Query 038344
Match_columns 383
No_of_seqs 601 out of 3059
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 17:17:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038344.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038344hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 2.9E-31 9.8E-36 224.7 16.7 143 3-183 7-162 (169)
2 2xai_A ASB-9, ankyrin repeat a 100.0 2.8E-27 9.7E-32 214.2 19.5 161 1-185 4-194 (261)
3 2f8y_A Notch homolog 1, transl 100.0 3.6E-27 1.2E-31 207.9 19.6 161 1-184 26-218 (223)
4 3v30_A DNA-binding protein rfx 100.0 9.5E-28 3.3E-32 203.2 15.0 147 1-184 3-162 (172)
5 1ihb_A P18-INK4C(INK6), cyclin 100.0 8.2E-28 2.8E-32 201.3 13.9 142 2-182 7-162 (162)
6 3v31_A Ankyrin repeat family A 100.0 1.6E-27 5.6E-32 200.7 15.4 146 1-184 4-162 (167)
7 1oy3_D Transcription factor in 100.0 2.6E-27 8.9E-32 215.9 17.6 163 1-185 10-253 (282)
8 2dzn_A Probable 26S proteasome 99.9 1.1E-26 3.7E-31 205.4 20.5 162 1-184 3-202 (228)
9 4b93_B Ankyrin repeat domain-c 99.9 2.9E-27 9.9E-32 215.3 16.7 162 2-185 13-213 (269)
10 2y1l_E Darpin-8.4; hydrolase-i 99.9 4.3E-27 1.5E-31 198.8 16.5 141 2-180 16-169 (169)
11 2rfm_A Putative ankyrin repeat 99.9 2.3E-27 8E-32 204.5 14.8 142 1-180 36-190 (192)
12 1yyh_A HN1;, notch 1, ankyrin 99.9 4.6E-27 1.6E-31 211.8 16.5 147 1-185 58-218 (253)
13 4g8k_A 2-5A-dependent ribonucl 99.9 6.2E-27 2.1E-31 219.7 17.7 113 54-184 165-300 (337)
14 3utm_A Tankyrase-1; tankyrase, 99.9 1.5E-26 5E-31 217.3 20.1 162 1-185 59-308 (351)
15 2rfa_A Transient receptor pote 99.9 1.7E-26 5.9E-31 204.9 19.4 159 1-184 4-185 (232)
16 3f6q_A Integrin-linked protein 99.9 5.2E-27 1.8E-31 200.1 15.3 148 1-185 6-166 (179)
17 3d9h_A CDNA FLJ77766, highly s 99.9 2.4E-26 8.1E-31 211.0 19.8 160 1-184 60-249 (285)
18 1ikn_D Protein (I-kappa-B-alph 99.9 3.1E-27 1.1E-31 210.4 12.9 161 1-183 9-210 (236)
19 3hra_A Ankyrin repeat family p 99.9 1.2E-26 4E-31 201.2 16.0 155 1-186 6-174 (201)
20 3aji_A 26S proteasome non-ATPa 99.9 2.6E-26 9E-31 203.4 18.4 161 2-184 8-199 (231)
21 3b7b_A Euchromatic histone-lys 99.9 5.3E-26 1.8E-30 202.3 20.2 161 1-184 12-204 (237)
22 1k1a_A B-cell lymphoma 3-encod 99.9 6.3E-26 2.2E-30 202.0 20.2 161 1-184 10-210 (241)
23 1s70_B 130 kDa myosin-binding 99.9 4.5E-26 1.5E-30 209.9 19.0 164 2-185 42-260 (299)
24 1oy3_D Transcription factor in 99.9 3.2E-26 1.1E-30 208.7 16.8 142 30-187 2-222 (282)
25 1awc_B Protein (GA binding pro 99.9 3.9E-26 1.3E-30 189.6 15.6 136 2-176 4-152 (153)
26 2rfa_A Transient receptor pote 99.9 2.7E-26 9.3E-31 203.6 15.3 152 1-185 38-225 (232)
27 3twr_A Tankyrase-2; ankyrin re 99.9 1.3E-26 4.3E-31 194.8 12.3 142 2-181 10-164 (165)
28 1wdy_A 2-5A-dependent ribonucl 99.9 1.7E-25 5.7E-30 203.8 20.4 164 1-183 40-279 (285)
29 3aji_A 26S proteasome non-ATPa 99.9 4.2E-26 1.4E-30 202.1 15.2 160 1-183 41-231 (231)
30 4b93_B Ankyrin repeat domain-c 99.9 5.8E-27 2E-31 213.3 9.8 144 1-182 87-244 (269)
31 4hbd_A KN motif and ankyrin re 99.9 5.9E-26 2E-30 207.4 16.4 144 1-180 112-273 (276)
32 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.1E-25 3.7E-30 187.2 15.0 139 2-179 4-155 (156)
33 2pnn_A Transient receptor pote 99.9 2.8E-26 9.4E-31 208.9 11.3 149 1-183 55-260 (273)
34 1yyh_A HN1;, notch 1, ankyrin 99.9 1.8E-25 6.2E-30 201.3 16.5 145 1-182 91-248 (253)
35 3jxi_A Vanilloid receptor-rela 99.9 1.3E-26 4.4E-31 209.4 8.5 150 1-184 47-252 (260)
36 1k1a_A B-cell lymphoma 3-encod 99.9 6.8E-26 2.3E-30 201.8 13.0 158 1-181 47-240 (241)
37 2etb_A Transient receptor pote 99.9 4.6E-26 1.6E-30 205.4 11.4 146 1-183 44-247 (256)
38 3hra_A Ankyrin repeat family p 99.9 6.3E-25 2.1E-29 190.3 17.9 142 1-180 40-201 (201)
39 1ikn_D Protein (I-kappa-B-alph 99.9 1.3E-25 4.6E-30 199.8 13.5 139 31-185 2-179 (236)
40 2fo1_E LIN-12 protein; beta-ba 99.9 4E-25 1.4E-29 210.6 17.6 160 1-182 167-371 (373)
41 3ljn_A Hypothetical protein; a 99.9 1E-25 3.5E-30 213.7 13.4 162 2-183 22-270 (364)
42 1n11_A Ankyrin; clathrin, BAND 99.9 1E-24 3.5E-29 211.8 19.3 153 13-185 189-372 (437)
43 3eu9_A Huntingtin-interacting 99.9 1.2E-24 4E-29 193.3 18.0 160 2-184 11-204 (240)
44 1wdy_A 2-5A-dependent ribonucl 99.9 3.1E-24 1.1E-28 195.4 20.4 168 2-186 7-215 (285)
45 2dzn_A Probable 26S proteasome 99.9 9E-25 3.1E-29 193.0 15.3 155 1-179 37-227 (228)
46 3b7b_A Euchromatic histone-lys 99.9 2.4E-24 8.2E-29 191.5 18.0 151 1-174 45-227 (237)
47 3kea_A K1L; tropism, ANK repea 99.9 2.5E-25 8.6E-30 204.2 11.0 159 1-186 32-224 (285)
48 2xai_A ASB-9, ankyrin repeat a 99.9 1.1E-24 3.9E-29 197.1 14.8 157 1-183 37-223 (261)
49 2etb_A Transient receptor pote 99.9 8E-25 2.7E-29 197.2 13.2 149 1-184 3-208 (256)
50 1n11_A Ankyrin; clathrin, BAND 99.9 4E-24 1.4E-28 207.6 19.0 162 1-185 15-207 (437)
51 3d9h_A CDNA FLJ77766, highly s 99.9 2.1E-24 7.2E-29 198.0 15.2 156 1-183 93-280 (285)
52 3utm_A Tankyrase-1; tankyrase, 99.9 3.8E-24 1.3E-28 200.8 16.8 163 2-186 26-276 (351)
53 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.6E-25 1.2E-29 197.8 9.2 146 1-185 6-167 (239)
54 2f8y_A Notch homolog 1, transl 99.9 1.4E-24 4.9E-29 191.1 12.7 153 14-185 2-186 (223)
55 2fo1_E LIN-12 protein; beta-ba 99.9 1E-24 3.4E-29 207.9 11.7 163 1-185 126-341 (373)
56 1sw6_A Regulatory protein SWI6 99.9 1.6E-24 5.3E-29 202.9 12.4 141 1-162 132-325 (327)
57 3kea_A K1L; tropism, ANK repea 99.9 1.6E-24 5.3E-29 198.9 11.7 135 13-183 9-155 (285)
58 1d9s_A Cyclin-dependent kinase 99.9 1.6E-24 5.4E-29 176.2 10.3 123 1-182 13-136 (136)
59 2pnn_A Transient receptor pote 99.9 2.3E-24 8E-29 196.1 10.8 148 1-184 14-220 (273)
60 2jab_A H10-2-G3; HER2, darpin, 99.9 1.2E-23 4E-28 171.1 13.8 121 2-180 16-136 (136)
61 3eu9_A Huntingtin-interacting 99.9 3.6E-23 1.2E-27 183.6 18.1 164 1-183 43-236 (240)
62 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.4E-23 8.2E-28 166.0 15.1 124 1-182 3-126 (126)
63 3jxi_A Vanilloid receptor-rela 99.9 2E-24 6.8E-29 195.0 9.7 151 1-184 6-212 (260)
64 4g8k_A 2-5A-dependent ribonucl 99.9 1.5E-23 5.2E-28 196.6 15.9 141 1-184 169-328 (337)
65 4gpm_A Engineered protein OR26 99.9 1.6E-23 5.5E-28 176.9 14.1 114 1-148 38-164 (169)
66 1s70_B 130 kDa myosin-binding 99.9 1.3E-23 4.5E-28 193.3 13.9 128 1-162 74-274 (299)
67 3t8k_A Uncharacterized protein 99.9 3.9E-24 1.3E-28 183.6 7.3 143 1-181 7-178 (186)
68 1bi7_B P16INK4A, MTS1, multipl 99.9 1.1E-23 3.9E-28 175.3 9.4 125 1-160 13-151 (156)
69 2rfm_A Putative ankyrin repeat 99.9 1.3E-22 4.6E-27 174.6 13.6 121 30-184 28-161 (192)
70 4hbd_A KN motif and ankyrin re 99.9 3.9E-23 1.3E-27 188.6 9.6 146 2-184 78-244 (276)
71 3v30_A DNA-binding protein rfx 99.9 2.2E-22 7.6E-27 170.0 12.9 122 1-156 37-171 (172)
72 1sw6_A Regulatory protein SWI6 99.9 8.8E-23 3E-27 190.9 9.5 148 12-184 106-310 (327)
73 3c5r_A BARD-1, BRCA1-associate 99.9 7.5E-23 2.6E-27 166.4 7.9 124 1-182 11-134 (137)
74 3v31_A Ankyrin repeat family A 99.9 1.3E-21 4.5E-26 164.4 13.7 116 36-185 2-130 (167)
75 1bi7_B P16INK4A, MTS1, multipl 99.9 1.2E-22 4.2E-27 169.0 7.2 120 31-185 6-139 (156)
76 3twr_A Tankyrase-2; ankyrin re 99.9 1.3E-21 4.4E-26 164.1 13.4 118 33-184 4-135 (165)
77 3aaa_C Myotrophin, protein V-1 99.9 5.6E-22 1.9E-26 158.1 10.4 107 2-162 9-115 (123)
78 2vge_A RELA-associated inhibit 99.9 4.6E-22 1.6E-26 176.5 10.1 102 50-185 47-151 (229)
79 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.3E-21 7.8E-26 146.7 11.1 93 56-182 1-93 (93)
80 3ehr_A Osteoclast-stimulating 99.9 9.5E-22 3.3E-26 173.3 10.2 126 1-184 74-200 (222)
81 3ljn_A Hypothetical protein; a 99.9 5.5E-22 1.9E-26 187.9 9.2 145 1-183 139-315 (364)
82 3f6q_A Integrin-linked protein 99.9 5.8E-21 2E-25 162.5 14.0 117 35-185 3-133 (179)
83 1awc_B Protein (GA binding pro 99.8 7.6E-21 2.6E-25 157.4 12.4 114 37-184 2-127 (153)
84 2y1l_E Darpin-8.4; hydrolase-i 99.8 1E-20 3.5E-25 159.5 13.0 119 32-184 9-140 (169)
85 3deo_A Signal recognition part 99.8 1E-20 3.6E-25 161.6 12.7 106 2-162 46-152 (183)
86 1ihb_A P18-INK4C(INK6), cyclin 99.8 8.9E-21 3.1E-25 158.3 11.7 111 1-145 39-162 (162)
87 1dcq_A PYK2-associated protein 99.8 2.8E-20 9.6E-25 169.8 15.0 130 2-183 132-264 (278)
88 3ui2_A Signal recognition part 99.8 1.3E-20 4.6E-25 168.6 11.7 127 2-183 47-186 (244)
89 1ycs_B 53BP2, P53BP2; ankyrin 99.8 4.1E-21 1.4E-25 171.4 6.8 127 2-162 39-190 (239)
90 1bd8_A P19INK4D CDK4/6 inhibit 99.8 5.4E-20 1.8E-24 152.6 10.9 112 37-184 2-127 (156)
91 3lvq_E ARF-GAP with SH3 domain 99.8 6.1E-20 2.1E-24 181.3 13.3 131 3-185 135-268 (497)
92 2b0o_E UPLC1; arfgap, structur 99.8 6.3E-20 2.1E-24 169.4 12.3 136 3-190 154-293 (301)
93 3jue_A Arfgap with coiled-coil 99.8 1.6E-19 5.3E-24 170.9 13.3 126 2-183 201-327 (368)
94 3c5r_A BARD-1, BRCA1-associate 99.8 5.8E-19 2E-23 143.2 12.8 100 52-185 5-104 (137)
95 1n0q_A 3ANK, 3 ankyrin repeats 99.8 6.3E-19 2.1E-23 133.1 11.6 91 1-145 3-93 (93)
96 3t8k_A Uncharacterized protein 99.8 5.6E-20 1.9E-24 157.6 6.1 116 1-150 39-184 (186)
97 2aja_A Ankyrin repeat family p 99.8 2.3E-21 7.9E-26 184.1 -3.4 137 2-183 94-251 (376)
98 2l6b_A NR1C; ankyrin, consensu 99.8 1.7E-19 5.7E-24 141.8 7.7 99 52-184 4-102 (115)
99 3aaa_C Myotrophin, protein V-1 99.8 1.3E-18 4.4E-23 138.5 11.3 97 54-184 4-100 (123)
100 1d9s_A Cyclin-dependent kinase 99.8 6.1E-19 2.1E-23 143.0 8.1 100 50-184 5-105 (136)
101 2l6b_A NR1C; ankyrin, consensu 99.8 5.2E-19 1.8E-23 138.9 7.3 103 1-157 10-112 (115)
102 3ehr_A Osteoclast-stimulating 99.7 1.3E-18 4.4E-23 153.1 7.8 101 52-185 68-168 (222)
103 2jab_A H10-2-G3; HER2, darpin, 99.7 4.7E-18 1.6E-22 137.7 9.5 98 53-184 10-107 (136)
104 2vge_A RELA-associated inhibit 99.7 5.6E-18 1.9E-22 150.1 10.4 115 19-185 1-115 (229)
105 2zgd_A 3 repeat synthetic anky 99.7 6.9E-18 2.3E-22 131.7 8.9 92 51-176 18-109 (110)
106 1n0r_A 4ANK, 4 ankyrin repeats 99.7 2.4E-17 8.4E-22 130.8 11.9 95 56-184 1-95 (126)
107 2b0o_E UPLC1; arfgap, structur 99.7 8.7E-18 3E-22 155.1 7.2 105 1-162 191-295 (301)
108 3deo_A Signal recognition part 99.7 1.9E-17 6.5E-22 141.3 8.0 98 53-185 40-138 (183)
109 3ui2_A Signal recognition part 99.7 4.3E-18 1.5E-22 152.3 2.9 115 36-185 14-139 (244)
110 2aja_A Ankyrin repeat family p 99.7 4.3E-18 1.5E-22 161.6 1.9 130 13-182 76-224 (376)
111 3lvq_E ARF-GAP with SH3 domain 99.7 1.1E-16 3.9E-21 157.9 9.3 105 1-162 172-276 (497)
112 1dcq_A PYK2-associated protein 99.6 1.3E-15 4.6E-20 138.7 11.2 66 50-145 198-263 (278)
113 2zgd_A 3 repeat synthetic anky 99.6 1.7E-15 5.9E-20 117.9 10.2 80 2-123 26-105 (110)
114 3jue_A Arfgap with coiled-coil 99.5 2.5E-14 8.4E-19 135.2 9.8 98 54-185 196-296 (368)
115 4ev6_A Magnesium transport pro 60.1 13 0.00043 33.8 5.7 24 296-319 278-301 (339)
116 2iub_A CORA, divalent cation t 52.5 9.8 0.00033 35.0 3.6 27 296-322 302-332 (363)
117 3zrh_A Ubiquitin thioesterase 43.7 1.1E+02 0.0039 28.3 8.9 66 6-78 25-90 (454)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=2.9e-31 Score=224.68 Aligned_cols=143 Identities=32% Similarity=0.461 Sum_probs=132.2
Q ss_pred hHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHcCC
Q 038344 3 ILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAMEGH 69 (383)
Q Consensus 3 pLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~g~ 69 (383)
+|+.| |..|+.++|+.|++.|+++ +.+|.+|+||||+|+..++ ++.+|.+|+||||+|+++|+
T Consensus 7 ~L~~A---a~~G~~~~v~~Ll~~Gadv-n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 7 RLIEA---AENGNKDRVKDLIENGADV-NASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHH---HHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHH---HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCC
Confidence 56666 5699999999999999998 8899999999999999998 67889999999999999999
Q ss_pred HHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhccccccccc
Q 038344 70 IDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAV 149 (383)
Q Consensus 70 ~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~ 149 (383)
.+++++|+++|++ +|.+|.+|+||||+|+..|+.++ +++|++. |+|++.+
T Consensus 83 ~~~v~~Ll~~gad------------------vn~~d~~G~TpLh~A~~~g~~~~-----------v~~Ll~~-gad~~~~ 132 (169)
T 4gpm_A 83 KEVVKLLISKGAD------------------VNAKDSDGRTPLHHAAENGHKEV-----------VKLLISK-GADVNTS 132 (169)
T ss_dssp HHHHHHHHHTTCC------------------TTCCCTTSCCHHHHHHHTTCHHH-----------HHHHHHT-TCCTTCC
T ss_pred HHHHHHHHHCcCC------------------CCCCCCCCCCHHHHHHHcCCHHH-----------HHHHHHc-CCCcccc
Confidence 9999999999988 89999999999999999999999 9999996 9999999
Q ss_pred ccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCC
Q 038344 150 NANGFTAWDILAQSKRDIKYWEIGELLRRARGNS 183 (383)
Q Consensus 150 n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~ 183 (383)
|.+|+||||+|+. .++.+++++|+++||+.
T Consensus 133 d~~G~TpL~~A~~----~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 133 DSDGRTPLDLARE----HGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp CTTSCCHHHHHHH----TTCHHHHHHHHTC----
T ss_pred CCCCCCHHHHHHH----cCCHHHHHHHHHCCCCc
Confidence 9999999999999 88999999999999987
No 2
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.95 E-value=2.8e-27 Score=214.25 Aligned_cols=161 Identities=18% Similarity=0.168 Sum_probs=142.8
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHc
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAME 67 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~ 67 (383)
+||||+|+ ..|+.+++++|++++.++ +..|.+|+||||+|+..|+ ++.+|.+|+||||+|+..
T Consensus 4 ~t~L~~A~---~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 79 (261)
T 2xai_A 4 WSPMHEAA---IHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVS 79 (261)
T ss_dssp CCHHHHHH---HHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCHHHHHH---HcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 59999995 499999999999999987 8889999999999999998 677899999999999999
Q ss_pred CCHHHHHHHHHcCCCCCch-----------------HHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhc
Q 038344 68 GHIDVLEELVRAKPDAASA-----------------PLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITY 130 (383)
Q Consensus 68 g~~~iv~~Ll~~~~~~~~~-----------------~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~ 130 (383)
|+.+++++|+++|++.... .+++|++ .+.++|.+|.+|+||||+|+..|+.++
T Consensus 80 ~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~------- 149 (261)
T 2xai_A 80 GSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIA---YGGNIDHKISHLGTPLYLACENQQRAC------- 149 (261)
T ss_dssp TCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHH---TTCCTTCCBTTTBCHHHHHHHTTCHHH-------
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHH---cCCCCCcCCCCCCCHHHHHHHhCCHHH-------
Confidence 9999999999999876432 4555555 677889999999999999999999999
Q ss_pred hhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCCC
Q 038344 131 KSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSAK 185 (383)
Q Consensus 131 ~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 185 (383)
+++|++. |+++|. |.+|.||||+|+. .++.+++++|+++|+++..
T Consensus 150 ----v~~Ll~~-g~~~~~-~~~g~t~Lh~A~~----~~~~~~v~~Ll~~gad~~~ 194 (261)
T 2xai_A 150 ----VKKLLES-GADVNQ-GKGQDSPLHAVAR----TASEELACLLMDFGADTQA 194 (261)
T ss_dssp ----HHHHHHH-TCCTTC-CBTTBCHHHHHHH----HTCHHHHHHHHHTTCCTTC
T ss_pred ----HHHHHHc-CCCCCC-CCCCCChHHHHHH----cCCHHHHHHHHHcCCCCCC
Confidence 9999996 999985 8899999999999 7888999999999998754
No 3
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=3.6e-27 Score=207.87 Aligned_cols=161 Identities=20% Similarity=0.182 Sum_probs=115.2
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC--------------ccccCCCCCcHHHHHHH
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK--------------CSATDVDGRNALHLAAM 66 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~--------------~~~~d~~G~tpLh~A~~ 66 (383)
+||||+|+ ..|+.+++++|++.++++ +..|..|+||||+|+..|+ ++..|.+|.||||+|+.
T Consensus 26 ~t~L~~A~---~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 101 (223)
T 2f8y_A 26 ETALHLAA---RYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR 101 (223)
T ss_dssp CCHHHHHH---HTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHH
T ss_pred CchHHHHH---HcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHH
Confidence 58999995 499999999999999988 7889999999999999998 45668899999999999
Q ss_pred cCCHHHHHHHHHcCCCCCch------------------HHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhh
Q 038344 67 EGHIDVLEELVRAKPDAASA------------------PLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHI 128 (383)
Q Consensus 67 ~g~~~iv~~Ll~~~~~~~~~------------------~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l 128 (383)
.|+.+++++|++++++.... .+++|++ .+.+++.+|.+|+||||+|+..|+.++
T Consensus 102 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~----- 173 (223)
T 2f8y_A 102 LAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLK---NGANKDMQNNREETPLFLAAREGSYET----- 173 (223)
T ss_dssp HTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHH---TTCCTTCCCTTCCCHHHHHHHHTCHHH-----
T ss_pred hCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHH---cCCCCCCcCCCCcCHHHHHHHcCCHHH-----
Confidence 99999999999998874321 2333333 344455555555555555555555555
Q ss_pred hchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCC
Q 038344 129 TYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSA 184 (383)
Q Consensus 129 ~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~ 184 (383)
+++|++. |++++.+|..|.||+|+|+. .++.+++++|+++|+...
T Consensus 174 ------v~~Ll~~-ga~~~~~~~~g~t~l~~A~~----~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 174 ------AKVLLDH-FANRDITDHMDRLPRDIAQE----RMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp ------HHHHHHT-TCCTTCCCTTCCCHHHHHHH----TTCHHHHHHHHHTTCSSC
T ss_pred ------HHHHHHc-CCCCccccccCCCHHHHHHH----hcchHHHHHHHHcCCCcc
Confidence 5555553 55555555555555555555 455555555555555543
No 4
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=9.5e-28 Score=203.16 Aligned_cols=147 Identities=22% Similarity=0.262 Sum_probs=138.0
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHc
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAME 67 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~ 67 (383)
.||||.|+ ..|+.++++.|++.+++..+..|..|+||||+|+..|+ ++.+|.+|.||||+|+..
T Consensus 3 ~~~L~~A~---~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 79 (172)
T 3v30_A 3 SLSIHQLA---AQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTG 79 (172)
T ss_dssp -CCHHHHH---HTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHT
T ss_pred hhhHHHHH---HcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHC
Confidence 48999995 59999999999999999779999999999999999999 677889999999999999
Q ss_pred CCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhccccccc
Q 038344 68 GHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVN 147 (383)
Q Consensus 68 g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~ 147 (383)
|+.+++++|+++|++ ++.+|.+|+||||+|+..|+.++ +++|++. |++++
T Consensus 80 ~~~~~v~~Ll~~g~~------------------~~~~~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~-ga~~~ 129 (172)
T 3v30_A 80 GYTDIVGLLLERDVD------------------INIYDWNGGTPLLYAVRGNHVKC-----------VEALLAR-GADLT 129 (172)
T ss_dssp TCHHHHHHHHTTTCC------------------TTCCCTTSCCHHHHHHHTTCHHH-----------HHHHHHT-TCCTT
T ss_pred CCHHHHHHHHHcCCC------------------CCCCCCCCCCHHHHHHHcCCHHH-----------HHHHHHc-CCCcc
Confidence 999999999999887 89999999999999999999999 9999996 99999
Q ss_pred ccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCC
Q 038344 148 AVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSA 184 (383)
Q Consensus 148 ~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~ 184 (383)
.+|.+|.||||+|+. .++.+++++|+++|++..
