PDALPAIDQIT--FKDIIGTNITI-----AGNFTGIQEAPFANIC 163
G G +DD + ++P + + T F+DI TN+T A F G+ E P N+
Sbjct: 414 G-AGEETEDDLEGRMKSSVPPVTEKTPAFRDIHITNVTCRSVGRAMFFNGLPEMPIRNVH 472
Query: 164 LSNISL 169
+ ++ +
Sbjct: 473 VKDVVI 478
>gi|448621831|ref|ZP_21668580.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
gi|445754861|gb|EMA06255.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
Length = 512
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 3/171 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V + D I G DAI LKSG DE G GRPT +V + ++ G V GSE
Sbjct: 205 SSRFVRVSDTHIDAGDDAICLKSGKDEEGREVGRPTENVVVTNCTVEHGHG-GVVIGSET 263
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
+G + +V V D+ GI ++ +GRGG ++ + + + F G +
Sbjct: 264 AGDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDI 323
Query: 121 DDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
D D +P +A P + + F I + A G+ E F I +++ +
Sbjct: 324 DSDPEPVTEATPNVRNVDFHHITAEEVESAAFLAGLPERRFEGISFTDVDI 374
>gi|406667543|ref|ZP_11075299.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
gi|405384596|gb|EKB44039.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
Length = 448
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I +G D I++KSG ++ P ++ I + G V FGSEM
Sbjct: 192 SCRNVRISDCSIDVGDDCIAIKSGTEDAERVI--PCENITITNCTMLHGHGG-VVFGSEM 248
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF-----GACGN 115
SG I NV V + GI F++ +GRGG I+ I +++ + NI F G
Sbjct: 249 SGDIRNVVVSNCIFEGTDRGIRFKSRRGRGGTIENIRVNNIVMNNIICPFILNLYYYHGP 308
Query: 116 CGSHP---DDDFDP-DAL-PAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
G P D + P AL P I F +I T++T A F G+ E P +I S+I +
Sbjct: 309 RGMEPYVSDKEVQPVTALTPKFRHIHFSNITATDVTAAAGFMYGLPEMPVEDITFSHIRI 368
Query: 170 LINP 173
+ P
Sbjct: 369 AMKP 372
>gi|448540079|ref|ZP_21623316.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|448552184|ref|ZP_21629848.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|448553851|ref|ZP_21630729.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
gi|445709350|gb|ELZ61181.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|445709953|gb|ELZ61776.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|445719854|gb|ELZ71532.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
Length = 516
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 3/171 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V + D I G DAI LKSG DE G GRPT +V + ++ G V GSE
Sbjct: 212 SSRFVRVSDTHIDAGDDAICLKSGKDEEGREVGRPTENVVVTNCTVEHGHG-GVVIGSET 270
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
+G + +V V D+ GI ++ +GRGG ++ + + + F G +
Sbjct: 271 AGDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDI 330
Query: 121 DDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
D D +P +A P + + F I + A G+ E F I +++ +
Sbjct: 331 DSDPEPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDI 381
>gi|427387085|ref|ZP_18883141.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
gi|425725690|gb|EKU88559.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
Length = 534
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 87/184 (47%), Gaps = 19/184 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + I G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 295 SCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 353
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ NV V + G+ F++T+GRGG ++ I I + + +I ++ +G
Sbjct: 354 SGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINMIDIPHEALLFDLFYGGK 413
Query: 114 GNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G G +DD + +T F+DI TNIT G F G+ E P N+
Sbjct: 414 G-AGEETEDDLAGRMKATVPPVTEETPAFRDIHITNITCKGAGRAMFFNGLPEMPIRNVH 472
Query: 164 LSNI 167
+ ++
Sbjct: 473 VKDV 476
>gi|409198539|ref|ZP_11227202.1| glycoside hydrolase [Marinilabilia salmonicolor JCM 21150]
Length = 531
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 85/180 (47%), Gaps = 22/180 (12%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVL---LQSSSGSSVAFG 57
SS + +E ++ G DAI LKSG++E G+ PT +V IR +++ SG V FG
Sbjct: 272 SSSDALLEYNHLSTGDDAIVLKSGFNEEGLEINIPTENVVIRNYYAYDVRTGSGG-VVFG 330
Query: 58 SEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAF 110
SE SGGI N+ V GI F+T +GRG + I+ISD ++ NI N A+
Sbjct: 331 SETSGGIRNIYVHDALFEKCDRGIRFKTARGRGNITENIIISDVQMKNIRYEAINFNTAY 390
Query: 111 GACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLL 170
G S P + I +++ + A G+ E NI + NIS +
Sbjct: 391 TGAGVGPS-----------PLVRNIEIRNVKIDGVPNAIVLNGLPEKWIENIYMENISAI 439
>gi|289578915|ref|YP_003477542.1| glycoside hydrolase family protein [Thermoanaerobacter italicus
Ab9]
gi|289528628|gb|ADD02980.1| glycoside hydrolase family 28 [Thermoanaerobacter italicus Ab9]
Length = 519
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 78/179 (43%), Gaps = 14/179 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+S NV I C ++G D I++KSG + G+ T V +R ++ G V GSEM
Sbjct: 282 ASKNVLILGCKFSVGDDCIAIKSGKFDMAQKLGKLTEKVFVRNCYMEYGHGG-VVIGSEM 340
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF---------- 110
SGG+ V VEK ++ GI +T +GRGG+I +I + + F
Sbjct: 341 SGGVKEVYVEKCIFNNTDRGIRIKTRRGRGGFIDEIHADKIRMNRVKTPFTINSFYFCDS 400
Query: 111 -GACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNI 167
G S D P I I KDI TN +A F G+ E + + NI
Sbjct: 401 DGKTEYVWSKEKLPIDKRT-PYIGNIYLKDIGCTNTQVAAGFMYGLPERKIEKVIMENI 458
>gi|346223719|ref|ZP_08844861.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 567
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I + +G DAI KSG +E G G PT +V ++ ++ G V GSEM
Sbjct: 293 SCKNVLIYNNSFDVGDDAICFKSGKNEDGRRRGMPTENVIVKNNIVYHGHGGFVV-GSEM 351
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI---NVAFGAC--GN 115
SGG+ NV V K + G+ F++T+GRGG ++ I ISD ++ +I + F GN
Sbjct: 352 SGGVRNVHVSKCTFMGTDTGLRFKSTRGRGGVVENIYISDIDMIDIPTEPIRFNLFYEGN 411
Query: 116 C-------GSHPDDDF-DPDAL----PAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 163
S P ++ +P + P+ I K+I AG F G+ E N+
Sbjct: 412 APVLDDGGNSVPSGEWSEPQPVTEETPSFRNIFMKNIRAHGFGNAGFFMGLPEMNLQNVH 471
Query: 164 LSNISL 169
L N L
Sbjct: 472 LENALL 477
>gi|311748289|ref|ZP_07722074.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
gi|126576785|gb|EAZ81033.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
Length = 557
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 84/186 (45%), Gaps = 18/186 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I + +G DAI KSG D G G PT +V ++ ++ G GSEM
Sbjct: 285 SCKNVLIYNNTFDVGDDAICFKSGKDSDGRERGMPTENVIVKNNIVYHGHGG-FTVGSEM 343
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI---NVAFGA--CGN 115
SGGI NV V + G+ F++T+GRGG ++ I IS + NI + F GN
Sbjct: 344 SGGIKNVHVSNCTFMGTDVGLRFKSTRGRGGVVENIWISKINMINIPAEAIRFNMFYSGN 403
Query: 116 C-----GSHPDDDFDPDAL-------PAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 163
+ +D+ + L P+ I KDI T +A F G+ E N+
Sbjct: 404 APVLEEDQNAEDEARKEELAPVTEETPSFRNIFMKDIQVTGSGVAAFFMGLPEMKLQNVK 463
Query: 164 LSNISL 169
L N L
Sbjct: 464 LENAVL 469
>gi|284172853|ref|YP_003406235.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
gi|284017613|gb|ADB63562.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
Length = 541
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 3/171 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V I D I G DAI +KSG + G G P + + + +++ G V GSEM
Sbjct: 242 SSRYVRISDTYINAGDDAICIKSGKNAEGREVGEPASQITVTNCTVEAGHGG-VVIGSEM 300
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + +V V D+ G+ +T + RGG ++ + + + I F G
Sbjct: 301 SGDVRDVTVSNCTFTDTDRGVRIKTARDRGGVVEDLRFDNIVMRRIACPFTINGYYFMPL 360
Query: 121 DDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
D D +P + P + ++F +I + AG F G+ E F I +++ +
Sbjct: 361 DSDSEPVDEGTPMVRNVSFTNITARQVETAGFFAGLPEQYFEGISFNDVQI 411
>gi|436837106|ref|YP_007322322.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
gi|384068519|emb|CCH01729.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
Length = 777
Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats.
Identities = 56/189 (29%), Positives = 83/189 (43%), Gaps = 16/189 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N +E+C G D I++KSG DE G G PT + IR + + G V GSEM
Sbjct: 506 SCRNGLLENCTFDTGDDGITIKSGRDEEGRKRGVPTENFIIRDCRVYQAHGGFV-IGSEM 564
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI---NVAFGACGNCG 117
SGG+ N+ V + G+ F+T +GRGG ++ I +++ + I + F
Sbjct: 565 SGGVRNMYVSNCQFMGTDVGLRFKTARGRGGVVENIYVNNISMTQIAGEAILFDMYYAAK 624
Query: 118 SHPDDDFDPDALPAID-------QITFKDIIGTNITIAGNFTGI-----QEAPFANICLS 165
D + LP I+ F+ N++ G TGI E P +NI +
Sbjct: 625 DPVPQAGDKNELPTIEGKPLNEGTPRFRSFFVHNVSCLGAETGILIRGLPEMPVSNILIE 684
Query: 166 NISLLINPG 174
N L G
Sbjct: 685 NAVLQTRKG 693
>gi|423298602|ref|ZP_17276658.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
gi|392662345|gb|EIY55906.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
Length = 446
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEM 306
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 307 SGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKM 366
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ + P + + TN+ G++EAP ++I L +I +
Sbjct: 367 PAEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI 415
>gi|448419310|ref|ZP_21580352.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
gi|445675300|gb|ELZ27833.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
Length = 541
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 3/171 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V + D I G DAI LKSG DE G GRPT +V + ++ G V GSE
Sbjct: 235 SSRFVRVSDTHIDAGDDAICLKSGKDEEGREVGRPTENVVVTNCTVEHGHG-GVVVGSET 293
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
+G + +V V D+ GI ++ +GRGG ++ + + + F G +
Sbjct: 294 AGDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVLNGYYQTDI 353
Query: 121 DDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
D D P +A P + + F I + A G+ E F I +++ +
Sbjct: 354 DSDPKPVDEATPNVRNVNFHHITAEEVESAAFLAGLPERRFEGISFTDVDI 404
>gi|386727675|ref|YP_006194001.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
gi|384094800|gb|AFH66236.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
Length = 505
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC +G D + LKSG DE G GRPT +V + + G V GSE
Sbjct: 220 SCSNVRISDCHFDVGDDCLCLKSGIDEDGRRVGRPTENVAVTNCTMLHGHG-GVVLGSET 278
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
+GGI NV + + GI +T + RGG ++ + IS+ + ++ A H
Sbjct: 279 AGGIRNVTISNCIFIGTDRGIRIKTNRARGGGVENVRISNIYMEDVLCPL-AINAFYKHG 337
Query: 121 DDDFDP-----------DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 168
D+ +P + P I I D+ N A F G+ E P ++ L +++
Sbjct: 338 IDESNPLLTSPEAVPVTEGTPVIRHIQISDVTAKNARAAAGFIYGLPEMPIEDVALRHVT 397
Query: 169 L 169
Sbjct: 398 F 398
>gi|423213419|ref|ZP_17199948.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
gi|392693879|gb|EIY87109.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
Length = 450
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEM 306
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 307 SGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKM 366
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ + P + + TN+ G++EAP ++I L +I +
Sbjct: 367 PAEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI 415
>gi|159040816|ref|YP_001540068.1| glycoside hydrolase [Caldivirga maquilingensis IC-167]
gi|157919651|gb|ABW01078.1| glycoside hydrolase family 28 [Caldivirga maquilingensis IC-167]
Length = 462
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V + C+I +G D + +KSG DE G G P+ ++H L++ G V GSEM
Sbjct: 247 SSSDVEVRGCMIDVGDDCLVIKSGRDEEGRRIGIPSENIHASGCLMKRGHGGFV-IGSEM 305
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV ++ + G+ +TT+GRGG I+ + +++ +Y N+ A +
Sbjct: 306 SGGVRNVSIQDSVFDGTERGVRIKTTRGRGGLIENVYVNN--IYMRNIIHEAVVVDMFYE 363
Query: 121 DDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSY-- 176
+P + P I + ++ A G+ E P +I + N + N G +
Sbjct: 364 KRPVEPVSERTPKIRGVVIRNTSCDGADQAVLINGLPEMPIEDIIIENTRITSNKGIHIE 423
Query: 177 --NSWECSNIHGSSESV 191
+S SN+ +S ++
Sbjct: 424 NASSIRLSNVKVNSRAI 440
>gi|299145498|ref|ZP_07038566.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298515989|gb|EFI39870.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 450
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEM 306
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 307 SGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKM 366
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ + P + + TN+ G++EAP ++I L +I +
Sbjct: 367 PAEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI 415
>gi|372281193|ref|ZP_09517229.1| polygalacturonase-like protein [Oceanicola sp. S124]
Length = 861
Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 17/191 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYG-----RPTTDVHIRRVLLQSSSGSSVA 55
S +V + ++G D I++KSG G G PT +H+ L++ G V
Sbjct: 275 SCTDVTLAGIHFSVGDDCIAVKSGKRGTGALKGLAGHLAPTRRLHVHHCLMERGHGGMV- 333
Query: 56 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV-----AF 110
GSEMSG I++V V + G+ +T +GRGG + ++ SD + + AF
Sbjct: 334 LGSEMSGDITDVTVTACEFIGTDRGLRIKTRRGRGGEVARVHFSDVLMQGVGTPLAINAF 393
Query: 111 GACGNCGSHPD-DDFDP----DALPAIDQITFKDIIGTNITI-AGNFTGIQEAPFANICL 164
C G P+ P + P I ITF D+I T++ + A G+ EAP + L
Sbjct: 394 YYCDPDGRSPEVQSRSPAPVDETTPKIHDITFSDVIATDVPVCAVAVLGLPEAPVTGVRL 453
Query: 165 SNISLLINPGS 175
N ++P +
Sbjct: 454 KNFRASLDPSA 464
>gi|332666314|ref|YP_004449102.1| polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
gi|332335128|gb|AEE52229.1| Polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
Length = 778
Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 64/238 (26%), Positives = 99/238 (41%), Gaps = 19/238 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N +E C G D I +KSG D G G PT ++ +R + G V GSEM
Sbjct: 506 SCRNGLVEGCSFDTGDDGICIKSGRDAEGRKRGVPTENIIVRNCTVFHGHGGFV-IGSEM 564
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGA- 112
SGG+ N+ V + + G+ F+T +GRGG ++ I ++D + NI ++ + A
Sbjct: 565 SGGVRNLFVSDCNFLGTDVGLRFKTARGRGGIVENIYVTDINMTNIPGEAILFDMYYMAK 624
Query: 113 -----CGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLS 165
G P+ +P + P K+I+ G+ E P NI +
Sbjct: 625 DPVSLNGEKNVLPEMKAEPLGEGTPQFRNFHIKNIVCQGAETGILIRGLPEMPIKNISIE 684
Query: 166 NISLLINPGSYNSWECSNIHGSSESVFPEPCPELENSSSNSSSTCFSLIRYYGRASFL 223
N ++ N G E NI + +F + ++ NS IRY G L
Sbjct: 685 NANITCNQGLV-CVESENIRLKNIGLFTQEKRVMQ--VQNSQKVTLDGIRYQGPVDLL 739
>gi|295084333|emb|CBK65856.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 430
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 223 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEM 281
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 282 SGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKM 341
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ + P + + TN+ G++EAP ++I L +I +
Sbjct: 342 PAEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI 390
>gi|260642326|ref|ZP_05415427.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622463|gb|EEX45334.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 456
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 258 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEM 316
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 317 SGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKM 376
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ + P + + TN+ G++EAP ++I L +I +
Sbjct: 377 PAEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI 425
>gi|237720811|ref|ZP_04551292.1| polygalacturonase [Bacteroides sp. 2_2_4]
gi|229449646|gb|EEO55437.1| polygalacturonase [Bacteroides sp. 2_2_4]
Length = 455
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEM 306
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 307 SGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKM 366
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ + P + + TN+ G++EAP ++I L +I +
Sbjct: 367 PAEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI 415
>gi|294645183|ref|ZP_06722905.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808093|ref|ZP_06766866.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|292639470|gb|EFF57766.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444734|gb|EFG13428.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 455
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEM 306
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 307 SGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKM 366
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ + P + + TN+ G++EAP ++I L +I +
Sbjct: 367 PAEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI 415
>gi|298481339|ref|ZP_06999532.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298272543|gb|EFI14111.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 464
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 257 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEM 315
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 316 SGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKM 375
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ + P + + TN+ G++EAP ++I L +I +
Sbjct: 376 PAEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI 424
>gi|397691340|ref|YP_006528594.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
gi|395812832|gb|AFN75581.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
Length = 495
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 26/189 (13%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC +G DAI +KSG +E+G G PT +V I ++ G GSEM
Sbjct: 225 SCKNVVIYDCKFDVGDDAICMKSGKNEFGRKRGIPTENVIIADCIVYHGHGG-FTIGSEM 283
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ N++V + + G+ F++T+GRGG ++ I I + + +I N+ +G
Sbjct: 284 SGGVRNIKVTNCNFIGTDIGLRFKSTRGRGGVVENIYIDNIYMKDIPTEALSFNMYYG-- 341
Query: 114 GNCGSHPDDD------FDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFA 160
G P +D + +D+ T F++I +I G G+ E
Sbjct: 342 ---GQAPTEDIPLAEKLKNRKVLNVDETTPQFRNIFLNDIYCIGAEDAVIIQGLPEMKIK 398
Query: 161 NICLSNISL 169
NI L+N+ +
Sbjct: 399 NIVLNNVVM 407
>gi|167764884|ref|ZP_02437005.1| hypothetical protein BACSTE_03276 [Bacteroides stercoris ATCC
43183]
gi|167697553|gb|EDS14132.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 550
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 19/184 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + I G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 311 SCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 369
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ N+ V + G+ F++T+GRGG ++ I I + + +I ++ +G
Sbjct: 370 SGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHMIDIPHEALLFDLFYGGK 429
Query: 114 GNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G ++D A+ Q+T F+DI +NI G+ F G+ E P N+
Sbjct: 430 A-AGEETEEDLKGRMKTAVPQVTVETPSFRDIHISNIICKGSGRAMFFNGLPEMPIRNVT 488
Query: 164 LSNI 167
+ ++
Sbjct: 489 VKDV 492
>gi|379724921|ref|YP_005317052.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
gi|378573593|gb|AFC33903.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
Length = 506
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC +G D + LKSG DE G GRPT +V + + G V GSE
Sbjct: 221 SCSNVRISDCHFDVGDDCLCLKSGIDEDGRRVGRPTENVAVTNCTMLHGHG-GVVLGSET 279
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
+GGI NV + + GI +T + RGG ++ + IS+ + ++ A H
Sbjct: 280 AGGIRNVTISNCIFIGTDRGIRIKTNRARGGGVENVRISNIYMEDVLCPL-AINAFYKHG 338
Query: 121 DDDFDP-----------DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 168
D+ +P + P I I D+ N A F G+ E P ++ L +++
Sbjct: 339 IDESNPLLTSPEAVPVTEGTPVIRHIQISDVTAKNARAAAGFIYGLPEMPIEDVALRHVT 398
Query: 169 L 169
Sbjct: 399 F 399
>gi|448567657|ref|ZP_21637582.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
gi|445711655|gb|ELZ63445.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
Length = 549
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 3/171 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V + D I G DAI LKSG DE G GRPT +V + ++ G V GSE
Sbjct: 249 SSRFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCTVEHGHG-GVVIGSET 307
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
+G + +V V D+ GI ++ +GRGG ++ + + + F G +
Sbjct: 308 AGDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIIMRRVACPFVINGYYQTDI 367
Query: 121 DDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
D D P +A P + + F I + A G+ E F I +++ +
Sbjct: 368 DSDPKPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDI 418
>gi|262408002|ref|ZP_06084550.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|293369111|ref|ZP_06615706.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336416263|ref|ZP_08596599.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345511524|ref|ZP_08791064.1| polygalacturonase [Bacteroides sp. D1]
gi|423286902|ref|ZP_17265753.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
gi|262354810|gb|EEZ03902.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|292635823|gb|EFF54320.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335938994|gb|EGN00873.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345454069|gb|EEO49839.2| polygalacturonase [Bacteroides sp. D1]
gi|392674440|gb|EIY67888.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
Length = 450
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEM 306
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 307 SGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKM 366
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ + P + + TN+ G++EAP ++I L +I +
Sbjct: 367 PVEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI 415
>gi|332715898|ref|YP_004443364.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
gi|325062583|gb|ADY66273.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
Length = 531
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGW-----DEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 55
S NV I ++G D I++K+G ++ +A R V +R L++ G V
Sbjct: 291 SCRNVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAETR---GVSVRHCLMERGHGGLV- 346
Query: 56 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGN 115
GSEMSGG+ +V VE + + G+ +T +GRGG + I + L ++ A A N
Sbjct: 347 IGSEMSGGVHDVTVEDCDMVGTDRGLRLKTRRGRGGSVSNITMRRVLLDGVHTALSA--N 404
Query: 116 CGSHPDDD--------FDP----DALPAIDQITFKDIIGTNIT-IAGNFTGIQEAPFANI 162
H D D DP D P ID IT +D+ ++ AG F G+ EAP NI
Sbjct: 405 AHYHCDADGHDGWVQSRDPAPVDDGTPFIDGITVEDVEIRHLAHAAGVFLGLPEAPIRNI 464
Query: 163 CLSNISLL 170
+ N++++
Sbjct: 465 AIRNLTIV 472
>gi|292494258|ref|YP_003533401.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|448289466|ref|ZP_21480637.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|291369174|gb|ADE01404.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|445582547|gb|ELY36888.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
Length = 549
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 3/171 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V + D I G DAI LKSG DE G GRPT +V + ++ G V GSE
Sbjct: 249 SSRFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCTVEHGHG-GVVIGSET 307
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
+G + +V V D+ GI ++ +GRGG ++ + + + F G +
Sbjct: 308 AGDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIIMRRVACPFVINGYYQTDI 367
Query: 121 DDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
D D P +A P + + F I + A G+ E F I +++ +
Sbjct: 368 DSDPKPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDI 418
>gi|336402515|ref|ZP_08583249.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
gi|335948128|gb|EGN09853.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
Length = 455
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEM 306
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 307 SGSVCKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKM 366
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ + P + + TN+ G++EAP ++I L +I +
Sbjct: 367 PAEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI 415
>gi|160886115|ref|ZP_02067118.1| hypothetical protein BACOVA_04122 [Bacteroides ovatus ATCC 8483]
gi|156108928|gb|EDO10673.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 459
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 257 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEM 315
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 316 SGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKM 375
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ + P + + TN+ G++EAP ++I L +I +
Sbjct: 376 PVEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHI 424
>gi|448581096|ref|ZP_21645086.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
gi|445733858|gb|ELZ85418.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
Length = 512
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 3/171 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V + D I G DAI LKSG DE G GRPT +V + ++ G V GSE
Sbjct: 212 SSRFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCTVEHGHG-GVVIGSET 270
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
+G + +V V D+ GI ++ +GRGG ++ + + + F G +
Sbjct: 271 AGDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDI 330
Query: 121 DDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
D + +P +A P + + F I + A G+ E F I +++ +
Sbjct: 331 DSEPEPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDI 381
>gi|329925656|ref|ZP_08280474.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
gi|328939683|gb|EGG36026.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
Length = 523
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 5 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGI 64
V +E+ +G DAI LKSG +E G G+P+ + IR + G + GSEMSGGI
Sbjct: 260 VTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERIRIRNCTVYHGHGG-IVVGSEMSGGI 318
Query: 65 SNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGACGNCG 117
+V V + GI F++ +GRGG ++ I+I + +I N+ + G
Sbjct: 319 KDVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRDIDGDAISFNLYYEGKAGSG 378
Query: 118 SHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
+ ++ P + P I +DI+ + A G+ E P N+ +
Sbjct: 379 EYQEEVMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMPVENLTVKR 429
>gi|330836022|ref|YP_004410663.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
gi|329747925|gb|AEC01281.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
Length = 459
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 10/193 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V + C++ +G D I+LKSG GIA GRPT +V + ++S+ G + GSE
Sbjct: 219 SCQDVMVTGCLVDVGDDGIALKSGSGPDGIAAGRPTRNVRVSGCTVRSAHG-GIVIGSET 277
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYN--INVAFGACGNCGS 118
+ GIS + E + GI +T +GRGG I + + N +A CG+
Sbjct: 278 AAGISGLVAEDCLFDGTDRGIRIKTRRGRGGAISDLRFERLTMRNNLCPLAINMYYRCGT 337
Query: 119 HPDDDF----DP--DALPAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSNISLLI 171
F +P D P+I I +D + T + F G+ E P + + + S +
Sbjct: 338 TEGSLFSLSPEPIDDTTPSIGNILVRDCVATGSQASAGFIVGLPERPITELVVEDSSFGV 397
Query: 172 NPGSYNSWECSNI 184
P S S + S++
Sbjct: 398 MPESNVSTDESDM 410
>gi|317474867|ref|ZP_07934137.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909005|gb|EFV30689.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 445
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D GRP ++ I + S G V GSEM
Sbjct: 247 SCSNVHISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNCTMLSGHGG-VVIGSEM 305
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ V + + GI ++T+GRGG ++ I +S+ + +I S
Sbjct: 306 SGGVKKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSDIKREAVVLNLKYSQM 365
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFT-----GIQEAPFANICLSNI 167
+ + P F++I T +T+ G T G+ EAP I +I
Sbjct: 366 KMEKKSERTPV-----FRNIFVTGLTVRGTQTPLKVDGLPEAPIEGIVFRDI 412
>gi|218129085|ref|ZP_03457889.1| hypothetical protein BACEGG_00659 [Bacteroides eggerthii DSM 20697]
gi|217988720|gb|EEC55039.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 445
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D GRP ++ I + S G V GSEM
Sbjct: 247 SCSNVHISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNCTMLSGHGG-VVIGSEM 305
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ V + + GI ++T+GRGG ++ I +S+ + +I S
Sbjct: 306 SGGVKKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSDIKREAVVLNLKYSQM 365
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFT-----GIQEAPFANICLSNI 167
+ + P F++I T +T+ G T G+ EAP I +I
Sbjct: 366 KMEKKSERTPV-----FRNIFVTGLTVRGTQTPLKVDGLPEAPIEGIVFRDI 412
>gi|325568850|ref|ZP_08145143.1| hypothetical protein HMPREF9087_1432 [Enterococcus casseliflavus
ATCC 12755]
gi|325157888|gb|EGC70044.1| hypothetical protein HMPREF9087_1432 [Enterococcus casseliflavus
ATCC 12755]
Length = 537
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 88/202 (43%), Gaps = 21/202 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ I D + G D I++KSG + G RP + IR L G +A GSE
Sbjct: 320 SSQNLLIFDTVFDTGDDCIAIKSGKNPEGNQINRPAKN--IRLFDLAIRGGHGIAIGSEQ 377
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN---VAFGACGNCG 117
SGG+ N+ L ++L G+E + RGGYI+Q+ I+D L VA+ A G
Sbjct: 378 SGGVENIAFRDCQLTNTLYGLELKAQNDRGGYIRQVTITDCLLDRFMAHPVAYNADGQAA 437
Query: 118 SHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN 177
LP I DI+ N I G ++ F + +S I ++
Sbjct: 438 QQ---------LPII-----SDILVKNTRIVGQNPLVELKGFVDEQAQQVS-PIQRVTFE 482
Query: 178 SWECSNIHGSSESVFPEPCPEL 199
S + G + +F E C E+
Sbjct: 483 SVAFESAKGQKKMIF-EQCQEI 503
>gi|420263795|ref|ZP_14766431.1| glycoside family 77 [Enterococcus sp. C1]
gi|394769237|gb|EJF49100.1| glycoside family 77 [Enterococcus sp. C1]
Length = 537
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 88/202 (43%), Gaps = 21/202 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ I D + G D I++KSG + G RP + IR L G +A GSE
Sbjct: 320 SSQNLLIFDTVFDTGDDCIAIKSGKNPEGNQINRPAKN--IRLFDLAIRGGHGIAIGSEQ 377
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN---VAFGACGNCG 117
SGG+ N+ L ++L G+E + RGGYI+Q+ I+D L VA+ A G
Sbjct: 378 SGGVENIAFRDCQLTNTLYGLELKAQNDRGGYIRQVTITDCLLDRFMAHPVAYNADGQAA 437
Query: 118 SHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN 177
LP I DI+ N I G ++ F + +S I ++
Sbjct: 438 QQ---------LPII-----SDILVKNTRIVGQNPLVELKGFVDEQAQQVS-PIQRVTFE 482
Query: 178 SWECSNIHGSSESVFPEPCPEL 199
S + G + +F E C E+
Sbjct: 483 SVAFESAKGQKKMIF-EQCQEI 503
>gi|261406667|ref|YP_003242908.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283130|gb|ACX65101.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 523
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 5 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGI 64
V +E+ +G DAI LKSG +E G G+P+ + IR + G + GSEMSGGI
Sbjct: 260 VTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCTVYHGHGG-IVVGSEMSGGI 318
Query: 65 SNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGACGNCG 117
+V V + GI F++ +GRGG ++ I+I + +I N+ + G
Sbjct: 319 KDVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRDIDGDAISFNLYYEGKAGSG 378
Query: 118 SHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
+ ++ P + P I +DI+ + A G+ E P N+ +
Sbjct: 379 EYQEEVMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMPVENLTVKR 429
>gi|408376656|ref|ZP_11174260.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
gi|407749346|gb|EKF60858.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
Length = 503
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 32/230 (13%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ + I++G D +++K+G + RPT +V IR L+Q G+ V GSEM
Sbjct: 278 SSQNIRLVGLDISVGDDCVAIKAGKRDPRGGPDRPTRNVEIRNCLMQRGHGA-VVMGSEM 336
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN--VAFGACGNCGS 118
S GIS+V + + H + + G+ +T +GRGG + +I + D + ++ +A A C +
Sbjct: 337 SQGISDVSISRCHFFGTDRGLRIKTRRGRGGTVSKISVHDCRMEDVATPIAVNAFYFCDA 396
Query: 119 HPDDDF--DPDALPAIDQITFKDIIGTNI---------TIAGNFTGIQEAPFANICLSNI 167
D+ ALP +T I G +I T A F G+ E+ + + +
Sbjct: 397 DGRSDYVQSRTALPV--SLTTPKIEGIDIRNLEVSGAETAAAVFYGLPESTIDAVSIDGM 454
Query: 168 SLLINPGSYNSWECSNIHGSSESVFPEPC---PELENSSSNSSSTCFSLI 214
S+ +Y++ ++ PE PEL ++ + +T FS I
Sbjct: 455 SI-----AYSA--------DAKPAVPEMACHLPELRHAGIIAENTNFSRI 491
>gi|373955264|ref|ZP_09615224.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373891864|gb|EHQ27761.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 549
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N IE+ +G D I +KSG DE G G+PT +V +R ++ + G V GSEM
Sbjct: 276 SSTNTLIENSTFDVGDDGICIKSGRDEAGRKLGKPTENVIVRNCVVYHAHGGFV-IGSEM 334
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI 106
SGG N+ V + G+ F+TT+GRGG ++ I +++ + +I
Sbjct: 335 SGGAKNIFVYNCSFLGTDVGLRFKTTRGRGGVVQNIYVTNINMKDI 380
>gi|395212459|ref|ZP_10399800.1| glycoside hydrolase [Pontibacter sp. BAB1700]
gi|394457168|gb|EJF11353.1| glycoside hydrolase [Pontibacter sp. BAB1700]
Length = 582
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 26/194 (13%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + +G DAI +KSG D++G G PT +V ++ ++ G V GSEM
Sbjct: 310 SCKNSVIYNNTFDVGDDAICIKSGKDQHGRDRGIPTENVIVKNNVVYHGHGGFVV-GSEM 368
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
S G+ NV V + G+ F++T+GRGG ++ I IS+ ++ NI N+ +G
Sbjct: 369 SSGVKNVHVSNCTFIGTDIGLRFKSTRGRGGVVENIYISNIDMINIPTQAISFNLFYG-- 426
Query: 114 GNCGSHPDDDF-------DPDALPAIDQI-TFKDIIGTNITIAG-----NFTGIQEAPFA 160
G+ P D + +P ++ +FKDI NI +AG G+ E
Sbjct: 427 ---GNSPTMDAEQGGAKKEEKLMPVTEETPSFKDIYMKNIRVAGADEALALQGLPEMNLQ 483
Query: 161 NICLSNISLLINPG 174
N+ + N L G
Sbjct: 484 NVNIENAVLKAKKG 497
>gi|29346428|ref|NP_809931.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338324|gb|AAO76125.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
Length = 445
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEM 306
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 307 SGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQM 366
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ + P + + T++ G++EAP ++I L +I +
Sbjct: 367 PAEAKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHI 415
>gi|354581296|ref|ZP_09000200.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
gi|353201624|gb|EHB67077.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
Length = 522
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 10/169 (5%)
Query: 5 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGI 64
V +E+ +G DAI LKSG +E G G+P+ + IR + G + GSEMSGGI
Sbjct: 259 VTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCTVYHGHGG-IVVGSEMSGGI 317
Query: 65 SNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVIS-------DAELYNINVAFGACGNCG 117
+V V + + GI F++ +GRGG ++ I I D + + N+ + G
Sbjct: 318 KDVHVSDCNFIGTDIGIRFKSCRGRGGVVENIFIERIRMREIDGDAISFNLYYEGKAGSG 377
Query: 118 SHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICL 164
+ + P + P I +DI+ + A G+ E P N+ +
Sbjct: 378 EYQAEAMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMPVENVTV 426
>gi|266624154|ref|ZP_06117089.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864021|gb|EFC96319.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 509
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N I C G D+I++KSG + G RP+ HIR + + G + GSEM
Sbjct: 305 SSTNCTIFGCTFNTGDDSIAIKSGKNPEGNEISRPSE--HIRIFDCKCAMGRGITIGSEM 362
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI++VQ+ + S +GIE + TK RGGY+K + + D+ I F + G +
Sbjct: 363 SGGINDVQIWDCDISSSRHGIEIKGTKKRGGYVKNVKVRDSRTARI--LFHSVG----YN 416
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIA 148
DD P ++ F++I T ++++
Sbjct: 417 DDGAGAPKPPVFEKCIFENIDVTGMSLS 444
>gi|329957634|ref|ZP_08298109.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328522511|gb|EGF49620.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 533
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 19/184 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + I G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 293 SCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 351
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ N+ V + G+ F++T+GRGG ++ I I + + +I ++ +G
Sbjct: 352 SGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHMIDIPHEPLLFDLFYGGK 411
Query: 114 GNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G ++D + Q+T F+DI +NI G+ F G+ E P N+
Sbjct: 412 A-AGEETEEDLKGRMKTTVPQVTVETPSFRDIHISNIICKGSGRAMFFNGLPEMPIKNVT 470
Query: 164 LSNI 167
+ ++
Sbjct: 471 VKDV 474
>gi|418409920|ref|ZP_12983231.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
gi|358003969|gb|EHJ96299.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
Length = 523
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 90/188 (47%), Gaps = 24/188 (12%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGW-----DEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 55
S NV I ++G D I++K+G ++ +A T V +R L++ G V
Sbjct: 283 SCRNVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAE---TRGVSVRHCLMERGHGGLV- 338
Query: 56 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGN 115
GSEMSGG+ NV VE + + G+ +T +GRGG + + + L + A A N
Sbjct: 339 IGSEMSGGVHNVTVEDCDMVGTDRGLRLKTRRGRGGSVSNVTMRRVLLDGVQTALSA--N 396
Query: 116 CGSHPDDD--------FDPDAL----PAIDQITFKDIIGTNIT-IAGNFTGIQEAPFANI 162
H D D DP + P ID IT +D+ ++ AG F G+ EAP NI
Sbjct: 397 AHYHCDADGHDGWVQSRDPAPVDYGTPFIDGITVEDVEIRHLAHAAGVFLGLPEAPIRNI 456
Query: 163 CLSNISLL 170
+ N++++
Sbjct: 457 AIRNLTIV 464
>gi|409100257|ref|ZP_11220281.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 557
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 16/189 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE +G D I +KSG DE G G+PT +V IR ++ + G V GSEM
Sbjct: 283 SCKNVLIEGSTFDVGDDGICIKSGRDEAGRKRGKPTENVIIRNNVVYHAHGGFVV-GSEM 341
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGA- 112
SGG N+ V + GI F+TT+GRGG ++ I I++ + +I ++ + A
Sbjct: 342 SGGAKNIWVYDCSFIGTDIGIRFKTTRGRGGVVEDIYINNINMIDIPGEAILFDMYYAAV 401
Query: 113 -----CGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLS 165
G P +A P I KD++ A G+ E +I L
Sbjct: 402 DPIVLAGEKREAIKTVVVPVTEATPQFKNIYIKDVVANGAEKAIFVRGLPEMNIKDIYLE 461
Query: 166 NISLLINPG 174
N+++ G
Sbjct: 462 NVTIQAKKG 470
>gi|399032800|ref|ZP_10732032.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398068822|gb|EJL60216.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 456
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 7/182 (3%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S NV IE+CI G DAI++KSG ++ + ++ +R +++ VA GSE+S
Sbjct: 264 SQNVLIENCIFDQGDDAIAIKSGSNQDAWRLNTSSKNIVMRNCTVKNGH-QLVAIGSELS 322
Query: 62 GGISNVQVEKIHLYD--SLNGIEF-RTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS 118
GGI NV ++ + D LN + F +T + RGGY+ I +S+ I+
Sbjct: 323 GGIENVFIDNCTVVDGAKLNHLLFIKTNERRGGYVSNIYMSNIVSGKIDAGILGIDTDVL 382
Query: 119 HPDDDFDP---DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGS 175
+ D P L I I +I TN+ +G +E P NI L N+++ + G
Sbjct: 383 YQWRDLVPTIERRLTPIKNIYLDNIKATNVKFISKISGQKELPVENIFLKNVTVDVVQGD 442
Query: 176 YN 177
N
Sbjct: 443 QN 444
>gi|383113004|ref|ZP_09933785.1| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
gi|382948911|gb|EFS29452.2| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
Length = 444
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEM 306
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 307 SGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKM 366
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ + P + + T++ G++EAP ++I L +I +
Sbjct: 367 PAEPKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHI 415
>gi|255034418|ref|YP_003085039.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254947174|gb|ACT91874.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 528
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 81/174 (46%), Gaps = 9/174 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IE C ++ G D ++K+G E GI +PT +V IR L + G + GSE
Sbjct: 277 SSRNVLIEYCTLSSGDDCFTIKAGRGEDGIRVNKPTENVVIRHCLAREGHG-GITCGSET 335
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAE--LYNINVAFGACGNCG- 117
+G I NV V D+ G+ F+T + R G + IV + L V F G+
Sbjct: 336 AGMIRNVYVRDCVFDDTDTGLRFKTRRSRAGGGENIVYENIRMNLRGDAVKFDMLGSRQY 395
Query: 118 -SHPDDDFDP----DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
D P D PA IT ++I+ + TGI E+P AN+ + N
Sbjct: 396 VGELADRLPPRPVNDLTPAYRNITARNIVVDKARTFIDITGIPESPAANLLIEN 449
>gi|317475267|ref|ZP_07934533.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
gi|316908521|gb|EFV30209.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
Length = 533
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 19/184 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + I G DAI +KSG D+ G G P +V ++ + G V GSEM
Sbjct: 293 SCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKNNTVLHGHGGFVV-GSEM 351
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ N+ V + G+ F++T+GRGG ++ I I + + +I ++ +G
Sbjct: 352 SGGVKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHMIDIPHEPLLFDLFYGGK 411
Query: 114 GNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G ++D +I ++T F+DI +NI G+ F G+ E P N+
Sbjct: 412 A-AGEETEEDLKSRMKASIPEVTVETPSFRDIHISNIICKGSGRAMFFNGLPEMPIRNVT 470
Query: 164 LSNI 167
+ N+
Sbjct: 471 VKNV 474
>gi|325298782|ref|YP_004258699.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
gi|324318335|gb|ADY36226.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
Length = 535
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 17/184 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR-RVLLQSSSGSSVAFGSE 59
S + V + + G D I +KSG DE G G P ++ IR V+L G V GSE
Sbjct: 296 SCNRVLVLNSSFDAGDDGICIKSGKDESGRRRGEPCQNIIIRDNVVLHGHGGFVV--GSE 353
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK---------QIVISDAELYNINVAF 110
MSGG+ N+ V+ + G+ F++T+GRGG ++ + ++A ++++
Sbjct: 354 MSGGVKNIYVDNCTFLGTDVGLRFKSTRGRGGVVENIHINNINMINIPNEALIFDLFYGG 413
Query: 111 GAC--GNCGSHPDDDFDP---DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLS 165
A G+ P ++ P + PA I K++ N+ A F G+ E P NI L
Sbjct: 414 NAPGEGDAPGAPKEEVVPPVTEETPAFRDIFIKNVTAKNVGRAVLFNGLPEMPIKNIFLE 473
Query: 166 NISL 169
N+++
Sbjct: 474 NVTI 477
>gi|326799707|ref|YP_004317526.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550471|gb|ADZ78856.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 517
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 2/174 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C I++G D I++KSG D G RP + I + S G V GSEM
Sbjct: 236 SCSNVHISNCHISVGDDCITIKSGKDRSGRKEARPAENYTITNCTMLSGHGG-VVIGSEM 294
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + + + + GI +T +GRGG ++ I +S+ + NI +
Sbjct: 295 SGDVKKIVISNCIFDGTDRGIRIKTARGRGGVVEDIQVSNIVMKNIKQQAIVLDMQYAKT 354
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPG 174
D + + P I +I AG G++E P N+ SN+ + G
Sbjct: 355 DREPVSERTPRFSNIHLSNITAQG-EQAGYLNGLEEMPIENVSFSNMVMETKTG 407
>gi|312130362|ref|YP_003997702.1| glycoside hydrolase [Leadbetterella byssophila DSM 17132]
gi|311906908|gb|ADQ17349.1| glycoside hydrolase family 28 [Leadbetterella byssophila DSM 17132]
Length = 775
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 7 IEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISN 66
++ C G DAI+LKSG DE G G PT +V I+ + G V GSEMSGG+ N
Sbjct: 512 VDGCTFDTGDDAITLKSGRDEQGRKRGVPTENVIIKNTTVFHGHGGFV-IGSEMSGGVKN 570
Query: 67 VQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI 106
V V+ + G+ F+T + RGG ++ I IS+ + NI
Sbjct: 571 VFVDNCSFLGTDIGLRFKTKRDRGGVVENIYISNIAMNNI 610
>gi|325105433|ref|YP_004275087.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974281|gb|ADY53265.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 569
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+ +G D I +KSG DE G PT DV +R ++ + G V GSEM
Sbjct: 296 SCKNVLIENSTFDVGDDGICIKSGRDEAGRKRAMPTEDVIVRNNVVYHAHGGFV-IGSEM 354
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGA- 112
SGG N+ V + G+ F+TT+GRGG ++ + I+++ + +I ++ + A
Sbjct: 355 SGGAKNLYVYNNSFIGTDIGLRFKTTRGRGGIVENVYIANSYMKDIPGDAILFDMYYEAK 414
Query: 113 -----CGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLS 165
G P +F P +A P K+++ GI E NI L
Sbjct: 415 DPVPLAGEKRPAPVAEFKPVTEATPQFKNFYIKNVVCNGADKGLFVRGIPEMNVQNIYLE 474
Query: 166 NISL 169
+++L
Sbjct: 475 DLTL 478
>gi|326797927|ref|YP_004315746.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548691|gb|ADZ77076.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 455
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 7/173 (4%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S NV IE+C+ G DAI++KSG + G P+ ++ IR +++ +A GSE+S
Sbjct: 264 SQNVLIENCVFDQGDDAIAIKSGRNPEGWRLKAPSKNIIIRNCTVKNGH-QLIAIGSELS 322
Query: 62 GGISNVQVEKIHLYD--SLNGIEF-RTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS 118
GGI NV V+ + D LN + F +T + GGY++ I S+ + I +
Sbjct: 323 GGIENVFVDSCVVMDGAKLNHLLFIKTNERMGGYVRNIYASNLQAGRIELGILGIETDVL 382
Query: 119 HPDDDFDPDA---LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNIS 168
+ + P L I + ++ N+ G +E P NI L N+
Sbjct: 383 YQWRNLVPTVERRLTPIKDVYLNNVTAKNVQFVSRILGQKELPIENIVLKNVE 435
>gi|393201099|ref|YP_006462941.1| endopolygalacturonase [Solibacillus silvestris StLB046]
gi|327440430|dbj|BAK16795.1| endopolygalacturonase [Solibacillus silvestris StLB046]
Length = 449
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 88/183 (48%), Gaps = 14/183 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I +G D I++K+G ++ A P ++ I + G V FGSEM
Sbjct: 193 SCRNVKISDCSIDVGDDCIAIKAGTEDAERAI--PCENITITNCTMLHGHGG-VVFGSEM 249
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF-----GACGN 115
SG I NV V + GI F++ +GRGG I+ I +++ + N+ F G
Sbjct: 250 SGDIRNVVVSNCIFEGTDRGIRFKSRRGRGGTIENIRVNNIVMNNVICPFILNLYYYHGP 309
Query: 116 CGSHP---DDDFDP-DAL-PAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
G P D + P AL P I F +I T++T A F G+ E P +I S+I +
Sbjct: 310 RGMEPYVWDKEVQPVTALTPKFRHIHFSNITATDVTAAAGFMYGLPEMPVEDITFSHIRI 369
Query: 170 LIN 172
+
Sbjct: 370 AMK 372
>gi|393781526|ref|ZP_10369720.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
gi|392676130|gb|EIY69568.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
Length = 447
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I+LKSG D G P ++ I + S G V GSEM
Sbjct: 249 SCRNVHISDCHISVGDDCITLKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEM 307
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 308 SGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIIMSNIKREAVVLNLKYSEM 367
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ + P I+ + + G++EAP +I L +I++
Sbjct: 368 PVEPMSERTPLFRDISISGLTAVGVKTPVKIVGLEEAPVTDIILRDINV 416
>gi|427384664|ref|ZP_18881169.1| hypothetical protein HMPREF9447_02202 [Bacteroides oleiciplenus YIT
12058]
gi|425727925|gb|EKU90784.1| hypothetical protein HMPREF9447_02202 [Bacteroides oleiciplenus YIT
12058]
Length = 545
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 79/177 (44%), Gaps = 15/177 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IE C + G D +LKSG E G+ GRPT +V IR L Q G + GSE
Sbjct: 278 SSKNVLIEYCTLNCGDDCFTLKSGRGEEGVRIGRPTENVVIRYSLAQQGHG-GITCGSET 336
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF--------GA 112
+G I N+ + +GI F+ + RGG + ++ + ++NVAF
Sbjct: 337 AGNIKNIYAHDCVFNGTWSGIRFKAFRPRGGGTENVLYKRIRMIDVNVAFIWDMLGSRRW 396
Query: 113 CGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTG---IQEAPFANICLSN 166
G+ + + P + I KD I + A NF I E P N+ + N
Sbjct: 397 VGDLANRLPLREVTELTPILRNIHVKDFI---VESADNFISANCIPEIPVNNVLIEN 450
>gi|423299813|ref|ZP_17277838.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
gi|408473622|gb|EKJ92144.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
Length = 450
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEM 306
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 307 SGSVRKVTISNCIFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKREAVVLNLKYSKM 366
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ + P + + T++ G++EAP ++I L +I +
Sbjct: 367 PAEPKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHI 415
>gi|325300479|ref|YP_004260396.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
gi|324320032|gb|ADY37923.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
Length = 493
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 18/201 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + +G D I LKSG DE G RP +V + + G V GSEM
Sbjct: 285 SCRNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVIVDGCTVFKGHGGFVV-GSEM 343
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ NV V + G+ F++ +GRGG ++ I + + + +I N+ +G
Sbjct: 344 SGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWVRNVSMIDIATEPVTFNLYYGGK 403
Query: 114 GNCGSHPDDDFDPDALPA--IDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICL 164
+ P +PA +D+ T F++I +T AG F GI E P I L
Sbjct: 404 SAVEVLESGEVVPAEVPAMPVDETTPCFRNIHIERLTCAGARRAMYFNGIPEMPIDGITL 463
Query: 165 SNISLLINPGSYNSWECSNIH 185
++ + + + C N+H
Sbjct: 464 KHVRIRAREDAEFRY-CKNVH 483
>gi|380695284|ref|ZP_09860143.1| polygalacturonase (Pectinase) [Bacteroides faecis MAJ27]
Length = 438
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 241 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEM 299
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 300 SGSVRKVTISNCVFDGTERGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSPM 359
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ + P + + T++ G++EAP ++I L +I +
Sbjct: 360 PAEPKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHI 408
>gi|409099480|ref|ZP_11219504.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 530
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG DE G P + I + S G V GSEM
Sbjct: 244 SCKNVHISDCHISVGDDCITIKSGKDEPGRRMAIPAENYVITNCTMLSGHGG-VVIGSEM 302
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + + + + GI +T +GRGG +++I +S+ + +I +
Sbjct: 303 SGDVRKITISNCVFDGTDRGIRIKTARGRGGIVEEIRVSNIIMKDIKQQAIVLDMQYAKT 362
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPG 174
+ D P I F +I G + A G++E P NI ++I++ G
Sbjct: 363 NVQPVSDRTPKFRNIHFSNITG-QVNQAAYLNGLEEMPIENITFNDINMEAKTG 415
>gi|413949760|gb|AFW82409.1| hypothetical protein ZEAMMB73_244455 [Zea mays]
Length = 313
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 61/108 (56%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V IEDC I G D +++KSGWDEYGI + P+ + I+R+ S + + +A SEM
Sbjct: 148 SSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIQRLTSVSPTSAMIALSSEM 207
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV 108
SGGI +V+ + ++ + I +T G + + + A L+ + +
Sbjct: 208 SGGIRDVRAKDSVAINTESAIRVKTLGAIAGVLSRNELVAAALFTLAI 255
>gi|383122658|ref|ZP_09943350.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
gi|251842244|gb|EES70324.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
Length = 445
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGG-VVIGSEM 306
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 307 SGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQM 366
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ + P + + T++ G++EAP +I L +I +
Sbjct: 367 PAEAKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPIFDIVLRDIHI 415
>gi|325103049|ref|YP_004272703.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971897|gb|ADY50881.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 526
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 2/174 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C I++G D I++KSG D G P + I + G V GSEM
Sbjct: 241 SCRNVRIANCHISVGDDCITIKSGKDRSGRKVNIPAENYTITNCTMLRGHGG-VVIGSEM 299
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ N+ + + GI ++ +GRGG ++ I +S+ + NI +
Sbjct: 300 SGGVKNIAITNCIFDGTDRGIRIKSARGRGGVVEDIRVSNIIMRNIRDQAIVLDLQYAKT 359
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPG 174
+ + + P I DI + AG G++E P +NI +N+++ N G
Sbjct: 360 NPEPISERTPIFRNIHISDITAST-NRAGYLNGLEELPISNISFNNVNMTANTG 412
>gi|374376182|ref|ZP_09633840.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
gi|373233022|gb|EHP52817.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
Length = 547
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 85/181 (46%), Gaps = 16/181 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+ +G D + +KSG D G PT DV IR + ++ G V GSEM
Sbjct: 274 SCSNVLIENSKFDVGDDGLCMKSGRDADGRKRAMPTKDVIIRGCTVYAAHGGFVV-GSEM 332
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI---NVAFGACGNCG 117
SGG++NV V S G+ F+TT+GRGG ++ I I D + +I V F
Sbjct: 333 SGGVNNVYVSNCTFIGSDIGLRFKTTRGRGGIVENIFIKDIFMKDIPGDAVLFDMYYMAK 392
Query: 118 SHPDDDFDPDALPAIDQIT-------FKDIIGTNITIAGN-----FTGIQEAPFANICLS 165
+ LP ++++ F++I +NI + G G+ E NI +S
Sbjct: 393 DPIALAGEKRELPKVEKLAVDETTPQFRNIQISNIYVNGAQRAVFLRGLPEMAVKNISIS 452
Query: 166 N 166
N
Sbjct: 453 N 453
>gi|167762022|ref|ZP_02434149.1| hypothetical protein BACSTE_00368 [Bacteroides stercoris ATCC
43183]
gi|167700114|gb|EDS16693.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 516
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 86/186 (46%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + +G D I LKSG DE G RP +V + + G V GSEM
Sbjct: 295 SCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCTVFKGHGGFVV-GSEM 353
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ NV V + G+ F++ +GRGG ++ I I++ + +I N+ +G
Sbjct: 354 SGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSMMDIPTEPITFNLYYGGK 413
Query: 114 GNCGSHPDDDFDP---DALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
+ P D LP +D+ T F++I N+ AG F GI E P N+
Sbjct: 414 SAVEVLESGEKVPAKVDPLP-VDETTPCFRNIHVKNLVCAGARRALFFNGIPEMPIENVV 472
Query: 164 LSNISL 169
L ++ +
Sbjct: 473 LEDVDI 478
>gi|404405418|ref|ZP_10997002.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 1278
Score = 71.2 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IEDC G D I++KSG D GRPT +V IR +S + + V GSE+
Sbjct: 250 SCTNVLIEDCTFRTGDDGIAIKSGRDNDAWRIGRPTENVLIRNCSFRSKA-NGVCIGSEI 308
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAE 102
SGG+ NV VE + + D NGI F++ RGGYI+ + + E
Sbjct: 309 SGGVRNVVVENVRMSDVGNGIYFKSNLDRGGYIEDVFVCGVE 350
>gi|337752008|ref|YP_004646170.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
gi|336303197|gb|AEI46300.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
Length = 506
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 14/181 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC +G D + LKSG D G GRPT +V + + G V GSE
Sbjct: 221 SCSNVRISDCHFDVGDDCLCLKSGIDADGRRVGRPTENVAVTNCTMLHGHG-GVVLGSET 279
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
+GGI NV + + GI +T + RGG ++ + IS+ + ++ A H
Sbjct: 280 AGGIRNVTISNCIFIGTDRGIRIKTNRARGGGVENVRISNIYMEDVLCPL-AINAFYKHG 338
Query: 121 DDDFDP-----------DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 168
D+ +P + P I I D+ N A F G+ E P ++ L +++
Sbjct: 339 IDESNPLLTSPEAVPVTEGTPVIRHIQISDVTAKNARAAAGFIYGLPEMPIEDVALRHVT 398
Query: 169 L 169
Sbjct: 399 F 399
>gi|302143794|emb|CBI22655.3| unnamed protein product [Vitis vinifera]
Length = 160
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Query: 82 EFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPDDDFDPDALPAIDQITFKDII 141
E +T RGGY+K I + + + AF G+ G P + P I+ I ++D++
Sbjct: 4 EIKTGLERGGYVKDIYVRRMTMKTMRFAFWIIGDYGPPPAPGHE---GPVIEGINYRDMV 60
Query: 142 GTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSWECSNIHGSSESVFPEPCPELE 200
N+T GI PF C+SN+++ L W+C + G + V P+PC L
Sbjct: 61 ADNVTYPAQLHGISGGPFTGFCISNVTIGLTEESRKQQWDCDEVQGITSRVTPQPCDLLS 120
Query: 201 NSSS 204
S
Sbjct: 121 PSKE 124
>gi|86141409|ref|ZP_01059955.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
gi|85831968|gb|EAQ50423.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
Length = 453
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 7/173 (4%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S NV IE+C+ G DAI++K+G ++ P ++ IR +++ +A GSE+S
Sbjct: 261 SQNVLIENCVFDQGDDAIAVKAGRNQDAWRLNTPVKNIVIRDCSVKNGH-QLLAIGSELS 319
Query: 62 GGISNVQVE--KIHLYDSLNGIEF-RTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS 118
GG+ NV + ++ LN + F +T + RGGY+K I + D + I+
Sbjct: 320 GGVENVYMGNCEVAPNAKLNHLLFIKTNERRGGYVKNIYMEDIKAGRIDKGILGIETDVL 379
Query: 119 HPDDDFDP---DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNIS 168
+ D P L I+Q+ +I N+ G +EAP NI L ++
Sbjct: 380 YQWRDLVPTYERRLTQIEQVNMTNIKAANVDFVSRILGEEEAPVQNISLRKVT 432
>gi|366053529|ref|ZP_09451251.1| polygalacturonase [Lactobacillus suebicus KCTC 3549]
Length = 439
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 90/178 (50%), Gaps = 13/178 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS++V +++C++ +G D ++LKSG E GI +PT +V + + +S G +A GSE
Sbjct: 216 SSEDVTVKNCLLDVGDDGVTLKSGSGEDGIRVNKPTKNVKVSDCRILASHG-GIAIGSET 274
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVIS--DAELYNINVAFGACGNCGS 118
+ GIS+V+V + GI ++ + RGG I+ I +S +L ++ G
Sbjct: 275 AAGISDVEVSNCTFDGTRRGIRLKSRRTRGGTIENINLSGLKMDLCWCPISLEQYFAPGV 334
Query: 119 HPDD-----DFDP----DALPAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSN 166
P++ D P + P I I+ K+I TN+ F G+ EA N+ + N
Sbjct: 335 LPEEEATVLDEGPQPVDETTPHIRNISIKNIKATNVRATAAFIVGLPEANIENVEIEN 392
>gi|160884725|ref|ZP_02065728.1| hypothetical protein BACOVA_02714 [Bacteroides ovatus ATCC 8483]
gi|156109760|gb|EDO11505.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 527
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 80/175 (45%), Gaps = 11/175 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE C + G D +LK+G E G+ G+PT +V IR L Q G V GSE
Sbjct: 258 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQQGHG-GVTCGSET 316
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF-----GACGN 115
+GG+ NV V + GI F+T + R G + + + N+ AF G+
Sbjct: 317 AGGVKNVYVHDCVFDGTQIGIRFKTRRNRAGGVNDALYEKIRMINVGEAFKWDLLGSKRY 376
Query: 116 CGSHPDDDFDPDAL----PAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
G + + P A+ P I I K+ I + + GI E P +N+ + N
Sbjct: 377 VGELA-ERYPPRAVNKLTPTIKDIHIKNFIVESAEKILSVNGIPEIPCSNVLIEN 430
>gi|379723469|ref|YP_005315600.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
3016]
gi|386726203|ref|YP_006192529.1| glycoside hydrolase [Paenibacillus mucilaginosus K02]
gi|378572141|gb|AFC32451.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus 3016]
gi|384093328|gb|AFH64764.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
K02]
Length = 530
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 9/170 (5%)
Query: 7 IEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISN 66
+EDC +G DAI +KSG DE G A G P D+ IR + G V GSEMSGG+
Sbjct: 270 VEDCSFDVGDDAICIKSGKDEAGRALGIPCEDILIRNCRVYHGHGGFV-IGSEMSGGVRR 328
Query: 67 VQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI---NVAFGAC--GNCGSH-P 120
++VE + G+ F++T+GRGG ++ I I + +I ++F G GS
Sbjct: 329 LRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEIERIRMNSIVGEAISFHLFYEGKEGSGVA 388
Query: 121 DDDFDPDAL--PAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNIS 168
++ P ++ P IT +D+ A G+ E P + + N +
Sbjct: 389 GENIVPVSVETPIFRGITIRDVQCAGAETALLINGLPEMPLDGLVVENFT 438
>gi|86143268|ref|ZP_01061670.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830173|gb|EAQ48633.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 547
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 20/183 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +NV + + +G DAI +KSG +E G PT +V I+ + G V GSEM
Sbjct: 279 SCENVLVYNNTFDVGDDAICIKSGKNEDGRKRNMPTQNVIIKNNTVYHGHGGFVV-GSEM 337
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGA- 112
SGG+S + + + + G+ F++T+GRGG ++QI IS + I N+ +G
Sbjct: 338 SGGVSKIHISHCNFIGTDTGLRFKSTRGRGGVVEQIYISHIYMNEIKTDAIRFNLYYGGQ 397
Query: 113 ----CGNCGSHPDDDFDPDALPAIDQITFKDIIGTNIT-----IAGNFTGIQEAPFANIC 163
+ + +D P+ I+ +FKDI ++IT +G F G+ E N+
Sbjct: 398 APDLSNDLAENTEDRDVPEV--TIETPSFKDIYISDITSVKAHKSGFFMGLPEMNIQNVS 455
Query: 164 LSN 166
+ N
Sbjct: 456 IKN 458
>gi|418299606|ref|ZP_12911438.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
gi|355534759|gb|EHH04058.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
Length = 517
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGW-----DEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 55
S NV I ++G D I++K+G ++ +A T V + L++ G V
Sbjct: 284 SCRNVTISGVRFSVGDDCIAVKAGKRGPDGEDDHLAE---TRGVRVGHCLMERGHGGLV- 339
Query: 56 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACG- 114
GSEMSGG+ +V VE + + G+ +T +GRGG + I + L + A A
Sbjct: 340 IGSEMSGGVHDVAVEDCDMIGTDRGLRLKTRRGRGGAVSNIAMRRVLLDGVKTALSANAH 399
Query: 115 -NCGSHPDDDFDPDALPA--------IDQITFKDIIGTNIT-IAGNFTGIQEAPFANICL 164
+C + DD+ PA ID IT +D+ N++ AG F G+ EAP N+ +
Sbjct: 400 YHCDADGHDDWVQSRNPAPVDSGTPFIDGITVEDVEIRNLSHAAGAFLGLAEAPIRNVTI 459
Query: 165 SNISLL 170
N++++
Sbjct: 460 RNVTIV 465
>gi|383120529|ref|ZP_09941257.1| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
gi|382985024|gb|EES68500.2| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
Length = 535
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + + G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 293 SCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 351
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ VE + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 352 SGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLLFDLFYGGK 411
Query: 114 GNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G G ++D AI +T F+DI +N+ G+ F G+ E P N+
Sbjct: 412 G-AGEESEEDLLSRMKTAIPPVTEETPAFRDIHISNVICRGSGRAMFFNGLPEMPIRNVT 470
Query: 164 LSNISL 169
+ N+ +
Sbjct: 471 VKNVVM 476
>gi|29349595|ref|NP_813098.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341505|gb|AAO79292.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 538
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + + G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 296 SCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 354
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ VE + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 355 SGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLLFDLFYGGK 414
Query: 114 GNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G G ++D AI +T F+DI +N+ G+ F G+ E P N+
Sbjct: 415 G-AGEESEEDLLSRMKTAIPPVTEETPAFRDIHISNVICRGSGRAMFFNGLPEMPIRNVT 473
Query: 164 LSNISL 169
+ N+ +
Sbjct: 474 VKNVVM 479
>gi|380693930|ref|ZP_09858789.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 528
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + + G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 286 SCKNALIINSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 344
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ VE + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 345 SGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLLFDLFYGGK 404
Query: 114 GNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G G ++D AI +T F+DI +NI G+ F G+ E P N+
Sbjct: 405 G-AGEESEEDLLSRMKTAIPPVTEETPAFRDIHISNIICRGSGRAMFFNGLPEMPIRNVT 463
Query: 164 LSNISL 169
+ N+ +
Sbjct: 464 VKNVVM 469
>gi|395803621|ref|ZP_10482865.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434175|gb|EJG00125.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 553
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 90/182 (49%), Gaps = 16/182 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+ +G DAI +KSG D+ G G P ++ ++ ++ G V GSEM
Sbjct: 287 SCKNVIIENSSFDVGDDAICIKSGKDKDGRDRGVPCENIIVKNNIVYHGHGG-VTVGSEM 345
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFG-- 111
SGG+ N+ V + G+ F++T+GRGG ++ I ISD + +I ++ +G
Sbjct: 346 SGGVKNLHVSNCTFMGTDVGLRFKSTRGRGGVVENIYISDVFMTDIPSQAISFDLYYGGK 405
Query: 112 ACGNCGSHPDDDFDPDALPAIDQI-TFKDIIGTNITIAGN-----FTGIQEAPFANICLS 165
+ + + A+P ++ FK+I NITI G G+ E NI ++
Sbjct: 406 SIAETLAEGGNTVSTKAIPVNEETPQFKNISIKNITIKGAQQAVFLQGLPEMNLENIEIT 465
Query: 166 NI 167
N+
Sbjct: 466 NL 467
>gi|338211743|ref|YP_004655796.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
gi|336305562|gb|AEI48664.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
Length = 781
Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 55/189 (29%), Positives = 81/189 (42%), Gaps = 16/189 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N +E C G D I++KSG DE G G PT + I+ + + G V GSEM
Sbjct: 509 SCRNGIVEGCTFDTGDDGITIKSGRDEQGRKRGVPTENFIIKDCKVYHAHGGFV-IGSEM 567
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ N+ V S G+ F+T +GRGG ++ I ++D + I ++ + A
Sbjct: 568 SGGVRNMFVSNCTFMGSDVGLRFKTARGRGGVVEDIYVTDVNMTEIPGEAILFDMYYAAK 627
Query: 114 ------GNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLS 165
G P +P + P K+II A G+ E NI +
Sbjct: 628 DPVPQEGESNELPAIKAEPLNEGTPQFKNFYLKNIICRGAETAILVRGLPEMSIKNINVE 687