T Consensus 130 ~~~~~g~t~l~~A~~----~~~~~~~~~L~~~~~~~~ 162 (172)
T 3v30_A 130 TEADSGYTPMDLAVA----LGYRKVQQVIENHILKLF 162 (172)
T ss_dssp CCCTTSCCHHHHHHH----HTCHHHHHHHHHHHHHHS
T ss_pred ccCCCCCCHHHHHHH----hCcHHHHHHHHHHHHHHh
Confidence 999999999999999 889999999999998764
No 5
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=8.2e-28 Score=201.30 Aligned_cols=142 Identities=23% Similarity=0.328 Sum_probs=131.7
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHcC
Q 038344 2 TILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAMEG 68 (383)
Q Consensus 2 TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~g 68 (383)
||||.|+ ..|+.++++.|++.++++ +..|..|+||||+|+. |+ ++.+|.+|.||||+|+..|
T Consensus 7 ~~L~~A~---~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 7 NELASAA---ARGDLEQLTSLLQNNVNV-NAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp HHHHHHH---HHTCHHHHHHHTTSCCCT-TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred hHHHHHH---HcCCHHHHHHHHhCCCCc-cccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 7999995 499999999999999988 8889999999999998 77 6678899999999999999
Q ss_pred CHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhccccc-cc
Q 038344 69 HIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIE-VN 147 (383)
Q Consensus 69 ~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d-~~ 147 (383)
+.+++++|+++|++ +|.+|.+|+||||+|+..|+.++ +++|++. |++ ++
T Consensus 82 ~~~~v~~Ll~~g~~------------------~~~~~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~-g~~~~~ 131 (162)
T 1ihb_A 82 FLDTLQTLLEFQAD------------------VNIEDNEGNLPLHLAAKEGHLRV-----------VEFLVKH-TASNVG 131 (162)
T ss_dssp CHHHHHHHHHTTCC------------------TTCCCTTSCCHHHHHHHTTCHHH-----------HHHHHHH-SCCCTT
T ss_pred CHHHHHHHHHcCCC------------------CCCcCCCCCCHHHHHHHcCCHHH-----------HHHHHHc-cCCCCC
Confidence 99999999999887 89999999999999999999999 9999997 887 69
Q ss_pred ccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCC
Q 038344 148 AVNANGFTAWDILAQSKRDIKYWEIGELLRRARGN 182 (383)
Q Consensus 148 ~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~ 182 (383)
..|..|.||||+|+. .++.+++++|+++||+
T Consensus 132 ~~~~~g~t~l~~A~~----~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 132 HRNHKGDTACDLARL----YGRNEVVSLMQANGAG 162 (162)
T ss_dssp CCCTTSCCHHHHHHH----TTCHHHHHHHHHTC--
T ss_pred CcCCCCCcHHHHHHH----cCCHHHHHHHHHhCCC
Confidence 999999999999999 8899999999999985
No 6
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=1.6e-27 Score=200.73 Aligned_cols=146 Identities=18% Similarity=0.242 Sum_probs=136.9
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHc
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAME 67 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~ 67 (383)
.||||.|+ ..|+.++++.|++.++++ +..|..|+||||+|+..|+ ++..|.+|.||||+|+..
T Consensus 4 ~t~L~~A~---~~g~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 4 SLSVHQLA---AQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSK 79 (167)
T ss_dssp CCCHHHHH---HTTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cchHHHHH---HCCCHHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHc
Confidence 59999995 599999999999999887 8889999999999999998 567889999999999999
Q ss_pred CCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhccccccc
Q 038344 68 GHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVN 147 (383)
Q Consensus 68 g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~ 147 (383)
|+.+++++|+++|++ ++.+|.+|+||||+|+..|+.++ +++|++. |++++
T Consensus 80 ~~~~~v~~Ll~~g~~------------------~~~~~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~-g~~~~ 129 (167)
T 3v31_A 80 GYTDIVKMLLDCGVD------------------VNEYDWNGGTPLLYAVHGNHVKC-----------VKMLLES-GADPT 129 (167)
T ss_dssp TCHHHHHHHHHHTCC------------------TTCCCTTSCCHHHHHHHTTCHHH-----------HHHHHHT-TCCTT
T ss_pred CCHHHHHHHHHCCCC------------------CCcCCCCCCCHHHHHHHcCCHHH-----------HHHHHHc-CCCCC
Confidence 999999999999888 89999999999999999999999 9999996 99999
Q ss_pred ccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCC
Q 038344 148 AVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSA 184 (383)
Q Consensus 148 ~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~ 184 (383)
..|.+|.||+|+|+. .++.+++++|++++++..
T Consensus 130 ~~~~~g~t~l~~A~~----~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 130 IETDSGYNSMDLAVA----LGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp CCCTTSCCHHHHHHH----HTCHHHHHHHHHHHHHHC
T ss_pred CcCCCCCCHHHHHHH----cCcHHHHHHHHHHHHHHH
Confidence 999999999999999 889999999999987653
No 7
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=2.6e-27 Score=215.94 Aligned_cols=163 Identities=23% Similarity=0.251 Sum_probs=136.3
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcc--cccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHH
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPEL--ARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAA 65 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~--~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~ 65 (383)
+||||+|+. .|+.+++++|++.+++. .+.+|..|+||||+|+..|+ ++.+|.+|+||||+|+
T Consensus 10 ~t~L~~A~~---~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~ 86 (282)
T 1oy3_D 10 DTALHLAVI---HQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLAC 86 (282)
T ss_dssp CCHHHHHHH---TTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHT
T ss_pred CcHHHHHHH---cCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 589999954 89999999999888762 47888999999999999988 5677888999999999
Q ss_pred HcCCHHHHHHHHHcCCCCC-----------------------------------------------------ch------
Q 038344 66 MEGHIDVLEELVRAKPDAA-----------------------------------------------------SA------ 86 (383)
Q Consensus 66 ~~g~~~iv~~Ll~~~~~~~-----------------------------------------------------~~------ 86 (383)
..|+.+++++|++++++.. .+
T Consensus 87 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 166 (282)
T 1oy3_D 87 RVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAV 166 (282)
T ss_dssp TTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHH
T ss_pred HcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHH
Confidence 9999999999998775410 01
Q ss_pred ------HHHHHhhccCCcccccCCCCC-CCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHH
Q 038344 87 ------PLKSFLETREGSELLNANDDN-GMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDI 159 (383)
Q Consensus 87 ------~l~~l~~~~~~~~~~n~~d~~-g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~ 159 (383)
.+++|++ .+..++.++.. |+||||+|+..|+.++ +++|++. |++++.+|..|+||||+
T Consensus 167 ~~g~~~~v~~Ll~---~g~~~~~~~~~~g~tpL~~A~~~~~~~~-----------v~~Ll~~-gad~~~~d~~g~tpL~~ 231 (282)
T 1oy3_D 167 IHKDAEMVRLLRD---AGADLNKPEPTCGRTPLHLAVEAQAASV-----------LELLLKA-GADPTARMYGGRTPLGS 231 (282)
T ss_dssp HTTCHHHHHHHHH---HTCCTTCCCTTTCCCHHHHHHHTTCHHH-----------HHHHHHT-TCCTTCCCTTSCCHHHH
T ss_pred HcCCHHHHHHHHH---cCCCCCCCCCCCCcCHHHHHHHcCCHHH-----------HHHHHHc-CCCCcccccCCCCHHHH
Confidence 3445554 56678888854 9999999999999999 9999996 99999999999999999
Q ss_pred HHhccCCcchhhHHHHHHHhcCCCCC
Q 038344 160 LAQSKRDIKYWEIGELLRRARGNSAK 185 (383)
Q Consensus 160 A~~~~~~~~~~~i~~~L~~~ga~~~~ 185 (383)
|+. .++.+++++|+++|+++..
T Consensus 232 A~~----~~~~~~v~~Ll~~ga~~~~ 253 (282)
T 1oy3_D 232 ALL----RPNPILARLLRAHGAPEPE 253 (282)
T ss_dssp HHT----SSCHHHHHHHHHTTCCCCC
T ss_pred HHH----cCCcHHHHHHHHcCCCcCc
Confidence 999 7889999999999999854
No 8
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.95 E-value=1.1e-26 Score=205.40 Aligned_cols=162 Identities=20% Similarity=0.186 Sum_probs=140.6
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC---------------ccc-cCCCCCcHHHHH
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK---------------CSA-TDVDGRNALHLA 64 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~---------------~~~-~d~~G~tpLh~A 64 (383)
.||||.|+. .|+.++++.|++.+++..+..|.+|+||||+|+..|+ .+. .|..|.||||+|
T Consensus 3 ~t~L~~A~~---~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A 79 (228)
T 2dzn_A 3 NYPLHQACM---ENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIA 79 (228)
T ss_dssp CCHHHHHHH---TTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHH
T ss_pred ccHHHHHHH---hCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHH
Confidence 599999954 9999999999999999877789999999999999998 223 678999999999
Q ss_pred HHcCCHHHHHHHHHcC--CCCCch------------------HHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHH
Q 038344 65 AMEGHIDVLEELVRAK--PDAASA------------------PLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIW 124 (383)
Q Consensus 65 ~~~g~~~iv~~Ll~~~--~~~~~~------------------~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~ 124 (383)
+..|+.+++++|+++| ++.... .+++|++ .+.+++.+|.+|+||||+|+..|+.++
T Consensus 80 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~- 155 (228)
T 2dzn_A 80 CSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIE---NGASVRIKDKFNQIPLHRAASVGSLKL- 155 (228)
T ss_dssp HHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH---TTCCSCCCCTTSCCHHHHHHHTTCHHH-
T ss_pred HHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHH---cCCCccccCCCCCCHHHHHHHcCCHHH-
Confidence 9999999999999988 543321 4455555 577889999999999999999999999
Q ss_pred HHhhhchhhHHHHhhhccc-ccccccccCCCCHHHHHHhccCCcchhhHHHHHH-HhcCCCC
Q 038344 125 ITHITYKSRAIKFFTTSTA-IEVNAVNANGFTAWDILAQSKRDIKYWEIGELLR-RARGNSA 184 (383)
Q Consensus 125 ~~~l~~~~~~v~~Ll~~~g-~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~-~~ga~~~ 184 (383)
+++|++. | ++++.+|.+|+||||+|+. .++.+++++|+ ++|+++.
T Consensus 156 ----------v~~Ll~~-g~~~~~~~d~~g~t~L~~A~~----~~~~~~v~~Ll~~~ga~~~ 202 (228)
T 2dzn_A 156 ----------IELLCGL-GKSAVNWQDKQGWTPLFHALA----EGHGDAAVLLVEKYGAEYD 202 (228)
T ss_dssp ----------HHHHHTT-TCCCSCCCCTTSCCHHHHHHH----TTCHHHHHHHHHHHCCCSC
T ss_pred ----------HHHHHhc-CcccccCcCCCCCCHHHHHHH----cCCHHHHHHHHHhcCCCCC
Confidence 9999986 6 9999999999999999999 78889999999 8899874
No 9
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.95 E-value=2.9e-27 Score=215.30 Aligned_cols=162 Identities=24% Similarity=0.239 Sum_probs=125.8
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHhcCCcc-------cccCCCCCCcHHHHHHHcCC--------------ccccCCCCCcH
Q 038344 2 TILQLAVAAALLGHEDFVNEILCQKPEL-------ARKSDSRKSSALHIASQKGK--------------CSATDVDGRNA 60 (383)
Q Consensus 2 TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~-------~~~~d~~g~TpLh~Aa~~g~--------------~~~~d~~G~tp 60 (383)
|||+.|+ ..|+.++|++|++.+++. .+..|..|.||||.|+..++ ++.+|.+|+||
T Consensus 13 ~~L~~A~---~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~Tp 89 (269)
T 4b93_B 13 EKLLRAV---ADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSP 89 (269)
T ss_dssp HHHHHHH---HTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCCH
T ss_pred hHHHHHH---HcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCH
Confidence 6899985 599999999999988753 35567889999999998765 67789999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCch------------------HHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChh
Q 038344 61 LHLAAMEGHIDVLEELVRAKPDAASA------------------PLKSFLETREGSELLNANDDNGMTILHLAVADKQIE 122 (383)
Q Consensus 61 Lh~A~~~g~~~iv~~Ll~~~~~~~~~------------------~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~ 122 (383)
||+|+..|+.+++++|++.+++.... .+++|++ .+.++|.+|.+|+||||+|+..|+.+
T Consensus 90 Lh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~---~g~~~n~~d~~g~TpL~~A~~~g~~~ 166 (269)
T 4b93_B 90 LHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLD---SNAKPNKKDLSGNTPLIYACSGGHHE 166 (269)
T ss_dssp HHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH---TTCCSCCCCTTCCCHHHHHHHTTCGG
T ss_pred HHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHH---CCCCCCCCCCCCCCHHHHHHHCCCHH
Confidence 99999999999999999999876533 4566665 67789999999999999999999999
Q ss_pred HHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCCC
Q 038344 123 IWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSAK 185 (383)
Q Consensus 123 ~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 185 (383)
+ +++|++. |+|+|..|..|.||||+|+. .++.+++++|+++|++++.
T Consensus 167 ~-----------v~~Ll~~-gadvn~~~~~g~t~Lh~A~~----~g~~~~v~~Ll~~Gad~~~ 213 (269)
T 4b93_B 167 L-----------VALLLQH-GASINASNNKGNTALHEAVI----EKHVFVVELLLLHGASVQV 213 (269)
T ss_dssp G-----------HHHHHHT-TCCTTCBCTTSCBHHHHHHH----TTCHHHHHHHHHTTCCSCC
T ss_pred H-----------HHHHHHC-CCCCCccccCCCcHHHHHHH----cCCHHHHHHHHHCCCCCCC
Confidence 9 9999996 99999999999999999999 8899999999999999854
No 10
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=4.3e-27 Score=198.78 Aligned_cols=141 Identities=31% Similarity=0.449 Sum_probs=132.2
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHcC
Q 038344 2 TILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAMEG 68 (383)
Q Consensus 2 TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~g 68 (383)
||||.|+ ..|+.+++++|++.++++ +..|.+|+||||+|+..|+ ++..|.+|.||||+|+..|
T Consensus 16 ~~l~~A~---~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 91 (169)
T 2y1l_E 16 KKLLEAA---RAGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFG 91 (169)
T ss_dssp HHHHHHH---HHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred chHHHHH---HcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 6889985 599999999999999998 8889999999999999998 5678889999999999999
Q ss_pred CHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccc
Q 038344 69 HIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNA 148 (383)
Q Consensus 69 ~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~ 148 (383)
+.+++++|+++|++ ++.+|.+|+||||+|+..|+.++ +++|++. |++++.
T Consensus 92 ~~~~~~~Ll~~g~~------------------~~~~~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~-g~~~~~ 141 (169)
T 2y1l_E 92 HLEIVEVLLKNGAD------------------VNANDMEGHTPLHLAAMFGHLEI-----------VEVLLKN-GADVNA 141 (169)
T ss_dssp CHHHHHHHHHTTCC------------------TTCCCTTSCCHHHHHHHTTCHHH-----------HHHHHHT-TCCTTC
T ss_pred CHHHHHHHHHcCCC------------------CCCCCCCCCCHHHHHHHcCCHHH-----------HHHHHHc-CCCCCC
Confidence 99999999999888 88999999999999999999999 9999996 999999
Q ss_pred cccCCCCHHHHHHhccCCcchhhHHHHHHHhc
Q 038344 149 VNANGFTAWDILAQSKRDIKYWEIGELLRRAR 180 (383)
Q Consensus 149 ~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~g 180 (383)
+|..|.||+|+|+. .++.+++++|++.|
T Consensus 142 ~~~~g~t~l~~A~~----~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 142 QDKFGKTAFDISID----NGNEDLAEILQKLN 169 (169)
T ss_dssp CCTTSCCHHHHHHH----TTCHHHHHHHHTC-
T ss_pred cCCCCCCHHHHHHH----hCCHHHHHHHHHcC
Confidence 99999999999999 88999999999876
No 11
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=2.3e-27 Score=204.51 Aligned_cols=142 Identities=22% Similarity=0.249 Sum_probs=134.1
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHc
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAME 67 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~ 67 (383)
+||||+|+. .|+.+++++|++.++++ +..|..|+||||+|+..|+ ++.+|.+|.||||+|+..
T Consensus 36 ~t~L~~A~~---~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 111 (192)
T 2rfm_A 36 RTPLMVACM---LGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIF 111 (192)
T ss_dssp CCHHHHHHH---HTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCHHHHHHH---cCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence 599999955 89999999999999988 7889999999999999998 667889999999999999
Q ss_pred CCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhccccccc
Q 038344 68 GHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVN 147 (383)
Q Consensus 68 g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~ 147 (383)
|+.+++++|+++|++ ++.+|.+|+||||+|+..|+.++ +++|++. |++++
T Consensus 112 ~~~~~v~~Ll~~g~~------------------~~~~~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~-ga~~~ 161 (192)
T 2rfm_A 112 GYSEMSYFLLEHGAN------------------VNDRNLEGETPLIVASKYGRSEI-----------VKKLLEL-GADIS 161 (192)
T ss_dssp TCHHHHHHHHHTTCC------------------SSCCCTTCCCHHHHHHHHTCHHH-----------HHHHHHT-TCCTT
T ss_pred CCHHHHHHHHHCCCC------------------CCCCCCCCCCHHHHHHHcCCHHH-----------HHHHHHC-CCCCC
Confidence 999999999999888 89999999999999999999999 9999996 99999
Q ss_pred ccccCCCCHHHHHHhccCCcchhhHHHHHHHhc
Q 038344 148 AVNANGFTAWDILAQSKRDIKYWEIGELLRRAR 180 (383)
Q Consensus 148 ~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~g 180 (383)
.+|..|.||+|+|+. .++.+++++|+++|
T Consensus 162 ~~~~~g~t~l~~A~~----~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 162 ARDLTGLTAEASARI----FGRQEVIKIFTEVR 190 (192)
T ss_dssp CBCTTSCBHHHHHHH----TTCHHHHHHHHHHH
T ss_pred CcCCCCCCHHHHHHH----hCcHHHHHHHHhcc
Confidence 999999999999999 88999999999876
No 12
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.95 E-value=4.6e-27 Score=211.80 Aligned_cols=147 Identities=24% Similarity=0.249 Sum_probs=133.8
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC--------------ccccCCCCCcHHHHHHH
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK--------------CSATDVDGRNALHLAAM 66 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~--------------~~~~d~~G~tpLh~A~~ 66 (383)
+||||+|+ ..|+.++++.|++.|+++ +..|..|+||||+|+..|+ ++.+|.+|.||||+|+.
T Consensus 58 ~t~L~~A~---~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 133 (253)
T 1yyh_A 58 ETALHLAA---RYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR 133 (253)
T ss_dssp CCHHHHHH---HTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHH
T ss_pred CcHHHHHH---HcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHH
Confidence 58999995 489999999999999888 7888999999999999888 45677889999999999
Q ss_pred cCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccc
Q 038344 67 EGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEV 146 (383)
Q Consensus 67 ~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~ 146 (383)
.|+.+++++|+++|++ +|.+|.+|+||||+|+..|+.++ +++|++. |+++
T Consensus 134 ~~~~~~v~~Ll~~g~~------------------~~~~d~~g~t~L~~A~~~~~~~~-----------v~~Ll~~-ga~~ 183 (253)
T 1yyh_A 134 LAVEGMLEDLINSHAD------------------VNAVDDLGKSALHWAAAVNNVDA-----------AVVLLKN-GANK 183 (253)
T ss_dssp HTCSSHHHHHHHTTCC------------------TTCBCTTSCBHHHHHHHHTCHHH-----------HHHHHHT-TCCT
T ss_pred cChHHHHHHHHHcCCC------------------CCCcCCCCCCHHHHHHHcCCHHH-----------HHHHHHc-CCCC
Confidence 9999999999998887 89999999999999999999999 9999996 9999
Q ss_pred cccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCCC
Q 038344 147 NAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSAK 185 (383)
Q Consensus 147 ~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 185 (383)
+.+|..|.||||+|+. .++.+++++|+++|+++..
T Consensus 184 ~~~~~~g~tpL~~A~~----~~~~~~v~~Ll~~ga~~~~ 218 (253)
T 1yyh_A 184 DMQNNREETPLFLAAR----EGSYETAKVLLDHFANRDI 218 (253)
T ss_dssp TCCCTTSCCHHHHHHH----HTCHHHHHHHHHTTCCTTC
T ss_pred CCcCCCCCCHHHHHHH----CCCHHHHHHHHHcCCCccc
Confidence 9999999999999999 8889999999999998753
No 13
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.95 E-value=6.2e-27 Score=219.74 Aligned_cols=113 Identities=27% Similarity=0.376 Sum_probs=94.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCch----------------------HHHHHhhccCCcccccCCCCCCCc
Q 038344 54 DVDGRNALHLAAMEGHIDVLEELVR-AKPDAASA----------------------PLKSFLETREGSELLNANDDNGMT 110 (383)
Q Consensus 54 d~~G~tpLh~A~~~g~~~iv~~Ll~-~~~~~~~~----------------------~l~~l~~~~~~~~~~n~~d~~g~T 110 (383)
+..|.||||+|+++|+.+++++|++ .|++.... .+++|++ .++++|.+|.+|+|
T Consensus 165 ~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~---~gad~n~~d~~g~t 241 (337)
T 4g8k_A 165 RKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLD---HGADVNVRGERGKT 241 (337)
T ss_dssp TTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHH---TTCCTTCCCGGGCC
T ss_pred cCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHH---CCCCCCCcCCCCCC
Confidence 4567788888888888888888885 35554321 2344444 67889999999999
Q ss_pred HHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCC
Q 038344 111 ILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSA 184 (383)
Q Consensus 111 pLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~ 184 (383)
|||+|+..|+.++ ++.|++..|+++|.+|.+|+||||+|+. .++.+++++|+++||+++
T Consensus 242 ~L~~a~~~~~~~~-----------v~~Ll~~~~~~vn~~d~~G~TpL~~A~~----~g~~~iv~~Ll~~GAd~n 300 (337)
T 4g8k_A 242 PLILAVEKKHLGL-----------VQRLLEQEHIEINDTDSDGKTALLLAVE----LKLKKIAELLCKRGASTD 300 (337)
T ss_dssp HHHHHHHTTCHHH-----------HHHHHTSTTCCTTCBCTTSCBHHHHHHH----TTCHHHHHHHHTTSCSST
T ss_pred HHHHHHHhhhhHH-----------HHHHHHhcCCcccCcCCCCCCHHHHHHH----cCCHHHHHHHHHCCCCCC
Confidence 9999999999999 9999987799999999999999999999 889999999999999884
No 14
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.95 E-value=1.5e-26 Score=217.35 Aligned_cols=162 Identities=22% Similarity=0.220 Sum_probs=144.2
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHc
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAME 67 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~ 67 (383)
+||||+|+ ..|+.+++++|++.|+++ +..|.+|+||||+|+..|+ ++..|.+|.||||+|+..
T Consensus 59 ~t~L~~A~---~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 134 (351)
T 3utm_A 59 STPLHLAA---GYNRVRIVQLLLQHGADV-HAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASK 134 (351)
T ss_dssp CCHHHHHH---HTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred CCHHHHHH---HcCCHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 59999995 499999999999999998 8889999999999999999 567889999999999999
Q ss_pred CCHHHHHHHHHcCCCCCc------------------------------------------------------------h-
Q 038344 68 GHIDVLEELVRAKPDAAS------------------------------------------------------------A- 86 (383)
Q Consensus 68 g~~~iv~~Ll~~~~~~~~------------------------------------------------------------~- 86 (383)
|+.+++++|+++|++... +
T Consensus 135 ~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~ 214 (351)
T 3utm_A 135 NRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETA 214 (351)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCH
T ss_pred CCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCH
Confidence 999999999999887432 1
Q ss_pred --------------HHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccC
Q 038344 87 --------------PLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNAN 152 (383)
Q Consensus 87 --------------~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~ 152 (383)
.+++|+ ..+.++|.+|.+|+||||+|+..|+.++ +++|++. |+++|.+|..
T Consensus 215 L~~A~~~~~~~~~~~~~~Ll---~~g~~~~~~~~~g~t~L~~A~~~g~~~~-----------v~~Ll~~-ga~~n~~d~~ 279 (351)
T 3utm_A 215 LHCAVASLHPKRKQVAELLL---RKGANVNEKNKDFMTPLHVAAERAHNDV-----------MEVLHKH-GAKMNALDSL 279 (351)
T ss_dssp HHHHHHCCSTTHHHHHHHHH---HTTCCTTCCCTTCCCHHHHHHHTTCHHH-----------HHHHHHT-TCCTTCCCTT
T ss_pred HHHHHHHhCccHHHHHHHHH---HcCCCcCCcCCCCCCHHHHHHHcCCHHH-----------HHHHHHC-CCCCCCcCCC
Confidence 222333 3677889999999999999999999999 9999996 9999999999
Q ss_pred CCCHHHHHHhccCCcchhhHHHHHHHhcCCCCC
Q 038344 153 GFTAWDILAQSKRDIKYWEIGELLRRARGNSAK 185 (383)
Q Consensus 153 G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 185 (383)
|+||||+|+. .++.+++++|+++|+++..
T Consensus 280 g~t~L~~A~~----~~~~~~v~~Ll~~gad~~~ 308 (351)
T 3utm_A 280 GQTALHRAAL----AGHLQTCRLLLSYGSDPSI 308 (351)
T ss_dssp SCCHHHHHHH----HTCHHHHHHHHHTTCCTTC
T ss_pred CCCHHHHHHH----cCcHHHHHHHHHcCCCCCC
Confidence 9999999999 8899999999999999854
No 15
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.95 E-value=1.7e-26 Score=204.86 Aligned_cols=159 Identities=18% Similarity=0.179 Sum_probs=132.2
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhc-CCcccccCCCCCCcHHHHHHHcCC-------------c-----cccCCCCCcHH
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQ-KPELARKSDSRKSSALHIASQKGK-------------C-----SATDVDGRNAL 61 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~-~~~~~~~~d~~g~TpLh~Aa~~g~-------------~-----~~~d~~G~tpL 61 (383)
+||||+|+ ..|+.++++.|++. +.++ +..|.+|+||||+|+..|+ . +..|.+|.|||
T Consensus 4 ~t~L~~A~---~~g~~~~v~~Ll~~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L 79 (232)
T 2rfa_A 4 ESPLLLAA---KENDVQALSKLLKFEGCEV-HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTAL 79 (232)
T ss_dssp TCHHHHHH---HTTCHHHHHHHHTTTCSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHH
T ss_pred CCHHHHHH---HcCCHHHHHHHHHhcCCCc-ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHH
Confidence 59999995 49999999999998 6666 8889999999999999999 1 45677999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhc
Q 038344 62 HLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTS 141 (383)
Q Consensus 62 h~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~ 141 (383)
|+|+..|+.+++++|+++|++.....-. .......+..|.+|+||||+|+..|+.++ +++|++.
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-----~~~~~~~~~~~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~ 143 (232)
T 2rfa_A 80 HIAVINQNVNLVRALLARGASVSARATG-----SVFHYRPHNLIYYGEHPLSFAACVGSEEI-----------VRLLIEH 143 (232)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCCS-----GGGSCCTTCSCCCCSSHHHHHHHHTCHHH-----------HHHHHHT
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCcccCC-----cceeecccccccCCCCHHHHHHHcCCHHH-----------HHHHHHC
Confidence 9999999999999999999883211000 00001123345589999999999999999 9999996
Q ss_pred ccccccccccCCCCHHHHHHhccCCcchhhHH----HHHHHhcCCCC
Q 038344 142 TAIEVNAVNANGFTAWDILAQSKRDIKYWEIG----ELLRRARGNSA 184 (383)
Q Consensus 142 ~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~----~~L~~~ga~~~ 184 (383)
|+|++.+|.+|+||||+|+. .++.+++ ++|+++|++..
T Consensus 144 -ga~~~~~d~~g~t~L~~A~~----~~~~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 144 -GADIRAQDSLGNTVLHILIL----QPNKTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp -TCCTTCCCTTSCCHHHHHHT----CSCHHHHHHHHHHHHHTTCSCS
T ss_pred -CCCCCCCCCCCCCHHHHHHH----cCChHHHHHHHHHHHhcCCchh
Confidence 99999999999999999999 6777766 99999999763
No 16
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=5.2e-27 Score=200.11 Aligned_cols=148 Identities=23% Similarity=0.216 Sum_probs=137.9
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHc
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAME 67 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~ 67 (383)
+||||.|+. .|+.++++.|++.++...+..|..|+||||+|+..|+ ++.+|.+|.||||+|+..
T Consensus 6 ~~~l~~A~~---~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 6 MDDIFTQCR---EGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp -CCHHHHHH---HTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHH---cCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 478999955 9999999999999777668999999999999999998 677889999999999999
Q ss_pred CCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhccccccc
Q 038344 68 GHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVN 147 (383)
Q Consensus 68 g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~ 147 (383)
|+.+++++|+++|++ +|.+|.+|+||||+|+..|+.++ +++|++. |++++
T Consensus 83 ~~~~~v~~Ll~~g~~------------------~~~~d~~g~t~L~~A~~~~~~~~-----------v~~Ll~~-ga~~~ 132 (179)
T 3f6q_A 83 GHRDIVQKLLQYKAD------------------INAVNEHGNVPLHYACFWGQDQV-----------AEDLVAN-GALVS 132 (179)
T ss_dssp TCHHHHHHHHHTTCC------------------TTCCCTTSCCHHHHHHHTTCHHH-----------HHHHHHT-TCCSS
T ss_pred CCHHHHHHHHHcCCC------------------CCccCCCCCCHHHHHHHcCCHHH-----------HHHHHHC-CCCcc
Confidence 999999999999888 89999999999999999999999 9999996 99999
Q ss_pred ccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCCC
Q 038344 148 AVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSAK 185 (383)
Q Consensus 148 ~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 185 (383)
..|.+|.||+|+|+. .++.+++++|+++|++.+.
T Consensus 133 ~~~~~g~tpl~~A~~----~~~~~~~~~L~~~g~~~~~ 166 (179)
T 3f6q_A 133 ICNKYGEMPVDKAKA----PLRELLRERAEKMGQNLNR 166 (179)
T ss_dssp BCCTTSCCGGGGSCH----HHHHHHHHHHHHTTCCCSC
T ss_pred hhccCCCCcHHHHHH----HHHHHHHHHHHHhhcCccc
Confidence 999999999999998 8889999999999999853
No 17
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.94 E-value=2.4e-26 Score=210.99 Aligned_cols=160 Identities=18% Similarity=0.165 Sum_probs=140.7
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHc
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAME 67 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~ 67 (383)
+||||+|+ ..|+.++++.|++.++++ +..|.+|+||||+|+..|+ ++.+|.+|+||||+|+..
T Consensus 60 ~t~L~~Aa---~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~ 135 (285)
T 3d9h_A 60 WSPMHEAA---IHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVS 135 (285)
T ss_dssp CCHHHHHH---HTTCHHHHHHHHHTTCCS-CEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHH
T ss_pred CCHHHHHH---HcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 59999995 499999999999999987 8889999999999999998 577899999999999999
Q ss_pred CCHHHHHHHHHcCCCCCch-----------------HHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhc
Q 038344 68 GHIDVLEELVRAKPDAASA-----------------PLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITY 130 (383)
Q Consensus 68 g~~~iv~~Ll~~~~~~~~~-----------------~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~ 130 (383)
|+.+++++|+++|++.... .+++|++ .+.+++.+|.+|+||||+|+..|+.++
T Consensus 136 ~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~---~g~~~~~~d~~g~t~L~~A~~~~~~~~------- 205 (285)
T 3d9h_A 136 GSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIA---YGGNIDHKISHLGTPLYLACENQQRAC------- 205 (285)
T ss_dssp TCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHH---TTCCTTCCBTTTBCHHHHHHHTTCHHH-------
T ss_pred CHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH---CCCCCCCcCCCCCCHHHHHHHcCcHHH-------
Confidence 9999999999998875422 4455555 667788899999999999999999999
Q ss_pred hhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCC
Q 038344 131 KSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSA 184 (383)
Q Consensus 131 ~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~ 184 (383)
+++|++. |++++. |..|+||||+|+. .++.+++++|+++|+++.
T Consensus 206 ----v~~Ll~~-ga~~~~-~~~g~t~L~~A~~----~~~~~~v~~Ll~~gad~~ 249 (285)
T 3d9h_A 206 ----VKKLLES-GADVNQ-GKGQDSPLHAVVR----TASEELACLLMDFGADTQ 249 (285)
T ss_dssp ----HHHHHHT-TCCTTC-CBTTBCHHHHHHH----TTCHHHHHHHHHTTCCTT
T ss_pred ----HHHHHHC-CCCCCC-CCCCCCHHHHHHH----cCCHHHHHHHHHCCCCCC
Confidence 9999986 899885 8889999999998 788899999999998874
No 18
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.94 E-value=3.1e-27 Score=210.39 Aligned_cols=161 Identities=20% Similarity=0.283 Sum_probs=91.1
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCc---ccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHH
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPE---LARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLA 64 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~---~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A 64 (383)
+||||+|+ ..|+.++++.|++.++. ..+..|..|+||||+|+..|+ ++.+|.+|.||||+|
T Consensus 9 ~t~L~~A~---~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 85 (236)
T 1ikn_D 9 DSFLHLAI---IHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLA 85 (236)
T ss_dssp CCTTHHHH---HTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHH
T ss_pred CchhHHHH---HcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 46777763 36777777777666542 235666667777777777666 445566677777777
Q ss_pred HHcCCHHHHHHHHHcCCCCCc------------h------------HHHHHhhccCCcccccCCCC-CCCcHHHHHHHcC
Q 038344 65 AMEGHIDVLEELVRAKPDAAS------------A------------PLKSFLETREGSELLNANDD-NGMTILHLAVADK 119 (383)
Q Consensus 65 ~~~g~~~iv~~Ll~~~~~~~~------------~------------~l~~l~~~~~~~~~~n~~d~-~g~TpLh~A~~~~ 119 (383)
+..|+.+++++|++++++... + .+++|++ .+.+++.+|. .|+||||+|+..|
T Consensus 86 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~~g~tpL~~A~~~~ 162 (236)
T 1ikn_D 86 CEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVS---LGADVNAQEPCNGRTALHLAVDLQ 162 (236)
T ss_dssp HHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHH---HTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHH---cCCCCCCCCCCCCCCHHHHHHHcC
Confidence 777777777777776654110 0 1111221 2222555554 5556666666555
Q ss_pred ChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCC
Q 038344 120 QIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNS 183 (383)
Q Consensus 120 ~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~ 183 (383)
+.++ +++|++. |++++.+|..|.||||+|+. .++.+++++|+++|++.
T Consensus 163 ~~~~-----------v~~Ll~~-ga~~~~~~~~g~tpl~~A~~----~~~~~~~~~Ll~~ga~~ 210 (236)
T 1ikn_D 163 NPDL-----------VSLLLKC-GADVNRVTYQGYSPYQLTWG----RPSTRIQQQLGQLTLEN 210 (236)
T ss_dssp CHHH-----------HHHHHTT-TCCSCCCCTTCCCGGGGCTT----SSCHHHHHHHHTTSCGG
T ss_pred CHHH-----------HHHHHHc-CCCCCcccCCCCCHHHHHHc----cCchHHHHHHHHcchhh
Confidence 5555 5555554 55555555556666665555 45555556666555554
No 19
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.94 E-value=1.2e-26 Score=201.20 Aligned_cols=155 Identities=18% Similarity=0.200 Sum_probs=122.9
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHc
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAME 67 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~ 67 (383)
+||||.|+ ..|+.+.++.|++.++...+..|.+|+||||+|+..|+ ++.+|..|.||||+|+..
T Consensus 6 ~~~L~~A~---~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 82 (201)
T 3hra_A 6 VGALLEAA---NQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ 82 (201)
T ss_dssp TTHHHHHH---HTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred ccHHHHHH---HhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 48999994 49999999999999884458889999999999999998 577888999999999999
Q ss_pred CCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhccccccc
Q 038344 68 GHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVN 147 (383)
Q Consensus 68 g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~ 147 (383)
|+.+++++|++.+.. .++.+|.+|+||||+|+..|+.++ +++|++..+++++
T Consensus 83 ~~~~~~~~Ll~~~~~-----------------~~~~~~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~g~~~~~ 134 (201)
T 3hra_A 83 GRTEILAYMLKHATP-----------------DLNKHNRYGGNALIPAAEKGHIDN-----------VKLLLEDGREDID 134 (201)
T ss_dssp TCHHHHHHHHHHSCC-----------------CTTCCCTTSCCSHHHHHHTTCHHH-----------HHHHHHHCCCCTT
T ss_pred CCHHHHHHHHhccCc-----------------ccccccCCCCcHHHHHHHcCCHHH-----------HHHHHHcCCCCcC
Confidence 999999999954432 267777888888888888888888 8888876227788
Q ss_pred ccccCCCCHHHHHHhccC-CcchhhHHHHHHHhcCCCCCC
Q 038344 148 AVNANGFTAWDILAQSKR-DIKYWEIGELLRRARGNSAKD 186 (383)
Q Consensus 148 ~~n~~G~TpL~~A~~~~~-~~~~~~i~~~L~~~ga~~~~~ 186 (383)
.+|..|+||||+|+.... ..++.+++++|+++|+++...
T Consensus 135 ~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~ 174 (201)
T 3hra_A 135 FQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIK 174 (201)
T ss_dssp CCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCC
T ss_pred CCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCcc
Confidence 888888888888877321 122367888888888877543
No 20
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.94 E-value=2.6e-26 Score=203.41 Aligned_cols=161 Identities=20% Similarity=0.263 Sum_probs=136.4
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHcC
Q 038344 2 TILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAMEG 68 (383)
Q Consensus 2 TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~g 68 (383)
||||.|+ ..|+.+.++++++.++...+..|.+|+||||+|+..|+ ++.+|.+|+||||+|+..|
T Consensus 8 ~~l~~A~---~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 84 (231)
T 3aji_A 8 IMICNLA---YSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAG 84 (231)
T ss_dssp SHHHHHH---HHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHT
T ss_pred chHHHHH---HhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcC
Confidence 7889884 48999999999999888778889999999999999988 5677888999999999999
Q ss_pred CHHHHHHHHHcCCCCCch------------------HHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhc
Q 038344 69 HIDVLEELVRAKPDAASA------------------PLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITY 130 (383)
Q Consensus 69 ~~~iv~~Ll~~~~~~~~~------------------~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~ 130 (383)
+.+++++|+++|++.... .+++|++ .+..++.+|..|.||||+|+..|+.++
T Consensus 85 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~------- 154 (231)
T 3aji_A 85 XDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLE---GGANPDAKDHYDATAMHRAAAKGNLKM------- 154 (231)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH---TTCCTTCCCTTSCCHHHHHHHHTCHHH-------
T ss_pred HHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH---cCCCCCCcCCCCCcHHHHHHHcCCHHH-------
Confidence 999999999988875422 3444444 566788888899999999999999998
Q ss_pred hhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCC
Q 038344 131 KSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSA 184 (383)
Q Consensus 131 ~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~ 184 (383)
+++|++. |++++.+|..|+||||+|+. .++.+++++|+++|+++.
T Consensus 155 ----v~~Ll~~-g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~ga~~~ 199 (231)
T 3aji_A 155 ----VHILLFY-KASTNIQDTEGNTPLHLACD----EERVEEAKFLVTQGASIY 199 (231)
T ss_dssp ----HHHHHHT-TCCSCCCCTTSCCHHHHHHH----TTCHHHHHHHHHTTCCSC
T ss_pred ----HHHHHhc-CCCccccCCCCCCHHHHHHH----CCCHHHHHHHHHCCCCCC
Confidence 9999985 99999999999999999998 788899999999998874
No 21
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.94 E-value=5.3e-26 Score=202.27 Aligned_cols=161 Identities=21% Similarity=0.320 Sum_probs=137.8
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHc
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAME 67 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~ 67 (383)
+||||+|+. .|+.+++++|+++|.++ +..|.+|+||||+|+..|+ ++.+|.+|.||||+|+..
T Consensus 12 ~t~L~~A~~---~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 87 (237)
T 3b7b_A 12 RSPLHAAAE---AGHVDICHMLVQAGANI-DTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKK 87 (237)
T ss_dssp CCHHHHHHH---HTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHT
T ss_pred CCHHHHHHH---cCcHHHHHHHHHcCCCc-CccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Confidence 599999954 99999999999999998 7889999999999999998 567788999999999999
Q ss_pred CCHHHHHHHHHcCC-CCCc------h------------HHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhh
Q 038344 68 GHIDVLEELVRAKP-DAAS------A------------PLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHI 128 (383)
Q Consensus 68 g~~~iv~~Ll~~~~-~~~~------~------------~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l 128 (383)
|+.+++++|+++++ +... + .+++|++ .+..++.+|.+|+||||+|+..|+.++
T Consensus 88 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~----- 159 (237)
T 3b7b_A 88 GHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLS---KGSDINIRDNEENICLHWAAFSGCVDI----- 159 (237)
T ss_dssp TCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH---TTCCTTCCCTTSCCHHHHHHHHCCHHH-----
T ss_pred CCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHH---CCCCCCccCCCCCCHHHHHHHCCCHHH-----
Confidence 99999999999883 3221 1 4455555 566788888899999999999999888
Q ss_pred hchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCC
Q 038344 129 TYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSA 184 (383)
Q Consensus 129 ~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~ 184 (383)
+++|++. |++++..|..|.||||+|+. .++.+++++|+++|+++.
T Consensus 160 ------~~~Ll~~-g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~gad~~ 204 (237)
T 3b7b_A 160 ------AEILLAA-KCDLHAVNIHGDSPLHIAAR----ENRYDCVVLFLSRDSDVT 204 (237)
T ss_dssp ------HHHHHTT-TCCTTCCCTTCCCHHHHHHH----TTCHHHHHHHHTTTCCTT
T ss_pred ------HHHHHHc-CCCCCCcCCCCCCHHHHHHH----hCCHhHHHHHHHcCCCCC
Confidence 8988886 89999999999999999988 778889999999988874
No 22
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.94 E-value=6.3e-26 Score=202.03 Aligned_cols=161 Identities=23% Similarity=0.261 Sum_probs=137.9
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHh----cCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHH
Q 038344 1 MTILQLAVAAALLGHEDFVNEILC----QKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHL 63 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~----~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~ 63 (383)
+||||+|+. .|+.+++++|++ .+.++ +..|..|+||||+|+..|+ ++..|.+|.||||+
T Consensus 10 ~t~L~~A~~---~g~~~~v~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 85 (241)
T 1k1a_A 10 DTPLHIAVV---QGNLPAVHRLVNLFQQGGREL-DIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHL 85 (241)
T ss_dssp CCHHHHHHH---TTCHHHHHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CcHHHHHHH---cCCHHHHHHHHHHHHhcCCCC-CcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence 589999954 999999999997 45665 8889999999999999998 56778899999999
Q ss_pred HHHcCCHHHHHHHHHcCC----CCCch------------------HHHHHhhccCCcccccCCC-CCCCcHHHHHHHcCC
Q 038344 64 AAMEGHIDVLEELVRAKP----DAASA------------------PLKSFLETREGSELLNAND-DNGMTILHLAVADKQ 120 (383)
Q Consensus 64 A~~~g~~~iv~~Ll~~~~----~~~~~------------------~l~~l~~~~~~~~~~n~~d-~~g~TpLh~A~~~~~ 120 (383)
|+..|+.+++++|++.++ +.... .+++|++ .+.+++.+| ..|+||||+|+..|+
T Consensus 86 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~~g~t~L~~A~~~~~ 162 (241)
T 1k1a_A 86 ACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLE---RGADIDAVDIKSGRSPLIHAVENNS 162 (241)
T ss_dssp HHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH---TTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHH---cCCCcccccccCCCcHHHHHHHcCC
Confidence 999999999999999887 32211 4455555 567788888 789999999999999
Q ss_pred hhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCC
Q 038344 121 IEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSA 184 (383)
Q Consensus 121 ~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~ 184 (383)
.++ +++|++. |++++..|.+|+||||+|+. .++.+++++|+++|+++.
T Consensus 163 ~~~-----------v~~Ll~~-g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~ga~~~ 210 (241)
T 1k1a_A 163 LSM-----------VQLLLQH-GANVNAQMYSGSSALHSASG----RGLLPLVRTLVRSGADSS 210 (241)
T ss_dssp HHH-----------HHHHHHT-TCCTTCBCTTSCBHHHHHHH----HTCHHHHHHHHHTTCCTT
T ss_pred HHH-----------HHHHHHc-CCCCCCcCCCCCCHHHHHHH----cCCHHHHHHHHhcCCCCC
Confidence 999 9999996 99999999999999999999 788999999999999874
No 23
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=4.5e-26 Score=209.87 Aligned_cols=164 Identities=22% Similarity=0.272 Sum_probs=139.4
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHcC
Q 038344 2 TILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAMEG 68 (383)
Q Consensus 2 TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~g 68 (383)
||||.||. .|+.++++.|++.|+++ +..|.+|+||||+|+..|+ ++.+|.+|+||||+|+..|
T Consensus 42 t~l~~A~~---~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g 117 (299)
T 1s70_B 42 AVFLAACS---SGDTEEVLRLLERGADI-NYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCG 117 (299)
T ss_dssp HHHHHHHH---HTCHHHHHHHHHHCCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred cHHHHHHH---cCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Confidence 78999954 99999999999999998 8889999999999999999 6678899999999999999
Q ss_pred CHHHHHHHHHcCCCCCch------H------------HHHHhhcc------------------------CCcccccCCCC
Q 038344 69 HIDVLEELVRAKPDAASA------P------------LKSFLETR------------------------EGSELLNANDD 106 (383)
Q Consensus 69 ~~~iv~~Ll~~~~~~~~~------~------------l~~l~~~~------------------------~~~~~~n~~d~ 106 (383)
+.+++++|+++|++.... + ++.++... .........|.
T Consensus 118 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 197 (299)
T 1s70_B 118 YLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAK 197 (299)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTT
T ss_pred CHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcC
Confidence 999999999999876432 2 22222110 01112334678
Q ss_pred CCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCCC
Q 038344 107 NGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSAK 185 (383)
Q Consensus 107 ~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 185 (383)
.|.||||+|+..|+.++ +++|++. |+|+|.+|.+|.||||+|+. .++.+++++|+++|+++..
T Consensus 198 ~g~t~L~~A~~~g~~~~-----------v~~Ll~~-g~d~~~~d~~g~tpL~~A~~----~~~~~~v~~Ll~~gad~~~ 260 (299)
T 1s70_B 198 SGGTALHVAAAKGYTEV-----------LKLLIQA-RYDVNIKDYDGWTPLHAAAH----WGKEEACRILVENLCDMEA 260 (299)
T ss_dssp TCCCHHHHHHHHTCHHH-----------HHHHHTT-TCCTTCCCTTCCCHHHHHHH----TTCHHHHHHHHHTTCCTTC
T ss_pred CCCCHHHHHHHCCcHHH-----------HHHHHHc-CCCCCCcCCCCCcHHHHHHh----cCCHHHHHHHHHcCCCCCC
Confidence 89999999999999999 9999996 99999999999999999999 8899999999999998753
No 24
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.94 E-value=3.2e-26 Score=208.71 Aligned_cols=142 Identities=25% Similarity=0.303 Sum_probs=121.4
Q ss_pred cccCCCCCCcHHHHHHHcCC----------------ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCch-------
Q 038344 30 ARKSDSRKSSALHIASQKGK----------------CSATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASA------- 86 (383)
Q Consensus 30 ~~~~d~~g~TpLh~Aa~~g~----------------~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~------- 86 (383)
.+..|.+|+||||+|+..|+ ++.+|..|+||||+|+..|+.+++++|+++|++....
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tp 81 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTA 81 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCH
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 36789999999999999998 3567889999999999999999999999999886532
Q ss_pred -----------HHHHHhhccC--------------------------------------------CcccccCCCCCCCcH
Q 038344 87 -----------PLKSFLETRE--------------------------------------------GSELLNANDDNGMTI 111 (383)
Q Consensus 87 -----------~l~~l~~~~~--------------------------------------------~~~~~n~~d~~g~Tp 111 (383)
.+++|++... .+..++.+|..|+||
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~ 161 (282)
T 1oy3_D 82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTP 161 (282)
T ss_dssp HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCH
T ss_pred HHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCH
Confidence 4455554321 123478899999999
Q ss_pred HHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccC-CCCHHHHHHhccCCcchhhHHHHHHHhcCCCCCCC
Q 038344 112 LHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNAN-GFTAWDILAQSKRDIKYWEIGELLRRARGNSAKDM 187 (383)
Q Consensus 112 Lh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~-G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~~~l 187 (383)
||+|+..|+.++ +++|++. |++++..+.. |+||||+|+. .++.+++++|+++|+++...-
T Consensus 162 L~~A~~~g~~~~-----------v~~Ll~~-g~~~~~~~~~~g~tpL~~A~~----~~~~~~v~~Ll~~gad~~~~d 222 (282)
T 1oy3_D 162 LHVAVIHKDAEM-----------VRLLRDA-GADLNKPEPTCGRTPLHLAVE----AQAASVLELLLKAGADPTARM 222 (282)
T ss_dssp HHHHHHTTCHHH-----------HHHHHHH-TCCTTCCCTTTCCCHHHHHHH----TTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHHcCCHHH-----------HHHHHHc-CCCCCCCCCCCCcCHHHHHHH----cCCHHHHHHHHHcCCCCcccc
Confidence 999999999999 9999996 9999999865 9999999999 889999999999999986543
No 25
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=3.9e-26 Score=189.57 Aligned_cols=136 Identities=29% Similarity=0.381 Sum_probs=126.9
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHcC
Q 038344 2 TILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAMEG 68 (383)
Q Consensus 2 TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~g 68 (383)
||||.|+ ..|+.+++++|++.+++. + .|..|.||||+|+..|+ ++.+|.+|+||||+|+..|
T Consensus 4 ~~L~~A~---~~g~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 78 (153)
T 1awc_B 4 KKLLEAA---RAGQDDEVRILMANGAPF-T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEG 78 (153)
T ss_dssp HHHHHHH---HHTCHHHHHHHHHHTCCC-C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred HHHHHHH---HcCCHHHHHHHHHcCCCC-C-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 7899995 499999999999999977 3 58899999999999998 5678899999999999999
Q ss_pred CHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccc
Q 038344 69 HIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNA 148 (383)
Q Consensus 69 ~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~ 148 (383)
+.+++++|+++|++ +|.+|.+|+||||+|+..|+.++ +++|++. |++++.