Query: 166 NISLLINPG 174
N + N G
Sbjct: 688 NAVIEANKG 696
>gi|298383858|ref|ZP_06993419.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263462|gb|EFI06325.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 538
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + + G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 296 SCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 354
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ VE + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 355 SGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLLFDLFYGGK 414
Query: 114 GNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G G ++D AI +T F+DI +N+ G+ F G+ E P N+
Sbjct: 415 G-AGEESEEDLLSRMKTAIPPVTEETPAFRDIHISNVICRGSGRAMFFNGLPEMPIRNVT 473
Query: 164 LSNISL 169
+ N+ +
Sbjct: 474 VKNVVM 479
>gi|219887583|gb|ACL54166.1| unknown [Zea mays]
Length = 463
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V IEDC I G D +++KSGWDEYGI+YG P+ + IRR+ S + + +A GSEM
Sbjct: 247 SCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEM 306
Query: 61 SGGISNVQVEKIHLYDS 77
SGG + H +++
Sbjct: 307 SGGGVRAAPDDAHHHEA 323
>gi|189464040|ref|ZP_03012825.1| hypothetical protein BACINT_00375 [Bacteroides intestinalis DSM
17393]
gi|189438613|gb|EDV07598.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 532
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ IE+C I D I LK+G D G+ RPT ++ IR + G + GSE
Sbjct: 283 SSTNILIENCEIDCNDDNICLKAGRDADGLRVNRPTENIVIRNCTVHKGGGL-ITCGSET 341
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA 112
SGGI NV + + + N ++ ++ RGG I+ I I+ E N+ FGA
Sbjct: 342 SGGIRNVLAHDLKAFGTSNVLQLKSAMTRGGVIENIYITRVEAKNVRRIFGA 393
>gi|299148526|ref|ZP_07041588.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513287|gb|EFI37174.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 539
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + + G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 297 SCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 355
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ VE + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLLFDLFYGGK 415
Query: 114 GNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G G ++D AI +T F++I +NI G+ F G+ E P +NI
Sbjct: 416 G-AGEESEEDLLSRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLPEMPISNIT 474
Query: 164 LSNISL 169
+ N+ +
Sbjct: 475 VKNVVM 480
>gi|218129299|ref|ZP_03458103.1| hypothetical protein BACEGG_00876 [Bacteroides eggerthii DSM 20697]
gi|217988476|gb|EEC54797.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 533
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 19/184 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + I G DAI +KSG D+ G G P +V ++ + G V GSEM
Sbjct: 293 SCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKNNTVLHGHGGFVV-GSEM 351
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ N+ V + G+ F++T+GRGG ++ I I + + +I ++ +G
Sbjct: 352 SGGVKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHMIDIPHEPLLFDLFYGGK 411
Query: 114 GNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G ++D +I ++T F++I +NI G+ F G+ E P N+
Sbjct: 412 A-AGEETEEDLKSRMKASIPEVTVETPSFRNIHISNIICKGSGRAMFFNGLPEMPIRNVT 470
Query: 164 LSNI 167
+ N+
Sbjct: 471 VKNV 474
>gi|300725841|ref|ZP_07059307.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299776888|gb|EFI73432.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 447
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 11/176 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I + + G DAI +KSG +E G G P +V+I+ + G V GSEM
Sbjct: 237 SCKNVVIINSLFDAGDDAICIKSGKNEAGRRRGVPCENVYIKNNTVLHGHGGFV-IGSEM 295
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ N+ + + G+ F++ +GRGG ++ I I + NI N+ + +
Sbjct: 296 SGGVKNIYISDCTFIGTDVGLRFKSARGRGGVVENIYIDRINMKNIVNEAITMNLYYSSN 355
Query: 114 GNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
G D + + P I K+++ + G+ E P NI + N+ +
Sbjct: 356 GKPAERTDVN---EGTPVFRNIEMKNLLVEGAGKSFYLYGLPEMPLENISIQNMRV 408
>gi|160887026|ref|ZP_02068029.1| hypothetical protein BACOVA_05040 [Bacteroides ovatus ATCC 8483]
gi|423288884|ref|ZP_17267735.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
gi|156107437|gb|EDO09182.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|295086775|emb|CBK68298.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|392668974|gb|EIY62466.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
Length = 539
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + + G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 297 SCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 355
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ VE + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLLFDLFYGGK 415
Query: 114 GNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G G ++D AI +T F++I +NI G+ F G+ E P +NI
Sbjct: 416 G-AGEESEEDLLSRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLPEMPISNIT 474
Query: 164 LSNISL 169
+ N+ +
Sbjct: 475 VKNVVM 480
>gi|383114440|ref|ZP_09935204.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
gi|382948584|gb|EIC71811.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
Length = 529
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + + G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 287 SCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 345
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ VE + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 346 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLLFDLFYGGK 405
Query: 114 GNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G G ++D AI +T F++I +NI G+ F G+ E P +NI
Sbjct: 406 G-AGEESEEDLLSRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLPEMPISNIT 464
Query: 164 LSNISL 169
+ N+ +
Sbjct: 465 VKNVVM 470
>gi|423294962|ref|ZP_17273089.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
gi|392674542|gb|EIY67988.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
Length = 529
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + + G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 287 SCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 345
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ VE + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 346 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLLFDLFYGGK 405
Query: 114 GNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G G ++D AI +T F++I +NI G+ F G+ E P +NI
Sbjct: 406 G-AGEESEEDLLSRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLPEMPISNIT 464
Query: 164 LSNISL 169
+ N+ +
Sbjct: 465 VKNVVM 470
>gi|423223572|ref|ZP_17210041.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638197|gb|EIY32044.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 551
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 18/213 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N+ + D +G DAI +KSG DE G G P +++ + + G V GSEM
Sbjct: 285 SCTNLLLTDSWFDVGDDAICIKSGKDEEGRRRGIPASNIIVDNCVCYHGHGGFVV-GSEM 343
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGG-----YIKQIVISD--AELYNINVAFGAC 113
SGG+ N+ V + G+ F++ +GRGG YIK I+++D +E ++ +G
Sbjct: 344 SGGVKNIAVSNCRFSGTDVGLRFKSKRGRGGVVENIYIKNIMMNDIVSEALLFDLFYGKR 403
Query: 114 GNCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICLSN 166
+ P+ D D A A D+ T FKDI + +T G F G+ E N+ + +
Sbjct: 404 VSV-KLPEQDEDMIAFDA-DETTPQFKDIYISQVTCHGAKRAMLFNGLPEMNVRNVFIED 461
Query: 167 ISLLINPGSYNSWECSNIHGSSESVFPEPCPEL 199
+ + G+ E +N++ + V P+ P L
Sbjct: 462 CHIYADEGA-KIHEATNVNLRNVMVTPKSGPAL 493
>gi|393786391|ref|ZP_10374527.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
gi|392660020|gb|EIY53637.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
Length = 509
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 79/185 (42%), Gaps = 17/185 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + +G D I LKSG DE G RP +V + + G V GSEM
Sbjct: 284 SCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCTVFKGHGGFVV-GSEM 342
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ NV V + G+ F++ +GRGG ++ I I + + +I N+ +G
Sbjct: 343 SGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNVSMMDIPTEPVTFNLYYGGK 402
Query: 114 G-----NCGSHPDDDFDP----DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICL 164
G DP D P I +++ +N A F GI E P I L
Sbjct: 403 SAVEVLESGEKIPAKVDPLPVDDTTPCFRNIHISNLVCSNARRALFFNGIPEMPIDGITL 462
Query: 165 SNISL 169
N+ +
Sbjct: 463 DNLDI 467
>gi|298385760|ref|ZP_06995318.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298261901|gb|EFI04767.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 445
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + + G V GSEM
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLAGHGG-VVIGSEM 306
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 307 SGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQM 366
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ + P + + T+ G++EAP ++I L +I +
Sbjct: 367 PAEAKSERTPIFRNVHISGMTVTDAKTPIKIVGLEEAPISDIVLRDIHI 415
>gi|293369380|ref|ZP_06615965.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336406828|ref|ZP_08587475.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
gi|292635547|gb|EFF54054.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335933190|gb|EGM95200.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
Length = 529
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + + G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 287 SCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 345
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ VE + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 346 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLLFDLFYGGK 405
Query: 114 GNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G G ++D AI +T F++I +NI G+ F G+ E P +NI
Sbjct: 406 G-AGEESEEDLLSRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLPEMPISNIT 464
Query: 164 LSNISL 169
+ N+ +
Sbjct: 465 VKNVVM 470
>gi|329956221|ref|ZP_08296901.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328524695|gb|EGF51756.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 506
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 86/186 (46%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + +G D I LKSG DE G RP +V + + G V GSEM
Sbjct: 285 SCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCTVFKGHGGFVV-GSEM 343
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ NV V + G+ F++ +GRGG ++ I I++ + +I N+ +G
Sbjct: 344 SGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSMMDIPTEPITFNLYYGGK 403
Query: 114 GNCGSHPDDDFDP---DALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
+ P + LP +D+ T F++I N+ AG F GI E P N+
Sbjct: 404 SAVEVLESGEKVPAKVEPLP-VDETTPCFRNIHVKNLICAGARRALFFNGIPEMPIENVV 462
Query: 164 LSNISL 169
L +I +
Sbjct: 463 LEDIDI 468
>gi|212693553|ref|ZP_03301681.1| hypothetical protein BACDOR_03070 [Bacteroides dorei DSM 17855]
gi|212663806|gb|EEB24380.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 539
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 15 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 74
G D I +KSG DE G G P +V + + G V GSEMSGG++N+ V+
Sbjct: 313 GDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHGGFVV-GSEMSGGVNNIYVDNCTF 371
Query: 75 YDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGACGNCGSHPDDDFDP- 126
+ G+ F++ +GRGG ++ I IS+ + NI N+ +G G G P+ D
Sbjct: 372 MGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEALIFNLYYGGKGR-GEDPNQDEKKA 430
Query: 127 -DALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICLSNI 167
+P + + T F++I ++T G F G+ E NI + NI
Sbjct: 431 ETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPEMRIKNINMENI 479
>gi|294778294|ref|ZP_06743720.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294447922|gb|EFG16496.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 539
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 15 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 74
G D I +KSG DE G G P +V + + G V GSEMSGG++N+ V+
Sbjct: 313 GDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHGGFVV-GSEMSGGVNNIYVDNCTF 371
Query: 75 YDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGACGNCGSHPDDDFDP- 126
+ G+ F++ +GRGG ++ I IS+ + NI N+ +G G G P+ D
Sbjct: 372 MGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEALIFNLYYGGKGR-GEDPNQDEKKA 430
Query: 127 -DALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICLSNI 167
+P + + T F++I ++T G F G+ E NI + NI
Sbjct: 431 ETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPEMRIKNINMENI 479
>gi|423228811|ref|ZP_17215217.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
gi|423247623|ref|ZP_17228671.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392631516|gb|EIY25487.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392635550|gb|EIY29449.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
Length = 539
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 15 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 74
G D I +KSG DE G G P +V + + G V GSEMSGG++N+ V+
Sbjct: 313 GDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHGGFVV-GSEMSGGVNNIYVDNCTF 371
Query: 75 YDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGACGNCGSHPDDDFDP- 126
+ G+ F++ +GRGG ++ I IS+ + NI N+ +G G G P+ D
Sbjct: 372 MGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEALIFNLYYGGKGR-GEDPNQDEKKA 430
Query: 127 -DALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICLSNI 167
+P + + T F++I ++T G F G+ E NI + NI
Sbjct: 431 ETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPEMRIKNINMENI 479
>gi|192362237|ref|YP_001980696.1| polygalacturonase pga28A [Cellvibrio japonicus Ueda107]
gi|190688402|gb|ACE86080.1| polygalacturonase, putative, pga28A [Cellvibrio japonicus Ueda107]
Length = 489
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S D V IEDC G D I++KSG + G RP+ ++ IR ++ G V GSEM
Sbjct: 295 SCDRVLIEDCYFDTGDDCIAIKSGRNHDGRRINRPSQNIVIRNCHMRRGHG-GVVIGSEM 353
Query: 61 SGGISNVQVEKIHLY--DSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFG-----AC 113
SGG+ NV VE + D G+ +T RGG ++ D + + A
Sbjct: 354 SGGVRNVFVEHCEMNSPDLERGLRIKTNSVRGGVVENFFARDITIVEVKNAIVIDFQYEE 413
Query: 114 GNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
G+ G H P + I F+ I G + +P +N+ L N
Sbjct: 414 GDAGEH---------TPIVRNIDFRGITCAKAERVFQVRGYERSPISNLALRN 457
>gi|150004535|ref|YP_001299279.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|319643966|ref|ZP_07998541.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345518227|ref|ZP_08797681.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|423312455|ref|ZP_17290392.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
gi|149932959|gb|ABR39657.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|254835520|gb|EET15829.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317384490|gb|EFV65457.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392688143|gb|EIY81432.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
Length = 539
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 15 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 74
G D I +KSG DE G G P +V + + G V GSEMSGG++N+ V+
Sbjct: 313 GDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHGGFVV-GSEMSGGVNNIYVDNCTF 371
Query: 75 YDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGACGNCGSHPDDDFDP- 126
+ G+ F++ +GRGG ++ I IS+ + NI N+ +G G G P+ D
Sbjct: 372 MGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEALIFNLYYGGKGR-GEDPNQDEKKA 430
Query: 127 -DALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICLSNI 167
+P + + T F++I ++T G F G+ E NI + NI
Sbjct: 431 ETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPEMRIKNINMENI 479
>gi|282601137|ref|ZP_05980861.2| glycoside hydrolase, family 77 [Subdoligranulum variabile DSM
15176]
gi|282569962|gb|EFB75497.1| polygalacturonase (pectinase) [Subdoligranulum variabile DSM 15176]
Length = 531
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 8/137 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N + + G D++++KSG + G A GRP+ ++I + SG + GSEM
Sbjct: 331 SSTNCTLFASELYTGDDSVAIKSGKNPEGNAIGRPSAHIYI--FDCRVGSGQGLCIGSEM 388
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ +VQ+ L +S +G+E + T RGGY++ + + D + + + + +
Sbjct: 389 SGGVEDVQIWDCDLENSFSGLEIKATAKRGGYVRGVTVRDCKAPRVMI------HAVPYN 442
Query: 121 DDDFDPDALPAIDQITF 137
DD D +P ++ TF
Sbjct: 443 DDGEAADTVPVLEHFTF 459
>gi|349858579|gb|AEQ20324.1| endopygalactorunase [uncultured bacterium CSLG10]
Length = 452
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 26/192 (13%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V +++ I DAI +K+G D G+ RPT +V I V ++ + + + FGSE
Sbjct: 223 SSSDVLVQNADIECNDDAIVMKAGRDADGLRVNRPTENVVIHDVTVRDGA-AGITFGSET 281
Query: 61 SGGISNVQVEKIH-LYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
SGGI +V+ +IH L S GI F++ RGG ++ I I D ++ N+ AF N +
Sbjct: 282 SGGIRHVEAYRIHVLAPSPIGILFKSAATRGGTVEDISIHDIDMRNVPTAFSV--NFNWN 339
Query: 120 PDDDFD---------PD-------------ALPAIDQITFKDIIGTNITIAGNFTGIQEA 157
P+ + PD LP + I +I + T A + +A
Sbjct: 340 PNYSYAKIPQGLQNVPDYYKVMTQEVPRAQGLPHLKNIRISNIKASGSTQAFSVGAYADA 399
Query: 158 PFANICLSNISL 169
P + NI +
Sbjct: 400 PLQGVTFRNIDI 411
>gi|323452523|gb|EGB08397.1| hypothetical protein AURANDRAFT_26417 [Aureococcus anophagefferens]
Length = 460
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 104/205 (50%), Gaps = 25/205 (12%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
+V +E+C+I+ G DA++LK+G D G G + ++ +RR +L +S + + GSE+SGG
Sbjct: 248 DVLVENCVISAGDDAVALKTGRDADGWRVGVASENIVVRRNVL-ASRFNGICVGSEVSGG 306
Query: 64 ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPDDD 123
+ NV + + + + I ++ RG +++ + ++ + Y++ G+C H +D
Sbjct: 307 VDNVFFLENRIERAFHAIFVKSNSERGSFVRYVHVAHVKAYDL------AGDC-IHFTND 359
Query: 124 FD--PDALP-AIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI----SLLINP--- 173
+ A P ++ FKD+I + A T + +P A++ + ++ ++ P
Sbjct: 360 YKGVRGARPTTFEKFAFKDVICRSAVFAIRATSLAASPIADVTIRDVIVKSTMRTTPDHP 419
Query: 174 -------GSYNSWECSNIHGSSESV 191
+ +WE +N+ + ++V
Sbjct: 420 VSHPVAVANVANWEVANLRVNGQAV 444
>gi|237708712|ref|ZP_04539193.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265756017|ref|ZP_06090484.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513499|ref|ZP_08793020.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423242356|ref|ZP_17223465.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
gi|229437348|gb|EEO47425.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229457138|gb|EEO62859.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234095|gb|EEZ19696.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392639642|gb|EIY33458.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
Length = 539
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 15 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 74
G D I +KSG DE G G P +V + + G V GSEMSGG++N+ V+
Sbjct: 313 GDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHGGFVV-GSEMSGGVNNIYVDNCTF 371
Query: 75 YDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGACGNCGSHPDDDFDP- 126
+ G+ F++ +GRGG ++ I IS+ + NI N+ +G G G P+ D
Sbjct: 372 MGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEALIFNLYYGGKGR-GEDPNQDEKKA 430
Query: 127 -DALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICLSNI 167
+P + + T F++I ++T G F G+ E NI + NI
Sbjct: 431 ETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPEMRIKNINMENI 479
>gi|423311776|ref|ZP_17289713.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
gi|392689891|gb|EIY83166.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
Length = 446
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 251 SCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGG-VVIGSEM 309
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 310 SGGVKKVTISNCIFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMRNIKKEAIVLNLKYSKM 369
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ D P I + ++ G+ EAP I + ++ +
Sbjct: 370 PAEPKSDRTPEFRNIYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYI 418
>gi|294777094|ref|ZP_06742551.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|319643453|ref|ZP_07998076.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345517811|ref|ZP_08797274.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836521|gb|EET16830.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|294448963|gb|EFG17506.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|317384858|gb|EFV65814.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 446
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 251 SCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGG-VVIGSEM 309
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 310 SGGVKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKM 369
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ D P I + ++ G+ EAP I + ++ +
Sbjct: 370 PAEPKSDRTPEFRNIYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYI 418
>gi|237710945|ref|ZP_04541426.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229454789|gb|EEO60510.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 446
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 251 SCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGG-VVIGSEM 309
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 310 SGGVKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKM 369
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ D P I + ++ G+ EAP I + ++ +
Sbjct: 370 PAEPKSDRTPEFRNIYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYI 418
>gi|212694786|ref|ZP_03302914.1| hypothetical protein BACDOR_04320 [Bacteroides dorei DSM 17855]
gi|265750531|ref|ZP_06086594.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|212662640|gb|EEB23214.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|263237427|gb|EEZ22877.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 446
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 251 SCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGG-VVIGSEM 309
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 310 SGGVKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKM 369
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ D P I + ++ G+ EAP I + ++ +
Sbjct: 370 PAEPKSDRTPEFRNIYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYI 418
>gi|345516133|ref|ZP_08795626.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423227918|ref|ZP_17214324.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|423239050|ref|ZP_17220166.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
gi|423243178|ref|ZP_17224254.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|229434099|gb|EEO44176.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392637665|gb|EIY31531.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|392646053|gb|EIY39772.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|392647461|gb|EIY41162.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
Length = 446
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 251 SCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGG-VVIGSEM 309
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 310 SGGVKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKM 369
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ D P I + ++ G+ EAP I + ++ +
Sbjct: 370 PAEPKSDRTPEFRNIYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYI 418
>gi|150005260|ref|YP_001300004.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149933684|gb|ABR40382.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 446
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G P ++ I + S G V GSEM
Sbjct: 251 SCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGG-VVIGSEM 309
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ V + + GI ++T+GRGG ++ I +S+ + NI S
Sbjct: 310 SGGVKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKM 369
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ D P I + ++ G+ EAP I + ++ +
Sbjct: 370 PAEPKSDRTPEFRNIYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYI 418
>gi|222530340|ref|YP_002574222.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
gi|222457187|gb|ACM61449.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
Length = 447
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S V I +C I +G D ++LKSG ++ P ++ I ++ G V GSEM
Sbjct: 187 SCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCIMAHGHGG-VVIGSEM 243
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFG-----ACGN 115
SGG+ NV + + GI +T +GRGG ++ I +S+ + N+ F CG
Sbjct: 244 SGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPFAFYMYYHCGK 303
Query: 116 CGSHPDD-DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
G D P D P + +I D++ A F G+ E P ++ SN+++
Sbjct: 304 GGKEKRVWDKSPYPVDDTTPVVRRIYISDVVVRQARAAAGFLYGLTEMPIEDVVFSNVTV 363
>gi|284039631|ref|YP_003389561.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283818924|gb|ADB40762.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 551
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 79/185 (42%), Gaps = 15/185 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N IE C + +G DAI +KSG DE G G PT + IR + + G V GSEM
Sbjct: 282 SCKNFLIEGCTLDVGDDAICIKSGKDEEGRKRGMPTENGIIRNNTVYNGHGGFVV-GSEM 340
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN-----------VA 109
SGG + V + G+ F++ +GRGG ++ I D + NI V
Sbjct: 341 SGGARYLFVSNCTFMGTDKGLRFKSVRGRGGVVEHIYAKDIFMKNIAQEAIFFDMYYFVK 400
Query: 110 FGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
F G P + + P + F++I+ T G+ E I ++N+ L
Sbjct: 401 FATDGERDERPVVN---EGTPVFRNMRFENIVCTGAKKGIFVRGLPEMAIQTIAMANMVL 457
Query: 170 LINPG 174
G
Sbjct: 458 ETEKG 462
>gi|340751772|ref|ZP_08688582.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
gi|229420732|gb|EEO35779.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
Length = 512
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 14/170 (8%)
Query: 13 AMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKI 72
++G D I++KSG G +P+ + I+ ++ G V GSEMSGG+ N+ +EK
Sbjct: 289 SVGDDCIAIKSGKLYLGKVLNKPSKNFIIKNCSMKYGHGG-VVIGSEMSGGVENINIEKC 347
Query: 73 HLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGACGNCGSHPDDDFD----- 125
Y + GI +T +GRG G I I + + + + V F PD +
Sbjct: 348 DFYKTDKGIRIKTRRGRGENGVIDGIYVKNISMKEVKVPFVFNSFYFCDPDGKTEYVYTK 407
Query: 126 -----PDALPAIDQITFKDIIGTNITI-AGNFTGIQEAPFANICLSNISL 169
+ P+I I+F++I + + AG G+ E P N+ N+ +
Sbjct: 408 EKLPVDERTPSIKNISFENIKAEDTLVCAGFLYGLPEKPIENVKFKNVEV 457
>gi|337750378|ref|YP_004644540.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
KNP414]
gi|336301567|gb|AEI44670.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus KNP414]
Length = 530
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 7 IEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISN 66
+EDC +G DAI +KSG DE G G P D+ IR + G V GSEMSGG+
Sbjct: 270 VEDCSFDVGDDAICIKSGKDEAGRELGIPCEDILIRNCRVYHGHGGFV-IGSEMSGGVRR 328
Query: 67 VQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI---NVAFGAC--GNCGSH-P 120
++VE + G+ F++T+GRGG ++ I I + +I ++F G GS
Sbjct: 329 LRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEIERIRMNSIVGEAISFHLFYEGKEGSGVA 388
Query: 121 DDDFDPDAL--PAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNIS 168
++ P ++ P IT +D+ A G+ E P + + N +
Sbjct: 389 GENIVPVSVETPIFRGITIRDVQCAGAETALLINGLPEMPLDGLVVENFT 438
>gi|408789181|ref|ZP_11200887.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
gi|408485004|gb|EKJ93352.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
Length = 519
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 24/188 (12%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGW-----DEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 55
S NV I ++G D I++K+G ++ +A T + +R L++ G V
Sbjct: 286 SCRNVTISGVRFSVGDDCIAVKAGKRSPDGEDDHLAE---TRGIRVRHCLMERGHGGLV- 341
Query: 56 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGN 115
GSEMSGG+ +V VE + + G+ +T +GRGG + I + L + A A N
Sbjct: 342 IGSEMSGGVHDVSVEDCDMVGTDRGLRLKTRRGRGGIVSNIAMRRVLLDGVQTALSA--N 399
Query: 116 CGSHPDDDFDPDAL------------PAIDQITFKDIIGTNIT-IAGNFTGIQEAPFANI 162
H D D + + P ID I +D+ N+ AG F G+ EAP N+
Sbjct: 400 AHYHCDADGHDERVQSRQPAPIDKGTPFIDGIIVEDVEIRNLAHAAGVFLGLPEAPIRNV 459
Query: 163 CLSNISLL 170
+ N++++
Sbjct: 460 AIRNLTIV 467
>gi|344995379|ref|YP_004797722.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963598|gb|AEM72745.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 447
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S V I +C I +G D ++LKSG ++ P ++ I ++ G V GSEM
Sbjct: 187 SCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMAHGHGG-VVIGSEM 243
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFG-----ACGN 115
SGG+ NV + + GI +T +GRGG ++ I +S+ + N+ F CG
Sbjct: 244 SGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPFAFYMYYHCGK 303
Query: 116 CGSHPDD-DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
G D P D P + +I D++ A F G+ E P ++ SN+++
Sbjct: 304 GGKEKRVWDKSPYPVDDTTPIVRRIYISDVVVREARAAAGFLYGLTEMPIEDVVFSNVTV 363
>gi|344995681|ref|YP_004798024.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963900|gb|AEM73047.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 443
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S V I +C I +G D ++LKSG ++ P ++ I ++ G V GSEM
Sbjct: 183 SCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMAHGHGG-VVIGSEM 239
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFG-----ACGN 115
SGG+ NV + + GI +T +GRGG ++ I +S+ + N+ F CG
Sbjct: 240 SGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPFAFYMYYHCGK 299
Query: 116 CGSHPDD-DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
G D P D P + +I D++ A F G+ E P ++ SN+++
Sbjct: 300 GGKEKRVWDKSPYPVDDTTPIVRRIYISDVVVREARAAAGFLYGLTEMPIEDVVFSNVTV 359
>gi|424911961|ref|ZP_18335338.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392847992|gb|EJB00515.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 517
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 24/188 (12%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGW-----DEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 55
S NV I ++G D I++K+G ++ +A T + +R L++ G V
Sbjct: 284 SCRNVTISGVRFSVGDDCIAVKAGKRGPDGEDDHLAE---TRGIRVRHCLMERGHGGLV- 339
Query: 56 FGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGN 115
GSEMSGG+ +V VE + + G+ +T +GRGG + I + L + A A N
Sbjct: 340 IGSEMSGGVHDVSVEDCDMVGTDRGLRLKTRRGRGGIVSNIAMRRVLLDGVQTALSA--N 397
Query: 116 CGSHPDDDFDPDAL------------PAIDQITFKDIIGTNIT-IAGNFTGIQEAPFANI 162
H D D + + P ID I +D+ N+ AG F G+ EAP N+
Sbjct: 398 AHYHCDADGHDERVQSRQPAPIDKGTPFIDGIIVEDVEIRNLAHAAGVFLGLPEAPIRNV 457
Query: 163 CLSNISLL 170
+ N++++
Sbjct: 458 AIRNLTIV 465
>gi|423216971|ref|ZP_17203467.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
gi|392629501|gb|EIY23508.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
Length = 539
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + + G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 297 SCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 355
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ VE + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLLFDLFYGGK 415
Query: 114 GNCGSHPDDDF---DPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G G ++D A+P + + T F++I +NI G+ F G+ E P +N+
Sbjct: 416 G-AGEESEEDLLNRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLPEMPISNVT 474
Query: 164 LSNISL 169
+ N+ +
Sbjct: 475 VKNVVM 480
>gi|225165583|ref|ZP_03727398.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
gi|224800169|gb|EEG18584.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
Length = 421
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 85/175 (48%), Gaps = 12/175 (6%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
NV IEDC++ G D I LKSG D+ G A RPT +V +RR+ + G + GSE+S G
Sbjct: 228 NVLIEDCLVDTGDDCICLKSGRDQDGWAENRPTENVIVRRIRTRRGHG-GIVLGSELSSG 286
Query: 64 ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQI---------VISDAELYNINVAFGACG 114
I NV VE + GI ++ GRGG+++ I +I +A + +++ A G
Sbjct: 287 IRNVLVEDCDFSGTERGIRIKSAPGRGGFVENIHMRNIRMSDIIDEAIIIHMDYGSVAKG 346
Query: 115 NCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
GS + + I +D+ + A + TG P +I L N+ L
Sbjct: 347 QVGSAFQSNTPSPT--RMRNILIEDVTCASAGKALDITGDAALPPESITLRNLRL 399
>gi|373954236|ref|ZP_09614196.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373890836|gb|EHQ26733.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 545
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 98/218 (44%), Gaps = 19/218 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV +E+ G D + +KSG DE G G PT +V +R ++ + G V GSEM
Sbjct: 281 SCRNVLVENSTFDAGDDGLCIKSGRDEEGRKRGVPTENVVMRNNIVYRAHGGFV-IGSEM 339
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI---NVAFGA--CGN 115
SGG N+ V + G+ F+T +GRGG ++ I I + + +I + F
Sbjct: 340 SGGARNIFVSDCTFIGTDIGLRFKTARGRGGIVENIYIKNISMRDILHEAILFDMYYMSK 399
Query: 116 CGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGI-----QEAPFANICLSNISLL 170
GS P A Q F++ +N+ G TGI E NI L N+ L
Sbjct: 400 AGSTLGLKTFPPVTEATPQ--FRNFYVSNVACNGAETGIFVRGLPEMSIKNIYLENMVLK 457
Query: 171 INPGS----YNSWECSNIHGSSESVFPEPCPELENSSS 204
+ G+ N+ NI + ES +P +ENS+
Sbjct: 458 ADKGAELIEANNISLKNI--TLESKNTKPLINIENSTQ 493
>gi|153807509|ref|ZP_01960177.1| hypothetical protein BACCAC_01789 [Bacteroides caccae ATCC 43185]
gi|149129871|gb|EDM21083.1| polygalacturonase (pectinase) [Bacteroides caccae ATCC 43185]
Length = 539
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + + G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 297 SCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 355
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ VE + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLLFDLFYGGK 415
Query: 114 GNCGSHPDDDF---DPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G G ++D A+P + + T F++I +NI G+ F G+ E P +N+
Sbjct: 416 G-AGEESEEDLLNRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLPEMPISNVT 474
Query: 164 LSNISL 169
+ N+ +
Sbjct: 475 VKNVVM 480
>gi|255036065|ref|YP_003086686.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254948821|gb|ACT93521.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 455
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 7/173 (4%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S NV I DC+ G DAI++KSG + G P+ ++ IR + +++ VA GSE+S
Sbjct: 265 SQNVFITDCVFDQGDDAIAIKSGRNPEGWRLKTPSKNIVIRNLTVKNGH-QLVAIGSELS 323
Query: 62 GGISNVQVEKIHLYD--SLNGIEF-RTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS 118
GGI NV + + + D LN + F +T + GGY+K I S+ I++
Sbjct: 324 GGIENVDISQCQVVDGAKLNHLLFIKTNERMGGYVKNIYASNLTAGKIDLGVLGIETDVL 383
Query: 119 HPDDDFDP---DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNIS 168
+ P L I I +I ++ G +E P N+ + NI+
Sbjct: 384 YQWRTLVPTKIRKLTPISDIYLSNISVKDVKFESRILGQKELPVKNVSMKNIT 436
>gi|374376429|ref|ZP_09634087.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233269|gb|EHP53064.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 517
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I++G D I++KSG D G + RP + I + G V GSEM
Sbjct: 238 SCSNVHISDCHISVGDDCITIKSGKDIPGRSKNRPAENYTITNCTMLRGHGG-VVIGSEM 296
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN----VAFGACGNC 116
SGG+ + + + GI +T +GRGG ++ I +S+ + NI V
Sbjct: 297 SGGVKKIAISNCIFDGTDRGIRIKTARGRGGVVEDIRVSNIVMKNIAEQAIVLDMEYAKG 356
Query: 117 GSHPDDDFDPDALPAIDQITFKDIIGTNITIAGN----FTGIQEAPFANICLSNI 167
P + P TF++I +NIT N GI+E P + I L+++
Sbjct: 357 AEEPVSERTP---------TFRNIRLSNITAYTNQALLINGIREMPVSGISLNDV 402
>gi|336415491|ref|ZP_08595830.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
gi|335940370|gb|EGN02237.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
Length = 524
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 79/176 (44%), Gaps = 14/176 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C G DAI LKSG DE G G P ++ +R + G V GSEM
Sbjct: 295 SCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRNNTVLHGHGGFV-IGSEM 353
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK---------QIVISDAELYNINVAFG 111
SGG+ NV V + + G+ F++ +GRGG ++ + +DA + ++ +
Sbjct: 354 SGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADL---YY 410
Query: 112 ACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 167
A + S P + PA I D+ A G+ E P NI + N+
Sbjct: 411 AAKSAPSEPVPSVSEET-PAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNM 465
>gi|189468045|ref|ZP_03016830.1| hypothetical protein BACINT_04439 [Bacteroides intestinalis DSM
17393]
gi|189436309|gb|EDV05294.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 534
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 86/183 (46%), Gaps = 17/183 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + I G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 295 SCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 353
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVI---------SDAELYNINVAFG 111
SGG+ NV V + G+ F++T+GRGG ++ I I +A L+++
Sbjct: 354 SGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINMIDIPHEALLFDLFYGGK 413
Query: 112 ACGNCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICL 164
G + ++PA+ + T F+DI TN+T G F G+ E P N+ +
Sbjct: 414 GAGEESEEELEGRMKSSIPAVTEETPAFRDIHITNVTCKGTGRAMFFNGLPEMPIRNVYV 473
Query: 165 SNI 167
+I
Sbjct: 474 KDI 476
>gi|409199011|ref|ZP_11227674.1| endopolygalacturonase [Marinilabilia salmonicolor JCM 21150]
Length = 568
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 89/188 (47%), Gaps = 22/188 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I + +G DAI KSG +E G G PT +V ++ ++ G V GSEM
Sbjct: 294 SCKNVVIYNNTFDVGDDAICFKSGKNEDGRRRGIPTENVIVKNNIVYHGHGGFVV-GSEM 352
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SG + NV V + G+ F++T+GRGG ++ I IS+ ++ +I N+ +G
Sbjct: 353 SGDVRNVHVSDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDMIDIPTEPIRFNLFYG-- 410
Query: 114 GNCGSHPD-DDFDPDALPA------IDQITFKDIIGTNITI-----AGNFTGIQEAPFAN 161
GN D D+ P PA + +F++I NI A F G+ E N
Sbjct: 411 GNAPVMDDGDNSAPSEEPAEAVSVTEETPSFRNIFMKNIRANGFGNAAFFMGLPEMNLQN 470
Query: 162 ICLSNISL 169
+ L N L
Sbjct: 471 VHLENAVL 478
>gi|299148436|ref|ZP_07041498.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513197|gb|EFI37084.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 518
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 79/176 (44%), Gaps = 14/176 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C G DAI LKSG DE G G P ++ +R + G V GSEM
Sbjct: 289 SCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRNNTVLHGHGGFV-IGSEM 347
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK---------QIVISDAELYNINVAFG 111
SGG+ NV V + + G+ F++ +GRGG ++ + +DA + ++ +
Sbjct: 348 SGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADL---YY 404
Query: 112 ACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 167
A + S P + PA I D+ A G+ E P NI + N+
Sbjct: 405 AAKSAPSEPVPSVSEET-PAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNM 459
>gi|411100599|gb|AFW03783.1| Putative polygalacturonase [Enterobacteriaceae bacterium HS]
Length = 456
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS+++ IE C+ +G DA++LKSG G+ PT V + + +S G +A GSE
Sbjct: 238 SSEDIVIEHCLFDVGDDAVTLKSGSGADGLRINLPTRGVTVSHCKILASHGG-IAIGSET 296
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYN-----INVAFGACGN 115
+GGI +V V + I ++ +GRGG IK I +S+ + + + A G
Sbjct: 297 AGGIEDVTVNDCVFEGTQRAIRLKSRRGRGGTIKNITLSNLTMTGCWCPIVIGQYFAPGV 356
Query: 116 CGSHPDDDFDPDALPA------IDQITFKDIIGTNITIAGNF-TGIQEAPFANICLSN 166
+ D A P I+ + + T+I F G+ EAP + + N
Sbjct: 357 LPAERDTTLSETAQPVTPMTPRIENVRIAHVQATDIRATAAFIVGLPEAPIQRVTIEN 414
>gi|345301605|ref|YP_004821553.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
gi|345095542|gb|AEN67177.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 447
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ + ++ G D I++KSG G A P+++++I + + G SV GSE
Sbjct: 233 SSKNISLRHLKLSTGDDDIAIKSGLASTGKA--PPSSNINIDDIDIYRGHGLSV--GSET 288
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV------AFGACG 114
+ GI V ++ + + NG+ ++ + RG I I + + ++NV ++G G
Sbjct: 289 ANGIGRVTMQNVRFNGTDNGLRIKSGRDRGNQIGPISADNITMNHVNVPLVITDSYGGNG 348
Query: 115 NCGSHPDDDFDPDAL----PAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLL 170
S A+ P I +T + + TN +AG +G+ EAP NI L +I +
Sbjct: 349 GYSSKSLTSIPTSAISSLTPFIHDVTIQHLTATNSGMAGIISGLPEAPLQNITLKDIHID 408
Query: 171 INPG---SYNSWECSNIHGSSE 189
G Y S E N+H +S+
Sbjct: 409 ATHGLQSRYVSGEIKNVHVTSK 430
>gi|423212244|ref|ZP_17198773.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
gi|392695132|gb|EIY88357.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
Length = 539
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + + G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 297 SCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 355
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ VE + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLLFDLFYGGK 415
Query: 114 GNCGSHPDDDF---DPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G G ++D ++P + + T F++I +NI G+ F G+ E P +NI
Sbjct: 416 G-AGEESEEDLLNRMKTSIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLPEMPISNIT 474
Query: 164 LSNISL 169
+ N+ +
Sbjct: 475 VKNVVM 480
>gi|298482165|ref|ZP_07000353.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271722|gb|EFI13295.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 539
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + + G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 297 SCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 355
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ VE + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLLFDLFYGGK 415
Query: 114 GNCGSHPDDDF---DPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G G ++D ++P + + T F++I +NI G+ F G+ E P +NI
Sbjct: 416 G-AGEESEEDLLNRMKTSIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLPEMPISNIT 474
Query: 164 LSNISL 169
+ N+ +
Sbjct: 475 VKNVVM 480
>gi|189459631|ref|ZP_03008416.1| hypothetical protein BACCOP_00257 [Bacteroides coprocola DSM 17136]
gi|189433713|gb|EDV02698.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 535
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 15/183 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S + I++ G D I +KSG DE G G P +V IR ++ G V GSEM
Sbjct: 296 SCNRALIQNSSFDAGDDGICIKSGKDEDGRRRGEPCQNVIIRNNVVLHGHGGFVV-GSEM 354
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ V+ + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 355 SGGVKNIYVDNCTFLGTDVGLRFKSTRGRGGVVENIHINNINMINIPNEGLIFDLFYGGK 414
Query: 114 ----GNCGSHPDDDFDP---DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
G+ ++P + P + PA I K++ N+ A F G+ E P NI + N
Sbjct: 415 APGEGDGYNNPTEQKIPAVTEETPAFRDIFIKNVTAKNVGRAILFNGLPEMPIKNIHIEN 474
Query: 167 ISL 169
+++
Sbjct: 475 VTM 477
>gi|284036172|ref|YP_003386102.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283815465|gb|ADB37303.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 544
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N ++DC +G D I +KSG DE G G PT ++ +R + + G V GSEM
Sbjct: 271 SCRNGLVDDCTFDVGDDGICIKSGRDEQGRKRGVPTENITVRNSRVYHAHGGFV-IGSEM 329
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI 106
SGG+ N+ V + G+ F+T +GRGG ++ I + ++ +I
Sbjct: 330 SGGVKNLYVSNCTFMGTDVGLRFKTARGRGGVVENIFVDGIDMTDI 375
>gi|59044763|gb|AAW84064.1| pectate lyase [uncultured bacterium]
Length = 466
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 14/178 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV I +C I +G D I++K+G ++ Y P ++ I L++ G V GSE
Sbjct: 192 SSRNVYITNCYIDVGDDCIAIKAGREDS--LYRTPCENIVIANCLMRHGHGG-VVIGSET 248
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQI----VISDAEL--YNINVAFGACG 114
SGGI V + D+ GI ++ +GRGG+++ + +I + L + +N+ + G
Sbjct: 249 SGGIRKVVITNCIFEDTDRGIRLKSRRGRGGFVEDLRATNIIMEKVLCPFVLNMYYDTGG 308
Query: 115 NCGSHPDDDFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNI 167
D +P +A P+ +++F I + A F G+ E P ++ +I
Sbjct: 309 GVIDERAHDLEPHPVSEATPSFRRLSFSHITAREVQAAAAFLYGLPEQPLEDVLFDDI 366
>gi|237721299|ref|ZP_04551780.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229449095|gb|EEO54886.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 539
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + + G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 297 SCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 355
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ VE + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLLFDLFYGGK 415
Query: 114 GNCGSHPDDDF---DPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G G ++D ++P + + T F++I +NI G+ F G+ E P +NI
Sbjct: 416 G-AGEESEEDLLNRMKTSIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLPEMPISNIT 474
Query: 164 LSNISL 169
+ N+ +
Sbjct: 475 VKNVVM 480
>gi|336414787|ref|ZP_08595131.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
gi|335942157|gb|EGN04005.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
Length = 529
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + + G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 287 SCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 345
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ VE + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 346 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLLFDLFYGGK 405
Query: 114 GNCGSHPDDDF---DPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G G ++D ++P + + T F++I +NI G+ F G+ E P +NI
Sbjct: 406 G-AGEESEEDLLNRMKTSIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLPEMPISNIT 464
Query: 164 LSNISL 169
+ N+ +
Sbjct: 465 VKNVVM 470
>gi|326800288|ref|YP_004318107.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326551052|gb|ADZ79437.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 543
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV +E +G DAI +KSG +E G G PT ++ +R + + G V GSEM
Sbjct: 273 SCKNVLVEQSTFDVGDDAICIKSGRNEAGRERGMPTENLWVRNCTVYHAHGGFVV-GSEM 331
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGA- 112
SGG N+ V+ + G+ F+TT+GRGG ++ + I++ + +I ++ + A
Sbjct: 332 SGGAKNLYVDNCTFIGTDIGLRFKTTRGRGGVVENVYINNIFMKDIPGEAILFDMYYEAK 391
Query: 113 -----CGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLS 165
G P +F P +A P +++ A G+ E NI L+
Sbjct: 392 DPIVLSGEHREPPKVEFLPVTEATPQFKDFYINNVVCDGAAKALFIRGLPEMHIKNIQLT 451
Query: 166 NISLLINPGSYNSWECSNI 184
+ ++ G + E SNI
Sbjct: 452 RLDMVAKEG-IDIQEASNI 469
>gi|198277233|ref|ZP_03209764.1| hypothetical protein BACPLE_03445 [Bacteroides plebeius DSM 17135]
gi|198269731|gb|EDY94001.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 478
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 17/185 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N + + + G DAI +KSG DE G G P +V ++ ++ G V GSEM
Sbjct: 249 SCTNALVINNVFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNVVLHGHGGFVV-GSEM 307
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVI---------SDAELYNINVAFG 111
SGG+ N+ V + G+ F++T+GRGG ++ I I +A L+++
Sbjct: 308 SGGVKNIYVSDCTFLGTDVGLRFKSTRGRGGVVENIHIHNINMIDIPHEALLFDLFYGGK 367
Query: 112 ACGNCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICL 164
A G + +P + + T F+DI +N+T G F G+ E P N+ +
Sbjct: 368 AAGEETAEELAGRMKAEVPPVTEETPAFRDIYISNVTARGVGRAMFFNGLPEMPIRNVHI 427
Query: 165 SNISL 169
++++
Sbjct: 428 KDVTV 432
>gi|146295422|ref|YP_001179193.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408998|gb|ABP66002.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 447
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S + V I +C I +G D ++LKSG ++ + P ++ I ++ G + GSEM
Sbjct: 187 SCEGVRISNCYIDVGDDCVTLKSGTEDCKVRI--PCENIAITNCIMAHGHGG-IVIGSEM 243
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFG-----ACGN 115
SGG+ NV + + GI +T +GRGG ++ I +S+ + N+ F CG
Sbjct: 244 SGGVRNVVISNCIFEGTDRGIRIKTRRGRGGIVEDIRVSNIVMKNVICPFAFYMYYHCGK 303
Query: 116 CGSHPDD-DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
G D P P + +I D+I A F G+ E P ++ SN+++
Sbjct: 304 GGKEKRVWDKSPYPVDSTTPIVRRIYISDVIVRQARAAAGFLYGLTEMPIEDVVFSNVTV 363
>gi|269119326|ref|YP_003307503.1| glycoside hydrolase family protein [Sebaldella termitidis ATCC
33386]
gi|268613204|gb|ACZ07572.1| glycoside hydrolase family 28 [Sebaldella termitidis ATCC 33386]
Length = 509
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 14/181 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I ++G D I++KSG + G G P+ +++I ++ G V GSEM
Sbjct: 277 SCKNVSIIGVKFSVGDDCIAIKSGKGKIGREIGIPSENINIENCHMEFGHGG-VVIGSEM 335
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQI----VISDAEL--YNINVAFGACG 114
SGGI NV ++ ++ G+ +T +GRGG I I ++ D L + IN F C
Sbjct: 336 SGGIKNVNIKNCLFENTDRGLRIKTRRGRGGIIDGIHAENIVMDKVLTPFVIN-EFYYCD 394
Query: 115 NCGS-----HPDDDFDPDALPAIDQITFKDIIGTNITI-AGNFTGIQEAPFANICLSNIS 168
+ G + D + P I ITFK+++ N + AG G+ E + L N++
Sbjct: 395 SDGKTEYVWNKDKLEITEETPVIKNITFKNMVCKNSEVCAGFMYGLPERKIERVVLENLT 454
Query: 169 L 169
+
Sbjct: 455 I 455
>gi|312126393|ref|YP_003991267.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311776412|gb|ADQ05898.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 447
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S V I +C I +G D ++LKSG ++ P ++ I ++ G V GSEM
Sbjct: 187 SCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMAHGHGG-VVIGSEM 243
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFG-----ACGN 115
SGG+ NV + + GI +T +GRGG ++ I +S+ + N+ F CG
Sbjct: 244 SGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPFAFYMYYHCGK 303
Query: 116 CGSHPDD-DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
G D P ++ P + +I D++ A F G+ E P ++ SN+++
Sbjct: 304 GGKEKRVWDKSPYPVDESTPIVRRIYISDVVVREARAAAGFLYGLTEMPIEDVVFSNVTV 363
>gi|336431286|ref|ZP_08611139.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336019012|gb|EGN48745.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 519
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S D+V I C+ ++G D I++K+G G Y P++++ IR+ ++ G S+ GSEM
Sbjct: 278 SCDDVEITGCLFSVGDDCIAVKAGKISVGAKYKVPSSNIRIRQCCMRDGHG-SITLGSEM 336
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGACGNCGS 118
+ GI N+Q + ++ G+ +T +GRG I I+ D + ++ F
Sbjct: 337 AAGIKNLQARQCVFLNTDRGLRIKTRRGRGKDAVIDGILFEDIRMDSVLTPFVINSFYFC 396
Query: 119 HPDDD------FDPDAL----PAIDQITFKDIIGTNITIAGN-FTGIQEAPFANICLSNI 167
PD +P A+ P I ++ F++I N +A F G+ E + + +I
Sbjct: 397 DPDGHSEYVQCKEPLAVDERTPQIKELCFRNIQAKNCHVAAAFFYGLPEQKIERVEMKHI 456
Query: 168 SL 169
+
Sbjct: 457 QV 458
>gi|399031152|ref|ZP_10731291.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070621|gb|EJL61913.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 562
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 18/183 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV +E+ +G DAI +KSG D+ G G P ++ ++ ++ G V GSEM
Sbjct: 291 SCKNVIVENSSFDVGDDAICIKSGKDKDGRDRGIPCENIIVKNNIVYHGHGG-VTVGSEM 349
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFG-- 111
SGG+ N+ V + G+ F++ +GRGG ++ I ISD + +I ++ +G
Sbjct: 350 SGGVKNLHVSNCSFMGTDVGLRFKSNRGRGGVVENIFISDIYMTDIPSQAISFDLYYGGK 409
Query: 112 ACGNCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICL 164
+ + + +P +D+ T FK+I N+TIAG G+ E NI +
Sbjct: 410 SIAETLAEGGNTVSSKKVP-VDEKTPQFKNISIKNVTIAGAQQAVFLQGLPEMNLENIEI 468
Query: 165 SNI 167
+N+
Sbjct: 469 TNL 471
>gi|399029277|ref|ZP_10730250.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398072887|gb|EJL64081.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 563
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 14/174 (8%)
Query: 7 IEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISN 66
+ +C +G DAI +KSG D+ G G+PT I+ ++ G V GSEMSGG+ N
Sbjct: 299 VTNCRFDVGDDAICIKSGKDQEGRERGKPTELFVIKDCVVYHGHGGFV-IGSEMSGGVRN 357
Query: 67 VQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI---NVAFGACGNCGSHPDDD 123
+ ++ + + G+ F++T+GRGG ++ I + D + +I + F S +D
Sbjct: 358 LFIKNLTFIGTDCGLRFKSTRGRGGLVENIWMEDIRMSDIPTEAIRFEMYYFNKSGVEDP 417
Query: 124 FDPDAL----------PAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 167
+ + P + FK+I A GI E P NI N+
Sbjct: 418 LTGEMIVEKVPVSETTPVFKNMYFKNIYVDGAKQALKIMGIPEMPVENIQFKNM 471
>gi|325679916|ref|ZP_08159485.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
gi|324108354|gb|EGC02601.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
Length = 513
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 3 DNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSG 62
D V I C ++G D I++KSG E G + +P IR ++Q G+ + GSEM+G
Sbjct: 275 DTVNIVGCRFSVGDDCIAIKSGKIEIGRKFKQPANRHTIRNCIMQFGHGA-ITLGSEMAG 333
Query: 63 GISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN-------VAFGACGN 115
G+ N+ V + ++ G+ +T +GRG K VI E NI + N
Sbjct: 334 GVKNLSVSRCIFKETDRGLRIKTRRGRG---KDAVIDGIEFKNIKMDGVLTPIVMNMWYN 390
Query: 116 CGSHPD--DDFDP--------DALPAIDQITFKDIIGTNITIAGNF-TGIQEAPFANICL 164
C PD +++ D P + + TF+D+ N +A + G+ E P I +
Sbjct: 391 C-CDPDRYSEYNTTREKLPVDDRTPYLGKFTFRDMECLNCHVAACYCDGLPEMPIDEITV 449
Query: 165 SNISL 169
NI
Sbjct: 450 DNIKF 454
>gi|332299163|ref|YP_004441085.1| Polygalacturonase [Treponema brennaborense DSM 12168]
gi|332182266|gb|AEE17954.1| Polygalacturonase [Treponema brennaborense DSM 12168]
Length = 449
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 12/177 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC +++G D I+LKSG E GI RPT +V +R ++ + G V GSE
Sbjct: 219 SCTNVQIVDCEVSVGDDGIALKSGSGEDGIRVNRPTRNVTVRGCTVRDAHGGMV-IGSET 277
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYN--INVAFGACGNCG- 117
+ GI +V E + G+ ++ +GRGG I + + + + + +A CG
Sbjct: 278 AAGIRHVLAENCRFPGTDRGVRIKSRRGRGGEIYDVKLRNLVMEDNLCPIAINMYYKCGE 337
Query: 118 SHPDDD-FDPDALPAID---QITFKDIIGTNIT----IAGNFTGIQEAPFANICLSN 166
+ P F DA P D + +I G + AG G+ E+P N+ + +
Sbjct: 338 TDPKSPLFSLDAQPVTDSTPHVHDVEITGVRASGCKASAGFIAGLPESPVGNLVIKD 394
>gi|392939365|ref|ZP_10305009.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
gi|392291115|gb|EIV99558.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
Length = 519
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 14/179 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+S NV I C ++G D I++K+G + G+ T V +R ++ G V GSEM
Sbjct: 282 ASKNVLILGCKFSVGDDCIAIKAGKFDMAQKLGKLTEKVFVRNCYMEYGHGG-VVIGSEM 340
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF---------- 110
SGG+ V VEK ++ GI +T +GRGG+I +I + + F
Sbjct: 341 SGGVKEVYVEKCIFNNTDRGIRIKTRRGRGGFIDEIHADKIRMNRVKTPFTINSFYFCDV 400
Query: 111 -GACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNI 167
G S D + P I I K+I T+ +A F G+ E + + I
Sbjct: 401 DGKTEYVWSKEKLPID-ERTPYIGNIYLKNINCTDTQVAAGFIYGLPERKIEKVIMEEI 458
>gi|218133835|ref|ZP_03462639.1| hypothetical protein BACPEC_01724 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991210|gb|EEC57216.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 521
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 12 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 71
I++G D I++KSG G + PT+D+ +R+ ++ G +V GSE++ G+ +V +
Sbjct: 294 ISVGDDCIAIKSGKIYMGRKHKIPTSDMEVRQCCMRDGHG-AVTVGSEIAAGVKDVHIRD 352
Query: 72 IHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGACGNCGSHPDDDFD---- 125
++ G+ +T +GRG + I + + N+ F PD +
Sbjct: 353 CIFMNTDRGLRVKTRRGRGRDSVLDDISFENITMDNVMTPFVVNSFYFCDPDGKTEYVAT 412
Query: 126 ------PDALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
D PAI ++TFKDI TN +AG + G+ E+ + N+ +
Sbjct: 413 SKALPVDDRTPAIKRLTFKDIKATNCHVAGAYICGLPESKIERLTFENVDI 463
>gi|293370401|ref|ZP_06616955.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634549|gb|EFF53084.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 525
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C G DAI LKSG DE G G P +V +R + G V GSEM
Sbjct: 296 SCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGGFV-IGSEM 354
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK---------QIVISDAELYNINVAFG 111
SGG+ NV V + + G+ F++ +GRGG ++ + +DA + ++ +
Sbjct: 355 SGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADL---YY 411
Query: 112 ACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 167
A + P + PA I D+ A G+ E P NI + N+
Sbjct: 412 AVKSAPGEPVPSVSEET-PAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNM 466
>gi|423288978|ref|ZP_17267829.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|423294865|ref|ZP_17272992.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
gi|392668742|gb|EIY62236.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|392676056|gb|EIY69497.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
Length = 524
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C G DAI LKSG DE G G P +V +R + G V GSEM
Sbjct: 295 SCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGGFV-IGSEM 353
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK---------QIVISDAELYNINVAFG 111
SGG+ NV V + + G+ F++ +GRGG ++ + +DA + ++ +
Sbjct: 354 SGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADL---YY 410
Query: 112 ACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 167
A + P + PA I D+ A G+ E P NI + N+
Sbjct: 411 AAKSAPGEPIPSVSEET-PAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNM 465
>gi|418938241|ref|ZP_13491792.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
gi|375055025|gb|EHS51309.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
Length = 503
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 12 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 71
I++G D I++K+G + RPT V IR L+Q G+ V GSEMS GI +V + +
Sbjct: 289 ISVGDDCIAIKAGKRDPRGGPDRPTRRVEIRNCLMQLGHGA-VVMGSEMSRGIHDVSISR 347
Query: 72 IHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN--VAFGACGNCGSHPDDDF----D 125
H + G+ +T +GRGG + I +S + + +A A C + ++ +
Sbjct: 348 CHFVGTDRGLRIKTRRGRGGAVSDIHLSQCRMDGVATPIAVNAFYFCDADGRSEYVQSRN 407
Query: 126 PDAL----PAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISLLINPGSYNSWE 180
P L P I IT +D++ + T A F G+ E + + +S++ G+
Sbjct: 408 PLPLSIETPRISNITIRDVVVSGAETAAAVFYGLPECEIDAVSVDGLSIVYGEGAKPGLP 467
Query: 181 CSNIHGSSESVFPEPCPELENSSSNSSSTCFSLI 214
H P+L ++ + +T FSL+
Sbjct: 468 EMACH----------LPQLLHAGIVAENTRFSLL 491
>gi|312136085|ref|YP_004003423.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
gi|311776136|gb|ADQ05623.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
Length = 447
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S V I +C I +G D ++LKSG ++ P ++ I ++ G V GSEM
Sbjct: 187 SCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMAHGHGG-VVIGSEM 243
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFG-----ACGN 115
SGG+ NV + + GI +T +GRGG ++ I +S+ + N+ F CG
Sbjct: 244 SGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPFAFYMYYHCGK 303
Query: 116 CGSHPDD-DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
G D P P + +I D++ A F G+ E P ++ SN+++
Sbjct: 304 GGKEKKVWDKSPYPVDSTTPVVRRIYISDVVVREARAAAGFLYGLTEMPIEDVVFSNVTV 363
>gi|237717974|ref|ZP_04548455.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229452776|gb|EEO58567.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 524
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C G DAI LKSG DE G G P +V +R + G V GSEM
Sbjct: 295 SCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGGFV-IGSEM 353
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK---------QIVISDAELYNINVAFG 111
SGG+ NV V + + G+ F++ +GRGG ++ + +DA + ++ +
Sbjct: 354 SGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADL---YY 410
Query: 112 ACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 167
A + P + PA I D+ A G+ E P NI + N+
Sbjct: 411 AAKSAPGEPIPSVSEET-PAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNM 465
>gi|383114359|ref|ZP_09935123.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
gi|313693935|gb|EFS30770.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
Length = 524
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C G DAI LKSG DE G G P +V +R + G V GSEM
Sbjct: 295 SCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGGFV-IGSEM 353
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK---------QIVISDAELYNINVAFG 111
SGG+ NV V + + G+ F++ +GRGG ++ + +DA + ++ +
Sbjct: 354 SGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADL---YY 410
Query: 112 ACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 167
A + P + PA I D+ A G+ E P NI + N+
Sbjct: 411 AAKSAPGEPIPSVSEET-PAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNM 465
>gi|314949481|ref|ZP_07852816.1| conserved domain protein [Enterococcus faecium TX0082]
gi|430834090|ref|ZP_19452099.1| glycosyl hydrolase [Enterococcus faecium E0679]
gi|313644095|gb|EFS08675.1| conserved domain protein [Enterococcus faecium TX0082]
gi|430485613|gb|ELA62513.1| glycosyl hydrolase [Enterococcus faecium E0679]
Length = 269
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV + +C +A G D I++KSG D G R ++ + + R ++S G V GSE+
Sbjct: 41 SSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEV 98
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S G+S+V + I + S GI +++K RGG I+ I + + + ++ F
Sbjct: 99 SAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 148
>gi|312621274|ref|YP_004022887.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201741|gb|ADQ45068.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
Length = 447
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S V I +C I +G D ++LKSG ++ P ++ I ++ G V GSEM
Sbjct: 187 SCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCIMAHGHGG-VVIGSEM 243
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFG-----ACGN 115
SGG+ NV + + GI +T +GRGG ++ I +S+ + N+ F CG
Sbjct: 244 SGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPFAFYMYYHCGK 303
Query: 116 CGSHPDD-DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
G D P ++ P + +I D++ A F G+ E P ++ SN+++
Sbjct: 304 GGKEKRVWDKSPYPVDESTPIVRRIYISDVVVREARAAAGFLYGLTEMPIEDVVFSNVTV 363
>gi|160886912|ref|ZP_02067915.1| hypothetical protein BACOVA_04926 [Bacteroides ovatus ATCC 8483]
gi|156107323|gb|EDO09068.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 518
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C G DAI LKSG DE G G P +V +R + G V GSEM
Sbjct: 289 SCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGGFV-IGSEM 347
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK---------QIVISDAELYNINVAFG 111
SGG+ NV V + + G+ F++ +GRGG ++ + +DA + ++ +
Sbjct: 348 SGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADL---YY 404
Query: 112 ACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 167
A + P + PA I D+ A G+ E P NI + N+
Sbjct: 405 AAKSAPGEPIPSVSEET-PAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNM 459
>gi|381180485|ref|ZP_09889325.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
gi|380767666|gb|EIC01665.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
Length = 453
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +NV IEDC +++G D I +KSG GI +PT +V IR ++++ G + GSE
Sbjct: 221 SCENVVIEDCFVSVGDDGICIKSGSGPDGIRCAKPTVNVEIRNCTVRNAHG-GIVIGSET 279
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYN 105
+ G+S++ L + GI ++ +GRGG I I + D + N
Sbjct: 280 AAGMSHIHAVGCDLSGTDRGIRIKSRRGRGGDIFDIELRDMVMNN 324
>gi|374374281|ref|ZP_09631940.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233723|gb|EHP53517.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 465
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 7/173 (4%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S NV IE+C+ G DAI++KSG + G P+ ++ IR +++ VA GSE+S
Sbjct: 274 SQNVLIENCVFDQGDDAIAIKSGRNPEGWRLKTPSKNIVIRNCTVKNGH-QLVAIGSELS 332
Query: 62 GGISNVQVEKIHLYD--SLNGIEF-RTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS 118
GGI NV ++ + D LN + F +T + GGY+K I S+ I++
Sbjct: 333 GGIENVFIDHCTVLDGAKLNHLLFIKTNERMGGYVKNIYASNIRSGKIDLGILGIETDVL 392
Query: 119 HPDDDFDP---DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNIS 168
+ D P L I I +I + + G + P + L N++
Sbjct: 393 YQWRDLVPTYEKRLTPIKDIFLTNIHASEVKFIARVLGQKALPVETVSLKNVT 445
>gi|375148498|ref|YP_005010939.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062544|gb|AEW01536.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 547
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S + V IE+ +G D + +KSG DE G G PT +V IR + + G V GSEM
Sbjct: 274 SCNRVLIENSSFDVGDDGLCMKSGRDEAGRKRGMPTENVIIRDCKVYHAHGGFV-IGSEM 332
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI 106
SGG N+ V + G+ F+TT+GRGG ++ I +D ++ +I
Sbjct: 333 SGGARNIWVNNCTFIGTDIGLRFKTTRGRGGIVENIYCNDIQMIDI 378
>gi|218129054|ref|ZP_03457858.1| hypothetical protein BACEGG_00628 [Bacteroides eggerthii DSM 20697]