T Consensus 79 ~~~~v~~Ll~~g~~------------------~~~~~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~-ga~~~~ 128 (153)
T 1awc_B 79 HANIVEVLLKHGAD------------------VNAKDMLKMTALHWATEHNHQEV-----------VELLIKY-GADVHT 128 (153)
T ss_dssp CHHHHHHHHTTTCC------------------TTCCCTTSCCHHHHHHHTTCHHH-----------HHHHHHT-TCCTTC
T ss_pred hHHHHHHHHHcCCC------------------CCCCCCCCCCHHHHHHHcCCHHH-----------HHHHHHc-CCCccc
Confidence 99999999999887 89999999999999999999999 9999996 999999
Q ss_pred cccCCCCHHHHHHhccCCcchhhHHHHH
Q 038344 149 VNANGFTAWDILAQSKRDIKYWEIGELL 176 (383)
Q Consensus 149 ~n~~G~TpL~~A~~~~~~~~~~~i~~~L 176 (383)
+|.+|.||+|+|+. .++.+++++|
T Consensus 129 ~~~~g~t~l~~A~~----~~~~~i~~~L 152 (153)
T 1awc_B 129 QSKFCKTAFDISID----NGNEDLAEIL 152 (153)
T ss_dssp CCTTSCCHHHHHHH----TTCHHHHHHH
T ss_pred cCCCCCCHHHHHHH----cCCHHHHHHh
Confidence 99999999999999 8889999887
No 26
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.94 E-value=2.7e-26 Score=203.56 Aligned_cols=152 Identities=21% Similarity=0.224 Sum_probs=131.3
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCccc----ccCCCCCCcHHHHHHHcCC-------------ccccC---------
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELA----RKSDSRKSSALHIASQKGK-------------CSATD--------- 54 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~----~~~d~~g~TpLh~Aa~~g~-------------~~~~d--------- 54 (383)
+||||+|+. .|+.+++++|++.++++. +..|.+|+||||+|+..|+ ++..+
T Consensus 38 ~t~L~~A~~---~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~ 114 (232)
T 2rfa_A 38 ETALHIAAL---YDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRP 114 (232)
T ss_dssp CCHHHHHHH---TTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCT
T ss_pred CCHHHHHHH---cCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecc
Confidence 599999954 999999999999998863 4567799999999999998 33333
Q ss_pred ----CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhc
Q 038344 55 ----VDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITY 130 (383)
Q Consensus 55 ----~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~ 130 (383)
.+|.||||+|+..|+.+++++|+++|++ +|.+|.+|+||||+|+..|+.+++..
T Consensus 115 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------------------~~~~d~~g~t~L~~A~~~~~~~~~~~---- 172 (232)
T 2rfa_A 115 HNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD------------------IRAQDSLGNTVLHILILQPNKTFACQ---- 172 (232)
T ss_dssp TCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC------------------TTCCCTTSCCHHHHHHTCSCHHHHHH----
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHHCCCC------------------CCCCCCCCCCHHHHHHHcCChHHHHH----
Confidence 3799999999999999999999999888 89999999999999999999998100
Q ss_pred hhhHHHHhhhcccccc------cccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCCC
Q 038344 131 KSRAIKFFTTSTAIEV------NAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSAK 185 (383)
Q Consensus 131 ~~~~v~~Ll~~~g~d~------~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 185 (383)
.+++|++. |++. +.+|.+|+||||+|+. .++.+++++|+++|+....
T Consensus 173 ---i~~~Ll~~-g~~~~~~~~~~~~~~~g~tpl~~A~~----~g~~~~v~~Ll~~g~~~~~ 225 (232)
T 2rfa_A 173 ---MYNLLLSY-DGGDHLKSLELVPNNQGLTPFKLAGV----EGNIVMFQHLMQKRKHIAA 225 (232)
T ss_dssp ---HHHHHHHT-TCSCSSCCGGGCCCTTSCCHHHHHHH----HTCHHHHHHHHHHHHHC--
T ss_pred ---HHHHHHhc-CCchhhhhhhccCCCCCCCHHHHHHH----cCCHHHHHHHHhcCccchh
Confidence 02899986 8887 6899999999999999 8899999999999987743
No 27
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=1.3e-26 Score=194.85 Aligned_cols=142 Identities=28% Similarity=0.312 Sum_probs=129.3
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHcC
Q 038344 2 TILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAMEG 68 (383)
Q Consensus 2 TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~g 68 (383)
||||.|+ ..|+.++++.|++.++...+..|..|+||||+|+..|+ ++.+|.+|+||||+|+..|
T Consensus 10 ~~l~~A~---~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 86 (165)
T 3twr_A 10 RQLLEAA---KAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYG 86 (165)
T ss_dssp HHHHHHH---HHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHH---HhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcC
Confidence 7899995 49999999999998776668889999999999999998 6778999999999999999
Q ss_pred CHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccc
Q 038344 69 HIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNA 148 (383)
Q Consensus 69 ~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~ 148 (383)
+.+++++|+++|++ +|.+|.+|+||||+|+..|+.++ +++|++. |++++.
T Consensus 87 ~~~~v~~Ll~~g~~------------------~~~~~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~-ga~~~~ 136 (165)
T 3twr_A 87 HYEVAELLVKHGAV------------------VNVADLWKFTPLHEAAAKGKYEI-----------CKLLLQH-GADPTK 136 (165)
T ss_dssp CHHHHHHHHHTTCC------------------TTCCCTTCCCHHHHHHHTTCHHH-----------HHHHHHT-TCCTTC
T ss_pred cHHHHHHHHhCCCC------------------CCCcCCCCCCHHHHHHHcCCHHH-----------HHHHHHc-CCCCcc
Confidence 99999999999888 89999999999999999999999 9999996 999999
Q ss_pred cccCCCCHHHHHHhccCCcchhhHHHHHHHhcC
Q 038344 149 VNANGFTAWDILAQSKRDIKYWEIGELLRRARG 181 (383)
Q Consensus 149 ~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga 181 (383)
+|.+|+||+|+|.. ++.+++++|+++||
T Consensus 137 ~~~~g~t~l~~a~~-----~~~~i~~~L~~~gA 164 (165)
T 3twr_A 137 KNRDGNTPLDLVKD-----GDTDIQDLLRGDAA 164 (165)
T ss_dssp CCTTSCCTGGGSCT-----TCHHHHHHHHTC--
T ss_pred cCCCCCChhHhHhc-----CChHHHHHHhhccc
Confidence 99999999999765 56699999999886
No 28
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=1.7e-25 Score=203.78 Aligned_cols=164 Identities=24% Similarity=0.318 Sum_probs=100.4
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHc
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAME 67 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~ 67 (383)
+||||+|+. .|+.+++++|++.++++ +..|.+|.||||+|+..|+ ++..|.+|.||||+|+..
T Consensus 40 ~t~L~~A~~---~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 115 (285)
T 1wdy_A 40 WTPLHNAVQ---MSREDIVELLLRHGADP-VLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVY 115 (285)
T ss_dssp CCHHHHHHH---TTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHT
T ss_pred CcHHHHHHH---cCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHh
Confidence 367777743 77777777777777766 5667777777777777776 345566666666666666
Q ss_pred CCHHHHHHHHHcCCCCCc----------------h------------HHHHHhhc-------------------------
Q 038344 68 GHIDVLEELVRAKPDAAS----------------A------------PLKSFLET------------------------- 94 (383)
Q Consensus 68 g~~~iv~~Ll~~~~~~~~----------------~------------~l~~l~~~------------------------- 94 (383)
|+.+++++|+++|++... + .+++|++.
T Consensus 116 ~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~ 195 (285)
T 1wdy_A 116 GKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDD 195 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCT
T ss_pred CCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcccc
Confidence 666666666666554321 1 22233321
Q ss_pred ----------cCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHhcc
Q 038344 95 ----------REGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSK 164 (383)
Q Consensus 95 ----------~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~ 164 (383)
...+.++|.+|.+|+||||+|+..|+.++ +++|+++.|++++.+|.+|+||||+|+.
T Consensus 196 ~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~~g~~~~~~~~~g~t~l~~A~~-- 262 (285)
T 1wdy_A 196 SDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGL-----------VQRLLEQEHIEINDTDSDGKTALLLAVE-- 262 (285)
T ss_dssp TTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHH-----------HHHHHHSSSCCTTCCCTTSCCHHHHHHH--
T ss_pred chHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHH-----------HHHHHhccCCCccccCCCCCcHHHHHHH--
Confidence 11334455555555555555555555555 6666664466666666666666666666
Q ss_pred CCcchhhHHHHHHHhcCCC
Q 038344 165 RDIKYWEIGELLRRARGNS 183 (383)
Q Consensus 165 ~~~~~~~i~~~L~~~ga~~ 183 (383)
.++.+++++|+++|+++
T Consensus 263 --~~~~~i~~~Ll~~Ga~~ 279 (285)
T 1wdy_A 263 --LKLKKIAELLCKRGAST 279 (285)
T ss_dssp --TTCHHHHHHHHHHSSCS
T ss_pred --cCcHHHHHHHHHcCCCC
Confidence 55666666666666665
No 29
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.94 E-value=4.2e-26 Score=202.10 Aligned_cols=160 Identities=23% Similarity=0.263 Sum_probs=143.6
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHc
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAME 67 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~ 67 (383)
+||||+|+. .|+.+++++|++.+.++ +..|..|+||||+|+..|+ ++.+|.+|.||||+|+..
T Consensus 41 ~t~L~~A~~---~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 116 (231)
T 3aji_A 41 RTALHWACS---AGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASK 116 (231)
T ss_dssp CCHHHHHHH---HTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCHHHHHHH---cCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 589999954 99999999999999988 7889999999999999998 567888999999999999
Q ss_pred CCHHHHHHHHHcCCCCCch------------------HHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhh
Q 038344 68 GHIDVLEELVRAKPDAASA------------------PLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHIT 129 (383)
Q Consensus 68 g~~~iv~~Ll~~~~~~~~~------------------~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~ 129 (383)
|+.+++++|+++|.+.... .+++|++ .+.++|.+|.+|+||||+|+..|+.++
T Consensus 117 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~------ 187 (231)
T 3aji_A 117 NRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLF---YKASTNIQDTEGNTPLHLACDEERVEE------ 187 (231)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH---TTCCSCCCCTTSCCHHHHHHHTTCHHH------
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHh---cCCCccccCCCCCCHHHHHHHCCCHHH------
Confidence 9999999999998875432 4555555 677899999999999999999999999
Q ss_pred chhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCC
Q 038344 130 YKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNS 183 (383)
Q Consensus 130 ~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~ 183 (383)
+++|++. |++++.+|.+|.||+|+|.. .++.+++++|.++|++.
T Consensus 188 -----v~~Ll~~-ga~~~~~~~~g~t~l~~A~~----~~~~~i~~lL~~~~a~i 231 (231)
T 3aji_A 188 -----AKFLVTQ-GASIYIENKEEKTPLQVAKG----GLGLILKRLAEGEEASM 231 (231)
T ss_dssp -----HHHHHHT-TCCSCCCCTTSCCHHHHSCH----HHHHHHHHHHHHHHHCC
T ss_pred -----HHHHHHC-CCCCCCCCCCCCCHHHHHHh----hHHHHHHHHHccccccC
Confidence 9999996 99999999999999999988 78899999999998763
No 30
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.94 E-value=5.8e-27 Score=213.32 Aligned_cols=144 Identities=24% Similarity=0.355 Sum_probs=110.5
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHc
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAME 67 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~ 67 (383)
+||||+|+ ..|+.+++++|++.++++ +..+.+|.||+|+|+..++ ++.+|.+|+||||+|++.
T Consensus 87 ~TpLh~A~---~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~ 162 (269)
T 4b93_B 87 SSPLHVAA---LHGRADLIPLLLKHGANA-GARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSG 162 (269)
T ss_dssp CCHHHHHH---HTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHT
T ss_pred CCHHHHHH---HcCcHHHHHHHHhcCCCc-CccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Confidence 47777774 377777777777777776 6667777777777777776 566777788888888888
Q ss_pred CCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhccccccc
Q 038344 68 GHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVN 147 (383)
Q Consensus 68 g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~ 147 (383)
|+.+++++|+++|++ +|.+|.+|+||||+|+..|+.++ +++|++. |+|+|
T Consensus 163 g~~~~v~~Ll~~gad------------------vn~~~~~g~t~Lh~A~~~g~~~~-----------v~~Ll~~-Gad~~ 212 (269)
T 4b93_B 163 GHHELVALLLQHGAS------------------INASNNKGNTALHEAVIEKHVFV-----------VELLLLH-GASVQ 212 (269)
T ss_dssp TCGGGHHHHHHTTCC------------------TTCBCTTSCBHHHHHHHTTCHHH-----------HHHHHHT-TCCSC
T ss_pred CCHHHHHHHHHCCCC------------------CCccccCCCcHHHHHHHcCCHHH-----------HHHHHHC-CCCCC
Confidence 888888888877776 89999999999999999999999 9999996 99999
Q ss_pred ccccCCCCHHHHHHhccCCcch-hhHHHHHHHhcCC
Q 038344 148 AVNANGFTAWDILAQSKRDIKY-WEIGELLRRARGN 182 (383)
Q Consensus 148 ~~n~~G~TpL~~A~~~~~~~~~-~~i~~~L~~~ga~ 182 (383)
.+|.+|+||||+|++ .+. .++++.|...++.
T Consensus 213 ~~d~~G~TpL~~A~~----~~~i~~lL~~l~~~~~~ 244 (269)
T 4b93_B 213 VLNKRQRTAVDCAEQ----NSKIMELLQVVPSCVAS 244 (269)
T ss_dssp CCCTTSCCSGGGSCT----TCHHHHHTTC-------
T ss_pred CcCCCCCCHHHHHHh----CCcHHHHHHHHHHhchh
Confidence 999999999999987 333 3444444444443
No 31
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=5.9e-26 Score=207.42 Aligned_cols=144 Identities=22% Similarity=0.272 Sum_probs=131.7
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcC-----C-------------ccccCCCCCcHHH
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKG-----K-------------CSATDVDGRNALH 62 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g-----~-------------~~~~d~~G~tpLh 62 (383)
+||||+|+ ..|+.++++.|++.|+...+..|..|+||||+|+..+ + .+..|.+|+||||
T Consensus 112 ~T~Lh~A~---~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh 188 (276)
T 4hbd_A 112 NTALHYSV---SHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALM 188 (276)
T ss_dssp CCHHHHHH---HTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHH
T ss_pred CCHHHHHH---HCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 59999995 4999999999999999445899999999999999543 2 4566788999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcc
Q 038344 63 LAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTST 142 (383)
Q Consensus 63 ~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~ 142 (383)
+|+..|+.+++++|+++|++ +|.+|.+|+||||+|+..|+.++ +++|++..
T Consensus 189 ~A~~~g~~~~v~~Ll~~gad------------------~n~~d~~G~TpLh~A~~~g~~~i-----------v~~Ll~~~ 239 (276)
T 4hbd_A 189 LAVSHGRVDVVKALLACEAD------------------VNVQDDDGSTALMCACEHGHKEI-----------AGLLLAVP 239 (276)
T ss_dssp HHHHTTCHHHHHHHHHTTCC------------------TTCCCTTSCCHHHHHHHHTCHHH-----------HHHHHTST
T ss_pred HHHHcCCHHHHHHHHhCCCC------------------CCCCCCCCCCHHHHHHHCCCHHH-----------HHHHHhcC
Confidence 99999999999999999888 89999999999999999999999 99999955
Q ss_pred cccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhc
Q 038344 143 AIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRAR 180 (383)
Q Consensus 143 g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~g 180 (383)
|+|++.+|.+|+||||+|+. .++.+++++|++++
T Consensus 240 gad~~~~d~~g~TpL~~A~~----~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 240 SCDISLTDRDGSTALMVALD----AGQSEIASMLYSRM 273 (276)
T ss_dssp TCCTTCCCTTSCCHHHHHHH----HTCHHHHHHHHHHC
T ss_pred CCCCcCcCCCCCCHHHHHHH----cCCHHHHHHHHhcc
Confidence 99999999999999999999 88999999999875
No 32
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=1.1e-25 Score=187.21 Aligned_cols=139 Identities=23% Similarity=0.323 Sum_probs=127.6
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHcC
Q 038344 2 TILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAMEG 68 (383)
Q Consensus 2 TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~g 68 (383)
||||.|+ ..|+.++++.|++..+...+..|..|+||||+ +..|+ ++.+|.+|.||||+|+..|
T Consensus 4 ~~L~~A~---~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 4 DRLSGAA---ARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHH---HHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred hHHHHHH---HhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Confidence 7999995 49999999999999433448889999999999 88888 6778899999999999999
Q ss_pred CHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccc
Q 038344 69 HIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNA 148 (383)
Q Consensus 69 ~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~ 148 (383)
+.+++++|+++|++ +|.+|.+|+||||+|+..|+.++ +++|++. ++++.
T Consensus 80 ~~~~v~~Ll~~g~~------------------~~~~~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~--~~~~~ 128 (156)
T 1bd8_A 80 FLDTLKVLVEHGAD------------------VNVPDGTGALPIHLAVQEGHTAV-----------VSFLAAE--SDLHR 128 (156)
T ss_dssp CHHHHHHHHHTTCC------------------SCCCCTTSCCHHHHHHHHTCHHH-----------HHHHHTT--SCTTC
T ss_pred cHHHHHHHHHcCCC------------------CCCcCCCCCcHHHHHHHhChHHH-----------HHHHHhc--cCCCC
Confidence 99999999999887 89999999999999999999999 9999985 89999
Q ss_pred cccCCCCHHHHHHhccCCcchhhHHHHHHHh
Q 038344 149 VNANGFTAWDILAQSKRDIKYWEIGELLRRA 179 (383)
Q Consensus 149 ~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ 179 (383)
.|.+|.||||+|+. .++.+++++|+++
T Consensus 129 ~~~~g~t~l~~A~~----~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 129 RDARGLTPLELALQ----RGAQDLVDILQGH 155 (156)
T ss_dssp CCTTSCCHHHHHHH----SCCHHHHHHHHTT
T ss_pred cCCCCCCHHHHHHH----cCcHHHHHHHHhh
Confidence 99999999999999 8899999999864
No 33
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.93 E-value=2.8e-26 Score=208.91 Aligned_cols=149 Identities=21% Similarity=0.217 Sum_probs=128.8
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcc------cc----cCCCCCCcHHHHHHHcCC-------------ccccCC--
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPEL------AR----KSDSRKSSALHIASQKGK-------------CSATDV-- 55 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~------~~----~~d~~g~TpLh~Aa~~g~-------------~~~~d~-- 55 (383)
+||||+|+.....|+.+++++|++.+++. .+ ..|..|+||||+|+..|+ ++.+|.
T Consensus 55 ~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~ 134 (273)
T 2pnn_A 55 KTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGD 134 (273)
T ss_dssp CCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSG
T ss_pred CCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccccc
Confidence 59999996522349999999999997652 12 256789999999999999 555665
Q ss_pred ------------CCCcHHHHHHHcCCHHHHHHHHH---cCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCC
Q 038344 56 ------------DGRNALHLAAMEGHIDVLEELVR---AKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQ 120 (383)
Q Consensus 56 ------------~G~tpLh~A~~~g~~~iv~~Ll~---~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~ 120 (383)
+|.||||+|+..|+.+++++|++ +|++ +|.+|.+|+||||+|+..|+
T Consensus 135 ~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad------------------~~~~d~~g~tpLh~A~~~~~ 196 (273)
T 2pnn_A 135 FFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD------------------ISARDSVGNTVLHALVEVAD 196 (273)
T ss_dssp GGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC------------------TTCCCTTSCCHHHHHHHHCC
T ss_pred ccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC------------------ceeeCCCCCcHHHHHHHccC
Confidence 79999999999999999999999 7777 89999999999999999887
Q ss_pred ---------hhHHHHhhhchhhHHHHhhhccccccc-------ccccCCCCHHHHHHhccCCcchhhHHHHHHHhcC-CC
Q 038344 121 ---------IEIWITHITYKSRAIKFFTTSTAIEVN-------AVNANGFTAWDILAQSKRDIKYWEIGELLRRARG-NS 183 (383)
Q Consensus 121 ---------~~~~~~~l~~~~~~v~~Ll~~~g~d~~-------~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga-~~ 183 (383)
.++ +++|++. |+++| .+|.+|+||||+|+. .++.+++++|+++|+ ++
T Consensus 197 ~~~~~~~~~~~~-----------v~~Ll~~-ga~~n~~~~~~~~~d~~g~TpL~~A~~----~g~~~iv~~Ll~~ga~dp 260 (273)
T 2pnn_A 197 NTVDNTKFVTSM-----------YNEILIL-GAKLHPTLKLEEITNRKGLTPLALAAS----SGKIGVLAYILQREIHEP 260 (273)
T ss_dssp SCHHHHHHHHHH-----------HHHHHHH-HHHHCTTCCGGGCCCTTSCCHHHHHHH----TTCHHHHHHHHHHHTC--
T ss_pred cchhHHHHHHHH-----------HHHHHHh-hhhcccccccccccCCCCCCHHHHHHH----hChHHHHHHHHHCCCCCc
Confidence 567 9999996 99997 489999999999999 889999999999999 55
No 34
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.93 E-value=1.8e-25 Score=201.32 Aligned_cols=145 Identities=19% Similarity=0.172 Sum_probs=132.7
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHc
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAME 67 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~ 67 (383)
+||||+|+. .|+.+++++|++.++...+..|.+|.||||+|+..|+ ++.+|.+|+||||+|+..
T Consensus 91 ~t~L~~A~~---~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 167 (253)
T 1yyh_A 91 RTPLHAAVS---ADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAV 167 (253)
T ss_dssp CCHHHHHHH---HTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHH
T ss_pred CCHHHHHHH---cCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 599999954 8999999999999985558899999999999999998 677899999999999999
Q ss_pred CCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhccccccc
Q 038344 68 GHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVN 147 (383)
Q Consensus 68 g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~ 147 (383)
|+.+++++|+++|++ +|.+|.+|+||||+|+..|+.++ +++|++. |++++
T Consensus 168 ~~~~~v~~Ll~~ga~------------------~~~~~~~g~tpL~~A~~~~~~~~-----------v~~Ll~~-ga~~~ 217 (253)
T 1yyh_A 168 NNVDAAVVLLKNGAN------------------KDMQNNREETPLFLAAREGSYET-----------AKVLLDH-FANRD 217 (253)
T ss_dssp TCHHHHHHHHHTTCC------------------TTCCCTTSCCHHHHHHHHTCHHH-----------HHHHHHT-TCCTT
T ss_pred CCHHHHHHHHHcCCC------------------CCCcCCCCCCHHHHHHHCCCHHH-----------HHHHHHc-CCCcc
Confidence 999999999999888 89999999999999999999999 9999996 99999
Q ss_pred ccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCC
Q 038344 148 AVNANGFTAWDILAQSKRDIKYWEIGELLRRARGN 182 (383)
Q Consensus 148 ~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~ 182 (383)
.+|..|+||+|+|+. .++.+++++|......
T Consensus 218 ~~d~~g~tpl~~A~~----~g~~~i~~~l~~~~~~ 248 (253)
T 1yyh_A 218 ITDHMDRLPRDIAQE----RMHHDIVRLLDLEHHH 248 (253)
T ss_dssp CCCTTCCCHHHHHHH----TTCHHHHHHHHC----
T ss_pred ccccCCCCHHHHHHH----cCCHHHHHHHHHHhhh
Confidence 999999999999999 8999999999876443
No 35
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=1.3e-26 Score=209.40 Aligned_cols=150 Identities=23% Similarity=0.238 Sum_probs=131.6
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcc----------cccCCCCCCcHHHHHHHcCC-------------ccccC---
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPEL----------ARKSDSRKSSALHIASQKGK-------------CSATD--- 54 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~----------~~~~d~~g~TpLh~Aa~~g~-------------~~~~d--- 54 (383)
+||||+|+.++..|+.++++.|++.+++. .+..|..|+||||+|+..|+ ++.+|
T Consensus 47 ~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~ 126 (260)
T 3jxi_A 47 KTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGR 126 (260)
T ss_dssp CCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEEC
T ss_pred CcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcccccc
Confidence 59999997544689999999999987542 24456689999999999999 55566
Q ss_pred -----------CCCCcHHHHHHHcCCHHHHHHHHH---cCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCC
Q 038344 55 -----------VDGRNALHLAAMEGHIDVLEELVR---AKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQ 120 (383)
Q Consensus 55 -----------~~G~tpLh~A~~~g~~~iv~~Ll~---~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~ 120 (383)
.+|+||||+|+..|+.+++++|++ +|++ +|.+|.+|+||||+|+..++
T Consensus 127 ~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~------------------~~~~d~~g~TpLh~A~~~~~ 188 (260)
T 3jxi_A 127 FFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD------------------LRRQDSRGNTVLHALVAIAD 188 (260)
T ss_dssp CCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC------------------TTCCCTTSCCHHHHHHHHCC
T ss_pred ccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC------------------CcccCCCCCcHHHHHHHhcc
Confidence 579999999999999999999999 7777 89999999999999998877
Q ss_pred ---------hhHHHHhhhchhhHHHHhhhcccccc-------cccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCC
Q 038344 121 ---------IEIWITHITYKSRAIKFFTTSTAIEV-------NAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSA 184 (383)
Q Consensus 121 ---------~~~~~~~l~~~~~~v~~Ll~~~g~d~-------~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~ 184 (383)
.++ +++|++. |+++ +..|.+|.||||+|+. .++.+++++|+++|+++.