gi|217988689|gb|EEC55008.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 492
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 74/175 (42%), Gaps = 11/175 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE C + G D +LK+G + G+ G+ T +V IR L Q G + GSE
Sbjct: 234 SCKNVLIEYCTLNCGDDCFTLKAGRADDGLRVGKATENVVIRHSLAQHGHG-GITIGSET 292
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF--GACGN--- 115
+G I N+ V + GI F+T + RGG + + N+ AF GN
Sbjct: 293 AGMIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSNHTIYERLRMINVGKAFTWDLLGNAYY 352
Query: 116 ----CGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
+P+ D P I KD I + GI E PF+N + N
Sbjct: 353 MGELAARYPERAVD-HLTPNISNTVIKDFIVESSKQFFTANGIPEIPFSNTLIEN 406
>gi|302872741|ref|YP_003841377.1| polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
gi|302575600|gb|ADL43391.1| Polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
Length = 447
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S V I +C I +G D ++LKSG ++ P ++ I ++ G V GSEM
Sbjct: 187 SCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCIMAHGHGG-VVIGSEM 243
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFG-----ACGN 115
SGG+ NV + + GI +T +GRGG ++ I +S+ + N+ F CG
Sbjct: 244 SGGVRNVVISNCVFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPFAFYMYYHCGK 303
Query: 116 CGSHPDD-DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
G D P P + +I D++ A F G+ E P ++ SN+++
Sbjct: 304 GGKEKKVWDKSPYPVDSTTPVVRRIYISDVVVREARAAAGFLYGLTEMPIEDVVFSNVTV 363
>gi|423301929|ref|ZP_17279952.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
gi|408471020|gb|EKJ89552.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
Length = 546
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + + G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 296 SCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 354
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ VE + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 355 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLLFDLFYGGK 414
Query: 114 GNCGSHPDDDF---DPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G G ++D A+P + + T F++I +NI G+ F G+ E P N+
Sbjct: 415 G-AGEESEEDLLNRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLPEMPITNVT 473
Query: 164 LSNISL 169
+ ++ +
Sbjct: 474 VKDVVM 479
>gi|227536102|ref|ZP_03966151.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
gi|227243999|gb|EEI94014.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
Length = 577
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 100/232 (43%), Gaps = 20/232 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV +E+ +G D I +KSG DE G PT +V IR ++ + G V GSEM
Sbjct: 303 SCKNVLVENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRNNVVYHAHGGFV-IGSEM 361
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGA- 112
SGG N+ V + G+ F+TT+GRGG ++ I I +++I ++ + A
Sbjct: 362 SGGARNIWVYDCSFIGTDIGLRFKTTRGRGGVVENIFIDRISMFDIPGEAILVDMYYEAK 421
Query: 113 -----CGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLS 165
G+ P +A P KD++ A F G+ E + L
Sbjct: 422 DPIPLIGDKQEAVKAVTLPVTEATPQFRNFKIKDVVVNGADKAIFFRGLPEMNIKGMSLE 481
Query: 166 NISLLINPGSYNSWECSNIHGSSESVF-PEPCPELENSSSNSSSTCFSLIRY 216
NIS+ G E ++I + V PE P + NS + FS Y
Sbjct: 482 NISIKSKKG-IEIIESTDIELKNVKVITPETKPVVH--IDNSQNIKFSTFSY 530
>gi|300772072|ref|ZP_07081942.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760375|gb|EFK57201.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 570
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 100/232 (43%), Gaps = 20/232 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV +E+ +G D I +KSG DE G PT +V IR ++ + G V GSEM
Sbjct: 296 SCKNVLVENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRNNVVYHAHGGFV-IGSEM 354
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGA- 112
SGG N+ V + G+ F+TT+GRGG ++ I I +++I ++ + A
Sbjct: 355 SGGARNIWVYDCSFIGTDIGLRFKTTRGRGGIVENIFIDRISMFDIPGEAILADMYYEAK 414
Query: 113 -----CGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLS 165
G+ P +A P KD++ A F G+ E + L
Sbjct: 415 DPIPLIGDKQEAVKAVTLPVTEATPQFRNFKIKDVVVNGADKAIFFRGLPEMNIKGMSLE 474
Query: 166 NISLLINPGSYNSWECSNIHGSSESVF-PEPCPELENSSSNSSSTCFSLIRY 216
NIS+ G E ++I + V PE P + NS + FS Y
Sbjct: 475 NISIKSKKG-IEIIESTDIELKNVKVITPETKPVVH--IDNSQNIKFSAFSY 523
>gi|393786780|ref|ZP_10374912.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
gi|392658015|gb|EIY51645.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
Length = 536
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + + G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 294 SCKNALIINSLFDAGDDAICIKSGKDEDGRRRGEPCQNVLVKNNTVLHGHGGFVV-GSEM 352
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ V + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 353 SGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYINNINMINIPNEPLLFDLFYGGK 412
Query: 114 GNCGSHPDDDFDPDA---LPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G G +++ + LP + + T FKDI TN+ G+ F G+ E P NI
Sbjct: 413 G-PGEETEEERAANTKTDLPPVTEETPAFKDIHITNVNCKGSGRAMFFNGLPEMPIRNIT 471
Query: 164 LSNISL 169
+ N+ +
Sbjct: 472 VKNVVI 477
>gi|312794141|ref|YP_004027064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181281|gb|ADQ41451.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 447
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S V I +C I +G D ++LKSG ++ P ++ I ++ G V GSEM
Sbjct: 187 SCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMAHGHGG-VVIGSEM 243
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFG-----ACGN 115
SGG+ NV + + GI +T +GRGG ++ I +S+ + N+ F CG
Sbjct: 244 SGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPFAFYMYYHCGK 303
Query: 116 CGSHPDD-DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
G D P P + +I D++ A F G+ E P ++ SN+++
Sbjct: 304 GGKEKRVWDKSPYPVDSTTPIVRRIYISDVVVREARAAAGFLYGLTEMPIEDVVFSNVTV 363
>gi|317474838|ref|ZP_07934108.1| glycoside hydrolase [Bacteroides eggerthii 1_2_48FAA]
gi|316908976|gb|EFV30660.1| glycoside hydrolase [Bacteroides eggerthii 1_2_48FAA]
Length = 492
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 74/175 (42%), Gaps = 11/175 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N+ IE C + G D +LK+G + G+ G+ T +V IR L Q G + GSE
Sbjct: 234 SCKNILIEYCTLNCGDDCFTLKAGRADDGLRVGKATENVVIRHSLAQHGHG-GITIGSET 292
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF--GACGN--- 115
+G I N+ V + GI F+T + RGG + + N+ AF GN
Sbjct: 293 AGMIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSNHTIYERLRMINVGKAFTWDLLGNAYY 352
Query: 116 ----CGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
+P+ D P I KD I + GI E PF+N + N
Sbjct: 353 MGELAARYPERAVD-HLTPNISNTVIKDFIVESSKQFFTANGIPEIPFSNTLIEN 406
>gi|431796697|ref|YP_007223601.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787462|gb|AGA77591.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 539
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 9/192 (4%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IE + G D ++K+G + GI +PT +V +R L + G + GSE
Sbjct: 280 SSRNVLIEYSTLNNGDDCFTMKAGRGKDGIRVNKPTENVVVRYCLAKEGHG-GITIGSET 338
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFG--------A 112
+G I+N+ + ++ GI F+T + RGG + + + AF
Sbjct: 339 AGKINNLYIHDCVFDNTGVGIRFKTRRPRGGGGQNLYYERLRMNLRQTAFRWDMLGQELY 398
Query: 113 CGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLIN 172
G+ D P IT KDI+ + N GI E+P N+ + N+ + +
Sbjct: 399 VGDLAKRKPPRAVNDLTPKFKDITIKDILVETASTFVNINGIPESPLENLHMENVVVKDS 458
Query: 173 PGSYNSWECSNI 184
+N+ + N+
Sbjct: 459 RRFFNADDAKNL 470
>gi|256424483|ref|YP_003125136.1| G-D-S-L family lipolytic protein [Chitinophaga pinensis DSM 2588]
gi|256039391|gb|ACU62935.1| lipolytic protein G-D-S-L family [Chitinophaga pinensis DSM 2588]
Length = 727
Score = 66.6 bits (161), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 7 IEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISN 66
IE C +G D I +KSG DE G G T DV + + + G V GSEMSGG N
Sbjct: 511 IEGCTFDVGDDGICIKSGRDEQGRKRGVATEDVIVNNCTVYHAHGGFVV-GSEMSGGARN 569
Query: 67 VQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI 106
+ V + G+ F+TT+GRGG +++I +++ + +I
Sbjct: 570 LFVSNCSFLGTDIGLRFKTTRGRGGIVEKIYVNNINMKDI 609
>gi|261207238|ref|ZP_05921927.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289567178|ref|ZP_06447568.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|294614358|ref|ZP_06694275.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430850287|ref|ZP_19468050.1| glycosyl hydrolase [Enterococcus faecium E1185]
gi|260078866|gb|EEW66568.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289161037|gb|EFD08947.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|291592830|gb|EFF24422.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430535912|gb|ELA76303.1| glycosyl hydrolase [Enterococcus faecium E1185]
Length = 436
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV I +C +A G D I++KSG D G R ++ + + R ++S G V GSE+
Sbjct: 208 SSTNVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEV 265
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S G+S+V + I + S GI +++K RGG I+ I + + + ++ F
Sbjct: 266 SAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 315
>gi|257883313|ref|ZP_05662966.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|294622163|ref|ZP_06701235.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|424791207|ref|ZP_18217685.1| polygalacturonase [Enterococcus faecium V689]
gi|424796702|ref|ZP_18222393.1| polygalacturonase [Enterococcus faecium S447]
gi|424949498|ref|ZP_18365166.1| polygalacturonase [Enterococcus faecium R496]
gi|424953671|ref|ZP_18368620.1| polygalacturonase [Enterococcus faecium R494]
gi|424956677|ref|ZP_18371442.1| polygalacturonase [Enterococcus faecium R446]
gi|424968089|ref|ZP_18381747.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994453|ref|ZP_18406390.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998615|ref|ZP_18410289.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001111|ref|ZP_18412641.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005192|ref|ZP_18416457.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011657|ref|ZP_18422540.1| polygalacturonase [Enterococcus faecium E422]
gi|425017825|ref|ZP_18428310.1| polygalacturonase [Enterococcus faecium C621]
gi|425032265|ref|ZP_18437333.1| polygalacturonase [Enterococcus faecium 515]
gi|425039363|ref|ZP_18443906.1| polygalacturonase [Enterococcus faecium 513]
gi|427397514|ref|ZP_18889996.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430860949|ref|ZP_19478544.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430968697|ref|ZP_19487858.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|431017550|ref|ZP_19490427.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|431261224|ref|ZP_19505721.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|431777891|ref|ZP_19566132.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|431783620|ref|ZP_19571718.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|431786792|ref|ZP_19574790.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|447913735|ref|YP_007395147.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|257818971|gb|EEV46299.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|291598332|gb|EFF29421.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|402919873|gb|EJX40434.1| polygalacturonase [Enterococcus faecium V689]
gi|402922629|gb|EJX42990.1| polygalacturonase [Enterococcus faecium S447]
gi|402934203|gb|EJX53573.1| polygalacturonase [Enterococcus faecium R496]
gi|402938575|gb|EJX57571.1| polygalacturonase [Enterococcus faecium R494]
gi|402945373|gb|EJX63728.1| polygalacturonase [Enterococcus faecium R446]
gi|402952951|gb|EJX70715.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980028|gb|EJX95661.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982462|gb|EJX97925.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987164|gb|EJY02253.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987438|gb|EJY02501.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995993|gb|EJY10403.1| polygalacturonase [Enterococcus faecium E422]
gi|403003651|gb|EJY17535.1| polygalacturonase [Enterococcus faecium C621]
gi|403013574|gb|EJY26660.1| polygalacturonase [Enterococcus faecium 515]
gi|403016109|gb|EJY28944.1| polygalacturonase [Enterococcus faecium 513]
gi|425722190|gb|EKU85087.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430551267|gb|ELA91036.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430554867|gb|ELA94435.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|430559249|gb|ELA98609.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|430576629|gb|ELB15266.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|430638495|gb|ELB74426.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|430644804|gb|ELB80385.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|430644943|gb|ELB80507.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|445189444|gb|AGE31086.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 436
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV + +C +A G D I++KSG D G R ++ + + R ++S G V GSE+
Sbjct: 208 SSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEV 265
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S G+S+V + I+ + S GI +++K RGG I+ I + + + ++ F
Sbjct: 266 SAGVSDVYIHDINFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 315
>gi|255594301|ref|XP_002536062.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223521016|gb|EEF26321.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 412
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 6/189 (3%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V IE I G D I++KSG P+ D+ IR G S+ GSE+
Sbjct: 202 SSSHVLIEHVTIDTGDDNIAIKSGQPN-SPGGDEPSHDIVIRDSTFLHGHGLSI--GSEV 258
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
+GG+ NV E+IH + G+ ++ + RG +K V D ++ ++N P
Sbjct: 259 AGGVYNVLAERIHFKGTGTGVRIKSNRDRGNELKHFVYRDLKMEDVNTPILISEFYPKIP 318
Query: 121 DD-DFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSYN 177
D D P P IT +++ T A G+ E+P + L+N+ + + G+
Sbjct: 319 DVIDSQPVGRLTPRFSDITIENLTATGARQAAIIVGLPESPVTGLKLTNVRIKADKGAVI 378
Query: 178 SWECSNIHG 186
+ + G
Sbjct: 379 KYAHMDTKG 387
>gi|346224313|ref|ZP_08845455.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 572
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 18/186 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I + +G DAI KSG +E G G PT +V ++ ++ G V GSEM
Sbjct: 298 SCKNVLIYNNSFDVGDDAICFKSGKNEDGRRRGVPTENVIVKNNVVYHGHGGFV-IGSEM 356
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGA- 112
SGG+ NV V + G+ F++T+GRGG ++ I I + ++ +I N+ +G
Sbjct: 357 SGGVRNVHVANCTFIGTDVGLRFKSTRGRGGVVENIYIFNIDMIDIPTEPIRFNLFYGGN 416
Query: 113 ---CGNCGSHPDDDFDPDALPAIDQI-TFKDIIGTNITI-----AGNFTGIQEAPFANIC 163
+ G+ + +P ++ +F++I NI A F G+ E NI
Sbjct: 417 APLLDDGGNSVPSGKEAKPVPVTEETPSFRNIFMKNIRANGFGNAAFFMGLPEMNLQNIH 476
Query: 164 LSNISL 169
L N L
Sbjct: 477 LENAVL 482
>gi|116619804|ref|YP_821960.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222966|gb|ABJ81675.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V I D I G D I LKSG D GI RPT V I + + G+ V GSE
Sbjct: 260 SSRFVHISDSYIDTGDDGIVLKSGKDADGIRVNRPTEHVTITNCTVHHAHGA-VVIGSET 318
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV--------AFGA 112
+G I +V I D+ NGI ++ +GRGG + + + + N+ G
Sbjct: 319 AGSIRDVVASNITAIDTENGIRIKSRRGRGGTVDDLRFDNWTMENVGTGIVVTSYYVMGG 378
Query: 113 CGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAG-----NFTGIQEAPFANICLSNI 167
+ P + P F++I +N+TI G + G+ E P + L+++
Sbjct: 379 ESDTKEEPVSERTPK---------FRNIGISNVTIHGAKKVVDIDGLPEMPITGLRLTDV 429
Query: 168 S 168
+
Sbjct: 430 A 430
>gi|431703877|ref|ZP_19525103.1| glycosyl hydrolase [Enterococcus faecium E1904]
gi|430596723|gb|ELB34539.1| glycosyl hydrolase [Enterococcus faecium E1904]
Length = 436
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV + +C +A G D I++KSG D G R ++ + + R ++S G V GSE+
Sbjct: 208 SSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEV 265
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S G+S+V + I + S GI +++K RGG I+ I + + + ++ F
Sbjct: 266 SAGVSDVYIRDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 315
>gi|317056840|ref|YP_004105307.1| glycoside hydrolase family protein [Ruminococcus albus 7]
gi|315449109|gb|ADU22673.1| glycoside hydrolase family 28 [Ruminococcus albus 7]
Length = 513
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 17/184 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+ DNV I C ++G D I++KSG + G + +P + +IR L+Q G +V GSEM
Sbjct: 273 ACDNVWISGCRFSVGDDCIAIKSGKIDIGRKFKQPAENHNIRNCLMQFGHG-AVTLGSEM 331
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYN------INVAFGA 112
+GG+ N+ VE+ + G+ +T +GRG I ++ ++ IN+ +
Sbjct: 332 AGGVRNLTVERCIFDHTDRGLRIKTRRGRGKDAVIDGVLFEKMKMNGVLTPIVINMWYNC 391
Query: 113 CGNCGSHPDDDFDPDALPAID------QITFKDIIGTNITIAGNF-TGIQEAPFANICLS 165
C + + + + + LP D + TF+D+ + ++A + G+ E P + I +
Sbjct: 392 C-DPDRYSEYNTTREKLPVDDRTPYLGKFTFRDMECLDCSVAACYCDGLPEMPISEINVE 450
Query: 166 NISL 169
+I
Sbjct: 451 DIHF 454
>gi|430854301|ref|ZP_19472017.1| glycosyl hydrolase [Enterococcus faecium E1258]
gi|430539030|gb|ELA79293.1| glycosyl hydrolase [Enterococcus faecium E1258]
Length = 436
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV + +C +A G D I++KSG D G R ++ + + R ++S G V GSE+
Sbjct: 208 SSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEV 265
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S G+S+V + I + S GI +++K RGG I+ I + + + ++ F
Sbjct: 266 SAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 315
>gi|431797010|ref|YP_007223914.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787775|gb|AGA77904.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 455
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 7/174 (4%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N+ IE+CI G DAI++KSG ++ PT ++ IR L+++ +A GSE+S
Sbjct: 263 SQNMLIENCIFDQGDDAIAVKSGRNQDAWRLNMPTKNIVIRNSLVKNGH-QLLAIGSELS 321
Query: 62 GGISNVQVEKIHLYD--SLNGIEF-RTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS 118
GG+ NV +E + + LN + + +T + RGGY++ + + + + I+
Sbjct: 322 GGVENVYMENCEVQEGAKLNHLLYVKTNERRGGYVRNVHMKNIQCGKIDKGVLGIETDVL 381
Query: 119 HPDDDFDP---DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ D P L I+ I +++ ++ E+P + L NI +
Sbjct: 382 YQWRDLVPTYERRLTPIENIYMENVRAADVAFVSRIKADPESPVEVVQLKNIQV 435
>gi|357386032|ref|YP_004900756.1| Polygalacturonase [Pelagibacterium halotolerans B2]
gi|351594669|gb|AEQ53006.1| Polygalacturonase [Pelagibacterium halotolerans B2]
Length = 508
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 16/186 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSG--WDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGS 58
SS ++ I ++G D I++K+G W + + PT +V +R L++ G V GS
Sbjct: 279 SSTDIEIVGVRFSVGDDCIAIKAGKIWPDGTVPA--PTRNVSVRHCLMERGHGG-VVIGS 335
Query: 59 EMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS 118
EMSG +++V V + D+ G+ +T +GRGG + +IV+SD + + +
Sbjct: 336 EMSGSVTDVTVAFCTMRDTDRGLRIKTRRGRGGAVARIVLSDCLMDGVKTPLSINSHYFC 395
Query: 119 HPDDDFDP----------DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNI 167
PD D A P I I F+ N A + G+ EAP + + ++++
Sbjct: 396 DPDGRSDAVQNRAPAPVSAATPKIGDIRFERTEVKNAHHALAYVLGLAEAPVSGLTIADV 455
Query: 168 SLLINP 173
S+ P
Sbjct: 456 SVTYAP 461
>gi|160936546|ref|ZP_02083913.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
gi|158440337|gb|EDP18082.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
Length = 522
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 18/184 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V I ++G D I++KSG G Y RP+ D+ IRR ++ G SV GSEM
Sbjct: 281 SCQDVEIAGVYFSLGDDCIAVKSGKIYMGSTYKRPSKDISIRRCCMRDGHG-SVTIGSEM 339
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGACGNCGS 118
+GG+ N+ V+ + G+ +T +GRG + IV + ++ F NC
Sbjct: 340 AGGVKNLTVKDCMFLHTDRGLRIKTRRGRGKDAVVDGIVFEHIRMDHVMTPFVI--NCFY 397
Query: 119 HPDDD------------FDPDALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLS 165
D D + P I + FKDI N +A + G+ E + +
Sbjct: 398 FCDPDGHSEYVRTKEALLVDERTPLIKSLCFKDIEAENCHVAAAYMYGLPEQRIERVEMD 457
Query: 166 NISL 169
++ +
Sbjct: 458 HVRV 461
>gi|280977865|gb|ACZ98650.1| polygalacturonase [Cellulosilyticum ruminicola]
Length = 518
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 14/170 (8%)
Query: 13 AMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKI 72
++G D I++KSG + RP+ ++ IR L+Q G+ V GSEMSGG+ NV VE+
Sbjct: 291 SLGDDCIAIKSGKISIPLKERRPSENIIIRNCLMQYGHGA-VVLGSEMSGGVKNVFVERC 349
Query: 73 HLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGACGNCGSHPDDDFD----- 125
D+ G+ +T +GRG I QI + + ++ + F PD +
Sbjct: 350 FFEDTDRGLRIKTRRGRGNTAIIDQIYVKNIQMKGVLTPFTLNAFYFCDPDGKTEYVRTK 409
Query: 126 -----PDALPAIDQITFKDIIGTNITI-AGNFTGIQEAPFANICLSNISL 169
+ P I + F+++ + I AG G+ E ++ NIS+
Sbjct: 410 EKLAVDERTPLIGSLEFENMECKDAEICAGFIYGLPEQKVKSLTFKNISI 459
>gi|408501581|ref|YP_006865500.1| pectinesterase [Bifidobacterium asteroides PRL2011]
gi|408466405|gb|AFU71934.1| pectinesterase [Bifidobacterium asteroides PRL2011]
Length = 1519
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 13/152 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV I + G D ++KSG D GIA RP+ +++ R + S G V GSEM
Sbjct: 349 SSSNVWILGTSFSTGDDCSAIKSGKDAEGIAIARPSENIYFRGDVFNSGHG-GVTIGSEM 407
Query: 61 SGGISNVQVEKIHLY------DSLN-GIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
SGG+ NV VE + ++N GI + + RGGY++ I + D+ + I+V
Sbjct: 408 SGGVRNVFVEDSTIVPVDLTSGAVNPGIRVKVSPKRGGYVRNIQVRDSVINKISV----I 463
Query: 114 GNCGSHPDDDFDPDA-LPAIDQITFKDIIGTN 144
N DD D LP + F I N
Sbjct: 464 TNYDRTSVDDLDSQTPLPQTENFKFSHITAPN 495
>gi|294807547|ref|ZP_06766344.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345512393|ref|ZP_08791923.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
gi|294445248|gb|EFG13918.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345453872|gb|EEO50012.2| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
Length = 529
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + + G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 287 SCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 345
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ VE + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 346 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLLFDLFYGGK 405
Query: 114 GNCGSHPDDDF---DPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G G ++D ++P + + T F +I +NI G+ F G+ E P +NI
Sbjct: 406 G-AGEESEEDLLNRMKTSIPPVTEETPAFCNIHISNIVCRGSGRAMFFNGLPEMPISNIT 464
Query: 164 LSNISL 169
+ N+ +
Sbjct: 465 VKNVVM 470
>gi|430824494|ref|ZP_19443051.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430868568|ref|ZP_19482862.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|431744399|ref|ZP_19533267.1| glycosyl hydrolase [Enterococcus faecium E2071]
gi|430441022|gb|ELA51165.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430548832|gb|ELA88680.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|430605142|gb|ELB42547.1| glycosyl hydrolase [Enterococcus faecium E2071]
Length = 436
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV + +C +A G D I++KSG D G R ++ + + R ++S G V GSE+
Sbjct: 208 SSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEV 265
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S G+S+V + I + S GI +++K RGG I+ I + + + ++ F
Sbjct: 266 SAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 315
>gi|262408522|ref|ZP_06085068.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646518|ref|ZP_06724155.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|262353387|gb|EEZ02481.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638137|gb|EFF56518.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
Length = 539
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + + G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 297 SCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 355
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ VE + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLLFDLFYGGK 415
Query: 114 GNCGSHPDDDF---DPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G G ++D ++P + + T F +I +NI G+ F G+ E P +NI
Sbjct: 416 G-AGEESEEDLLNRMKTSIPPVTEETPAFCNIHISNIVCRGSGRAMFFNGLPEMPISNIT 474
Query: 164 LSNISL 169
+ N+ +
Sbjct: 475 VKNVVM 480
>gi|257886390|ref|ZP_05666043.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
gi|257822246|gb|EEV49376.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
Length = 436
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV + +C +A G D I++KSG D G R ++ + + R ++S G V GSE+
Sbjct: 208 SSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEV 265
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S G+S+V + I + S GI +++K RGG I+ I + + + ++ F
Sbjct: 266 SAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 315
>gi|257880502|ref|ZP_05660155.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257891467|ref|ZP_05671120.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257894590|ref|ZP_05674243.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260562501|ref|ZP_05833011.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|293559900|ref|ZP_06676412.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|293568218|ref|ZP_06679552.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|314938533|ref|ZP_07845818.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942449|ref|ZP_07849289.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314952938|ref|ZP_07855905.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992207|ref|ZP_07857650.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995236|ref|ZP_07860348.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329848|ref|YP_005355732.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|406581503|ref|ZP_11056645.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583794|ref|ZP_11058839.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586138|ref|ZP_11061075.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591702|ref|ZP_11065948.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936303|ref|ZP_11368170.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|415891700|ref|ZP_11549789.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|416141648|ref|ZP_11599441.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|424845982|ref|ZP_18270582.1| polygalacturonase [Enterococcus faecium R501]
gi|424854970|ref|ZP_18279301.1| polygalacturonase [Enterococcus faecium R499]
gi|424907683|ref|ZP_18331153.1| polygalacturonase [Enterococcus faecium R497]
gi|424960554|ref|ZP_18375059.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964733|ref|ZP_18378800.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971125|ref|ZP_18384586.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974628|ref|ZP_18387853.1| polygalacturonase [Enterococcus faecium P1137]
gi|424981126|ref|ZP_18393878.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983701|ref|ZP_18396276.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987499|ref|ZP_18399873.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424992279|ref|ZP_18404358.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007167|ref|ZP_18418312.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014690|ref|ZP_18425355.1| polygalacturonase [Enterococcus faecium E417]
gi|425021599|ref|ZP_18431838.1| polygalacturonase [Enterococcus faecium C497]
gi|425023083|ref|ZP_18433222.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034686|ref|ZP_18439563.1| polygalacturonase [Enterococcus faecium 514]
gi|425042059|ref|ZP_18446425.1| polygalacturonase [Enterococcus faecium 511]
gi|425046653|ref|ZP_18450650.1| polygalacturonase [Enterococcus faecium 510]
gi|425047905|ref|ZP_18451836.1| polygalacturonase [Enterococcus faecium 509]
gi|425051840|ref|ZP_18455481.1| polygalacturonase [Enterococcus faecium 506]
gi|425060678|ref|ZP_18463962.1| polygalacturonase [Enterococcus faecium 503]
gi|430821821|ref|ZP_19440408.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430827440|ref|ZP_19445583.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430830082|ref|ZP_19448148.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430832646|ref|ZP_19450686.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430845573|ref|ZP_19463457.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430848406|ref|ZP_19466225.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430856188|ref|ZP_19473891.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430921156|ref|ZP_19485323.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|431220446|ref|ZP_19501380.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|431243678|ref|ZP_19503851.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|431323331|ref|ZP_19509135.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|431388094|ref|ZP_19511700.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|431472779|ref|ZP_19514507.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|431520920|ref|ZP_19516634.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|431565479|ref|ZP_19519841.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|431747812|ref|ZP_19536581.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|431750357|ref|ZP_19539076.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|431755435|ref|ZP_19544084.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|431761409|ref|ZP_19549983.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|431766527|ref|ZP_19555004.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|431769102|ref|ZP_19557530.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|431771653|ref|ZP_19560033.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|431774523|ref|ZP_19562830.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|431780630|ref|ZP_19568803.1| glycosyl hydrolase [Enterococcus faecium E4389]
gi|257814730|gb|EEV43488.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257827827|gb|EEV54453.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257830969|gb|EEV57576.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260073186|gb|EEW61531.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|291589118|gb|EFF20932.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|291606172|gb|EFF35594.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|313590492|gb|EFR69337.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593265|gb|EFR72110.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595010|gb|EFR73855.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598757|gb|EFR77602.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642161|gb|EFS06741.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|364090042|gb|EHM32674.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|364093760|gb|EHM35997.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|378939542|gb|AFC64614.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|402919810|gb|EJX40376.1| polygalacturonase [Enterococcus faecium R501]
gi|402930037|gb|EJX49740.1| polygalacturonase [Enterococcus faecium R497]
gi|402931903|gb|EJX51454.1| polygalacturonase [Enterococcus faecium R499]
gi|402945951|gb|EJX64271.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947336|gb|EJX65555.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955971|gb|EJX73460.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959993|gb|EJX77186.1| polygalacturonase [Enterococcus faecium P1139]
gi|402964601|gb|EJX81373.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970834|gb|EJX87147.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402973957|gb|EJX90038.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402974321|gb|EJX90380.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402995601|gb|EJY10044.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402998000|gb|EJY12285.1| polygalacturonase [Enterococcus faecium E417]
gi|403006140|gb|EJY19807.1| polygalacturonase [Enterococcus faecium C497]
gi|403010837|gb|EJY24182.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019832|gb|EJY32411.1| polygalacturonase [Enterococcus faecium 514]
gi|403023546|gb|EJY35791.1| polygalacturonase [Enterococcus faecium 510]
gi|403024469|gb|EJY36625.1| polygalacturonase [Enterococcus faecium 511]
gi|403032233|gb|EJY43801.1| polygalacturonase [Enterococcus faecium 509]
gi|403036566|gb|EJY47912.1| polygalacturonase [Enterococcus faecium 506]
gi|403042389|gb|EJY53347.1| polygalacturonase [Enterococcus faecium 503]
gi|404452562|gb|EJZ99746.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456117|gb|EKA02874.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461646|gb|EKA07540.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467225|gb|EKA12407.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735249|gb|EKQ77163.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|430438093|gb|ELA48581.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430444048|gb|ELA53960.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430479137|gb|ELA56411.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430479701|gb|ELA56917.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430495380|gb|ELA71555.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430534977|gb|ELA75402.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430545274|gb|ELA85257.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430554049|gb|ELA93721.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|430569541|gb|ELB08542.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|430571647|gb|ELB10533.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|430577979|gb|ELB16555.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|430580359|gb|ELB18832.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|430583564|gb|ELB21926.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|430585063|gb|ELB23364.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|430589388|gb|ELB27517.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|430604699|gb|ELB42134.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|430609784|gb|ELB46961.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|430616657|gb|ELB53552.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|430621550|gb|ELB58311.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|430626087|gb|ELB62675.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|430628018|gb|ELB64476.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|430632927|gb|ELB69117.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|430633928|gb|ELB70073.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|430639085|gb|ELB74967.1| glycosyl hydrolase [Enterococcus faecium E4389]
Length = 436
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV + +C +A G D I++KSG D G R ++ + + R ++S G V GSE+
Sbjct: 208 SSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEV 265
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S G+S+V + I + S GI +++K RGG I+ I + + + ++ F
Sbjct: 266 SAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 315
>gi|424978123|ref|ZP_18391071.1| polygalacturonase [Enterococcus faecium P1123]
gi|402963044|gb|EJX79942.1| polygalacturonase [Enterococcus faecium P1123]
Length = 426
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV + +C +A G D I++KSG D G R ++ + + R ++S G V GSE+
Sbjct: 198 SSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEV 255
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S G+S+V + I + S GI +++K RGG I+ I + + + ++ F
Sbjct: 256 SAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 305
>gi|293557205|ref|ZP_06675755.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
gi|291600657|gb|EFF30959.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
Length = 443
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV + +C +A G D I++KSG D G R ++ + + R ++S G V GSE+
Sbjct: 215 SSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEV 272
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S G+S+V + I + S GI +++K RGG I+ I + + + ++ F
Sbjct: 273 SAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 322
>gi|355673331|ref|ZP_09058928.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
gi|354814797|gb|EHE99396.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
Length = 532
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 14/186 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V I ++G D I++KSG G Y RP+ D+ + R ++ GS V GSEM
Sbjct: 292 SCRDVEITGICFSVGDDCIAVKSGKIYMGTTYKRPSEDIVVSRCCMRDGHGS-VTIGSEM 350
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGACGNCGS 118
+GG+ N+ V + G+ +T +GRG + I+ + + F
Sbjct: 351 AGGVKNLTVRDCVFRHTDRGLRIKTRRGRGKNAVVDGILFERIHMDQVKTPFVINSFYYC 410
Query: 119 HPDDDFD----------PDALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNI 167
PD + + D P I +TF+DI N +A + G+ E + + +
Sbjct: 411 DPDGNSEYVRTKERLPVDDRTPWIKHLTFRDIEAVNCHVAAAYLYGLPERKIGKVEMERV 470
Query: 168 SLLINP 173
S+ P
Sbjct: 471 SISFTP 476
>gi|253688511|ref|YP_003017701.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251755089|gb|ACT13165.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 437
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 16/185 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGI-AYGRPTTDVHIRRVLLQSSSGSSVAFGSE 59
SS V + I+ G D IS+KSG + A R T HI QS +G ++ GSE
Sbjct: 224 SSRQVHLHHLNISTGDDNISVKSGLAKRADDAESRDITIDHI-----QSENGHGISIGSE 278
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN---VAFGACGNC 116
GI V ++ +H + NG+ ++ + RG I ++I + + + V + G
Sbjct: 279 TINGIGKVTLQDLHFTGTENGVRIKSGRDRGANIGPVIIRNVTMQQVKTPLVITDSYGGN 338
Query: 117 GSHPDDDFDP-------DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
G + D P P I +T + I + T AG +G+ EAP NI L ++ +
Sbjct: 339 GGYSSDSVSPIKYQTLTTTTPNIHDVTLQHIEASGATHAGIISGLPEAPLKNIHLESVHI 398
Query: 170 LINPG 174
G
Sbjct: 399 TAKTG 403
>gi|392950252|ref|ZP_10315809.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434534|gb|EIW12501.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 438
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 27/197 (13%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V + +C ++ G D I +KSG D G+ +P + I ++ S G V GSE+
Sbjct: 210 SSSYVRVHNCELSCGDDCIVVKSGRDGDGLRVNQPAAHIEIDHCIIHSGYG--VTLGSEV 267
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS-- 118
S GIS+V + + ++ G +++ RGG IK +V E++N+ F N +
Sbjct: 268 SAGISDVHIHDMIFENTDCGFRMKSSADRGGVIKNVVAEHLEMHNVQFPFSWLMNWHTQY 327
Query: 119 -HPDDDFDPDALP-----------AIDQITFKDIIGTNITI-----------AGNFTGIQ 155
H PD P + + KDI+ ++T A +
Sbjct: 328 NHKTMAITPDMKPMWASVASQIPEKLQKTIVKDIVVRDVTATVSNDYAKETRAFDLKAFP 387
Query: 156 EAPFANICLSNISLLIN 172
E P NI + + N
Sbjct: 388 EKPMQNITFEDCHIKAN 404
>gi|116619801|ref|YP_821957.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222963|gb|ABJ81672.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 528
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV I DC I G D I +KSG D G RP ++ I + + G +V GSE+
Sbjct: 231 SSRNVRISDCYIDTGDDGIVIKSGKDADGRRVNRPAENISITNCNVHRAHG-AVVLGSEI 289
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG I N+ I + G+ +T +GRGG I+ + + + N+ P
Sbjct: 290 SGWIRNLVASNITCDGTQMGVRIKTRRGRGGGIEDVRFDNWTMQNVARGINISSFYVMAP 349
Query: 121 DDDFDPDALPAIDQIT-FKDIIGTNITIAG-----NFTGIQEAPFANICLSNI--SLLIN 172
++ P P ++ + +++I +++TI + GI E P + +S+I + I
Sbjct: 350 ENKSTPPEEPVSERTSIYRNIAISHMTINNSRLVIDIEGIPEMPIDGLRISDIVATAQIG 409
Query: 173 PGSYNS--WECSNIHGSSES 190
+YN+ E N+ S+++
Sbjct: 410 MKAYNTKAMELHNVQLSAKT 429
>gi|374311248|ref|YP_005057678.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753258|gb|AEU36648.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 461
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS + ++ I++ DA+ LK+G D G+ RPT DV ++ ++++ + + V FGSE
Sbjct: 233 SSKKILVQHADISVNDDALCLKAGRDSDGLRVNRPTEDVVLKDSVVRAGA-AGVTFGSET 291
Query: 61 SGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGN 115
SGG NV+ I + + GI F++ RGG+ + I I D +L ++ VA N
Sbjct: 292 SGGFRNVEAYGITVLKPVPVGILFKSAHTRGGWAEDIRIHDMDLKDVAVAIRVIMN 347
>gi|255532707|ref|YP_003093079.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255345691|gb|ACU05017.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 542
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 6/171 (3%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +NV I +C I++G D I++KSG D G P + I + S G V GSEM
Sbjct: 256 SCNNVHISNCHISVGDDCITIKSGKDAPGRKMAAPAQNYTITNCTMLSGHGG-VVIGSEM 314
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SG + + + + GI ++ +GRGG +++I + + + NI A +
Sbjct: 315 SGDVRKISISNCVFDGTDRGIRIKSARGRGGIVEEIRVDNIIMKNIKQQ--AIVLDLQYA 372
Query: 121 DDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+P + P I F +I G + A G++E P NI ++I++
Sbjct: 373 KTTLEPVSERTPRFRNIHFSNITG-QVNEAAYLNGLEEMPIENISFNDINM 422
>gi|160880868|ref|YP_001559836.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429534|gb|ABX43097.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 518
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 20/185 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I ++G D I++KSG G + RP+ ++ IR+ ++ GS + GSEM
Sbjct: 279 SCKNVLIVGVYFSLGDDCIAIKSGKIYMGAKHKRPSENLEIRQCCMRDGHGS-ITIGSEM 337
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI---NVAFGACGNCG 117
+GG+ N+ V + + G+ +T +GRG K +I NI +V NC
Sbjct: 338 AGGVKNLTVRECLFIHTDRGLRIKTRRGRG---KDAIIDGVLFENIRMDHVMTPVVINCF 394
Query: 118 SHPDDD--------FDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICL 164
D D +P D P I ++TF+++ TN A ++ G+ E I
Sbjct: 395 YFCDPDGHSEYVQSKNPYEVDDRTPHIGELTFRNLDCTNCHAAASYMYGLPEQKIEKITF 454
Query: 165 SNISL 169
N+++
Sbjct: 455 ENVNI 459
>gi|160880699|ref|YP_001559667.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429365|gb|ABX42928.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 474
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 10/165 (6%)
Query: 14 MGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIH 73
+G DAI +KSG + G PT V IR ++ G V GSEMS G+ +V +E
Sbjct: 266 VGDDAICIKSGKNAIGRKITVPTEHVRIRDCVVYHGHGGFV-IGSEMSRGVRDVVIENCL 324
Query: 74 LYDSLNGIEFRTTKGRGGYIKQIVI---------SDAELYNINVAFGACGNCGSHPDDDF 124
+ GI F++ GRGG ++ I I DA ++ + + S D
Sbjct: 325 FLGTDTGIRFKSAIGRGGVVEDITIRNIQMTDIEEDAIIFTMGYTLFRLDHQASDEPDTI 384
Query: 125 DPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ +P IT +D+ A G+++ P +I L N+ +
Sbjct: 385 SKEDIPEFKNITIRDVNCLRAGQAIKIDGLEQMPIHDIILENVMI 429
>gi|374309036|ref|YP_005055466.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358751046|gb|AEU34436.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 471
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 76/173 (43%), Gaps = 5/173 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V I+ C D ISLKSG E G RPT DV I + + GSE
Sbjct: 234 SCKHVVIDGCDFDTHDDCISLKSGRGEEGYTILRPTEDVQISNCTFMDHFWACIGIGSET 293
Query: 61 SGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
SGGI NV+V + I ++ GRG +I+ I ++D E+ F S
Sbjct: 294 SGGIRNVRVNHCKCLGARTFAIYIKSRPGRGAFIEDISMNDLEVSGAKQGFLRFNILDSG 353
Query: 120 PDDDFD---PDALPAIDQITFKDIIGTNITIAGNFTGIQEA-PFANICLSNIS 168
D+F + +P I F +I T++ + + GI + P L+N++
Sbjct: 354 KQDEFPVPGEEGIPTIRNFHFSNIRVTDMPVLVDGVGIHPSKPLEGFSLTNVT 406
>gi|116619802|ref|YP_821958.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222964|gb|ABJ81673.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 6/171 (3%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV I +C I G D I +K+G D G+ RPT +V I + + G +V GSE
Sbjct: 244 SSRNVRISNCYIDTGDDGIVIKAGKDSDGLRVNRPTENVSITNCSVHHAHG-AVTIGSET 302
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNC---G 117
SG + N+ I + G+ ++ +GRGG ++ + + + N+ A G
Sbjct: 303 SGWVRNLVASNITCDGTQMGVRIKSRRGRGGGVEDVRFDNWTMENVGTAVNITNYYLMEG 362
Query: 118 SHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
P +D +P + P I ++ + +A + G+ E +N+ +S+
Sbjct: 363 EKPANDPEPVSNRTPVFRNIAISNMTVNHARVAIDIEGLPEMNVSNLRISD 413
>gi|427384333|ref|ZP_18880838.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
gi|425727594|gb|EKU90453.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
Length = 506
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + +G D I LKSG DE G GR +V + + G V GSEM
Sbjct: 285 SCKNTLIVNSTFDVGDDGICLKSGKDEDGRIRGRVCENVVVDGCTVFKGHGGFVV-GSEM 343
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ NV V + G+ F++ +GRGG ++ I I + + +I N+ +G
Sbjct: 344 SGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISMIDIPTEPITFNLYYGGK 403
Query: 114 GNCGSHPDDDFDP---DALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
+ P + +P +D+ T F++I N+ AG F GI E P I
Sbjct: 404 SAVEVLESGEVVPAKVEPMP-VDETTPCFRNIHVENLVCAGARRALFFNGIPEMPIDGIT 462
Query: 164 LSNISL 169
L N+ +
Sbjct: 463 LKNVDI 468
>gi|225874241|ref|YP_002755700.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
gi|225791499|gb|ACO31589.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
Length = 428
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V IE + +G D I++KSG + P+T + IR + G SV GSE+
Sbjct: 219 SSSHVLIEHVVANVGDDDIAIKSG-EANSPGPDAPSTYITIRDCIFLHGHGLSV--GSEI 275
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH- 119
+GG ++ E I + + NGI + + RG + +V + ++ N+ A H
Sbjct: 276 AGGAQHILAENITMTGTDNGIRVKANRDRGNDVSDLVFKNIQMTNVKNAL-IISEFYPHI 334
Query: 120 ----PDDDFDPDAL-PAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
PD+ L P IT +++ TN AG G+ EAP ++ L N+S+
Sbjct: 335 YPPMPDNPAPITRLTPHFHNITVENVTATNSKNAGAIAGLPEAPIRDVVLKNVSI 389
>gi|261406869|ref|YP_003243110.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283332|gb|ACX65303.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 475
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 8/193 (4%)
Query: 7 IEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISN 66
I D + +G DAI +KSG D G A PT V IR + G V GSEMSG + N
Sbjct: 269 IYDSVFDVGDDAICIKSGKDADGRALAVPTEYVTIRNCQVFHGHGGFV-IGSEMSGDVRN 327
Query: 67 VQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHPDDDFDP 126
+ + + G+ F++T+GRGG +++I I + I + S ++ DP
Sbjct: 328 IAITDCVFIGTDAGLRFKSTRGRGGTVERIYIRGVLMKEIAKEAIIFSSYYSGKNNTDDP 387
Query: 127 DALPAIDQITFKDIIGTNITIAGNFT-----GIQEAPFANICLSNISLLINPGSYNSWEC 181
A+ + F+D ++ T G T G+ E P NI + L G+ +
Sbjct: 388 VAVTE-ETPVFRDFHISDTTCIGAHTALHIKGLPEMPIENIVFDRVQLTARNGATCT-NA 445
Query: 182 SNIHGSSESVFPE 194
NI V PE
Sbjct: 446 RNITFRQTKVLPE 458
>gi|345513259|ref|ZP_08792781.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|229437122|gb|EEO47199.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 919
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/175 (30%), Positives = 74/175 (42%), Gaps = 11/175 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE C + G D +LK+G E G+ G+PT +V IR L Q G + GSE
Sbjct: 656 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLAQHGHG-GITCGSET 714
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF-----GACGN 115
+G I N+ V + GI F+T + RGG + N+ AF G+
Sbjct: 715 AGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYY 774
Query: 116 CGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
G +P + P + I KD I + GI E PF + + N
Sbjct: 775 MGELAARYPARKVN-RLTPNVKNILIKDFIVESADQFFTANGIPEIPFNQVVIEN 828
>gi|423232692|ref|ZP_17219092.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|423247384|ref|ZP_17228434.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
gi|392623131|gb|EIY17236.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|392632524|gb|EIY26483.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
Length = 919
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/175 (30%), Positives = 74/175 (42%), Gaps = 11/175 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE C + G D +LK+G E G+ G+PT +V IR L Q G + GSE
Sbjct: 656 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHGHG-GITCGSET 714
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF-----GACGN 115
+G I N+ V + GI F+T + RGG + N+ AF G+
Sbjct: 715 AGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYY 774
Query: 116 CGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
G +P + P + I KD I + GI E PF + + N
Sbjct: 775 MGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVIEN 828
>gi|329956871|ref|ZP_08297439.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523628|gb|EGF50720.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 522
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 10/176 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV + + + G DAI +KSG + G G P +V ++ + G V GSEM
Sbjct: 293 SCKNVVVTNSLFDAGDDAICIKSGKNADGRRRGEPCENVLVKNNTVLHGHGGFVV-GSEM 351
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ NV V + G+ F++T+GRGG ++ + + + + IN+ A +
Sbjct: 352 SGGVRNVYVADCTFIGTDVGLRFKSTRGRGGVVENVYVDNINM--INIPGDALIADLYYA 409
Query: 121 DDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICLSNISL 169
D +PA+ + T FK+I +NI+ G G+ E P N + N+ +
Sbjct: 410 VKDAPGAPVPAVTEETPSFKNIHISNISCKGAGRAMFLNGLPEMPIENFSVRNMRI 465
>gi|365122251|ref|ZP_09339156.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642965|gb|EHL82299.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
Length = 561
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 17/191 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N + +C +G D I +KSG D G G P +V + ++ G V GSEM
Sbjct: 291 SCKNTIVTNCSFDVGDDGICIKSGKDADGRKRGIPCENVIVDNCVVYHGHGGFVV-GSEM 349
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVI---------SDAELYNINVAFG 111
SGG+ N+ V + G+ F++T+GRGG ++ I I +DA L+++
Sbjct: 350 SGGVKNISVSNCQFLGTDVGLRFKSTRGRGGVVENIFIKNIDMINIPTDALLFDLYYGGK 409
Query: 112 ACGNCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANICL 164
+ + D+ + +PA+ + T F++I + + G F G+ E N+ +
Sbjct: 410 SASEVLADGDEVKEESNIPAVTEETPAFRNITISRVNCQGARRAMYFNGLPEMNVQNVTV 469
Query: 165 SNISLLINPGS 175
S+ ++ G+
Sbjct: 470 SDCNITAQLGA 480
>gi|212693801|ref|ZP_03301929.1| hypothetical protein BACDOR_03322 [Bacteroides dorei DSM 17855]
gi|212663690|gb|EEB24264.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 919
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/175 (30%), Positives = 74/175 (42%), Gaps = 11/175 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE C + G D +LK+G E G+ G+PT +V IR L Q G + GSE
Sbjct: 656 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLAQHGHG-GITCGSET 714
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF-----GACGN 115
+G I N+ V + GI F+T + RGG + N+ AF G+
Sbjct: 715 AGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYY 774
Query: 116 CGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
G +P + P + I KD I + GI E PF + + N
Sbjct: 775 MGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVIEN 828
>gi|371776320|ref|ZP_09482642.1| glycoside hydrolase family protein [Anaerophaga sp. HS1]
Length = 463
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 7/173 (4%)
Query: 3 DNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSG 62
+NV IEDC+ G DAI++KSG ++ P+ ++ +R L+++ +A GSE+SG
Sbjct: 272 ENVLIEDCVFDQGDDAIAIKSGRNQDAWRLNTPSRNIVVRNCLVKNGH-QLLAIGSELSG 330
Query: 63 GISNVQVEKIHLYDS---LNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
G+ NV +E + ++ + + +T + RGGY+K + + + ++ +
Sbjct: 331 GVENVFLENCTVEENARMFHLVFIKTNERRGGYVKNVYVRNVTADKMSQGILGIDTDVLY 390
Query: 120 PDDDFDP---DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
D P L I + DI + P NI L NI +
Sbjct: 391 QWRDLVPTYEKRLTPISDVYLTDIKANKVNFLSRILAQDALPVKNIRLKNIRV 443
>gi|423242175|ref|ZP_17223285.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
gi|392639919|gb|EIY33727.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
Length = 919
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/175 (30%), Positives = 74/175 (42%), Gaps = 11/175 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE C + G D +LK+G E G+ G+PT +V IR L Q G + GSE
Sbjct: 656 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLAQHGHG-GITCGSET 714
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF-----GACGN 115
+G I N+ V + GI F+T + RGG + N+ AF G+
Sbjct: 715 AGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYY 774
Query: 116 CGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
G +P + P + I KD I + GI E PF + + N
Sbjct: 775 MGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVIEN 828
>gi|154502614|ref|ZP_02039674.1| hypothetical protein RUMGNA_00427 [Ruminococcus gnavus ATCC 29149]
gi|153796806|gb|EDN79226.1| polygalacturonase (pectinase) [Ruminococcus gnavus ATCC 29149]
Length = 532
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 17/185 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S D+V I C+ ++G D I++K+G G Y P++++ IR+ ++ G S+ GSEM
Sbjct: 288 SCDDVEITGCLFSVGDDCIAVKAGKISVGAKYKVPSSNIRIRQCCMRDGHG-SITLGSEM 346
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAEL---------YNINVA 109
+ GI N+Q + ++ G+ +T +GRG I I+ D + + IN
Sbjct: 347 AAGIKNLQARQCVFLNTDRGLRIKTRRGRGKDAVIDGILFEDIRMDSVLTLLTPFVINSF 406
Query: 110 FGACGNCGSHPDDDFDPDAL----PAIDQITFKDIIGTNITIAGN-FTGIQEAPFANICL 164
+ + S +P A+ P I ++ F++I N +A F G+ E + +
Sbjct: 407 YFCDPDGHSEYVQCKEPLAVDERTPQIKELCFRNIQAKNCHVAAAFFYGLPEQKIERVEM 466
Query: 165 SNISL 169
+I +
Sbjct: 467 KHIQV 471
>gi|224536236|ref|ZP_03676775.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522122|gb|EEF91227.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
Length = 456
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 19/182 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IE+ +G D I++KSG D+ G G+ T +V IR + ++ GSEM
Sbjct: 259 SSTNVLIENMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHF---ARWAITIGSEM 315
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQI----VISDAELYN-INVAFGACG- 114
SGG+ N+ +E + NGI F++ RGGY + + + +D L+ IN G
Sbjct: 316 SGGVRNIFIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEADVCLWGVINFRTNYHGY 375
Query: 115 NCGSHPDDDFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISLLINP 173
G+HP I +D+ + ++A G+ EA NI L NI + P
Sbjct: 376 RGGNHP---------TLFRNICIEDVTCNRVDSVALMANGLPEAKLYNITLRNIKVKQAP 426
Query: 174 GS 175
+
Sbjct: 427 KA 428
>gi|383752964|ref|YP_005431867.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365016|dbj|BAL81844.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 494
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 13/177 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IEDC G D I++KSG +E G G PT +V IR + G + GSE+
Sbjct: 282 SSRNVLIEDCYFLTGDDCIAIKSGRNEDGRRIGVPTANVIIRHNRFANGHG-GITLGSEI 340
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG 117
SGG+ +V H +DS N I F+T RGG ++ + + D+ +N A A +
Sbjct: 341 SGGVHDVFATGNH-FDSPNLDYPIRFKTNAMRGGTLENVYVKDSV---VNKARLAVVHAD 396
Query: 118 SHPDDDFDPDALPAIDQIT---FKDIIGTNITIAGNF--TGIQEAPFANICLSNISL 169
++ + LP +D IT F G +I F G +A N+ ++ L
Sbjct: 397 FFYEEGHAGENLPQLDNITLDGFWTAEGGSIDAKYAFYLKGFADALIENVTFRDMKL 453
>gi|339022449|ref|ZP_08646391.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
gi|338750533|dbj|GAA09695.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
Length = 438
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 23/213 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSD+V + IA G D I++KSG + G R +D+ I + G ++ GSE+
Sbjct: 214 SSDHVTMSTLDIATGDDNIAIKSGLRQPG----RAVSDISITQSRF--GEGHGLSIGSEL 267
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
+ G ++++ + ++L+G+ ++ + RGG I I + ++ P
Sbjct: 268 ANGAHHIRISDVSFQNTLSGLRIKSGRDRGGDIGWISAEHVMMNHVRAPLSISDYYAGQP 327
Query: 121 DDD------FDPDA-----LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
DP A P I +T D+ N AG G+ EAP + L NI L
Sbjct: 328 GGTQKTVSMTDPAAPVTSTTPHIHDVTITDLTAKNAETAGVVLGLPEAPIEGLTLRNIRL 387
Query: 170 LINPGSYNSWECSNIHG-SSESVFP-EPCPELE 200
G + S++ G +SES F + P L+
Sbjct: 388 SARKG----LQFSHVSGRASESTFAVQTAPVLQ 416
>gi|423315483|ref|ZP_17293411.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
gi|392679286|gb|EIY72672.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
Length = 1095
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 75/163 (46%), Gaps = 5/163 (3%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS+++ I I D IS+KSG DE G GRP+ ++ I G VA GSE+
Sbjct: 888 SSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAYGHG-GVAMGSEI 946
Query: 61 SGGISNVQVEKIHLYDSLNG--IEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS 118
SGGI NV + L D+ N + F++ RGG ++ I D + F
Sbjct: 947 SGGIRNVTIRSC-LMDNENWSPLRFKSQPSRGGTVENITFEDITIKGARSIFDINMEWRM 1005
Query: 119 HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFAN 161
P L ++ I FK+I G + AG G +EAPF N
Sbjct: 1006 VPPLSPAHYPLTSLRNIHFKNINGEAQS-AGTMYGFKEAPFGN 1047
>gi|325106419|ref|YP_004276073.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975267|gb|ADY54251.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 554
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 86/191 (45%), Gaps = 17/191 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV + + +G D I LKSG +E G G P +V + + G V GSEM
Sbjct: 282 SCKNVIVVNSSFDVGDDGICLKSGKNEDGRKRGMPCENVIVDNCTVFKGHGGFVV-GSEM 340
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ N+ V + G+ F++ +GRGG ++ I IS+ + +I N+ +G
Sbjct: 341 SGGVRNISVTNCQFLGTDVGLRFKSNRGRGGVVENIFISNISMIDIATEPLHFNLYYGGK 400
Query: 114 GNCGSHPDDD--FDPDALPAIDQI--TFKDIIGTNI-----TIAGNFTGIQEAPFANICL 164
D + LP +D+ TFK+I N+ A F G+ E N+ +
Sbjct: 401 SAVEELEDGTKIVRQEKLPPVDETTPTFKNITIKNVYCSEANKAMYFYGLPEHNIKNLQI 460
Query: 165 SNISLLINPGS 175
N + N G+
Sbjct: 461 ENFVVHSNQGA 471
>gi|423226065|ref|ZP_17212531.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392630583|gb|EIY24571.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 466
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 19/182 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IE+ +G D I++KSG D+ G G+ T +V IR + ++ GSEM
Sbjct: 269 SSTNVLIENMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHF---ARWAITIGSEM 325
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQI----VISDAELYN-INVAFGACG- 114
SGG+ N+ +E + NGI F++ RGGY + + + +D L+ IN G
Sbjct: 326 SGGVRNIFIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEADVCLWGVINFRTNYHGY 385
Query: 115 NCGSHPDDDFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISLLINP 173
G+HP I +D+ + ++A G+ EA NI L NI + P
Sbjct: 386 RGGNHP---------TLFRNICIEDVTCNRVDSVALMANGLPEAKLYNITLRNIKVKQAP 436
Query: 174 GS 175
+
Sbjct: 437 KA 438
>gi|412993465|emb|CCO13976.1| predicted protein [Bathycoccus prasinos]
Length = 635
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 19/193 (9%)
Query: 1 SSDNVCIEDCIIAMG--HDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGS 58
S+ N + D I G DA+++KSG D +G P+ ++ + V + G +++ GS
Sbjct: 393 STSNSFLRDSFITTGDKEDAVAIKSGKDYHGRKANVPSKNIRVEHVTILG--GHALSVGS 450
Query: 59 EMSGGISNVQVEKIHLYDSLNG------IEFRTTKGRGGYIKQIVISDAELYNINVAFGA 112
EMSGG+SN+ I +D N +T +GRGG + QI + +N A
Sbjct: 451 EMSGGVSNIIFSDI-TFDGRNNKFGVGSARVKTMRGRGGVVDQITFQNIRGWNALYAL-E 508
Query: 113 CGNCGSHPDDDFDP---DALPAIDQITFKDIIGTNIT-IAGNFTGIQEAPFANICLSNIS 168
S D + P + P + I FK++ I AG G+ E +N+ + N+
Sbjct: 509 LYEYYSKQDTNVGPVSREETPIVKNINFKNVHIEGIKRYAGVIAGLPEMAVSNLVIENVH 568
Query: 169 LLINPGSYNSWEC 181
L + W C
Sbjct: 569 LT---NVHKGWNC 578
>gi|260642009|ref|ZP_05414289.2| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623835|gb|EEX46706.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 546
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + + G DAI +KS DE G G P +V ++ + G V GSEM
Sbjct: 296 SCKNALIINSVFDAGDDAICIKSDKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVV-GSEM 354
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ VE + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 355 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPLLFDLFYGGK 414
Query: 114 GNCGSHPDDDF---DPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G G ++D A+P + + T F++I +NI G+ F G+ E P +N+
Sbjct: 415 G-AGEESEEDLLNRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLPEMPISNVT 473
Query: 164 LSNISL 169
+ ++ +
Sbjct: 474 VKDVVM 479
>gi|266623864|ref|ZP_06116799.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
gi|288864322|gb|EFC96620.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
Length = 438
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 29/196 (14%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V +E+C+ D+I +KSG D GI RP D+ ++ +++ G V GSE+
Sbjct: 208 SCHDVLVENCVTDCNDDSICIKSGRDADGIRVNRPCHDITVQNCEIRAGFG--VTIGSEV 265
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI----------NVAF 110
SGG+ + ++ + + + G +++ R GYI+ + + + N+ N A+
Sbjct: 266 SGGVYQITLKNLRYHGTDCGFRIKSSVARHGYIRDVRVEGLSMVNVKYPFHFFLNWNPAY 325
Query: 111 GAC-------GNCGSHPDDDFD--PDALP--AIDQITFKDIIGTN------ITIAGNFTG 153
C G H + PD++P + IT +++ N I+ A + G
Sbjct: 326 SYCELPGDYEGEIPEHWKKLLEAIPDSVPKTKVSNITIENVTARNEADYNGISRAFHIEG 385
Query: 154 IQEAPFANICLSNISL 169
++ P ++ N+SL
Sbjct: 386 FEDQPVEHVIFKNVSL 401
>gi|374311245|ref|YP_005057675.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753255|gb|AEU36645.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 467
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 6/145 (4%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V I+ C IA G D ISLKSG E RPT DV I L+ + + G+E
Sbjct: 230 SCRHVLIDSCDIASGDDCISLKSGRGEEAYTMNRPTEDVRITNCTLEGRGFACLGIGTES 289
Query: 61 SGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
S GI NV +E H+ I ++ GRG +I+ + + D + + + F +
Sbjct: 290 SAGIRNVIIEHCHITSVYKYAIYIKSRIGRGAFIENLTVRDMDAARMRMGFLRIDQTNAG 349
Query: 120 PDDDFDP----DALPAIDQITFKDI 140
D DP + LP F++I
Sbjct: 350 I-QDADPVPGLEGLPLFRNFRFENI 373
>gi|291514459|emb|CBK63669.1| Endopolygalacturonase [Alistipes shahii WAL 8301]
Length = 555
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 102/229 (44%), Gaps = 20/229 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV + + +G D I +KSG D+ G G P ++ + ++ G V GSEM
Sbjct: 284 SCRNVVLTNSRFDVGDDGICIKSGKDKAGRDRGIPCENILVDNCIVFHGHGGFVV-GSEM 342
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ NV+V + G+ F++ +GRGG ++ I I D + NI ++ +G
Sbjct: 343 SGGVRNVRVSNCTFSGTDVGLRFKSARGRGGVVENIWIEDIAMNNILQEPLLFDLFYGGK 402
Query: 114 GNCGSHP---DDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
+H D + A +D+ T F+DI N+ G F G+ E +
Sbjct: 403 SASEAHAEGGDAEVTDIAPKPVDETTPAFRDIHIRNVWCRGARRAMYFNGLPEMNVERVT 462
Query: 164 LSNISLLINPGSYNSWECSNIHGSSESVFPEPCPELE-NSSSNSSSTCF 211
+ N + G+ + E S++ + PE P L N+ N S+ F
Sbjct: 463 VENTQIYAVTGAQIN-ESSDVVLRGVKIIPEQGPALMLNNVKNLSAEGF 510
>gi|371778396|ref|ZP_09484718.1| glycoside hydrolase [Anaerophaga sp. HS1]
Length = 572
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 86/186 (46%), Gaps = 18/186 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I + +G DAI KSG DE G PT +V ++ ++ G V GSEM
Sbjct: 298 SCKNVVIYNNSFDVGDDAICFKSGKDEDGRKRAVPTENVVVKNNVVYHGHGGFV-IGSEM 356
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ NV V + G+ F++T+GRGG ++ I IS+ ++ +I N+ +G
Sbjct: 357 SGGVRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIYISNIDMIDIPTEPIRFNLFYGGK 416
Query: 114 GNC-----GSHPD-DDFDP----DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 163
S PD + +P + PA I K+I A F G+ E N+
Sbjct: 417 SPVLDDGGNSVPDIQENEPAPVTEETPAFRNIFMKNIRANGFGNAAFFMGLPEMNLQNVH 476
Query: 164 LSNISL 169
L N L
Sbjct: 477 LENALL 482
>gi|69249564|ref|ZP_00605017.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|389869657|ref|YP_006377080.1| glycosyl hydrolase [Enterococcus faecium DO]
gi|68194111|gb|EAN08650.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|388534906|gb|AFK60098.1| glycosyl hydrolase [Enterococcus faecium DO]
Length = 317
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV + +C +A G D I++KSG D G R ++ + + R ++S G V GSE+
Sbjct: 208 SSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEV 265
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S G+S+V + I + S GI +++K RGG I+ I + + + +++ F
Sbjct: 266 SAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVHFLF 315
>gi|427387343|ref|ZP_18883399.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
gi|425725504|gb|EKU88375.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
Length = 923
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IE C + D +LKSG E G+ GRPT +V IR L + G + GSE
Sbjct: 261 SSKNVLIEYCTLNTHDDCFTLKSGRGEEGVHIGRPTANVVIRHSLATNGPG-GITCGSET 319
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
+G I N+ ++ GI F+T + RGG + ++ + ++ AF
Sbjct: 320 AGNIKNIYAHDCVFKGTMTGILFKTRRPRGGGTENVLYERIRMIDVKDAF 369
>gi|329957312|ref|ZP_08297832.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523025|gb|EGF50128.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 452
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 87/189 (46%), Gaps = 23/189 (12%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IE +G D I++KSG D+ G G+ T +V IR + ++ GSEM
Sbjct: 259 SSTNVLIEGMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHF---ARWAITIGSEM 315
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQI----VISDAELYN-INVAFGACG- 114
SGG+ N+ +E + NGI F++ RGGY + + + +D L+ IN G
Sbjct: 316 SGGVRNIYIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEADVCLWGVINFRTNYHGY 375
Query: 115 NCGSHPD------------DDFDPDALPA--IDQITFKDIIGTNITIAGNFTGIQEAPFA 160
G+HP + D AL A + + DI NIT+ IQ
Sbjct: 376 RGGNHPTLFRNICIEDVTCNRVDSVALMANGLPEAKLYDITLRNITVKKAPKAIQMENVV 435
Query: 161 NICLSNISL 169
N+ L N+++
Sbjct: 436 NLTLDNVTV 444
>gi|265755004|ref|ZP_06089918.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263234615|gb|EEZ20194.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 497
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 74/175 (42%), Gaps = 11/175 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE C + G D +LK+G E G+ G+PT +V IR L Q G + GSE
Sbjct: 234 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLAQHGHG-GITCGSET 292
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF-----GACGN 115
+G I N+ V + GI F+T + RGG + N+ AF G+
Sbjct: 293 AGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYY 352
Query: 116 CGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
G +P + P + I KD I + GI E PF + + N
Sbjct: 353 MGELAARYPARKVN-RLTPNVKNILIKDFIVESADQFFTANGIPEIPFNQVVIEN 406
>gi|150004323|ref|YP_001299067.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149932747|gb|ABR39445.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 594
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 74/175 (42%), Gaps = 11/175 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE C + G D +LK+G E G+ G+PT +V IR L Q G + GSE
Sbjct: 331 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHGHG-GITCGSET 389
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF-----GACGN 115
+G I N+ V + GI F+T + RGG + N+ AF G+
Sbjct: 390 AGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYY 449
Query: 116 CGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
G +P + P + I KD I + GI E PF + + N
Sbjct: 450 MGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVVEN 503
>gi|322434842|ref|YP_004217054.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321162569|gb|ADW68274.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 478
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS ++ + IA+ DA+ LK+G D G+ RPT DV +R ++ + + V FGSE
Sbjct: 226 SSKHIVVAHADIAVNDDALCLKAGRDSDGLRVNRPTEDVVLRDSTIRDGA-AGVTFGSET 284
Query: 61 SGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGN 115
SGG N++ + ++ + GI F++ RGG+ + + I D L +I V N
Sbjct: 285 SGGFRNIEAYNLKVFGHVPVGILFKSAHTRGGFAENVRIHDLTLTDIPVVLKVTMN 340
>gi|257900361|ref|ZP_05680014.1| glycoside hydrolase [Enterococcus faecium Com15]
gi|257838273|gb|EEV63347.1| glycoside hydrolase [Enterococcus faecium Com15]
Length = 412
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V I +C +A G D I++KSG D G R ++ + I R ++S G V GSE+
Sbjct: 184 SSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGYG--VTIGSEV 241
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S GIS+V + I + S GI ++++ RGG I+ I + + + ++ F
Sbjct: 242 SAGISDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPF 291
>gi|430837659|ref|ZP_19455621.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430840340|ref|ZP_19458267.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430859280|ref|ZP_19476893.1| glycosyl hydrolase [Enterococcus faecium E1552]
gi|430487173|gb|ELA63943.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430489826|gb|ELA66401.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430544024|gb|ELA84074.1| glycosyl hydrolase [Enterococcus faecium E1552]
Length = 436
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S NV + +C +A G D I++KSG D G R ++ + + R ++S G V GSE+S
Sbjct: 209 STNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEVS 266
Query: 62 GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
G+S+V + I + S GI +++K RGG I+ I + + + ++ F
Sbjct: 267 AGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPF 315
>gi|150002783|ref|YP_001297527.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|294777287|ref|ZP_06742742.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149931207|gb|ABR37905.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|294448907|gb|EFG17452.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 1095
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 74/163 (45%), Gaps = 5/163 (3%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS+++ I I D IS+KSG DE G GRP+ ++ I G VA GSE+
Sbjct: 888 SSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAYGHG-GVAMGSEI 946
Query: 61 SGGISNVQVEKIHLYDSLNG--IEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS 118
SGGI NV + L D+ N + F++ RGG ++ I D + F
Sbjct: 947 SGGIRNVTIRSC-LMDNENWSPLRFKSQPSRGGTVENITFEDITIKGARSIFDINMEWRM 1005
Query: 119 HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFAN 161
P L + I FK+I G + AG G +EAPF N
Sbjct: 1006 VPPLSPAHYPLTCLRNIHFKNINGEAQS-AGTMYGFKEAPFGN 1047
>gi|423312679|ref|ZP_17290616.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
gi|392687413|gb|EIY80706.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
Length = 594
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 74/175 (42%), Gaps = 11/175 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE C + G D +LK+G E G+ G+PT +V IR L Q G + GSE
Sbjct: 331 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHGHG-GITCGSET 389
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF-----GACGN 115
+G I N+ V + GI F+T + RGG + N+ AF G+
Sbjct: 390 AGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYY 449
Query: 116 CGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
G +P + P + I KD I + GI E PF + + N
Sbjct: 450 MGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVVEN 503
>gi|408672530|ref|YP_006872278.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
gi|387854154|gb|AFK02251.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
Length = 789
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 57/189 (30%), Positives = 82/189 (43%), Gaps = 16/189 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N +E C + G D I++KSG DE G G PT + I+ ++ + G V GSEM
Sbjct: 517 SCRNGVLEGCTFSTGDDGITIKSGRDEQGRKRGVPTENFVIKDCIVYHAHGGFV-IGSEM 575
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI---NVAFGACGNCG 117
SGG+ N+ + S G+ F+T +GRGG + I +++ + +I V F
Sbjct: 576 SGGVRNMFISDCTFMGSDVGLRFKTARGRGGVVNNIYVNNINMTDIPGEAVLFDMYYAAK 635
Query: 118 SHPDDDFDPDALPAID-------QITFKDIIGTNITIAGNFT-----GIQEAPFANICLS 165
D + LP I FKD NI G T G+ E NI +
Sbjct: 636 DPVRADGKENELPVIKAEPLGEGTPQFKDFYIQNIVCKGAETAILIRGLPEMTIKNINIE 695
Query: 166 NISLLINPG 174
N + N G
Sbjct: 696 NAMIEANKG 704
>gi|393781893|ref|ZP_10370086.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
gi|392674779|gb|EIY68222.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
Length = 509
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 17/185 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + +G D I LKSG DE G R +V + + G V GSEM
Sbjct: 284 SCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARSCENVVVDGCTVFKGHGGFVV-GSEM 342
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ NV V + G+ F++ +GRGG ++ I + + + +I N+ +G
Sbjct: 343 SGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWVRNVSMMDIPTEPVTFNLYYGGK 402
Query: 114 G-----NCGSHPDDDFDP----DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICL 164
G DP + P I +++ +N A F GI E P I L
Sbjct: 403 SAVEVLESGEKVPLKVDPLPVDETTPCFRNIHISNLVCSNARRALFFNGIPEMPIDGITL 462
Query: 165 SNISL 169
N+ +
Sbjct: 463 ENLDI 467
>gi|237709329|ref|ZP_04539810.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229456714|gb|EEO62435.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 529
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 74/175 (42%), Gaps = 11/175 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE C + G D +LK+G E G+ G+PT +V IR L Q G + GSE
Sbjct: 266 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLAQHGHG-GITCGSET 324
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF-----GACGN 115
+G I N+ V + GI F+T + RGG + N+ AF G+
Sbjct: 325 AGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYY 384
Query: 116 CGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
G +P + P + I KD I + GI E PF + + N
Sbjct: 385 MGELAARYPARKVN-RLTPNVKNILIKDFIVESADQFFTANGIPEIPFNQVVIEN 438
>gi|23099543|ref|NP_693009.1| hypothetical protein OB2088 [Oceanobacillus iheyensis HTE831]
gi|22777773|dbj|BAC14044.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 495
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 14/186 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV + +C +G D ++ KSG +E G RPT +V + +++ G + GSE
Sbjct: 219 SCSNVRVSNCHFDVGDDCLAFKSGINEDGRRVARPTENVAVTNCTMKNGHGG-IVMGSEN 277
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI--NVAFGACGNCGS 118
SGGI N+ V + GI +T + RG YI+ I+I + + + +A + G
Sbjct: 278 SGGIRNIAVSNCVFIGTDRGIRLKTNRARGSYIRDILIDNIYMDGVLCPLAINSFYRHGL 337
Query: 119 HPDD----DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSN--I 167
D + P + P I+ I ++ N A F G+ E +I L + I
Sbjct: 338 DKSDSLINELSPIEISEKTPEIEYIHISNVTARNCRSAAGFIYGLPEKYVKDIILRHVLI 397
Query: 168 SLLINP 173
+ INP
Sbjct: 398 EMTINP 403
>gi|425055006|ref|ZP_18458501.1| polygalacturonase [Enterococcus faecium 505]
gi|403034856|gb|EJY46278.1| polygalacturonase [Enterococcus faecium 505]
Length = 436
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V I +C +A G D I++KSG D G R ++ + I R ++S G V GSE+
Sbjct: 208 SSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGYG--VTIGSEV 265
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S G+S+V + I+ + S GI ++++ RGG I+ I + + + ++ F
Sbjct: 266 SAGVSDVYIHDINFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPF 315
>gi|293379024|ref|ZP_06625177.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|292642303|gb|EFF60460.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
Length = 436
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V I +C +A G D I++KSG D G R ++ + I R ++S G V GSE+
Sbjct: 208 SSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGYG--VTIGSEV 265
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S G+S+V + I + S GI ++++ RGG I+ I + + + ++ F
Sbjct: 266 SAGVSDVYIHDIDFFQSDCGIRMKSSRKRGGVIENIRVENLNMMDVQFPF 315
>gi|293571115|ref|ZP_06682155.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430842918|ref|ZP_19460825.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|431064175|ref|ZP_19493522.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|431130293|ref|ZP_19498935.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|431739352|ref|ZP_19528287.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|431742389|ref|ZP_19531282.1| glycosyl hydrolase [Enterococcus faecium E2039]
gi|291608845|gb|EFF38127.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430492629|gb|ELA68993.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|430566194|gb|ELB05313.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|430568816|gb|ELB07846.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|430596080|gb|ELB33937.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|430600147|gb|ELB37805.1| glycosyl hydrolase [Enterococcus faecium E2039]
Length = 443
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V I +C +A G D I++KSG D G R ++ + I R ++S G V GSE+
Sbjct: 215 SSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGYG--VTIGSEV 272
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S GIS+V + I + S GI ++++ RGG I+ I + + + ++ F
Sbjct: 273 SAGISDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPF 322
>gi|294776865|ref|ZP_06742328.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449341|gb|EFG17878.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 594
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 74/175 (42%), Gaps = 11/175 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE C + G D +LK+G E G+ G+PT +V IR L Q G + GSE
Sbjct: 331 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHGHG-GITCGSET 389
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF-----GACGN 115
+G I N+ V + GI F+T + RGG + N+ AF G+
Sbjct: 390 AGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYY 449
Query: 116 CGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
G +P + P + I KD I + GI E PF + + N
Sbjct: 450 MGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVVEN 503
>gi|345519938|ref|ZP_08799345.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254836194|gb|EET16503.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
Length = 594
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 74/175 (42%), Gaps = 11/175 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE C + G D +LK+G E G+ G+PT +V IR L Q G + GSE
Sbjct: 331 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHGHG-GITCGSET 389
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF-----GACGN 115
+G I N+ V + GI F+T + RGG + N+ AF G+
Sbjct: 390 AGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYY 449
Query: 116 CGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
G +P + P + I KD I + GI E PF + + N
Sbjct: 450 MGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVVEN 503
>gi|442804291|ref|YP_007372440.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740141|gb|AGC67830.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 455
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IE+C I D I +K+G D G+ RP+ ++ +R + SG+ V GSE
Sbjct: 207 SSRNVLIENCNIECNDDNICIKAGRDADGLRVNRPSENIVVRNCSI--GSGAGVTIGSET 264
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
SG I NV++ +I + G ++ RGG I+ I + D E+ N+ F
Sbjct: 265 SGSIRNVEIYQIKANGTDGGFRIKSALTRGGVIENIRVHDFEMVNVLRPF 314
>gi|319644257|ref|ZP_07998770.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|317384248|gb|EFV65220.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 580
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 74/175 (42%), Gaps = 11/175 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE C + G D +LK+G E G+ G+PT +V IR L Q G + GSE
Sbjct: 317 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHGHG-GITCGSET 375
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF-----GACGN 115
+G I N+ V + GI F+T + RGG + N+ AF G+
Sbjct: 376 AGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYY 435
Query: 116 CGS----HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
G +P + P + I KD I + GI E PF + + N
Sbjct: 436 MGELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVVEN 489
>gi|424764550|ref|ZP_18191970.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431050708|ref|ZP_19493377.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|431764023|ref|ZP_19552569.1| glycosyl hydrolase [Enterococcus faecium E3548]
gi|402419033|gb|EJV51317.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430560246|gb|ELA99550.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|430621327|gb|ELB58094.1| glycosyl hydrolase [Enterococcus faecium E3548]
Length = 436
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V I +C +A G D I++KSG D G R ++ + I R ++S G V GSE+
Sbjct: 208 SSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGYG--VTIGSEV 265
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S G+S+V + I + S GI ++++ RGG I+ I + + + ++ F
Sbjct: 266 SAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPF 315
>gi|431753628|ref|ZP_19542297.1| glycosyl hydrolase [Enterococcus faecium E2620]
gi|430611661|gb|ELB48738.1| glycosyl hydrolase [Enterococcus faecium E2620]
Length = 436
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V I +C +A G D I++KSG D G R ++ + I R ++S G V GSE+
Sbjct: 208 SSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGYG--VTIGSEV 265
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S G+S+V + I + S GI ++++ RGG I+ I + + + ++ F
Sbjct: 266 SAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPF 315
>gi|227550317|ref|ZP_03980366.1| pectin lyase [Enterococcus faecium TX1330]
gi|227180577|gb|EEI61549.1| pectin lyase [Enterococcus faecium TX1330]
Length = 436
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V I +C +A G D I++KSG D G R ++ + I R ++S G V GSE+
Sbjct: 208 SSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGYG--VTIGSEV 265
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S G+S+V + I + S GI ++++ RGG I+ I + + + ++ F
Sbjct: 266 SAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPF 315
>gi|257897638|ref|ZP_05677291.1| glycoside hydrolase [Enterococcus faecium Com12]
gi|257834203|gb|EEV60624.1| glycoside hydrolase [Enterococcus faecium Com12]
Length = 412
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V I +C +A G D I++KSG D G R ++ + I R ++S G V GSE+
Sbjct: 184 SSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGYG--VTIGSEV 241
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S G+S+V + I + S GI ++++ RGG I+ I + + + ++ F
Sbjct: 242 SAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPF 291
>gi|420246079|ref|ZP_14749578.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
gi|398043755|gb|EJL36633.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
Length = 441
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 6/158 (3%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS ++ + I++G D I+LK+G RPT V I L++ G+ V GSEM
Sbjct: 278 SSSDIRLVGLHISVGDDCIALKAGKRSPLGGPDRPTEHVRIENCLMERGHGA-VVIGSEM 336
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN--VAFGACGNCGS 118
S GIS++ + H + G+ +T +GRGG + I +SD+ + ++ VA + C +
Sbjct: 337 SAGISDIAIRNCHFKGTDRGLRIKTRRGRGGLVADIRLSDSLMEDVATPVAVNSFYFCDA 396
Query: 119 HPDDDFDPDALP---AIDQITFKDIIGTNITIAGNFTG 153
++ P +++ + + I N+T++G T
Sbjct: 397 DGQSNYVQSRSPLPVSVETPSIRSITVENVTVSGARTA 434
>gi|255622277|ref|XP_002540267.1| hypothetical protein RCOM_1982630 [Ricinus communis]
gi|223497416|gb|EEF22116.1| hypothetical protein RCOM_1982630 [Ricinus communis]
Length = 197
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 9/113 (7%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S NV IEDC+ G DAIS+KSG D+ G P+ ++ +R +++ +A GSE+S
Sbjct: 2 SQNVLIEDCVFDQGDDAISVKSGRDQDAWRLGVPSKNIVMRNCRIRNGH-QLMAIGSELS 60
Query: 62 GGISNVQVEKIH-------LYDSLNGIEF-RTTKGRGGYIKQIVISDAELYNI 106
GI NV V+ H + ++N + F +T + RGGY++ I +S+ +I
Sbjct: 61 AGIENVFVDNCHFDHSGSAVRSTINNLLFVKTNERRGGYVRNIHLSNVSATSI 113
>gi|257889043|ref|ZP_05668696.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
gi|257825106|gb|EEV52029.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
Length = 412
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V I +C +A G D I++KSG D G R ++ + I R ++S G V GSE+
Sbjct: 184 SSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGYG--VTIGSEV 241
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S G+S+V + I + S GI ++++ RGG I+ I + + + ++ F
Sbjct: 242 SAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPF 291
>gi|423223780|ref|ZP_17210249.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638155|gb|EIY32008.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 507
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 84/188 (44%), Gaps = 23/188 (12%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + +G D I LKSG DE G GR +V + + G V GSEM
Sbjct: 285 SCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCTVFKGHGGFVV-GSEM 343
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ NV V + G+ F++ +GRGG ++ I I + + +I N+ +G
Sbjct: 344 SGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAMMDIPTEPITFNLYYGGK 403
Query: 114 G-----NCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFAN 161
G +P LP +D+ T F++I N+ AG F GI E P
Sbjct: 404 SAVEVLESGEKVLAKVEP--LP-VDETTPCFRNIHVKNLVCAGARRALFFNGIPEMPIDG 460
Query: 162 ICLSNISL 169
I L +I +
Sbjct: 461 IVLEDIDI 468
>gi|329962420|ref|ZP_08300420.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529976|gb|EGF56864.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 532
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + I G DAI +KSG DE G G P +V ++ + G V GSEM
Sbjct: 293 SCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVVVKDNTVLHGHGGFVV-GSEM 351
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ N+ V + G+ F++T+GRGG ++ I I + + +I ++ +G
Sbjct: 352 SGGVKNIYVSDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHMIDIPHEPLLFDLFYGGK 411
Query: 114 GNCGSHPDDDFDPDALPAIDQIT-----FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
G + + I +T F+DI +++ G F G+ E P N+
Sbjct: 412 A-AGEETETELAGRMKANIPPVTVETPAFRDIHISHVICKGAGRAMFFNGLPEMPINNVS 470
Query: 164 LSNISL 169
+ N+ +
Sbjct: 471 VKNVVI 476
>gi|90020600|ref|YP_526427.1| glycoside hydrolase family protein [Saccharophagus degradans 2-40]
gi|89950200|gb|ABD80215.1| polygalacturonase-like protein [Saccharophagus degradans 2-40]
Length = 463
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 9/178 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG + G PT +V IR +++ G V GSE+
Sbjct: 269 SCKNVVIENCFFNTGDDCIAIKSGRNNDGRRLATPTENVIIRNCKMEAGHG-GVVIGSEI 327
Query: 61 SGGISNVQVEK--IHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS 118
SGG+ NV E + D GI +T RGG ++ I + + + + A
Sbjct: 328 SGGVRNVFAENNVMSSPDLEKGIRIKTNSVRGGLLENIYVRNCTIGEVQQAIVINFQYEE 387
Query: 119 HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLI--NPG 174
FD P + + ++++ + N G + AP N + + + + NPG
Sbjct: 388 GDAGKFD----PTVRNVEIRNLVCQHALQVFNIRGFERAPIQNFRIIDSTFVRGDNPG 441
>gi|431758794|ref|ZP_19547417.1| glycosyl hydrolase [Enterococcus faecium E3083]
gi|430616609|gb|ELB53505.1| glycosyl hydrolase [Enterococcus faecium E3083]
Length = 436
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V I +C +A G D I++KSG D G R ++ + I R ++S G V GSE+
Sbjct: 208 SSTDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGYG--VTIGSEV 265
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S G+S+V + I + S GI ++++ RGG I+ I + + + ++ F
Sbjct: 266 SAGVSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPF 315
>gi|256424869|ref|YP_003125522.1| glycoside hydrolase [Chitinophaga pinensis DSM 2588]
gi|256039777|gb|ACU63321.1| glycoside hydrolase family 28 [Chitinophaga pinensis DSM 2588]
Length = 521
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IE C + G D +LK+G E G+ G+PT +V IR L + G + GSE
Sbjct: 263 SSKNVLIEYCTLNCGDDCFTLKAGRGEDGLRIGKPTENVVIRYSLARQGHG-GITVGSET 321
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGG--------YIKQIVISDAELYNINVAFGA 112
+ I N+ V + D+ G+ F+T + RGG I+ + DA +++ GA
Sbjct: 322 AAMIRNLYVHDVVFDDTEVGLRFKTRRPRGGGGENLHYERIRMRLRLDAFRWDM---LGA 378
Query: 113 CGNCGSHPDD--DFDPDAL-PAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 167
G+ D + L P I KDI+ + GI E+P L N+
Sbjct: 379 RMYVGALADRLPALPVNKLTPVYRNIYAKDIVVDSARALVRVDGIPESPMTGFHLQNV 436
>gi|310642874|ref|YP_003947632.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|309247824|gb|ADO57391.1| Galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|392303699|emb|CCI70062.1| Polygalacturonase PG [Paenibacillus polymyxa M1]
Length = 453
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 80/180 (44%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C I +G D I++K+G ++ P ++ I + G+ V GSEM
Sbjct: 190 SCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITNCTMVHGHGA-VVLGSEM 246
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF--GACGNCGS 118
SG I NV + + GI ++ +GRGG I+ I IS+ + + F CG
Sbjct: 247 SGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRISNIVMEEVICPFILNLYYFCGP 306
Query: 119 HPDD----DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
D D +P D P +I F DI + A F G+ E A I SNI +
Sbjct: 307 RGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGLAEQYIAEITFSNIDI 366
>gi|308069843|ref|YP_003871448.1| polygalacturonase [Paenibacillus polymyxa E681]
gi|305859122|gb|ADM70910.1| Polygalacturonase (Pectinase) (PGL) [Paenibacillus polymyxa E681]
Length = 453
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C I +G D I++K+G ++ P ++ I + G+ V GSEM
Sbjct: 190 SCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITNCTMVHGHGA-VVLGSEM 246
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF--GACGNCGS 118
SG I NV + + GI ++ +GRGG I+ I +S+ + ++ F CG
Sbjct: 247 SGDIRNVTISNCVFKQTDRGIRLKSRRGRGGTIEDIRVSNIVMEDVICPFILNLYYFCGP 306
Query: 119 HPDD----DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
D D +P D P +I F DI + A F G+ E A I SNI +
Sbjct: 307 RGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGLAEQYIAEITFSNIDI 366
>gi|425057510|ref|ZP_18460923.1| polygalacturonase [Enterococcus faecium 504]
gi|403040305|gb|EJY51392.1| polygalacturonase [Enterococcus faecium 504]
Length = 436
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV + +C +A G D I++KSG D G R ++ + + R ++S G V GSE+
Sbjct: 208 SSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEV 265
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
S G+S+V + I + S GI +++K RG I+ I + + + ++ F
Sbjct: 266 SAGVSDVYIHDIDFFQSDCGIRMKSSKERGEVIENIRVENLNMIDVQFPF 315
>gi|375100883|ref|ZP_09747146.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661615|gb|EHR61493.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 460
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 14/173 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V IE G D++ +KSG D+ G GRP+ +V +R + G +A GSEM
Sbjct: 264 SSTDVLIEHNTFRTGDDSVVVKSGRDKDGRDIGRPSRNVVVRHNDMGGEDG--IALGSEM 321
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYN----INVAFGACGNC 116
SGGIS+V L I F+ RGG ++ I + + ++ + I G
Sbjct: 322 SGGISHVYFTDNTLRSGAAAIRFKGNLDRGGTVEHIRVRNFDIDSFERLIWFQLDYPGEL 381
Query: 117 GSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
G D P I F D T+ G AP ++ L NI++
Sbjct: 382 GG--------DFPPVYRDIVFSDFTVTSADTLLEIHGPDAAPLRDVTLRNITV 426
>gi|197105923|ref|YP_002131300.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479343|gb|ACG78871.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 468
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 16/172 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V IE+ G D++ +KSG D G GRP+ V +R + G +A GSEM
Sbjct: 266 SSTRVLIENSRFRTGDDSVVIKSGRDLDGRRIGRPSAWVLVRGNDMGGEDG--IALGSEM 323
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGG+ +V L L+ I F+ RGG ++++ + + + + F N
Sbjct: 324 SGGVHDVFFTDNVLRKGLSAIRFKANLDRGGTVERVRVRNMTVEDFGTLFWFQLNY---- 379
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQ-----EAPFANICLSNI 167
P L T++DI+ N + G T + +AP ++ L NI
Sbjct: 380 -----PGELGGNFPSTYRDIVFENFKVGGAGTFFEAHAPAQAPLKDVVLRNI 426
>gi|329964701|ref|ZP_08301755.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328525101|gb|EGF52153.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 506
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + +G D I LKSG DE G R +V + + G V GSEM
Sbjct: 285 SCRNALIVNSTFDVGDDGICLKSGKDEDGRRRARVCENVVVDGCTVFKGHGGFVV-GSEM 343
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ NV V + G+ F++ +GRGG ++ I +++ + +I N+ +G
Sbjct: 344 SGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWVTNVSMMDIPTEPITFNLYYGGK 403
Query: 114 GNCGSHPDDDFDP---DALPAIDQIT--FKDIIGTNITIAGN-----FTGIQEAPFANIC 163
+ P + LP +D+ T F++I N+ AG F GI E P I
Sbjct: 404 SAVEVLESGETVPAKVEPLP-VDETTPCFRNIHVRNLVCAGARRALFFNGIPEMPIDGIV 462
Query: 164 LSNISL 169
L +I +
Sbjct: 463 LEDIDI 468
>gi|257070016|ref|YP_003156271.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
gi|256560834|gb|ACU86681.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
Length = 431
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I DC I +G D I+LK+G + T +V I + G V GSEM
Sbjct: 187 SCRNVRISDCHIDVGDDCIALKAGTERTPDRVA--TENVTITGCTMVRGHGG-VVIGSEM 243
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVIS----DAELYNINV-AFGACGN 115
SGG+ NV + + GI +T + RGG ++ + +S D L + V F CG
Sbjct: 244 SGGVRNVVISNCVFQGADRGIRLKTRRDRGGTVENVRVSTIVMDDVLCPLTVNPFYFCGP 303
Query: 116 CGSHP---DDDFDP-DA-LPAIDQITFKDIIGTNITI-AGNFTGIQEAPFANICLSNISL 169
G P D P DA P + + + TN+ AG+ G+ EAP ++ L ++S+
Sbjct: 304 DGKEPHVGDRTARPVDAGTPHLRSLHLSHLTATNVHASAGHVFGLPEAPLSDFSLHDVSI 363
>gi|237712628|ref|ZP_04543109.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229453949|gb|EEO59670.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 478
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS+++ I I D IS+KSG DE G GRP+ ++ I G VA GSE+
Sbjct: 271 SSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAYGHG-GVAMGSEI 329
Query: 61 SGGISNVQVEKIHLYDSLNG--IEFRTTKGRGGYIKQIVISD------AELYNINVAFGA 112
SG I NV + L D+ N + F++ RGG ++ I D +++IN+ +
Sbjct: 330 SGDIRNVTIRSC-LMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGARSIFDINMEWRM 388
Query: 113 CGNCGSHPDDDFDPDALPA------IDQITFKDIIGTNITIAGNFTGIQEAPFAN 161
P LPA + I FK+I G + AG G +EAPF N
Sbjct: 389 V------------PPLLPAHYPLTCLRNIHFKNINGEAQS-AGTMYGFKEAPFGN 430
>gi|374324810|ref|YP_005077939.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
gi|357203819|gb|AET61716.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
Length = 476
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C I +G D I++K+G ++ P ++ I + G+ V GSEM
Sbjct: 213 SCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITNCTMVHGHGA-VVLGSEM 269
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF--GACGNCGS 118
SG I NV + + GI ++ +GRGG ++ I +S+ + ++ F CG
Sbjct: 270 SGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIVEDIRVSNIVMEDVICPFILNLYYFCGP 329
Query: 119 HPDD----DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
D D +P D P +I F DI + A F G+ E A I SNI +
Sbjct: 330 RGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGLAEQYIAEITFSNIDI 389
>gi|423239843|ref|ZP_17220958.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei CL03T12C01]
gi|392645468|gb|EIY39195.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei CL03T12C01]
Length = 1095
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS+++ I I D IS+KSG DE G GRP+ ++ I G VA GSE+
Sbjct: 888 SSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAYGHG-GVAMGSEI 946
Query: 61 SGGISNVQVEKIHLYDSLNG--IEFRTTKGRGGYIKQIVISD------AELYNINVAFGA 112
SG I NV + L D+ N + F++ RGG ++ I D +++IN+ +
Sbjct: 947 SGDIRNVTIRSC-LMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGARSIFDINMEWRM 1005
Query: 113 CGNCGSHPDDDFDPDALPA------IDQITFKDIIGTNITIAGNFTGIQEAPFAN 161
P LPA + I FK+I G + AG G +EAPF N
Sbjct: 1006 V------------PPLLPAHYPLTCLRNIHFKNINGEAQS-AGTMYGFKEAPFGN 1047
>gi|393764308|ref|ZP_10352920.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
gi|392604938|gb|EIW87837.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
Length = 481
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S + V IE+C+ G D I+LKSG + G P +V I+ ++++ G V GSE+
Sbjct: 287 SCNRVLIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHG-GVVMGSEI 345
Query: 61 SGGISNVQVEKIHLY--DSLNGIEFRTTKGRGGYIKQIVISDAELYNINVA-----FGAC 113
SGG N+ + + + GI +T RGG I+ + I D E+ + A F
Sbjct: 346 SGGARNIFARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEE 405
Query: 114 GNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
G+ G+ +P ++ + ++ A G + AP + + L ++
Sbjct: 406 GDAGNF---------MPQVNNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQF 452
>gi|397170830|ref|ZP_10494240.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
gi|396087304|gb|EJI84904.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
Length = 481
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S + V IE+C+ G D I+LKSG + G P +V I+ ++++ G V GSE+
Sbjct: 287 SCNRVLIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHG-GVVMGSEI 345
Query: 61 SGGISNVQVEKIHLY--DSLNGIEFRTTKGRGGYIKQIVISDAELYNINVA-----FGAC 113
SGG N+ + + + GI +T RGG I+ + I D E+ + A F
Sbjct: 346 SGGARNIFARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEE 405
Query: 114 GNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
G+ G+ +P ++ + ++ A G + AP + + L ++
Sbjct: 406 GDAGNF---------MPQVNNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQF 452
>gi|333382504|ref|ZP_08474174.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828815|gb|EGK01507.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
Length = 717
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS + +E+C I D LKSG D G+ RPT + IR + + G + GSE
Sbjct: 245 SSSYILVENCDIDCNDDNFCLKSGRDADGLRVNRPTEYIVIRNCI-SRAGGGLLTCGSET 303
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGN 115
SGGI +V E + + GI ++ RGG + I I D E+ N+ F A N
Sbjct: 304 SGGIRHVLAEGLKAKGTTVGIRLKSAMNRGGTTEHIYIRDVEMDNVRTVFEATMN 358
>gi|212690884|ref|ZP_03299012.1| hypothetical protein BACDOR_00372 [Bacteroides dorei DSM 17855]
gi|345512466|ref|ZP_08791992.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|212666566|gb|EEB27138.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229438023|gb|EEO48100.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
Length = 1095
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS+++ I I D IS+KSG DE G GRP+ ++ I G VA GSE+
Sbjct: 888 SSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAYGHG-GVAMGSEI 946
Query: 61 SGGISNVQVEKIHLYDSLNG--IEFRTTKGRGGYIKQIVISD------AELYNINVAFGA 112
SG I NV + L D+ N + F++ RGG ++ I D +++IN+ +
Sbjct: 947 SGDIRNVTIRSC-LMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGARSIFDINMEWRM 1005
Query: 113 CGNCGSHPDDDFDPDALPA------IDQITFKDIIGTNITIAGNFTGIQEAPFAN 161
P LPA + I FK+I G + AG G +EAPF N
Sbjct: 1006 V------------PPLLPAHYPLTCLRNIHFKNINGEAQS-AGTMYGFKEAPFGN 1047
>gi|423229002|ref|ZP_17215407.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei CL02T00C15]
gi|423244841|ref|ZP_17225915.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei CL02T12C06]
gi|392634755|gb|EIY28667.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei CL02T00C15]
gi|392641228|gb|EIY35012.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei CL02T12C06]
Length = 1095
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS+++ I I D IS+KSG DE G GRP+ ++ I G VA GSE+
Sbjct: 888 SSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAYGHG-GVAMGSEI 946
Query: 61 SGGISNVQVEKIHLYDSLNG--IEFRTTKGRGGYIKQIVISD------AELYNINVAFGA 112
SG I NV + L D+ N + F++ RGG ++ I D +++IN+ +
Sbjct: 947 SGDIRNVTIRSC-LMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGARSIFDINMEWRM 1005
Query: 113 CGNCGSHPDDDFDPDALPA------IDQITFKDIIGTNITIAGNFTGIQEAPFAN 161
P LPA + I FK+I G + AG G +EAPF N
Sbjct: 1006 V------------PPLLPAHYPLTCLRNIHFKNINGEAQS-AGTMYGFKEAPFGN 1047
>gi|315500573|ref|YP_004089375.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315418585|gb|ADU15224.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 476
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS + +E I DA+ LK+G D G+ RPT +V IR ++++ + V FGSE
Sbjct: 247 SSHTILVEHADIDANDDALCLKAGRDADGLRVNRPTENVVIRNSTIRAAY-AGVTFGSET 305
Query: 61 SGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIKQIVISDAEL------YNINVAFGAC 113
SGGI NV+V + + + GI F++ RGG I ISD ++ IN+ +
Sbjct: 306 SGGIRNVRVHDLRVIGPVRYGILFKSAATRGGGASDIDISDIDVAQAETGIRINLNWFPA 365
Query: 114 GNCGSHPDDDFDPDA--------------LPAIDQITFKDIIGTNITIAGNFTGIQEAPF 159
+ P+ A LP + I + + + A + + P
Sbjct: 366 YSYAKIPEGLTAYPAYWATLTAPVPRSKGLPQVHNIRIRRVTAKGLKTAVDLEAYADVPL 425
Query: 160 ANICLSNISL 169
+NI + +++L
Sbjct: 426 SNIQIEDVTL 435
>gi|319643150|ref|ZP_07997780.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520559|ref|ZP_08799946.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254835079|gb|EET15388.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317385228|gb|EFV66177.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 1095
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 73/163 (44%), Gaps = 5/163 (3%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS+++ I I D IS+KSG DE G GRP+ ++ I G VA GSE+
Sbjct: 888 SSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAYGHG-GVAMGSEI 946
Query: 61 SGGISNVQVEKIHLYDSLNG--IEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS 118
SGGI NV + L D+ N + F++ RGG ++ I D + F
Sbjct: 947 SGGIRNVTIRSC-LMDNENWSPLRFKSQPSRGGTVENITFEDITIKGARSIFDINMEWRM 1005
Query: 119 HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFAN 161
P L + I FK+I G + AG G +E PF N
Sbjct: 1006 VPPLSPAHYPLTCLRNIHFKNINGEAQS-AGTMYGFKETPFGN 1047
>gi|167765390|ref|ZP_02437503.1| hypothetical protein BACSTE_03778 [Bacteroides stercoris ATCC
43183]
gi|167697018|gb|EDS13597.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 452
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 19/182 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE +G D I++KSG D+ G G+ T +V IR + ++ GSEM
Sbjct: 259 SCTNVLIEGMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHF---ARWAITVGSEM 315
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQI----VISDAELYN-INVAFGACG- 114
SGG+ N+ +E + NGI F++ RGGY + + + +D L+ IN G
Sbjct: 316 SGGVRNIYIEDCKIDSCRNGIYFKSNPDRGGYFENLNMRRIEADVCLWGVINFRTNYHGY 375
Query: 115 NCGSHPDDDFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISLLINP 173
G+HP I +D+ + ++A G+ EA NI L NI++ P
Sbjct: 376 RGGNHP---------TLFRNICIEDVTCNRVDSVALMANGLPEAKLHNITLRNINVKKAP 426
Query: 174 GS 175
+
Sbjct: 427 KA 428
>gi|238917515|ref|YP_002931032.1| glycoside hydrolase family 28 [Eubacterium eligens ATCC 27750]
gi|238872875|gb|ACR72585.1| Glycoside Hydrolase Family 28 [Eubacterium eligens ATCC 27750]
Length = 518
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 16/183 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V + I++G D I++KSG PT D+ +R+ ++ G+ V GSE+
Sbjct: 279 SCQDVLVLGTYISVGDDCIAIKSGKIYMAQKEKTPTEDMTVRQCCMRDGHGA-VTVGSEI 337
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGY--IKQIVISDAELYNINVAF-------- 110
+ G+ +V + ++ G+ +T +GRG + I + ++ N+ F
Sbjct: 338 AAGVKDVHIRDCMFMNTDRGLRVKTRRGRGKLSVLDDISFENIDMDNVMTPFVVNSFYFC 397
Query: 111 ---GACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSN 166
G GS D D P+I +TFKDI N +AG + G+ E+ + N
Sbjct: 398 DPDGKTEYVGSRKPLPVD-DRTPSIKSLTFKDINAKNCHVAGAYIFGLPESKVEKLTFEN 456
Query: 167 ISL 169
I+
Sbjct: 457 INF 459
>gi|322437527|ref|YP_004219617.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165420|gb|ADW71123.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 467
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V I+ C IA G D ISLKSG E RPT DV I L+ + + GSE
Sbjct: 230 SCRHVLIDTCDIASGDDCISLKSGRGEEAYQLARPTEDVRIVNCTLEGRGFACIGIGSET 289
Query: 61 SGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
S GI V +E + + ++ GRG +I+ + + D + + F +
Sbjct: 290 SAGIRRVLIEGCRVTSVYKFAVYIKSRVGRGAFIEDLTVRDMSAAKMRMGFLKISQTSAG 349
Query: 120 PDDDFDP----DALPAIDQITFKDI 140
D+ +P D LP I+F I
Sbjct: 350 VQDE-NPVPGLDGLPLFRNISFLRI 373
>gi|388258052|ref|ZP_10135230.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
gi|387938173|gb|EIK44726.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
Length = 513
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 21/189 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V +E I + DA+ LK+G D G+ RPT V IR +++ + + V FGSE
Sbjct: 277 SSHHVLVEKADIDVNDDALCLKAGRDADGLRVNRPTEHVVIRDSIIRHAE-AGVTFGSET 335
Query: 61 SGGISNVQVEKIHLYDSL-NGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGN---C 116
SG I N+ V + + + +GI F++ RGG + I I D ++ N A N
Sbjct: 336 SGSIRNIDVYNLDVQGPVYSGIFFKSAHVRGGTVSDIRIRDMKVQNAEAAVRVDLNWLPV 395
Query: 117 GSHP---------DDDFDPDALPAIDQI---TFKDIIGTNITIAGN----FTGIQEAPFA 160
S+P + + A P + +DI +NI N G EAP
Sbjct: 396 YSYPVIPPGIKNVPEHWKILATPVPKEKGMPKLRDIHISNIKAEANAAFLMQGYAEAPLQ 455
Query: 161 NICLSNISL 169
N+ SN+ +
Sbjct: 456 NVHFSNMHI 464
>gi|419720997|ref|ZP_14248200.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
gi|383302819|gb|EIC94301.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
Length = 526
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 14/182 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +NV I I++G D +++KSG + + +P ++ IR + + GS V GSE+
Sbjct: 280 SCENVLILGADISVGDDCVAIKSGKYYMALKHYKPAKNIVIRNSIFRKGHGS-VTIGSEV 338
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGACGNCGS 118
+ G+ +V VEK + G+ +T +GRG + I + + ++ + F A
Sbjct: 339 AAGVYDVSVEKCIFEGTDRGLRIKTRRGRGEKSVLDNICFENILMKDVCMPFTANMFYFC 398
Query: 119 HPDDDFD----------PDALPAIDQITFKDIIGTNIT-IAGNFTGIQEAPFANICLSNI 167
PD D + P I +I +DI N+ I G+ E P I L NI
Sbjct: 399 DPDGHSDYVQNQDKMEVNEKTPKIGKIAARDIRCENVKNIFACLYGLPEMPVEEIVLENI 458
Query: 168 SL 169
+L
Sbjct: 459 TL 460
>gi|313114438|ref|ZP_07799963.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623236|gb|EFQ06666.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 510
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 22/181 (12%)
Query: 12 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 71
I +G D I++K+ G+ + IR LL G + GSEMSGG+ ++ V +
Sbjct: 282 IHVGDDCIAMKASKVFLGMKLKKSCEHTVIRNCLLDKGHGG-IVIGSEMSGGVKDMVVTQ 340
Query: 72 IHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAF-------------GACGNC 116
+ + G+ +T +GRG I +V + E+ + F G C
Sbjct: 341 CLMDHTDRGLRVKTRRGRGNTAVIDGLVFRNVEMRGVKAPFVINMFYFCDPDGHGPYVQC 400
Query: 117 -GSHPDDDFDPDALPAIDQITFKDIIGTNITIAG-NFTGIQEAPFANICLSNISLLINPG 174
+ P D++ P + +T +DI+ T+ AG F G+ E P + + N+++ +P
Sbjct: 401 RDAMPVDEY----TPKLGSLTMEDIVATDAQFAGCYFDGLPEQPIERVSMKNVTITFDPN 456
Query: 175 S 175
+
Sbjct: 457 A 457
>gi|375109255|ref|ZP_09755504.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
gi|374570559|gb|EHR41693.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
Length = 481
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S + V IE+C+ G D I+LKSG + G P +V I+ ++++ G V GSE+
Sbjct: 287 SCNRVLIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHG-GVVMGSEI 345
Query: 61 SGGISNVQVEKIHLY--DSLNGIEFRTTKGRGGYIKQIVISDAELYNINVA-----FGAC 113
SGG N+ + + + GI +T RGG I+ + I D E+ + A F
Sbjct: 346 SGGARNIFARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEE 405
Query: 114 GNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
G+ G+ +P + + ++ A G + AP + + L ++
Sbjct: 406 GDAGNF---------MPQVKNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQF 452
>gi|299144965|ref|ZP_07038033.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
gi|336412843|ref|ZP_08593196.1| hypothetical protein HMPREF1017_00304 [Bacteroides ovatus
3_8_47FAA]
gi|298515456|gb|EFI39337.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
gi|335942889|gb|EGN04731.1| hypothetical protein HMPREF1017_00304 [Bacteroides ovatus
3_8_47FAA]
Length = 527
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 78/188 (41%), Gaps = 16/188 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE + G D +LK+G E G+ G+ T +V IR L + G + GSE
Sbjct: 265 SCKNVLIEYSTLNCGDDCFTLKAGRAEDGLRVGKATENVVIRYSLAKDGHGG-ITCGSET 323
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFG--------A 112
+GGI N+ + + GI F+T + R G + I+ + + N+ AF
Sbjct: 324 AGGIENIYLHDCVFDGTQVGIRFKTRRNRAGGVSDILYENIRMTNVGEAFKWDLLGSKRY 383
Query: 113 CGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLIN 172
G S P I I ++ I + + GI E P +NI + N
Sbjct: 384 MGELASRIPPRAVNRLTPVIKDIKIRNFIVESAHKVLSINGIPEVPCSNILIEN------ 437
Query: 173 PGSYNSWE 180
G NS E
Sbjct: 438 -GKINSQE 444
>gi|281421112|ref|ZP_06252111.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281404647|gb|EFB35327.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 524
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 18/186 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + +G D I +KSG D G G P +V + + G V GSEM
Sbjct: 284 SCKNALIVNSTFDVGDDGICIKSGKDADGRKRGIPCENVIVNGCTVFKGHGGFVV-GSEM 342
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ N++V + G+ F++T+GRGG ++ I I + +++I ++ +G
Sbjct: 343 SGGVKNIKVSDCQFLGTDVGLRFKSTRGRGGIVENIYIDNMSMFDIQTDVITFDLYYGGK 402
Query: 114 GNCGSHPDDD---------FDPD-ALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANIC 163
D D F D P I +I A F G+ E P +NI
Sbjct: 403 SAVEVLNDGDEAKSQKVQKFKVDETTPCFRNIDINHVICRTARRAAYFNGLPEMPVSNIH 462
Query: 164 LSNISL 169
+ ++ +
Sbjct: 463 IKDMEV 468
>gi|420156232|ref|ZP_14663077.1| pectate lyase family protein [Clostridium sp. MSTE9]
gi|394757879|gb|EJF40876.1| pectate lyase family protein [Clostridium sp. MSTE9]
Length = 511
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 18/181 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +NV I C +G D I++KSG + RP+ + +RR L++ G V GSE+
Sbjct: 277 SCENVEIVGCRFQVGDDCIAIKSGKLFLSRRHLRPSRKITVRRCLMEEGHGG-VVIGSEI 335
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGACGNCGS 118
S G+ +V V+ + G +T +GRG + + S ++ ++ F N
Sbjct: 336 SCGVQDVLVQNCLFRRTDRGFRIKTRRGRGSTSVVDGVRFSHVKMEQVSHCFVI--NMFY 393
Query: 119 HPDDDFDPDAL------------PAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLS 165
H D D D + PA+ IT DI I + F G+ E+P N+ +
Sbjct: 394 HCDPDGHSDLVQCKEALPVGAETPAVQNITLSDICADEIAGSAVFLYGLPESPIRNVTVK 453
Query: 166 N 166
N
Sbjct: 454 N 454
>gi|329894082|ref|ZP_08270067.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
gi|328923254|gb|EGG30574.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
Length = 487
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 9/173 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S + V IEDC+ G D I+LKSG + G G P DV ++ ++ G V GSE+
Sbjct: 282 SCERVVIEDCVFDTGDDCIALKSGRNADGRRIGVPCKDVVVQNCHMKEGHG-GVVIGSEI 340
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG 117
SGG++NV V + DS + I +T RGG I+ + S + ++ F
Sbjct: 341 SGGVANVHVRHCTM-DSPHLERAIRIKTNAQRGGLIEHLRYSKITIGSVKDVF----VIN 395
Query: 118 SHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLL 170
+ ++ +P + I D+ N G ++P ++ L N +++
Sbjct: 396 FYYEEGDRGKWMPLVRDIEITDLTVAKAQRVFNLRGFPQSPITDVSLRNWNVV 448
>gi|302672206|ref|YP_003832166.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
gi|302396679|gb|ADL35584.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
Length = 519
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N + C D++++KSG + G RPT HIR + G + GSEM
Sbjct: 312 SSTNSTLYACDFYTEDDSVAIKSGKNPEGNVINRPTK--HIRVFDSVTHFGHGLCIGSEM 369
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV 108
SGG+ +V++ + + +GIE + TK RGGY++ I++ D +I +
Sbjct: 370 SGGVEDVRLWDCQMGPTWSGIEIKATKKRGGYVRNILVRDITASHIQM 417
>gi|257440293|ref|ZP_05616048.1| polygalacturonase [Faecalibacterium prausnitzii A2-165]
gi|257197327|gb|EEU95611.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii A2-165]
Length = 518
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 14/177 (7%)
Query: 12 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 71
I +G D I++K+ G+ + IR LL G + GSEMSGG+ ++ V +
Sbjct: 290 IHVGDDCIAMKASKVFLGMKLKKSCEHTVIRNCLLDKGHGG-IVIGSEMSGGVKDMVVTQ 348
Query: 72 IHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGA-----CGNCGSHP---- 120
+ + G+ +T +GRG I +V + E+ + F C G P
Sbjct: 349 CLMDHTDRGLRVKTRRGRGNTAVIDGLVFRNVEMRGVKTPFVINMFYFCDPDGHSPYVQC 408
Query: 121 DDDFDPDAL-PAIDQITFKDIIGTNITIAG-NFTGIQEAPFANICLSNISLLINPGS 175
D D P + +T +DI+ T+ AG F G+ E P I + N+++ +P +
Sbjct: 409 RDAMPVDEYTPKLGSLTMEDIVATDAQFAGCYFDGLPEQPIERISMKNVTITFDPNA 465
>gi|404484304|ref|ZP_11019517.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
gi|404342621|gb|EJZ68992.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
Length = 526
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 14/182 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +NV I I++G D +++KSG + + +P ++ IR + + GS V GSE+
Sbjct: 280 SCENVLILGADISVGDDCVAIKSGKYYMALKHYKPAKNIVIRNSIFRKGHGS-VTIGSEV 338
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGACGNCGS 118
+ G+ +V VEK + G+ +T +GRG + I + + ++ + F A
Sbjct: 339 AAGVYDVSVEKCIFEGTDRGLRIKTRRGRGEKSVLDNICFENIIMKDVCMPFTANMFYFC 398
Query: 119 HPDDDFD----------PDALPAIDQITFKDIIGTNIT-IAGNFTGIQEAPFANICLSNI 167
PD D + P I +I +DI N+ I G+ E P I L NI
Sbjct: 399 DPDGHSDYVQNQDKMEVNEKTPKIGKIAARDIRCENVKNIFACLYGLPEMPVEEIVLENI 458
Query: 168 SL 169
+L
Sbjct: 459 TL 460
>gi|427404324|ref|ZP_18895064.1| hypothetical protein HMPREF9710_04660 [Massilia timonae CCUG 45783]
gi|425717175|gb|EKU80141.1| hypothetical protein HMPREF9710_04660 [Massilia timonae CCUG 45783]
Length = 619
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S D V ++DC+ G D I++K+G +G PT +V IR ++ S G V GSEM
Sbjct: 366 SCDGVLVDDCLFNNGDDCIAIKAG-KNLDTGHG-PTRNVVIRNCVMNSGHGG-VTLGSEM 422
Query: 61 SGGISNVQVEKIHLY------DSLN-GIEFRTTKGRGGYIKQIVISDAEL 103
+GGI +V EK+ D LN I +T RGG+++ + + D L
Sbjct: 423 AGGIEHVYAEKLEFRNIHWKDDPLNTAIRLKTNMNRGGFLRHLYVRDVTL 472
>gi|423312659|ref|ZP_17290596.1| hypothetical protein HMPREF1058_01208 [Bacteroides vulgatus
CL09T03C04]
gi|392687393|gb|EIY80686.1| hypothetical protein HMPREF1058_01208 [Bacteroides vulgatus
CL09T03C04]
Length = 849
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 17/179 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS++V IE C + D ++KSG E G+ RPT++V IR+ + +G V G+E+
Sbjct: 249 SSNDVLIEYCSLDCQDDCYTMKSGRGEDGLKVNRPTSNVVIRKSIALRGAGGIVC-GTEI 307
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA--CGNCGS 118
+GG+ NV + + F+T + RGG+++ I + E NV A C GS
Sbjct: 308 AGGVRNVYMHDCVFEGTDQAFRFKTRRPRGGFVENIYV---ERVRANVKRQALYCDMLGS 364
Query: 119 ----------HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 167
+P + P P I+ D+ T + + + E P N N+
Sbjct: 365 ARWVGELAQRYPAREITP-LTPWFANISIHDVEITGCSTLVDVAALPEKPVKNFFFGNV 422
>gi|402307601|ref|ZP_10826623.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400378313|gb|EJP31171.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 471
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IED G D +++KSG D G + P+ ++ IRR + +V GSEM
Sbjct: 265 SSRNVLIEDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRCRFKGL--HAVVIGSEM 322
Query: 61 SGGISNVQVEKIHLYD-SLNGIEFRTTKGRGGYIKQIVISDAEL 103
SGG+ NV VE G+ +T RGGY+K I + D
Sbjct: 323 SGGVRNVFVEDCDFAGYCKRGLYIKTNPDRGGYVKNIYMKDCRF 366
>gi|189461873|ref|ZP_03010658.1| hypothetical protein BACCOP_02539 [Bacteroides coprocola DSM 17136]
gi|189431467|gb|EDV00452.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 494
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 18/201 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + +G D I LKSG DE G R +V + + G V GSEM
Sbjct: 285 SCKNALIVNSSFDVGDDGICLKSGKDEDGRRRARACENVIVDGCTVYKGHGGFVV-GSEM 343
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG+ N+ V + G+ F++ +GRGG ++ I I + + +I N+ +G
Sbjct: 344 SGGVRNISVNNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISMIDIPTEPVTFNLYYGGK 403
Query: 114 GNCGSHPDDDFDP---------DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICL 164
+ P + P I + + +N A F GI E P I L
Sbjct: 404 SAVEVLESGEVVPVKVAPMPVDETTPCFRNIHIEHLTCSNARRAMYFNGIPEMPIDGITL 463
Query: 165 SNISLLINPGSYNSWECSNIH 185
+I + + C NIH
Sbjct: 464 KHIRISAK-NDAEFYYCKNIH 483
>gi|410634542|ref|ZP_11345177.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
gi|410145928|dbj|GAC22044.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
Length = 477
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 17/174 (9%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
+V IE+CI G D I++KSG + G G+P ++ I ++S G V GSE+SGG
Sbjct: 283 DVLIENCIFDTGDDCIAIKSGRNADGRRVGQPCENILINNCQMRSGHG-GVVIGSEISGG 341
Query: 64 ISNVQVEKIHLY--DSLNGIEFRTTKGRGGYIKQIVISDAELYNINVA-----FGACGNC 116
+ N+ + + D GI +T RGG++K + D + + A + G+
Sbjct: 342 VRNLYAQNCEMSSPDLDRGIRIKTNSIRGGHLKNLNYRDIRIGQVKEAVVINFYYEEGDV 401
Query: 117 GSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLL 170
G P ++ I +++ + T A + G P + + N+++L
Sbjct: 402 GKF---------TPVLEDINIENLYVEHATRAFSLRGYPHTPITGVSIKNLTIL 446
>gi|288925897|ref|ZP_06419827.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288337321|gb|EFC75677.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 459
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IED G D +++KSG D G + P+ ++ IRR + +V GSEM
Sbjct: 253 SSRNVLIEDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRCRFKGL--HAVVIGSEM 310
Query: 61 SGGISNVQVEKIHLYD-SLNGIEFRTTKGRGGYIKQIVISDAEL 103
SGG+ NV VE G+ +T RGGY+K I + D
Sbjct: 311 SGGVRNVFVEDCDFAGYCKRGLYIKTNPDRGGYVKNIYMKDCRF 354
>gi|315606960|ref|ZP_07881966.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315251341|gb|EFU31324.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 459
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IED G D +++KSG D G + P+ ++ IRR + +V GSEM
Sbjct: 253 SSRNVLIEDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRCRFKGL--HAVVIGSEM 310
Query: 61 SGGISNVQVEKIHLYD-SLNGIEFRTTKGRGGYIKQIVISDAEL 103
SGG+ NV VE G+ +T RGGY+K I + D
Sbjct: 311 SGGVRNVFVEDCDFAGYCKRGLYIKTNPDRGGYVKNIYMKDCRF 354
>gi|379727941|ref|YP_005320126.1| polygalacturonase [Melissococcus plutonius DAT561]
gi|376318844|dbj|BAL62631.1| polygalacturonase [Melissococcus plutonius DAT561]
Length = 442
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N+ I +C I +G D I++KSG ++ + ++ I + G+ V GSEM
Sbjct: 192 SCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKSA-CENITISNCTMVHGHGA-VVLGSEM 249
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF--GACGNCGS 118
SG I NV + + GI +T +GRGG ++ I +S + ++ F A CG
Sbjct: 250 SGNIRNVTISNCVFQQTDRGIRMKTRRGRGGVVENITVSTIVMEDVLCPFVINAYYFCGP 309
Query: 119 HPDDDFDPDA--------LPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
+ + D P I F +I+ + A F G+ E P ++ +NI +
Sbjct: 310 KGKEKYVWDKNPYPITKETPCFRSIHFSNIVAKKVRAAAGFIYGLPEMPVQDVSFTNIQI 369
>gi|354594579|ref|ZP_09012618.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
gi|353672255|gb|EHD13955.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
Length = 430
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 17/180 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS + I D I+ G D IS+KSG + P D+ I+ L+ G ++ GSE
Sbjct: 217 SSQYIQISDVDISTGDDNISIKSGLQQ---GNALPARDITIKNSLMHDGHG--ISIGSET 271
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN--VAFGACGNCGS 118
+ GI V ++ IH S NGI ++ + RG I I + ++ N+ + A + S
Sbjct: 272 ANGIGKVTIQNIHFSGSTNGIRIKSQRDRGNSIGPITVDHIQMENVTNPIVINASYSVNS 331
Query: 119 HPDDDFDPDAL---------PAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ F +AL P I I DI N + +G+ EA NI L +I +
Sbjct: 332 YKKRSF-KEALKQKELTSLTPLIHDILLSDIHVVNADNSIILSGLPEAFIWNIVLDHIFM 390
>gi|325103067|ref|YP_004272721.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971915|gb|ADY50899.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 528
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 9/174 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IE C ++ G D ++K+G E G+ +PT +V +R L + G + GSE
Sbjct: 282 SSKNVLIEYCTLSCGDDCFTMKAGRGEDGLRVNKPTENVVVRFCLAKEGHG-GITVGSET 340
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGG-----YIKQIVIS---DAELYNINVAFGA 112
+ I+N+ V D+ GI F+T + RGG Y ++I ++ +A +++ +
Sbjct: 341 AAKINNLYVHDTVFDDTGVGIRFKTRRPRGGGGANYYYERIRMNLRDEAFRWDMLGSPMH 400
Query: 113 CGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
G P+ + KDII N GI E P N L N
Sbjct: 401 VGKLAERLPALPINSLTPSFKNTSAKDIIVENAKAFVRIEGIPETPMQNFRLEN 454
>gi|374313032|ref|YP_005059462.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
gi|358755042|gb|AEU38432.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
Length = 420
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 22/186 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQS---SSGSSVAFG 57
SS N+ I+ ++G D +++KSG A P D + + + +G ++ G
Sbjct: 211 SSSNIVIDHVFSSVGDDNVAIKSG------AINSPGPDAPSKNITITDCTFENGHGLSIG 264
Query: 58 SEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF------- 110
SE++GG+ NV E+IH + GI + + RG + I D ++ ++ A
Sbjct: 265 SEIAGGVQNVHAERIHFKGTDQGIRIKANRDRGNDVSNISFKDIDMVDVKTAILITEYYP 324
Query: 111 --GACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNIS 168
G S P P I +++ T AG G+ E+P + L N+
Sbjct: 325 KAAPDGEVPSMPMGRL----TPRFHDIAIENVHATGSGSAGTIVGLPESPVEGLSLKNVD 380
Query: 169 LLINPG 174
L G
Sbjct: 381 LQAKTG 386
>gi|182416092|ref|YP_001821158.1| glycoside hydrolase [Opitutus terrae PB90-1]
gi|177843306|gb|ACB77558.1| glycoside hydrolase family 28 [Opitutus terrae PB90-1]
Length = 543
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 15/176 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE C+ G D + LKSG++E G RPT +V +R G V GSEM
Sbjct: 258 SCRNVLIEHCVFDTGDDCVVLKSGYNEDGWRVARPTENVVMRWCSSARGHGGLVV-GSEM 316
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISD-------AELYNINVAFGAC 113
SG + NV + + + ++ +GRGG ++ I + E+ +N+ +GA
Sbjct: 317 SGDVRNVYMHDCDFAGTDRAVRIKSRRGRGGVVENIWAENLRVRDMQQEVVILNMDYGAD 376
Query: 114 GNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
N + P I + + A G+ ++P ++ ++++
Sbjct: 377 RNQAFT-------EKPPLFRNIHVRRVTADGAPAAIRIAGLADSPIEHVTFEDLTI 425
>gi|393781473|ref|ZP_10369668.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
gi|392676536|gb|EIY69968.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
Length = 537
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + + G DAI +KSG D G G P +V ++ ++ G V GSEM
Sbjct: 294 SCKNALIINSLFDAGDDAICIKSGKDADGRRRGEPCQNVLVKNNIVLHGHGGFVV-GSEM 352
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIK-------QIVISDAELYNINVAFGAC 113
SGG+ N+ V + G+ F++T+GRGG ++ ++ E ++ +G
Sbjct: 353 SGGVKNIYVTDCTFMGTDVGLRFKSTRGRGGVVEGIYINNINMINIPNEPLLFDLFYGGK 412
Query: 114 GNCGSHPDD---DFDPDALPAIDQI-TFKDIIGTNITIAGN-----FTGIQEAPFANICL 164
G ++ + D P ++ F+DI +N+ G+ F G+ E P N+ +
Sbjct: 413 GPGEETEEERAANTKTDVPPVTEETPAFRDIHISNVYCKGSGRAMFFNGLPEMPIRNVTV 472
Query: 165 SNISL 169
N+ +
Sbjct: 473 KNVVI 477
>gi|265752310|ref|ZP_06088103.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263237102|gb|EEZ22572.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 1095
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 79/175 (45%), Gaps = 29/175 (16%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS+++ I I D IS+KSG DE G GRP+ ++ I G VA GSE+
Sbjct: 888 SSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAYGHG-GVAMGSEI 946
Query: 61 SGGISNVQVEKIHLYDSLNG--IEFRTTKGRGGYIKQIVISD------AELYNINVAFGA 112
SG I NV + L D+ N + F++ RGG ++ I D +++IN+ +
Sbjct: 947 SGDIRNVTIRSC-LMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGARSIFDINMEWRM 1005
Query: 113 CGNCGSHPDDDFDPDALPA------IDQITFKDIIGTNITIAGNFTGIQEAPFAN 161
P LPA + I FK+I G + AG G +E PF N
Sbjct: 1006 V------------PPLLPAHYPLTCLRNIHFKNINGEAQS-AGTMYGFKETPFGN 1047
>gi|408369543|ref|ZP_11167324.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407745289|gb|EKF56855.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 466
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 13/175 (7%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S NV I +C+ G D I++KSG ++ G G + ++ + +++ G V GSE+S
Sbjct: 271 SKNVHITNCVFDTGDDCIAIKSGRNDEGRRVGIVSENIVVENCIMKDGHG-GVVMGSEIS 329
Query: 62 GGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS 118
G+ NV V + DS N I +T RGG+++ + + D ++ + AF N
Sbjct: 330 AGVRNVYVRNCKM-DSPNLDRAIRIKTNTLRGGFVENVFVKDIQVGQVKEAFLKI-NTYY 387
Query: 119 HPDDDFDPDALPAIDQITFKDIIGTNITIAGNF----TGIQEAPFANICLSNISL 169
D+ + + +P I I +++ + G + G +E P N+ N+++
Sbjct: 388 AIYDNQEGEHIPTIKNIHIENV---TVEDGGKYGILIQGREENPVKNVTFKNVTI 439
>gi|329962597|ref|ZP_08300545.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529628|gb|EGF56526.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 454
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 86/185 (46%), Gaps = 25/185 (13%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+ +G D I++KSG D+ G G+ T +V IR + ++ GSE
Sbjct: 257 SCTNVLIENMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHF---ARWAITIGSET 313
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQI----VISDAELYNINVAF-----G 111
SGG+ NV +E + NGI F++ RGGY + + + +D L+ + V F G
Sbjct: 314 SGGVRNVYIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEADVCLWGV-VNFRTNYHG 372
Query: 112 ACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISLL 170
G G+HP I +DI + ++A G+ EA NI L NI +
Sbjct: 373 YRG--GNHP---------TLFRNICIEDINCNRVDSVALMANGLPEAKLYNITLRNIKVK 421
Query: 171 INPGS 175
P +
Sbjct: 422 KAPKA 426
>gi|320107891|ref|YP_004183481.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319926412|gb|ADV83487.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 408
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 12/175 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSS---GSSVAFG 57
+S + I+ I G D +++KSG G P D+ R + + G ++ G
Sbjct: 201 ASTKIVIDHVYIDTGDDNVAIKSGQP------GSPGPDLPSRDITITDCEFLHGHGLSIG 254
Query: 58 SEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG 117
SE++GG+ NV+ E+IH + GI ++ + RG I V D + N+ A
Sbjct: 255 SEIAGGVQNVRAERIHFKGTDQGIRVKSNRDRGNDIGNFVFRDITMENVKTAILLSEFYP 314
Query: 118 SHPD---DDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
PD ++ P IT +++ A G+ E+P N+ L+N+ +
Sbjct: 315 KIPDTITEEPVTRLTPHFHDITIENVQAVGSRDAAVIVGLPESPIRNLKLTNVHI 369
>gi|295103112|emb|CBL00656.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 518
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 22/181 (12%)
Query: 12 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 71
I +G D I++K+ G+ R IR LL G + GSEMSGG+ ++ V +
Sbjct: 290 IHVGDDCIAMKASKVFLGMKLKRSCEHTVIRNCLLDKGHGG-IVIGSEMSGGVKDMVVTQ 348
Query: 72 IHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAF-------------GACGNC 116
+ + G+ +T +GRG I +V + E+ + F G C
Sbjct: 349 CLMDHTDRGLRVKTRRGRGNTAVIDGLVFRNVEMRGVKAPFVINMFYFCDPDGHGPYVQC 408
Query: 117 G-SHPDDDFDPDALPAIDQITFKDIIGTNITIAG-NFTGIQEAPFANICLSNISLLINPG 174
+ P D++ P + +T ++I+ T+ AG F G+ E P + + ++S+ +P
Sbjct: 409 REAMPVDEYT----PKLGSLTMENIVATDAQFAGCYFDGLPEQPIERVTMRDVSITFDPN 464
Query: 175 S 175
+
Sbjct: 465 A 465
>gi|414344702|ref|YP_006986194.1| glycoside hydrolase family protein [Gluconobacter oxydans H24]
gi|411030009|gb|AFW03263.1| glycoside hydrolase family 28 [Gluconobacter oxydans H24]
Length = 477
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 22/211 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SSD+V + + IA G D I++KSG + G A +D+ I + G ++ GSE+
Sbjct: 253 SSDHVTMSNLEIATGDDNIAIKSGLTQPGQA----ASDISITQSRF--GEGHGLSIGSEL 306
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
+ G ++++ + ++L+G+ ++ + RGG I I + ++ V P
Sbjct: 307 ANGAHHIRISDVSFQNTLSGLRIKSGRDRGGDIGWISAEHLTMDHVRVPLSISDYYAGQP 366
Query: 121 DDD------FDPDA-----LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+P A P I +T D+ TN G G+ EAP + L ++ L
Sbjct: 367 GGTQQTALMTEPAAPVTSTTPHIHDVTITDMTATNAGTVGVVLGLPEAPIEGLTLRHVRL 426
Query: 170 LINPGSYNSWECSNIHGSS-ESVFPEPCPEL 199
G + S++ G S ES P +
Sbjct: 427 SARKG----LQLSHVSGRSFESTLTVQTPPV 453
>gi|442804408|ref|YP_007372557.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740258|gb|AGC67947.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 430
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C I++G D +++KSG EY Y P ++ I + G V GSEM
Sbjct: 191 SCRNVRITNCYISVGDDCVAIKSGV-EYS-KYRIPCENITITNCTMLDGHGG-VVIGSEM 247
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV-----AFGACGN 115
SG + N+ + + GI +T +GRGG ++ I +S+ + + + CG
Sbjct: 248 SGCVRNITISNCVFEGTDRGIRIKTRRGRGGVVEDIRVSNIIMKKVMCPLVMNMYYFCGK 307
Query: 116 CGSHP---DDDFDP--DALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISL 169
G P D + P + P ++ +I AG F G+ E P +I ++ +
Sbjct: 308 GGKEPIVKDKNPHPVNEGTPVFRRVHLSNISAREAGACAGFFYGLPEMPIEDISFHDVYI 367
>gi|386819253|ref|ZP_10106469.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424359|gb|EIJ38189.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 468
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 9/173 (5%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S NV I++C+ G D I++KSG ++ G P+ ++ + ++ G V GSE+S
Sbjct: 273 SKNVHIKNCLFDTGDDCIAIKSGRNDDGRRVNIPSENIVVENCEMKDGHG-GVVMGSEIS 331
Query: 62 GGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACG-NCG 117
G+ NV V + DS N I +T RGG+++ + + + E+ + AF + G
Sbjct: 332 AGVRNVYVRNCKM-DSPNLDRAIRIKTNTLRGGFVENVFVKNIEVGQVKEAFLKVNTHYG 390
Query: 118 SHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEA-PFANICLSNISL 169
+ + + D +P+I I +D+ N G +EA P NI N+ +
Sbjct: 391 IYANQ--EGDYMPSIKNIHIEDVKVDNGGKYGILVRGREALPVKNITFKNVVI 441
>gi|315497213|ref|YP_004086017.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315415225|gb|ADU11866.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 466
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 12/117 (10%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S NV IEDC+ G DA+S+KSG D PT +V +R +++ +A GSE+S
Sbjct: 266 SQNVLIEDCVFDQGDDAVSVKSGRDMDAWRLNTPTKNVVMRNCRIKNGH-QLMAVGSELS 324
Query: 62 GGISNVQVEKIHLYDSLNG-----------IEFRTTKGRGGYIKQIVISDAELYNIN 107
GGI N+ V+ H G + +T + RGGY+K I + + I
Sbjct: 325 GGIENIFVDNCHFVGDGKGDDGWAVPINNLLYVKTNERRGGYVKNIHMRNVSATKIQ 381