T Consensus 189 ~~~~~~~~~~~~-----------v~~Ll~~-ga~~~~~~~~~~~~d~~g~tpL~~A~~----~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 189 NTRENTKFVTKM-----------YDLLLIK-CAKLFPDTNLEALLNNDGLSPLMMAAK----TGKIGIFQHIIRREIADA 252 (260)
T ss_dssp SSHHHHHHHHHH-----------HHHHHHH-HHHHCTTCCGGGCCCTTSCCHHHHHHH----TTCHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHH-----------HHHHHHh-CcccccccchhhcccCCCCCHHHHHHH----cCCHHHHHHHHHhCCCcc
Confidence 566 9999996 9999 7899999999999999 899999999999998763
No 36
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.93 E-value=6.8e-26 Score=201.82 Aligned_cols=158 Identities=19% Similarity=0.184 Sum_probs=136.4
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-----------------ccccCCCCCcHHHH
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-----------------CSATDVDGRNALHL 63 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-----------------~~~~d~~G~tpLh~ 63 (383)
+||||+|+. .|+.+++++|++.|+++ +..|..|+||||+|+..|+ ++..|.+|.||||+
T Consensus 47 ~t~L~~A~~---~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~ 122 (241)
T 1k1a_A 47 QTPLHLAVI---TTLPSVVRLLVTAGASP-MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHV 122 (241)
T ss_dssp CCHHHHHHH---TTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHH
T ss_pred CCHHHHHHH---cCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHH
Confidence 599999954 99999999999999988 7889999999999999998 34567889999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCch-------------------HHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHH
Q 038344 64 AAMEGHIDVLEELVRAKPDAASA-------------------PLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIW 124 (383)
Q Consensus 64 A~~~g~~~iv~~Ll~~~~~~~~~-------------------~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~ 124 (383)
|+..|+.+++++|+++|++.... .+++|++ .+.++|.+|.+|+||||+|+..|+.++
T Consensus 123 A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~- 198 (241)
T 1k1a_A 123 AVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQ---HGANVNAQMYSGSSALHSASGRGLLPL- 198 (241)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH---TTCCTTCBCTTSCBHHHHHHHHTCHHH-
T ss_pred HHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHH---cCCCCCCcCCCCCCHHHHHHHcCCHHH-
Confidence 99999999999999998875421 4555555 678899999999999999999999999
Q ss_pred HHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcC
Q 038344 125 ITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARG 181 (383)
Q Consensus 125 ~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga 181 (383)
+++|++. |+|++.+|.+|+||+|+|+. .++.++++.|.+.++
T Consensus 199 ----------v~~Ll~~-ga~~~~~~~~g~tpl~~A~~----~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 199 ----------VRTLVRS-GADSSLKNCHNDTPLMVARS----RRVIDILRGKATRPA 240 (241)
T ss_dssp ----------HHHHHHT-TCCTTCCCTTSCCTTTTCSS----HHHHHHHTC------
T ss_pred ----------HHHHHhc-CCCCCCcCCCCCCHHHHHHh----cCcHHHHhhhccCCC
Confidence 9999996 99999999999999999999 889999999988765
No 37
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.93 E-value=4.6e-26 Score=205.38 Aligned_cols=146 Identities=25% Similarity=0.231 Sum_probs=130.6
Q ss_pred CChHHHHHHHHHc---CCHHHHHHHHhcCCcccc----------cCCCCCCcHHHHHHHcCC-------------ccccC
Q 038344 1 MTILQLAVAAALL---GHEDFVNEILCQKPELAR----------KSDSRKSSALHIASQKGK-------------CSATD 54 (383)
Q Consensus 1 ~TpLh~A~~Aa~~---g~~~~v~~Ll~~~~~~~~----------~~d~~g~TpLh~Aa~~g~-------------~~~~d 54 (383)
+||||+|+. . |+.++++.|++.+++... ..|..|+||||+|+..|+ ++.+|
T Consensus 44 ~t~L~~A~~---~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~ 120 (256)
T 2etb_A 44 KTCLMKAVL---NLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRA 120 (256)
T ss_dssp BCHHHHHHH---TCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCHHHHHHH---ccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccc
Confidence 499999965 7 999999999999877621 234789999999999999 55566
Q ss_pred CC-------------CCcHHHHHHHcCCHHHHHHHHH---cCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHH-
Q 038344 55 VD-------------GRNALHLAAMEGHIDVLEELVR---AKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVA- 117 (383)
Q Consensus 55 ~~-------------G~tpLh~A~~~g~~~iv~~Ll~---~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~- 117 (383)
.. |.||||+|+..|+.+++++|++ +|++ +|.+|.+|+||||+|+.
T Consensus 121 ~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~------------------~n~~d~~g~TpLh~A~~~ 182 (256)
T 2etb_A 121 CGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS------------------LEATDSLGNTVLHALVMI 182 (256)
T ss_dssp CSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC------------------TTCCCTTSCCHHHHHHHH
T ss_pred ccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC------------------cCccCCCCCCHHHHHHHc
Confidence 65 9999999999999999999999 7877 89999999999999999
Q ss_pred -cCChh-------HHHHhhhchhhHHHHhhhcccccc-------cccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCC
Q 038344 118 -DKQIE-------IWITHITYKSRAIKFFTTSTAIEV-------NAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGN 182 (383)
Q Consensus 118 -~~~~~-------~~~~~l~~~~~~v~~Ll~~~g~d~-------~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~ 182 (383)
.++.+ + +++|++. |+++ +.+|.+|+||||+|+. .++.+++++|+++|++
T Consensus 183 ~~~~~~~~~~~~~i-----------v~~Ll~~-ga~~~~~~~~~~~~d~~g~tpL~~A~~----~g~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 183 ADNSPENSALVIHM-----------YDGLLQM-GARLCPTVQLEEISNHQGLTPLKLAAK----EGKIEIFRHILQREFS 246 (256)
T ss_dssp CCSCHHHHHHHHHH-----------HHHHHHH-HHHHSTTCCGGGCCCTTSCCHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred ccCCchhhHHHHHH-----------HHHHHHc-CCCcccccccccccCCCCCCHHHHHHH----hCCHHHHHHHHhCCCC
Confidence 77877 7 9999996 9999 9999999999999999 8899999999999987
Q ss_pred C
Q 038344 183 S 183 (383)
Q Consensus 183 ~ 183 (383)
.
T Consensus 247 ~ 247 (256)
T 2etb_A 247 G 247 (256)
T ss_dssp H
T ss_pred C
Confidence 6
No 38
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.93 E-value=6.3e-25 Score=190.25 Aligned_cols=142 Identities=26% Similarity=0.329 Sum_probs=133.1
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC--------------ccccCCCCCcHHHHHHH
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK--------------CSATDVDGRNALHLAAM 66 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~--------------~~~~d~~G~tpLh~A~~ 66 (383)
+||||+|+. .|+.+++++|++.|+++ +..|..|+||||+|+..|+ ++..|.+|.||||+|+.
T Consensus 40 ~t~L~~A~~---~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 115 (201)
T 3hra_A 40 NTPLNIAVH---NNDIEIAKALIDRGADI-NLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAE 115 (201)
T ss_dssp CCHHHHHHH---HTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHH
T ss_pred CCHHHHHHH---cCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHH
Confidence 599999954 99999999999999998 8889999999999999998 56778899999999999
Q ss_pred cCCHHHHHHHHHcC-CCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCC-----hhHHHHhhhchhhHHHHhhh
Q 038344 67 EGHIDVLEELVRAK-PDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQ-----IEIWITHITYKSRAIKFFTT 140 (383)
Q Consensus 67 ~g~~~iv~~Ll~~~-~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~-----~~~~~~~l~~~~~~v~~Ll~ 140 (383)
.|+.+++++|++++ .+ ++.+|.+|+||||+|+..++ .++ +++|++
T Consensus 116 ~~~~~~v~~Ll~~g~~~------------------~~~~~~~g~t~L~~A~~~~~~~~~~~~~-----------v~~Ll~ 166 (201)
T 3hra_A 116 KGHIDNVKLLLEDGRED------------------IDFQNDFGYTALIEAVGLREGNQLYQDI-----------VKLLME 166 (201)
T ss_dssp TTCHHHHHHHHHHCCCC------------------TTCCCTTSCCHHHHHHHSSCCSHHHHHH-----------HHHHHH
T ss_pred cCCHHHHHHHHHcCCCC------------------cCCCCCCCCCHHHHHHHhccchhhHHHH-----------HHHHHH
Confidence 99999999999998 55 89999999999999999998 888 999999
Q ss_pred cccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhc
Q 038344 141 STAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRAR 180 (383)
Q Consensus 141 ~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~g 180 (383)
. |++++.+|.+|.||||+|+. .++.+++++|+++|
T Consensus 167 ~-ga~~~~~~~~g~t~l~~A~~----~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 167 N-GADQSIKDNSGRTAMDYANQ----KGYTEISKILAQYN 201 (201)
T ss_dssp T-TCCTTCCCTTSCCHHHHHHH----HTCHHHHHHHHTCC
T ss_pred C-CCCCCccCCCCCCHHHHHHH----cCCHhHHHHHHhcC
Confidence 6 99999999999999999999 89999999999887
No 39
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=1.3e-25 Score=199.80 Aligned_cols=139 Identities=22% Similarity=0.298 Sum_probs=116.4
Q ss_pred ccCCCCCCcHHHHHHHcCC-----------------ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCch-------
Q 038344 31 RKSDSRKSSALHIASQKGK-----------------CSATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASA------- 86 (383)
Q Consensus 31 ~~~d~~g~TpLh~Aa~~g~-----------------~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~------- 86 (383)
+..|.+|+||||+|+..|+ ++.+|.+|+||||+|+..|+.+++++|+++|++....
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 81 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTP 81 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCH
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 3568999999999999998 3567888999999999999999999999999876532
Q ss_pred -----------HHHHHhhccCC---cccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhccccccccccc-
Q 038344 87 -----------PLKSFLETREG---SELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNA- 151 (383)
Q Consensus 87 -----------~l~~l~~~~~~---~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~- 151 (383)
.+++|++.... ...++..|..|+||||+|+..|+.++ +++|++. |++++.+|.
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~-g~~~~~~~~~ 149 (236)
T 1ikn_D 82 LHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGI-----------VELLVSL-GADVNAQEPC 149 (236)
T ss_dssp HHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHH-----------HHHHHHH-TCCTTCCCTT
T ss_pred HHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHH-----------HHHHHHc-CCCCCCCCCC
Confidence 45556654322 34478889999999999999999999 9999996 999999998
Q ss_pred CCCCHHHHHHhccCCcchhhHHHHHHHhcCCCCC
Q 038344 152 NGFTAWDILAQSKRDIKYWEIGELLRRARGNSAK 185 (383)
Q Consensus 152 ~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 185 (383)
.|.||||+|+. .++.+++++|+++|+++..
T Consensus 150 ~g~tpL~~A~~----~~~~~~v~~Ll~~ga~~~~ 179 (236)
T 1ikn_D 150 NGRTALHLAVD----LQNPDLVSLLLKCGADVNR 179 (236)
T ss_dssp TCCCHHHHHHH----TTCHHHHHHHHTTTCCSCC
T ss_pred CCCCHHHHHHH----cCCHHHHHHHHHcCCCCCc
Confidence 99999999999 8899999999999999854
No 40
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.93 E-value=4e-25 Score=210.64 Aligned_cols=160 Identities=22% Similarity=0.271 Sum_probs=119.6
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC----------------ccccCCCCCcHHHHH
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK----------------CSATDVDGRNALHLA 64 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~----------------~~~~d~~G~tpLh~A 64 (383)
+||||+|+. .|+.+++++|++.|+++ +..|..|.||||+|+..|+ ++..|.+|.||||+|
T Consensus 167 ~TpL~~A~~---~g~~~iv~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A 242 (373)
T 2fo1_E 167 NTPLMLAVL---ARRRRLVAYLMKAGADP-TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIV 242 (373)
T ss_dssp CCHHHHHHH---HTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHH
T ss_pred CCHHHHHHH---cChHHHHHHHHHCCCCC-cccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHH
Confidence 599999954 99999999999999998 7889999999999999998 455788999999999
Q ss_pred HHcC---CHHHHHHHHHcCCCCCc--------------h------------HHHHHhhccCCcccccCCCCCCCcHHHHH
Q 038344 65 AMEG---HIDVLEELVRAKPDAAS--------------A------------PLKSFLETREGSELLNANDDNGMTILHLA 115 (383)
Q Consensus 65 ~~~g---~~~iv~~Ll~~~~~~~~--------------~------------~l~~l~~~~~~~~~~n~~d~~g~TpLh~A 115 (383)
+..| +.+++++|+++|++... + .+++|++. .+.++|.+|.+|+||||+|
T Consensus 243 ~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~--~~~~~n~~d~~g~TpL~~A 320 (373)
T 2fo1_E 243 AHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGE--KGSNKDKQDEDGKTPIMLA 320 (373)
T ss_dssp HHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHH--SCCCTTCCCTTCCCHHHHH
T ss_pred HHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHh--cCCCccCcCCCCCCHHHHH
Confidence 9998 89999999999988542 1 33334431 2245666666666666666
Q ss_pred HHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCC
Q 038344 116 VADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGN 182 (383)
Q Consensus 116 ~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~ 182 (383)
+..|+.++ +++|++. |++++.+|..|+||||+|+. .++.+++++|+++|++
T Consensus 321 ~~~g~~~i-----------v~~Ll~~-gad~~~~d~~g~t~l~~A~~----~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 321 AQEGRIEV-----------VMYLIQQ-GASVEAVDATDHTARQLAQA----NNHHNIVDIFDRCRPE 371 (373)
T ss_dssp HHHTCHHH-----------HHHHHHT-TCCSSCCCSSSCCHHHHHHH----TTCHHHHHHHHTTC--
T ss_pred HHcCCHHH-----------HHHHHHc-CCCccCCCCCCCCHHHHHHH----cCCHHHHHHHHhcCcc
Confidence 66666666 6666664 66666666666666666666 5666666666666654
No 41
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.93 E-value=1e-25 Score=213.70 Aligned_cols=162 Identities=18% Similarity=0.191 Sum_probs=97.7
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-----------ccc------------------
Q 038344 2 TILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-----------CSA------------------ 52 (383)
Q Consensus 2 TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-----------~~~------------------ 52 (383)
||||+|+ ..|+.+++++|++.|+++ +..|..|+||||+|+..|+ .+.
T Consensus 22 t~L~~Aa---~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~ 97 (364)
T 3ljn_A 22 EKIHVAA---RKGQTDEVRRLIETGVSP-TIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKT 97 (364)
T ss_dssp HHHHHHH---HHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCH
T ss_pred CHHHHHH---HcCCHHHHHHHHHcCCCc-cccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCH
Confidence 7788874 478888888888887776 6777788888888888777 111
Q ss_pred ------------------------------------cCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCch--------
Q 038344 53 ------------------------------------TDVDGRNALHLAAMEG--HIDVLEELVRAKPDAASA-------- 86 (383)
Q Consensus 53 ------------------------------------~d~~G~tpLh~A~~~g--~~~iv~~Ll~~~~~~~~~-------- 86 (383)
.|.+|.||||+|+..| +.+++++|+++|++....
T Consensus 98 ~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L 177 (364)
T 3ljn_A 98 DLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPL 177 (364)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHH
T ss_pred HHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHH
Confidence 4445555555555555 555555555555543211
Q ss_pred ----------HHHHHhhccC--CcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCC
Q 038344 87 ----------PLKSFLETRE--GSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGF 154 (383)
Q Consensus 87 ----------~l~~l~~~~~--~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~ 154 (383)
.+++|++... .+..+|.+|.+|+||||+|+..|+.++ +++|++. |+|+|..|.+|.
T Consensus 178 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~-----------v~~Ll~~-gad~~~~d~~g~ 245 (364)
T 3ljn_A 178 MRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDV-----------AMRFVEM-GIDVNMEDNEHT 245 (364)
T ss_dssp HHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHH-----------HHHHHTT-TCCTTCCCTTSC
T ss_pred HHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHH-----------HHHHHHc-CCCCCCCCCCCC
Confidence 3333333211 111255555555555555555555555 6666664 666666666666
Q ss_pred CHHHHHHhccCCcchhhHHHHHHHhcCCC
Q 038344 155 TAWDILAQSKRDIKYWEIGELLRRARGNS 183 (383)
Q Consensus 155 TpL~~A~~~~~~~~~~~i~~~L~~~ga~~ 183 (383)
||||+|+. .++.+++++|+++|++.
T Consensus 246 tpL~~A~~----~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 246 VPLYLSVR----AAMVLLTKELLQKTDVF 270 (364)
T ss_dssp CHHHHHHH----TCCHHHHHHHHHHSCHH
T ss_pred CHHHHHHH----hChHHHHHHHHHcCCch
Confidence 66666666 56666666666666543
No 42
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=1e-24 Score=211.82 Aligned_cols=153 Identities=24% Similarity=0.333 Sum_probs=100.2
Q ss_pred cCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 038344 13 LGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAMEGHIDVLEELVRA 79 (383)
Q Consensus 13 ~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~ 79 (383)
.|+.+++++|+++++++ +..+.+|.||||+|+..|+ ++..|.+|.||||+|+..|+.+++++|+++
T Consensus 189 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 267 (437)
T 1n11_A 189 HNNLDIVKLLLPRGGSP-HSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSK 267 (437)
T ss_dssp TTCHHHHHHHGGGTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT
T ss_pred cCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhc
Confidence 44444444444444443 3334444444444444444 244555566666666666666666666665
Q ss_pred CCCCCch------------------HHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhc
Q 038344 80 KPDAASA------------------PLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTS 141 (383)
Q Consensus 80 ~~~~~~~------------------~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~ 141 (383)
+++.... .+++|++ .+..+|.+|..|+||||+|+..|+.++ +++|++.
T Consensus 268 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~g~t~L~~A~~~g~~~~-----------v~~Ll~~ 333 (437)
T 1n11_A 268 QANGNLGNKSGLTPLHLVAQEGHVPVADVLIK---HGVMVDATTRMGYTPLHVASHYGNIKL-----------VKFLLQH 333 (437)
T ss_dssp TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH---HTCCTTCCCSSCCCHHHHHHHSSCSHH-----------HHHHHHT
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh---CCccCCCCCCCCCCHHHHHHHcCcHHH-----------HHHHHhc
Confidence 5543321 3334443 455677777777778888777777777 8999886
Q ss_pred ccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCCC
Q 038344 142 TAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSAK 185 (383)
Q Consensus 142 ~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 185 (383)
|+|+|.+|..|+||||+|+. .++.+++++|+++|+++..
T Consensus 334 -gad~n~~~~~g~t~L~~A~~----~g~~~iv~~Ll~~ga~~~~ 372 (437)
T 1n11_A 334 -QADVNAKTKLGYSPLHQAAQ----QGHTDIVTLLLKNGASPNE 372 (437)
T ss_dssp -TCCTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHTTCCSCC
T ss_pred -CCCCCCCCCCCCCHHHHHHH----CChHHHHHHHHHCcCCCCC
Confidence 89999999999999999998 7888899999999998754
No 43
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.93 E-value=1.2e-24 Score=193.25 Aligned_cols=160 Identities=19% Similarity=0.200 Sum_probs=86.2
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------c-cccCCCCCcHHHHHHHc
Q 038344 2 TILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------C-SATDVDGRNALHLAAME 67 (383)
Q Consensus 2 TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~-~~~d~~G~tpLh~A~~~ 67 (383)
||||.|+ ..|+.+++++|++.+.++ +..|..|.||||+|+..|+ . ...+..|.||||+|+..
T Consensus 11 ~~l~~A~---~~g~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~ 86 (240)
T 3eu9_A 11 WDIVKAT---QYGIYERCRELVEAGYDV-RQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQ 86 (240)
T ss_dssp CCHHHHH---HTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHH
T ss_pred hHHHHHH---HcCChHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHc
Confidence 5566653 366666666666666655 5556666666666666665 1 12223355666666666
Q ss_pred CCHHHHHHHHHcCCCCCch------------------HHHHHhhccCCcccccCCCCCCCcHHHHHHHcCC-hhHHHHhh
Q 038344 68 GHIDVLEELVRAKPDAASA------------------PLKSFLETREGSELLNANDDNGMTILHLAVADKQ-IEIWITHI 128 (383)
Q Consensus 68 g~~~iv~~Ll~~~~~~~~~------------------~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~-~~~~~~~l 128 (383)
|+.+++++|++.|++.... .+++|++ .+..++.+|.+|.||||+|+..++ .++
T Consensus 87 ~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~---~~~~~~~~~~~g~t~l~~a~~~~~~~~~----- 158 (240)
T 3eu9_A 87 GHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIA---KGQDVDMMDQNGMTPLMWAAYRTHSVDP----- 158 (240)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH---TTCCTTCCCTTSCCHHHHHHHHCCSSTT-----
T ss_pred CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHh---cCCCccccCCCCCcHHHHHHHhCChHHH-----
Confidence 6666666666655543321 2333333 344455555555556655554443 444
Q ss_pred hchhhHHHHhhhccccccccccc-CCCCHHHHHHhccCCcchhhHHHHHHHhcCCCC
Q 038344 129 TYKSRAIKFFTTSTAIEVNAVNA-NGFTAWDILAQSKRDIKYWEIGELLRRARGNSA 184 (383)
Q Consensus 129 ~~~~~~v~~Ll~~~g~d~~~~n~-~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~ 184 (383)
+++|++. |++++..+. .|.||||+|+. .++.+++++|+++|+++.
T Consensus 159 ------~~~L~~~-~~~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~g~~~~ 204 (240)
T 3eu9_A 159 ------TRLLLTF-NVSVNLGDKYHKNTALHWAVL----AGNTTVISLLLEAGANVD 204 (240)
T ss_dssp ------HHHHHHT-TCCTTCCCTTTCCCHHHHHHH----HTCHHHHHHHHHHTCCTT
T ss_pred ------HHHHHhc-CCCcchhhccCCCcHHHHHHH----cCCHHHHHHHHHcCCCCC
Confidence 4555543 555555554 55555555555 445555555555555554
No 44
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=3.1e-24 Score=195.36 Aligned_cols=168 Identities=21% Similarity=0.229 Sum_probs=140.3
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHcC
Q 038344 2 TILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAMEG 68 (383)
Q Consensus 2 TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~g 68 (383)
||||.|+ ..|+.+++++|++.++++....+..|+||||+|+..|+ ++.+|.+|.||||+|+..|
T Consensus 7 ~~L~~A~---~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 83 (285)
T 1wdy_A 7 HLLIKAV---QNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAG 83 (285)
T ss_dssp HHHHHHH---HTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred hHHHHHH---HcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC
Confidence 7899995 49999999999999999854458899999999999998 5678899999999999999
Q ss_pred CHHHHHHHHHcCCCCCch------------------HHHHHhhccCCcccccCC----------CCCCCcHHHHHHHcCC
Q 038344 69 HIDVLEELVRAKPDAASA------------------PLKSFLETREGSELLNAN----------DDNGMTILHLAVADKQ 120 (383)
Q Consensus 69 ~~~iv~~Ll~~~~~~~~~------------------~l~~l~~~~~~~~~~n~~----------d~~g~TpLh~A~~~~~ 120 (383)
+.+++++|+++|++.... .+++|++ .+..++.+ |..|.||||+|+..|+
T Consensus 84 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~ 160 (285)
T 1wdy_A 84 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYK---RGANVNLRRKTKEDQERLRKGGATALMDAAEKGH 160 (285)
T ss_dssp CHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHH---TTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTC
T ss_pred CHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHH---hCCCcccccccHHHHHhhccCCCcHHHHHHHcCC
Confidence 999999999999876532 4555665 45556655 7889999999999999
Q ss_pred hhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCCCC
Q 038344 121 IEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSAKD 186 (383)
Q Consensus 121 ~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~~~ 186 (383)
.++ +++|++..|++++..|..|.||||+|+.........+++++|+++|+++...