>gi|225872229|ref|YP_002753684.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
gi|225792218|gb|ACO32308.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
Length = 468
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V +E I++ DA+ LK+G D G+ +P D+ IR ++ + ++ GSE
Sbjct: 229 SSRHVLVEHADISVNDDALCLKAGRDSDGLRVNKPDVDIVIRNCTVRYGA-AAFTIGSET 287
Query: 61 SGGISNVQVEKIHLYDSL-NGIEFRTTKGRGGYIKQIVISDAEL------------YNIN 107
SGG NV V IH + + +G+ F++ RGG+ I I D +L +N +
Sbjct: 288 SGGFRNVDVYNIHALEHVPSGVLFKSAHTRGGWADNIRIHDFQLDGVAIPIHITMNWNPS 347
Query: 108 VAFGACGNCGSHPDDDFD------PDA--LPAIDQITFKDIIGTNITIAGNFTGIQEAPF 159
++ + H + P A LP + +I TN A + + + AP
Sbjct: 348 YSYAKIPHGLKHVPRYYRVLAKPVPPARGLPHFRNVHIWNIEATNAKRAFDVSAMPAAPL 407
Query: 160 ANICLSNISL 169
L +I +
Sbjct: 408 VRFKLDHIRI 417
>gi|340348164|ref|ZP_08671257.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433652999|ref|YP_007296853.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339607813|gb|EGQ12738.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433303532|gb|AGB29347.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 857
Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
NV I++C G D I++KSG + G + RP+ ++ IR ++ G V GSE+SGG
Sbjct: 270 NVLIQNCTFDTGDDCIAIKSGRNNDGRLWNRPSENIIIRHCKMKDGHG-GVVIGSEISGG 328
Query: 64 ISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
NV E H+ DS + + +T RGG I+ I + NV G C
Sbjct: 329 CRNVFAEDCHM-DSPHLDRVLRIKTNNCRGGVIENINMR-------NVTVGQCNEAVLRI 380
Query: 121 DDDFDP 126
+ D++P
Sbjct: 381 NLDYEP 386
>gi|253573347|ref|ZP_04850690.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
gi|251846875|gb|EES74880.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
Length = 442
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C I +G D I++K+G +E A P ++ I + G V GSEM
Sbjct: 190 SCSNVRISNCHIDVGDDCIAIKAGTEE--TAERVPCENITITNCTMIHGHGG-VVIGSEM 246
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CGN 115
SG I NV + + GI ++ +GRGG ++ I +S+ + N+ F CG
Sbjct: 247 SGNIRNVTISNCVFQHTDRGIRLKSRRGRGGIVEDIRVSNLVMENVICPFIMNLYYFCGP 306
Query: 116 CGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
G D + P + P +I F DI + A F G+ E + + I +
Sbjct: 307 RGKEKYVWDKNPYPVTEETPQFRRIHFSDITAREVHAAAGFLYGLAEQYISEVTFDQIEI 366
>gi|255531066|ref|YP_003091438.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344050|gb|ACU03376.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 554
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 22/223 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV +E +G D I +KSG D G PT +V IR + + G V GSEM
Sbjct: 282 SCKNVLVEGSTFDVGDDGICIKSGRDAEGRKRAMPTENVVIRHSTVYHAHGGFV-IGSEM 340
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
SGG N+ + + G+ F+TT+GRGG ++ I + + +I ++ + A
Sbjct: 341 SGGAKNIFISDCTFIGTDIGLRFKTTRGRGGVVENIYARNINMKDIPGEAILFDMYYAAV 400
Query: 114 ------GNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLS 165
G P + P + P + +++ A G+ E ++I L
Sbjct: 401 DPVPLTGEKRETPKVELLPVTEETPVFRKFYISNVVCDGAAKAVFIRGLPEMSISDIFLD 460
Query: 166 NISLLINPG----SYNSWECSNIHGSSESVFPEPCPELENSSS 204
N+++ G + SN+H ++ +P ++N SS
Sbjct: 461 NLTIKAKEGLDIQEAKNISLSNVHLDIKNA--KPLIYIQNGSS 501
>gi|218193956|gb|EEC76383.1| hypothetical protein OsI_13998 [Oryza sativa Indica Group]
gi|222626016|gb|EEE60148.1| hypothetical protein OsJ_13044 [Oryza sativa Japonica Group]
Length = 420
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 17/201 (8%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEM 60
S NV + DC I G D +S++ G T +H+ R++ G S+ + G +
Sbjct: 227 SKNVQVSDCTIKTGDDCVSIEDG-----------THGLHVTRLVCGPGHGISIGSLGDDN 275
Query: 61 SGG-ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGN-CGS 118
S +S++ ++ +HLY + NG +T +G GY K IV + + ++ N C S
Sbjct: 276 SRAEVSDIFIDTVHLYGTTNGARIKTWQGGSGYAKDIVFQNMVMNSVKNPIIIDQNYCDS 335
Query: 119 HPDDDFDPDALPAIDQITFKDIIGTNITIAG-NFTGIQEAPFANICLSNISL-LINPGSY 176
+ + I + FK+I GT I+ + + P +I L +I+L +++
Sbjct: 336 AKKCETQEGSAVEISNVVFKNIAGTTISKSAITLNCSKNYPCYDISLQDINLEMVDDNGA 395
Query: 177 NSWECSNIH-GSSESVFPEPC 196
C N S +V P+PC
Sbjct: 396 TGSTCQNAKWRKSGTVVPQPC 416
>gi|430834097|ref|ZP_19452106.1| polygalacturonase [Enterococcus faecium E0679]
gi|430485620|gb|ELA62520.1| polygalacturonase [Enterococcus faecium E0679]
Length = 452
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSE 59
S NV I +C I +G D I++K+G ++ Y R ++ I + G V GSE
Sbjct: 186 SCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGG-VVLGSE 241
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CG 114
MSG I N+ + ++ GI ++ +GRGG ++ I +S+ + N+ F CG
Sbjct: 242 MSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCG 301
Query: 115 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 168
G P + P + PA +I F +I N+ + F G+ E I NI
Sbjct: 302 PRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNID 361
Query: 169 L 169
+
Sbjct: 362 V 362
>gi|326790331|ref|YP_004308152.1| polygalacturonase [Clostridium lentocellum DSM 5427]
gi|326541095|gb|ADZ82954.1| Polygalacturonase [Clostridium lentocellum DSM 5427]
Length = 515
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 18/170 (10%)
Query: 13 AMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKI 72
++G D I++KSG + RP+ ++ IR L++ G V GSEMSGGI +V VE+
Sbjct: 288 SLGDDCIAIKSGKISVPVDMRRPSENIIIRNCLMEYGHGG-VVLGSEMSGGIKHVYVERC 346
Query: 73 HLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGACGNCGSHPDDD------F 124
++ G+ +T +GRG I +I I + ++ + F NC D D +
Sbjct: 347 FFRNTDRGLRIKTRRGRGNTAVIDEIYIKNIKMDGVLTPFTL--NCFYFCDPDGKTEYVW 404
Query: 125 DPDALPA------IDQITFKDIIGTNITI-AGNFTGIQEAPFANICLSNI 167
D LP I + F++I N + AG G+ E + N+
Sbjct: 405 SKDKLPVDERTPYIGTLNFENIYCENSEVCAGFIYGLPEQTIKELNFKNV 454
>gi|257889036|ref|ZP_05668689.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
gi|257825099|gb|EEV52022.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
Length = 445
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSE 59
S NV I +C I +G D I++K+G ++ Y R ++ I + G V GSE
Sbjct: 186 SCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGG-VVLGSE 241
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CG 114
MSG I N+ + ++ GI ++ +GRGG ++ I +S+ + N+ +F CG
Sbjct: 242 MSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCSFILNLYYFCG 301
Query: 115 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 168
G P + P + PA +I F +I N+ + F G+ E I NI
Sbjct: 302 PRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNID 361
Query: 169 L 169
+
Sbjct: 362 V 362
>gi|424907689|ref|ZP_18331159.1| polygalacturonase [Enterococcus faecium R497]
gi|425060672|ref|ZP_18463956.1| polygalacturonase [Enterococcus faecium 503]
gi|402930043|gb|EJX49746.1| polygalacturonase [Enterococcus faecium R497]
gi|403042383|gb|EJY53341.1| polygalacturonase [Enterococcus faecium 503]
Length = 445
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSE 59
S NV I +C I +G D I++K+G ++ Y R ++ I + G V GSE
Sbjct: 186 SCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGG-VVLGSE 241
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CG 114
MSG I N+ + ++ GI ++ +GRGG ++ I +S+ + N+ F CG
Sbjct: 242 MSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCG 301
Query: 115 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 168
G P + P + PA +I F +I N+ + F G+ E I NI
Sbjct: 302 PRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNID 361
Query: 169 L 169
+
Sbjct: 362 V 362
>gi|373469919|ref|ZP_09561077.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371763536|gb|EHO52007.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 526
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 14/182 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +NV I I++G D +++KSG + + +P ++ IR + + G SV GSE+
Sbjct: 280 SCENVLILGADISVGDDCVAIKSGKYYMALKHYKPAKNIVIRNSIFRKGHG-SVTIGSEV 338
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGACGNCGS 118
+ G+ +V+V K + G+ +T +GRG + I + + ++ + F A
Sbjct: 339 AAGVYDVRVGKCIFEGTDRGLRIKTRRGRGEKSVLDNICFENILMKDVCMPFTANMFYFC 398
Query: 119 HPDDDFD----------PDALPAIDQITFKDIIGTNIT-IAGNFTGIQEAPFANICLSNI 167
PD D + P I +I +DI N+ I G+ E P I L NI
Sbjct: 399 DPDGHSDYVQNQDKMEVNEKTPKIGKIAARDIRCENVKNIFACLYGLPEMPVEEIVLENI 458
Query: 168 SL 169
+L
Sbjct: 459 TL 460
>gi|430837653|ref|ZP_19455615.1| polygalacturonase [Enterococcus faecium E0680]
gi|430840334|ref|ZP_19458261.1| polygalacturonase [Enterococcus faecium E0688]
gi|430859274|ref|ZP_19476887.1| polygalacturonase [Enterococcus faecium E1552]
gi|430487167|gb|ELA63937.1| polygalacturonase [Enterococcus faecium E0680]
gi|430489820|gb|ELA66395.1| polygalacturonase [Enterococcus faecium E0688]
gi|430544018|gb|ELA84068.1| polygalacturonase [Enterococcus faecium E1552]
Length = 445
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSE 59
S NV I +C I +G D I++K+G ++ Y R ++ I + G V GSE
Sbjct: 186 SCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGG-VVLGSE 241
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CG 114
MSG I N+ + ++ GI ++ +GRGG ++ I +S+ + N+ F CG
Sbjct: 242 MSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCG 301
Query: 115 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 168
G P + P + PA +I F +I N+ + F G+ E I NI
Sbjct: 302 PRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNID 361
Query: 169 L 169
+
Sbjct: 362 V 362
>gi|345513296|ref|ZP_08792818.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|229437084|gb|EEO47161.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 849
Score = 60.1 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS++V IE C + D ++KSG + G+ RPT++V IR+ + +G V G+E+
Sbjct: 249 SSNDVLIEYCSLDCQDDCYTMKSGRGKDGLKVNRPTSNVVIRKSIALRGAGGIVC-GTEI 307
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA--CGNCGS 118
+GG+ NV + + F+T + RGG+++ I + E NV A C GS
Sbjct: 308 AGGVRNVYMYDCVFEGTDQAFRFKTRRPRGGFVENIYV---ERVRANVKRQALYCDMLGS 364
Query: 119 ----------HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 167
+P + P P I+ D+ T + + + + E P N N+
Sbjct: 365 ARWVGELAQRYPTREITP-LTPWFANISIHDVEITGCSTLVDVSALPEKPVKNFFFGNV 422
>gi|430854295|ref|ZP_19472011.1| polygalacturonase [Enterococcus faecium E1258]
gi|430539024|gb|ELA79287.1| polygalacturonase [Enterococcus faecium E1258]
Length = 445
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSE 59
S NV I +C I +G D I++K+G ++ Y R ++ I + G V GSE
Sbjct: 186 SCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGG-VVLGSE 241
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CG 114
MSG I N+ + ++ GI ++ +GRGG ++ I +S+ + N+ F CG
Sbjct: 242 MSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCG 301
Query: 115 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 168
G P + P + PA +I F +I N+ + F G+ E I NI
Sbjct: 302 PRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNID 361
Query: 169 L 169
+
Sbjct: 362 V 362
>gi|430860956|ref|ZP_19478551.1| polygalacturonase [Enterococcus faecium E1573]
gi|430551274|gb|ELA91043.1| polygalacturonase [Enterococcus faecium E1573]
Length = 445
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSE 59
S NV I +C I +G D I++K+G ++ Y R ++ I + G V GSE
Sbjct: 186 SCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGG-VVLGSE 241
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CG 114
MSG I N+ + ++ GI ++ +GRGG ++ I +S+ + N+ F CG
Sbjct: 242 MSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCG 301
Query: 115 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 168
G P + P + PA +I F +I N+ + F G+ E I NI
Sbjct: 302 PRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNID 361
Query: 169 L 169
+
Sbjct: 362 V 362
>gi|69244135|ref|ZP_00602671.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257880495|ref|ZP_05660148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257886384|ref|ZP_05666037.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257891474|ref|ZP_05671127.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257894583|ref|ZP_05674236.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260562495|ref|ZP_05833005.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|293559894|ref|ZP_06676406.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|293568212|ref|ZP_06679546.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|314938527|ref|ZP_07845812.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942455|ref|ZP_07849295.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314949488|ref|ZP_07852823.1| polygalacturonase [Enterococcus faecium TX0082]
gi|314952932|ref|ZP_07855899.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992201|ref|ZP_07857644.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995242|ref|ZP_07860354.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329854|ref|YP_005355738.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|389869663|ref|YP_006377086.1| pectin lyase [Enterococcus faecium DO]
gi|406581497|ref|ZP_11056639.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583788|ref|ZP_11058833.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586132|ref|ZP_11061069.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591696|ref|ZP_11065942.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936309|ref|ZP_11368176.1| pectin lyase [Enterococcus sp. GMD5E]
gi|415891706|ref|ZP_11549795.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|416141642|ref|ZP_11599435.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|424845976|ref|ZP_18270576.1| polygalacturonase [Enterococcus faecium R501]
gi|424854976|ref|ZP_18279307.1| polygalacturonase [Enterococcus faecium R499]
gi|424960548|ref|ZP_18375053.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964739|ref|ZP_18378806.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971119|ref|ZP_18384580.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974622|ref|ZP_18387847.1| polygalacturonase [Enterococcus faecium P1137]
gi|424978117|ref|ZP_18391065.1| polygalacturonase [Enterococcus faecium P1123]
gi|424981120|ref|ZP_18393872.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983707|ref|ZP_18396282.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987493|ref|ZP_18399867.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424990935|ref|ZP_18403122.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007173|ref|ZP_18418318.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014684|ref|ZP_18425349.1| polygalacturonase [Enterococcus faecium E417]
gi|425021605|ref|ZP_18431844.1| polygalacturonase [Enterococcus faecium C497]
gi|425023089|ref|ZP_18433228.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034680|ref|ZP_18439557.1| polygalacturonase [Enterococcus faecium 514]
gi|425042053|ref|ZP_18446419.1| polygalacturonase [Enterococcus faecium 511]
gi|425046647|ref|ZP_18450644.1| polygalacturonase [Enterococcus faecium 510]
gi|425047911|ref|ZP_18451842.1| polygalacturonase [Enterococcus faecium 509]
gi|425051834|ref|ZP_18455475.1| polygalacturonase [Enterococcus faecium 506]
gi|427397520|ref|ZP_18890002.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430824500|ref|ZP_19443057.1| polygalacturonase [Enterococcus faecium E0120]
gi|430832640|ref|ZP_19450680.1| polygalacturonase [Enterococcus faecium E0333]
gi|430845579|ref|ZP_19463463.1| polygalacturonase [Enterococcus faecium E1050]
gi|430848400|ref|ZP_19466219.1| polygalacturonase [Enterococcus faecium E1133]
gi|430856194|ref|ZP_19473897.1| polygalacturonase [Enterococcus faecium E1392]
gi|430868562|ref|ZP_19482856.1| polygalacturonase [Enterococcus faecium E1574]
gi|430968703|ref|ZP_19487864.1| polygalacturonase [Enterococcus faecium E1576]
gi|431017544|ref|ZP_19490421.1| polygalacturonase [Enterococcus faecium E1578]
gi|431243672|ref|ZP_19503845.1| polygalacturonase [Enterococcus faecium E1622]
gi|431261230|ref|ZP_19505727.1| polygalacturonase [Enterococcus faecium E1623]
gi|431323325|ref|ZP_19509129.1| polygalacturonase [Enterococcus faecium E1626]
gi|431388088|ref|ZP_19511694.1| polygalacturonase [Enterococcus faecium E1627]
gi|431520927|ref|ZP_19516641.1| polygalacturonase [Enterococcus faecium E1634]
gi|431565473|ref|ZP_19519835.1| polygalacturonase [Enterococcus faecium E1731]
gi|431744393|ref|ZP_19533261.1| polygalacturonase [Enterococcus faecium E2071]
gi|431747806|ref|ZP_19536575.1| polygalacturonase [Enterococcus faecium E2134]
gi|431750363|ref|ZP_19539082.1| polygalacturonase [Enterococcus faecium E2297]
gi|431755429|ref|ZP_19544078.1| polygalacturonase [Enterococcus faecium E2883]
gi|431769096|ref|ZP_19557524.1| polygalacturonase [Enterococcus faecium E1321]
gi|431771659|ref|ZP_19560039.1| polygalacturonase [Enterococcus faecium E1644]
gi|431774529|ref|ZP_19562836.1| polygalacturonase [Enterococcus faecium E2369]
gi|431780636|ref|ZP_19568809.1| polygalacturonase [Enterococcus faecium E4389]
gi|447913741|ref|YP_007395153.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|68196592|gb|EAN11018.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257814723|gb|EEV43481.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257822240|gb|EEV49370.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257827834|gb|EEV54460.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257830962|gb|EEV57569.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260073180|gb|EEW61525.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|291589112|gb|EFF20926.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|291606166|gb|EFF35588.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|313590498|gb|EFR69343.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593259|gb|EFR72104.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595004|gb|EFR73849.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598763|gb|EFR77608.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642155|gb|EFS06735.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|313644102|gb|EFS08682.1| polygalacturonase [Enterococcus faecium TX0082]
gi|364090036|gb|EHM32668.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|364093766|gb|EHM36003.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|378939548|gb|AFC64620.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|388534912|gb|AFK60104.1| pectin lyase [Enterococcus faecium DO]
gi|402919804|gb|EJX40370.1| polygalacturonase [Enterococcus faecium R501]
gi|402931909|gb|EJX51460.1| polygalacturonase [Enterococcus faecium R499]
gi|402945957|gb|EJX64277.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947330|gb|EJX65549.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955965|gb|EJX73454.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959987|gb|EJX77180.1| polygalacturonase [Enterococcus faecium P1139]
gi|402963038|gb|EJX79936.1| polygalacturonase [Enterococcus faecium P1123]
gi|402964595|gb|EJX81367.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970840|gb|EJX87153.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402974315|gb|EJX90374.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402978299|gb|EJX94052.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402995607|gb|EJY10050.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402997994|gb|EJY12279.1| polygalacturonase [Enterococcus faecium E417]
gi|403006146|gb|EJY19813.1| polygalacturonase [Enterococcus faecium C497]
gi|403010843|gb|EJY24188.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019826|gb|EJY32405.1| polygalacturonase [Enterococcus faecium 514]
gi|403023540|gb|EJY35785.1| polygalacturonase [Enterococcus faecium 510]
gi|403024463|gb|EJY36619.1| polygalacturonase [Enterococcus faecium 511]
gi|403032239|gb|EJY43807.1| polygalacturonase [Enterococcus faecium 509]
gi|403036560|gb|EJY47906.1| polygalacturonase [Enterococcus faecium 506]
gi|404452556|gb|EJZ99740.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456111|gb|EKA02868.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461640|gb|EKA07534.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467219|gb|EKA12401.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735255|gb|EKQ77169.1| pectin lyase [Enterococcus sp. GMD5E]
gi|425722196|gb|EKU85093.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430441028|gb|ELA51171.1| polygalacturonase [Enterococcus faecium E0120]
gi|430479695|gb|ELA56911.1| polygalacturonase [Enterococcus faecium E0333]
gi|430495386|gb|ELA71561.1| polygalacturonase [Enterococcus faecium E1050]
gi|430534971|gb|ELA75396.1| polygalacturonase [Enterococcus faecium E1133]
gi|430545280|gb|ELA85263.1| polygalacturonase [Enterococcus faecium E1392]
gi|430548826|gb|ELA88674.1| polygalacturonase [Enterococcus faecium E1574]
gi|430554873|gb|ELA94441.1| polygalacturonase [Enterococcus faecium E1576]
gi|430559243|gb|ELA98603.1| polygalacturonase [Enterococcus faecium E1578]
gi|430571641|gb|ELB10527.1| polygalacturonase [Enterococcus faecium E1622]
gi|430576635|gb|ELB15272.1| polygalacturonase [Enterococcus faecium E1623]
gi|430577973|gb|ELB16549.1| polygalacturonase [Enterococcus faecium E1626]
gi|430580353|gb|ELB18826.1| polygalacturonase [Enterococcus faecium E1627]
gi|430585070|gb|ELB23371.1| polygalacturonase [Enterococcus faecium E1634]
gi|430589382|gb|ELB27511.1| polygalacturonase [Enterococcus faecium E1731]
gi|430604693|gb|ELB42128.1| polygalacturonase [Enterococcus faecium E2134]
gi|430605136|gb|ELB42541.1| polygalacturonase [Enterococcus faecium E2071]
gi|430609790|gb|ELB46967.1| polygalacturonase [Enterococcus faecium E2297]
gi|430616651|gb|ELB53546.1| polygalacturonase [Enterococcus faecium E2883]
gi|430628012|gb|ELB64470.1| polygalacturonase [Enterococcus faecium E1321]
gi|430632933|gb|ELB69123.1| polygalacturonase [Enterococcus faecium E1644]
gi|430633934|gb|ELB70079.1| polygalacturonase [Enterococcus faecium E2369]
gi|430639091|gb|ELB74973.1| polygalacturonase [Enterococcus faecium E4389]
gi|445189450|gb|AGE31092.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 445
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSE 59
S NV I +C I +G D I++K+G ++ Y R ++ I + G V GSE
Sbjct: 186 SCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGG-VVLGSE 241
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CG 114
MSG I N+ + ++ GI ++ +GRGG ++ I +S+ + N+ F CG
Sbjct: 242 MSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCG 301
Query: 115 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 168
G P + P + PA +I F +I N+ + F G+ E I NI
Sbjct: 302 PRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNID 361
Query: 169 L 169
+
Sbjct: 362 V 362
>gi|160945608|ref|ZP_02092834.1| hypothetical protein FAEPRAM212_03137 [Faecalibacterium prausnitzii
M21/2]
gi|158443339|gb|EDP20344.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 518
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 22/181 (12%)
Query: 12 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 71
I +G D I++K+ G+ R IR LL G + GSEMSGG+ ++ V +
Sbjct: 290 IHVGDDCIAMKASKVFLGMKLKRSCEHTVIRNCLLDKGHGG-IVIGSEMSGGVKDMVVTQ 348
Query: 72 IHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAF-------------GACGNC 116
+ + G+ +T +GRG I +V + E+ + F G C
Sbjct: 349 CLMDHTDRGLRVKTRRGRGNTAVIDGLVFRNVEMRGVKAPFVINMFYFCDPDGHGPYVQC 408
Query: 117 GSH-PDDDFDPDALPAIDQITFKDIIGTNITIAG-NFTGIQEAPFANICLSNISLLINPG 174
P D++ P + +T ++I+ T+ AG F G+ E P + + ++S+ +P
Sbjct: 409 REPLPVDEY----TPKLGSLTMENIVATDAQFAGCYFDGLPEQPIERVTMRDVSITFDPN 464
Query: 175 S 175
+
Sbjct: 465 A 465
>gi|115456093|ref|NP_001051647.1| Os03g0808000 [Oryza sativa Japonica Group]
gi|30103016|gb|AAP21429.1| putative polygalacturonase precursor [Oryza sativa Japonica Group]
gi|41469668|gb|AAS07380.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|108711664|gb|ABF99459.1| Polygalacturonase family protein, expressed [Oryza sativa Japonica
Group]
gi|113550118|dbj|BAF13561.1| Os03g0808000 [Oryza sativa Japonica Group]
Length = 444
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 17/201 (8%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEM 60
S NV + DC I G D +S++ G T +H+ R++ G S+ + G +
Sbjct: 251 SKNVQVSDCTIKTGDDCVSIEDG-----------THGLHVTRLVCGPGHGISIGSLGDDN 299
Query: 61 SGG-ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGN-CGS 118
S +S++ ++ +HLY + NG +T +G GY K IV + + ++ N C S
Sbjct: 300 SRAEVSDIFIDTVHLYGTTNGARIKTWQGGSGYAKDIVFQNMVMNSVKNPIIIDQNYCDS 359
Query: 119 HPDDDFDPDALPAIDQITFKDIIGTNITIAG-NFTGIQEAPFANICLSNISL-LINPGSY 176
+ + I + FK+I GT I+ + + P +I L +I+L +++
Sbjct: 360 AKKCETQEGSAVEISNVVFKNIAGTTISKSAITLNCSKNYPCYDISLQDINLEMVDDNGA 419
Query: 177 NSWECSNIH-GSSESVFPEPC 196
C N S +V P+PC
Sbjct: 420 TGSTCQNAKWRKSGTVVPQPC 440
>gi|431472772|ref|ZP_19514500.1| polygalacturonase [Enterococcus faecium E1630]
gi|431761402|ref|ZP_19549976.1| polygalacturonase [Enterococcus faecium E3346]
gi|430583557|gb|ELB21919.1| polygalacturonase [Enterococcus faecium E1630]
gi|430621543|gb|ELB58304.1| polygalacturonase [Enterococcus faecium E3346]
Length = 445
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSE 59
S NV I +C I +G D I++K+G ++ Y R ++ I + G V GSE
Sbjct: 186 SCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGG-VVLGSE 241
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CG 114
MSG I N+ + ++ GI ++ +GRGG ++ I +S+ + N+ F CG
Sbjct: 242 MSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCG 301
Query: 115 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 168
G P + P + PA +I F +I N+ + F G+ E I NI
Sbjct: 302 PRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNID 361
Query: 169 L 169
+
Sbjct: 362 V 362
>gi|315608643|ref|ZP_07883624.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315249682|gb|EFU29690.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 873
Score = 60.1 bits (144), Expect = 7e-07, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+ +NV I++C G D I++KSG + G +G+P+ ++ IR ++ G V GSE+
Sbjct: 286 ACENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCKMEDGHG-GVVIGSEI 344
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG 117
SGG NV E ++ DS + +T RGG I+ I + NV G C
Sbjct: 345 SGGCENVYAEDCYM-DSPELERVLRIKTNNCRGGLIQNINMR-------NVKVGQCKEAV 396
Query: 118 SHPDDDFDP-DALPAIDQITFKDIIGTNITIAGNFTGI 154
+ D++P +A Q T +++ N+T + G+
Sbjct: 397 LKINLDYEPREACYRGFQPTVRNVNMENVTCGKSEYGV 434
>gi|295102197|emb|CBK99742.1| Endopolygalacturonase [Faecalibacterium prausnitzii L2-6]
Length = 518
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 14/175 (8%)
Query: 12 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 71
I +G D I++K+ G+ + IR LL G + GSEMSGG+ ++ V +
Sbjct: 290 IHVGDDCIAMKASKVFLGMKLKKSCEHTVIRNCLLDKGHGG-IVIGSEMSGGVKDMVVTQ 348
Query: 72 IHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGA-----CGNCGSHP---- 120
+ + G+ +T +GRG I +V + E+ + F C G P
Sbjct: 349 CLMDHTDRGLRVKTRRGRGNTAVIDGLVFRNVEMRGVKAPFVINMFYFCDPDGHSPYVQC 408
Query: 121 DDDFDPDAL-PAIDQITFKDIIGTNITIAG-NFTGIQEAPFANICLSNISLLINP 173
+ D P + +T +DI+ T+ AG F G+ E P + + N+++ +P
Sbjct: 409 REALPVDEYTPKLGTLTMEDIVATDAQFAGCYFDGLPEQPIEGVSMKNVTITFDP 463
>gi|288926468|ref|ZP_06420388.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288336759|gb|EFC75125.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 843
Score = 60.1 bits (144), Expect = 7e-07, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+ +NV I++C G D I++KSG + G +G+P+ ++ IR ++ G V GSE+
Sbjct: 256 ACENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCKMEDGHG-GVVIGSEI 314
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG 117
SGG NV E ++ DS + +T RGG I+ I + NV G C
Sbjct: 315 SGGCENVYAEDCYM-DSPELERVLRIKTNNCRGGLIQNINMR-------NVKVGQCKEAV 366
Query: 118 SHPDDDFDP-DALPAIDQITFKDIIGTNITIAGNFTGI 154
+ D++P +A Q T +++ N+T + G+
Sbjct: 367 LKINLDYEPREACYRGFQPTVRNVNMENVTCGKSEYGV 404
>gi|300770985|ref|ZP_07080862.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300762258|gb|EFK59077.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 481
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 86/216 (39%), Gaps = 28/216 (12%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS + I++ I D +KSG D G+ RPT V I + + G + FGSE
Sbjct: 252 SSKWIRIQNADIDCNDDNFCIKSGRDWDGLRVNRPTEYVLITDCISRKGDGL-ITFGSET 310
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG--- 117
SGG+ ++ + + + GI ++ + RGG ++ I++ + ++ ++ AF N
Sbjct: 311 SGGMRHIIARNLKAHGTKVGIRLKSARNRGGVVEDILLENIQMDSVRTAFEVTPNWNPSY 370
Query: 118 ---------------SHPDDDFDP-----DALPAIDQITFKDIIGTNITIAGNFTGIQEA 157
H P +P I K++ A N G+QE
Sbjct: 371 SYSKLPAGYDINKVPEHWKKMVTPVEPASKGIPTFQNIQIKNVFVKFAQRAINVDGLQEN 430
Query: 158 PFANICLSNISLLINPGSY----NSWECSNIHGSSE 189
P L N+++ +W+ N+ +++
Sbjct: 431 PLQKFSLENVAITAKTAGVIRHAKNWQLKNVKVTAQ 466
>gi|261207232|ref|ZP_05921921.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289567172|ref|ZP_06447562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|294614352|ref|ZP_06694269.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430850281|ref|ZP_19468044.1| polygalacturonase [Enterococcus faecium E1185]
gi|260078860|gb|EEW66562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289161031|gb|EFD08941.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|291592824|gb|EFF24416.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430535906|gb|ELA76297.1| polygalacturonase [Enterococcus faecium E1185]
Length = 445
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSE 59
S NV I +C I +G D I++K+G ++ Y R ++ I + G V GSE
Sbjct: 186 SCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGG-VVLGSE 241
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CG 114
MSG I N+ + ++ GI ++ +GRGG ++ I +S+ + N+ F CG
Sbjct: 242 MSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCG 301
Query: 115 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 168
G P + P + PA +I F +I N+ + F G+ E I NI
Sbjct: 302 PRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNID 361
Query: 169 L 169
+
Sbjct: 362 V 362
>gi|390453172|ref|ZP_10238700.1| polygalacturonase [Paenibacillus peoriae KCTC 3763]
Length = 453
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C I +G D I++K+G ++ ++ I + G V GSEM
Sbjct: 190 SCSNVRISNCNIDVGDDCIAIKAGTEDTQERIA--CENITITNCTMVHGHGG-VVLGSEM 246
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF--GACGNCGS 118
SG I NV + + GI ++ +GRGG I+ I +S+ + + F CG
Sbjct: 247 SGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRVSNIVMEEVICPFILNLYYFCGP 306
Query: 119 HPDD----DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
D D +P D P+ +I F DI + A F G+ E A I SNI +
Sbjct: 307 RGKDKYVWDKNPYPVTDETPSFRRIHFSDITARQVHAAAGFLYGLAEQYIAEITFSNIDI 366
>gi|390959335|ref|YP_006423092.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390414253|gb|AFL89757.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 468
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 21/188 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V ++ I + DA+ LK+G D G+ RPT +V +R L+++ + ++V FGSE
Sbjct: 218 SSHDVLVQHADIDVNDDALCLKAGRDSDGLRVNRPTYNVVLRDSLIRTGA-AAVTFGSET 276
Query: 61 SGGISNVQVEKI-HLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGN---- 115
SGG N++ + L NG+ ++ K RGG+ + + + D L + N
Sbjct: 277 SGGFRNIEAYNLTALRGVTNGVLIKSAKVRGGFGENLRVHDLHLDGVKTPIKVTLNWNPA 336
Query: 116 -------CGSHPDDDFDPDALPAIDQIT-------FKDIIGTNITIAGNFTGIQEAPFAN 161
G+ P P +P ++ F D+ NI T I A + N
Sbjct: 337 YSYTSLPAGTDP-KTVPPYWIPLTTKVPEAQGLAHFHDVHFWNIDAKDAETAIDIAAYPN 395
Query: 162 ICLSNISL 169
L N +
Sbjct: 396 ATLDNFQI 403
>gi|304396605|ref|ZP_07378486.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304356114|gb|EFM20480.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 430
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V +E C ++ D I +KSG GR D+ IR L SG + GSE
Sbjct: 204 SSQLVRVESCTVSCNDDNICVKSGRGAEAQQLGRTARDIIIRDCTLLKGSG--ITLGSET 261
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
SGGI NV +E + G ++ + RGG+IK IV+ ++ ++ F
Sbjct: 262 SGGIENVIIEHNRFSGTGVGFRIKSARNRGGWIKNIVVRHLKMEDVCYPF 311
>gi|265754967|ref|ZP_06089881.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263234578|gb|EEZ20157.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 849
Score = 59.7 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS++V IE C + D ++KSG + G+ RPT++V IR+ + +G V G+E+
Sbjct: 249 SSNDVLIEYCSLDCQDDCYTMKSGRGKDGLKVNRPTSNVVIRKSIALRGAGGIVC-GTEI 307
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA--CGNCGS 118
+GG+ NV + + F+T + RGG+++ I + E NV A C GS
Sbjct: 308 AGGVRNVYMYDCVFEGTDQAFRFKTRRPRGGFVENIYV---ERVRANVKRQALYCDMLGS 364
Query: 119 ----------HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 167
+P + P P I+ D+ T + + + + E P N N+
Sbjct: 365 ARWVGELAQRYPAREITP-LTPWFANISIHDVEITGCSTLVDVSALPEKPVKNFFFGNV 422
>gi|212693767|ref|ZP_03301895.1| hypothetical protein BACDOR_03288 [Bacteroides dorei DSM 17855]
gi|423232657|ref|ZP_17219057.1| hypothetical protein HMPREF1063_04877 [Bacteroides dorei
CL02T00C15]
gi|423242091|ref|ZP_17223201.1| hypothetical protein HMPREF1065_03824 [Bacteroides dorei
CL03T12C01]
gi|423247347|ref|ZP_17228397.1| hypothetical protein HMPREF1064_04603 [Bacteroides dorei
CL02T12C06]
gi|212663656|gb|EEB24230.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|392623750|gb|EIY17852.1| hypothetical protein HMPREF1063_04877 [Bacteroides dorei
CL02T00C15]
gi|392632755|gb|EIY26712.1| hypothetical protein HMPREF1064_04603 [Bacteroides dorei
CL02T12C06]
gi|392639835|gb|EIY33643.1| hypothetical protein HMPREF1065_03824 [Bacteroides dorei
CL03T12C01]
Length = 849
Score = 59.7 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS++V IE C + D ++KSG + G+ RPT++V IR+ + +G V G+E+
Sbjct: 249 SSNDVLIEYCSLDCQDDCYTMKSGRGKDGLKVNRPTSNVVIRKSIALRGAGGIVC-GTEI 307
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA--CGNCGS 118
+GG+ NV + + F+T + RGG+++ I + E NV A C GS
Sbjct: 308 AGGVRNVYMYDCVFEGTDQAFRFKTRRPRGGFVENIYV---ERVRANVKRQALYCDMLGS 364
Query: 119 ----------HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 167
+P + P P I+ D+ T + + + + E P N N+
Sbjct: 365 ARWVGELAQRYPAREITP-LTPWFANISIHDVEITGCSTLVDVSALPEKPVKNFFFGNV 422
>gi|294617477|ref|ZP_06697109.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
gi|291596284|gb|EFF27545.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
Length = 363
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSE 59
S NV I +C I +G D I++K+G ++ Y R ++ I + G V GSE
Sbjct: 186 SCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGG-VVLGSE 241
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CG 114
MSG I N+ + ++ GI ++ +GRGG ++ I +S+ + N+ F CG
Sbjct: 242 MSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCG 301
Query: 115 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 168
G P + P + PA +I F +I N+ + F G+ E I NI
Sbjct: 302 PRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNID 361
Query: 169 L 169
+
Sbjct: 362 V 362
>gi|388256014|ref|ZP_10133195.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
gi|387939714|gb|EIK46264.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
Length = 505
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 19/174 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I++C+ G D I++KSG + G PT ++ I ++ G V GSE+
Sbjct: 311 SCKNVVIKNCLFDTGDDCIAIKSGRNADGRRLNTPTENIVISHCKMREGHG-GVVIGSEI 369
Query: 61 SGGISNVQVEKIHLY--DSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS 118
SGG+ NV VE + + GI +T RGG I+ I D + + A
Sbjct: 370 SGGVRNVFVEHCEMSSPNLDRGIRIKTNSVRGGVIENFFIRDITIGEVTTAIVI------ 423
Query: 119 HPDDDFDPDA------LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
DFD + P + I +++ N G + +P N+ L+N
Sbjct: 424 ----DFDYEEGDAGKFTPTVRNIDIRNLHCENAKHVFQVRGYKRSPIQNLHLTN 473
>gi|357054504|ref|ZP_09115588.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
gi|355384476|gb|EHG31541.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
Length = 522
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 18/184 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V I ++G D I++KSG G Y P+ ++ IRR ++ GS V GSEM
Sbjct: 281 SCKDVEIAGVCFSVGDDCIAVKSGKIYMGSTYKCPSKNISIRRCCMRDGHGS-VTIGSEM 339
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGACGNCGS 118
+GG+ ++ V+ + G+ +T +GRG + +IV + ++ F NC
Sbjct: 340 AGGVKDLTVKDCMFLHTDRGLRIKTRRGRGKDAVVDKIVFEHIRMDHVMTPFVI--NCFY 397
Query: 119 HPDDD------FDPDALPAIDQ------ITFKDIIGTNITIAGNFT-GIQEAPFANICLS 165
D D +ALP D+ + F+DI N +A + G+ E + +
Sbjct: 398 FCDPDGHSEYVRTKEALPVDDKTPFIKSLCFRDIEAENCHVAAAYMYGLPEQRIGRVEME 457
Query: 166 NISL 169
+ +
Sbjct: 458 RVRV 461
>gi|430821816|ref|ZP_19440403.1| polygalacturonase [Enterococcus faecium E0045]
gi|430830077|ref|ZP_19448143.1| polygalacturonase [Enterococcus faecium E0269]
gi|430921162|ref|ZP_19485329.1| polygalacturonase [Enterococcus faecium E1575]
gi|431703882|ref|ZP_19525108.1| polygalacturonase [Enterococcus faecium E1904]
gi|431766532|ref|ZP_19555009.1| polygalacturonase [Enterococcus faecium E4215]
gi|430438088|gb|ELA48576.1| polygalacturonase [Enterococcus faecium E0045]
gi|430479132|gb|ELA56406.1| polygalacturonase [Enterococcus faecium E0269]
gi|430554055|gb|ELA93727.1| polygalacturonase [Enterococcus faecium E1575]
gi|430596728|gb|ELB34544.1| polygalacturonase [Enterococcus faecium E1904]
gi|430626092|gb|ELB62680.1| polygalacturonase [Enterococcus faecium E4215]
Length = 445
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSE 59
S NV I +C I +G D I++K+G ++ Y R ++ I + G V GSE
Sbjct: 186 SCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGG-VVLGSE 241
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CG 114
MSG I N+ + ++ GI ++ +GRGG ++ I +S+ + N+ F CG
Sbjct: 242 MSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCG 301
Query: 115 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 168
G P + P + PA +I F +I N+ + F G+ E I NI
Sbjct: 302 PRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNID 361
Query: 169 L 169
+
Sbjct: 362 V 362
>gi|402307012|ref|ZP_10826044.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
gi|400379233|gb|EJP32078.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
Length = 853
Score = 59.7 bits (143), Expect = 9e-07, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+ +NV I++C G D I++KSG + G +G+P+ ++ IR ++ G V GSE+
Sbjct: 266 ACENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCKMEDGHG-GVVIGSEI 324
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG 117
SGG NV E ++ DS + +T RGG I+ I + NV G C
Sbjct: 325 SGGCENVYAEDCYM-DSPELERVLRIKTNNCRGGLIQNINMR-------NVKVGQCKEAV 376
Query: 118 SHPDDDFDP-DALPAIDQITFKDIIGTNITIAGNFTGI 154
+ D++P +A Q T +++ N+T + G+
Sbjct: 377 LKINLDYEPREACYRGFQPTVRNVNMENVTCGKSEYGV 414
>gi|383642336|ref|ZP_09954742.1| glycoside hydrolase family 28 [Sphingomonas elodea ATCC 31461]
Length = 489
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 19/184 (10%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR--RVLLQSSSGSSVAFGSE 59
S NV IEDC+ G DA+S+KSG D P +V +R RVL + +A GSE
Sbjct: 269 SQNVLIEDCVFDQGDDAVSVKSGRDMDAWRLATPCRNVVVRNCRVL---NGHQLMAVGSE 325
Query: 60 MSGGISNVQVEKIHLYDSLNG-----------IEFRTTKGRGGYIKQIVISDAELYNINV 108
+SGGI N+ V+ H G + +T + RGGY++ + +S +
Sbjct: 326 LSGGIENIWVDDCHFVGDGRGGDDHAVPINNLLYVKTNERRGGYVRNVHMSRVTATTLAG 385
Query: 109 AFGACGNCGSHPDDDFDP---DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLS 165
+ A + P L AI+++ D+ G ++ P ++ LS
Sbjct: 386 SVLAVETDVLYQWRTLLPTYVRRLTAIERLRVSDVHVQQAQSVAVIKGERDLPIQDVRLS 445
Query: 166 NISL 169
+ +
Sbjct: 446 RVRV 449
>gi|326799725|ref|YP_004317544.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550489|gb|ADZ78874.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 528
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 21/182 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKS--GWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGS 58
SS NV IE C + G D +++K+ GWD G+ RPT +V +R L + G + GS
Sbjct: 277 SSKNVLIEYCTLQTGDDCLAMKAGRGWD--GLRVNRPTENVVVRYCLAEKGHG-GITIGS 333
Query: 59 EMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVA-----FGAC 113
E +G I + V + NGI F+T + RGG +Q+ L A G+
Sbjct: 334 ETAGMIRKLYVHDCVFNNEGNGIRFKTRRPRGGGGEQLFYDRIRLRVGETALRWDMLGSA 393
Query: 114 GNCGSHPDDDFDPDALPAIDQIT--FKDIIGTNITI--AGNFT---GIQEAPFANICLSN 166
+ G+ D + ++++ F+DI +N+ + A +F GI EAP + +
Sbjct: 394 VHVGAAADRSQKVE----LNELAPHFRDIQISNLIVEDASHFVRIDGIPEAPLEKVEIRQ 449
Query: 167 IS 168
+
Sbjct: 450 VR 451
>gi|227550311|ref|ZP_03980360.1| pectin lyase [Enterococcus faecium TX1330]
gi|257897632|ref|ZP_05677285.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|293379031|ref|ZP_06625184.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|424764556|ref|ZP_18191976.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431758788|ref|ZP_19547411.1| polygalacturonase [Enterococcus faecium E3083]
gi|227180571|gb|EEI61543.1| pectin lyase [Enterococcus faecium TX1330]
gi|257834197|gb|EEV60618.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|292642310|gb|EFF60467.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|402419039|gb|EJV51323.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430616603|gb|ELB53499.1| polygalacturonase [Enterococcus faecium E3083]
Length = 445
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSE 59
S NV I +C I +G D I++K+G ++ Y R ++ I + G V GSE
Sbjct: 186 SCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGG-VVLGSE 241
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CG 114
MSG I N+ + ++ GI ++ +GRGG ++ I +S+ + N+ F CG
Sbjct: 242 MSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCG 301
Query: 115 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 168
G P + P + PA +I F +I N+ + F G+ E I NI
Sbjct: 302 PRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNID 361
Query: 169 L 169
+
Sbjct: 362 V 362
>gi|431753622|ref|ZP_19542291.1| polygalacturonase [Enterococcus faecium E2620]
gi|430611655|gb|ELB48732.1| polygalacturonase [Enterococcus faecium E2620]
Length = 445
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSE 59
S NV I +C I +G D I++K+G ++ Y R ++ I + G V GSE
Sbjct: 186 SCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGG-VVLGSE 241
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CG 114
MSG I N+ + ++ GI ++ +GRGG ++ I +S+ + N+ F CG
Sbjct: 242 MSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCG 301
Query: 115 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 168
G P + P + PA +I F +I N+ + F G+ E I NI
Sbjct: 302 PRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNID 361
Query: 169 L 169
+
Sbjct: 362 V 362
>gi|425055000|ref|ZP_18458495.1| polygalacturonase [Enterococcus faecium 505]
gi|403034850|gb|EJY46272.1| polygalacturonase [Enterococcus faecium 505]
Length = 445
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSE 59
S NV I +C I +G D I++K+G ++ Y R ++ I + G V GSE
Sbjct: 186 SCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGG-VVLGSE 241
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CG 114
MSG I N+ + ++ GI ++ +GRGG ++ I +S+ + N+ F CG
Sbjct: 242 MSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCG 301
Query: 115 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 168
G P + P + PA +I F +I N+ + F G+ E I NI
Sbjct: 302 PRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNID 361
Query: 169 L 169
+
Sbjct: 362 V 362
>gi|431050714|ref|ZP_19493383.1| polygalacturonase [Enterococcus faecium E1590]
gi|431764029|ref|ZP_19552575.1| polygalacturonase [Enterococcus faecium E3548]
gi|430560252|gb|ELA99556.1| polygalacturonase [Enterococcus faecium E1590]
gi|430621333|gb|ELB58100.1| polygalacturonase [Enterococcus faecium E3548]
Length = 445
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSE 59
S NV I +C I +G D I++K+G ++ Y R ++ I + G V GSE
Sbjct: 186 SCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGG-VVLGSE 241
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CG 114
MSG I N+ + ++ GI ++ +GRGG ++ I +S+ + N+ F CG
Sbjct: 242 MSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCG 301
Query: 115 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 168
G P + P + PA +I F +I N+ + F G+ E I NI
Sbjct: 302 PRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNID 361
Query: 169 L 169
+
Sbjct: 362 V 362
>gi|375309358|ref|ZP_09774639.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
gi|375078667|gb|EHS56894.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
Length = 504
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 78/180 (43%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C I +G D I++K+G ++ ++ I + G V GSEM
Sbjct: 241 SCSNVRISNCNIDVGDDCIAIKAGTEDTQERIA--CENITITNCTMVHGHGG-VVLGSEM 297
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF--GACGNCGS 118
SG I NV + + GI ++ +GRGG I+ I +S+ + + F CG
Sbjct: 298 SGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRVSNIVMEEVICPFILNLYYFCGP 357
Query: 119 HPDD----DFDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
D D +P D P +I F DI + A F G+ E A I SNI +
Sbjct: 358 RGKDKYVWDKNPYPVTDETPCFRRIHFADITARQVHAAAGFLYGLAEQYIAEITFSNIDI 417
>gi|298383818|ref|ZP_06993379.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
gi|298263422|gb|EFI06285.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
Length = 516
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 11/176 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S+ NV IE C + G D ++KSG E GI +P+ ++ IR L + G V GSE
Sbjct: 269 STRNVLIEYCSLDCGDDCFTMKSGRGEDGIRVNKPSENIVIRYCLAKRGWGGIVC-GSET 327
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF--------GA 112
+ I N+ V + +G+ F+T + RGG + + + AF
Sbjct: 328 AAMIRNLYVHDCVFTGTKSGLRFKTRRSRGGGGENLTFERIRMNLTGAAFWWDMLGEEKH 387
Query: 113 CGNCGSH-PDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 167
G+ P P P+ IT +DII + + + GI E P N + N+
Sbjct: 388 VGDLAKRLPARPITP-LTPSFKNITIRDIIVESASYFIDLNGIPETPAENNLIENL 442
>gi|308185704|ref|YP_003929835.1| polygalacturonase [Pantoea vagans C9-1]
gi|308056214|gb|ADO08386.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 352
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V +E C ++ D I +KSG GR D+ IR L SG + GSE
Sbjct: 204 SSQLVRVEGCTVSCNDDNICVKSGRGAEAQQLGRTARDIIIRDCTLLKGSG--ITLGSET 261
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
SGGI NV +E + G ++ + RGG+IK IV+ ++ ++ F
Sbjct: 262 SGGIENVIIEHNRFSGTGVGFRIKSARNRGGWIKNIVVRHLKMEDVCYPF 311
>gi|224540752|ref|ZP_03681291.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|423224671|ref|ZP_17211139.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224517619|gb|EEF86724.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|392635111|gb|EIY29017.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 467
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG ++ G +G P+ ++ +R ++ G V GSE+
Sbjct: 269 SCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWGVPSENIIVRGCYMKKGHG-GVVIGSEI 327
Query: 61 SGGISNVQVE--KIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
SGG N+ VE K+ D I +T+ RGG I+ + + NV G C
Sbjct: 328 SGGYRNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVR-------NVTVGQC 375
>gi|293571108|ref|ZP_06682148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|431739345|ref|ZP_19528280.1| polygalacturonase [Enterococcus faecium E1972]
gi|291608838|gb|EFF38120.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|430596073|gb|ELB33930.1| polygalacturonase [Enterococcus faecium E1972]
Length = 445
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSE 59
S NV I +C I +G D I++K+G ++ Y R ++ I + G V GSE
Sbjct: 186 SCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGG-VVLGSE 241
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CG 114
MSG I N+ + ++ GI ++ +GRGG ++ I +S+ + N+ F CG
Sbjct: 242 MSGSIRNITISNCIFQETDRGIRLKSRRGRGGNVEDIRVSNIVMDNVMCPFILNLYYFCG 301
Query: 115 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 168
G P + P + PA +I F +I N+ + F G+ E I NI
Sbjct: 302 PRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNID 361
Query: 169 L 169
+
Sbjct: 362 V 362
>gi|383115308|ref|ZP_09936066.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
gi|313695275|gb|EFS32110.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
Length = 496
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ IE+C+I D I LKSG D G+ RPT +V IR + +G + GSE
Sbjct: 256 SSTNILIENCMIDCNDDNICLKSGRDTDGLRVNRPTENVVIRNCTTRKGAG-LITCGSET 314
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA 112
SGGI N+ + + + + ++ RGG I+ I I+ + ++ A
Sbjct: 315 SGGIRNILGHDLTAQGTWSVLRLKSAMNRGGIIENIYITRVKADSVRNVLAA 366
>gi|430842911|ref|ZP_19460818.1| polygalacturonase [Enterococcus faecium E1007]
gi|431064168|ref|ZP_19493515.1| polygalacturonase [Enterococcus faecium E1604]
gi|431131393|ref|ZP_19498944.1| polygalacturonase [Enterococcus faecium E1613]
gi|431602171|ref|ZP_19522547.1| polygalacturonase [Enterococcus faecium E1861]
gi|431742395|ref|ZP_19531288.1| polygalacturonase [Enterococcus faecium E2039]
gi|430492622|gb|ELA68986.1| polygalacturonase [Enterococcus faecium E1007]
gi|430565953|gb|ELB05076.1| polygalacturonase [Enterococcus faecium E1613]
gi|430568809|gb|ELB07839.1| polygalacturonase [Enterococcus faecium E1604]
gi|430589939|gb|ELB28031.1| polygalacturonase [Enterococcus faecium E1861]
gi|430600153|gb|ELB37811.1| polygalacturonase [Enterococcus faecium E2039]
Length = 445
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSE 59
S NV I +C I +G D I++K+G ++ Y R ++ I + G V GSE
Sbjct: 186 SCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGG-VVLGSE 241
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CG 114
MSG I N+ + ++ GI ++ +GRGG ++ I +S+ + N+ F CG
Sbjct: 242 MSGSIRNITISNCIFQETDRGIRLKSRRGRGGNVEDIRVSNIVMDNVMCPFILNLYYFCG 301
Query: 115 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 168
G P + P + PA +I F +I N+ + F G+ E I NI
Sbjct: 302 PRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNID 361
Query: 169 L 169
+
Sbjct: 362 V 362
>gi|319644236|ref|ZP_07998749.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345519913|ref|ZP_08799321.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836217|gb|EET16526.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317384227|gb|EFV65199.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 468
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IE+CI G D I++KSG + G + P+ ++ +R ++ G V GSE+
Sbjct: 269 SSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHG-GVVVGSEI 327
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAEL 103
SGG N+ VE + DS N I +T RGG I+ I + + E+
Sbjct: 328 SGGYKNLFVENCKM-DSPNLERVIRIKTNNCRGGVIENIYVRNVEV 372
>gi|196228361|ref|ZP_03127228.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
gi|196227764|gb|EDY22267.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
Length = 469
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 16/191 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+S +V I C I G D I++K G G+A PT +V + + G V+ GSE
Sbjct: 267 NSRDVLIRRCTIDTGDDNIAVKGG----GVA-NEPTENVTVTDC--KFLHGHGVSIGSET 319
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVA-----FGACGN 115
G+ N V++ ++ + ++ + RGG ++ ++ D + N+ A F
Sbjct: 320 EAGVRNFLVQRCAFENTGTALRIKSDRTRGGVVENVLYRDITMKNVETAITIFLFYDDKK 379
Query: 116 CGSHPDDDFDPDALPAIDQITFKDIIGTNIT-IAGNFTGIQEAPFANICLSNISLLINPG 174
+HP+ P + ITF+ I+ T AG G+ E+P +++ ++ + G
Sbjct: 380 AAAHPELAPVTKQTPMVRNITFQKIVCHGTTRKAGELVGLPESPISDVVFDDVHI---DG 436
Query: 175 SYNSWECSNIH 185
+ + +IH
Sbjct: 437 AAAPFTQQDIH 447
>gi|150004301|ref|YP_001299045.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|294776888|ref|ZP_06742351.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149932725|gb|ABR39423.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
gi|294449364|gb|EFG17901.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 468
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IE+CI G D I++KSG + G + P+ ++ +R ++ G V GSE+
Sbjct: 269 SSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHG-GVVVGSEI 327
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAEL 103
SGG N+ VE + DS N I +T RGG I+ I + + E+
Sbjct: 328 SGGYKNLFVENCKM-DSPNLERVIRIKTNNCRGGVIENIYVRNVEV 372
>gi|423312702|ref|ZP_17290639.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
gi|392687436|gb|EIY80729.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
Length = 468
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IE+CI G D I++KSG + G + P+ ++ +R ++ G V GSE+
Sbjct: 269 SSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHG-GVVVGSEI 327
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAEL 103
SGG N+ VE + DS N I +T RGG I+ I + + E+
Sbjct: 328 SGGYKNLFVENCKM-DSPNLERVIRIKTNNCRGGVIENIYVRNVEV 372
>gi|399032129|ref|ZP_10731768.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069540|gb|EJL60890.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 479
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 29/183 (15%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N+ I++C+ G D I++KSG D G P+ ++ ++ + G V GSE+S
Sbjct: 279 SQNIIIKNCVFNTGDDCIAIKSGRDADGRRVAIPSKNIIVQNCKMIDGHG-GVVIGSEIS 337
Query: 62 GGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAE-------LYNINVAFG 111
G++NV VE + DS N I +T RGG I+ + + + E + +N+ +
Sbjct: 338 AGVNNVFVENC-IMDSPNLDRAIRIKTNSKRGGVIEDVYVRNLEVGTVKECVLKLNMFYN 396
Query: 112 ACG-NCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNF----TGIQEAPFANICLSN 166
G GS +P I I+ +++ + AG + G +E+P N+ L N
Sbjct: 397 VYGSQTGSF---------IPVIRNISLENV---TVKKAGKYGVWAEGYKESPVENVTLKN 444
Query: 167 ISL 169
+ +
Sbjct: 445 VVI 447
>gi|189466414|ref|ZP_03015199.1| hypothetical protein BACINT_02789 [Bacteroides intestinalis DSM
17393]
gi|189434678|gb|EDV03663.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 467
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG ++ G +G P+ ++ +R ++ G V GSE+
Sbjct: 269 SCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRGCYMKKGHG-GVVIGSEI 327
Query: 61 SGGISNVQVE--KIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
SGG N+ VE K+ D I +T+ RGG I+ + + NV G C
Sbjct: 328 SGGYRNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVR-------NVTVGQC 375
>gi|427386399|ref|ZP_18882596.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
gi|425726439|gb|EKU89304.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
Length = 467
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG ++ G +G P+ ++ +R ++ G V GSE+
Sbjct: 269 SCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRGCYMKKGHG-GVVIGSEI 327
Query: 61 SGGISNVQVE--KIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
SGG N+ VE K+ D I +T+ RGG I+ + + NV G C
Sbjct: 328 SGGYRNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVR-------NVTVGQC 375
>gi|440760701|ref|ZP_20939804.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425454|gb|ELP23188.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 430
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+S V +E C ++ D I +KSG GR D+ IR L SG + GSE
Sbjct: 204 TSQLVRVESCTVSCNDDNICVKSGRGAEAQQLGRTARDIIIRDCTLLKGSG--ITLGSET 261
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
SGGI NV +E + G ++ + RGG+IK IV+ ++ ++ F
Sbjct: 262 SGGIENVIIEHNRFSGTGVGFRIKSARNRGGWIKNIVVRHLKMEDVCYPF 311
>gi|390956451|ref|YP_006420208.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390411369|gb|AFL86873.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 423
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 80/175 (45%), Gaps = 11/175 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ I I G D I+LKSG E G P V+I + + G SV GSE+
Sbjct: 215 SSKNIEISYVDIDTGDDDIALKSGLVERDPKIG-PVEHVYIHDSIFRHGHGLSV--GSEL 271
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
+GGIS+V+VE I + ++ G+ ++ + RG I + + ++ + P
Sbjct: 272 AGGISDVRVENIVMENTDAGVRIKSNRTRGNDIHDLHYKNIQMTGVGQPIQITEYYPKWP 331
Query: 121 DDDFDPDALPAIDQIT--FKDIIGTNITIAGN----FTGIQEAPFANICLSNISL 169
D A+D T F DI NIT G GI E P N+ L+ IS+
Sbjct: 332 --AAGTDTAKAVDAHTPRFHDISLENITATGAKDAIIIGIPEYPIQNLTLTKISI 384
>gi|357051036|ref|ZP_09112232.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
gi|355380661|gb|EHG27797.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
Length = 437
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C+I +G D I++KSG +E ++ I + G V GSEM
Sbjct: 187 SCKNVRISNCLIDVGDDCIAIKSGTEETKERVS--CENITISNCQMLHGHGG-VVLGSEM 243
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CGN 115
SG I NV + D+ GI ++ +GRGG I+ I +++ + N+ F CG
Sbjct: 244 SGDIRNVTISNCIFQDTDRGIRLKSRRGRGGVIEDIRVNNLIMDNVICPFTLNLYYFCGP 303
Query: 116 CGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
G D + P + P +I F +I N+ A F G+ E ++I +++
Sbjct: 304 KGKEKYVWDKNPYPISEETPQFRRIHFVNISARNVHAAAGFIYGLSEQFISDISFHEVAI 363
>gi|336314135|ref|ZP_08569056.1| endopolygalacturonase [Rheinheimera sp. A13L]
gi|335881648|gb|EGM79526.1| endopolygalacturonase [Rheinheimera sp. A13L]
Length = 479
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 17/176 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S V IE+C+ G D I+LKSG + G P V I+ L++S G V GSE+
Sbjct: 279 SCQRVLIENCLFDTGDDCIALKSGRNAEGRRLATPIQQVVIQDCLMKSGHG-GVVIGSEI 337
Query: 61 SGGISNVQVEKIHLY--DSLNGIEFRTTKGRGGYIKQIVISDAELYNINVA-----FGAC 113
SGG + + + + G+ +T RGG I+QI + D E+ + A +
Sbjct: 338 SGGAKQIFARRCRMSSPNLERGLRIKTNSVRGGLIEQIAVDDIEIGEVKDAIVINFYYEE 397
Query: 114 GNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
G+ G+ LP + + + A G+ A + I +S++S
Sbjct: 398 GDAGNF---------LPEVKDLKISNFRVKKAQRAFEIRGLPRAGISGIQMSDVSF 444
>gi|257869845|ref|ZP_05649498.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
gi|257804009|gb|EEV32831.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
Length = 437
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C+I +G D I++KSG +E ++ I + G V GSEM
Sbjct: 187 SCKNVRISNCLIDVGDDCIAIKSGTEETKERVS--CENITISNCQMLHGHGG-VVLGSEM 243
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CGN 115
SG I NV + D+ GI ++ +GRGG I+ I +++ + N+ F CG
Sbjct: 244 SGDIRNVTISNCIFQDTDRGIRLKSRRGRGGIIEDIRVNNLIMDNVICPFTLNLYYFCGP 303
Query: 116 CGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
G D + P + P +I F +I N+ A F G+ E ++I +++
Sbjct: 304 KGKEKYVWDKNPYPISEETPQFRRIHFVNISARNVHAAAGFIYGLSEQFISDISFHEVAI 363
>gi|189462646|ref|ZP_03011431.1| hypothetical protein BACCOP_03343 [Bacteroides coprocola DSM 17136]
gi|189430807|gb|EDU99791.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 482
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 28/181 (15%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG +E G + RP+ ++ +R +++ G V GSE+
Sbjct: 284 SCKNVLIENCRFDTGDDCIAIKSGRNEDGRKWNRPSENIIVRNCEMKNGHG-GVVIGSEI 342
Query: 61 SGGISNVQVEKIHL----YDSLNGIEFRTTKGRGGYIKQIVISDAE-------LYNINVA 109
SGG N+ VE + D + I +T RGG ++ + + + + + IN+
Sbjct: 343 SGGYRNLYVENCVMDSPQLDRV--IRIKTNDCRGGIVENVFVRNIKVGQCHEAVLKINLL 400
Query: 110 FGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI-CLSNIS 168
+ + NC A P I +++ NIT + GI N C+ NIS
Sbjct: 401 YESKENCNR---------AFPPI----VRNVHLKNITCENSQYGIYAVGLPNKDCVYNIS 447
Query: 169 L 169
+
Sbjct: 448 V 448
>gi|320106925|ref|YP_004182515.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319925446|gb|ADV82521.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 460
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V ++ IA+ DA+ LK+G D G+ RPT D+ +R +++ + + V GSE
Sbjct: 230 SSKKVLVQHADIAVNDDALCLKAGRDSDGLRVNRPTEDIVLRDSVIRDGA-AGVTIGSET 288
Query: 61 SGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG-- 117
SGG N++ + + + GI F++ + RGG+ + + D + ++ V N
Sbjct: 289 SGGFRNIEAYGLTVLKQVPVGILFKSARTRGGWGENLRFHDITMTDVPVVLRVNMNWNPS 348
Query: 118 ---SH-PD--DDFDP------DALPAIDQIT-FKDIIGTNITIAGNFTGIQEAPFANICL 164
+H P+ D+ P +PA I F+D+ NI G T + + + + L
Sbjct: 349 YSYAHIPETIKDYPPYWTVLSTEVPAEKGIARFRDVHIWNIKATGAKTAFEVSAYPQVPL 408
Query: 165 SNISL 169
L
Sbjct: 409 DRFVL 413
>gi|423232717|ref|ZP_17219117.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|423247409|ref|ZP_17228459.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
gi|392623156|gb|EIY17261.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|392632549|gb|EIY26508.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
Length = 468
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IE+CI G D I++KSG + G + P+ ++ +R ++ G V GSE+
Sbjct: 269 SSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHG-GVVVGSEI 327
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAEL 103
SGG N+ VE + DS N I +T RGG I+ I + + E+
Sbjct: 328 SGGYKNLFVENCKM-DSPNLERVIRIKTNNCRGGVIENIYVRNIEV 372
>gi|239628555|ref|ZP_04671586.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518701|gb|EEQ58567.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 716
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 8/172 (4%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S + V I +C G D ISLKSG D G G P +V I G +A GSEM
Sbjct: 246 SCNGVHIRNCRFDTGDDCISLKSGRDRDGRMAGIPCENVLIENNEFADGHG-GIALGSEM 304
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG 117
SGGI V + + S N + +T RGG ++ ++++D+ + +++ GA +
Sbjct: 305 SGGIRRVLAVN-NRFSSPNLTYALRLKTNARRGGRVEDVILADSVMDHVH---GAAVHGT 360
Query: 118 SHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+D + LP IT ++I+ E P + L NI +
Sbjct: 361 MLYEDGRNGSDLPEFHNITIENIVAHGGDYGIFLEAFDEVPVTGLTLRNIRI 412
>gi|212693826|ref|ZP_03301954.1| hypothetical protein BACDOR_03347 [Bacteroides dorei DSM 17855]
gi|237709356|ref|ZP_04539837.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265755031|ref|ZP_06089945.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|423242200|ref|ZP_17223310.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
gi|212663715|gb|EEB24289.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229456741|gb|EEO62462.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234642|gb|EEZ20221.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|392639944|gb|EIY33752.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
Length = 468
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IE+CI G D I++KSG + G + P+ ++ +R ++ G V GSE+
Sbjct: 269 SSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHG-GVVVGSEI 327
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAEL 103
SGG N+ VE + DS N I +T RGG I+ I + + E+
Sbjct: 328 SGGYKNLFVENCKM-DSPNLERVIRIKTNNCRGGVIENIYVRNIEV 372
>gi|345513234|ref|ZP_08792756.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229437148|gb|EEO47225.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 468
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV IE+CI G D I++KSG + G + P+ ++ +R ++ G V GSE+
Sbjct: 269 SSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHG-GVVVGSEI 327
Query: 61 SGGISNVQVEKIHLYDSLNG---IEFRTTKGRGGYIKQIVISDAEL 103
SGG N+ VE + DS N I +T RGG I+ I + + E+
Sbjct: 328 SGGYKNLFVENCKM-DSPNLERIIRIKTNNCRGGVIENIYVRNIEV 372
>gi|298480639|ref|ZP_06998835.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298273073|gb|EFI14638.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG +E G + P+ ++ +R ++++ G V GSE+
Sbjct: 271 SCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMKNGHG-GVVIGSEI 329
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
SGG N+ VE + DS N I +T+ RGG I+ I + NV G C
Sbjct: 330 SGGYRNLFVEDCQM-DSPNLDRVIRIKTSTCRGGLIENIFVR-------NVTVGQC 377
>gi|266623900|ref|ZP_06116835.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864287|gb|EFC96585.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 537
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 21/175 (12%)
Query: 12 IAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEK 71
++G D I+LKSG G Y P+ ++ +R+ + + G+ V GSEM+ G+ +V V+
Sbjct: 290 FSLGDDCIALKSGKYYMGHKYKVPSQNIEVRQCCMNNGHGA-VTIGSEMAAGVKHVHVKD 348
Query: 72 IHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV----------AFGACGNCGSHPD 121
+ G+ +T +GRG K V+ D NI + +F C + H D
Sbjct: 349 CLFLHTDRGLRIKTRRGRG---KDAVVEDICFENIRMDHVLTPFVLNSFYNCCDPDCHSD 405
Query: 122 DDFDPDAL------PAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
L P++ Q+ F++I N +AG F G+ E + ++++
Sbjct: 406 YVKCKSPLPVDERTPSVKQMVFRNIEAHNCHVAGAFLYGLPEKKVDYVEFDHVTI 460
>gi|224537921|ref|ZP_03678460.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520465|gb|EEF89570.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
Length = 964
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV + +G DA+ +KSG +E G G P +V + + G V GSEM
Sbjct: 272 SCQNVLVVQSTFDVGDDAVCIKSGRNEAGRLRGMPAKNVVVEDCTVFHGHGGFVV-GSEM 330
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAEL-------------YNIN 107
SGG+ ++ V ++ G+ F++ + RGG++ I I + + Y
Sbjct: 331 SGGVHSILVRNCKFLNTDTGLRFKSNRQRGGHVSDIYIQNVYMCGIAAEPILFDMYYQGK 390
Query: 108 VAFGACGNCGSHPDDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLS 165
A A + + P + P D I D+ A F G+ E ++I L
Sbjct: 391 SAVEAMEDALKGSMETIPPVTEKTPKFDHIHISDVHCYQAGRALLFDGLPEQNISDITLR 450
Query: 166 NISLLINPGSYNSWECSNIH 185
N+++ G S EC+ +