T Consensus 161 ~~~-----------v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~ 215 (285)
T 1wdy_A 161 VEV-----------LKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVR 215 (285)
T ss_dssp HHH-----------HHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCC
T ss_pred HHH-----------HHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCc
Confidence 999 8888886688899889999999999888433333378888999998887543
No 45
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.92 E-value=9e-25 Score=192.98 Aligned_cols=155 Identities=18% Similarity=0.209 Sum_probs=130.8
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcC--CcccccCCCCCCcHHHHHHHcCC---------------ccccCCCCCcHHHH
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQK--PELARKSDSRKSSALHIASQKGK---------------CSATDVDGRNALHL 63 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~--~~~~~~~d~~g~TpLh~Aa~~g~---------------~~~~d~~G~tpLh~ 63 (383)
+||||+|+. .|+.+++++|++.+ +++....|..|+||||+|+..|+ ++..|.+|.||||+
T Consensus 37 ~t~L~~A~~---~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~ 113 (228)
T 2dzn_A 37 RIPLHWSVS---FQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHL 113 (228)
T ss_dssp CCHHHHHHH---TTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHH
T ss_pred CCHHHHHHH---cCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHH
Confidence 589999954 99999999999999 66644378999999999999988 35567889999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCch------------------HHHHHhhccCCc-ccccCCCCCCCcHHHHHHHcCChhHH
Q 038344 64 AAMEGHIDVLEELVRAKPDAASA------------------PLKSFLETREGS-ELLNANDDNGMTILHLAVADKQIEIW 124 (383)
Q Consensus 64 A~~~g~~~iv~~Ll~~~~~~~~~------------------~l~~l~~~~~~~-~~~n~~d~~g~TpLh~A~~~~~~~~~ 124 (383)
|+..|+.+++++|+++|.+.... .+++|++ .+ .++|.+|.+|+||||+|+..|+.++
T Consensus 114 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~d~~g~t~L~~A~~~~~~~~- 189 (228)
T 2dzn_A 114 AVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCG---LGKSAVNWQDKQGWTPLFHALAEGHGDA- 189 (228)
T ss_dssp HHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHT---TTCCCSCCCCTTSCCHHHHHHHTTCHHH-
T ss_pred HHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh---cCcccccCcCCCCCCHHHHHHHcCCHHH-
Confidence 99999999999999998876432 4455554 55 7799999999999999999999999
Q ss_pred HHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHh
Q 038344 125 ITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRA 179 (383)
Q Consensus 125 ~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ 179 (383)
+++|+++.|+|++.+|.+|.||+|+|.. .++.++|+++
T Consensus 190 ----------v~~Ll~~~ga~~~~~~~~g~t~l~~A~~-------~~~~~~l~~~ 227 (228)
T 2dzn_A 190 ----------AVLLVEKYGAEYDLVDNKGAKAEDVALN-------EQVKKFFLNN 227 (228)
T ss_dssp ----------HHHHHHHHCCCSCCBCTTSCBGGGGCSS-------TTHHHHHHTT
T ss_pred ----------HHHHHHhcCCCCCccCCCCCcHHHHHHH-------HHHHHHHHhc
Confidence 9999944599999999999999999976 3567777653
No 46
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.92 E-value=2.4e-24 Score=191.51 Aligned_cols=151 Identities=21% Similarity=0.213 Sum_probs=131.7
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC--------------ccccCCCCCcHHHHHHH
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK--------------CSATDVDGRNALHLAAM 66 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~--------------~~~~d~~G~tpLh~A~~ 66 (383)
+||||+|+. .|+.+++++|++.+.++ +..|..|.||||+|+..|+ ++..|..|.||||+|+.
T Consensus 45 ~t~L~~A~~---~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 120 (237)
T 3b7b_A 45 RTPLMEAAE---NNHLEAVKYLIKAGALV-DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATE 120 (237)
T ss_dssp CCHHHHHHH---TTCHHHHHHHHTTTCCC-CCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHH---hCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHH
Confidence 589999954 99999999999999987 7889999999999999998 45677889999999999
Q ss_pred cCCHHHHHHHHHcCCCCCch------------------HHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhh
Q 038344 67 EGHIDVLEELVRAKPDAASA------------------PLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHI 128 (383)
Q Consensus 67 ~g~~~iv~~Ll~~~~~~~~~------------------~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l 128 (383)
.|+.+++++|+++|++.... .+++|++ .+.+++.+|..|+||||+|+..|+.++
T Consensus 121 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~----- 192 (237)
T 3b7b_A 121 YKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLA---AKCDLHAVNIHGDSPLHIAARENRYDC----- 192 (237)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHT---TTCCTTCCCTTCCCHHHHHHHTTCHHH-----
T ss_pred cCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHH---cCCCCCCcCCCCCCHHHHHHHhCCHhH-----
Confidence 99999999999999876432 3445554 678899999999999999999999999
Q ss_pred hchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHH
Q 038344 129 TYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGE 174 (383)
Q Consensus 129 ~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~ 174 (383)
+++|++. |+|++.+|.+|+||||+|+. .++.+.+.
T Consensus 193 ------v~~Ll~~-gad~~~~d~~g~t~l~~A~~----~~~~~~~~ 227 (237)
T 3b7b_A 193 ------VVLFLSR-DSDVTLKNKEGETPLQCASL----NSQVWSAL 227 (237)
T ss_dssp ------HHHHHTT-TCCTTCCCTTSCCHHHHSCT----TCHHHHHH
T ss_pred ------HHHHHHc-CCCCCccCCCCCCHHHHHHH----HHHHHHHH
Confidence 9999996 99999999999999999998 55554333
No 47
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.92 E-value=2.5e-25 Score=204.17 Aligned_cols=159 Identities=16% Similarity=0.110 Sum_probs=131.1
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHc
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAME 67 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~ 67 (383)
+||||+|+. .|+.+++++|++.|+++ +.. +|+||||+|+..|+ ++.+|.+|+||||+|+..
T Consensus 32 ~t~L~~A~~---~g~~~~v~~Ll~~g~~~-~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~ 105 (285)
T 3kea_A 32 HSASYYAIA---DNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDS 105 (285)
T ss_dssp CCHHHHHHH---TTCHHHHHHHHHTTGGG-SCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCHHHHHHH---cCCHHHHHHHHhCCCCC-CCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHc
Confidence 589999954 99999999999999887 444 48999999999998 567888999999999999
Q ss_pred CCHHHHHHHHHcCCCCC-------ch------------HHHHHhhccCCcccccCCCC-CCCcHHHHHHHcCChhHHHHh
Q 038344 68 GHIDVLEELVRAKPDAA-------SA------------PLKSFLETREGSELLNANDD-NGMTILHLAVADKQIEIWITH 127 (383)
Q Consensus 68 g~~~iv~~Ll~~~~~~~-------~~------------~l~~l~~~~~~~~~~n~~d~-~g~TpLh~A~~~~~~~~~~~~ 127 (383)
|+.+++++|+++|++.. .+ .+++|++ .+... .|. .|+||||+|+..|+.++
T Consensus 106 g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~---~g~~~--~~~~~g~t~L~~A~~~g~~~~---- 176 (285)
T 3kea_A 106 GNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLS---EIPST--FDLAILLSCIHITIKNGHVDM---- 176 (285)
T ss_dssp TCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHT---TSCTT--CCCSTHHHHHHHHHHTTCHHH----
T ss_pred CCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHh---CCCcc--ccccCCccHHHHHHHcChHHH----
Confidence 99999999999987743 22 3344444 22222 333 78888888888888888
Q ss_pred hhchhhHHHHhhhcccccccccccCCCCH-HHHHHhccCCcchhhHHHHHHHhcCCCCCC
Q 038344 128 ITYKSRAIKFFTTSTAIEVNAVNANGFTA-WDILAQSKRDIKYWEIGELLRRARGNSAKD 186 (383)
Q Consensus 128 l~~~~~~v~~Ll~~~g~d~~~~n~~G~Tp-L~~A~~~~~~~~~~~i~~~L~~~ga~~~~~ 186 (383)
+++|++. |++++.+|..|+|| ||+|+. .++.+++++|+++|+++...
T Consensus 177 -------v~~Ll~~-gad~n~~~~~g~t~~L~~A~~----~~~~~~v~~Ll~~gad~~~~ 224 (285)
T 3kea_A 177 -------MILLLDY-MTSTNTNNSLLFIPDIKLAID----NKDIEMLQALFKYDINIYSA 224 (285)
T ss_dssp -------HHHHHHH-HHHTCTTCCCBCCTTHHHHHH----HTCHHHHHHHTTSCBCSTTT
T ss_pred -------HHHHHHc-CCCCCcccCCCCChHHHHHHH----cCCHHHHHHHHHcCCCCCCC
Confidence 9999996 99999999999997 999999 78899999999999998653
No 48
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.92 E-value=1.1e-24 Score=197.05 Aligned_cols=157 Identities=18% Similarity=0.226 Sum_probs=134.5
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC------------ccccCCCCCcHHHHHHHcC
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK------------CSATDVDGRNALHLAAMEG 68 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~------------~~~~d~~G~tpLh~A~~~g 68 (383)
+||||+|+. .|+.++++.|++.|+++ +..|.+|+||||+|+..|+ -...+.+|.||||+|+..|
T Consensus 37 ~t~L~~A~~---~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~ 112 (261)
T 2xai_A 37 VSPLHEACL---GGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRG 112 (261)
T ss_dssp CCHHHHHHH---HTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTT
T ss_pred CCHHHHHHH---cCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcC
Confidence 599999954 89999999999999988 8889999999999999998 1123566999999999999
Q ss_pred CHHHHHHHHHcCCCCCch------------------HHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhc
Q 038344 69 HIDVLEELVRAKPDAASA------------------PLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITY 130 (383)
Q Consensus 69 ~~~iv~~Ll~~~~~~~~~------------------~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~ 130 (383)
+.+++++|+++|++.... .+++|++ .+.++|. |.+|+||||+|+..|+.++
T Consensus 113 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~-~~~g~t~Lh~A~~~~~~~~------- 181 (261)
T 2xai_A 113 HVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLE---SGADVNQ-GKGQDSPLHAVARTASEEL------- 181 (261)
T ss_dssp CHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHH---HTCCTTC-CBTTBCHHHHHHHHTCHHH-------
T ss_pred cHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHH---cCCCCCC-CCCCCChHHHHHHcCCHHH-------
Confidence 999999999999886532 4555665 5666774 8999999999999999999
Q ss_pred hhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCC
Q 038344 131 KSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNS 183 (383)
Q Consensus 131 ~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~ 183 (383)
+++|++. |+|++.+|.+|+||+|+|+. . .+++++|+++++++
T Consensus 182 ----v~~Ll~~-gad~~~~d~~g~tpl~~A~~----~--~~~~~~ll~~~~~~ 223 (261)
T 2xai_A 182 ----ACLLMDF-GADTQAKNAEGKRPVELVPP----E--SPLAQLFLEREGPP 223 (261)
T ss_dssp ----HHHHHHT-TCCTTCCCTTSCCGGGGSCT----T--CTHHHHHHHC-CCC
T ss_pred ----HHHHHHc-CCCCCCcCCCCCChhhhccc----c--ccHHHHHHhccCCc
Confidence 9999996 99999999999999999986 2 35899999987765
No 49
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.92 E-value=8e-25 Score=197.19 Aligned_cols=149 Identities=19% Similarity=0.188 Sum_probs=127.3
Q ss_pred CChHHHHHHHHHcCCHH----HHHHHHhcCCccccc----CCCCCCcHHHHHHHc---CC-------------cc-----
Q 038344 1 MTILQLAVAAALLGHED----FVNEILCQKPELARK----SDSRKSSALHIASQK---GK-------------CS----- 51 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~----~v~~Ll~~~~~~~~~----~d~~g~TpLh~Aa~~---g~-------------~~----- 51 (383)
+||||.|+. .|+.+ ++++|++.+.++ +. .|.+|+||||+|+.. |+ .+
T Consensus 3 ~t~L~~A~~---~g~~~~v~~ll~~l~~~g~~i-~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 78 (256)
T 2etb_A 3 RDRLFSVVS---RGVPEELTGLLEYLRWNSKYL-TDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPL 78 (256)
T ss_dssp HHHHHHHHH---HTCGGGGTTHHHHHHHHTCCT-TSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCG
T ss_pred ccHHHHHHH---cCCHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhh
Confidence 489999954 89997 667777789988 55 799999999999999 87 11
Q ss_pred ------ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCC-------------CCcHH
Q 038344 52 ------ATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDN-------------GMTIL 112 (383)
Q Consensus 52 ------~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~-------------g~TpL 112 (383)
.+|.+|.||||+|+..|+.+++++|+++|++ +|.+|.. |+|||
T Consensus 79 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------------------~~~~~~~~~~~~~~~~~~~~g~tpL 140 (256)
T 2etb_A 79 VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD------------------VHLRACGRFFQKHQGTCFYFGELPL 140 (256)
T ss_dssp GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC------------------TTCCCCSGGGSCCSSSCCCSCSSHH
T ss_pred cccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC------------------CCcccccccccccccccccCCCCHH
Confidence 1346799999999999999999999999988 6777765 99999
Q ss_pred HHHHHcCChhHHHHhhhchhhHHHHhhhc--ccccccccccCCCCHHHHHHhccCCcchhh-------HHHHHHHhcCCC
Q 038344 113 HLAVADKQIEIWITHITYKSRAIKFFTTS--TAIEVNAVNANGFTAWDILAQSKRDIKYWE-------IGELLRRARGNS 183 (383)
Q Consensus 113 h~A~~~~~~~~~~~~l~~~~~~v~~Ll~~--~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~-------i~~~L~~~ga~~ 183 (383)
|+|+..|+.++ +++|++. .|+|+|.+|.+|+||||+|+... .++.+ ++++|+++|+++
T Consensus 141 ~~A~~~~~~~~-----------v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~--~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 141 SLAACTKQWDV-----------VTYLLENPHQPASLEATDSLGNTVLHALVMIA--DNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp HHHHHTTCHHH-----------HHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHC--CSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHH-----------HHHHHhccccCCCcCccCCCCCCHHHHHHHcc--cCCchhhHHHHHHHHHHHHcCCCc
Confidence 99999999999 9999993 39999999999999999999722 23445 999999999987
Q ss_pred C
Q 038344 184 A 184 (383)
Q Consensus 184 ~ 184 (383)
.
T Consensus 208 ~ 208 (256)
T 2etb_A 208 C 208 (256)
T ss_dssp S
T ss_pred c
Confidence 3
No 50
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=4e-24 Score=207.59 Aligned_cols=162 Identities=23% Similarity=0.359 Sum_probs=133.1
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHc
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAME 67 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~ 67 (383)
+||||+|+ ..|+.+++++|+++++++ +..|..|.||||+|+..|+ ++.+|.+|+||||+|+..
T Consensus 15 ~t~L~~Aa---~~g~~~~v~~Ll~~g~~~-~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 90 (437)
T 1n11_A 15 LTPLHVAS---FMGHLPIVKNLLQRGASP-NVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARI 90 (437)
T ss_dssp CCHHHHHH---HHTCHHHHHHHHHTTCCS-CCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHH
T ss_pred CCHHHHHH---HCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHC
Confidence 59999995 499999999999999988 7889999999999999998 567888999999999999
Q ss_pred CCHHHHHHHHHcCCCCCch------------------HHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhh
Q 038344 68 GHIDVLEELVRAKPDAASA------------------PLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHIT 129 (383)
Q Consensus 68 g~~~iv~~Ll~~~~~~~~~------------------~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~ 129 (383)
|+.+++++|+++|++.... .++.|++ .+...+..+..|.||||+|+..|+.++
T Consensus 91 g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~~~~~g~t~L~~A~~~g~~~~------ 161 (437)
T 1n11_A 91 GHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLE---KEASQACMTKKGFTPLHVAAKYGKVRV------ 161 (437)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH---TTCCSCCCCTTSCCHHHHHHHTTCHHH------
T ss_pred CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh---CCCCCcCCCCCCCCHHHHHHHcCCHHH------
Confidence 9999999999998875422 3444444 455667777888888888888888888
Q ss_pred chhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCCC
Q 038344 130 YKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSAK 185 (383)
Q Consensus 130 ~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 185 (383)
+++|++. |++++..|.+|.||||+|+. .++.+++++|+++|+++..
T Consensus 162 -----v~~Ll~~-g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~g~~~~~ 207 (437)
T 1n11_A 162 -----AELLLER-DAHPNAAGKNGLTPLHVAVH----HNNLDIVKLLLPRGGSPHS 207 (437)
T ss_dssp -----HHHHHHT-TCCTTCCCSSCCCHHHHHHH----TTCHHHHHHHGGGTCCSCC
T ss_pred -----HHHHHhC-CCCCCCCCCCCCCHHHHHHH----cCCHHHHHHHHhCCCCCCC
Confidence 8888875 88888888888888888887 6777888888888877643
No 51
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.92 E-value=2.1e-24 Score=197.99 Aligned_cols=156 Identities=19% Similarity=0.221 Sum_probs=133.0
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHc
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAME 67 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~ 67 (383)
+||||+|+. .|+.+++++|++.++++ +..|.+|+||||+|+..|+ ++ .+.+|.||||+|+..
T Consensus 93 ~t~L~~A~~---~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~ 167 (285)
T 3d9h_A 93 VSPLHEACL---GGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ-PESDLASPIHEAARR 167 (285)
T ss_dssp CCHHHHHHH---TTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS-CSCTTSCHHHHHHHH
T ss_pred CCHHHHHHH---CCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCC-CCCCCCCHHHHHHHc
Confidence 599999954 99999999999999998 8889999999999999998 22 355699999999999
Q ss_pred CCHHHHHHHHHcCCCCCch------------------HHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhh
Q 038344 68 GHIDVLEELVRAKPDAASA------------------PLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHIT 129 (383)
Q Consensus 68 g~~~iv~~Ll~~~~~~~~~------------------~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~ 129 (383)
|+.+++++|+++|++.... .+++|++ .+.++| .|..|+||||+|+..|+.++
T Consensus 168 g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~---~ga~~~-~~~~g~t~L~~A~~~~~~~~------ 237 (285)
T 3d9h_A 168 GHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLE---SGADVN-QGKGQDSPLHAVVRTASEEL------ 237 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHH---TTCCTT-CCBTTBCHHHHHHHTTCHHH------
T ss_pred CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH---CCCCCC-CCCCCCCHHHHHHHcCCHHH------
Confidence 9999999999998876532 4566665 566777 48999999999999999999
Q ss_pred chhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHh-cCCC
Q 038344 130 YKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRA-RGNS 183 (383)
Q Consensus 130 ~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~-ga~~ 183 (383)
+++|++. |+|++.+|.+|+||||+|+. +.+++++|+++ |++.
T Consensus 238 -----v~~Ll~~-gad~~~~d~~g~t~l~~A~~------~~~~~~~Ll~~~~a~l 280 (285)
T 3d9h_A 238 -----ACLLMDF-GADTQAKNAEGKRPVELVPP------ESPLAQLFLEREGASL 280 (285)
T ss_dssp -----HHHHHHT-TCCTTCCCTTSCCGGGGSCT------TSHHHHHHHHHC----
T ss_pred -----HHHHHHC-CCCCCCcCCCCCCHHHHhcC------ccHHHHHHHHhhccCC
Confidence 9999996 99999999999999999985 35799999998 6665
No 52
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.91 E-value=3.8e-24 Score=200.83 Aligned_cols=163 Identities=25% Similarity=0.238 Sum_probs=127.1
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHcC
Q 038344 2 TILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAMEG 68 (383)
Q Consensus 2 TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~g 68 (383)
|+||.| +..|+.+.++.++...+...+..|..|+||||+|+..|+ ++.+|.+|+||||+|+..|
T Consensus 26 ~~L~~A---~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g 102 (351)
T 3utm_A 26 DELLEA---ARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYG 102 (351)
T ss_dssp HHHHHH---HHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred hhHHHH---HHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCC
Confidence 688998 459999999999988554458899999999999999999 6778999999999999999
Q ss_pred CHHHHHHHHHcCCCCCch------------------HHHHHhhccCCcccccC---------------------------
Q 038344 69 HIDVLEELVRAKPDAASA------------------PLKSFLETREGSELLNA--------------------------- 103 (383)
Q Consensus 69 ~~~iv~~Ll~~~~~~~~~------------------~l~~l~~~~~~~~~~n~--------------------------- 103 (383)
+.+++++|+++|++.... .+++|++. +..++.
T Consensus 103 ~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~ 179 (351)
T 3utm_A 103 HYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSH---GADPTLVNCHGKSAVDMAPTPELRERLTYEFKG 179 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCccccCCCCcchHHHhhhhhHHHHHhhhcc
Confidence 999999999998874321 23333332 111211
Q ss_pred ---------------------------CCCCCCcHHHHHHHc---CChhHHHHhhhchhhHHHHhhhcccccccccccCC
Q 038344 104 ---------------------------NDDNGMTILHLAVAD---KQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANG 153 (383)
Q Consensus 104 ---------------------------~d~~g~TpLh~A~~~---~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G 153 (383)
.+..|+||||+|+.. ++.++ +++|++. |+++|.+|.+|
T Consensus 180 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~-----------~~~Ll~~-g~~~~~~~~~g 247 (351)
T 3utm_A 180 HSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQV-----------AELLLRK-GANVNEKNKDF 247 (351)
T ss_dssp HHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHH-----------HHHHHHT-TCCTTCCCTTC
T ss_pred cHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHH-----------HHHHHHc-CCCcCCcCCCC
Confidence 223444555555554 22344 8889886 99999999999
Q ss_pred CCHHHHHHhccCCcchhhHHHHHHHhcCCCCCC
Q 038344 154 FTAWDILAQSKRDIKYWEIGELLRRARGNSAKD 186 (383)
Q Consensus 154 ~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~~~ 186 (383)
.||||+|+. .++.+++++|+++|++++..
T Consensus 248 ~t~L~~A~~----~g~~~~v~~Ll~~ga~~n~~ 276 (351)
T 3utm_A 248 MTPLHVAAE----RAHNDVMEVLHKHGAKMNAL 276 (351)
T ss_dssp CCHHHHHHH----TTCHHHHHHHHHTTCCTTCC
T ss_pred CCHHHHHHH----cCCHHHHHHHHHCCCCCCCc
Confidence 999999999 88899999999999998643
No 53
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.91 E-value=3.6e-25 Score=197.77 Aligned_cols=146 Identities=23% Similarity=0.241 Sum_probs=107.0
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHc
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAME 67 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~ 67 (383)
+||||.|+. .|+.+.++.|+++|.++ +. +..|.||||.|+..|+ ++.+|.+|+||||+|+..
T Consensus 6 ~t~L~~a~~---~~~~~~~~~ll~~g~~~-~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 6 QVSLPPGKR---TNLRKTGSERIAHGMRV-KF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH
T ss_pred cccCchhhh---hhhHHHHHHHhccCCCc-cc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 599999954 89999999999999988 43 5788999999999998 677899999999999999
Q ss_pred CCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhccccccc
Q 038344 68 GHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVN 147 (383)
Q Consensus 68 g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~ 147 (383)
|+.+++++|+++|++ +|.+|.+|+||||+|+..|+.++ +++|++. |++++
T Consensus 81 g~~~~v~~Ll~~ga~------------------~~~~d~~g~tpL~~A~~~~~~~~-----------v~~Ll~~-ga~~~ 130 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVN------------------VNAADSDGWTPLHCAASCNNVQV-----------CKFLVES-GAAVF 130 (239)
T ss_dssp TCHHHHHHHHHHTCC------------------TTCCCTTCCCHHHHHHHTTCHHH-----------HHHHHHT-TCCTT
T ss_pred CCHHHHHHHHHcCCC------------------CCccCCCCCCHHHHHHHcCCHHH-----------HHHHHHc-CCCcc
Confidence 999999999999888 89999999999999999999999 9999996 99999
Q ss_pred ccccCCC-CHHHHH--HhccCCcchhhHHHHHHHhcCCCCC
Q 038344 148 AVNANGF-TAWDIL--AQSKRDIKYWEIGELLRRARGNSAK 185 (383)
Q Consensus 148 ~~n~~G~-TpL~~A--~~~~~~~~~~~i~~~L~~~ga~~~~ 185 (383)
..|..|. ||||+| +. .++.+++++|+++|++...
T Consensus 131 ~~~~~~~~t~l~~a~~~~----~g~~~~~~~Ll~~~a~~~~ 167 (239)
T 1ycs_B 131 AMTYSDMQTAADKCEEME----EGYTQCSQFLYGVQEKMGI 167 (239)
T ss_dssp CCCSSSCCCHHHHCCSSS----TTCCCHHHHHHHHHHHTTT
T ss_pred eecCCCCcchHHHHHHhh----hccHHHHHHHHHhhhcccc
Confidence 9998887 999998 44 6789999999999998753
No 54
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.91 E-value=1.4e-24 Score=191.12 Aligned_cols=153 Identities=22% Similarity=0.290 Sum_probs=131.4
Q ss_pred CCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 038344 14 GHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAMEGHIDVLEELVRAK 80 (383)
Q Consensus 14 g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~ 80 (383)
|+.+++++|+++++++.+..|.+|+||||+|+..|+ ++.+|.+|+||||+|+..|+.+++++|++++
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 81 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 81 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 778899999999999977779999999999999999 6678899999999999999999999999988
Q ss_pred C-CCCc------h------------HHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhc
Q 038344 81 P-DAAS------A------------PLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTS 141 (383)
Q Consensus 81 ~-~~~~------~------------~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~ 141 (383)
+ +... + .+++|++ .+..++.+|.+|+||||+|+..|+.++ +++|++.