Sbjct: 451 NVTIHAVEGGVFS-ECTAVR 469
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +NV IE C G D +++KSG + G + P+ ++ +R +++ + VA GSE+
Sbjct: 767 SCENVLIESCDFNNGDDCVAIKSGKNNDGRTWNLPSRNIIVRNCIMRDGH-AGVAVGSEI 825
Query: 61 SGGISNVQVE 70
SG +V V
Sbjct: 826 SGSCYDVWVR 835
>gi|326797905|ref|YP_004315724.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548669|gb|ADZ77054.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 485
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 17/173 (9%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
NV I DC G D I++KSG DE G GRP + I +++ G V GSE++GG
Sbjct: 289 NVWIRDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCVMKDGHG-GVVIGSEIAGG 347
Query: 64 ISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
N+ + DS N + +T+ RGG I+ + + + ++ A C P
Sbjct: 348 AKNIYAINCEM-DSPNLDRVLRIKTSSSRGGIIENVFMKNVQVGTFKEAAVKCNMFYEKP 406
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNF----TGIQEAPFANICLSNISL 169
+ +P I I +++ N+ G + Q++P N+ + N +L
Sbjct: 407 GNH-----IPTIRNIWVENL---NVEKGGQYALMVAAYQQSPVTNLRMINCNL 451
>gi|300715765|ref|YP_003740568.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
gi|299061601|emb|CAX58716.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
Length = 791
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 19/198 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ + + I G D I++KSG A + D+ I +++ G SV GSE
Sbjct: 578 SSRNITVSNMDIHTGDDNIAIKSGLVNGTAAASK---DITIEDSVMRDGHGISV--GSET 632
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-------NVAFGAC 113
+ GI V + + ++ NG+ ++ + RG I ++ S + N+ N G
Sbjct: 633 ANGIGKVTINHVTFLNTENGVRIKSARDRGENIGPLIASHLTMTNVVTPVLVTNSYSGQA 692
Query: 114 GNCGSHPDDDFDPDAL----PAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
G G + A+ P + I D++ T + A F+G+ E+P ++ L+NI +
Sbjct: 693 GAQGHTLTQPIETAAVTASTPKMKGIHISDLMATKASYAMIFSGLPESPVEDVTLNNIRI 752
Query: 170 LINPG---SYNSWECSNI 184
G Y S E NI
Sbjct: 753 DAQYGVQARYVSGEGKNI 770
>gi|239628552|ref|ZP_04671583.1| glycoside hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518698|gb|EEQ58564.1| glycoside hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 695
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 10/185 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS+ V IED G D I++KSG + G A P+ ++ IR + G + GSE+
Sbjct: 235 SSNYVLIEDNYFDTGDDCIAIKSGRNADGRATNTPSQNIIIRNNIFADGHG-GITIGSEV 293
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG 117
SGG++NV + + ++S N + F+T RGG I+ I + + + +++ A +
Sbjct: 294 SGGVNNVFADN-NQFNSPNLKYALRFKTNAVRGGIIENIYLRNTTIQSVS---DAVVHAT 349
Query: 118 SHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL--LINPGS 175
++ D +P IT +++ T ++ P + + N+ L + NP
Sbjct: 350 MLYEEGRHGDYMPQFRNITIENLKSTGGDFGIFVEAFEDVPVTGLVMRNVELNEVENPLR 409
Query: 176 YNSWE 180
+WE
Sbjct: 410 AVNWE 414
>gi|242032587|ref|XP_002463688.1| hypothetical protein SORBIDRAFT_01g004230 [Sorghum bicolor]
gi|241917542|gb|EER90686.1| hypothetical protein SORBIDRAFT_01g004230 [Sorghum bicolor]
Length = 436
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 38/211 (18%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEM 60
S NV + +C I G D +S+++G T ++H+ +V+ G S+ + G +
Sbjct: 244 SKNVRVTNCKIKTGDDCMSIENG-----------THNLHVSKVVCGPGHGISIGSLGDDN 292
Query: 61 SGG-ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
S +S + ++ + LY + NG +T +G GY K I + +Y + +
Sbjct: 293 SRAEVSGITIDSVQLYGTTNGARIKTYQGGSGYAKDITFQNMIMYGVK-----------N 341
Query: 120 P---DDDFDPDALPAIDQ--------ITFKDIIGTNITI-AGNFTGIQEAPFANICLSNI 167
P D ++ A P +Q + FK+I GT IT A + P I L NI
Sbjct: 342 PIIIDQNYCDKATPCAEQRSAVRVSNVVFKNIRGTTITKHAIKMNCSKNVPCQGITLKNI 401
Query: 168 SLLINPGSYN-SWECSNIHGSSES-VFPEPC 196
+ + G N C N V P+PC
Sbjct: 402 DMKLKGGKGNIDSTCQNAKWRKSGFVHPQPC 432
>gi|237721278|ref|ZP_04551759.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
gi|229449074|gb|EEO54865.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
Length = 380
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG +E G + P+ ++ +R ++++ G V GSE+
Sbjct: 182 SCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEI 240
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
SGG N+ VE + DS N I +T+ RGG I+ + + NV G C
Sbjct: 241 SGGYRNLFVEDCRM-DSPNLDRVIRIKTSTCRGGLIENVFVR-------NVTVGQC 288
>gi|407684685|ref|YP_006799859.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'English Channel 673']
gi|407246296|gb|AFT75482.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'English Channel 673']
Length = 476
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 16/174 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V ED G D I +KSG D G G P+TD+ R L G + GSEM
Sbjct: 273 SSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNNDLGGEDG--IGLGSEM 330
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI V E L++ + F++ RGG ++ + I +E+ + F N S+
Sbjct: 331 SGGIKRVFFENNILHEGDSAYRFKSNLDRGGRVEMVRIRGSEVASFKHLFWFQLNYPSNL 390
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQ-----EAPFANICLSNISL 169
+F PA T+ DII ++T+ T ++ AP N+ +I +
Sbjct: 391 HGNF-----PA----TYTDIIIEDLTVENVGTVLEIHAPDAAPVHNVKFKDIKI 435
>gi|281419728|ref|ZP_06250727.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
gi|281406257|gb|EFB36937.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
Length = 873
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+ +NV I++CI G D I++KSG + G + +P+ ++ IR ++ G V GSE+
Sbjct: 270 ACENVLIQNCIFHTGDDCIAIKSGRNNDGRLWNKPSKNIIIRNCRMEDGHG-GVVIGSEI 328
Query: 61 SGGISNVQVEKIHLYDSLNG---IEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG 117
SGG NV E + DS + + +T RGG I+ I + V G C
Sbjct: 329 SGGCENVYAENCEM-DSPHLERILRIKTNNCRGGLIQNIHMR-------KVTVGQCKEAV 380
Query: 118 SHPDDDFDPDAL------PAIDQITFKDI 140
+ D++P P + ++ +D+
Sbjct: 381 LKINLDYEPREACYRGFEPTVRNVSMEDV 409
>gi|146301992|ref|YP_001196583.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156410|gb|ABQ07264.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 475
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N+ I++C G D I++K+G D G P+ ++ ++ + G V GSE+S
Sbjct: 279 SQNIVIKNCTFNTGDDCIAIKAGRDADGRRVAIPSKNIIVQNCKMIDGHG-GVVIGSEIS 337
Query: 62 GGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNIN---VAFGACGN 115
G++NV VE + DS N I +T RGG I+ + + + E+ + + N
Sbjct: 338 AGVNNVFVENC-VMDSPNLDRAIRIKTNSRRGGIIENVFVRNLEVGTVKECVLKLNMFYN 396
Query: 116 CGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFT----GIQEAPFANICLSNISL 169
+F +P I I +++ N+ G ++ G +E+P NI L N+ +
Sbjct: 397 VYGSQTGNF----IPVIRNINLENV---NVKNGGKYSIWAEGYKESPVENITLKNVKI 447
>gi|82524094|emb|CAJ19131.1| putative endopolygalacturonase [unidentified microorganism]
Length = 448
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 76/176 (43%), Gaps = 19/176 (10%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S NV IED G D +++KSG D G P+ ++ IR + +V GSEMS
Sbjct: 244 SRNVLIEDVHFNNGDDNVAIKSGRDHDGRGTACPSENIIIRNCHFKGL--HAVVLGSEMS 301
Query: 62 GGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIKQIVISDAE------LYNINVAFGACG 114
GI NV VE G+ +T RGG+I+ I + E L+ I +G
Sbjct: 302 AGIQNVYVENCDYAGYCKRGLYIKTNPDRGGFIRNISFKNCEFDEVEDLFYITSMYG--- 358
Query: 115 NCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAG-NFTGIQEAPFANICLSNISL 169
G D+ F D I+ IT ++I G G + P NI NI++
Sbjct: 359 --GEGQDNTFFTD----IENITVENIQCRKARAGGLVLQGTKAKPLRNIQFRNITI 408
>gi|257883307|ref|ZP_05662960.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|294622157|ref|ZP_06701229.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|424791201|ref|ZP_18217679.1| polygalacturonase [Enterococcus faecium V689]
gi|424796708|ref|ZP_18222399.1| polygalacturonase [Enterococcus faecium S447]
gi|424949492|ref|ZP_18365160.1| polygalacturonase [Enterococcus faecium R496]
gi|424953665|ref|ZP_18368614.1| polygalacturonase [Enterococcus faecium R494]
gi|424956671|ref|ZP_18371436.1| polygalacturonase [Enterococcus faecium R446]
gi|424968083|ref|ZP_18381741.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994459|ref|ZP_18406396.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998609|ref|ZP_18410283.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001105|ref|ZP_18412635.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005198|ref|ZP_18416463.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011663|ref|ZP_18422546.1| polygalacturonase [Enterococcus faecium E422]
gi|425017819|ref|ZP_18428304.1| polygalacturonase [Enterococcus faecium C621]
gi|425032259|ref|ZP_18437327.1| polygalacturonase [Enterococcus faecium 515]
gi|425039369|ref|ZP_18443912.1| polygalacturonase [Enterococcus faecium 513]
gi|431777897|ref|ZP_19566138.1| polygalacturonase [Enterococcus faecium E2560]
gi|431783614|ref|ZP_19571712.1| polygalacturonase [Enterococcus faecium E6012]
gi|431786798|ref|ZP_19574796.1| polygalacturonase [Enterococcus faecium E6045]
gi|257818965|gb|EEV46293.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|291598326|gb|EFF29415.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|402919867|gb|EJX40428.1| polygalacturonase [Enterococcus faecium V689]
gi|402922635|gb|EJX42996.1| polygalacturonase [Enterococcus faecium S447]
gi|402934197|gb|EJX53567.1| polygalacturonase [Enterococcus faecium R496]
gi|402938569|gb|EJX57565.1| polygalacturonase [Enterococcus faecium R494]
gi|402945367|gb|EJX63722.1| polygalacturonase [Enterococcus faecium R446]
gi|402952945|gb|EJX70709.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980034|gb|EJX95667.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982456|gb|EJX97919.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987170|gb|EJY02259.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987432|gb|EJY02495.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995999|gb|EJY10409.1| polygalacturonase [Enterococcus faecium E422]
gi|403003645|gb|EJY17529.1| polygalacturonase [Enterococcus faecium C621]
gi|403013568|gb|EJY26654.1| polygalacturonase [Enterococcus faecium 515]
gi|403016115|gb|EJY28950.1| polygalacturonase [Enterococcus faecium 513]
gi|430638501|gb|ELB74432.1| polygalacturonase [Enterococcus faecium E2560]
gi|430644798|gb|ELB80379.1| polygalacturonase [Enterococcus faecium E6012]
gi|430644949|gb|ELB80513.1| polygalacturonase [Enterococcus faecium E6045]
Length = 445
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 18/182 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSE 59
S NV I +C I +G D I++K+G ++ Y R ++ I + G V GSE
Sbjct: 186 SCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGG-VVLGSE 241
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CG 114
MSG I N+ + ++ GI ++ +GRGG ++ I +S+ + N+ F CG
Sbjct: 242 MSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCG 301
Query: 115 NCGSHPDDDFDPDALP------AIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNI 167
G P ++ A P A +I F +I N+ + F G+ E I NI
Sbjct: 302 PRGKEP-YVWEKKAYPIDERTSAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNI 360
Query: 168 SL 169
+
Sbjct: 361 DV 362
>gi|325568852|ref|ZP_08145145.1| exo-poly-alpha-D-galacturonosidase [Enterococcus casseliflavus ATCC
12755]
gi|325157890|gb|EGC70046.1| exo-poly-alpha-D-galacturonosidase [Enterococcus casseliflavus ATCC
12755]
Length = 417
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S + V I++ I+ D IS+K+G +A R + I+ Q GS +A GSE
Sbjct: 190 SCEEVTIQNAYISCNDDNISIKAGRGAEALAQQRSCRKITIKDC--QLGYGSGIAIGSET 247
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI ++++K+ + G ++ RGG+I+++ SD + ++ F N +P
Sbjct: 248 SGGIEEIKIQKVVFEQTGAGFRIKSANNRGGFIRKVTASDLTMKDVGFPFLLQTNW--YP 305
Query: 121 DDDFDPDALPA 131
D + P+ LPA
Sbjct: 306 DYSY-PE-LPA 314
>gi|332685997|ref|YP_004455771.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
gi|332370006|dbj|BAK20962.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
Length = 442
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 13/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N+ I +C I +G D I++KSG ++ + ++ I + G+ V GSEM
Sbjct: 192 SCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKSA-CENITISNCTMVHGHGA-VVLGSEM 249
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF--GACGNCGS 118
S I NV + + GI +T +GRGG ++ I +S + ++ F A CG
Sbjct: 250 SRNIRNVTISNCVFQQTDRGIRMKTRRGRGGVVENITVSTIVMEDVLCPFVINAYYFCGP 309
Query: 119 HPDDDFDPDA--------LPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
+ + D P I F +I+ + A F G+ E P ++ +NI +
Sbjct: 310 KGKEKYVWDKNPYPITKETPCFRSIHFSNIVAKKVRAAEGFIYGLPEMPVQDVSFTNIQI 369
>gi|299148506|ref|ZP_07041568.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|423288903|ref|ZP_17267754.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
gi|298513267|gb|EFI37154.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|392668993|gb|EIY62485.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
Length = 469
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG +E G + P+ ++ +R ++++ G V GSE+
Sbjct: 271 SCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEI 329
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
SGG N+ VE + DS N I +T+ RGG I+ + + NV G C
Sbjct: 330 SGGYRNLFVEDCRM-DSPNLDRVIRIKTSTCRGGLIENVFVR-------NVTVGQC 377
>gi|420263796|ref|ZP_14766432.1| exo-poly-alpha-D-galacturonosidase [Enterococcus sp. C1]
gi|394769238|gb|EJF49101.1| exo-poly-alpha-D-galacturonosidase [Enterococcus sp. C1]
Length = 417
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S + V I++ I+ D IS+K+G +A R + I+ Q GS +A GSE
Sbjct: 190 SCEEVTIQNAYISCNDDNISIKAGRGAEALAQQRSCRKITIKDC--QLGYGSGIAIGSET 247
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI ++++K+ + G ++ RGG+I+++ SD + ++ F N +P
Sbjct: 248 SGGIEEIKIQKVVFEQTGAGFRIKSANNRGGFIRKVTASDLTMKDVGFPFLLQTNW--YP 305
Query: 121 DDDFDPDALPA 131
D + P+ LPA
Sbjct: 306 DYSY-PE-LPA 314
>gi|160887001|ref|ZP_02068004.1| hypothetical protein BACOVA_05015 [Bacteroides ovatus ATCC 8483]
gi|293369359|ref|ZP_06615944.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|156107412|gb|EDO09157.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|292635526|gb|EFF54033.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 469
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG +E G + P+ ++ +R ++++ G V GSE+
Sbjct: 271 SCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMKNGHG-GVVIGSEI 329
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
SGG N+ VE + DS N I +T+ RGG I+ + Y NV G C
Sbjct: 330 SGGYRNLFVEDCRM-DSPNLDRVIRIKTSTCRGGLIENV-------YVRNVTVGQC 377
>gi|333897861|ref|YP_004471735.1| polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113126|gb|AEF18063.1| Polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 518
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 77/181 (42%), Gaps = 16/181 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V I ++G D I++KSG P+ ++ IR L++ G+ V GSEM
Sbjct: 280 SCKDVLIVGTRFSVGDDCIAIKSGKLSVSQKLPMPSENLIIRNCLMEYGHGA-VVIGSEM 338
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAF-------- 110
SGG+ NV VE + GI +T +GRG G I +I S+ + + F
Sbjct: 339 SGGVKNVHVENCIFRKTDRGIRIKTRRGRGKTGVIDEIHASNIRMEGVLTPFTINSFYFC 398
Query: 111 ---GACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITI-AGNFTGIQEAPFANICLSN 166
G S D D P + I KDI + + AG G+ E + + N
Sbjct: 399 DADGKTEYVWSKEKLPVD-DRTPYVGNIYLKDITCIDTQVAAGYMYGLPERKIERVDMEN 457
Query: 167 I 167
I
Sbjct: 458 I 458
>gi|336414764|ref|ZP_08595108.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
gi|335942134|gb|EGN03982.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
Length = 469
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG +E G + P+ ++ +R ++++ G V GSE+
Sbjct: 271 SCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEI 329
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
SGG N+ VE + DS N I +T+ RGG I+ + + NV G C
Sbjct: 330 SGGYRNLFVEDCRM-DSPNLDRVIRIKTSTCRGGLIENVFVR-------NVTVGQC 377
>gi|224536305|ref|ZP_03676844.1| hypothetical protein BACCELL_01177, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522067|gb|EEF91172.1| hypothetical protein BACCELL_01177 [Bacteroides cellulosilyticus
DSM 14838]
Length = 434
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I + +G D I LKSG DE G GR +V + + G V GSEM
Sbjct: 285 SCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCTVFKGHGGFVV-GSEM 343
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI 106
SGG+ NV V + G+ F++ +GRGG ++ I I + + +I
Sbjct: 344 SGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAMMDI 389
>gi|260642167|ref|ZP_05414737.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260623411|gb|EEX46282.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 469
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG +E G + P+ ++ +R ++++ G V GSE+
Sbjct: 271 SCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEI 329
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
SGG N+ VE + DS N I +T+ RGG I+ + Y NV G C
Sbjct: 330 SGGYRNLFVEDCRM-DSPNLDRVIRIKTSTCRGGLIENV-------YVRNVTVGQC 377
>gi|295086754|emb|CBK68277.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 459
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG +E G + P+ ++ +R ++++ G V GSE+
Sbjct: 261 SCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEI 319
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
SGG N+ VE + DS N I +T+ RGG I+ + Y NV G C
Sbjct: 320 SGGYRNLFVEDCRM-DSPNLDRVIRIKTSTCRGGLIENV-------YVRNVTVGQC 367
>gi|89098529|ref|ZP_01171412.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
gi|89086774|gb|EAR65892.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
Length = 443
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWD--EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGS 58
S NV I +C I +G D I++KSG + E +A ++ I + G+ V FGS
Sbjct: 188 SCRNVRISNCHIDVGDDCIAIKSGTEDTEERVA----CENITITNCTMVHGHGA-VVFGS 242
Query: 59 EMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF--GACGNC 116
EMSG I NV + D+ GI F++ +GRGG ++ + + + + + F C
Sbjct: 243 EMSGDIRNVTISNCVFQDTDRGIRFKSRRGRGGVVEDVRVDNIVMEGVICPFIINLYYFC 302
Query: 117 GSHPDDDFDPDA--------LPAIDQITFKDIIGTNITI-AGNFTGIQEAPFANICLSNI 167
G D + D P ++ F +I N+ AG G+ E +I S I
Sbjct: 303 GPRGKDQYVWDKNPYPVTAETPMFRRLHFANITARNVHASAGYIYGLAEQYATDITFSQI 362
Query: 168 SL 169
+
Sbjct: 363 DI 364
>gi|420264265|ref|ZP_14766898.1| polygalacturonase [Enterococcus sp. C1]
gi|394768641|gb|EJF48547.1| polygalacturonase [Enterococcus sp. C1]
Length = 438
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C I +G D I++KSG ++ ++ I + G+ V GSEM
Sbjct: 188 SCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCHMLHGHGA-VVLGSEM 244
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CGN 115
SG I NV + D+ GI ++ +GRGG I+ I +++ + N+ F CG
Sbjct: 245 SGDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGP 304
Query: 116 CGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
G D + P + P +I F +I N+ A F G+ E ++I +I++
Sbjct: 305 KGKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQDIAV 364
>gi|423294951|ref|ZP_17273078.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
gi|392674531|gb|EIY67977.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
Length = 469
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG +E G + P+ ++ +R ++++ G V GSE+
Sbjct: 271 SCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEI 329
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
SGG N+ VE + DS N I +T+ RGG I+ + Y NV G C
Sbjct: 330 SGGYRNLFVEDCRM-DSPNLDRVIRIKTSTCRGGLIENV-------YVRNVTVGQC 377
>gi|336406856|ref|ZP_08587502.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
gi|335948529|gb|EGN10233.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
Length = 469
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG +E G + P+ ++ +R ++++ G V GSE+
Sbjct: 271 SCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEI 329
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
SGG N+ VE + DS N I +T+ RGG I+ + Y NV G C
Sbjct: 330 SGGYRNLFVEDCRM-DSPNLDRVIRIKTSTCRGGLIENV-------YVRNVTVGQC 377
>gi|298482142|ref|ZP_07000330.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271699|gb|EFI13272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG +E G + P+ ++ +R ++++ G V GSE+
Sbjct: 271 SCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEI 329
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
SGG N+ VE + DS N I +T+ RGG I+ + Y NV G C
Sbjct: 330 SGGYRNLFVEDCRM-DSPNLDRVIRIKTSTCRGGLIENV-------YVRNVTVGQC 377
>gi|257876852|ref|ZP_05656505.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
gi|257811018|gb|EEV39838.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
Length = 438
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C I +G D I++KSG ++ ++ I + G+ V GSEM
Sbjct: 188 SCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCHMLHGHGA-VVLGSEM 244
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CGN 115
SG I NV + D+ GI ++ +GRGG I+ I +++ + N+ F CG
Sbjct: 245 SGDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGP 304
Query: 116 CGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
G D + P + P +I F +I N+ A F G+ E ++I +I++
Sbjct: 305 KGKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQDIAV 364
>gi|419957067|ref|ZP_14473133.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
gi|388607225|gb|EIM36429.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
Length = 430
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S + V IE CI++ D I +KSG R D+ IR L + GS + GSE
Sbjct: 204 SCEQVRIERCIVSCNDDNICIKSGRGREAAQKARTARDIVIRGCTL--NKGSGITLGSET 261
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN 107
SGGI V +E + G ++ + RGG+I+ I + + L ++
Sbjct: 262 SGGIERVLIEDNAFNGTGVGFRIKSARNRGGFIRDITVQNLRLTDVR 308
>gi|257867957|ref|ZP_05647610.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257874287|ref|ZP_05653940.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
gi|257802040|gb|EEV30943.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257808451|gb|EEV37273.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
Length = 438
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C I +G D I++KSG ++ ++ I + G+ V GSEM
Sbjct: 188 SCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCHMLHGHGA-VVLGSEM 244
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CGN 115
SG I NV + D+ GI ++ +GRGG I+ I +++ + N+ F CG
Sbjct: 245 SGDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGP 304
Query: 116 CGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
G D + P + P +I F +I N+ A F G+ E ++I +I++
Sbjct: 305 KGKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQDIAV 364
>gi|383114434|ref|ZP_09935198.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
gi|313693859|gb|EFS30694.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
Length = 469
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG +E G + P+ ++ +R ++++ G V GSE+
Sbjct: 271 SCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHG-GVVIGSEI 329
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
SGG N+ VE + DS N I +T+ RGG I+ + + NV G C
Sbjct: 330 SGGYRNLFVEDCRM-DSPNLDRVIRIKTSTCRGGLIENVYVR-------NVTVGQC 377
>gi|403252174|ref|ZP_10918484.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
gi|402812187|gb|EJX26666.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
Length = 446
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 5 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR-RVLLQSSSGSSVAFGSEMSGG 63
+ IE C G D++ +KSG D G G P+ + +R +++ +S + GSEMSGG
Sbjct: 247 MLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGG 306
Query: 64 ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISD-------AELYNINVAFGACGNC 116
+ NV + + +T RGGY++ I D E+ IN+ +
Sbjct: 307 VRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAMNVSEEVIRINLRY------ 360
Query: 117 GSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
D+ + + LP + + K++ T A G++ +I +S+
Sbjct: 361 -----DNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISD 405
>gi|300728229|ref|ZP_07061597.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774464|gb|EFI71088.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 856
Score = 57.4 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 12/116 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+ +NV I++ + G D I++KSG + G +G+P+ ++ IR ++ G V GSE+
Sbjct: 267 ACENVIIQNTLFHTGDDCIAIKSGRNNDGRFWGKPSKNIIIRNCKMEDGHG-GVVIGSEI 325
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
SGG NV E ++ DS N + +T RGG I+ I + NV G C
Sbjct: 326 SGGCENVYAENCYM-DSPNLERVLRIKTNNCRGGLIQNINMR-------NVKVGQC 373
>gi|304317802|ref|YP_003852947.1| glycoside hydrolase family protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779304|gb|ADL69863.1| glycoside hydrolase family 28 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 519
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 24/187 (12%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V I ++G D I++KSG + +++IR L++ G+ V GSEM
Sbjct: 280 SCKDVVILGTRFSVGDDCIAIKSGKLATSRKLPVSSENLYIRNCLMEYGHGA-VVIGSEM 338
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAEL------YNINVAFGA 112
SGG+ NV V++ + GI +T +GRG G I +I S+ ++ + IN +F
Sbjct: 339 SGGVKNVHVDRCVFRKTDRGIRIKTRRGRGSTGIIDEIHASNIKMDKVLTPFTIN-SFYF 397
Query: 113 CGNCGSH---------PDDDFDPDALPAIDQITFKDIIGTNITI-AGNFTGIQEAPFANI 162
C G P D D P I I KDI + + AG G+ E +
Sbjct: 398 CDEDGKTEYVWSKEKLPVD----DRTPYIGNIYLKDITCNDTQVAAGYMYGLPERKIEKV 453
Query: 163 CLSNISL 169
+ NI +
Sbjct: 454 TMENIYI 460
>gi|418045389|ref|ZP_12683485.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
gi|351678471|gb|EHA61618.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
Length = 446
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 5 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR-RVLLQSSSGSSVAFGSEMSGG 63
+ IE C G D++ +KSG D G G P+ + +R +++ +S + GSEMSGG
Sbjct: 247 MLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGG 306
Query: 64 ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISD-------AELYNINVAFGACGNC 116
+ NV + + +T RGGY++ I D E+ IN+ +
Sbjct: 307 VRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY------ 360
Query: 117 GSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
D+ + + LP + + K++ T A G++ +I +S+
Sbjct: 361 -----DNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISD 405
>gi|254785604|ref|YP_003073033.1| glycoside hydrolase family 28 domain-containing protein
[Teredinibacter turnerae T7901]
gi|237685733|gb|ACR12997.1| glycoside hydrolase family 28 domain protein [Teredinibacter
turnerae T7901]
Length = 467
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 7/168 (4%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE C G D I++KSG + G P+ ++ IR +++ G V GSE+
Sbjct: 271 SCRNVLIEHCFFDTGDDCIAIKSGRNADGRRLNIPSENIVIRHCEMRAGHG-GVVIGSEI 329
Query: 61 SGGISNVQVE--KIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS 118
SGG+ NV ++ D G +T RGG I+ I + D ++ + A +
Sbjct: 330 SGGVRNVYAHDNRMSSPDLERGFRIKTNSVRGGLIENIYLRDIQIGQVKDAIVINFHYEE 389
Query: 119 HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
FD P + I +I + G AP + ++N
Sbjct: 390 GDAGKFD----PTVRNINLDNISCEHAQQVFQIRGFDRAPIKQLSITN 433
>gi|148269623|ref|YP_001244083.1| glycoside hydrolase family protein [Thermotoga petrophila RKU-1]
gi|147735167|gb|ABQ46507.1| glycoside hydrolase, family 28 [Thermotoga petrophila RKU-1]
Length = 446
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 5 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR-RVLLQSSSGSSVAFGSEMSGG 63
+ IE C G D++ +KSG D G G P+ + +R +++ +S + GSEMSGG
Sbjct: 247 MLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGG 306
Query: 64 ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISD-------AELYNINVAFGACGNC 116
+ NV + + +T RGGY++ I D E+ IN+ +
Sbjct: 307 VRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY------ 360
Query: 117 GSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
D+ + + LP + + K++ T A G++ +I +S+
Sbjct: 361 -----DNEEGEYLPVVRSVFVKNLKATGGKYALRIEGLENDYVKDILISD 405
>gi|325299780|ref|YP_004259697.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319333|gb|ADY37224.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 461
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I+ C G D I++KSG DE G + P+ ++ +R L++ + VA GSE+
Sbjct: 262 SCKNVLIDSCSFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRNCLMKDGH-AGVAIGSEI 320
Query: 61 SGGISNVQVEKIHL----YDSLNGIEFRTTKGRGGYIKQIVISD 100
+GG NV VE + D + I ++ RGG +K I + D
Sbjct: 321 TGGCQNVWVENCRMDSPELDRI--IRIKSNSERGGEVKNIFVRD 362
>gi|15643203|ref|NP_228247.1| exo-poly-alpha-D-galacturonosidase [Thermotoga maritima MSB8]
gi|4980944|gb|AAD35522.1|AE001722_6 exo-poly-alpha-D-galacturonosidase, putative [Thermotoga maritima
MSB8]
Length = 448
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 5 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR-RVLLQSSSGSSVAFGSEMSGG 63
+ IE C G D++ +KSG D G G P+ + +R +++ +S + GSEMSGG
Sbjct: 249 MLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGG 308
Query: 64 ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISD-------AELYNINVAFGACGNC 116
+ NV + + +T RGGY++ I D E+ IN+ +
Sbjct: 309 VRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY------ 362
Query: 117 GSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
D+ + + LP + + K++ T A G++ +I +S+
Sbjct: 363 -----DNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISD 407
>gi|300728050|ref|ZP_07061423.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774652|gb|EFI71271.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 463
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +NV IE C G D I++KSG DE G + P+ ++ IR ++ + V GSE+
Sbjct: 263 SCENVLIERCRFNTGDDCIAIKSGKDEDGRVWNIPSKNIIIRNCEMKDGH-AGVGIGSEI 321
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAEL 103
+GG NV VE + DS N I ++ RGG +K + + + E+
Sbjct: 322 TGGCENVWVENCKM-DSPNLTRVIRIKSNPERGGEVKNLYVRNVEV 366
>gi|268612424|pdb|3JUR|A Chain A, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612425|pdb|3JUR|B Chain B, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612426|pdb|3JUR|C Chain C, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612427|pdb|3JUR|D Chain D, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
Length = 448
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 5 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR-RVLLQSSSGSSVAFGSEMSGG 63
+ IE C G D++ +KSG D G G P+ + +R +++ +S + GSEMSGG
Sbjct: 249 MLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGG 308
Query: 64 ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISD-------AELYNINVAFGACGNC 116
+ NV + + +T RGGY++ I D E+ IN+ +
Sbjct: 309 VRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY------ 362
Query: 117 GSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
D+ + + LP + + K++ T A G++ +I +S+
Sbjct: 363 -----DNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISD 407
>gi|170288299|ref|YP_001738537.1| glycoside hydrolase family protein [Thermotoga sp. RQ2]
gi|170175802|gb|ACB08854.1| glycoside hydrolase family 28 [Thermotoga sp. RQ2]
Length = 446
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 5 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR-RVLLQSSSGSSVAFGSEMSGG 63
+ IE C G D++ +KSG D G G P+ + +R +++ +S + GSEMSGG
Sbjct: 247 MLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGG 306
Query: 64 ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISD-------AELYNINVAFGACGNC 116
+ NV + + +T RGGY++ I D E+ IN+ +
Sbjct: 307 VRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY------ 360
Query: 117 GSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
D+ + + LP + + K++ T A G++ +I +S+
Sbjct: 361 -----DNEEGEYLPVVRSVFVKNLKATGGKYALRIEGLENDYVKDIMISD 405
>gi|254444100|ref|ZP_05057576.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
gi|198258408|gb|EDY82716.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
Length = 476
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V IE+C+ G D I++KSG + G P+ ++ +R ++ G V GSE+
Sbjct: 275 SSKDVLIENCVFDTGDDCIAIKSGRNNDGRRVNVPSENIIVRNCKMKDGHG-GVVIGSEI 333
Query: 61 SGGISNVQVEKIHLY--DSLNGIEFRTTKGRGGYIKQIVISDAEL 103
SGG+ NV VE + + + +T RGG I+ + + D E+
Sbjct: 334 SGGVRNVFVENCEMSSPNLDRALRIKTNSIRGGLIENVFVRDVEV 378
>gi|334124103|ref|ZP_08498112.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
gi|333389102|gb|EGK60268.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
Length = 430
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S + V +E CI++ D I +KSG R D+ IR L + GS + GSE
Sbjct: 204 SCEQVRVERCIVSCNDDNICIKSGRGYEAAQKARTARDIVIRGCTL--NKGSGITLGSET 261
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN 107
SGGI V +E + G ++ + RGG+I+ I++ + L ++
Sbjct: 262 SGGIERVLIEDNAFNGTGVGFRIKSARNRGGFIRDIIVQNLRLTDVR 308
>gi|433656005|ref|YP_007299713.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433294194|gb|AGB20016.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 519
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 16/183 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V I ++G D I++KSG + +++IR L++ G+ V GSEM
Sbjct: 280 SCKDVVILGTRFSVGDDCIAIKSGKLATSRKLPVSSENLYIRNCLMEYGHGA-VVIGSEM 338
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAF-------- 110
SGG+ NV V++ + GI +T +GRG G I +I S+ ++ + F
Sbjct: 339 SGGVKNVHVDRCVFRKTDRGIRIKTRRGRGSTGIIDEIHASNIKMDKVLTPFTINSFYFC 398
Query: 111 ---GACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITI-AGNFTGIQEAPFANICLSN 166
G S D D P I I KDI + + AG G+ E + + N
Sbjct: 399 DADGKTEYVWSKEKLPVD-DRTPYIGNIYLKDITCNDTQVAAGYMYGLPERKIEKVTMEN 457
Query: 167 ISL 169
I +
Sbjct: 458 IYI 460
>gi|325570664|ref|ZP_08146390.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
gi|325156510|gb|EGC68690.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
Length = 438
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C I +G D I++KSG ++ ++ I + G+ V GSEM
Sbjct: 188 SCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCHMLHGHGA-VVLGSEM 244
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CGN 115
SG I NV + D+ G+ ++ +GRGG I+ I +++ + N+ F CG
Sbjct: 245 SGDIRNVTISNCIFQDTDRGVRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGP 304
Query: 116 CGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
G D + P + P +I F +I N+ A F G+ E ++I +I++
Sbjct: 305 KGKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQDIAV 364
>gi|390933294|ref|YP_006390799.1| glycoside hydrolase family protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389568795|gb|AFK85200.1| glycoside hydrolase family 28 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 518
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V I ++G D I++KSG P+ +++IR L++ G+ V GSEM
Sbjct: 280 SCKDVLIAGTRFSVGDDCIAIKSGKLSVSQKLPMPSENLYIRNCLMEYGHGA-VVIGSEM 338
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAF-------- 110
SGG+ NV VE + GI +T +GRG G I +I ++ ++ + F
Sbjct: 339 SGGVKNVHVENCVFKKTDRGIRIKTRRGRGKTGIIDEIHAANIKMEGVLTPFTINSFYFC 398
Query: 111 ---GACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITI-AGNFTGIQEAPFANICLSN 166
G S D D P + I K+I + + AG G+ E + + N
Sbjct: 399 DADGKTEYVWSKEKLPVD-DRTPYVGNIYLKNITCIDAHVAAGYMYGLPERKIERVDMEN 457
Query: 167 I 167
I
Sbjct: 458 I 458
>gi|322437669|ref|YP_004219759.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165562|gb|ADW71265.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 482
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 5/173 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S V I+ C D ISLKSG G G D+HI + + + GSE
Sbjct: 245 SCKGVVIDGCEFVTRDDCISLKSGRGMEGNTIGVVCEDIHISNCTFNDAVWACIGIGSET 304
Query: 61 SGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIKQIVISDAELYNIN---VAFGACGNC 116
SGGI NV VE + I ++ GRG +I+ I ++D E+ + F +
Sbjct: 305 SGGIRNVHVEHCKCLGARTFAIYIKSRPGRGAFIEDIYMNDLEVSGAQQGFLRFNILNSG 364
Query: 117 GSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQ-EAPFANICLSNIS 168
PD D +P I F +I ++ + + I P L+N++
Sbjct: 365 LQDPDPVPGDDGIPTIRNFHFSNIRVKDVPVLVDGASIHPRKPLEGFSLTNVT 417
>gi|329960859|ref|ZP_08299138.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328532145|gb|EGF58949.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 488
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 12/116 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG + G + P+ ++ +R +++ G V GSE+
Sbjct: 290 SCKNVLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCFMKNGHG-GVVIGSEI 348
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
SGG N+ VE + DS N I +T+ RGG I+ + + NV G C
Sbjct: 349 SGGYRNLYVENCQM-DSPNLDRVIRIKTSTCRGGIIENVFVR-------NVTVGQC 396
>gi|325106423|ref|YP_004276077.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975271|gb|ADY54255.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 482
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 17/176 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I C G D I++KSG +E G RP + I ++ G V GSE+
Sbjct: 274 SCKNVLITGCYFDTGDDCIAIKSGRNEDGRNIARPAENHIIENCEMKDGHG-GVVIGSEI 332
Query: 61 SGGISNVQVEKIHLYDSLNG---IEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG 117
SGG N+ + + + DS N + +T+ RGG I+ + + + E+ A C
Sbjct: 333 SGGARNIFAQNL-IMDSPNLDRILRLKTSSLRGGIIENVYMRNVEVGTYKEAAILCDMFY 391
Query: 118 SHPDDDFDPDALPAIDQITFKDIIGTNITIAGNF----TGIQEAPFANICLSNISL 169
P D LP I I+ +++ NI G F +E+P N+ +SN ++
Sbjct: 392 EKPG-----DFLPTIRNISVENL---NIKQGGKFGVLINAYKESPVENLRISNSTI 439
>gi|407688605|ref|YP_006803778.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291985|gb|AFT96297.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 476
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 16/174 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V ED G D I +KSG D G G P+TD+ R L G + GSEM
Sbjct: 273 SSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNNDLGGEDG--IGLGSEM 330
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI V E L++ + F++ RGG ++ + I +++ + F N S+
Sbjct: 331 SGGIKRVFFENNVLHEGDSAYRFKSNLDRGGRVEMVRIRGSKVASFKHLFWFQLNYPSNL 390
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQ-----EAPFANICLSNISL 169
+F PA T+ DII ++T+ T ++ AP N+ +I +
Sbjct: 391 HGNF-----PA----TYTDIIIEDLTVENVGTVLEIHAPDAAPVHNVKFKDIKI 435
>gi|407684232|ref|YP_006799406.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'English Channel 673']
gi|407245843|gb|AFT75029.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'English Channel 673']
Length = 488
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 23/179 (12%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C G D I++KSG + G P +++ I +++ G V GSE+
Sbjct: 291 SCTNVLISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIVIEHCEMKAGHG-GVVIGSEI 349
Query: 61 SGGISNVQVEKIHLY--DSLNGIEFRTTKGRGGYIKQI--------VISDAELYNINVAF 110
SGG+ N+ + + D GI +T RGG++K + + DA + N F
Sbjct: 350 SGGVENLYAQHCTMSSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNF---F 406
Query: 111 GACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
G+ G+ P P ++ IT +++ + A G P + + L+NI++
Sbjct: 407 YEEGDAGNFP---------PLLEDITIENLNVASANRAFVLRGYDHTPISGLTLNNITI 456
>gi|407688164|ref|YP_006803337.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291544|gb|AFT95856.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 488
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 23/179 (12%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C G D I++KSG + G P +++ I +++ G V GSE+
Sbjct: 291 SCTNVLISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIVIEHCEMKAGHG-GVVIGSEI 349
Query: 61 SGGISNVQVEKIHLY--DSLNGIEFRTTKGRGGYIKQI--------VISDAELYNINVAF 110
SGG+ N+ + + D GI +T RGG++K + + DA + N F
Sbjct: 350 SGGVENLYAQHCTMSSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNF---F 406
Query: 111 GACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
G+ G P P ++ IT +++ + A G P + + L+NI++
Sbjct: 407 YEEGDAGKFP---------PLLEDITIENLNVASANRAFVLRGYDHTPISGLTLNNITI 456
>gi|372223095|ref|ZP_09501516.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 472
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 23/180 (12%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
+ NV I++C+ G D I++KSG +E G P+ ++ + + G V GSE+S
Sbjct: 275 AKNVWIKNCVFNTGDDCIAIKSGRNEDGRRVNIPSENIVVEDCKMIDGHG-GVVMGSEIS 333
Query: 62 GGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISD-------AELYNINVAFG 111
G+ NV V+ + DS N I +T RGG+++ + + + + IN+ +G
Sbjct: 334 AGVRNVFVQNCQM-DSPNLDRAIRIKTNTKRGGFVENVYVRNINVGQVKEAVLKINLHYG 392
Query: 112 ACG-NCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
G GS +P + + ++I N G G +E+P N+ L N+++
Sbjct: 393 IYGVQKGSF---------MPKVSNVYLENIAVDNGGKYGVLVNGYEESPVKNVFLKNVTI 443
>gi|266621133|ref|ZP_06114068.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288867222|gb|EFC99520.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 517
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V I ++G D I++KSG G Y P+ ++ IR+ L+++ G +V GSE+
Sbjct: 278 SCKDVEITGLHFSLGDDCIAVKSGKIYMGRRYKTPSENIEIRQCLMENGHG-AVTVGSEV 336
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV----------AF 110
G+ V+V + G+ +T +GRG K V+SD +I + +F
Sbjct: 337 GAGVKAVRVRDCLFRHTDRGLRVKTRRGRG---KDSVLSDISFQHIVMDHVMTPFVVNSF 393
Query: 111 GACGNCGSHPDDDFD----PDALPA------IDQITFKDIIGTNITIAGNFT-GIQEAPF 159
C PD + +ALPA I ++F DI N A +F G+ E
Sbjct: 394 YFC-----DPDGKTEYVQCREALPADERTPEIQNLSFTDIKAANCHAAASFLCGLPEQKI 448
Query: 160 ANICLSNISL 169
I L N+ +
Sbjct: 449 RQIELRNVDI 458
>gi|406597664|ref|YP_006748794.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii ATCC
27126]
gi|406374985|gb|AFS38240.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii ATCC
27126]
Length = 476
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 16/174 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V ED G D I +KSG D G G P+TD+ R L G + GSEM
Sbjct: 273 SSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNNDLGGEDG--IGLGSEM 330
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI V E L++ + F++ RGG ++ + I +++ + F N S+
Sbjct: 331 SGGIKRVFFENNVLHEGDSAYRFKSNLDRGGRVEMVRIRGSKVASFKHLFWFQLNYPSNL 390
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQ-----EAPFANICLSNISL 169
+F PA T+ DII ++T+ T ++ AP N+ +I +
Sbjct: 391 HGNF-----PA----TYTDIIIEDLTVENVGTVLEIHAPDAAPVNNVKFKDIKI 435
>gi|295095844|emb|CBK84934.1| Endopolygalacturonase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 430
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S + V +E CI++ D I +KSG R D+ IR L + GS + GSE
Sbjct: 204 SCEQVRVERCIVSCNDDNICIKSGRGREAAQKARTARDIVIRGCTL--NKGSGITLGSET 261
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN 107
SGGI V +E + G ++ + RGG+I+ I + + L ++
Sbjct: 262 SGGIERVLIEDNAFNGTGVGFRIKSARNRGGFIRDITVQNLHLTDVR 308
>gi|345299336|ref|YP_004828694.1| glycoside hydrolase family protein [Enterobacter asburiae LF7a]
gi|345093273|gb|AEN64909.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 430
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 21/159 (13%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S + V +E C+++ D I +K+G + + R D+ IR +SGS + GSE
Sbjct: 204 SCEQVRVERCVVSCNDDNICIKAGRGQEAASKARSARDIVIRDC--TPNSGSGITLGSET 261
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV------------ 108
SGGI V +E + G ++ + RGG+I+ I + +L ++
Sbjct: 262 SGGIERVLIEHNRFNGTGVGFRIKSARNRGGFIRDIKVRHLQLVDVRFPVMIQLNWFAQY 321
Query: 109 AFGACGNCGSHPD------DDFDPDA-LPAIDQITFKDI 140
++G G+ PD DD +A L + +T ++I
Sbjct: 322 SYGERGDLTDKPDHWRKLADDVQGEAGLTHVSNLTLENI 360
>gi|427385147|ref|ZP_18881652.1| hypothetical protein HMPREF9447_02685 [Bacteroides oleiciplenus YIT
12058]
gi|425727315|gb|EKU90175.1| hypothetical protein HMPREF9447_02685 [Bacteroides oleiciplenus YIT
12058]
Length = 849
Score = 56.6 bits (135), Expect = 8e-06, Method: Composition-based stats.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 13/182 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V IE C + D ++KSG E G+ R T +V IR+ + +G V G+E+
Sbjct: 249 SSSDVLIEYCSLDCQDDCYTMKSGRGEDGLKVNRLTRNVVIRKSIALRGAGGIVC-GTEI 307
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS-- 118
+GG+ NV + + F+T + RGG+++ + + L N+ C GS
Sbjct: 308 AGGVRNVYMCDCVFEGTDQAFRFKTRRPRGGFVENVYVERV-LANVKRQALYCDMLGSAR 366
Query: 119 --------HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLL 170
+P P P I+ D+ T + + +G+ E P N N+
Sbjct: 367 WVGELAQRYPARAVTP-LTPWFANISIHDVEITGCSTLVDVSGLPEIPVKNFFFGNVKAR 425
Query: 171 IN 172
N
Sbjct: 426 CN 427
>gi|397691596|ref|YP_006528850.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
gi|395813088|gb|AFN75837.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
Length = 463
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE C G D I++KSG + G P+ ++ IR ++ G V GSE+
Sbjct: 267 SCKNVLIEGCYFDNGDDCIAIKSGRNNDGRRINAPSENIIIRNCTMKDGHG-GVVIGSEI 325
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG 117
SGG V E+ + DS N + ++ RGG ++ + + + E+ ++ A N
Sbjct: 326 SGGCRFVFAEECKM-DSPNLDRMLRIKSNTVRGGVVEHVYVRNIEVGEVSNAIVRM-NMF 383
Query: 118 SHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
P + D P I +++ A F G++E+P N+ + N
Sbjct: 384 YDPKEIGPRDFPPKFRNIRVENVTSRKSDYALEFLGLEESPIENVEIIN 432
>gi|242037693|ref|XP_002466241.1| hypothetical protein SORBIDRAFT_01g004190 [Sorghum bicolor]
gi|241920095|gb|EER93239.1| hypothetical protein SORBIDRAFT_01g004190 [Sorghum bicolor]
Length = 455
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 83/200 (41%), Gaps = 16/200 (8%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEM 60
S +V + +C I G D IS++ G T +H+ V+ G S+ + G +
Sbjct: 243 SKDVRVTNCKIKTGDDCISIEDG-----------THKLHVSNVVCGPGHGISIGSLGDDN 291
Query: 61 S-GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
S +S + ++ + L+ + NG +T +G GY K I + +YN+ N
Sbjct: 292 SRAQVSGITIDSVQLHGTTNGARIKTYQGGSGYAKDITFQNMIMYNVKNPIIIDQNYCDK 351
Query: 120 PDDDFDPDALPAIDQITFKDIIGTNITI-AGNFTGIQEAPFANICLSNISLLINPGSYNS 178
+ + I + FK+I GT IT A + P I L NI L + G N+
Sbjct: 352 AKPCREQRSAVQISNVVFKNIRGTTITKDAIKMHCSKNVPCQGITLQNIDLKMQGGKGNT 411
Query: 179 WE-CSNIHGSSE-SVFPEPC 196
C N V P+PC
Sbjct: 412 ESTCQNAKWRKYGKVVPQPC 431
>gi|329954471|ref|ZP_08295562.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328527439|gb|EGF54436.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 467
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG ++ G + P+ ++ +R +++ G V GSE+
Sbjct: 269 SCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWNIPSENIIVRSCFMKNGHG-GVVIGSEI 327
Query: 61 SGGISNVQVEKIHL--YDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
SGG N+ VE + D I +T+ RGG I+ + + NV G C
Sbjct: 328 SGGYRNLFVENCRMDSPDLDRVIRIKTSTCRGGLIENVFVR-------NVTVGQC 375
>gi|407700954|ref|YP_006825741.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Black Sea 11']
gi|407250101|gb|AFT79286.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Black Sea 11']
Length = 476
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 16/174 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V ED G D I +KSG D G G P+TD+ R L G + GSEM
Sbjct: 273 SSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNNDLGGEDG--IGLGSEM 330
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI V E L + + F++ RGG ++ I I +++ + F N S+
Sbjct: 331 SGGIKRVFFENNVLQEGDSAYRFKSNLDRGGRVEMIRIRGSKVASFKHLFWFQLNYPSNL 390
Query: 121 DDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQ-----EAPFANICLSNISL 169
+F PA T+ DII ++T+ T ++ AP N+ +I++
Sbjct: 391 HGNF-----PA----TYTDIIIEDLTVENVGTVLEIHAPDAAPVHNVKFKDITI 435
>gi|445494990|ref|ZP_21462034.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
gi|444791151|gb|ELX12698.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
Length = 615
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 18/114 (15%)
Query: 3 DNVCIEDCIIAMGHDAISLKSGWD---EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSE 59
D+V I+ C G D I++K+G D +YG P+ ++ I+ +QS G+ V GSE
Sbjct: 363 DHVLIDGCTFDTGDDCIAIKAGKDLDTQYG-----PSQNIVIQNCTMQSGHGA-VTLGSE 416
Query: 60 MSGGISNVQVEKIHLYDSLN--------GIEFRTTKGRGGYIKQIVISDAELYN 105
M+GGI NV + + ++ ++N I +T RGGY++ + D + N
Sbjct: 417 MAGGIQNVYAQNL-VFQNINWATNPLNTAIRLKTNLNRGGYLRNFYVRDISIPN 469
>gi|86143609|ref|ZP_01061994.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830056|gb|EAQ48517.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 491
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 102/234 (43%), Gaps = 33/234 (14%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS + +++C I D LK+G D G+ RPT V IR + + SG + GSE
Sbjct: 251 SSKYILVQNCDIDCNDDNFCLKAGRDWDGLRVDRPTEYVVIRDCIALAGSGLT-TIGSET 309
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG--- 117
SG I +V V I + G++ ++ RGG ++ I + + ++ ++ N
Sbjct: 310 SGDIRHVFVSNIQGKGTKTGLKIKSATNRGGTVEDIHMQNIKMDSVGTFMQVSMNWNPSY 369
Query: 118 --SHPDDDFDPDALPA-----IDQI--------TFKDIIGTNITIAGN-----FTGIQEA 157
S + +D D++P ++++ TFKDI +NI + G G++ +
Sbjct: 370 SYSKLPEGYDYDSIPKRWKTLLEEVTPPEKGIPTFKDISISNIEVQGAKRAIYVNGMETS 429
Query: 158 PFANICLSNISLLINPGSY----NSWECSNI-----HGSSESVFPEPCPELENS 202
+NI L+++ + W N+ GS+ ++ P E N+
Sbjct: 430 TVSNIQLTDVHIAAQEAGQITYSKDWTLDNVSLNIADGSTLTIENAPGVEFPNT 483
>gi|261880664|ref|ZP_06007091.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270332617|gb|EFA43403.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 851
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+ D V I++C G D I++KSG + G + +P+ ++ IR + G V GSE+
Sbjct: 266 ACDGVLIQNCTFDTGDDCIAIKSGRNNDGRLWNKPSQNIIIRNCKMADGHG-GVVIGSEI 324
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG 117
SGG NV E ++ DS + + +T RGG I+ I + NV G C
Sbjct: 325 SGGCRNVFAEDCYM-DSPHLDRVLRIKTNNCRGGLIENINMR-------NVTVGQCNEAV 376
Query: 118 SHPDDDFDP 126
+ D++P
Sbjct: 377 LRINLDYEP 385
>gi|358066336|ref|ZP_09152863.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
gi|356695387|gb|EHI57019.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
Length = 539
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 18/184 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V I ++G D I++KSG G Y P+ D+ IR+ ++ GS + GSEM
Sbjct: 301 SCKDVEIAGVYFSLGDDCIAIKSGKIYMGAKYRVPSEDIVIRQCCMRDGHGS-ITIGSEM 359
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGACGNCGS 118
+GG+ ++ V+ + G+ +T +GRG I I+ + ++ F NC
Sbjct: 360 AGGVKHLTVKDCLFLHTDRGLRIKTRRGRGEAAVIDGILFEHIRMDHVMTPF--VINCFY 417
Query: 119 HPDDDFDPDAL------------PAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLS 165
+ D D + + P + ++ F++I +N +A + G+ E + +
Sbjct: 418 YCDPDGHSEYVATKEMLPIDERTPYVKELVFRNIEASNCHVAAAYLYGLPEQKIDRVEME 477
Query: 166 NISL 169
+I +
Sbjct: 478 HIHV 481
>gi|354723575|ref|ZP_09037790.1| glycoside hydrolase family protein [Enterobacter mori LMG 25706]
Length = 430
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 26/193 (13%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S + V IE C ++ D I +K+G R + IR +L + GS + GSE
Sbjct: 204 SCEQVRIERCTVSCNDDNICIKAGRGREAAPKARTARAIVIRECVL--NKGSGITLGSET 261
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV------------ 108
SGGI +V +E + G ++ + RGG+I+ I + + L N+
Sbjct: 262 SGGIEHVLIENNRFNGTGVGFRIKSARNRGGFIRHITVRNLLLQNVRFPVLIQLNWFPQY 321
Query: 109 AFGACGNCGSHPD------DDFDPDA------LPAIDQITFKDIIGTNITIAGNFTGIQE 156
++G GN P+ D + +A P + IT + + A G +
Sbjct: 322 SYGDSGNLQDKPEHWRKLADGVEGEAGLTEVSHPTLSNITARRSDSNLFSRAFFIEGYPD 381
Query: 157 APFANICLSNISL 169
P + L NIS+
Sbjct: 382 RPVCGLTLDNISV 394
>gi|182416077|ref|YP_001821143.1| glycosyl hydrolase [Opitutus terrae PB90-1]
gi|177843291|gb|ACB77543.1| glycosyl hydrolase family 88 [Opitutus terrae PB90-1]
Length = 865
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S ++ +ED + G D I++KSG + G PT ++ IRR +++ G V GSE
Sbjct: 660 SCRDILVEDTLFDTGDDCIAIKSGRNGDGRRVNVPTENMVIRRCVMKDGHG-GVVLGSEC 718
Query: 61 SGGISNVQVEKIHL--YDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVA 109
+GGI N+ VE + D G+ F+ RGG ++ + + + ++ + A
Sbjct: 719 TGGIRNIFVEDCEMDSPDLDRGLRFKNNAVRGGVLENVFMRNVKIGRVGEA 769
>gi|300770984|ref|ZP_07080861.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762257|gb|EFK59076.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
Length = 473
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
NV I+DC G D I++KSG DE G GRP + I +++ G V GSE++GG
Sbjct: 278 NVLIKDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCIMKDGHG-GVVIGSEIAGG 336
Query: 64 ISNVQVEKIHLYDSLNG---IEFRTTKGRGGYIKQIVISDAEL 103
N+ + DS N + +T+ RGG I+ + + D E+
Sbjct: 337 ARNIYALNNKM-DSPNLDRILRLKTSSSRGGIIENVFMKDVEV 378
>gi|336429336|ref|ZP_08609303.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336002947|gb|EGN33044.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 521
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S ++V I C ++G D I++KSG P + + IR+ +++ G V GSE+
Sbjct: 279 SCEHVEIAGCHFSLGDDCIAIKSGKGRRAQENPVPGSHIQIRQCFMENGHGG-VTIGSEI 337
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGG--YIKQIVISDAELYNINVAFGACGNC-- 116
S G+ +V V ++ G+ +T +GRG + ++ + + ++ F NC
Sbjct: 338 SSGVHHVTVRDCCFRNTDRGLRIKTRRGRGKSCVVDAVLFENIHMEQVDTPFVL--NCFY 395
Query: 117 GSHPDDDFD----PDALPA------IDQITFKDIIGTNITIAGN-FTGIQEAPFANICLS 165
PD D +ALPA + ++ F+ I T+ IA F G+ E ++ +
Sbjct: 396 FCEPDGRSDYVQTKEALPADERTPNMGELVFRHIYCTDCHIAAAFFYGLPEKKIKSVIME 455
Query: 166 NISL 169
++ +
Sbjct: 456 DVRI 459
>gi|227537592|ref|ZP_03967641.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242594|gb|EEI92609.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
Length = 473
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
NV I+DC G D I++KSG DE G GRP + I +++ G V GSE++GG
Sbjct: 278 NVLIKDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCIMKDGHG-GVVIGSEIAGG 336
Query: 64 ISNVQVEKIHLYDSLNG---IEFRTTKGRGGYIKQIVISDAEL 103
N+ + DS N + +T+ RGG I+ + + D E+
Sbjct: 337 ARNIYALNNKM-DSPNLDRILRLKTSSSRGGIIENVFMKDVEV 378
>gi|238794982|ref|ZP_04638578.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
gi|238725685|gb|EEQ17243.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
Length = 442
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 30/196 (15%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V +E C ++ D I +K+G G D+ IR L SG + GSE
Sbjct: 216 SSQQVRVEHCRVSCNDDNICVKAGRGAEAERIGATARDIVIRECELLHGSG--ITLGSET 273
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
SGGI V +E I + G ++ + RGG+I+ + +S ++ +++ F N P
Sbjct: 274 SGGIEQVLIENITFSGTGVGFRIKSARNRGGFIRHVRVSGLQMTDVHYPFMFQLNW--FP 331
Query: 121 DDDFDP----DALPAIDQITFKDIIG-------TNITI---------------AGNFTGI 154
+ P +++PA Q + + G NITI A G
Sbjct: 332 AYSYSPITANESMPAHWQSLSQSVEGEAGLTQVENITISTVRSVLSSSEVFSRAFFIEGN 391
Query: 155 QEAPFANICLSNISLL 170
E P N+ SN++L+
Sbjct: 392 SEKPIDNLHFSNVTLV 407
>gi|386820345|ref|ZP_10107561.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386425451|gb|EIJ39281.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 514
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 23/191 (12%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V I++C I D LK+G D G RPT V IR + + +G GSE
Sbjct: 283 SSKWVLIQNCDIDCNDDNFCLKAGRDWDGQRVNRPTEYVVIRNCIARKGAGL-FTLGSET 341
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG--- 117
+G I +V V I + NG+ ++ RGG ++ I + + ++ ++ N
Sbjct: 342 AGSIRHVYVSNIKGLGTSNGLNIKSALTRGGTVEDISLQNIQMDSVKTFVKISMNWNPSY 401
Query: 118 --SHPDDDFDPDALP-----AIDQI-------TFKDIIGTNITIAG-----NFTGIQEAP 158
S + +D D++P + ++ TFK+I +NI + G N G++ +
Sbjct: 402 SYSKLPEGYDIDSIPIHWKKLLKEVPASKGIPTFKNISLSNIDVKGAEKAMNVKGLENSI 461
Query: 159 FANICLSNISL 169
NI L+++ +
Sbjct: 462 IENISLNDVHI 472
>gi|224130352|ref|XP_002328587.1| predicted protein [Populus trichocarpa]
gi|222838569|gb|EEE76934.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 93/189 (49%), Gaps = 17/189 (8%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEM 60
S NV ++DC I G D +S+ +G ++++ ++R+ G S+ + G +
Sbjct: 245 STNVVLQDCKIGTGDDCVSIVNG-----------SSNIKMKRIFCGPGHGISIGSLGKDN 293
Query: 61 SGG-ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-NVAFGACGNCGS 118
S G ++ V ++ L ++ NG+ +T +G GY++ + + + N+ N C S
Sbjct: 294 STGMVTKVVLDTAFLRETTNGLRIKTWQGGHGYVRGVRFENVGMENVANPVIIDQFYCDS 353
Query: 119 HPDDDFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSNISLLINPGSYN 177
P + + I +IT+++I GT + A F P +NI LSNI+L N G+
Sbjct: 354 -PKTCHNQTSAVEISEITYRNISGTTKSSKAMKFACSDTVPCSNIVLSNINLEKNDGTEE 412
Query: 178 SWECSNIHG 186
++ C++ G
Sbjct: 413 TY-CNSAQG 420
>gi|390436865|ref|ZP_10225403.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 430
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V +E C ++ D I +KSG R D+ IR L SG + GSE
Sbjct: 204 SSQLVRVEGCTVSCNDDNICVKSGRGAEAQQLARTARDIIIRDCTLLKGSG--ITLGSET 261
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
SGGI NV +E + G ++ + RGG+IK I++ + ++ F
Sbjct: 262 SGGIENVIIEHNRFSGTGVGFRIKSARNRGGWIKNIIVRHLIMEDVGYPF 311
>gi|167763470|ref|ZP_02435597.1| hypothetical protein BACSTE_01844 [Bacteroides stercoris ATCC
43183]
gi|167698764|gb|EDS15343.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 467
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG ++ G + P+ ++ +R +++ G V GSE+
Sbjct: 269 SCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWNIPSENIIVRGCFMKNGHG-GVVIGSEI 327
Query: 61 SGGISNVQVEKIHL--YDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
SGG N+ VE + D I +T+ RGG I+ + + NV G C
Sbjct: 328 SGGYRNLFVENCRMDSPDLDRVIRIKTSTCRGGLIENVFVR-------NVTVGQC 375
>gi|372276037|ref|ZP_09512073.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 430
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V +E C ++ D I +KSG R D+ IR L SG + GSE
Sbjct: 204 SSQLVRVEGCTVSCNDDNICVKSGRGAEAQQLARTARDIIIRDCTLLKGSG--ITLGSET 261
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF 110
SGGI NV +E + G ++ + RGG+IK I++ + ++ F
Sbjct: 262 SGGIENVIIEHNRFSGTGVGFRIKSARNRGGWIKNIIVRHLIMEDVGYPF 311
>gi|269957316|ref|YP_003327105.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
gi|269305997|gb|ACZ31547.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
Length = 459
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 78/188 (41%), Gaps = 22/188 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I C I +G D I+LK+G + +V + L G V GSEM
Sbjct: 194 SCRNVRISGCHIDVGDDCIALKAGTEASPERVA--CENVVVTGCTLVHGHGG-VVLGSEM 250
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF---------- 110
SGGI NV V + GI + +GRGG ++ + +S+ + ++
Sbjct: 251 SGGIRNVVVADCVFQGTDRGIRLKARRGRGGVVEDVRVSNVVMDDVGCPLVLNQHYDRGP 310
Query: 111 ----GACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLS 165
G+ G+ P D P +IT + N+ A F G+ E P A + L
Sbjct: 311 GGDSPHVGDRGALPVD----ATTPLFRRITVAHVSARNVRAAAVFALGLAEQPVAELVLD 366
Query: 166 NISLLINP 173
++++ P
Sbjct: 367 DVAVSFAP 374
>gi|323451042|gb|EGB06920.1| hypothetical protein AURANDRAFT_65104 [Aureococcus anophagefferens]
Length = 915
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 27/153 (17%)
Query: 7 IEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLL----QSSSGSSVAFGSEMSG 62
+E+ + D + +KSG D +GI PT DV +R + + A GSEMSG
Sbjct: 600 VENVYVNNSDDGVCMKSGLDGFGINLAIPTEDVLVRNITCGDRRDDAGRGGFAVGSEMSG 659
Query: 63 GISNVQVEKIHLYDSL-------NGIEFRTTKGRGGYIKQIVISDAEL------YNINVA 109
G+ NV DS+ GI+ +T+ GRGGYI + + N+NV
Sbjct: 660 GVRNVTFR-----DSVLGAGPQSRGIDVKTSVGRGGYIIDVTFENIRAPSPFPKANVNV- 713
Query: 110 FGACGNCGSHPDDDFDPDALPAIDQITFKDIIG 142
A + P DD +P I + F ++ G
Sbjct: 714 HSALRDDPDVPGDDL----VPVIGNLRFANVSG 742
>gi|332533447|ref|ZP_08409312.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037156|gb|EGI73613.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 474
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 20/175 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S D+V I++C+ G D I++KSG + G G P+ ++ I ++ G V GSE+
Sbjct: 273 SCDHVHIKNCVFDTGDDCIAIKSGRNADGRRVGVPSQNIVIENCHMKEGHG-GVVIGSEI 331
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVA-----FGA 112
SGG++NV V+ + DS + I +T RGG I+ I I + ++ + A +
Sbjct: 332 SGGVNNVFVQNCTM-DSPHLERAIRIKTNSVRGGLIEHIRIRNVDVGTVKNAVVINFYYE 390
Query: 113 CGNCGSHPDDDFDPDALPAIDQITFKDIIGTNI-TIAGNFTGIQEAPFANICLSN 166
G+ G FD P + I +++ N+ + A G + AP +I N
Sbjct: 391 EGDAGQ-----FD----PTVRDIQIENLHCKNVLSKAFYLNGFERAPINDIHFKN 436
>gi|410636673|ref|ZP_11347265.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
gi|410143760|dbj|GAC14470.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
Length = 476
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 23/177 (12%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
+V I++CI G D I++KSG + G G + ++ I +++ G V GSE+SGG
Sbjct: 285 DVLIQNCIFDTGDDCIAIKSGRNADGRRVGVASENILIENCQMKAGHG-GVVIGSEISGG 343
Query: 64 ISNVQVEKIHLY--DSLNGIEFRTTKGRGGYIKQI--------VISDAELYNINVAFGAC 113
+ N+ V+ + D GI +T RGG++K + + DA + N G
Sbjct: 344 VRNLYVDNCEMSSPDLDRGIRIKTNSIRGGHLKNLNYRNINIGQVKDAIVINFYYEEGDV 403
Query: 114 GNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLL 170
G P ++ I +++ + T A + G P + L N++ +
Sbjct: 404 GKF------------TPVLEDIRIENLWVEHATRAFSLRGYPHTPITGVTLKNLTFV 448
>gi|393783422|ref|ZP_10371595.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
gi|392668855|gb|EIY62348.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
Length = 468
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG + G + P+ ++ +R +++ G V GSE+
Sbjct: 269 SCKNVLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCKMKNGHG-GVVIGSEI 327
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISD 100
SGG N+ VE + DS N I +T+ RGG I+ + + D
Sbjct: 328 SGGYRNLFVENCQM-DSPNLDRVIRIKTSTCRGGIIENVFVRD 369
>gi|430827435|ref|ZP_19445578.1| polygalacturonase [Enterococcus faecium E0164]
gi|430444043|gb|ELA53955.1| polygalacturonase [Enterococcus faecium E0164]
Length = 445
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSE 59
S NV I + I +G D I++K+G ++ Y R ++ I + G V GSE
Sbjct: 186 SCKNVRISNYHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGG-VVLGSE 241
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA-----CG 114
MSG I N+ + ++ GI ++ +GRGG ++ I +S+ + N+ F CG
Sbjct: 242 MSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCG 301
Query: 115 NCGSHP---DDDFDP--DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNIS 168
G P + P + PA +I F +I N+ + F G+ E I NI
Sbjct: 302 PRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNID 361
Query: 169 L 169
+
Sbjct: 362 V 362
>gi|407978683|ref|ZP_11159511.1| glycoside hydrolase [Bacillus sp. HYC-10]
gi|407414714|gb|EKF36344.1| glycoside hydrolase [Bacillus sp. HYC-10]
Length = 463
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IEDC G D I++KSG +E G G P+ ++ IRR ++ G V GSE+
Sbjct: 268 SCRNVLIEDCYFDNGDDCIAIKSGRNEDGRRIGVPSENIVIRRNEMRDGHG-GVTIGSEI 326
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQI 96
SGG+ V E ++ DS N + +T RGG I+ I
Sbjct: 327 SGGVRYVYAED-NIMDSPNLDRALRIKTNSVRGGTIEHI 364
>gi|407700483|ref|YP_006825270.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Black Sea 11']
gi|407249630|gb|AFT78815.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Black Sea 11']
Length = 488
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 23/179 (12%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I +C G D I++KSG + G P +++ I +++ G V GSE+
Sbjct: 291 SCTNVIISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIIIEHCEMKAGHG-GVVIGSEI 349
Query: 61 SGGISNVQVEKIHLY--DSLNGIEFRTTKGRGGYIKQI--------VISDAELYNINVAF 110
SGG+ N+ + + D GI +T RGG++K + + DA + N F
Sbjct: 350 SGGVENLYAQYCTMSSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNF---F 406
Query: 111 GACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
G+ G+ P P ++ IT +++ + A G P + + L+N+++
Sbjct: 407 YEEGDAGNFP---------PLLEDITIENLNVVSANRAFVLRGYDHTPISGLTLNNVTI 456
>gi|315499125|ref|YP_004087929.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315417137|gb|ADU13778.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 512
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 14/186 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS ++ I A+G D I+LKSG RPT V I ++ G+ V GSEM
Sbjct: 275 SSTDIVISGVDFAVGDDCIALKSGKISMARRSVRPTRRVRISNCRMKDGHGA-VVIGSEM 333
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGACGNCGS 118
+ G+ ++ V+ ++ GI +T +GRG I+ + + + AF
Sbjct: 334 ACGVYDISVQTCLFINTDRGIRLKTRRGRGREAVIRGLNCRHIRMEGVGSAFVINSFYWC 393
Query: 119 HPDDDFDP----------DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNI 167
PD D + P+I I I + AG + G+ E P + L +I
Sbjct: 394 DPDGKTDEVADRNPRPVDEGTPSIGDIRLSHIDAIGVRHAGLYVLGLPEQPVDGLTLDHI 453
Query: 168 SLLINP 173
L +P
Sbjct: 454 RLRFDP 459
>gi|427385675|ref|ZP_18881982.1| hypothetical protein HMPREF9447_03015 [Bacteroides oleiciplenus YIT
12058]
gi|425726714|gb|EKU89577.1| hypothetical protein HMPREF9447_03015 [Bacteroides oleiciplenus YIT
12058]
Length = 532
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ IE+C I D I LK+G D G+ R T +V IR +G + GSE
Sbjct: 283 SSTNILIENCTIDCNDDIICLKAGRDADGLRVNRSTENVLIRNCTAHRGAG-LITCGSET 341
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA 112
SG I N+ + + ++ RGG ++ + ++ E N+ FGA