T Consensus 82 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~ 147 (223)
T 2f8y_A 82 ATDLDARMHDGTTPLILAARLAVEGMLEDLIN---SHADVNAVDDLGKSALHWAAAVNNVDA-----------AVVLLKN 147 (223)
T ss_dssp TSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH---TTCCTTCBCTTSCBHHHHHHHTTCHHH-----------HHHHHHT
T ss_pred CCCcccCCCCCCcHHHHHHHhCcHHHHHHHHH---cCCCCcCcCCCCCcHHHHHHHcCCHHH-----------HHHHHHc
Confidence 7 3221 1 4455555 677788999999999999999999999 9999996
Q ss_pred ccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCCC
Q 038344 142 TAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSAK 185 (383)
Q Consensus 142 ~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 185 (383)
|++++..|..|.||||+|+. .++.+++++|+++|+++..
T Consensus 148 -g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~ga~~~~ 186 (223)
T 2f8y_A 148 -GANKDMQNNREETPLFLAAR----EGSYETAKVLLDHFANRDI 186 (223)
T ss_dssp -TCCTTCCCTTCCCHHHHHHH----HTCHHHHHHHHHTTCCTTC
T ss_pred -CCCCCCcCCCCcCHHHHHHH----cCCHHHHHHHHHcCCCCcc
Confidence 99999999999999999998 7888999999999998743
No 55
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.91 E-value=1e-24 Score=207.85 Aligned_cols=163 Identities=17% Similarity=0.223 Sum_probs=138.5
Q ss_pred CChHHHHHHHHHcCCHHHHHHHH--------hcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCc
Q 038344 1 MTILQLAVAAALLGHEDFVNEIL--------CQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRN 59 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll--------~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~t 59 (383)
+||||+| +..|+.++++.|+ +.|.++ +..|.+|+||||+|+..|+ ++.+|.+|.|
T Consensus 126 ~t~Lh~A---a~~g~~~~v~~Ll~~~~~~ll~~ga~v-n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t 201 (373)
T 2fo1_E 126 RTVLHWI---ASNSSAEKSEDLIVHEAKECIAAGADV-NAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERS 201 (373)
T ss_dssp CCHHHHH---HCTTCCSCCTTHHHHHHHHHHHTCCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCC
T ss_pred CCHHHHH---HHCCCHHHHHHHHHHHHHHHHhcCCCC-cCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCC
Confidence 5999999 4589988877776 778887 8889999999999999999 5778899999
Q ss_pred HHHHHHHcCCHHHHHHHHHcC---CCCCc------h---------------HHHHHhhccCCccccc--------CCCCC
Q 038344 60 ALHLAAMEGHIDVLEELVRAK---PDAAS------A---------------PLKSFLETREGSELLN--------ANDDN 107 (383)
Q Consensus 60 pLh~A~~~g~~~iv~~Ll~~~---~~~~~------~---------------~l~~l~~~~~~~~~~n--------~~d~~ 107 (383)
|||+|+..|+.+++++|++++ .+... + .+++|++ .+..++ .+|..
T Consensus 202 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~---~g~~~~~~~~~~~~~~d~~ 278 (373)
T 2fo1_E 202 ALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVE---KGAKVDYDGAARKDSEKYK 278 (373)
T ss_dssp HHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHH---HTCCSSCCSGGGTSSSSCC
T ss_pred HHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHH---CCCCcccccccccCccccc
Confidence 999999999999999999876 23221 1 3445555 344444 37789
Q ss_pred CCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCCC
Q 038344 108 GMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSAK 185 (383)
Q Consensus 108 g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 185 (383)
|+||||+|+..|+.++ +++|++..|+++|.+|.+|.||||+|+. .++.+++++|+++|++.+.
T Consensus 279 g~t~Lh~A~~~g~~~~-----------v~~Ll~~~~~~~n~~d~~g~TpL~~A~~----~g~~~iv~~Ll~~gad~~~ 341 (373)
T 2fo1_E 279 GRTALHYAAQVSNMPI-----------VKYLVGEKGSNKDKQDEDGKTPIMLAAQ----EGRIEVVMYLIQQGASVEA 341 (373)
T ss_dssp CCCTHHHHHSSCCHHH-----------HHHHHHHSCCCTTCCCTTCCCHHHHHHH----HTCHHHHHHHHHTTCCSSC
T ss_pred CCCHHHHHHHhCCHHH-----------HHHHHHhcCCCccCcCCCCCCHHHHHHH----cCCHHHHHHHHHcCCCccC
Confidence 9999999999999999 9999987569999999999999999999 8899999999999999753
No 56
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.91 E-value=1.6e-24 Score=202.86 Aligned_cols=141 Identities=21% Similarity=0.206 Sum_probs=121.0
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-----------------ccccCCCCCcHHHH
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-----------------CSATDVDGRNALHL 63 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-----------------~~~~d~~G~tpLh~ 63 (383)
+||||+|+ ..|+.+++++|+++|+++ +.+|.+|+||||+|+..|+ ++.+|.+|+||||+
T Consensus 132 ~TpLh~Aa---~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~ 207 (327)
T 1sw6_A 132 NTPLHWLT---SIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHH 207 (327)
T ss_dssp CCHHHHHH---HTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHH
T ss_pred CcHHHHHH---HcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHH
Confidence 59999995 499999999999999998 8899999999999999764 66789999999999
Q ss_pred HHH----cCCHHHHHHHHHc--------------------CCCCCch------H------HHHHhhccCCcccccCCCCC
Q 038344 64 AAM----EGHIDVLEELVRA--------------------KPDAASA------P------LKSFLETREGSELLNANDDN 107 (383)
Q Consensus 64 A~~----~g~~~iv~~Ll~~--------------------~~~~~~~------~------l~~l~~~~~~~~~~n~~d~~ 107 (383)
|++ .|+.+++++|++. +.+.... + +++|++. .+|.+|.+
T Consensus 208 A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~-----~~n~~d~~ 282 (327)
T 1sw6_A 208 IIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIAN-----MLNAQDSN 282 (327)
T ss_dssp HHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHH-----TTTCCCTT
T ss_pred HHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHh-----CCCCCCCC
Confidence 999 8999999999987 3332221 2 3444442 48999999
Q ss_pred CCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHh
Q 038344 108 GMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQ 162 (383)
Q Consensus 108 g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~ 162 (383)
|+||||+|+..|+.++ +++|++. |+|++.+|.+|+||||+|+.
T Consensus 283 G~TpLh~A~~~g~~~~-----------v~~Ll~~-Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 283 GDTCLNIAARLGNISI-----------VDALLDY-GADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp SCCHHHHHHHHCCHHH-----------HHHHHHT-TCCTTCCCTTSCCGGGGTCC
T ss_pred CCCHHHHHHHcCCHHH-----------HHHHHHc-CCCCcccCCCCCCHHHHHHh
Confidence 9999999999999999 9999996 99999999999999999986
No 57
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.91 E-value=1.6e-24 Score=198.89 Aligned_cols=135 Identities=19% Similarity=0.147 Sum_probs=109.8
Q ss_pred cCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-----------ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 038344 13 LGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-----------CSATDVDGRNALHLAAMEGHIDVLEELVRAKP 81 (383)
Q Consensus 13 ~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-----------~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~ 81 (383)
..+.+.+..++..+ ++ +.+|.+|+||||+|+..|+ .+....+|+||||+|+..|+.+++++|+++|+
T Consensus 9 ~~~~~~v~~lL~~~-~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga 86 (285)
T 3kea_A 9 TWKSKQLKSFLSSK-DT-FKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTKIVKILLFSGL 86 (285)
T ss_dssp GCCHHHHHHHHHST-TT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCTTCCHHHHHTTSSSCHHHHHHHHTTC
T ss_pred hcCHHHHHHHHHhC-CC-CccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 45555555555554 34 7889999999999999999 23333469999999999999999999999998
Q ss_pred CCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCC-CCHHHHH
Q 038344 82 DAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANG-FTAWDIL 160 (383)
Q Consensus 82 ~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G-~TpL~~A 160 (383)
+ +|.+|..|+||||+|+..|+.++ +++|++. |++++..|..| .||||+|
T Consensus 87 ~------------------~~~~d~~g~t~L~~A~~~g~~~~-----------v~~Ll~~-ga~~~~~~~~g~~t~L~~A 136 (285)
T 3kea_A 87 D------------------DSQFDDKGNTALYYAVDSGNMQT-----------VKLFVKK-NWRLMFYGKTGWKTSFYHA 136 (285)
T ss_dssp C------------------TTCCCTTSCCHHHHHHHTTCHHH-----------HHHHHHH-CGGGGGCSSSGGGSHHHHH
T ss_pred C------------------CCCcCCCCCcHHHHHHHcCCHHH-----------HHHHHhc-CCCCCccCCCCCCCHHHHH
Confidence 8 77788888888888888888888 8888886 88888888888 7888888
Q ss_pred HhccCCcchhhHHHHHHHhcCCC
Q 038344 161 AQSKRDIKYWEIGELLRRARGNS 183 (383)
Q Consensus 161 ~~~~~~~~~~~i~~~L~~~ga~~ 183 (383)
+. .++.+++++|+++|++.
T Consensus 137 ~~----~~~~~~v~~Ll~~g~~~ 155 (285)
T 3kea_A 137 VM----LNDVSIVSYFLSEIPST 155 (285)
T ss_dssp HH----TTCHHHHHHHHTTSCTT
T ss_pred HH----cCCHHHHHHHHhCCCcc
Confidence 88 67778888888888776
No 58
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=1.6e-24 Score=176.22 Aligned_cols=123 Identities=20% Similarity=0.234 Sum_probs=109.1
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGKCSATDVDGRNALHLAAMEGHIDVLEELVRAK 80 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~ 80 (383)
+||||+|+. .|+.+++++|+++++++ +.+|.+|+||||+|+. |+.+++++|+++|
T Consensus 13 ~t~L~~A~~---~~~~~~v~~Ll~~g~~~---------------------~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g 67 (136)
T 1d9s_A 13 DAGLATAAA---RGQVETVRQLLEAGADP---------------------NALNRFGRRPIQVMMM-GSAQVAELLLLHG 67 (136)
T ss_dssp SCHHHHHHH---TTCHHHHHHHHHTTCCT---------------------TCCCTTCCTTTTTSTT-SCHHHHHHHHHHT
T ss_pred ccHHHHHHH---cCCHHHHHHHHHcCCCc---------------------CCcCCCCCCHHHHHHc-CCHHHHHHHHHCC
Confidence 477777743 77777777777777665 3457788999999999 9999999999999
Q ss_pred CCCCchHHHHHhhccCCcccccCCCCC-CCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHH
Q 038344 81 PDAASAPLKSFLETREGSELLNANDDN-GMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDI 159 (383)
Q Consensus 81 ~~~~~~~l~~l~~~~~~~~~~n~~d~~-g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~ 159 (383)
++ +|.+|.. |+||||+|+..|+.++ +++|++. |++++.+|.+|.||||+
T Consensus 68 ~~------------------~~~~~~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~-ga~~~~~d~~g~tpl~~ 117 (136)
T 1d9s_A 68 AE------------------PNCADPATLTRPVHDAAREGFLDT-----------LVVLHRA-GARLDVCDAWGRLPVDL 117 (136)
T ss_dssp CC------------------SSCCBTTTTBCHHHHHHHHTCHHH-----------HHHHHHT-CCCCCCCSSSSSCHHHH
T ss_pred CC------------------CCCcCCCCCCCHHHHHHHcCCHHH-----------HHHHHHc-CCCCCccCCCCCCHHHH
Confidence 88 8999999 9999999999999999 9999996 99999999999999999
Q ss_pred HHhccCCcchhhHHHHHHHhcCC
Q 038344 160 LAQSKRDIKYWEIGELLRRARGN 182 (383)
Q Consensus 160 A~~~~~~~~~~~i~~~L~~~ga~ 182 (383)
|+. .++.+++++|+++|++
T Consensus 118 A~~----~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 118 AEE----QGHRDIARYLHAATGD 136 (136)
T ss_dssp HHH----HTCHHHHHHHHHHHCC
T ss_pred HHH----cCCHHHHHHHHHcCCC
Confidence 999 7889999999999986
No 59
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.91 E-value=2.3e-24 Score=196.10 Aligned_cols=148 Identities=20% Similarity=0.220 Sum_probs=125.5
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhc----CCcccc---cCCCCCCcHHHHHHHc---CC-------c-------------
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQ----KPELAR---KSDSRKSSALHIASQK---GK-------C------------- 50 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~----~~~~~~---~~d~~g~TpLh~Aa~~---g~-------~------------- 50 (383)
+||||.|+ ..|+.++++.|++. +.++.+ ..|..|+||||+|+.. |+ +
T Consensus 14 ~t~L~~A~---~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i 90 (273)
T 2pnn_A 14 RRSIFDAV---AQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFV 90 (273)
T ss_dssp HHHHHHHH---HTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHH
T ss_pred chHHHHHH---HcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHh
Confidence 38999995 49999999988874 444421 4588999999999986 66 1
Q ss_pred c----ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCC--------------CCCcHH
Q 038344 51 S----ATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDD--------------NGMTIL 112 (383)
Q Consensus 51 ~----~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~--------------~g~TpL 112 (383)
+ ..|.+|+||||+|+..|+.+++++|+++|++ +|.+|. +|+|||
T Consensus 91 ~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~------------------~~~~~~~~~~~~~~~~~~~~~g~tpL 152 (273)
T 2pnn_A 91 NASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD------------------VQAAANGDFFKKTKGRPGFYFGELPL 152 (273)
T ss_dssp TCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC------------------TTCCBCSGGGSSCSSSCCCCSCBSHH
T ss_pred hcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC------------------cCccccccccccccccccccCCCCHH
Confidence 1 1566899999999999999999999999988 666665 899999
Q ss_pred HHHHHcCChhHHHHhhhchhhHHHHhhhc--ccccccccccCCCCHHHHHHhccCCcch---------hhHHHHHHHhcC
Q 038344 113 HLAVADKQIEIWITHITYKSRAIKFFTTS--TAIEVNAVNANGFTAWDILAQSKRDIKY---------WEIGELLRRARG 181 (383)
Q Consensus 113 h~A~~~~~~~~~~~~l~~~~~~v~~Ll~~--~g~d~~~~n~~G~TpL~~A~~~~~~~~~---------~~i~~~L~~~ga 181 (383)
|+|+..|+.++ +++|++. .|++++.+|.+|+||||+|+. .++ .+++++|+++|+
T Consensus 153 ~~A~~~g~~~~-----------v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~----~~~~~~~~~~~~~~~v~~Ll~~ga 217 (273)
T 2pnn_A 153 SLAACTNQLAI-----------VKFLLQNSWQPADISARDSVGNTVLHALVE----VADNTVDNTKFVTSMYNEILILGA 217 (273)
T ss_dssp HHHHHTTCHHH-----------HHHHHHCSSCCCCTTCCCTTSCCHHHHHHH----HCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHH-----------HHHHHhcccCCCCceeeCCCCCcHHHHHHH----ccCcchhHHHHHHHHHHHHHHhhh
Confidence 99999999999 9999993 399999999999999999998 333 689999999999
Q ss_pred CCC
Q 038344 182 NSA 184 (383)
Q Consensus 182 ~~~ 184 (383)
+.+
T Consensus 218 ~~n 220 (273)
T 2pnn_A 218 KLH 220 (273)
T ss_dssp HHC
T ss_pred hcc
Confidence 874
No 60
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=1.2e-23 Score=171.08 Aligned_cols=121 Identities=31% Similarity=0.404 Sum_probs=110.9
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 038344 2 TILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGKCSATDVDGRNALHLAAMEGHIDVLEELVRAKP 81 (383)
Q Consensus 2 TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~ 81 (383)
||||+|+ ..|+.+++++|++.++++ + .+|.+|+||||+|+..|+.+++++|+++|+
T Consensus 16 t~l~~A~---~~g~~~~v~~Ll~~g~~~-~--------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 71 (136)
T 2jab_A 16 KKLLEAA---RAGQDDEVRILMANGADV-N--------------------AKDEYGLTPLYLATAHGHLEIVEVLLKNGA 71 (136)
T ss_dssp HHHHHHH---HHTCHHHHHHHHHTTCCT-T--------------------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHH---HhCCHHHHHHHHHcCCCC-C--------------------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 7999995 499999999999998876 3 356778899999999999999999999988
Q ss_pred CCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHH
Q 038344 82 DAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILA 161 (383)
Q Consensus 82 ~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~ 161 (383)
+ +|.+|.+|+||||+|+..|+.++ +++|++. |++++..|.+|+||||+|+
T Consensus 72 ~------------------~~~~d~~g~t~L~~A~~~~~~~~-----------v~~Ll~~-g~~~~~~~~~g~tpl~~A~ 121 (136)
T 2jab_A 72 D------------------VNAVDAIGFTPLHLAAFIGHLEI-----------AEVLLKH-GADVNAQDKFGKTAFDISI 121 (136)
T ss_dssp C------------------TTCCCTTCCCHHHHHHHHTCHHH-----------HHHHHHT-TCCTTCCCTTSCCHHHHHH
T ss_pred C------------------CCcCCCCCCCHHHHHHHcCCHHH-----------HHHHHHc-CCCCcCcCCCCCCHHHHHH
Confidence 7 89999999999999999999999 9999996 9999999999999999999
Q ss_pred hccCCcchhhHHHHHHHhc
Q 038344 162 QSKRDIKYWEIGELLRRAR 180 (383)
Q Consensus 162 ~~~~~~~~~~i~~~L~~~g 180 (383)
. .++.+++++|+++|
T Consensus 122 ~----~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 122 G----NGNEDLAEILQKLN 136 (136)
T ss_dssp H----TTCHHHHHHHHHC-
T ss_pred H----CCCHHHHHHHHHcC
Confidence 9 88899999999886
No 61
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.91 E-value=3.6e-23 Score=183.60 Aligned_cols=164 Identities=26% Similarity=0.283 Sum_probs=140.9
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHc
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAME 67 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~ 67 (383)
+||||+|+ ..|+.+++++|++.+++.....+..|.||||+|+..|+ ++.+|..|.||||+|+..
T Consensus 43 ~t~L~~A~---~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 119 (240)
T 3eu9_A 43 VTLLHWAA---INNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQF 119 (240)
T ss_dssp CCHHHHHH---HTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCHHHHHH---HhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 48999995 49999999999999999866777779999999999998 566788999999999999
Q ss_pred CCHHHHHHHHHcCCCCCch------HHHHHhhc----------cCCcccccCCCC-CCCcHHHHHHHcCChhHHHHhhhc
Q 038344 68 GHIDVLEELVRAKPDAASA------PLKSFLET----------REGSELLNANDD-NGMTILHLAVADKQIEIWITHITY 130 (383)
Q Consensus 68 g~~~iv~~Ll~~~~~~~~~------~l~~l~~~----------~~~~~~~n~~d~-~g~TpLh~A~~~~~~~~~~~~l~~ 130 (383)
|+.+++++|+++|++.... +++..... ...+..++..+. .|+||||+|+..|+.++
T Consensus 120 ~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~------- 192 (240)
T 3eu9_A 120 GHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTV------- 192 (240)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHH-------
T ss_pred CHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHH-------
Confidence 9999999999998876432 33333311 125677888887 99999999999999999
Q ss_pred hhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCC
Q 038344 131 KSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNS 183 (383)
Q Consensus 131 ~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~ 183 (383)
+++|++. |++++..|..|.||+|+|+. .++.+++++|+++|++.
T Consensus 193 ----v~~Ll~~-g~~~~~~~~~g~t~l~~A~~----~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 193 ----ISLLLEA-GANVDAQNIKGESALDLAKQ----RKNVWMINHLQEARQAK 236 (240)
T ss_dssp ----HHHHHHH-TCCTTCBCTTSCBHHHHHHH----TTCHHHHHHHHHHC---
T ss_pred ----HHHHHHc-CCCCCCcCCCCCCHHHHHHH----cCcHHHHHHHHHhhhcc
Confidence 9999996 99999999999999999999 88999999999999876
No 62
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.90 E-value=2.4e-23 Score=166.01 Aligned_cols=124 Identities=37% Similarity=0.517 Sum_probs=114.3
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGKCSATDVDGRNALHLAAMEGHIDVLEELVRAK 80 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~ 80 (383)
+||||+|+. .|+.+++++|++.++++ + ..|.+|.||||+|+..|+.+++++|+++|
T Consensus 3 ~t~L~~A~~---~~~~~~v~~Ll~~~~~~-~--------------------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 58 (126)
T 1n0r_A 3 RTPLHLAAR---NGHLEVVKLLLEAGADV-N--------------------AKDKNGRTPLHLAARNGHLEVVKLLLEAG 58 (126)
T ss_dssp CCHHHHHHH---HTCHHHHHHHHHHTCCT-T--------------------CCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred ccHHHHHHH---cCcHHHHHHHHHcCCCC-C--------------------CcCCCCCcHHHHHHHcCcHHHHHHHHHcC
Confidence 599999954 99999999999998876 2 34667889999999999999999999998
Q ss_pred CCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHH
Q 038344 81 PDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDIL 160 (383)
Q Consensus 81 ~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A 160 (383)
++ ++.+|..|+||||+|+..|+.++ +++|++. |++++.+|.+|.||||+|
T Consensus 59 ~~------------------~~~~~~~g~t~l~~A~~~~~~~~-----------~~~Ll~~-g~~~~~~~~~g~t~l~~A 108 (126)
T 1n0r_A 59 AD------------------VNAKDKNGRTPLHLAARNGHLEV-----------VKLLLEA-GADVNAKDKNGRTPLHLA 108 (126)
T ss_dssp CC------------------TTCCCTTSCCHHHHHHHTTCHHH-----------HHHHHHT-TCCTTCCCTTSCCHHHHH
T ss_pred CC------------------CcccCCCCCcHHHHHHHcChHHH-----------HHHHHHc-CCCCcccCCCCCCHHHHH
Confidence 87 88999999999999999999999 9999996 999999999999999999
Q ss_pred HhccCCcchhhHHHHHHHhcCC
Q 038344 161 AQSKRDIKYWEIGELLRRARGN 182 (383)
Q Consensus 161 ~~~~~~~~~~~i~~~L~~~ga~ 182 (383)
+. .++.+++++|+++||+
T Consensus 109 ~~----~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 109 AR----NGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HH----TTCHHHHHHHHHHTCC
T ss_pred HH----cCcHHHHHHHHHcCCC
Confidence 99 8899999999999986
No 63
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.90 E-value=2e-24 Score=194.96 Aligned_cols=151 Identities=23% Similarity=0.229 Sum_probs=123.2
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHh----cCCcccccC----CCCCCcHHHHHH---HcCC--------------------
Q 038344 1 MTILQLAVAAALLGHEDFVNEILC----QKPELARKS----DSRKSSALHIAS---QKGK-------------------- 49 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~----~~~~~~~~~----d~~g~TpLh~Aa---~~g~-------------------- 49 (383)
+||||.|+ ..|+.+.++.|++ .+.++ +.. |.+|+||||+|+ ..|+
T Consensus 6 ~~~L~~A~---~~g~~~~v~~ll~~l~~~~~~~-~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 6 RPILFDIV---SRGSPDGLEGLLSFLLTHKKRL-TDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp HHHHHHHH---HHTCGGGGTTHHHHHHHHTCCT-TSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHH---HhCCHHHHHHHHHHHHhcCCCc-chhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 47899995 4999996555555 88877 433 378999999999 5576
Q ss_pred ----ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCC--------------CCCCcH
Q 038344 50 ----CSATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNAND--------------DNGMTI 111 (383)
Q Consensus 50 ----~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d--------------~~g~Tp 111 (383)
.+..|.+|+||||+|+..|+.+++++|+++|++ +|.+| .+|+||
T Consensus 82 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------------------~~~~~~~~~~~~~~~~~~~~~g~tp 143 (260)
T 3jxi_A 82 INSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD------------------VHAQARGRFFQPKDEGGYFYFGELP 143 (260)
T ss_dssp HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC------------------TTCCCEECCCSSSCCCCSCCSCSSH
T ss_pred hcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC------------------cCccccccccCcccccccccCCCCH
Confidence 122344899999999999999999999999988 66666 689999
Q ss_pred HHHHHHcCChhHHHHhhhchhhHHHHhhhc--ccccccccccCCCCHHHHHHhccCCcc-----hhhHHHHHHHhcCCCC
Q 038344 112 LHLAVADKQIEIWITHITYKSRAIKFFTTS--TAIEVNAVNANGFTAWDILAQSKRDIK-----YWEIGELLRRARGNSA 184 (383)
Q Consensus 112 Lh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~--~g~d~~~~n~~G~TpL~~A~~~~~~~~-----~~~i~~~L~~~ga~~~ 184 (383)
||+|+..|+.++ +++|++. .|++++.+|.+|+||||+|+....+.. ..+++++|+++|++..