Sbjct: 342 SGSIRNILAYDLKAIGTSVVFLLKSAMTRGGTVENVYVTRVEAENVRQVFGA 393
>gi|395803704|ref|ZP_10482948.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434258|gb|EJG00208.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 451
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIA-YGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+ +V IE+ G D +++K+G D G A P+ ++ IR + G V GSEM
Sbjct: 253 AKDVLIENVTFDNGDDNVAIKAGRDHEGRANTATPSQNIIIRNCNFKGLHG--VVIGSEM 310
Query: 61 SGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIKQIVISDAEL 103
S G+ NV VE L GI +T RGGYIK I + + +L
Sbjct: 311 SAGVQNVFVENCKTAGYLKRGIYLKTNADRGGYIKNIFVRNIQL 354
>gi|197105922|ref|YP_002131299.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479342|gb|ACG78870.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 470
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S D+V IEDC + G D I+L SG +E G G P +V IR + G + GS++
Sbjct: 270 SCDHVLIEDCFFSTGDDCIALNSGRNEDGRRVGVPCQNVVIRGCRMADGHG-GLTIGSQI 328
Query: 61 SGGISNVQVEKIHL--YDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVA 109
SG + NV E L D + I F+ RGG ++++ + E+ + A
Sbjct: 329 SGHVRNVFAENCRLDSPDLDHAIRFKNNALRGGIVERVRYRNLEVGQVRRA 379
>gi|423223575|ref|ZP_17210044.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638200|gb|EIY32047.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 532
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 22/184 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I +C + G DAI LKSG + G G P ++ I + G V GS+
Sbjct: 263 SCTNALIVNCAVDAGDDAICLKSGIGDVGRRRG-PCANIIIDNCTVFHGHGGFV-IGSDT 320
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
GGI V V D+ G+ F++ +GRGG + + + + + +I A A +
Sbjct: 321 GGGIDRVSVRNCRFIDTDTGLRFKSKRGRGGVVSNVYVDNIMMNDI--ANYAIWFDSYYQ 378
Query: 121 DDDFDPDALPAIDQIT-------------FKDIIGTNITI-----AGNFTGIQEAPFANI 162
+ +PD +P ++T F+DI +NIT A F G+ E +N+
Sbjct: 379 EKTPEPDGIPEGGEMTDVPFMPVTDDTPCFQDIHISNITCRDAGRAMFFNGLPEMNVSNV 438
Query: 163 CLSN 166
L++
Sbjct: 439 SLTD 442
>gi|196228364|ref|ZP_03127231.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
gi|196227767|gb|EDY22270.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
Length = 456
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V IEDC G D I++KSG + G G ++ IRR ++ G V GSE+
Sbjct: 262 SCHDVLIEDCTFQTGDDCIAIKSGRNNDGRRVGVAAENIIIRRCTMKDGHG-GVTIGSEV 320
Query: 61 SGGISNVQVEKIHLYDSL--NGIEFRTTKGRGGYIKQIVISDAELYNINVA 109
SGG+ NV V + F++ RGG I+ I +S ++ + A
Sbjct: 321 SGGVRNVFVSDCQMDSPRLDRAFRFKSNAVRGGEIENIQVSQVKIGRVARA 371
>gi|157693735|ref|YP_001488197.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
gi|157682493|gb|ABV63637.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
Length = 463
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IEDC G D I++KSG +E G G P+ ++ IRR ++ G V GSE+
Sbjct: 268 SCRNVLIEDCYFDNGDDCIAIKSGRNEDGRRIGIPSENIVIRRNEMRDGHG-GVTIGSEI 326
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQI 96
SGG+ V E ++ DS N + +T RGG I+ I
Sbjct: 327 SGGVRYVYAEN-NVMDSPNLDRALRIKTNSVRGGTIEHI 364
>gi|395803712|ref|ZP_10482956.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434266|gb|EJG00216.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 492
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 19/178 (10%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N+ I +C G D I++K+G D G P+ ++ ++ + G V GSE+S
Sbjct: 292 SQNILIRNCTFNTGDDCIAIKAGRDGDGRRVAIPSKNIIVQNCKMIDGHG-GVVIGSEIS 350
Query: 62 GGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNIN---VAFGACGN 115
G++NV VE + DS N I +T RGG I+ I + + E+ + + N
Sbjct: 351 AGVNNVFVENC-VMDSPNLDRAIRIKTNSRRGGIIENIYVRNLEVGTVKECVLKLNMFYN 409
Query: 116 CGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFT----GIQEAPFANICLSNISL 169
+F +P I ++ +++ N G ++ G E+P NI L N+ +
Sbjct: 410 VYGSQTGNF----IPTIRNVSLENVTVKN---GGKYSVWAEGYAESPVENITLKNVKI 460
>gi|298482124|ref|ZP_07000312.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271681|gb|EFI13254.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 487
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ +E+C + D I +K+G D G+ RPT +V +R + + +G + GSE
Sbjct: 252 SSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAG-LLTCGSET 310
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAE 102
SG I NV + Y + + +++ RGG ++ I ++ E
Sbjct: 311 SGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVENIYMTRVE 352
>gi|189463211|ref|ZP_03011996.1| hypothetical protein BACCOP_03924 [Bacteroides coprocola DSM 17136]
gi|189430190|gb|EDU99174.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 431
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +NV IEDC G D I++KSG DE G + P ++ +R ++ + VA GSE+
Sbjct: 232 SCENVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPCKNIIVRECRMKDGH-AGVAIGSEI 290
Query: 61 SGGISNVQVEKIHL----YDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
+GG NV VE + D + I ++ RGG + + + N+ G C
Sbjct: 291 TGGCHNVWVENCRMDSPELDRI--IRIKSNPMRGGNVANVFVR-------NITVGEC 338
>gi|237712634|ref|ZP_04543115.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423228996|ref|ZP_17215401.1| hypothetical protein HMPREF1063_01221 [Bacteroides dorei
CL02T00C15]
gi|423244835|ref|ZP_17225909.1| hypothetical protein HMPREF1064_02115 [Bacteroides dorei
CL02T12C06]
gi|229453955|gb|EEO59676.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634749|gb|EIY28661.1| hypothetical protein HMPREF1063_01221 [Bacteroides dorei
CL02T00C15]
gi|392641222|gb|EIY35006.1| hypothetical protein HMPREF1064_02115 [Bacteroides dorei
CL02T12C06]
Length = 494
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ IE+C + D I LK+G D G+ RPT ++ +R + + +G + GSE
Sbjct: 254 SSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPTENIIVRGCIARKGAG-LITCGSET 312
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA 112
SG I NV + Y + + + ++ RGG ++ I ++ N+ A
Sbjct: 313 SGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVENIYMTQVTADNVRHVLAA 364
>gi|212690878|ref|ZP_03299006.1| hypothetical protein BACDOR_00366 [Bacteroides dorei DSM 17855]
gi|265752316|ref|ZP_06088109.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345512460|ref|ZP_08791986.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423239837|ref|ZP_17220952.1| hypothetical protein HMPREF1065_01575 [Bacteroides dorei
CL03T12C01]
gi|212666560|gb|EEB27132.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229438029|gb|EEO48106.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|263237108|gb|EEZ22578.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392645462|gb|EIY39189.1| hypothetical protein HMPREF1065_01575 [Bacteroides dorei
CL03T12C01]
Length = 494
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ IE+C + D I LK+G D G+ RPT ++ +R + + +G + GSE
Sbjct: 254 SSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPTENIIVRGCIARKGAG-LITCGSET 312
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA 112
SG I NV + Y + + + ++ RGG ++ I ++ N+ A
Sbjct: 313 SGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVENIYMTQVTADNVRHVLAA 364
>gi|255691082|ref|ZP_05414757.1| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623432|gb|EEX46303.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 487
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ +E+C + D I +K+G D G+ RPT +V +R + + +G + GSE
Sbjct: 252 SSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAG-LLTCGSET 310
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAE 102
SG I NV + Y + + +++ RGG ++ I ++ E
Sbjct: 311 SGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVENIYMTRVE 352
>gi|408369670|ref|ZP_11167450.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407744724|gb|EKF56291.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 454
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 17/178 (9%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N+ IE+C G DAI++KSG ++ P ++ I+ + + +A GSE+S
Sbjct: 263 SQNIIIENCTFDQGDDAIAVKSGRNQDAWRLATPAKNIVIKNCKI-INGHQLMAIGSELS 321
Query: 62 GGISNVQVEKIHLYD--SLNGIEF-RTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS 118
GGI N+ + + LN + F +T + RGG ++S+ + +I A G G
Sbjct: 322 GGIENIYMSNCQVEQGAKLNHLLFIKTNERRGG-----IVSNIYMDSIQAGEIAEGILGI 376
Query: 119 HPDDDFD--------PDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNIS 168
D + L I + DI N+ +G ++ P N+ L+ ++
Sbjct: 377 DTDVLYQWRNLVPTYQRELTVIKDVYLSDIHAENVAFISKISGQEQVPVKNVVLNRVT 434
>gi|423294934|ref|ZP_17273061.1| hypothetical protein HMPREF1070_01726 [Bacteroides ovatus
CL03T12C18]
gi|392674514|gb|EIY67960.1| hypothetical protein HMPREF1070_01726 [Bacteroides ovatus
CL03T12C18]
Length = 487
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ +E+C + D I +K+G D G+ RPT +V +R + + +G + GSE
Sbjct: 252 SSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAG-LLTCGSET 310
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAE 102
SG I NV + Y + + +++ RGG ++ I ++ E
Sbjct: 311 SGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVENIYMTRVE 352
>gi|160886983|ref|ZP_02067986.1| hypothetical protein BACOVA_04997 [Bacteroides ovatus ATCC 8483]
gi|423288919|ref|ZP_17267770.1| hypothetical protein HMPREF1069_02813 [Bacteroides ovatus
CL02T12C04]
gi|156107394|gb|EDO09139.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|392669009|gb|EIY62501.1| hypothetical protein HMPREF1069_02813 [Bacteroides ovatus
CL02T12C04]
Length = 487
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ +E+C + D I +K+G D G+ RPT +V +R + + +G + GSE
Sbjct: 252 SSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAG-LLTCGSET 310
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAE 102
SG I NV + Y + + +++ RGG ++ I ++ E
Sbjct: 311 SGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVENIYMTRVE 352
>gi|423241479|ref|ZP_17222592.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
gi|392641372|gb|EIY35149.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
Length = 463
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 14/117 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IEDC G D I++KSG DE G + P+ ++ +R ++ + VA GSE+
Sbjct: 264 SCRNVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRHCRMKDGH-AGVAIGSEV 322
Query: 61 SGGISNVQVEKIHL----YDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
+GG NV VE + D + I ++ RGG ++ I I N+ G C
Sbjct: 323 TGGCRNVWVENCTMDSPELDRI--IRIKSNAMRGGEVENIFIR-------NIRVGEC 370
>gi|302671860|ref|YP_003831820.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
gi|302396333|gb|ADL35238.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
Length = 524
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV + I++G D +++KSG + + + T ++ IR + GS V GSE+
Sbjct: 278 SCKNVLVAGTTISVGDDCMAIKSGKFYMSMEHHKVTENIIIRNCRFERGHGS-VTVGSEV 336
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGACGNCGS 118
+GG+ NV+V + + G+ +T +GRG + I+ + ++ +++ F
Sbjct: 337 AGGVKNVRVTQCIFDGTDRGLRIKTRRGRGERSVLDDILFENIDMNGVHMPFTVNMFYFC 396
Query: 119 HPD--DDFDPDALPA-IDQIT--FKDIIGTNITIAGN------FTGIQEAPFANICLSNI 167
PD D+ + PA +D++T I G NI G G+ E P + NI
Sbjct: 397 DPDGHTDYVQNQEPAPVDEMTPAIGSITGRNIECKGASASIVCAVGLPERPIEKLVFENI 456
Query: 168 S 168
+
Sbjct: 457 N 457
>gi|345513952|ref|ZP_08793467.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423230893|ref|ZP_17217297.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|423244604|ref|ZP_17225679.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
gi|229435766|gb|EEO45843.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392630013|gb|EIY24015.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|392641453|gb|EIY35229.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
Length = 463
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 14/117 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IEDC G D I++KSG DE G + P+ ++ +R ++ + VA GSE+
Sbjct: 264 SCRNVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRHCRMKDGH-AGVAIGSEV 322
Query: 61 SGGISNVQVEKIHL----YDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
+GG NV VE + D + I ++ RGG ++ I I N+ G C
Sbjct: 323 TGGCRNVWVENCTMDSPELDRI--IRIKSNAMRGGEVENIFIR-------NIRVGEC 370
>gi|145332593|ref|NP_001078162.1| polygalacturonase [Arabidopsis thaliana]
gi|332642198|gb|AEE75719.1| polygalacturonase [Arabidopsis thaliana]
Length = 452
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 28/227 (12%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+S NV I+DCIIA G D I++ SG T+++HI + G ++ GS
Sbjct: 191 ASSNVVIQDCIIATGDDCIAINSG-----------TSNIHISGI--DCGPGHGISIGSLG 237
Query: 61 SGG----ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN--VAFGACG 114
G + NV V+ + ++NG +T +G GY + I + L N+ +
Sbjct: 238 KDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQFY 297
Query: 115 NCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAG-NFTGIQEAPFANICLSNISLLI-- 171
N G + + + ++ F + IGT+ + G +F + P I L ++ +
Sbjct: 298 NGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGVDFRCSERVPCTEIFLRDMKIETAS 357
Query: 172 -NPGSYNSWECSNIHGSSESVFPE-PCPELENSSSNSS----STCFS 212
G +C N+ G+S P C EL +S+ TC S
Sbjct: 358 SGSGQVAQGQCLNVRGASTIAVPGLECLELSTDMFSSAQLLEQTCMS 404
>gi|414873518|tpg|DAA52075.1| TPA: hypothetical protein ZEAMMB73_445912 [Zea mays]
Length = 436
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 16/204 (7%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEM 60
S +V + DC I G D +S+++G T ++H+ +V G S+ + G +
Sbjct: 244 SKDVRVTDCKIKTGDDCMSIENG-----------THNLHVSKVNCGPGHGISIGSLGDDN 292
Query: 61 SGG-ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
S +S + ++ + L+ + NG +T +G GY K I + +Y++ N
Sbjct: 293 SRAEVSGITIDSVQLHGTTNGARIKTYQGGSGYAKDITFQNMVMYDVKNPIIIDQNYCDK 352
Query: 120 PDDDFDPDALPAIDQITFKDIIGTNITI-AGNFTGIQEAPFANICLSNISLLINPGSYNS 178
+ ++ + + FK+I GT T A + P I L NI L + G N+
Sbjct: 353 AKPCGEQESAVQVSGVVFKNIRGTTSTKDAIKMNCSENVPCQGITLQNIDLKMQDGKGNT 412
Query: 179 WE-CSNIHGSS-ESVFPEPCPELE 200
C N + +V P+PC ++
Sbjct: 413 RSTCQNAKWTEFGTVRPQPCTAIK 436
>gi|393787524|ref|ZP_10375656.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
gi|392658759|gb|EIY52389.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 12/116 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG + G + P+ ++ +R +++ G V GSE+
Sbjct: 269 SCKNVLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCKMKNGHG-GVVIGSEI 327
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
SGG N+ VE + DS N I +T+ RGG I+ + + N+ G C
Sbjct: 328 SGGYRNLFVENCQM-DSPNLDRVIRIKTSTCRGGIIENVFVR-------NITVGQC 375
>gi|194015552|ref|ZP_03054168.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
gi|194012956|gb|EDW22522.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
Length = 463
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IEDC G D I++KSG +E G G P+ ++ IRR ++ G V GSE+
Sbjct: 268 SCRNVLIEDCYFDNGDDCIAIKSGRNEDGRRIGIPSENIVIRRNEMRDGHG-GVTIGSEI 326
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQI 96
SGG+ + E ++ DS N + +T RGG I+ I
Sbjct: 327 SGGVRYIYAEN-NVMDSPNLDRALRIKTNSVRGGTIEHI 364
>gi|18400876|ref|NP_566524.1| polygalacturonase [Arabidopsis thaliana]
gi|75311636|sp|Q9LW07.1|PGLR3_ARATH RecName: Full=Probable polygalacturonase At3g15720; Short=PG;
AltName: Full=Pectinase At3g15720; Flags: Precursor
gi|11994344|dbj|BAB02303.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332642197|gb|AEE75718.1| polygalacturonase [Arabidopsis thaliana]
Length = 456
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 28/227 (12%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+S NV I+DCIIA G D I++ SG T+++HI + G ++ GS
Sbjct: 195 ASSNVVIQDCIIATGDDCIAINSG-----------TSNIHISGI--DCGPGHGISIGSLG 241
Query: 61 SGG----ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN--VAFGACG 114
G + NV V+ + ++NG +T +G GY + I + L N+ +
Sbjct: 242 KDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQFY 301
Query: 115 NCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAG-NFTGIQEAPFANICLSNISLLI-- 171
N G + + + ++ F + IGT+ + G +F + P I L ++ +
Sbjct: 302 NGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGVDFRCSERVPCTEIFLRDMKIETAS 361
Query: 172 -NPGSYNSWECSNIHGSSESVFPE-PCPELENSSSNSS----STCFS 212
G +C N+ G+S P C EL +S+ TC S
Sbjct: 362 SGSGQVAQGQCLNVRGASTIAVPGLECLELSTDMFSSAQLLEQTCMS 408
>gi|237721252|ref|ZP_04551733.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
gi|229449048|gb|EEO54839.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
Length = 487
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ +E+C + D I +K+G D G+ RPT +V +R + + +G + GSE
Sbjct: 252 SSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAG-LLTCGSET 310
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAE 102
SG I NV + Y + + + +++ RGG ++ I ++ E
Sbjct: 311 SGSIRNVLAHDLIAYGTGSVLRLKSSMNRGGTVENIYVTGVE 352
>gi|399032135|ref|ZP_10731774.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069546|gb|EJL60896.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 449
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIA-YGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+ +V IE+ G D I++K+G D G A P+ ++ IR + G V GSEM
Sbjct: 253 AKDVLIENVTFNNGDDNIAIKAGRDHEGRANSATPSENIIIRNCNFKGLHG--VVIGSEM 310
Query: 61 SGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIKQIVISDAEL 103
S G+ NV VE L GI +T RGG+IK + + + +L
Sbjct: 311 SAGVQNVYVENCKTVGYLKRGIYLKTNADRGGFIKNVFVRNIQL 354
>gi|423301906|ref|ZP_17279929.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
gi|408470997|gb|EKJ89529.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
Length = 489
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ +E+C + D I +K+G D G+ RPT +V IR + +G V GSE
Sbjct: 254 SSTNILVENCEVDCNDDNICIKAGRDADGLRVNRPTENVVIRNCTARKGAG-LVTCGSET 312
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAE 102
SG I NV + Y + + +++ RGG ++ I ++ +
Sbjct: 313 SGSIRNVLAYDLKAYGTGAALRLKSSMNRGGTVENIYMTRVK 354
>gi|293369336|ref|ZP_06615921.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|299148480|ref|ZP_07041542.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|336404082|ref|ZP_08584781.1| hypothetical protein HMPREF0127_02094 [Bacteroides sp. 1_1_30]
gi|292635503|gb|EFF54010.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|295086728|emb|CBK68251.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|298513241|gb|EFI37128.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|335943733|gb|EGN05568.1| hypothetical protein HMPREF0127_02094 [Bacteroides sp. 1_1_30]
Length = 487
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ +E+C + D I +K+G D G+ RPT +V +R + + +G + GSE
Sbjct: 252 SSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAG-LLTCGSET 310
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAE 102
SG I NV + Y + + + +++ RGG ++ I ++ E
Sbjct: 311 SGSIRNVLAHDLIAYGTGSVLRLKSSMNRGGTVENIYVTGVE 352
>gi|383114418|ref|ZP_09935182.1| hypothetical protein BSGG_1410 [Bacteroides sp. D2]
gi|313693875|gb|EFS30710.1| hypothetical protein BSGG_1410 [Bacteroides sp. D2]
Length = 487
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ IE+C + D I +K+G D G+ RPT +V +R + + +G + GSE
Sbjct: 252 SSTNILIENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAG-LLTCGSET 310
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVIS 99
SG I NV + Y + + +++ RGG ++ I ++
Sbjct: 311 SGSIRNVLAHDLTAYGTGTTLRLKSSMNRGGTVENIYMT 349
>gi|389574386|ref|ZP_10164450.1| glycoside hydrolase [Bacillus sp. M 2-6]
gi|388425994|gb|EIL83815.1| glycoside hydrolase [Bacillus sp. M 2-6]
Length = 463
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +V IEDC G D I++KSG +E G G P+ ++ IRR ++ G V GSE+
Sbjct: 268 SCRHVLIEDCYFDNGDDCIAIKSGRNEDGRRIGVPSENIVIRRNTMRDGHG-GVTIGSEI 326
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQI 96
SGG+ V E ++ DS N + +T RGG I+ I
Sbjct: 327 SGGVKYVYAED-NVMDSPNLDRALRIKTNSVRGGTIEHI 364
>gi|146301983|ref|YP_001196574.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156401|gb|ABQ07255.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 448
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIA-YGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+ +V IE+ G D +++K+G D G A P+ ++ IR + G V GSEM
Sbjct: 250 AKDVLIENVTFDNGDDNVAIKAGRDHEGRANTASPSENIVIRNCNFKGLHG--VVIGSEM 307
Query: 61 SGGISNVQVEKIHLYDSLN-GIEFRTTKGRGGYIKQIVISDAEL 103
S G+ NV VE L GI +T RGGYIK + + + +L
Sbjct: 308 SAGVQNVFVENCKTAGYLKRGIYLKTNADRGGYIKNVFVQNLQL 351
>gi|262408433|ref|ZP_06084980.1| glycoside hydrolase family 28 [Bacteroides sp. 2_1_22]
gi|294643092|ref|ZP_06720926.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808960|ref|ZP_06767684.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508645|ref|ZP_08788271.1| glycoside hydrolase family 28 [Bacteroides sp. D1]
gi|262353985|gb|EEZ03078.1| glycoside hydrolase family 28 [Bacteroides sp. 2_1_22]
gi|292641551|gb|EFF59735.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294443841|gb|EFG12584.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345455055|gb|EEO51472.2| glycoside hydrolase family 28 [Bacteroides sp. D1]
Length = 487
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ +E+C + D I +K+G D G+ RPT +V +R + + +G + GSE
Sbjct: 252 SSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPTENVVVRNCIARKGAG-LLTCGSET 310
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAE 102
SG I NV + Y + + + +++ RGG ++ I ++ E
Sbjct: 311 SGSIRNVLAHDLIAYGTGSVLRLKSSMNRGGTVENIYVTGVE 352
>gi|298482095|ref|ZP_07000283.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271652|gb|EFI13225.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 511
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ IE+C + D I +KSG D G+ PT +V IR + + +G + GSE
Sbjct: 262 SSTNILIENCDVDCNDDNICIKSGRDADGLRVNLPTENVVIRNCIARKGAG-LITCGSET 320
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA 112
SG I N+ + + + ++ RGG I+ I ++D + N+ A
Sbjct: 321 SGSIRNILGYNLQAVGTSAVLRLKSAMNRGGTIENIYMTDVKAENVRHVLAA 372
>gi|129937|sp|P27644.1|PGLR_RHIRD RecName: Full=Polygalacturonase; AltName: Full=PGL; AltName:
Full=Pectinase
gi|142256|gb|AAA22102.1| PGL ORF [Agrobacterium tumefaciens]
Length = 312
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 21/178 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGW-----DEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 55
S NV I ++G D I++K+G ++ +A R T +R L+Q G V
Sbjct: 79 SCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGIT---VRHCLMQPGHGGLV- 134
Query: 56 FGSEMSGGISNVQVEKIHLYDSLNGIEFRT-TKGRGGYIKQIVISDAELYNINVAFGACG 114
GSEMSGG+ +V VE + + G+ +T + GG + I + L + A A
Sbjct: 135 IGSEMSGGVHDVTVEDCDMIGTDRGLRLKTGARSGGGMVGNITMRRVLLDGVQTALSANA 194
Query: 115 --NCGSHPDDDF----DP----DALPAIDQITFKDIIGTNIT-IAGNFTGIQEAPFAN 161
+C + DD+ +P D P +D IT +D+ N+ AG F G+ + P A
Sbjct: 195 HYHCDADGHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAAGVFLGLPDVPSAT 252
>gi|325299708|ref|YP_004259625.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319261|gb|ADY37152.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 468
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE+C G D I++KSG +E G + P+ ++ +R +++ G V GSE+
Sbjct: 269 SCKNVLIENCRFDTGDDCIAIKSGRNEDGRKWNIPSENIVVRNCEMKNGHG-GVVIGSEI 327
Query: 61 SGGISNVQVEKIHL----YDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVA 109
SGG N+ VE + D + I +T+ RGG I+ + + + ++ N A
Sbjct: 328 SGGYRNLYVEDCVMDSPQLDRV--IRIKTSTCRGGVIENVFVRNIKVGQCNEA 378
>gi|224536297|ref|ZP_03676836.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522091|gb|EEF91196.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
Length = 473
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 23/201 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS+ + +++ I D LK+G D G+ RP V IR + S G GSE
Sbjct: 246 SSEYILVQNANINCNDDNFCLKAGRDSDGLRVNRPCQYVVIRDCV-AGSGGGMFTCGSET 304
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG--- 117
SGGI N+ ++ + G+ F++T RGG I+ I + D E+ + F N
Sbjct: 305 SGGIRNIVAYRMKGVGTKCGLRFKSTCQRGGVIEDIYLYDIEMIGVERPFVVDLNWNPAY 364
Query: 118 --SHPDDDFDPDALP----------AIDQ-------ITFKDIIGTNITIAGNFTGIQEAP 158
S +D + +P +++Q +T ++ +N N GI +
Sbjct: 365 SISKLPKGYDMEKIPVYWSKMLESVSLEQGTPVFRNVTLDNVTASNARTCMNVVGIANSK 424
Query: 159 FANICLSNISLLINPGSYNSW 179
N L N+ + N W
Sbjct: 425 IENFILRNVCIEGNKAGKIIW 445
>gi|336404047|ref|ZP_08584748.1| hypothetical protein HMPREF0127_02061 [Bacteroides sp. 1_1_30]
gi|295086699|emb|CBK68222.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|335943763|gb|EGN05595.1| hypothetical protein HMPREF0127_02061 [Bacteroides sp. 1_1_30]
Length = 511
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ IE+C + D I +KSG D G+ PT ++ IR + + +G + GSE
Sbjct: 262 SSTNILIENCDVDCNDDNICIKSGRDADGLRVNLPTENIVIRNCIARKGAG-LITCGSET 320
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA 112
SG I N+ + + + ++ RGG I+ I ++D + N+ A
Sbjct: 321 SGSIRNILGYNLQAVGTSAVLRLKSAMNRGGTIENIYMTDVKAENVRHVLAA 372
>gi|242037695|ref|XP_002466242.1| hypothetical protein SORBIDRAFT_01g004220 [Sorghum bicolor]
gi|241920096|gb|EER93240.1| hypothetical protein SORBIDRAFT_01g004220 [Sorghum bicolor]
Length = 452
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 25/206 (12%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEM 60
S++V + +C I G D +S++SG T ++H+ +V+ G S+ + G +
Sbjct: 257 SNDVQVTNCKIKTGDDCLSIESG-----------THNLHVSQVVCGPGHGISIGSLGDDN 305
Query: 61 SGG-ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
S +S + ++ + LY + NG +T +G GY K I + +Y++ N +
Sbjct: 306 SRAEVSGITIDSVQLYGTTNGARIKTYQGGSGYAKDITFQNMVMYDVANPIIIDQN---Y 362
Query: 120 PDDDFDPDALPA----IDQITFKDIIGTNITI-AGNFTGIQEAPFANICLSNISLLI--- 171
D P L + + FK+I GT +T A + P I L NI+L +
Sbjct: 363 CDKATAPCELQGSAVEVSNVVFKNIKGTTVTKDAIMLNCSRNVPCLGITLQNINLRMQGS 422
Query: 172 NPGSYNSWECSNIH-GSSESVFPEPC 196
N C N S +V P+PC
Sbjct: 423 NGKDAAESTCQNARWRKSGTVLPQPC 448
>gi|150002789|ref|YP_001297533.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149931213|gb|ABR37911.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 494
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 77/196 (39%), Gaps = 25/196 (12%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ IE+C + D I LK+G D G+ RPT ++ +R + + +G + GSE
Sbjct: 254 SSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPTENIIVRGCIARKGAG-LITCGSET 312
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG--- 117
SG I NV + Y + + + ++ RGG ++ I ++ ++ A N
Sbjct: 313 SGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVENIYMTQVTADHVRHVLAADLNWNPSY 372
Query: 118 ---------------SHPDDDFDP-----DALPAIDQITFKDIIGTNITIAGNFTGI-QE 156
H P P + D+ TN+ I G +E
Sbjct: 373 SYSTLPAEYEGKEIPEHWKVMLTPVTPKEKGYPHFRNVWLSDVKATNVQIFITAAGWNEE 432
Query: 157 APFANICLSNISLLIN 172
P N +S I +N
Sbjct: 433 LPLQNFHISGIKAKVN 448
>gi|262408402|ref|ZP_06084949.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294647547|ref|ZP_06725126.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807593|ref|ZP_06766388.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508616|ref|ZP_08788242.1| glycoside hydrolase family 28 [Bacteroides sp. D1]
gi|262353954|gb|EEZ03047.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292637115|gb|EFF55554.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294445208|gb|EFG13880.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345455044|gb|EEO51505.2| glycoside hydrolase family 28 [Bacteroides sp. D1]
Length = 511
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ IE+C + D I +KSG D G+ PT ++ IR + + +G + GSE
Sbjct: 262 SSTNILIENCDVDCNDDNICIKSGRDADGLRVNLPTENIVIRNCIARKGAG-LITCGSET 320
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA 112
SG I N+ + + + ++ RGG I+ I ++D + N+ A
Sbjct: 321 SGSIRNILGYNLQAVGTSAVLRLKSAMNRGGTIENIYMTDVKAENVRHVLAA 372
>gi|421725056|ref|ZP_16164257.1| glycoside hydrolase [Klebsiella oxytoca M5al]
gi|410374138|gb|EKP28818.1| glycoside hydrolase [Klebsiella oxytoca M5al]
Length = 460
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 29/155 (18%)
Query: 49 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV 108
G ++ GSE +GG++NV+VE S+ GI ++ +G+GG +K IV + ++N+ V
Sbjct: 273 KQGRGISIGSESAGGVNNVRVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNVEV 332
Query: 109 --AFGACGNCG--------------------------SHPDDDFDPDALPAIDQITFKDI 140
F A S P FD P IT +++
Sbjct: 333 PLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDKYKTPHFSNITVENL 392
Query: 141 IGTNITIAGNF-TGIQEAPFANICLSNISLLINPG 174
T + A + G EAP + SN+++ + G
Sbjct: 393 TSTGDSKAAAYIIGTPEAPLSGFHFSNVNIEADRG 427
>gi|28411800|dbj|BAC57275.1| putative polygalacturonase precursor [Oryza sativa Japonica Group]
Length = 405
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 18/201 (8%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEM 60
S +V + DC+I G D +S++ G T ++H++ ++ G S+ + G
Sbjct: 213 SRDVEVTDCMIKTGDDCMSIEDG-----------TENLHVKNMVCGPGHGISIGSLGDHN 261
Query: 61 S-GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-NVAFGACGNCGS 118
S ++NV V+ + LY + NG +T +G G K IV + + N+ N C S
Sbjct: 262 SEAHVNNVTVDNVRLYGTANGARIKTWQGGKGSAKNIVFQNMVMDNVWNPIIIDQNYCDS 321
Query: 119 HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEA-PFANICLSNISLLINPGSYN 177
A+ + + FK+I GT+ + + P I L N++L + GS N
Sbjct: 322 STPCKQQKSAV-EVSNVLFKNIRGTSASEEAIMLHCSSSVPCHGITLENVNLTVKGGSSN 380
Query: 178 SWE-CSNIH-GSSESVFPEPC 196
+ C N S SV P+PC
Sbjct: 381 AKSTCQNAEWKKSGSVSPQPC 401
>gi|182416708|ref|ZP_02948108.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237667049|ref|ZP_04527033.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379433|gb|EDT76927.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237655397|gb|EEP52953.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 511
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 33/187 (17%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S ++ IEDC G D I++KSG + G G P+ ++ IR + G + GSE+
Sbjct: 294 SCKDMIIEDCHFTTGDDCIAIKSGRNNEGRNIGVPSQNIIIRNNKFEDGHG-GITIGSEI 352
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGG-----YIKQIVISDAELYNINVAF-- 110
SGG++++ + +DS I F+T RGG Y+K V++ +++ I+ F
Sbjct: 353 SGGVNDIFAHD-NYFDSSELDYPIRFKTNAERGGKLENIYVKNSVVNKSKIAVIHADFFY 411
Query: 111 --GACGNCGSHPDDDFDPDALPAIDQITF---KDIIGTNITIAGN---FTGIQEAPFANI 162
G GN +P + IT K + G +I A N G ++AP NI
Sbjct: 412 EEGTNGNY------------MPILRNITLSNIKTVEGGSID-ANNALFLKGFKDAPIENI 458
Query: 163 CLSNISL 169
+ ++ L
Sbjct: 459 LIEDVYL 465
>gi|410684707|ref|YP_006060714.1| Polygalacturonase [Ralstonia solanacearum CMR15]
gi|299069196|emb|CBJ40456.1| Polygalacturonase [Ralstonia solanacearum CMR15]
Length = 683
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
NV ED G D I++KSG YG P D IR ++ S G + GSEM GG
Sbjct: 412 NVLCEDMTFNTGDDCIAIKSG-KNLDTGYG-PAQDHVIRNCIMNSGHGG-ITLGSEMGGG 468
Query: 64 ISNVQVEKIHLY------DSLN-GIEFRTTKGRGGYIKQIVISDAELYN 105
+ + + + D LN I +T RGGY++ I D L N
Sbjct: 469 VQRIYARNLTMRNAFYATDPLNIAIRIKTNMNRGGYVRDFYIDDVTLPN 517
>gi|423106873|ref|ZP_17094568.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
gi|376388999|gb|EHT01691.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
Length = 460
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 29/155 (18%)
Query: 49 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV 108
G ++ GSE +GG++NV VE S+ GI ++ +G+GG +K IV S+ ++N+ V
Sbjct: 273 KQGRGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYSNTRMHNVEV 332
Query: 109 --AFGACGNCG--------------------------SHPDDDFDPDALPAIDQITFKDI 140
F A S P FD P IT +++
Sbjct: 333 PLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDKYKTPHFSNITVENL 392
Query: 141 IGTNITIAGNF-TGIQEAPFANICLSNISLLINPG 174
T + A + G EAP + SN+++ + G
Sbjct: 393 TSTGDSKAAAYIIGTPEAPLSGFHFSNVNIEADRG 427
>gi|325298060|ref|YP_004257977.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324317613|gb|ADY35504.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 462
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 9/171 (5%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
+ N+ IE+ G D +++K G D G RP+ ++ IR + G V GSEMS
Sbjct: 257 TRNLLIENIEFNNGDDNVAIKCGRDNDGWTTARPSENIIIRNCKFKGLHG--VVLGSEMS 314
Query: 62 GGISNVQVEKIHLYDSL--NGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
G+ NV +E Y GI +T RGG+I+ I +++ + F A +
Sbjct: 315 AGVQNVFIENC-TYGGYCKRGIYIKTNPDRGGFIRNIYVNNCRFGEVEDLFYA---TSMY 370
Query: 120 PDDDFDPDALPAIDQITFKDIIGTNITIAG-NFTGIQEAPFANICLSNISL 169
+ D + I KD+ + A G P N+ N+++
Sbjct: 371 AGEGMDNTHFTEVHDIYVKDVTCQKASAAALVLQGTTVKPIYNVRFENVNV 421
>gi|182415146|ref|YP_001820212.1| galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
gi|177842360|gb|ACB76612.1| Galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
Length = 478
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 15/171 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S N I C I G D I +KSG T++ I +++ G ++ GSE
Sbjct: 285 SVTNAWIHHCDIDTGDDNIVIKSG-----------GTNILIEDCVIKHGHG--ISIGSET 331
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN--VAFGACGNCGS 118
+ G+ N+ V + + NGI ++ +G GG ++ I + + ++ + +
Sbjct: 332 TEGVRNMLVRRCSFDGTDNGIRIKSMRGAGGVVENIRYTGITMKDVENAIVLDLTYTDNN 391
Query: 119 HPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
P+ DP +P I I + T AG G+ ++P + + L ++++
Sbjct: 392 RPNFRGDPTKIPVIRDILIDHVTVTGSLKAGKIVGLPDSPISGVTLRDVTI 442
>gi|373956691|ref|ZP_09616651.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373893291|gb|EHQ29188.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 474
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 85/195 (43%), Gaps = 24/195 (12%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS V I++C I D LK+G D G+ +PT V IR + + G + GSE
Sbjct: 245 SSTYVLIQNCDIDCNDDDFCLKAGRDWDGLRVNKPTEYVVIRYCI-SRAGGGLLTLGSET 303
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG--- 117
SGGI +V + + NG+ ++ RGG ++ I + + NI A N
Sbjct: 304 SGGIRHVLATNLSGNGTGNGLNIKSATTRGGTVEDIHFKNITMNNIGNAIQITMNWNPAY 363
Query: 118 --SHPDDDFDPDALPA-----IDQI--------TFKDIIGTNITIAG-----NFTGIQEA 157
S D +D + +PA + + TFKD+ +NI I G N G+Q
Sbjct: 364 SYSKLPDGYDINTVPAHWKKMLTHVEPAEKGIPTFKDVYISNINIKGAKKAINAVGMQGH 423
Query: 158 PFANICLSNISLLIN 172
P SN+++ N
Sbjct: 424 PLVGFHFSNVNIEAN 438
>gi|423221752|ref|ZP_17208222.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392645616|gb|EIY39340.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 461
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +NV IEDC G D I++KSG DE G + P+ ++ +R ++ + VA GSE+
Sbjct: 264 SCNNVLIEDCDFDTGDDCIAIKSGRDEDGRFWNIPSENIIVRNCRMKDGH-AGVAIGSEV 322
Query: 61 SGGISNVQVEKIHL----YDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
+GG NV VE + D + I ++ RGG ++ + + N+ G C
Sbjct: 323 TGGCRNVWVENCRMDSPELDRI--IRIKSNAIRGGEVENLFVR-------NIFVGEC 370
>gi|227537594|ref|ZP_03967643.1| possible glycosyl hydrolase, partial [Sphingobacterium spiritivorum
ATCC 33300]
gi|227242543|gb|EEI92558.1| possible glycosyl hydrolase [Sphingobacterium spiritivorum ATCC
33300]
Length = 214
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS + I++ I D +KSG D G+ RPT V I + + G + FGSE
Sbjct: 67 SSKWIRIQNADIDCNDDNFCIKSGRDWDGLRVNRPTEYVLITDCISRKGDGL-ITFGSET 125
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGN 115
SGG+ ++ + + + GI ++ + RGG ++ I++ + ++ ++ AF N
Sbjct: 126 SGGMRHIIARNLKAHGTKVGIRLKSARNRGGVVEDILLENIQMDSVRTAFEVTPN 180
>gi|375150362|ref|YP_005012803.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
gi|361064408|gb|AEW03400.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
Length = 532
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 5 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGI 64
V +++ + G D I +KSG DE G G+ + ++I ++ + G V GSEMSGG
Sbjct: 272 VEVKNSTLDCGDDGICIKSGKDEEGRKAGKASQYIYIHDNVVYKAHGGFV-IGSEMSGGA 330
Query: 65 SNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI 106
++ V + G+ F+T +GRGG ++ I I + + +I
Sbjct: 331 HDIFVTNCSFIGTDVGLRFKTQRGRGGVVENIYIKNISMRDI 372
>gi|407791858|ref|ZP_11138936.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
gi|407198911|gb|EKE68937.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
Length = 495
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 17/171 (9%)
Query: 3 DNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSG 62
D+V IE C G D I++KSG +E G G+ ++ +R ++ G V GSE+SG
Sbjct: 297 DHVVIEGCTFDTGDDCIAIKSGRNEDGRRVGQACRNLVVRNCQMKDGHGGLV-LGSEISG 355
Query: 63 GISNVQVEKIHL--YDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVA-----FGACGN 115
G+ NV ++ + + +T RGG I+ I I + + + A F G
Sbjct: 356 GVYNVFLDNCQMDSPELERAFRIKTNARRGGTIEGIRIRNLRVGEVKDAVSINFFYEEGQ 415
Query: 116 CGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
G LP + I +++ + A G AP + LSN
Sbjct: 416 EGRF---------LPEVRDIHIDNLVVRSAQRAFYLRGFASAPIEGVTLSN 457
>gi|294777281|ref|ZP_06742736.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294448901|gb|EFG17446.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 494
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ IE+C + D I LK+G D G+ RPT ++ +R + + +G + GSE
Sbjct: 254 SSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPTENIIVRGCIARKGAG-LITCGSET 312
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVIS 99
SG I NV + Y + + + ++ RGG ++ I ++
Sbjct: 313 SGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVENIYMT 351
>gi|423315477|ref|ZP_17293405.1| hypothetical protein HMPREF1058_04017 [Bacteroides vulgatus
CL09T03C04]
gi|392679280|gb|EIY72666.1| hypothetical protein HMPREF1058_04017 [Bacteroides vulgatus
CL09T03C04]
Length = 494
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ IE+C + D I LK+G D G+ RPT ++ +R + + +G + GSE
Sbjct: 254 SSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPTENIIVRGCIARKGAG-LITCGSET 312
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVIS 99
SG I NV + Y + + + ++ RGG ++ I ++
Sbjct: 313 SGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVENIYMT 351
>gi|383120489|ref|ZP_09941217.1| parallel beta-helix [Bacteroides sp. 1_1_6]
gi|251840459|gb|EES68541.1| parallel beta-helix [Bacteroides sp. 1_1_6]
Length = 506
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ IE+C + D I +KSG D G+ RPT +V +R + +G + GSE
Sbjct: 257 SSCNILIENCDVDCNDDNICIKSGRDADGLRVNRPTENVVVRNCTARKGAG-LITCGSET 315
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA 112
SG I NV + + + ++ RGG I+ I ++ N+ A
Sbjct: 316 SGSIRNVLGYDLKAVGTYTVLRLKSAMNRGGTIENIYMTRVSAENVRQVLAA 367
>gi|319643143|ref|ZP_07997773.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520565|ref|ZP_08799952.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254835085|gb|EET15394.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317385221|gb|EFV66170.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 494
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ IE+C + D I LK+G D G+ RPT ++ +R + + +G + GSE
Sbjct: 254 SSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPTENIIVRGCIARKGAG-LITCGSET 312
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVIS 99
SG I NV + Y + + + ++ RGG ++ I ++
Sbjct: 313 SGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVENIYMT 351
>gi|451820152|ref|YP_007456353.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451786131|gb|AGF57099.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 506
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 19/180 (10%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S ++ IE+C G D I++KSG + G G PT+++ IR + G + GSE+
Sbjct: 294 SCKDMIIENCYFLTGDDCIAIKSGRNNEGRNIGIPTSNIIIRNNEFKDGHG-GITIGSEI 352
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVA------FG 111
SGG++N+ + +DS I F+T RGG ++ I I ++ + VA F
Sbjct: 353 SGGVNNI-FGHDNYFDSEELDYPIRFKTNAERGGLLENIYIKNSTVNKSKVAVIHADFFY 411
Query: 112 ACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITI--AGNFTGIQEAPFANICLSNISL 169
G G+H L I K + G +I A G ++AP NI + + L
Sbjct: 412 EEGTNGNH------KPILRNIALSNIKTVDGGSIDAKNALYLKGFEDAPIENILIEDALL 465
>gi|298383805|ref|ZP_06993366.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263409|gb|EFI06272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 506
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ IE+C + D I +KSG D G+ RPT +V +R + +G + GSE
Sbjct: 257 SSCNILIENCDVDCNDDNICIKSGRDADGLRVNRPTENVVVRNCTARKGAG-LITCGSET 315
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA 112
SG I NV + + + ++ RGG I+ I ++ N+ A
Sbjct: 316 SGSIRNVLGYDLKAVGTYTVLRLKSAMNRGGTIENIYMTRVSAENVRQVLAA 367
>gi|431798433|ref|YP_007225337.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789198|gb|AGA79327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 477
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 12/189 (6%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS NV I+DC G D I++KSG + G P+ ++ I+ + G V GSE+
Sbjct: 279 SSKNVLIKDCYFNTGDDCIAIKSGRNADGRRINVPSENIIIQNCKMADGHG-GVVIGSEI 337
Query: 61 SGGISNVQVEKIHLYDSL--NGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS 118
SGG+ NV E + + +T+ RGG +I D L NI+V A
Sbjct: 338 SGGVRNVFAENCEMNSPHLDRALRIKTSSMRGG-----IIEDIYLRNIDVGQIAQQVVRV 392
Query: 119 HPDDDFDPDALPAIDQITFKDIIGTNITIAGN-FTGIQEAPFANICLSNISLLINPGSYN 177
+ + +P + I +++ N G G + +P NI L N+++ +
Sbjct: 393 NMFYEDSGAYVPTVRNIHVENMTVENGGKVGVLLEGYENSPVENITLENVNI---KNAEE 449
Query: 178 SWECSNIHG 186
++ SN+ G
Sbjct: 450 AYTFSNVKG 458
>gi|17549054|ref|NP_522394.1| polygalacturonase transmembrane protein [Ralstonia solanacearum
GMI1000]
gi|17431305|emb|CAD17984.1| polygalacturonase transmembrane protein [Ralstonia solanacearum
GMI1000]
gi|219566923|dbj|BAH04954.1| polygalacturonase [Ralstonia solanacearum]
Length = 680
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
NV ED G D I++KSG YG P D IR ++ S G + GSEM GG
Sbjct: 409 NVLCEDMTFNTGDDCIAIKSG-KNLDTGYG-PAQDHVIRNCIMNSGHGG-ITLGSEMGGG 465
Query: 64 ISNVQVEKIHLY------DSLN-GIEFRTTKGRGGYIKQIVISDAELYN 105
+ + + + D LN I +T RGGY++ + D L N
Sbjct: 466 VQRIYARNLTMRNAFYATDPLNIAIRIKTNMNRGGYVRDFYVDDVTLPN 514
>gi|116623151|ref|YP_825307.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226313|gb|ABJ85022.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 436
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V + C I DAI LK+G D G+ PT V I +++ + + V GSE
Sbjct: 218 SSSDVLVAHCDIDCNDDAICLKAGRDADGLRVNLPTERVRITDNVVRGGA-AGVTIGSET 276
Query: 61 SGGISNVQVEKIHLYDSL-NGIEFRTTKGRGGYIKQIVISD 100
SGGI +++V+ + + ++ GI F++ RGG I+ I I +
Sbjct: 277 SGGIRHIEVDHLTVMSAVPAGILFKSASTRGGTIEDIAIRN 317
>gi|421083085|ref|ZP_15543964.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
gi|401702311|gb|EJS92555.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
Length = 460
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 29/155 (18%)
Query: 49 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV 108
G ++ GSE SGG++NV VE S+ GI +T +G+GG +K I + ++ ++ +
Sbjct: 273 KQGRGISIGSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEI 332
Query: 109 --AFGACGNCG--------------------------SHPDDDFDPDALPAIDQITFKDI 140
F A + P+ FD P +T +++
Sbjct: 333 PLVFAAYYKAAPIVQAEVDKMLAEGGFTMGEQIYPSDTDPEQPFDQHKTPHFSNVTIENL 392
Query: 141 IGTNITIAGNF-TGIQEAPFANICLSNISLLINPG 174
T T A + G+ EAP + N+ + + G
Sbjct: 393 ESTGKTKAAAYIIGVPEAPLSGFHFDNVRIDADKG 427
>gi|410664607|ref|YP_006916978.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
gi|409026964|gb|AFU99248.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
Length = 466
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 13/171 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IE C+ G D I+LKSG +E G G +V +R ++ G V GSE+
Sbjct: 279 SCKNVLIEQCVFDTGDDCIALKSGRNEDGRRVGVAVENVVVRHCEMRDGHGGLV-LGSEI 337
Query: 61 SGGISNVQVEKI-----HLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGN 115
SGG N+ +E HL +L F+T RGG I+++ + + A
Sbjct: 338 SGGARNIFMEHCSMNSPHLERALR---FKTNARRGGVIEKVRVRHVHIQQAQEAL----V 390
Query: 116 CGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
H ++ + +P + I +D+ + + G P I L
Sbjct: 391 VNFHYEEGEAGEHMPTVRDILVEDLRCDQVERVFHLRGFAHNPVGAITLRR 441
>gi|357114979|ref|XP_003559271.1| PREDICTED: polygalacturonase-like [Brachypodium distachyon]
Length = 403
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEM 60
S +V + DC+I G D +S++ G T ++H+ +V+ G S+ + G +
Sbjct: 211 SKDVQVRDCVIRTGDDCMSIEDG-----------THNLHVTKVVCGPGHGISIGSLGDDN 259
Query: 61 SGG-ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
S +S + ++ + LY + NG +T +G GY K IV + + N+ N
Sbjct: 260 SRAEVSGIYIDTVQLYGTTNGARIKTYQGGSGYAKDIVFQNIIMDNVQNPIIIDQNYCDS 319
Query: 120 PDDDFDPDALPAIDQITFKDIIGTNITI-AGNFTGIQEAPFANICLSNISLLINPGSYNS 178
+ ++ I + FK+I GT ++ A +I L NI L + G+ +
Sbjct: 320 AKPCKNQESAVEISNVVFKNIRGTTMSKDAIKLDCSNSDSCTDIVLENIDLKMEGGNGET 379
Query: 179 WE-CSNIH-GSSESVFPEPCPELEN 201
C N S +V P+PC E +N
Sbjct: 380 QSTCQNAKWRKSGNVTPQPC-EFKN 403
>gi|414873526|tpg|DAA52083.1| TPA: hypothetical protein ZEAMMB73_529440 [Zea mays]
Length = 475
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 21/208 (10%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEM 60
S +V + +C I G D +S++ G T +H+ V+ G SV + G +
Sbjct: 250 SKDVRVTNCKIKTGDDCMSIEDG-----------THGLHVSGVVCGPGHGISVGSLGDDD 298
Query: 61 SGG-ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN----VAFGACGN 115
S +S + ++ + L+ + NG +T +G GY + I + ++ + + C
Sbjct: 299 SRAEVSGITIDSVQLHGTTNGARIKTYQGGSGYARDITFQNMAMHGVRNPIVIDQSYCDR 358
Query: 116 CGSHPDDDFDPDALPAIDQITFKDIIGTNITI-AGNFTGIQEAPFANICLSNISLLINPG 174
+ P A+ I + F++I GT +T A + ++ P I L NI L + G
Sbjct: 359 AEAEPPCREQRSAV-QISDVVFRNIRGTTVTRDAIRMSCSRDVPCRGIVLQNIDLKMQGG 417
Query: 175 S-YNSWECSNIH-GSSESVFPEPCPELE 200
+ C N S V P+PC E
Sbjct: 418 KGHAESTCQNAKWRKSGKVVPQPCTSKE 445
>gi|238916395|ref|YP_002929912.1| glycoside hydrolase family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
gi|238871755|gb|ACR71465.1| Glycoside Hydrolase Family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
Length = 458
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S V I +C G DAI LKSG + P DV+I L+ G V GSEM
Sbjct: 259 SCKKVHIHNCTFETGDDAICLKSGKNAVARQIEGPCEDVYIHDCLVNEGHGGFV-IGSEM 317
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGG 91
S GI NV VE + G+ ++ GRGG
Sbjct: 318 SRGIKNVLVENCTFLGTDVGVRIKSALGRGG 348
>gi|300697434|ref|YP_003748095.1| Polygalacturonase [Ralstonia solanacearum CFBP2957]
gi|299074158|emb|CBJ53703.1| Polygalacturonase [Ralstonia solanacearum CFBP2957]
Length = 679
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
NV ED G D I++KSG YG P D IR ++ S G + GSEM GG
Sbjct: 408 NVLCEDMTFNTGDDCIAIKSG-KNLDTGYG-PAQDHVIRNCIMNSGHGG-ITLGSEMGGG 464
Query: 64 ISNVQVEKIHLY------DSLN-GIEFRTTKGRGGYIKQIVISDAELYN 105
+ + + + D LN I +T RGGY++ + D L N
Sbjct: 465 VQRIYARNLTMRNAFYATDPLNIAIRIKTNMNRGGYVRDFYVDDVMLPN 513
>gi|421898567|ref|ZP_16328933.1| polygalacturonase protein [Ralstonia solanacearum MolK2]
gi|206589773|emb|CAQ36734.1| polygalacturonase protein [Ralstonia solanacearum MolK2]
Length = 679
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
NV ED G D I++KSG YG P D IR ++ S G + GSEM GG
Sbjct: 408 NVLCEDMTFNTGDDCIAIKSG-KNLDTGYG-PAQDHVIRNCIMNSGHGG-ITLGSEMGGG 464
Query: 64 ISNVQVEKIHLY------DSLN-GIEFRTTKGRGGYIKQIVISDAELYN 105
+ + + + D LN I +T RGGY++ + D L N
Sbjct: 465 VQRIYARNLTMRNAFYATDPLNIAIRIKTNMNRGGYVRDFYVDDVMLPN 513
>gi|83748914|ref|ZP_00945924.1| PehC [Ralstonia solanacearum UW551]
gi|207739187|ref|YP_002257580.1| polygalacturonase protein [Ralstonia solanacearum IPO1609]
gi|83724413|gb|EAP71581.1| PehC [Ralstonia solanacearum UW551]
gi|206592560|emb|CAQ59466.1| polygalacturonase protein [Ralstonia solanacearum IPO1609]
Length = 678
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
NV ED G D I++KSG YG P D IR ++ S G + GSEM GG
Sbjct: 407 NVLCEDMTFNTGDDCIAIKSG-KNLDTGYG-PAQDHVIRNCIMNSGHGG-ITLGSEMGGG 463
Query: 64 ISNVQVEKIHLY------DSLN-GIEFRTTKGRGGYIKQIVISDAELYN 105
+ + + + D LN I +T RGGY++ + D L N
Sbjct: 464 VQRIYARNLTMRNAFYATDPLNIAIRIKTNMNRGGYVRDFYVDDVMLPN 512
>gi|383315603|ref|YP_005376445.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
gi|379042707|gb|AFC84763.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
Length = 441
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 9/174 (5%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+S +V I D I+ G D I++KSG + T DV I + L G SV GSE
Sbjct: 231 ASRHVRIRDSRISTGDDCIAIKSGLPGSRLP-AEATVDVRIDHLWLGRGHGLSV--GSET 287
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
GI V V + + G+ ++ + RG I I + + A P
Sbjct: 288 LFGIRGVDVRDVVFQGTDAGVRIKSGRDRGNRISDIHFRHLRMKGVGTAISVLAYY-PKP 346
Query: 121 DDDFDPD-----ALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
+ DP P I ++ D+ +AG G+ E+P I L ++SL
Sbjct: 347 APEQDPAQAVTATTPWISDVSVTDVQAEGSRVAGLLIGLPESPLRGIRLGHLSL 400
>gi|414873520|tpg|DAA52077.1| TPA: hypothetical protein ZEAMMB73_569322 [Zea mays]
Length = 441
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 16/200 (8%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEM 60
S +V + DC I G D +S+++G T ++H+ +V G S+ + G +
Sbjct: 247 SKDVRVTDCKIKTGDDCMSIENG-----------THNLHVSKVTCGPGHGISIGSLGDDN 295
Query: 61 SGG-ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
S +S + ++ + L+ + NG +T +G GY K I + +Y++ N
Sbjct: 296 SRAEVSGITIDSVQLHGTTNGARIKTYQGGSGYAKDITFQNMVMYDVKNPIIIDQNYCDR 355
Query: 120 PDDDFDPDALPAIDQITFKDIIGTNITI-AGNFTGIQEAPFANICLSNISLLINPGSYNS 178
+ ++ + + FK+I GT T A + P I L NI L + G ++
Sbjct: 356 AKPCGEQESAVQVSGVVFKNIRGTTSTKDAIKMNCSENVPCQGITLQNIDLEMQDGKGST 415
Query: 179 WE-CSNIHGSS-ESVFPEPC 196
C N +V P+PC
Sbjct: 416 RSTCRNAKWREFGTVHPQPC 435
>gi|388259231|ref|ZP_10136405.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
gi|387937189|gb|EIK43746.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
Length = 461
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 26/182 (14%)
Query: 5 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGI 64
+ +E+ G D+I++KSG D G GRP+ ++ +R L G V GSEMSGGI
Sbjct: 270 ILVENNHFRTGDDSIAIKSGRDLDGRTIGRPSENIVVRNNLFDGEDG--VGLGSEMSGGI 327
Query: 65 SNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAE------LYNINVAFGACGNCGS 118
NV + + RGG ++ + I + + L+ ++++ A G+
Sbjct: 328 KNVYFTDNDYLKGTSAFRLKANLDRGGSVEHVRIRNMKIGSAKYLFWFDLSYVAGYLGGN 387
Query: 119 HP----DDDFDPDALPAIDQI---------TFKDIIGTNITIAGN-----FTGIQEAPFA 160
P D F+ + +D +D++ NI + + FTG++ F+
Sbjct: 388 FPSRYQDIVFENITVDKVDTFFISHAPEVQPLQDVLFKNIKVKSSGEFMEFTGLKNVTFS 447
Query: 161 NI 162
++
Sbjct: 448 DV 449
>gi|375259243|ref|YP_005018413.1| glycoside hydrolase [Klebsiella oxytoca KCTC 1686]
gi|365908721|gb|AEX04174.1| glycoside hydrolase family protein [Klebsiella oxytoca KCTC 1686]
Length = 460
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 29/155 (18%)
Query: 49 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV 108
G ++ GSE +GG++NV VE S+ GI ++ +G+GG +K IV + ++N+ V
Sbjct: 273 KQGRGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNVEV 332
Query: 109 --AFGACGNCG--------------------------SHPDDDFDPDALPAIDQITFKDI 140
F A S P FD P IT +++
Sbjct: 333 PLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDKYKTPHFSNITVENL 392
Query: 141 IGTNITIAGNF-TGIQEAPFANICLSNISLLINPG 174
T + A + G EAP + SN+++ + G
Sbjct: 393 TSTGDSKAAAYIIGTPEAPLSGFHFSNVNIEADRG 427
>gi|325300073|ref|YP_004259990.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319626|gb|ADY37517.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 458
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 6/172 (3%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N +E C G DA+ +KSG ++ P ++ +R ++ + GSEMS
Sbjct: 261 SRNFLVEHCTFDQGDDAVVIKSGRNQDAWRLNTPCENIVVRHCAIRKGH-VLLGIGSEMS 319
Query: 62 GGISNVQVEKIHLYDSLNGIEF-RTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
GG+ N+ + + +S+ + F +T RGG+I+ I + + E ++ AF + +
Sbjct: 320 GGVRNIYMHDCTVPESVQRLFFLKTNHRRGGFIENIYLENIEAGDMLRAFEIDTDV-LYQ 378
Query: 121 DDDFDP---DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
D P L I I K++ + G +E P ++ + N+ +
Sbjct: 379 WKDLVPTYERKLTRIKGIYMKNVHCKSADAIYELKGEKEEPIRDVFIENVKV 430
>gi|397656221|ref|YP_006496923.1| Polygalacturonase [Klebsiella oxytoca E718]
gi|394344836|gb|AFN30957.1| Polygalacturonase [Klebsiella oxytoca E718]
Length = 460
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 29/155 (18%)
Query: 49 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV 108
G ++ GSE +GG++NV VE S+ GI ++ +G+GG +K IV + ++N+ V
Sbjct: 273 KQGRGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNVEV 332
Query: 109 --AFGACGNCG--------------------------SHPDDDFDPDALPAIDQITFKDI 140
F A S P FD P IT +++
Sbjct: 333 PLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDKYKTPHFSNITVENL 392
Query: 141 IGTNITIAGNF-TGIQEAPFANICLSNISLLINPG 174
T + A + G EAP + SN+++ + G
Sbjct: 393 TSTGDSKAAAYIIGTPEAPLSGFHFSNVNIEADRG 427
>gi|225420387|ref|ZP_03762690.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
gi|225040964|gb|EEG51210.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
Length = 519
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 18/176 (10%)
Query: 13 AMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKI 72
++G D I++KSG G Y P+ + IR+ + GS V GSE+ G+ ++ V
Sbjct: 291 SVGDDCIAVKSGKIYMGKTYRTPSEHITIRQCSMNDGHGS-VVIGSEIGAGVRDLTVRDC 349
Query: 73 HLYDSLNGIEFRTTKGRGG--YIKQIVISDAELYNINVAFGACGNCGSHPDDD------- 123
D+ G+ +T +GRG + ++ + + + F NC D D
Sbjct: 350 IFKDTDRGLRIKTRRGRGEDCVVDRVAFENIRMDGVLTPFVV--NCFYFCDPDGRTEYVQ 407
Query: 124 -FDP----DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISLLINP 173
+P + P+I +++FKDI N A G+ E ++ NIS+ P
Sbjct: 408 SKEPLPVDERTPSIQELSFKDIHAENAHYAAVCAYGLPEQKIGHLIFENISVSYAP 463
>gi|402308351|ref|ZP_10827360.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400375795|gb|EJP28690.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 470
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S V I + +I G D I +K+G G+ YG P +V I + ++ G V GSE
Sbjct: 269 SCRQVLIVNNVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTVYNAHGGFV-IGSEF 326
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI 106
SGG+ N+ V + + G+ F++ RGG + I ISD + +I
Sbjct: 327 SGGMKNIVVRRNKFCGTDTGLRFKSAVKRGGKTENIFISDIYMTDI 372
>gi|302875124|ref|YP_003843757.1| glycoside hydrolase family protein [Clostridium cellulovorans 743B]
gi|307690250|ref|ZP_07632696.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
gi|302577981|gb|ADL51993.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
Length = 510
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 33/187 (17%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S ++ IE+C G D I++KSG + G G PT +V IR + G + GSE+
Sbjct: 297 SCKDMIIENCYFLTGDDCIAIKSGRNNEGRNIGVPTENVIIRYNEFKDGHG-GITIGSEI 355
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVA------FG 111
SGG++++ + +DS I F+T RGG ++ I + ++ + +A F
Sbjct: 356 SGGVNDIFAHD-NYFDSKELDYPIRFKTNAERGGKLENIYVKNSTVNKSKIAVIHADFFY 414
Query: 112 ACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGN---------FTGIQEAPFANI 162
G G H P + IT ++I T+ G G + AP NI
Sbjct: 415 EEGTNGDHK---------PILRNITLENI----KTVEGGSIDAKNALYIKGFEHAPIENI 461
Query: 163 CLSNISL 169
+ + L
Sbjct: 462 VIEDAIL 468
>gi|421472155|ref|ZP_15920382.1| polygalacturonase domain protein, partial [Burkholderia multivorans
ATCC BAA-247]
gi|400223840|gb|EJO54116.1| polygalacturonase domain protein, partial [Burkholderia multivorans
ATCC BAA-247]
Length = 615
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 70/192 (36%), Gaps = 52/192 (27%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWD---EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+V EDC G D I++KSG + EYG A H+ R +S + GSEM
Sbjct: 344 DVLCEDCTFNTGDDCIAIKSGKNRDTEYGPA------KRHLVRNCTMNSGHGGITLGSEM 397
Query: 61 SGGISNVQVEKIHLYDS------LN-GIEFRTTKGRGGYIKQIVISDAELYN-------- 105
GG+ + + + ++ LN I +T RGGY+K + L N
Sbjct: 398 GGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPNGVTLKGGG 457
Query: 106 ----------------INVAFGACGN------------CGSHPDDDFDPDALPAIDQITF 137
+ V A GN C P +D P + +T
Sbjct: 458 YGSALLAGSPINASVPLGVVTPAAGNPSAAQGGIVTFDCDYQPANDAVRTRAPVVQNVTI 517
Query: 138 KDIIGTNITIAG 149
D+ N+T+ G
Sbjct: 518 ADVTARNVTLNG 529
>gi|421863816|ref|ZP_16295509.1| Polygalacturonase [Burkholderia cenocepacia H111]
gi|358076142|emb|CCE46387.1| Polygalacturonase [Burkholderia cenocepacia H111]
Length = 665
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 71/192 (36%), Gaps = 52/192 (27%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWD---EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+V EDC G D I++KSG D EYG A H+ R +S + GSEM
Sbjct: 394 DVLCEDCTFNTGDDCIAIKSGKDRDTEYGPA------KRHLIRNCTMNSGHGGITLGSEM 447
Query: 61 SGGISNVQVEKIHLYDS------LN-GIEFRTTKGRGGYIKQIVISDAELYN-------- 105
GG+ + + + ++ LN I +T RGGY+K + L N
Sbjct: 448 GGGVEQIYASNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPNGLTLKGGG 507
Query: 106 ----------------INVAFGACGN------------CGSHPDDDFDPDALPAIDQITF 137
+ V + GN C P +D P + +T
Sbjct: 508 YGSALLAGSPINASVPLGVVTPSAGNPSAAQGGIVTFDCDYQPANDAVRTRAPVVQNVTI 567
Query: 138 KDIIGTNITIAG 149
D+ +N+T+ G
Sbjct: 568 SDVKASNVTLNG 579
>gi|288924892|ref|ZP_06418828.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288338082|gb|EFC76432.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 470
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S V I + +I G D I +K+G G+ YG P +V I + ++ G V GSE
Sbjct: 269 SCRQVLIVNNVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTVYNAHGGFV-IGSEF 326
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI 106
SGG+ N+ V + + G+ F++ RGG + I ISD + +I
Sbjct: 327 SGGMKNIVVRRNKFCGTDTGLRFKSAVKRGGKTENIFISDIYMTDI 372
>gi|380693875|ref|ZP_09858734.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 506
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ IE+C + D I +KSG D G+ RPT +V +R + +G + GSE
Sbjct: 257 SSCNILIENCDVDCNDDNICIKSGRDADGLRVNRPTENVVVRNCTARKGAG-LITCGSET 315
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA 112
SG I N+ + + + ++ RGG I+ I ++ NI+ A
Sbjct: 316 SGSIRNILGYDLKAVGTSTVLRLKSAMNRGGTIENIYMTRVSAENISQVLAA 367
>gi|421478826|ref|ZP_15926555.1| polygalacturonase domain protein [Burkholderia multivorans CF2]
gi|400223986|gb|EJO54252.1| polygalacturonase domain protein [Burkholderia multivorans CF2]
Length = 665
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 70/192 (36%), Gaps = 52/192 (27%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWD---EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+V EDC G D I++KSG + EYG A H+ R +S + GSEM
Sbjct: 394 DVLCEDCTFNTGDDCIAIKSGKNRDTEYGPA------KRHLVRNCTMNSGHGGITLGSEM 447
Query: 61 SGGISNVQVEKIHLYDS------LN-GIEFRTTKGRGGYIKQIVISDAELYN-------- 105
GG+ + + + ++ LN I +T RGGY+K + L N
Sbjct: 448 GGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPNGVTLKGGG 507
Query: 106 ----------------INVAFGACGN------------CGSHPDDDFDPDALPAIDQITF 137
+ V A GN C P +D P + +T
Sbjct: 508 YGSALLAGSPINASVPLGVVTPAAGNPSAAQGGIVTFDCDYQPANDAVRTRAPVVQNVTI 567
Query: 138 KDIIGTNITIAG 149
D+ N+T+ G
Sbjct: 568 ADVTARNVTLNG 579
>gi|161519770|ref|YP_001583197.1| glycoside hydrolase family protein [Burkholderia multivorans ATCC
17616]
gi|189354051|ref|YP_001949678.1| endopolygalacturonase [Burkholderia multivorans ATCC 17616]
gi|160343820|gb|ABX16905.1| glycoside hydrolase family 28 [Burkholderia multivorans ATCC 17616]
gi|189338073|dbj|BAG47142.1| endopolygalacturonase [Burkholderia multivorans ATCC 17616]
Length = 665
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 70/192 (36%), Gaps = 52/192 (27%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWD---EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+V EDC G D I++KSG + EYG A H+ R +S + GSEM
Sbjct: 394 DVLCEDCTFNTGDDCIAIKSGKNRDTEYGPA------KRHLVRNCTMNSGHGGITLGSEM 447
Query: 61 SGGISNVQVEKIHLYDS------LN-GIEFRTTKGRGGYIKQIVISDAELYN-------- 105
GG+ + + + ++ LN I +T RGGY+K + L N
Sbjct: 448 GGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPNGVTLKGGG 507
Query: 106 ----------------INVAFGACGN------------CGSHPDDDFDPDALPAIDQITF 137
+ V A GN C P +D P + +T
Sbjct: 508 YGSALLAGSPINASVPLGVVTPAAGNPSAAQGGIVTFDCDYQPANDAVRTRAPVVQNVTI 567
Query: 138 KDIIGTNITIAG 149
D+ N+T+ G
Sbjct: 568 ADVTARNVTLNG 579
>gi|325105247|ref|YP_004274901.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974095|gb|ADY53079.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 456
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S NV IED D I++K+G D G G + ++ IR + G V GSEMS
Sbjct: 261 SKNVLIEDIDFNNADDNIAIKAGRDYEGRRIGLTSENIIIRNCRFKGLHG--VVIGSEMS 318
Query: 62 GGISNVQVEKIHLYDSL--NGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNC 116
G+ NV VE Y GI ++ RGG+I+ I I+ NV FG +C
Sbjct: 319 AGVQNVFVENC-TYGGYCKRGIYLKSNPDRGGFIRDIYIN-------NVVFGEVEDC 367
>gi|206564620|ref|YP_002235383.1| putative polygalacturonate hydrolase [Burkholderia cenocepacia
J2315]
gi|444359790|ref|ZP_21161085.1| polygalacturonase domain protein [Burkholderia cenocepacia BC7]
gi|444367969|ref|ZP_21167846.1| polygalacturonase domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|198040660|emb|CAR56646.1| putative polygalacturonate hydrolase [Burkholderia cenocepacia
J2315]
gi|443601359|gb|ELT69502.1| polygalacturonase domain protein [Burkholderia cenocepacia BC7]
gi|443601809|gb|ELT69929.1| polygalacturonase domain protein [Burkholderia cenocepacia
K56-2Valvano]
Length = 665
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 71/192 (36%), Gaps = 52/192 (27%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWD---EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+V EDC G D I++KSG D EYG A H+ R +S + GSEM
Sbjct: 394 DVLCEDCTFNTGDDCIAIKSGKDRDTEYGPA------KRHLIRNCTMNSGHGGITLGSEM 447
Query: 61 SGGISNVQVEKIHLYDS------LN-GIEFRTTKGRGGYIKQIVISDAELYN-------- 105
GG+ + + + ++ LN I +T RGGY+K + L N
Sbjct: 448 GGGVEQIYASNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPNGLTLKGGG 507
Query: 106 ----------------INVAFGACGN------------CGSHPDDDFDPDALPAIDQITF 137
+ V + GN C P +D P + +T
Sbjct: 508 YGSALLAGSPINASVPLGVVTPSAGNPSAAQGGIVTFDCDYQPANDAVRTRAPVVQNVTI 567
Query: 138 KDIIGTNITIAG 149
D+ +N+T+ G
Sbjct: 568 SDVKASNVTLNG 579
>gi|221200600|ref|ZP_03573641.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2M]
gi|221208427|ref|ZP_03581429.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2]
gi|221171615|gb|EEE04060.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2]
gi|221179172|gb|EEE11578.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2M]
Length = 665
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 70/192 (36%), Gaps = 52/192 (27%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWD---EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+V EDC G D I++KSG + EYG A H+ R +S + GSEM
Sbjct: 394 DVLCEDCTFNTGDDCIAIKSGKNRDTEYGPA------KRHLVRNCTMNSGHGGITLGSEM 447
Query: 61 SGGISNVQVEKIHLYDS------LN-GIEFRTTKGRGGYIKQIVISDAELYN-------- 105
GG+ + + + ++ LN I +T RGGY+K + L N
Sbjct: 448 GGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPNGVTLKGGG 507
Query: 106 ----------------INVAFGACGN------------CGSHPDDDFDPDALPAIDQITF 137
+ V A GN C P +D P + +T
Sbjct: 508 YGSALLAGSPINASVPLGVVTPAAGNPSAAQGGIVTFDCDYQPANDAVRTRAPVVQNVTI 567
Query: 138 KDIIGTNITIAG 149
D+ N+T+ G
Sbjct: 568 ADVTARNVTLNG 579
>gi|423112756|ref|ZP_17100447.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
gi|376390250|gb|EHT02936.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
Length = 460
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 29/155 (18%)
Query: 49 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV 108
G ++ GSE +GG++NV VE S+ GI ++ +G+GG +K IV + ++N+ V
Sbjct: 273 KQGRGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNVEV 332
Query: 109 --AFGACGNCG--------------------------SHPDDDFDPDALPAIDQITFKDI 140
F A S P FD P IT +++
Sbjct: 333 PLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDKYKTPHFSNITVENL 392
Query: 141 IGTNITIAGNF-TGIQEAPFANICLSNISLLINPG 174
T + A + G EAP + SN+++ + G
Sbjct: 393 TSTGDSKAAAYIIGTPEAPLSGFHFSNVNIEADRG 427
>gi|261822466|ref|YP_003260572.1| glycoside hydrolase family protein [Pectobacterium wasabiae WPP163]
gi|261606479|gb|ACX88965.1| glycoside hydrolase family 28 [Pectobacterium wasabiae WPP163]
gi|385872775|gb|AFI91295.1| Glycoside hydrolase family 28 [Pectobacterium sp. SCC3193]
Length = 460
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 32/202 (15%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N+ I + I D I++K+ + G +++I +L+ G S+ GSE S
Sbjct: 229 SQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGV-VDNIYIANNILKQGRGISI--GSETS 285
Query: 62 GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV--AFGACGNCG-- 117
GG++NV VE S+ GI +T +G+GG +K I + ++ ++ + F A
Sbjct: 286 GGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPI 345
Query: 118 ------------------------SHPDDDFDPDALPAIDQITFKDIIGTNITIAGNF-T 152
+ P+ FD P +T +++ T T A +
Sbjct: 346 VQAEVDKMLAEGGFTMGEQIYPPDTDPEQPFDQYKTPHFSNVTIENLESTGKTKAAAYII 405
Query: 153 GIQEAPFANICLSNISLLINPG 174
G+ EAP + N+ + + G
Sbjct: 406 GVPEAPLSGFHFDNVRIDADKG 427
>gi|15893646|ref|NP_346995.1| polygalacturonase [Clostridium acetobutylicum ATCC 824]
gi|337735568|ref|YP_004635015.1| polygalacturonase [Clostridium acetobutylicum DSM 1731]
gi|384457079|ref|YP_005669499.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|15023202|gb|AAK78335.1|AE007550_2 Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
ATCC 824]
gi|325507768|gb|ADZ19404.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|336292627|gb|AEI33761.1| putative polygalacturonase (pectinase) [Clostridium acetobutylicum
DSM 1731]
Length = 513
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 22/186 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTT--DVHIRRVLLQSSSGSSVAFGS 58
S NV I ++G D I++KSG + I+ P + +++IR ++S G+ V GS
Sbjct: 279 SCKNVLILGDTFSVGDDCIAIKSG--KIDISKKNPVSSENINIRNCNMRSGHGA-VVLGS 335
Query: 59 EMSGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGACGNC 116
EMS G+ ++ +EK + G+ +T +GRG G I I + + ++ + F N
Sbjct: 336 EMSSGLKSIFIEKCIFNATDRGLRIKTRRGRGSKGIIDNIHMKNIKMDKVLTPFSI--NS 393
Query: 117 GSHPDDD------FDPDALPAIDQ------ITFKDIIGTNITIAGNFT-GIQEAPFANIC 163
DDD + + LP D+ I +D+ TN + F G+ E +
Sbjct: 394 FYFCDDDGKTEYVWSKEKLPVDDKTPYIGSIYVEDVTCTNAHVCAAFMYGLPEQKIEKVS 453
Query: 164 LSNISL 169
+ N+S+
Sbjct: 454 MKNVSV 459
>gi|227329691|ref|ZP_03833715.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 460
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 32/202 (15%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N+ I + I D I++K+ + G +++I +L+ G S+ GSE S
Sbjct: 229 SQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGV-VDNIYIANNILKQGRGISI--GSETS 285
Query: 62 GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV--AFGACGNCG-- 117
GG++NV VE S+ GI +T +G+GG +K I + ++ ++ + F A
Sbjct: 286 GGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPI 345
Query: 118 ------------------------SHPDDDFDPDALPAIDQITFKDIIGTNITIAGNF-T 152
+ P+ FD P +T +++ T T A +
Sbjct: 346 VQAEVDKMLAEGGFTMGEQIYPPDTDPEQPFDQYKTPHFSNVTIENLESTGKTKAAAYII 405
Query: 153 GIQEAPFANICLSNISLLINPG 174
G+ EAP + N+ + + G
Sbjct: 406 GVPEAPLSGFHFDNVRIDADKG 427
>gi|170736971|ref|YP_001778231.1| glycoside hydrolase family protein [Burkholderia cenocepacia MC0-3]
gi|169819159|gb|ACA93741.1| glycoside hydrolase family 28 [Burkholderia cenocepacia MC0-3]
Length = 665
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 71/192 (36%), Gaps = 52/192 (27%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWD---EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+V EDC G D I++KSG D EYG A H+ R +S + GSEM
Sbjct: 394 DVLCEDCTFNTGDDCIAIKSGKDRDTEYGPA------KRHLIRNCTMNSGHGGITLGSEM 447
Query: 61 SGGISNVQVEKIHLYDS------LN-GIEFRTTKGRGGYIKQIVISDAELYN-------- 105
GG+ + + + ++ LN + +T RGGY+K + L N
Sbjct: 448 GGGVEQIYATNLSMLNANWQTNPLNIAVRVKTNMNRGGYVKDFHVKGVTLPNGVTLKGGG 507
Query: 106 ----------------INVAFGACGN------------CGSHPDDDFDPDALPAIDQITF 137
+ V + GN C P +D P + +T
Sbjct: 508 YGSALLAGSPVNASVPLGVVTPSAGNPSAAQGGIVTFDCDYQPANDAVRTRAPVVQNVTI 567
Query: 138 KDIIGTNITIAG 149
D+ +N+T+ G
Sbjct: 568 ADVKASNVTLNG 579
>gi|254254779|ref|ZP_04948096.1| Endopolygalacturonase [Burkholderia dolosa AUO158]
gi|124899424|gb|EAY71267.1| Endopolygalacturonase [Burkholderia dolosa AUO158]
Length = 668
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 72/192 (37%), Gaps = 52/192 (27%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWD---EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+V E+C G D I++KSG + EYG A H+ R +S + GSEM
Sbjct: 397 DVLCEECTFNTGDDCIAIKSGKNLDTEYGPA------KRHLIRNCTMNSGHGGITLGSEM 450
Query: 61 SGGISNVQVEKIHLYDS------LN-GIEFRTTKGRGGYIKQIVISDAELYN-INVAFGA 112
GG+ + + + ++ LN I +T RGGY+K + L N +N+ G
Sbjct: 451 GGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPNGVNLKGGG 510
Query: 113 CGN-----------------------------------CGSHPDDDFDPDALPAIDQITF 137
GN C P +D P + +T
Sbjct: 511 YGNALLAGSPINATVPLGVVTSAAGNPSAAQGGIVTFDCDYQPANDAVRTRPPVVQNVTI 570
Query: 138 KDIIGTNITIAG 149
D+ +N+T+ G
Sbjct: 571 SDVKASNVTLGG 582
>gi|50120129|ref|YP_049296.1| polygalacturonase [Pectobacterium atrosepticum SCRI1043]
gi|49610655|emb|CAG74100.1| putative polygalacturonase [Pectobacterium atrosepticum SCRI1043]
Length = 460
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 29/155 (18%)
Query: 49 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV 108
G ++ GSE SGG++NV VE S+ GI +T +G+GG +K I + ++ ++ +
Sbjct: 273 KQGRGISIGSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEI 332
Query: 109 --AFGACGNCG--------------------------SHPDDDFDPDALPAIDQITFKDI 140
F A + P+ FD P +T +++
Sbjct: 333 PLVFAAYYKAAPIVQAEVDKMLAEGGFTMGEQIYPPDTDPEQPFDQYKTPHFSNVTIENL 392
Query: 141 IGTNITIAGNF-TGIQEAPFANICLSNISLLINPG 174
T T A + G+ EAP + N+ + + G
Sbjct: 393 ESTGKTKAAAYIIGVPEAPLSGFHFDNVRIDADKG 427
>gi|315607918|ref|ZP_07882911.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
gi|315250387|gb|EFU30383.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
Length = 470
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S V I + +I G D I +K+G G+ YG P +V I + ++ G V GSE
Sbjct: 269 SCRQVLIINNVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTVYNAHGGFV-IGSEF 326
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI 106
SGG+ N+ V + + G+ F++ RGG + I ISD + +I
Sbjct: 327 SGGMKNIVVRRNKFCGTDTGLRFKSAVKRGGKTENIFISDIYMTDI 372
>gi|254249598|ref|ZP_04942918.1| Endopolygalacturonase [Burkholderia cenocepacia PC184]
gi|124876099|gb|EAY66089.1| Endopolygalacturonase [Burkholderia cenocepacia PC184]
Length = 667
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 71/192 (36%), Gaps = 52/192 (27%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWD---EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+V EDC G D I++KSG D EYG A H+ R +S + GSEM
Sbjct: 396 DVLCEDCTFNTGDDCIAIKSGKDRDVEYGPA------KRHLIRNCTMNSGHGGITLGSEM 449
Query: 61 SGGISNVQVEKIHLYDS------LN-GIEFRTTKGRGGYIKQIVISDAELYN-------- 105
GG+ + + + ++ LN I +T RGGY+K + L N
Sbjct: 450 GGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPNGVTLKGGG 509
Query: 106 ----------------INVAFGACGN------------CGSHPDDDFDPDALPAIDQITF 137
+ V + GN C P +D P + +T
Sbjct: 510 YGSALLAGSPVNASVPLGVVTPSAGNPSAAQGGIVTFDCDYQPANDAVRTRAPVVQNMTI 569
Query: 138 KDIIGTNITIAG 149
D+ +N+T+ G
Sbjct: 570 ADVKASNVTLNG 581
>gi|146311767|ref|YP_001176841.1| glycoside hydrolase family protein [Enterobacter sp. 638]
gi|145318643|gb|ABP60790.1| glycoside hydrolase, family 28 [Enterobacter sp. 638]
Length = 460
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 29/150 (19%)
Query: 49 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV 108
G ++ GSE +GG++NV VE S+ GI ++ +G+GG +K IV + +++N+ V
Sbjct: 273 KQGRGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTKMHNVEV 332
Query: 109 --AFGACGNCG--------------------------SHPDDDFDPDALPAIDQITFKDI 140
F A S P FD P IT +++
Sbjct: 333 PLVFSAYYKAAPIVEAEVEKLLKEGGFTLGEQIYPPDSDPKQPFDKYKTPHFSNITVENL 392
Query: 141 IGTNITIAGNF-TGIQEAPFANICLSNISL 169
T + A + G EAP + +N+++
Sbjct: 393 TSTGDSKAAAYIIGTPEAPLSGFHFTNVNI 422
>gi|325298611|ref|YP_004258528.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324318164|gb|ADY36055.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 484
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS ++ IE+ I D I LK+G D G+ RPT V IR + + G V GSE
Sbjct: 250 SSSDILIENAYIDCNDDNICLKAGRDADGLRVNRPTERVVIRNC-IAAKGGGLVTIGSET 308
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVIS 99
SGGI NV + + + ++ RGG ++ I ++
Sbjct: 309 SGGIRNVLAYDLESKGTSTMLRLKSAMNRGGTVEHIYVT 347
>gi|255642114|gb|ACU21323.1| unknown [Glycine max]
Length = 203
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIR 42
NV IEDC I G D +++KSGWDEYGI +G PT + I
Sbjct: 161 NVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIE 199
>gi|251790610|ref|YP_003005331.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247539231|gb|ACT07852.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 467
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 32/202 (15%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N+ I + +I D I++K+ + G +V+I +L+ G S+ GSE S
Sbjct: 236 SQNIRITNNVIDCNDDHIAIKAEKPDSRFPDG-VVDNVYIANNVLKQGRGISI--GSETS 292
Query: 62 GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP- 120
GG++NV VE S+ GI ++ +G+GG +K + + N+ V G + P
Sbjct: 293 GGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMVNVEVPLVFSGYYQAAPI 352
Query: 121 -----------------DDDFDPDALPAIDQITFKDIIGTNITI-----------AGNFT 152
+ + PD PA K +NITI AG
Sbjct: 353 VQAEVDKLLQAGGFTLGEQIYPPDTEPAQPFDKVKTPHFSNITIVDLESTGRSKAAGYII 412
Query: 153 GIQEAPFANICLSNISLLINPG 174
G+ EAP + + + G
Sbjct: 413 GVPEAPLSGFHFEQVRIEAEKG 434
>gi|373462557|ref|ZP_09554274.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
gi|371948030|gb|EHO65924.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
Length = 853
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 3 DNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSG 62
+NV I++ + G D I++KSG + G + +P+ ++ IR +++ G V GSE+SG
Sbjct: 268 ENVLIQNTLFHTGDDCIAIKSGRNNDGRFWNQPSKNIIIRNCVMEDGHG-GVVIGSEISG 326
Query: 63 GISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
G N+ E + DS + +T RGG I+ I + V G C
Sbjct: 327 GCQNIYAEDCEM-DSPELDRVLRIKTNNCRGGLIENINMR-------RVKVGQCKEAVVK 378
Query: 120 PDDDFDP 126
+ D++P
Sbjct: 379 INLDYEP 385
>gi|218134189|ref|ZP_03462993.1| hypothetical protein BACPEC_02079 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991564|gb|EEC57570.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 480
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 5/155 (3%)
Query: 5 VCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGI 64
V I + +G D I LKSG +E G PT V+I + + G V GSEMS G+
Sbjct: 265 VEIYNTKFEVGDDGICLKSGKNEIGRRIKTPTKYVYIHDCTVMHAHGGFVV-GSEMSRGM 323
Query: 65 SNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI---NVAFGACGNCGSHPD 121
S V V+ + GI F++ GRGG ++ I + + + I + F +
Sbjct: 324 SEVYVQNCAFMGTDVGIRFKSQLGRGGIVENINLENINMTGIVGEAIIFTMGYSLYKLEH 383
Query: 122 DDFDPDALPAIDQI-TFKDIIGTNITIAGNFTGIQ 155
+ D D + + I F+++ NIT G T +
Sbjct: 384 EKKDEDVFVSTEDIPVFRNVNMKNITCVGAKTAFK 418
>gi|294674151|ref|YP_003574767.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
gi|294473505|gb|ADE82894.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
Length = 1596
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 3 DNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSG 62
D V IEDC G D I++KSG + G P+ ++ IR +++ G V GSE+SG
Sbjct: 277 DRVLIEDCFFNTGDDCIAIKSGRNRDGRERNMPSKNIIIRNCEMKNGHG-GVVVGSEISG 335
Query: 63 GISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
G NV + DS + +T RGG I+ I + N+ G C
Sbjct: 336 GCQNVYAHDC-VMDSPELERVLRIKTNSCRGGIIENINMR-------NITVGKC 381
>gi|227114428|ref|ZP_03828084.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 460
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 32/202 (15%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N+ I + I D I++K+ + G +++I +L+ G S+ GSE S
Sbjct: 229 SQNIRITNNYIDCNDDHIAIKAEKPDSRFPNG-VVDNIYIANNILKQGRGISI--GSETS 285
Query: 62 GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV--AFGA------- 112
GG++NV VE S+ GI +T +G+GG +K I + ++ ++ + F A
Sbjct: 286 GGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPI 345
Query: 113 ---------------CGNCGSHPDDD----FDPDALPAIDQITFKDIIGTNITIAGNF-T 152
G PD D FD P +T +++ T T A +
Sbjct: 346 VQAEVDKMLAEGGFTMGEQIYPPDTDPEQLFDQYKTPHFSNVTIENLESTGKTKAAAYII 405
Query: 153 GIQEAPFANICLSNISLLINPG 174
G+ EAP + N+ + + G
Sbjct: 406 GVPEAPLSGFHFDNVRIDADKG 427
>gi|357129594|ref|XP_003566446.1| PREDICTED: polygalacturonase-like [Brachypodium distachyon]
Length = 424
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 18/200 (9%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEM 60
S V + +C+I G D +S++ G T ++H++ ++ G S+ + G +
Sbjct: 231 SKGVKVRNCMIRTGDDCLSIEDG-----------TKNLHVKNIVCGPGHGISIGSLGDQN 279
Query: 61 S-GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-NVAFGACGNCGS 118
S ++N+ ++ + L+ + NG +T +G GY K IV + + N+ N C S
Sbjct: 280 SEAQVANITIDGVRLHGTTNGARIKTWQGGRGYAKNIVFQNMIMDNVWNPIIIDQNYCDS 339
Query: 119 HPDDDFDPDALPAIDQITFKDIIGTNITI-AGNFTGIQEAPFANICLSNISLLINPGSYN 177
A+ + + FK+I GT+ + A + + AP I L N+ L + G N
Sbjct: 340 ATPCKKQKSAV-EVSNVLFKNIRGTSASREAIKLSCSRAAPCHGIALHNVKLTLKRGGGN 398
Query: 178 SWE-CSNIHGSS-ESVFPEP 195
+ C N +V P+P
Sbjct: 399 AKSTCQNAKWKKLGTVMPQP 418
>gi|253687486|ref|YP_003016676.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251754064|gb|ACT12140.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 460
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 32/202 (15%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N+ I + I D I++K+ + G +++I +L+ G S+ GSE S
Sbjct: 229 SQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGV-VDNIYIANNILKQGRGISI--GSETS 285
Query: 62 GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV--AFGA------- 112
GG++NV VE S+ GI +T +G+GG +K I + ++ ++ + F A
Sbjct: 286 GGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPI 345
Query: 113 ---------------CGNCGSHPDDD----FDPDALPAIDQITFKDIIGTNITIAGNF-T 152
G PD D FD P +T +++ T T A +
Sbjct: 346 VQAEVDKMLAEGGFTMGEQIYPPDTDPAQPFDQYKTPHFSNVTIENLESTGKTKAAAYII 405
Query: 153 GIQEAPFANICLSNISLLINPG 174
G+ EAP + N+ + + G
Sbjct: 406 GVPEAPLSGFHFDNVRIDADKG 427
>gi|423301865|ref|ZP_17279888.1| hypothetical protein HMPREF1057_03029 [Bacteroides finegoldii
CL09T03C10]
gi|408470956|gb|EKJ89488.1| hypothetical protein HMPREF1057_03029 [Bacteroides finegoldii
CL09T03C10]
Length = 505
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V +E+C I D I +KSG D G+ RPT + IR + + +G + GSE
Sbjct: 257 SSTHVLVENCDIDCNDDNICIKSGRDADGLRVNRPTEKIVIRNCIARKGAG-LITCGSET 315
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA 112
SG I N+ + + + ++ RGG ++ I ++ N+ A
Sbjct: 316 SGSIRNILGYNLDAEGTSTVLRLKSAMNRGGTVENIYMTRINAKNVQQVLAA 367
>gi|403057563|ref|YP_006645780.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402804889|gb|AFR02527.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 460
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 29/155 (18%)
Query: 49 SSGSSVAFGSEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV 108
G ++ GSE SGG++NV VE S+ GI +T +G+GG +K I + ++ ++ +
Sbjct: 273 KQGRGISIGSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEI 332
Query: 109 --AFGA----------------------CGNCGSHPDDD----FDPDALPAIDQITFKDI 140
F A G PD D FD P +T +++
Sbjct: 333 PLVFAAYYKAAPIVQAEVDKMLAEGGFTMGEQIYPPDTDPAQPFDQYKTPHFSNVTIENL 392
Query: 141 IGTNITIAGNF-TGIQEAPFANICLSNISLLINPG 174
T T A + G+ EAP + N+ + + G
Sbjct: 393 ESTGKTKAAAYIIGVPEAPLSGFHFDNVRIDADKG 427
>gi|255691107|ref|ZP_05414782.1| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623460|gb|EEX46331.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 505
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V +E+C I D I +KSG D G+ RPT + IR + + +G + GSE
Sbjct: 257 SSTHVLVENCDIDCNDDNICIKSGRDADGLRVNRPTEKIVIRNCIARKGAG-LITCGSET 315
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA 112
SG I N+ + + + ++ RGG ++ I ++ N+ A
Sbjct: 316 SGSIRNILGYNLDAEGTSTVLRLKSAMNRGGTVENIYMTRINAKNVQQVLAA 367
>gi|160886934|ref|ZP_02067937.1| hypothetical protein BACOVA_04948 [Bacteroides ovatus ATCC 8483]
gi|423294892|ref|ZP_17273019.1| parallel beta-helix [Bacteroides ovatus CL03T12C18]
gi|156107345|gb|EDO09090.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|392676083|gb|EIY69524.1| parallel beta-helix [Bacteroides ovatus CL03T12C18]
Length = 511
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ +E+C + D I +KSG D G+ PT +V IR + + +G + GSE
Sbjct: 262 SSCNILVENCDVDCNDDNICIKSGRDADGLRVNLPTENVVIRNCIARKGAG-LITCGSET 320
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA 112
SG I NV + + + ++ RGG I+ I +++ + N+ A
Sbjct: 321 SGSIRNVLGYNLEAIGTSAVLRLKSAMNRGGTIENIYMTEVKAENVRHVLAA 372
>gi|336415463|ref|ZP_08595802.1| hypothetical protein HMPREF1017_02910 [Bacteroides ovatus
3_8_47FAA]
gi|335940342|gb|EGN02209.1| hypothetical protein HMPREF1017_02910 [Bacteroides ovatus
3_8_47FAA]
Length = 511
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ +E+C + D I +KSG D G+ PT +V IR + + +G + GSE
Sbjct: 262 SSCNILVENCDVDCNDDNICIKSGRDADGLRVNLPTENVVIRNCIARKGAG-LITCGSET 320
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA 112
SG I NV + + + ++ RGG I+ I +++ + N+ A
Sbjct: 321 SGSIRNVLGYNLEAIGTSAVLRLKSAMNRGGTIENIYMTEVKAENVRHVLAA 372
>gi|237721218|ref|ZP_04551699.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
gi|229449014|gb|EEO54805.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
Length = 495
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ +E+C + D I +KSG D G+ PT +V IR + + +G + GSE
Sbjct: 246 SSCNILVENCDVDCNDDNICIKSGRDADGLRVNLPTENVVIRNCIARKGAG-LITCGSET 304
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA 112
SG I NV + + + ++ RGG I+ I +++ + N+ A
Sbjct: 305 SGSIRNVLGYNLEAIGTSAVLRLKSAMNRGGTIENIYMTEVKAENVRHVLAA 356
>gi|383114377|ref|ZP_09935141.1| parallel beta-helix [Bacteroides sp. D2]
gi|313693916|gb|EFS30751.1| parallel beta-helix [Bacteroides sp. D2]
Length = 511
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ +E+C + D I +KSG D G+ PT +V IR + + +G + GSE
Sbjct: 262 SSCNILVENCDVDCNDDNICIKSGRDADGLRVNLPTENVVIRNCIARKGAG-LITCGSET 320
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA 112
SG I NV + + + ++ RGG I+ I +++ + N+ A
Sbjct: 321 SGSIRNVLGYNLEAIGTSAVLRLKSAMNRGGTIENIYMTEVKAENVRHVLAA 372
>gi|293370061|ref|ZP_06616627.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|299148453|ref|ZP_07041515.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|423288960|ref|ZP_17267811.1| parallel beta-helix [Bacteroides ovatus CL02T12C04]
gi|292634853|gb|EFF53376.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|298513214|gb|EFI37101.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|392668724|gb|EIY62218.1| parallel beta-helix [Bacteroides ovatus CL02T12C04]
Length = 511
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS N+ +E+C + D I +KSG D G+ PT +V IR + + +G + GSE
Sbjct: 262 SSCNILVENCDVDCNDDNICIKSGRDADGLRVNLPTENVVIRNCIARKGAG-LITCGSET 320
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGA 112
SG I NV + + + ++ RGG I+ I +++ + N+ A
Sbjct: 321 SGSIRNVLGYNLEAIGTSAVLRLKSAMNRGGTIENIYMTEVKAENVRHVLAA 372
>gi|170697849|ref|ZP_02888934.1| glycoside hydrolase family 28 [Burkholderia ambifaria IOP40-10]
gi|170137236|gb|EDT05479.1| glycoside hydrolase family 28 [Burkholderia ambifaria IOP40-10]
Length = 664
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 70/192 (36%), Gaps = 52/192 (27%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWD---EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+V E C G D I++KSG D EYG A H+ R +S + GSEM
Sbjct: 393 DVLCEGCTFNTGDDCIAIKSGKDRDTEYGPA------KRHLIRNCTMNSGHGGITLGSEM 446
Query: 61 SGGISNVQVEKIHLYDS------LN-GIEFRTTKGRGGYIKQIVISDAELYN-------- 105
GG+ + + + ++ LN I +T RGGY+K + L N
Sbjct: 447 GGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPNGVTLKGGG 506
Query: 106 ----------------INVAFGACGN------------CGSHPDDDFDPDALPAIDQITF 137
+ VA A GN C P +D P + +T
Sbjct: 507 YGSALLAGSPVNASVPLGVATPAAGNPSAAQGGIVTFDCDYQPANDAVRTRPPVVQNVTI 566
Query: 138 KDIIGTNITIAG 149
D+ N+T+ G
Sbjct: 567 SDVKAGNVTLNG 578
>gi|255536015|ref|YP_003096386.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
gi|255342211|gb|ACU08324.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
Length = 491
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 75/178 (42%), Gaps = 19/178 (10%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S NV I++ I G D I++K+G DE G G T ++ +R + G V GSEMS
Sbjct: 291 SQNVLIKNSIFNTGDDCIAIKAGRDEEGRRVGIMTENIIVRDCKMIDGHG-GVVIGSEMS 349
Query: 62 GGISNVQVEKIHLYDSL---NGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGS 118
G+ NV V H+ DS I +T RGG + + + N+ G
Sbjct: 350 AGVRNVFVYNNHM-DSPELDRAIRLKTNNVRGGVVDGVYVK-------NLTVGEVKEAVL 401
Query: 119 HPDDDFDP------DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNISL 169
H ++ + P I I +D+ N F G++ + NI N+++
Sbjct: 402 HITMNYKDYKNRTGNFTPQIRNILLEDVKVKNGGKYAIFADGLENSKIQNITFKNVTI 459
>gi|445494993|ref|ZP_21462037.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
gi|444791154|gb|ELX12701.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
Length = 624
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 10/112 (8%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV IEDC G D I++ SG I +G P ++ I+ +QS G ++ GS M
Sbjct: 373 SCTNVLIEDCHFNTGDDCIAIDSG-KGPDIQFG-PAKNIVIQNCKMQSGHG-ALTLGSIM 429
Query: 61 SGGISNVQVEKIHL------YDSLN-GIEFRTTKGRGGYIKQIVISDAELYN 105
SGGI N+ + + D LN I +T RGGY++ + + + + N
Sbjct: 430 SGGIENIYAQNLVFENSYWKTDPLNIAIRLKTNMSRGGYLRNMHVRNVHIPN 481
>gi|357130709|ref|XP_003566989.1| PREDICTED: polygalacturonase-like [Brachypodium distachyon]
Length = 424
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 18/201 (8%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEM 60
S +V + DC I G D +S++ G T ++H++ ++ G S+ + G
Sbjct: 231 SKDVKVRDCAIKTGDDCMSIEDG-----------TKNLHVKNIVCGPGHGISIGSLGDRN 279
Query: 61 SGG-ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-NVAFGACGNCGS 118
S ++N+ ++ + L+ + NG +T +G GY K IV + + N+ N C S
Sbjct: 280 SEAEVANITIDGVRLHGTTNGARIKTWQGGRGYAKNIVFQNIIMDNVWNPIIINQNYCDS 339
Query: 119 HPDDDFDPDALPAIDQITFKDIIGTNITI-AGNFTGIQEAPFANICLSNISLLINPGSYN 177
A+ + + FK+I GT+ + A P I L N+ L + GS +
Sbjct: 340 ATPCKKQQSAV-EVSNVLFKNIRGTSASREAIKLNCSPTVPCHGIALHNVRLTLKRGSGD 398
Query: 178 SWE-CSNIHGSS-ESVFPEPC 196
+ C N +V P+PC
Sbjct: 399 AKSTCHNAQWRKLGTVMPQPC 419
>gi|375100955|ref|ZP_09747218.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661687|gb|EHR61565.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 462
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 1 SSDNVCIEDC-IIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSE 59
SS +V +E+ +G D + +KSG DE G GRP+ ++ +R + + G A GSE
Sbjct: 262 SSSDVLVENNDFQGIGDDCVVVKSGRDEDGRRVGRPSENIVVRGNRMSGTEGG-FAIGSE 320
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISD 100
MSGG++ V VE+ + + + + RGG ++++ I D
Sbjct: 321 MSGGVNTVFVERNTMDTIGSALYIKANLDRGGVVERVRIRD 361
>gi|28411804|dbj|BAC57279.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group]
gi|50509106|dbj|BAD30173.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group]
gi|222636649|gb|EEE66781.1| hypothetical protein OsJ_23515 [Oryza sativa Japonica Group]
Length = 429
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 18/201 (8%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEM 60
S NV + C I G D +S++ G T ++H++ ++ G S+ + G
Sbjct: 235 SKNVQVTGCTIKTGDDCMSIEDG-----------TENLHVKNMVCGPGHGISIGSLGDHN 283
Query: 61 S-GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-NVAFGACGNCGS 118
S ++NV + + LY + NG +T +G GY K IV + + N+ N C S
Sbjct: 284 SEAHVNNVTIGTVRLYGTTNGARIKTWQGGRGYAKYIVFQNMIMENVWNPVIIDQNYCDS 343
Query: 119 HPDDDFDPDALPAIDQITFKDIIGTNITI-AGNFTGIQEAPFANICLSNISLLINPGSYN 177
A+ I + FK+I GT+ + A + P I L+++ L + G +
Sbjct: 344 ATPCKKQTSAV-QISNVVFKNIRGTSASKEAIKLDCSRNVPCQGITLNDVKLTVKGGGGD 402
Query: 178 SWE-CSNIH-GSSESVFPEPC 196
+ C N S +V P+PC
Sbjct: 403 AKSTCRNAKWKKSGTVVPQPC 423
>gi|317503775|ref|ZP_07961787.1| glycoside hydrolase [Prevotella salivae DSM 15606]
gi|315665072|gb|EFV04727.1| glycoside hydrolase [Prevotella salivae DSM 15606]
Length = 856
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+ +NV I++ G D I++KSG + G + +P+ ++ IRR +++ G + GSE+
Sbjct: 266 ACENVLIQNTHFHTGDDCIAIKSGRNNDGRLWNQPSKNIIIRRCVMEDGHG-GIVIGSEI 324
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG 117
SGG NV E + DS + + +T RGG I+ I + V G C
Sbjct: 325 SGGCMNVFAEDCTM-DSPHLDRVLRIKTNNCRGGRIENINVR-------RVKVGQCKEAV 376
Query: 118 SHPDDDFDP 126
+ D++P
Sbjct: 377 VKINLDYEP 385
>gi|359414685|ref|ZP_09207150.1| Polygalacturonase [Clostridium sp. DL-VIII]
gi|357173569|gb|EHJ01744.1| Polygalacturonase [Clostridium sp. DL-VIII]
Length = 487
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 76/182 (41%), Gaps = 18/182 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I ++G D I++KSG P+ ++IR + G+ V GSEM
Sbjct: 252 SCKNVHILGVNFSVGDDCIAIKSGKIFISKIKTMPSQHIYIRNCNMNFGHGA-VVLGSEM 310
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGACGNCGS 118
S GI+N+ VE ++ GI +T +GRG I +I + ++ + F NC
Sbjct: 311 SSGINNIYVENCLFNETDRGIRIKTRRGRGDTAIIDEIYARNIKMNKVLTPFTI--NCFY 368
Query: 119 HPDDDFDP------------DALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLS 165
D D D P I I ++I N +A F G+ E + +
Sbjct: 369 FCDIDGKTEYVWSKEKLPIDDKTPYIGNIYLQNITCLNAQVAAGFMYGLPERKIKKVKME 428
Query: 166 NI 167
NI
Sbjct: 429 NI 430
>gi|218199292|gb|EEC81719.1| hypothetical protein OsI_25337 [Oryza sativa Indica Group]
Length = 429
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 18/201 (8%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEM 60
S NV + C I G D +S++ G T ++H++ ++ G S+ + G
Sbjct: 235 SKNVQVTGCTIKTGDDCMSIEDG-----------TENLHVKNMVCGPGHGISIGSLGDHN 283
Query: 61 S-GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNI-NVAFGACGNCGS 118
S ++NV + + LY + NG +T +G GY K IV + + N+ N C S
Sbjct: 284 SEAHVNNVTIGTVRLYGTTNGARIKTWQGGRGYAKYIVFQNMIMENVWNPVIIDQNYCDS 343
Query: 119 HPDDDFDPDALPAIDQITFKDIIGTNITI-AGNFTGIQEAPFANICLSNISLLINPGSYN 177
A+ I + FK+I GT+ + A + P I L+++ L + G +
Sbjct: 344 ATPCKKQTSAV-QISNVVFKNIRGTSASKEAIKLDCSRNVPCQGITLNDVKLTVKGGGGD 402
Query: 178 SWE-CSNIH-GSSESVFPEPC 196
+ C N S +V P+PC
Sbjct: 403 AKSTCRNAKWKKSGTVVPQPC 423
>gi|431798726|ref|YP_007225630.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789491|gb|AGA79620.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 475
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
NV I+DC G D I++KSG +E G G P+ ++ I ++ G V GSE+SGG
Sbjct: 281 NVLIKDCYFDTGDDCIAIKSGRNEDGRIPGIPSENIIIEGCEMKEGHG-GVVIGSEISGG 339
Query: 64 ISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDA 101
NV + + + DS N + +T+ RGG ++ I + D
Sbjct: 340 ARNVFAQNL-VMDSPNLDRVLRIKTSSKRGGTVENIYMRDV 379
>gi|307129970|ref|YP_003881986.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
gi|306527499|gb|ADM97429.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
Length = 467
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 79/197 (40%), Gaps = 32/197 (16%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N+ I + +I D I++K+ + G +++I +L+ G S+ GSE S
Sbjct: 236 SQNIRITNNVIDCNDDHIAIKAEKPDSRFPNG-VVDNIYIANNVLKQGRGISI--GSETS 292
Query: 62 GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACG------- 114
GG++NV VE S+ GI ++ +G+GG +K + + ++ V G
Sbjct: 293 GGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMLDVEVPLVFSGYYQAAPI 352
Query: 115 ---------NCG------------SHPDDDFDPDALPAIDQITFKDIIGTNIT-IAGNFT 152
G + P FD P Q+T D+ T + AG
Sbjct: 353 VQAEVDKLLQAGGFTLGEQIYPPDTEPAQPFDKVKTPHFSQVTIVDLESTGRSKAAGYII 412
Query: 153 GIQEAPFANICLSNISL 169
G+ EAP + + +
Sbjct: 413 GVPEAPLSGFHFEQVRI 429
>gi|299141314|ref|ZP_07034451.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
gi|298577274|gb|EFI49143.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
Length = 858
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 12/130 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+ +NV I++ G D I++KSG + G + +P+ ++ IR +++ G + GSE+
Sbjct: 268 ACENVLIQNTHFHTGDDCIAIKSGRNNDGRMWNKPSRNIIIRNCVMEDGHG-GIVIGSEI 326
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG 117
SGG NV E + DS + + +T RGG I+ I + V G C
Sbjct: 327 SGGCKNVYAEDCTM-DSPHLDRVLRIKTNNCRGGRIENINMR-------RVKVGQCKEAV 378
Query: 118 SHPDDDFDPD 127
+ D++P+
Sbjct: 379 VKINLDYEPE 388
>gi|281423599|ref|ZP_06254512.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
gi|281402419|gb|EFB33250.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
Length = 856
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 12/130 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+ +NV I++ G D I++KSG + G + +P+ ++ IR +++ G + GSE+
Sbjct: 266 ACENVLIQNTHFHTGDDCIAIKSGRNNDGRMWNKPSRNIIIRNCVMEDGHG-GIVIGSEI 324
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG 117
SGG NV E + DS + + +T RGG I+ I + V G C
Sbjct: 325 SGGCKNVYAEDCTM-DSPHLDRVLRIKTNNCRGGRIENINMR-------RVKVGQCKEAV 376
Query: 118 SHPDDDFDPD 127
+ D++P+
Sbjct: 377 VKINLDYEPE 386
>gi|134292563|ref|YP_001116299.1| glycoside hydrolase family protein [Burkholderia vietnamiensis G4]
gi|134135720|gb|ABO56834.1| glycoside hydrolase, family 28 [Burkholderia vietnamiensis G4]
Length = 664
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 72/192 (37%), Gaps = 52/192 (27%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWD---EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+V E C G D I++KSG D EYG A H+ R +S + GSEM
Sbjct: 393 DVLCERCTFNTGDDCIAIKSGKDRDTEYGPA------KRHLIRDCTMNSGHGGITLGSEM 446
Query: 61 SGGISNVQVEKIHLYDS------LN-GIEFRTTKGRGGYIKQIVISDAEL---------- 103
GG+ + + + ++ LN I +T RGGY+K + L
Sbjct: 447 GGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVVLPNGVNLKGGG 506
Query: 104 ----------YNINVAFG----ACGN------------CGSHPDDDFDPDALPAIDQITF 137
N +VA G A GN C P +D P + +T
Sbjct: 507 YGSALLAGSPINASVALGVVTAAAGNPSAAQGGIVTFDCDYQPANDAVRTRPPVVQNVTI 566
Query: 138 KDIIGTNITIAG 149
D+ +N+T+ G
Sbjct: 567 SDVKASNVTLNG 578
>gi|297745346|emb|CBI40426.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 140 IIGTNITIAGNFTGIQEAPFANICLSNISL-LINPGSYNSWECSNIHGSSESVFPEPCPE 198
++ N+++A GI PF IC+SN+++ L W C+++ G S V P PC
Sbjct: 283 MVAENVSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCST 342
Query: 199 LENSSSNSSSTC 210
L + +S C
Sbjct: 343 LPDQGPEKTSLC 354
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVA 55
S N IEDC I G D +++KSGWDEYGIAY D H R L + S+A
Sbjct: 242 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAY-----DWHRERRLYMVAENVSMA 291
>gi|315570526|gb|ADU33267.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 404
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 5 VCIEDCIIAMGHDAISLKSGWDEYGIAYGR-PTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
V I I+ G D I+L D G + PT DV I + + G V+ GS SGG
Sbjct: 212 VHITGVNISTGDDCIAL----DANGKGKTKTPTEDVLIEDSHMYAGHGG-VSIGSVTSGG 266
Query: 64 ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNIN---VAFGACGNCGSHP 120
+ NV V + G+ ++ +GRGG ++ I + ++ ++ +A A N GS P
Sbjct: 267 LRNVTVRNCIFNGTNRGLFIKSRRGRGGLVEDIHYHNIQMVDLRKEGIAIAAIYN-GSDP 325
Query: 121 -----DDDFDP--DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISL 169
D ++P + P I + FK+I G ++ G+ E+P N+ +N+ +
Sbjct: 326 GLRSRDFYWEPVNETTPFIRNVEFKNIHGDSVLNPIFIVGLPESPIENVTFTNVKI 381
>gi|116792819|gb|ABK26513.1| unknown [Picea sitchensis]
gi|148907395|gb|ABR16831.1| unknown [Picea sitchensis]
Length = 429
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 22/205 (10%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGS-E 59
S++V I++C IA G D IS+ + ++++ I ++ G S+ + G
Sbjct: 228 SEHVMIQNCTIATGDDCISIVA-----------ESSNIQISELICGPGHGISIGSLGKYN 276
Query: 60 MSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYN------INVAFGA- 112
+S+V V L + NG+ +T +G GY + I+ ++ N IN + A
Sbjct: 277 TKDTVSDVVVNGASLSGTQNGLRIKTWQGGSGYAQGIIFQHVKMINVSNPIIINQNYCAP 336
Query: 113 CGNCGSHPDDDF-DPDALPAIDQITFKDIIGTNITI-AGNFTGIQEAPFANICLSNISLL 170
+C + P + + ++ +T+ DI GT+ T A AP NI L +ISL
Sbjct: 337 SSSCQNQPTTICNNQSSAVQVNNVTYTDITGTSATQDAIKLACSATAPCTNIVLEDISLQ 396
Query: 171 INPGSYNSWECSNIHGSSESVFPEP 195
++ G S +N+ GSS P
Sbjct: 397 LSNGDTASSLSANVQGSSNGQVAPP 421
>gi|20451636|emb|CAC83614.1| putative polygalacturonase [Erwinia chrysanthemi]
Length = 457
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 79/197 (40%), Gaps = 32/197 (16%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N+ I + +I D I++K+ + G +++I +L+ G S+ GSE S
Sbjct: 226 SQNIRITNNVIDCNDDHIAIKAEKPDSRFPNG-VVDNIYIANNVLKQGRGISI--GSETS 282
Query: 62 GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACG------- 114
GG++NV VE S+ GI ++ +G+GG +K + + ++ V G
Sbjct: 283 GGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMLDVEVPLVFSGYYQAAPI 342
Query: 115 ---------NCG------------SHPDDDFDPDALPAIDQITFKDIIGTNIT-IAGNFT 152
G + P FD P Q+T D+ T + AG
Sbjct: 343 VQAEVDKLLQAGGFTLGEQIYPPDTEPAQPFDKVKTPHFSQVTIVDLESTGRSKAAGYII 402
Query: 153 GIQEAPFANICLSNISL 169
G+ EAP + + +
Sbjct: 403 GVPEAPLSGFHFEQVRI 419
>gi|172064462|ref|YP_001812113.1| glycoside hydrolase family protein [Burkholderia ambifaria MC40-6]
gi|171996979|gb|ACB67897.1| glycoside hydrolase family 28 [Burkholderia ambifaria MC40-6]
Length = 664
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 70/191 (36%), Gaps = 52/191 (27%)
Query: 5 VCIEDCIIAMGHDAISLKSGWD---EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
V E C G D I++KSG D EYG A H+ R +S + GSEM
Sbjct: 394 VLCEGCTFNTGDDCIAIKSGKDRDTEYGPA------KRHLIRDCTMNSGHGGITLGSEMG 447
Query: 62 GGISNVQVEKIHLYDS------LN-GIEFRTTKGRGGYIKQIVISDAELYN--------- 105
GG+ + + + ++ LN I +T RGGY+K + L N
Sbjct: 448 GGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPNGVTLKGGGY 507
Query: 106 ---------------INVAFGACGN------------CGSHPDDDFDPDALPAIDQITFK 138
+ VA + GN C P +D P + +T
Sbjct: 508 GSALLAGSPVNASVPLGVATPSAGNPSAAQGGIVTFDCDYQPANDAVRTRPPVVQNVTIS 567
Query: 139 DIIGTNITIAG 149
D+ +N+T+ G
Sbjct: 568 DVKASNVTLNG 578
>gi|294776431|ref|ZP_06741909.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449757|gb|EFG18279.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 424
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N IE+C+ G DA+ +K+G ++ P ++ IR + + + GSEMS
Sbjct: 225 SRNFLIENCVFDQGDDAVVIKAGRNQNAWRLNTPCENIVIRHCNILKGH-TLLGIGSEMS 283
Query: 62 GGISNVQVEKIHLYDSLNGIEF-RTTKGRGGYIKQIVISDAE 102
GG+ NV + DS+ + F +T RGG+I+ I + + +
Sbjct: 284 GGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVK 325
>gi|409441796|ref|ZP_11268657.1| putative modular protein: Endo-polygalacturonase (N-term), Pectin
methylesterase (C-term) [Rhizobium mesoamericanum
STM3625]
gi|408746731|emb|CCM79902.1| putative modular protein: Endo-polygalacturonase (N-term), Pectin
methylesterase (C-term) [Rhizobium mesoamericanum
STM3625]
Length = 780
Score = 50.4 bits (119), Expect = 6e-04, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 27/187 (14%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS +V I + I+ G D I++K G PT V I L + G S+ GSE
Sbjct: 247 SSTDVTIAESYISTGDDNIAIKGG-------SAGPTAHVTIVGNHLYAGHGMSI--GSET 297
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
G+S+V + + L + NG+ ++ + RGG ++ I + L N
Sbjct: 298 QSGVSDVLITDMTLDGTTNGLRIKSDRSRGGLVRNIDFENVCLRNTRAPLVL-------- 349
Query: 121 DDDFDPDA----LPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNISLLINPGSY 176
D +D A LP IT ++I GT + G+ + L N +N G
Sbjct: 350 DTTYDATATGMLLPVYSSITLRNIQGTGGPLV--VRGVDALHSVGLLLDN----VNFGDA 403
Query: 177 NSWECSN 183
+ W+ +N
Sbjct: 404 SHWQVTN 410
>gi|150002759|ref|YP_001297503.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149931183|gb|ABR37881.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 462
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N IE+C+ G DA+ +K+G ++ P ++ IR + + + GSEMS
Sbjct: 263 SRNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCNILKGH-TLLGIGSEMS 321
Query: 62 GGISNVQVEKIHLYDSLNGIEF-RTTKGRGGYIKQIVISDAE 102
GG+ NV + DS+ + F +T RGG+I+ I + + +
Sbjct: 322 GGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVK 363
>gi|125599501|gb|EAZ39077.1| hypothetical protein OsJ_23509 [Oryza sativa Japonica Group]
Length = 498
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 36/187 (19%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEM 60
S NV + CII G D +S++ G T ++H++ ++ G S+ + G
Sbjct: 235 SKNVQVTGCIIKTGDDCMSIEDG-----------TENLHVKNMVCGPGHGISIGSLGDHN 283
Query: 61 S-GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
S ++NV V+ + LY + NG +T +G GY K IV + + N+ +
Sbjct: 284 SEAHVNNVTVDTVRLYGTTNGARIKTWQGGWGYAKNIVFQNMIMENV-----------WN 332
Query: 120 P---DDDFDPDALPAIDQ--------ITFKDIIGTNITI-AGNFTGIQEAPFANICLSNI 167
P D ++ A P +Q + FK+I GT+ + A + P I L ++
Sbjct: 333 PIIIDQNYCDSATPCKEQTSAVQVSNVVFKNIRGTSASKEAIKLDCSRNVPCQGITLKDV 392
Query: 168 SLLINPG 174
L I G
Sbjct: 393 KLTIKGG 399
>gi|224538432|ref|ZP_03678971.1| hypothetical protein BACCELL_03326 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519937|gb|EEF89042.1| hypothetical protein BACCELL_03326 [Bacteroides cellulosilyticus
DSM 14838]
Length = 435
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 14/117 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S +NV IE C G D I++KSG DE G + P+ ++ +R ++ + VA GSE+
Sbjct: 238 SCNNVLIEYCDFDTGDDCIAIKSGRDEDGRFWNIPSENIIVRNCRMKDGH-AGVAIGSEV 296
Query: 61 SGGISNVQVEKIHL----YDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC 113
+GG NV VE + D + I ++ RGG ++ + + N+ G C
Sbjct: 297 TGGCRNVWVENCRMDSPELDRI--IRIKSNAIRGGEVENLFVR-------NIFVGEC 344
>gi|254392545|ref|ZP_05007723.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706210|gb|EDY52022.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 462
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 23/178 (12%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
+ ++ I C D+I++KSG DE G G P+ ++ IR + G VA GSEMS
Sbjct: 262 TSDMLITGCRFHTEDDSIAVKSGRDEDGHRIGVPSRNIVIRDCVFSGRWG-GVAVGSEMS 320
Query: 62 GGISNVQVEKIHL--------YDSLNGIEFRTTKGRGG-----YIKQIVISDAELYNINV 108
GG+ +V E + Y+ + + +T K RGG YI++ + + +
Sbjct: 321 GGVRDVFAEDCRINPVDFPGRYNPRHPVFIKTNKKRGGSITGVYIRRFTGRAIDRDCVYL 380
Query: 109 AFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
G G P I I +D++ A + G+ PF + ++
Sbjct: 381 TTRYAGQQGERP---------AVIRDIRIEDMVHDGARRAIHLEGLDSDPFTGVHIAR 429
>gi|212695092|ref|ZP_03303220.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
gi|212662408|gb|EEB22982.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
Length = 475
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
+ N IEDC+ G DA+ +KSG ++ PT ++ +R L+ + + + GSE+S
Sbjct: 265 TRNFLIEDCVFEQGDDAVVIKSGRNQDAWRLNTPTENIVVRNCLVLAGQ-TLLGVGSEIS 323
Query: 62 GGISNVQVEKIHLYDSLNGIEF-RTTKGRGGYIKQIVIS 99
GG+ N+ + ++++ + F +T RG +++ + +
Sbjct: 324 GGVRNIYMHDCEAPNNVHRLFFIKTNHRRGAFVENVYME 362
>gi|28411798|dbj|BAC57273.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group]
gi|50508418|dbj|BAD30433.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group]
Length = 422
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 36/187 (19%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEM 60
S NV + CII G D +S++ G T ++H++ ++ G S+ + G
Sbjct: 235 SKNVQVTGCIIKTGDDCMSIEDG-----------TENLHVKNMVCGPGHGISIGSLGDHN 283
Query: 61 S-GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
S ++NV V+ + LY + NG +T +G GY K IV + + N+ +
Sbjct: 284 SEAHVNNVTVDTVRLYGTTNGARIKTWQGGWGYAKNIVFQNMIMENV-----------WN 332
Query: 120 P---DDDFDPDALPAIDQ--------ITFKDIIGTNITI-AGNFTGIQEAPFANICLSNI 167
P D ++ A P +Q + FK+I GT+ + A + P I L ++
Sbjct: 333 PIIIDQNYCDSATPCKEQTSAVQVSNVVFKNIRGTSASKEAIKLDCSRNVPCQGITLKDV 392
Query: 168 SLLINPG 174
L I G
Sbjct: 393 KLTIKGG 399
>gi|374376177|ref|ZP_09633835.1| Polygalacturonase [Niabella soli DSM 19437]
gi|373233017|gb|EHP52812.1| Polygalacturonase [Niabella soli DSM 19437]
Length = 437
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 32/188 (17%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S + + I+DC I+ G D + G T++VHI+ + G ++ GS
Sbjct: 219 SGNKILIKDCDISTGDDNFTCGGG-----------TSNVHIQNC--KYGYGHGLSIGSYT 265
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
GG+SN +E ++ GI ++ + RGG ++ + + ++ N+ + G +
Sbjct: 266 KGGVSNFLIEDCSFTNTECGIRIKSDRDRGGVVQNLTYRNIKMENVGMPILIYGAYMAKE 325
Query: 121 DD-----DFDP------------DALPAIDQITFKDIIGT--NITIAGNFTGIQEAPFAN 161
+ P D P ITF++I T N AG G+ EAP +N
Sbjct: 326 KEFRNLQKITPEIAAGYAREPLTDLTPVYKDITFENITATTQNGKRAGLIWGLPEAPASN 385
Query: 162 ICLSNISL 169
I +++
Sbjct: 386 IVFKKVTI 393
>gi|423239876|ref|ZP_17220991.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
gi|392644865|gb|EIY38599.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
Length = 462
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N IE+C+ G DA+ +K+G ++ P ++ IR + + + GSEMS
Sbjct: 263 SRNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGH-TLLGIGSEMS 321
Query: 62 GGISNVQVEKIHLYDSLNGIEF-RTTKGRGGYIKQIVISDAE 102
GG+ NV + DS+ + F +T RGG+I+ I + + +
Sbjct: 322 GGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVK 363
>gi|387904260|ref|YP_006334598.1| Polygalacturonase [Burkholderia sp. KJ006]
gi|387579152|gb|AFJ87867.1| Polygalacturonase [Burkholderia sp. KJ006]
Length = 664
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 74/192 (38%), Gaps = 52/192 (27%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWD---EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+V E C G D +++KSG D EYG A H+ R +S + GSEM
Sbjct: 393 DVLCERCTFNTGDDCVAIKSGKDRDTEYGPA------KRHLIRDCTMNSGHGGITLGSEM 446
Query: 61 SGGISNVQVEKIHLYDS------LN-GIEFRTTKGRGGYIKQIVISDAEL---------- 103
GG+ + + + ++ LN I +T RGGY+K + L
Sbjct: 447 GGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVVLPNGVNLKGGG 506
Query: 104 ----------YNINVAFGACGNCGSHP----------DDDFDP--DAL----PAIDQITF 137
N +VA G +P D D+ P DA+ P + +T
Sbjct: 507 YGSALLAGSPINASVALGVVTAAAGNPSAAQGGIVTFDCDYQPANDAVRTRPPVVQNVTI 566
Query: 138 KDIIGTNITIAG 149
D+ +N+T+ G
Sbjct: 567 SDVKASNVTLNG 578
>gi|325106411|ref|YP_004276065.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975259|gb|ADY54243.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 476
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
SS + +++ I D +K+G D G+ RP V IR + + G + GSE
Sbjct: 246 SSSWILVQNTDIDCNDDNFCIKAGRDADGLRVNRPCEYVVIRDCVARKGGGL-LTLGSET 304
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG--- 117
SGGI N+ I + N + ++ RGG+++ +++ + + ++ N
Sbjct: 305 SGGIRNIYASNIKGMATSNCLNIKSAVTRGGFVENVLLENVTMDSVGTVLQVNMNWNPAY 364
Query: 118 --SHPDDDFDPDALP----AIDQIT---------FKDIIGTNITIAG-----NFTGIQEA 157
S +D +++P A+ Q FK+I NI I G N G+ ++
Sbjct: 365 SYSELPKGYDYNSIPKHWKALLQKVEPKEKGIPIFKNIYMNNIHIKGAKRAINVVGLPQS 424
Query: 158 PFANICLSNISL 169
N+ L N+S+
Sbjct: 425 KVENVNLKNVSI 436
>gi|322436856|ref|YP_004219068.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321164583|gb|ADW70288.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 414
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 22/186 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQS---SSGSSVAFG 57
SS ++ I+ ++G D I++KSG A P D +++ SG ++ G
Sbjct: 205 SSSHIKIDHYFSSVGDDNIAIKSG------AINSPGPDAPSEDIVITDCIFESGHGLSIG 258
Query: 58 SEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGAC---- 113
SE++GG+ +V E+I + GI + + RG + D + ++ +
Sbjct: 259 SEIAGGVHHVHAERISFKGTDQGIRVKANRDRGNDTSDLTFKDITMDDVRTSILISEYYP 318
Query: 114 -----GNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNIS 168
G S P P I +++ N AG G+ E+P +I L N+S
Sbjct: 319 KAMPEGEVASAPITRL----TPHFHDIHIENVKSVNSDWAGVIVGLPESPVTDISLKNVS 374
Query: 169 LLINPG 174
+ G
Sbjct: 375 IQAKKG 380
>gi|319643181|ref|ZP_07997809.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520529|ref|ZP_08799916.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|423315312|ref|ZP_17293242.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|423315336|ref|ZP_17293266.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
gi|254835049|gb|EET15358.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317385085|gb|EFV66036.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392679549|gb|EIY72930.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|392679573|gb|EIY72954.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
Length = 462
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N IE+C+ G DA+ +K+G ++ P ++ IR + + + GSEMS
Sbjct: 263 SRNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGH-TLLGIGSEMS 321
Query: 62 GGISNVQVEKIHLYDSLNGIEF-RTTKGRGGYIKQIVISDAE 102
GG+ NV + DS+ + F +T RGG+I+ I + + +
Sbjct: 322 GGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVK 363
>gi|294816001|ref|ZP_06774644.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444344|ref|ZP_08219078.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328600|gb|EFG10243.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 477
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 23/178 (12%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
+ ++ I C D+I++KSG DE G G P+ ++ IR + G VA GSEMS
Sbjct: 277 TSDMLITGCRFHTEDDSIAVKSGRDEDGHRIGVPSRNIVIRDCVFSGRWG-GVAVGSEMS 335
Query: 62 GGISNVQVEKIHL--------YDSLNGIEFRTTKGRGG-----YIKQIVISDAELYNINV 108
GG+ +V E + Y+ + + +T K RGG YI++ + + +
Sbjct: 336 GGVRDVFAEDCRINPVDFPGRYNPRHPVFIKTNKKRGGSITGVYIRRFTGRAIDRDCVYL 395
Query: 109 AFGACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
G G P I I +D++ A + G+ PF + ++
Sbjct: 396 TTRYAGQQGERP---------AVIRDIRIEDMVHDGARRAIHLEGLDSDPFTGVHIAR 444
>gi|160892048|ref|ZP_02073051.1| hypothetical protein BACUNI_04508 [Bacteroides uniformis ATCC 8492]
gi|156858526|gb|EDO51957.1| polygalacturonase (pectinase) [Bacteroides uniformis ATCC 8492]
Length = 471
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 6/170 (3%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N IE+C G DA+ +KSG + G P ++ +R + + + GSE+S
Sbjct: 263 SRNFLIENCKFDQGDDAVVIKSGRNRDAWRLGTPCENIVVRNCQVMEGH-TLLGIGSELS 321
Query: 62 GGISNVQVEKIHLYDSLNGIEF-RTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
GG+ NV + + S++ + F +T + RGG ++ I + D + G + +
Sbjct: 322 GGVRNVYMHHCDVPASVHCLFFIKTNRRRGGIVENIYLEDVTCKDTEYLVGLDMDI-LYQ 380
Query: 121 DDDFDP---DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 167
+ P + L I+ I KDI + G + P +I + NI
Sbjct: 381 WRELVPTYEERLTRIEGIHVKDIRCGSADFVYELCGDERLPPKDITIRNI 430
>gi|150004702|ref|YP_001299446.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149933126|gb|ABR39824.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 471
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 6/170 (3%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N IE+C G DA+ +KSG + G P ++ +R + + + GSE+S
Sbjct: 263 SRNFLIENCKFDQGDDAVVIKSGRNRDAWRLGTPCENIVVRNCQVMEGH-TLLGIGSELS 321
Query: 62 GGISNVQVEKIHLYDSLNGIEF-RTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSHP 120
GG+ NV + + S++ + F +T + RGG ++ I + D + G + +
Sbjct: 322 GGVRNVYMHHCDVPASVHCLFFIKTNRRRGGIVENIYLEDVTCKDTEYLVGLDMDI-LYQ 380
Query: 121 DDDFDP---DALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 167
+ P + L I+ I KDI + G + P +I + NI
Sbjct: 381 WRELVPTYEERLTRIEGIHVKDIRCGSADFVYELCGDERLPPKDITIRNI 430
>gi|408794807|gb|AFU91418.1| polygalacturonase, partial [uncultured bacterium]
Length = 70
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 15 GHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGGISNVQVEKIHL 74
G D +++KSG G Y +P+ ++ +R+ L+++ G+ V GSEM+GG+ NV++E
Sbjct: 1 GDDCVAVKSGKIYMGRKYKKPSENISVRQCLMENGHGA-VTVGSEMAGGVRNVRIEDCLF 59
Query: 75 YDSLNGIEFRT 85
++ G+ +T
Sbjct: 60 RNTDRGLRIKT 70
>gi|309779639|ref|ZP_07674398.1| polygalacturonase transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|349616569|ref|ZP_08895706.1| hypothetical protein HMPREF0989_03952 [Ralstonia sp. 5_2_56FAA]
gi|308921580|gb|EFP67218.1| polygalacturonase transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|348612214|gb|EGY61836.1| hypothetical protein HMPREF0989_03952 [Ralstonia sp. 5_2_56FAA]
Length = 671
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
NV E+ G D I++KSG YG P D I+ + S G + GSEM GG
Sbjct: 400 NVLCENVTFNTGDDCIAIKSG-KNLDTGYG-PAQDHVIQNCTMNSGHGG-ITLGSEMGGG 456
Query: 64 ISNVQVEKIHLY------DSLN-GIEFRTTKGRGGYIKQIVISDAELYN 105
+ N+ + + +SLN I +T RGG++K +++ L N
Sbjct: 457 VQNIYARNLAMLNQFWATNSLNIAIRIKTNMNRGGFVKNFYVTNVSLPN 505
>gi|359479951|ref|XP_002270821.2| PREDICTED: polygalacturonase At1g48100-like [Vitis vinifera]
Length = 469
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 41/226 (18%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+S V +E+ I+ G D IS+++G +DV+I+ + + G ++ G
Sbjct: 258 NSQRVEVENSTISCGDDCISIQTG-----------CSDVNIQNI--KCGPGHGISIGGLG 304
Query: 61 SGG----ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF------ 110
G +SN+ V+ + D+L GI +T +G G +K ++ D E+ N+ V
Sbjct: 305 KDGTLACVSNIVVQNSIMVDTLYGIRIKTWQGGVGSVKSVIFLDIEVSNVKVPIMIDQFY 364
Query: 111 ---GACGNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSNI 167
G C N DA+ ++ IT+ I GT T A + P NI + N+
Sbjct: 365 CEGGTCRN---------KTDAV-SLTNITYNQINGTYATQAIHLACSDSIPCTNISMGNV 414
Query: 168 SLLINPGSYNSWE--CSNIHGSS-ESVFPEP--CPELENSSSNSSS 208
L + + + C N +G S +VFP C E N S +S
Sbjct: 415 LLTPSTTTKGLMQDLCWNSYGKSLATVFPPSLNCLETGNPLSKKAS 460
>gi|150388731|ref|YP_001318780.1| glycoside hydrolase [Alkaliphilus metalliredigens QYMF]
gi|149948593|gb|ABR47121.1| glycoside hydrolase, family 28 [Alkaliphilus metalliredigens QYMF]
Length = 519
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 14/182 (7%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S NV I ++G D I++KSG G + D+ IR ++ G + GSEM
Sbjct: 281 SCQNVKIIGVDFSVGDDCIAIKSGKLYLGQRLKIASQDIMIRNCHMKFGHGG-IVIGSEM 339
Query: 61 SGGISNVQVEKIHLYDSLNGIEFRTTKGRG--GYIKQIVISDAELYNINVAFGACGNCGS 118
+GG+ NV + ++ GI +T +GRG G I I + + + F
Sbjct: 340 AGGVKNVSAIRCIFEETDRGIRIKTRRGRGKDGVINGINAENIVMKKVLTPFVINTFYFC 399
Query: 119 HPDDDFD----------PDALPAIDQITFKDIIGTNITIAGNFT-GIQEAPFANICLSNI 167
PD + + P + + K++I + +A F G+ E NI L +I
Sbjct: 400 DPDGKTEYVWSKEKLPVDERTPVVKNVYLKNMICEDCEVAAGFIYGLPECKIENIILEDI 459
Query: 168 SL 169
+
Sbjct: 460 KV 461
>gi|414071001|ref|ZP_11406978.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
gi|410806622|gb|EKS12611.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
Length = 489
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 20/175 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S ++V I++C+ G D I++KSG + G + ++ I ++ G V GSE+
Sbjct: 289 SCNHVHIKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIENCHMKEGHG-GVVIGSEI 347
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVA-----FGA 112
SGG++NV V+ + DS + I +T RGG I+ I I + E+ + A +
Sbjct: 348 SGGVNNVFVQNCTM-DSPHLERAIRIKTNSVRGGLIEHIRIRNIEVGTVKNAIVINFYYE 406
Query: 113 CGNCGSHPDDDFDPDALP-AIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
G+ G FDP ID + K+++ + + G P +I L+N
Sbjct: 407 EGDAGQ-----FDPIVRDIKIDNLHCKNVLSKALYL----NGFARDPIKDITLTN 452
>gi|359452816|ref|ZP_09242155.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
gi|358050136|dbj|GAA78404.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
Length = 489
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 20/175 (11%)
Query: 1 SSDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
S ++V I++C+ G D I++KSG + G + ++ I ++ G V GSE+
Sbjct: 289 SCNHVHIKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIENCHMKEGHG-GVVIGSEI 347
Query: 61 SGGISNVQVEKIHLYDSLN---GIEFRTTKGRGGYIKQIVISDAELYNINVA-----FGA 112
SGG++NV V+ + DS + I +T RGG I+ I I + E+ + A +
Sbjct: 348 SGGVNNVFVQNCTM-DSPHLERAIRIKTNSVRGGLIEHIRIRNIEVGTVKNAIVINFYYE 406
Query: 113 CGNCGSHPDDDFDPDALP-AIDQITFKDIIGTNITIAGNFTGIQEAPFANICLSN 166
G+ G FDP ID + K+++ + + G P +I L+N
Sbjct: 407 EGDAGQ-----FDPIVRDIKIDNLHCKNVLSKALYL----NGFARDPIKDITLTN 452
>gi|345512498|ref|ZP_08792024.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229435434|gb|EEO45511.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 462
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N IE+C+ G DA+ +K+G ++ P ++ +R + + + GSEMS
Sbjct: 263 SRNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVVRHCNILKGH-TLLGIGSEMS 321
Query: 62 GGISNVQVEKIHLYDSLNGIEF-RTTKGRGGYIKQIVISDAE 102
GG+ NV + DS+ + F +T RGG+I+ I + + +
Sbjct: 322 GGVRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVK 363
>gi|423301868|ref|ZP_17279891.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
gi|408470959|gb|EKJ89491.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
Length = 752
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N +E+C G DA+ +K+G ++ P ++ IR + + + GSE+S
Sbjct: 553 SKNFLVENCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGH-TLLGIGSEIS 611
Query: 62 GGISNVQVEKIHLYDSLNGIEF-RTTKGRGGYIKQIVISDAELYNI 106
GGI N+ + + +S+ + F +T RGG+I+ I + D N+
Sbjct: 612 GGIRNIYMHDCTVPNSVMRLFFVKTNHRRGGFIENIYMKDVNAGNV 657
>gi|189459911|ref|ZP_03008696.1| hypothetical protein BACCOP_00544 [Bacteroides coprocola DSM 17136]
gi|189433376|gb|EDV02361.1| hypothetical protein BACCOP_00544 [Bacteroides coprocola DSM 17136]
Length = 236
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
+ N+ IE+ G D +++K G D G RP+ ++ IR + G V GSEMS
Sbjct: 29 TRNLLIENIEFNNGDDNVAIKCGRDNDGWNTNRPSENIIIRNCKFKGLHG--VVLGSEMS 86
Query: 62 GGISNVQVEKIHLYDSL--NGIEFRTTKGRGGYIKQIVISDAEL 103
G+ N+ +E Y GI +T RGG+++ I +++ +
Sbjct: 87 SGVQNIFIENC-TYGGYCKRGIYMKTNPDRGGFLRNIYVNNCQF 129
>gi|125557642|gb|EAZ03178.1| hypothetical protein OsI_25331 [Oryza sativa Indica Group]
Length = 415
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 30/150 (20%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEM 60
S NV + CII G D +S++ G T ++H++ ++ G S+ + G
Sbjct: 235 SKNVQVAGCIIKTGDDCMSIEDG-----------TENLHVKNMVCGPGHGISIGSLGDHN 283
Query: 61 S-GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
S ++NV V+ + LY + NG +T +G GY K IV + + N+ +
Sbjct: 284 SEAHVNNVTVDPVRLYGTTNGARIKTWQGGWGYAKNIVFQNMIMENV-----------WN 332
Query: 120 P---DDDFDPDALPAIDQIT---FKDIIGT 143
P D ++ A P +Q++ FK+I GT
Sbjct: 333 PIIIDQNYCDSATPCKEQVSNVVFKNIRGT 362
>gi|115359649|ref|YP_776787.1| glycoside hydrolase family protein [Burkholderia ambifaria AMMD]
gi|115284937|gb|ABI90453.1| glycoside hydrolase, family 28 [Burkholderia ambifaria AMMD]
Length = 665
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 73/192 (38%), Gaps = 52/192 (27%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWD---EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+V E C G D I++KSG D EYG A H+ R +S + GSEM
Sbjct: 394 DVLCERCTFNTGDDCIAIKSGKDRDTEYGPA------KRHLIRDCTMNSGHGGITLGSEM 447
Query: 61 SGGISNVQVEKIHLYDS------LN-GIEFRTTKGRGGYIKQIVISDAEL---------- 103
GG+ + + + ++ LN I +T RGGY+K + L
Sbjct: 448 GGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPNGVTLKGGG 507
Query: 104 ----------YNINVAFGACGNCGSHP----------DDDFDP--DAL----PAIDQITF 137
N +V G +P D D+ P DA+ P + +T
Sbjct: 508 YGSALLAGSPVNASVPLGVVTPSAGNPSAAQGGIVTFDCDYQPANDAVRTRPPVVQNVTI 567
Query: 138 KDIIGTNITIAG 149
D+ +N+T+ G
Sbjct: 568 SDVKASNVTLNG 579
>gi|224104077|ref|XP_002313308.1| predicted protein [Populus trichocarpa]
gi|222849716|gb|EEE87263.1| predicted protein [Populus trichocarpa]
Length = 376
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 15/197 (7%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEM 60
+ N+ I +C+I G D IS+ SG + +V + G S+ + G++
Sbjct: 189 TQNIRIRNCVIRTGDDCISIVSG-----------SKNVEATDITCGPGHGISIGSLGADN 237
Query: 61 SGG-ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
SG +SNV V + + + NG+ +T +G GY + IV + + N+ N
Sbjct: 238 SGAEVSNVFVNRATISGTTNGVRIKTWQGGSGYARNIVFQNVVMRNVTNPIIINQNYCDQ 297
Query: 120 PDDDFDPDALPAIDQITFKDIIGTNIT-IAGNFTGIQEAPFANICLSNISLLINPGSYNS 178
+ + I + +K+I GT+ + +A F + P I L ++++ +
Sbjct: 298 DSPCEEQTSAVQISNVMYKNIKGTSASDVAVKFDCSKNIPCRGILLQDVNIALEENGKPE 357
Query: 179 WECSNIHGSSE-SVFPE 194
C+N++ VFP+
Sbjct: 358 ASCANVNLRKRGDVFPQ 374
>gi|238024144|ref|YP_002908376.1| glycoside hydrolase [Burkholderia glumae BGR1]
gi|237878809|gb|ACR31141.1| Glycoside hydrolase [Burkholderia glumae BGR1]
Length = 673
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 3 DNVCIEDCIIAMGHDAISLKSGWD---EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSE 59
+NV + + G D I++KSG D EYG A H+ + +S + GSE
Sbjct: 401 NNVLCDGMVFNTGDDCIAIKSGKDLDTEYGAAQN------HVVQNCTMNSGHGGITLGSE 454
Query: 60 MSGGISNVQVEKIHLY------DSLN-GIEFRTTKGRGGYIKQIVISDAELYN 105
M GGI NV + + +SLN I +T RGG+++ ++ L N
Sbjct: 455 MGGGIENVYARNLTMLNQFWATNSLNIAIRIKTNMNRGGFVRNFYVNGVTLPN 507
>gi|226503533|ref|NP_001142092.1| uncharacterized protein LOC100274254 precursor [Zea mays]
gi|194707086|gb|ACF87627.1| unknown [Zea mays]
gi|413932713|gb|AFW67264.1| hypothetical protein ZEAMMB73_031497 [Zea mays]
Length = 487
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEM 60
S +V + +C I G D +S+++G T D+H+ +++ G S+ + G +
Sbjct: 280 SRDVQVTNCKIKTGDDCLSIEAG-----------THDLHVSQIVCGPGHGISIGSLGDDN 328
Query: 61 SGG-ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYN------INVAFGAC 113
S +S + ++ + LY + NG +T +G GY + I + ++ I+ +
Sbjct: 329 SRAEVSGITIDTVQLYGTTNGARIKTYQGGSGYARDITFQNMAMHGVENPIVIDQDYCDK 388
Query: 114 GNCGSHPDDDFDPDALPAID--QITFKDIIGTNITI-AGNFTGIQEAPFANICLSNISL- 169
S P + + A++ + F++I GT ++ A + P I L NISL
Sbjct: 389 RQATSPPCEAQGSSSSSAVEVSDVAFRNIRGTTVSKDAIKLSCSWNVPCHGITLQNISLE 448
Query: 170 -LINPGSYNSWECSNIH-GSSESVFPEPC 196
L G+ S C N +S +V P+PC
Sbjct: 449 MLGGKGTAES-TCRNARWRTSGTVLPQPC 476
>gi|221210443|ref|ZP_03583423.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD1]
gi|221169399|gb|EEE01866.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD1]
Length = 665
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 69/192 (35%), Gaps = 52/192 (27%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWD---EYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEM 60
+V EDC G D I++KSG + E G A H+ R +S + GSEM
Sbjct: 394 DVLCEDCTFNTGDDCIAIKSGKNRDTESGPA------KRHLVRNCTMNSGHGGITLGSEM 447
Query: 61 SGGISNVQVEKIHLYDS------LN-GIEFRTTKGRGGYIKQIVISDAELYN-------- 105
GG+ V + + ++ LN I +T RGGY+K + L N
Sbjct: 448 GGGVEQVYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPNGVTLKGGG 507
Query: 106 ----------------INVAFGACGN------------CGSHPDDDFDPDALPAIDQITF 137
+ V A GN C P +D P + +T
Sbjct: 508 YGSALLAGSPINASVPLGVVTPAAGNPSAAQGGIVTFDCDYQPANDAVRTRAPVVQNVTI 567
Query: 138 KDIIGTNITIAG 149
D+ N+T+ G
Sbjct: 568 ADVTARNVTLNG 579
>gi|7959983|gb|AAF71160.1|AF152758_1 polygalacturonase A [Actinidia chinensis]
Length = 463
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 83/208 (39%), Gaps = 18/208 (8%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
+ N+ I C+I G D IS+ SG + +R + G ++ GS
Sbjct: 269 TQNIHISSCVIETGDDCISIVSGGQK-------------VRVNDITCGPGHGISIGSLGY 315
Query: 62 GG----ISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCG 117
G +S+V V L + NG+ +T +G G I + E++N+ N
Sbjct: 316 GNSEAHVSDVVVNGAKLCGTTNGVRIKTWQGGSGSASNIKFQNVEMHNVENPIIIDQNYC 375
Query: 118 SHPDDDFDPDALPAIDQITFKDIIGTNIT-IAGNFTGIQEAPFANICLSNISLLINPGSY 176
+ + + I +K+I GT + +A F + P I L ++ L I G+
Sbjct: 376 DQDKPCQEQSSAVQVKNIFYKNIKGTCASNVAITFDCSKRFPCQGIVLEDVDLEIEGGAA 435
Query: 177 NSWECSNIHGSSESVFPEPCPELENSSS 204
C+N+ S V CPE E +S
Sbjct: 436 AKALCNNVELSETGVVSPHCPEGEEEAS 463
>gi|237712598|ref|ZP_04543079.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423229037|ref|ZP_17215442.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|423244877|ref|ZP_17225951.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
gi|229453919|gb|EEO59640.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634790|gb|EIY28702.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|392640918|gb|EIY34709.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
Length = 462
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
N IE+C+ G DA+ +K+G ++ P ++ IR + + + GSEMSGG
Sbjct: 265 NFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGH-TLLGIGSEMSGG 323
Query: 64 ISNVQVEKIHLYDSLNGIEF-RTTKGRGGYIKQIVISDAE 102
+ NV + DS+ + F +T RGG+I+ I + + +
Sbjct: 324 VRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVK 363
>gi|212690918|ref|ZP_03299046.1| hypothetical protein BACDOR_00406 [Bacteroides dorei DSM 17855]
gi|212666150|gb|EEB26722.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 462
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
N IE+C+ G DA+ +K+G ++ P ++ IR + + + GSEMSGG
Sbjct: 265 NFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGH-TLLGIGSEMSGG 323
Query: 64 ISNVQVEKIHLYDSLNGIEF-RTTKGRGGYIKQIVISDAE 102
+ NV + DS+ + F +T RGG+I+ I + + +
Sbjct: 324 VRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVK 363
>gi|386336153|ref|YP_006032323.1| polygalacturonase [Ralstonia solanacearum Po82]
gi|334198603|gb|AEG71787.1| polygalacturonase [Ralstonia solanacearum Po82]
Length = 686
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 3 DNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSG 62
DNV ED G D I++KSG AYG P + I+ ++ S G + GSEM G
Sbjct: 414 DNVLCEDMTFNTGDDCIAIKSG-KNLDTAYG-PAQNHVIQDCIMNSGHG-GITLGSEMGG 470
Query: 63 GISNVQVEKIHLYDS------LN-GIEFRTTKGRGGYIKQIVISDAELYN 105
G+ + + + ++ LN I +T RGGY++ + + L N
Sbjct: 471 GVQQIYARNLTMRNAFYATNPLNIAIRIKTNMNRGGYVRDFYVDNVTLPN 520
>gi|224056805|ref|XP_002299032.1| predicted protein [Populus trichocarpa]
gi|222846290|gb|EEE83837.1| predicted protein [Populus trichocarpa]
Length = 469
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSV-AFGSEM 60
S NV ++DC I G D IS+ +G ++ + ++R+ G S+ + G +
Sbjct: 244 STNVVLQDCKIGTGDDCISIVNG-----------SSGIKMKRIYCGPGHGVSIGSLGKDN 292
Query: 61 SGGI-SNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAFGACGNCGSH 119
S GI + V ++ + ++ NG+ +T +G GY++ + + + N++
Sbjct: 293 STGIVAKVVLDTAFISETTNGVRIKTWQGGNGYVRGVRFENVRMDNVDNPIIIDQFYCDS 352
Query: 120 PDDDFDPDALPAIDQITFKDIIGTNIT-IAGNFTGIQEAPFANICLSNISLLINPGSYNS 178
P + + I +I +++I GT + A F P +NI LSN++L + + +
Sbjct: 353 PASCQNKTSAVKISEIMYRNISGTTKSEKAMTFACSDSVPCSNIVLSNVNLEMEDSTVET 412
Query: 179 WECSNIHG 186
+ C++ G
Sbjct: 413 Y-CNSAEG 419
>gi|189467900|ref|ZP_03016685.1| hypothetical protein BACINT_04292 [Bacteroides intestinalis DSM
17393]
gi|189436164|gb|EDV05149.1| FG-GAP repeat protein [Bacteroides intestinalis DSM 17393]
Length = 1068
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S N IEDC G DA+ +K+G ++ P ++ IR + + + GSEMS
Sbjct: 266 SRNFLIEDCKFDQGDDAVVIKAGRNQDAWRLDTPCENIVIRNCDIIKGH-TLLGIGSEMS 324
Query: 62 GGISNVQVEKIHLYDSLNGIEF-RTTKGRGGYIKQI 96
GGI NV + DS+ + F +T RGG+I+ I
Sbjct: 325 GGIRNVYMHDCAAPDSVFRLFFAKTNHRRGGFIENI 360
>gi|265752277|ref|ZP_06088070.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|263237069|gb|EEZ22539.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 462
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 4 NVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMSGG 63
N IE+C+ G DA+ +K+G ++ P ++ IR + + + GSEMSGG
Sbjct: 265 NFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGH-TLLGIGSEMSGG 323
Query: 64 ISNVQVEKIHLYDSLNGIEF-RTTKGRGGYIKQIVISDAE 102
+ NV + DS+ + F +T RGG+I+ I + + +
Sbjct: 324 VRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVK 363
>gi|265754983|ref|ZP_06089897.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513278|ref|ZP_08792800.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229437102|gb|EEO47179.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|263234594|gb|EEZ20173.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 523
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 66/169 (39%), Gaps = 9/169 (5%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSSSGSSVAFGSEMS 61
S NV +E C + G D ++K G +E G G +V IR L ++ G + GSE
Sbjct: 272 SKNVLVEYCTMNCGDDCYAIKGGRNEEGARMGISAENVIIRNCLAKAGHG-GLTTGSETG 330
Query: 62 GGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINVAF--------GAC 113
GGI N+ + + F+T + R G + I + N+N F
Sbjct: 331 GGIKNIYAYNCVFDGTDMPLRFKTRRPRTGITENIFYERLRIKNVNTVFVWDLLGSYNFV 390
Query: 114 GNCGSHPDDDFDPDALPAIDQITFKDIIGTNITIAGNFTGIQEAPFANI 162
G + P + + K+ I + + GI E P +NI
Sbjct: 391 GELANRLPLRPVTKLTPTVRNVCVKNFIVESANCFISARGIPELPISNI 439
>gi|399087913|ref|ZP_10753337.1| endopolygalacturonase [Caulobacter sp. AP07]
gi|398031883|gb|EJL25254.1| endopolygalacturonase [Caulobacter sp. AP07]
Length = 458
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 78/200 (39%), Gaps = 39/200 (19%)
Query: 2 SDNVCIEDCIIAMGHDAISLKSGWDEYGIAYGRPTTDVHIRRVLLQSS----SGSSVAFG 57
S +V I + +I++G D +++KS + P + +L S +G + G
Sbjct: 228 SRHVVITNNVISVGDDIVAIKSNGPD-------PRHPDAVSSDILISGNTILAGRGICIG 280
Query: 58 SEMSGGISNVQVEKIHLYDSLNGIEFRTTKGRGGYIKQIVISDAELYNINV--------- 108
S SGG++ V+VE S+ G+ +T +G+GG ++ +V + + N+
Sbjct: 281 SGTSGGVTRVRVENNSFDGSMYGLRIKTMRGKGGKVRDVVFKNNRMKNVETPLVFTSYYE 340
Query: 109 ----------------AFGACGNCGSHPDDDFDP---DALPAIDQITFKDIIGTNITIAG 149
F P D P D P + I + T +AG
Sbjct: 341 YRPLDLKAATALLQPGGFLLGNQIWPGPTDPAQPIAADKTPDMADIVVDGLTATGADLAG 400
Query: 150 NFTGIQEAPFANICLSNISL 169
G+ E P A + L ++ +
Sbjct: 401 IVVGLPERPIAGLTLRDVRI 420
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,658,658,527
Number of Sequences: 23463169
Number of extensions: 151499920
Number of successful extensions: 351218
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 788
Number of HSP's that attempted gapping in prelim test: 348566
Number of HSP's gapped (non-prelim): 1802
length of query: 223
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 86
effective length of database: 9,144,741,214
effective search space: 786447744404
effective search space used: 786447744404
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)