T Consensus 144 L~~A~~~g~~~~-----------v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~ 212 (260)
T 3jxi_A 144 LSLAACTNQPHI-----------VHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLF 212 (260)
T ss_dssp HHHHHHTTCHHH-----------HHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCHHH-----------HHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccc
Confidence 999999999999 9999993 399999999999999999997322110 1589999999999873
No 64
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.90 E-value=1.5e-23 Score=196.58 Aligned_cols=141 Identities=19% Similarity=0.205 Sum_probs=125.9
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhc-CCcccccCCCCCCcHHHHHHHcCC-----------------ccccCCCCCcHHH
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQ-KPELARKSDSRKSSALHIASQKGK-----------------CSATDVDGRNALH 62 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~-~~~~~~~~d~~g~TpLh~Aa~~g~-----------------~~~~d~~G~tpLh 62 (383)
+||||+|+ ..|+.+++++|+++ |.++ +..|..|.||||.++..++ ++.+|.+|+||||
T Consensus 169 ~T~L~~A~---~~g~~~~v~~LL~~~gad~-n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~ 244 (337)
T 4g8k_A 169 ATALMDAA---EKGHVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLI 244 (337)
T ss_dssp CCHHHHHH---HHTCHHHHHHHHHHSCCCT-TCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHH
T ss_pred CcHHHHHH---HCCCHHHHHHHHhccCCCc-CccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 48999995 49999999999975 6776 8899999999999876654 5778899999999
Q ss_pred HHHHcCCHHHHHHHHHc-CCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhc
Q 038344 63 LAAMEGHIDVLEELVRA-KPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTS 141 (383)
Q Consensus 63 ~A~~~g~~~iv~~Ll~~-~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~ 141 (383)
+|++.|+.++++.|++. +.+ +|.+|.+|+||||+|+..|+.++ +++|++.
T Consensus 245 ~a~~~~~~~~v~~Ll~~~~~~------------------vn~~d~~G~TpL~~A~~~g~~~i-----------v~~Ll~~ 295 (337)
T 4g8k_A 245 LAVEKKHLGLVQRLLEQEHIE------------------INDTDSDGKTALLLAVELKLKKI-----------AELLCKR 295 (337)
T ss_dssp HHHHTTCHHHHHHHHTSTTCC------------------TTCBCTTSCBHHHHHHHTTCHHH-----------HHHHHTT
T ss_pred HHHHhhhhHHHHHHHHhcCCc------------------ccCcCCCCCCHHHHHHHcCCHHH-----------HHHHHHC
Confidence 99999999999999985 444 89999999999999999999999 9999996
Q ss_pred ccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCC
Q 038344 142 TAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSA 184 (383)
Q Consensus 142 ~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~ 184 (383)
|+|+|.. +|||+|+. .++.+++++|+++||++.
T Consensus 296 -GAd~n~~-----~~L~~A~~----~~~~~iv~~Ll~~GA~~d 328 (337)
T 4g8k_A 296 -GASTDCG-----DLVMTARR----NYDHSLVKVLLSHGAKED 328 (337)
T ss_dssp -SCSSTTC-----CHHHHHHH----TTCHHHHHHHHHTTCCC-
T ss_pred -CCCCCCC-----CHHHHHHH----cCCHHHHHHHHHCcCCCC
Confidence 9998754 59999999 888999999999999984
No 65
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.90 E-value=1.6e-23 Score=176.92 Aligned_cols=114 Identities=31% Similarity=0.452 Sum_probs=102.7
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHc
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAME 67 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~ 67 (383)
+||||+|+ ..|+.++++.|++.++++ +.+|.+|+||||+|+..|+ ++.+|.+|+||||+|++.
T Consensus 38 ~t~l~~a~---~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~ 113 (169)
T 4gpm_A 38 RTPLHHAA---ENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAEN 113 (169)
T ss_dssp CCHHHHHH---HTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCHHHHHH---HcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHc
Confidence 59999995 499999999999999998 8899999999999999998 678999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhccccccc
Q 038344 68 GHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVN 147 (383)
Q Consensus 68 g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~ 147 (383)
|+.+++++|+++|++ ++.+|.+|+||||+|+..|+.++ +++|++. |++++
T Consensus 114 g~~~~v~~Ll~~gad------------------~~~~d~~G~TpL~~A~~~g~~~i-----------v~~Ll~~-GA~ie 163 (169)
T 4gpm_A 114 GHKEVVKLLISKGAD------------------VNTSDSDGRTPLDLAREHGNEEV-----------VKLLEKQ-GGWLE 163 (169)
T ss_dssp TCHHHHHHHHHTTCC------------------TTCCCTTSCCHHHHHHHTTCHHH-----------HHHHHTC------
T ss_pred CCHHHHHHHHHcCCC------------------ccccCCCCCCHHHHHHHcCCHHH-----------HHHHHHC-CCCcC
Confidence 999999999999988 89999999999999999999999 9999996 99986
Q ss_pred c
Q 038344 148 A 148 (383)
Q Consensus 148 ~ 148 (383)
.
T Consensus 164 ~ 164 (169)
T 4gpm_A 164 H 164 (169)
T ss_dssp -
T ss_pred C
Confidence 5
No 66
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.90 E-value=1.3e-23 Score=193.34 Aligned_cols=128 Identities=30% Similarity=0.393 Sum_probs=105.7
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCC-----------
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVD----------- 56 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~----------- 56 (383)
+||||+|+. .|+.+++++|++.|+++ +..|..|+||||+|+..|+ ++..|.+
T Consensus 74 ~t~L~~A~~---~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 149 (299)
T 1s70_B 74 LTALHQACI---DDNVDMVKFLVENGANI-NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEE 149 (299)
T ss_dssp CBHHHHHHH---TTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSH
T ss_pred CCHHHHHHH---cCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhc
Confidence 589999954 89999999999999988 7889999999999999988 3334444
Q ss_pred -------------------------------------------------CCcHHHHHHHcCCHHHHHHHHHcCCCCCchH
Q 038344 57 -------------------------------------------------GRNALHLAAMEGHIDVLEELVRAKPDAASAP 87 (383)
Q Consensus 57 -------------------------------------------------G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~ 87 (383)
|.||||+|+..|+.+++++|+++|++
T Consensus 150 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d----- 224 (299)
T 1s70_B 150 AMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD----- 224 (299)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC-----
T ss_pred chHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCC-----
Confidence 55555555555555555555555544
Q ss_pred HHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHh
Q 038344 88 LKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQ 162 (383)
Q Consensus 88 l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~ 162 (383)
+|.+|.+|+||||+|+..|+.++ +++|++. |+|++.+|..|+||||+|.+
T Consensus 225 -------------~~~~d~~g~tpL~~A~~~~~~~~-----------v~~Ll~~-gad~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 225 -------------VNIKDYDGWTPLHAAAHWGKEEA-----------CRILVEN-LCDMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp -------------TTCCCTTCCCHHHHHHHTTCHHH-----------HHHHHHT-TCCTTCCCTTSCCTTTSCCS
T ss_pred -------------CCCcCCCCCcHHHHHHhcCCHHH-----------HHHHHHc-CCCCCCcCCCCCCHHHHHHH
Confidence 89999999999999999999999 9999996 99999999999999999976
No 67
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.89 E-value=3.9e-24 Score=183.64 Aligned_cols=143 Identities=13% Similarity=0.094 Sum_probs=123.9
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-----------------ccccCCCCCcHHHH
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-----------------CSATDVDGRNALHL 63 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-----------------~~~~d~~G~tpLh~ 63 (383)
+++|+.| +..|+.+.++.+++.+.+. ..|..|+||||+|+..|+ ++.+|.+|+||||+
T Consensus 7 ~~~l~~A---a~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~ 81 (186)
T 3t8k_A 7 YRTVSAA---AMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFP 81 (186)
T ss_dssp CSSHHHH---HHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHH
T ss_pred ccHHHHH---HHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence 4678888 5599999999999988654 223779999999999885 78889999999999
Q ss_pred HHHcCC------HHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCC-cHHHHHHHcCC-----hhHHHHhhhch
Q 038344 64 AAMEGH------IDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGM-TILHLAVADKQ-----IEIWITHITYK 131 (383)
Q Consensus 64 A~~~g~------~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~-TpLh~A~~~~~-----~~~~~~~l~~~ 131 (383)
|+..|+ .+++++|+++|++ +|.+|.+|+ ||||+|+..+. .++
T Consensus 82 a~~~~~~~~~~~~~iv~~Ll~~Gad------------------in~~d~~g~ttpLh~A~~~~~~~~~~~~i-------- 135 (186)
T 3t8k_A 82 LFQGGGNDITGTTELCKIFLEKGAD------------------ITALYKPYKIVVFKNIFNYFVDENEMIPL-------- 135 (186)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCC------------------SSSCBGGGTBCTTGGGGGCCSCHHHHHHH--------
T ss_pred HHHcCCcchhhHHHHHHHHHHCCCC------------------CCccCCCcCchHHHHHHHcCCChhhHHHH--------
Confidence 999987 6889999999988 999999999 99999999554 345
Q ss_pred hhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcC
Q 038344 132 SRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARG 181 (383)
Q Consensus 132 ~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga 181 (383)
+++|++..|+|++.+|..|.||||+|+. .++.+++++|.+...
T Consensus 136 ---v~~Ll~~~gad~~~~d~~G~TpL~~A~~----~~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 136 ---YKLIFSQSGLQLLIKDKWGLTALEFVKR----CQKPIALKMMEDYIK 178 (186)
T ss_dssp ---HHHHHTSTTCCTTCCCTTSCCHHHHHHT----TTCHHHHHHHHHHHH
T ss_pred ---HHHHHHhcCCCCcccCCCCCCHHHHHHH----cCCHHHHHHHHHHHH
Confidence 8999983499999999999999999999 888899999987653
No 68
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=1.1e-23 Score=175.29 Aligned_cols=125 Identities=22% Similarity=0.202 Sum_probs=100.5
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCc-HHHHHHH
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRN-ALHLAAM 66 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~t-pLh~A~~ 66 (383)
.||||+|+. .|+.+++++|+++++++ +..|..|+||||+|+ .|+ ++.+|.+|+| |||+|+.
T Consensus 13 ~t~L~~A~~---~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~ 87 (156)
T 1bi7_B 13 ADWLATAAA---RGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAR 87 (156)
T ss_dssp TTHHHHHHH---HTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHH
T ss_pred hHHHHHHHH---cCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHH
Confidence 489999954 99999999999999988 888999999999985 666 6788999999 9999999
Q ss_pred cCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccc
Q 038344 67 EGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEV 146 (383)
Q Consensus 67 ~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~ 146 (383)
.|+.+++++|+++|++ +|.+|.+|+||||+|+..|+.++ +++|++. |+++
T Consensus 88 ~~~~~~v~~Ll~~ga~------------------~~~~d~~g~tpl~~A~~~~~~~~-----------v~~Ll~~-ga~~ 137 (156)
T 1bi7_B 88 EGFLDTLVVLHRAGAR------------------LDVRDAWGRLPVDLAEELGHRDV-----------ARYLRAA-AGGT 137 (156)
T ss_dssp HTCHHHHHHHHHHTCC------------------SSCCCTTCCCHHHHHHHHTCHHH-----------HHHHSSC-C---
T ss_pred CCCHHHHHHHHHcCCC------------------CcccCCCCCCHHHHHHHhCHHHH-----------HHHHHHc-CCCC
Confidence 9999999999999888 89999999999999999999999 9999996 9999
Q ss_pred cccccCCCCHHHHH
Q 038344 147 NAVNANGFTAWDIL 160 (383)
Q Consensus 147 ~~~n~~G~TpL~~A 160 (383)
+.+|..|.||.+-+
T Consensus 138 ~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 138 RGSNHARIDAAEGP 151 (156)
T ss_dssp --------------
T ss_pred CccCcCcCcccccC
Confidence 99999999998744
No 69
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.89 E-value=1.3e-22 Score=174.56 Aligned_cols=121 Identities=22% Similarity=0.239 Sum_probs=114.1
Q ss_pred cccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccC
Q 038344 30 ARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETRE 96 (383)
Q Consensus 30 ~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~ 96 (383)
.+.+|..|+||||+|+..|+ ++.+|.+|+||||+|+..|+.+++++|+++|++
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-------------- 93 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN-------------- 93 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC--------------
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCC--------------
Confidence 46789999999999999998 567888999999999999999999999999888
Q ss_pred CcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHH
Q 038344 97 GSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELL 176 (383)
Q Consensus 97 ~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L 176 (383)
++.+|..|+||||+|+..|+.++ +++|++. |++++..|.+|.||||+|+. .++.+++++|
T Consensus 94 ----~~~~~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~-g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~L 153 (192)
T 2rfm_A 94 ----VNTKDFSGKTPLMWSIIFGYSEM-----------SYFLLEH-GANVNDRNLEGETPLIVASK----YGRSEIVKKL 153 (192)
T ss_dssp ----TTCCCTTSCCHHHHHHHHTCHHH-----------HHHHHHT-TCCSSCCCTTCCCHHHHHHH----HTCHHHHHHH
T ss_pred ----CCCCCCCCCcHHHHHHHcCCHHH-----------HHHHHHC-CCCCCCCCCCCCCHHHHHHH----cCCHHHHHHH
Confidence 88999999999999999999999 9999996 99999999999999999999 8889999999
Q ss_pred HHhcCCCC
Q 038344 177 RRARGNSA 184 (383)
Q Consensus 177 ~~~ga~~~ 184 (383)
+++|+++.
T Consensus 154 l~~ga~~~ 161 (192)
T 2rfm_A 154 LELGADIS 161 (192)
T ss_dssp HHTTCCTT
T ss_pred HHCCCCCC
Confidence 99999874
No 70
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.88 E-value=3.9e-23 Score=188.65 Aligned_cols=146 Identities=19% Similarity=0.216 Sum_probs=131.2
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHhcCCc-ccccCCCCCCcHHHHHHHcCC--------------ccccCCCCCcHHHHHH-
Q 038344 2 TILQLAVAAALLGHEDFVNEILCQKPE-LARKSDSRKSSALHIASQKGK--------------CSATDVDGRNALHLAA- 65 (383)
Q Consensus 2 TpLh~A~~Aa~~g~~~~v~~Ll~~~~~-~~~~~d~~g~TpLh~Aa~~g~--------------~~~~d~~G~tpLh~A~- 65 (383)
+++|.| +..|+.+.++.+++.+.+ ..+..|.+|+||||+|+..|+ ++..|.+|+||||+|+
T Consensus 78 ~~l~~a---~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~ 154 (276)
T 4hbd_A 78 SDAHPE---LVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTAL 154 (276)
T ss_dssp TTCCHH---HHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGG
T ss_pred cCCCHH---HHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHH
Confidence 566776 458899999999888765 248889999999999999998 5677889999999999
Q ss_pred ----HcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhc
Q 038344 66 ----MEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTS 141 (383)
Q Consensus 66 ----~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~ 141 (383)
..++.+++++|++.|.+ .+..|..|+||||+|+..|+.++ +++|++.
T Consensus 155 ~~~~~~~~~~~v~~Ll~~g~~------------------~~~~~~~g~tpLh~A~~~g~~~~-----------v~~Ll~~ 205 (276)
T 4hbd_A 155 ATLKTQDDIETVLQLFRLGNI------------------NAKASQAGQTALMLAVSHGRVDV-----------VKALLAC 205 (276)
T ss_dssp CCCCSHHHHHHHHHHHHHSCT------------------TCCCTTTCCCHHHHHHHTTCHHH-----------HHHHHHT
T ss_pred HHhhhhhhHHHHHHHHHcCCC------------------ccccCCCCCCHHHHHHHcCCHHH-----------HHHHHhC
Confidence 67899999999998876 77889999999999999999999 9999996
Q ss_pred ccccccccccCCCCHHHHHHhccCCcchhhHHHHHHH-hcCCCC
Q 038344 142 TAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRR-ARGNSA 184 (383)
Q Consensus 142 ~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~-~ga~~~ 184 (383)
|+|+|.+|.+|+||||+|+. .++.+++++|++ .|++++
T Consensus 206 -gad~n~~d~~G~TpLh~A~~----~g~~~iv~~Ll~~~gad~~ 244 (276)
T 4hbd_A 206 -EADVNVQDDDGSTALMCACE----HGHKEIAGLLLAVPSCDIS 244 (276)
T ss_dssp -TCCTTCCCTTSCCHHHHHHH----HTCHHHHHHHHTSTTCCTT
T ss_pred -CCCCCCCCCCCCCHHHHHHH----CCCHHHHHHHHhcCCCCCc
Confidence 99999999999999999999 888999999999 898874
No 71
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.88 E-value=2.2e-22 Score=169.98 Aligned_cols=122 Identities=24% Similarity=0.246 Sum_probs=108.4
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHc
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAME 67 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~ 67 (383)
+||||+|+ ..|+.+++++|++.++++ +..|..|+||||+|+..|+ ++.+|.+|+||||+|+..
T Consensus 37 ~t~L~~A~---~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 112 (172)
T 3v30_A 37 FTPLIWAS---AFGEIETVRFLLEWGADP-HILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRG 112 (172)
T ss_dssp CCHHHHHH---HTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCHHHHHH---HcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 59999995 499999999999999998 8889999999999999998 677889999999999999
Q ss_pred CCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhccccccc
Q 038344 68 GHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVN 147 (383)
Q Consensus 68 g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~ 147 (383)
|+.+++++|+++|++ ++.+|.+|+||||+|+..|+.++ +++|++. ++++.
T Consensus 113 ~~~~~v~~Ll~~ga~------------------~~~~~~~g~t~l~~A~~~~~~~~-----------~~~L~~~-~~~~~ 162 (172)
T 3v30_A 113 NHVKCVEALLARGAD------------------LTTEADSGYTPMDLAVALGYRKV-----------QQVIENH-ILKLF 162 (172)
T ss_dssp TCHHHHHHHHHTTCC------------------TTCCCTTSCCHHHHHHHHTCHHH-----------HHHHHHH-HHHHS
T ss_pred CCHHHHHHHHHcCCC------------------ccccCCCCCCHHHHHHHhCcHHH-----------HHHHHHH-HHHHh
Confidence 999999999999888 89999999999999999999999 9999996 99999
Q ss_pred ccccCCCCH
Q 038344 148 AVNANGFTA 156 (383)
Q Consensus 148 ~~n~~G~Tp 156 (383)
..|..|.||
T Consensus 163 ~~~~~~~~p 171 (172)
T 3v30_A 163 QSNLVPADP 171 (172)
T ss_dssp CC-------
T ss_pred cccCCCCCC
Confidence 999999887
No 72
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.87 E-value=8.8e-23 Score=190.93 Aligned_cols=148 Identities=18% Similarity=0.087 Sum_probs=122.1
Q ss_pred HcCCHHHHHHHHhcCCccccc-CCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHcCC---HHHHH
Q 038344 12 LLGHEDFVNEILCQKPELARK-SDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAMEGH---IDVLE 74 (383)
Q Consensus 12 ~~g~~~~v~~Ll~~~~~~~~~-~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~g~---~~iv~ 74 (383)
..+..++++.|++.+.++ +. .|.+|+||||+|+..|+ ++.+|.+|+||||+|+.+|+ .++++
T Consensus 106 ~~~~~~~~~~l~~~g~dv-n~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~ 184 (327)
T 1sw6_A 106 DSLLQEVNDAFPNTQLNL-NIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFE 184 (327)
T ss_dssp HHHHHHHHHHCTTSCCCS-CSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHH
T ss_pred HhhHHHHHHHHHhcCCCc-ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHH
Confidence 356678899999999998 66 89999999999999999 77899999999999999998 78888
Q ss_pred HHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHH----cCChhHHHHhhhchhhH----------------
Q 038344 75 ELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVA----DKQIEIWITHITYKSRA---------------- 134 (383)
Q Consensus 75 ~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~----~~~~~~~~~~l~~~~~~---------------- 134 (383)
.|++.+.. .++.+|.+|+||||+|+. .|+.+++..++......
T Consensus 185 ~ll~~~~~-----------------~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~ 247 (327)
T 1sw6_A 185 ALLDYLYP-----------------CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEK 247 (327)
T ss_dssp HHHHHHGG-----------------GGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----
T ss_pred HHHHhhhc-----------------cccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcc
Confidence 88886522 388999999999999999 89999944443321100
Q ss_pred --------------------HHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCC
Q 038344 135 --------------------IKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSA 184 (383)
Q Consensus 135 --------------------v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~ 184 (383)
+++|++. ++|.+|.+|+||||+|+. .++.+++++|+++|+++.
T Consensus 248 g~~~~~~~~~g~t~L~~a~~~~~Ll~~---~~n~~d~~G~TpLh~A~~----~g~~~~v~~Ll~~Gad~~ 310 (327)
T 1sw6_A 248 ESKPNDKNGERKDSILENLDLKWIIAN---MLNAQDSNGDTCLNIAAR----LGNISIVDALLDYGADPF 310 (327)
T ss_dssp ------------CHHHHHCSHHHHHHH---TTTCCCTTSCCHHHHHHH----HCCHHHHHHHHHTTCCTT
T ss_pred cCCcccccccCCChhHHHHHHHHHHHh---CCCCCCCCCCCHHHHHHH----cCCHHHHHHHHHcCCCCc
Confidence 2333332 688999999999999999 889999999999999984
No 73
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.87 E-value=7.5e-23 Score=166.36 Aligned_cols=124 Identities=24% Similarity=0.283 Sum_probs=103.4
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGKCSATDVDGRNALHLAAMEGHIDVLEELVRAK 80 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~ 80 (383)
+||||+|+. .|+.+++++|++.++++ +.+|.+|+||||+|+..|+.+++++|+++|
T Consensus 11 ~t~L~~A~~---~~~~~~~~~Ll~~g~~~---------------------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 66 (137)
T 3c5r_A 11 ETLLHIASI---KGDIPSVEYLLQNGSDP---------------------NVKDHAGWTPLHEACNHGHLKVVELLLQHK 66 (137)
T ss_dssp CCHHHHHHH---HTCHHHHHHHHHTTCCS---------------------CCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCHHHHHHH---cCCHHHHHHHHHcCCCC---------------------CcCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 478888844 78888888888887765 345677889999999999999999999988
Q ss_pred CCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHH
Q 038344 81 PDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDIL 160 (383)
Q Consensus 81 ~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A 160 (383)
++ ++.+|.+|+||||+|+..|+.++ +++|++. |++++.+|.+|.||+|+|
T Consensus 67 ~~------------------~~~~~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~-ga~~~~~~~~g~tpl~~A 116 (137)
T 3c5r_A 67 AL------------------VNTTGYQNDSPLHDAAKNGHVDI-----------VKLLLSY-GASRNAVNIFGLRPVDYT 116 (137)
T ss_dssp CC------------------TTCCCGGGCCHHHHHHHTTCHHH-----------HHHHHHT-TCCTTCCCTTSCCGGGGC
T ss_pred Cc------------------ccCcCCCCCCHHHHHHHcCCHHH-----------HHHHHHc-CCCCCCCCCCCCCHHHHH
Confidence 87 88999999999999999999999 9999986 999999999999999999
Q ss_pred HhccCCcchhhHHHHHHHhcCC
Q 038344 161 AQSKRDIKYWEIGELLRRARGN 182 (383)
Q Consensus 161 ~~~~~~~~~~~i~~~L~~~ga~ 182 (383)
+. .+..+++++|.+.+..
T Consensus 117 ~~----~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 117 DD----ESMKSLLLLPEKNESS 134 (137)
T ss_dssp CC----HHHHHHHSCC------
T ss_pred hh----ccHHHHHhhccccccC
Confidence 88 7777888777766543
No 74
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.87 E-value=1.3e-21 Score=164.39 Aligned_cols=116 Identities=22% Similarity=0.254 Sum_probs=109.5
Q ss_pred CCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCccccc
Q 038344 36 RKSSALHIASQKGK-------------CSATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLN 102 (383)
Q Consensus 36 ~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n 102 (383)
+|.||||.|+..|+ ++.+|.+|.||||+|+..|+.+++++|+++|++ ++
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------~~ 63 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD------------------PQ 63 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------------TT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC------------------CC
Confidence 58999999999999 677899999999999999999999999999887 88
Q ss_pred CCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCC
Q 038344 103 ANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGN 182 (383)
Q Consensus 103 ~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~ 182 (383)
.+|..|+||||+|+..|+.++ +++|++. |++++..|..|.||||+|+. .++.+++++|+++|++
T Consensus 64 ~~~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~-g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~g~~ 127 (167)
T 3v31_A 64 LLGKGRESALSLACSKGYTDI-----------VKMLLDC-GVDVNEYDWNGGTPLLYAVH----GNHVKCVKMLLESGAD 127 (167)
T ss_dssp CCCTTCCCHHHHHHHHTCHHH-----------HHHHHHH-TCCTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHTTCC
T ss_pred CcCCCCCcHHHHHHHcCCHHH-----------HHHHHHC-CCCCCcCCCCCCCHHHHHHH----cCCHHHHHHHHHcCCC
Confidence 999999999999999999999 9999996 99999999999999999999 8899999999999998
Q ss_pred CCC
Q 038344 183 SAK 185 (383)
Q Consensus 183 ~~~ 185 (383)
+..
T Consensus 128 ~~~ 130 (167)
T 3v31_A 128 PTI 130 (167)
T ss_dssp TTC
T ss_pred CCC
Confidence 743
No 75
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.87 E-value=1.2e-22 Score=168.98 Aligned_cols=120 Identities=19% Similarity=0.258 Sum_probs=105.6
Q ss_pred ccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCC
Q 038344 31 RKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREG 97 (383)
Q Consensus 31 ~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~ 97 (383)
+..+..|.||||+|+..|+ ++.+|.+|+||||+|+ .|+.+++++|+++|++
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~--------------- 69 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE--------------- 69 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC---------------
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC---------------
Confidence 4568889999999999999 6678899999999985 9999999999999887
Q ss_pred cccccCCCCCCCc-HHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHH
Q 038344 98 SELLNANDDNGMT-ILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELL 176 (383)
Q Consensus 98 ~~~~n~~d~~g~T-pLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L 176 (383)
+|.+|..|+| |||+|+..|+.++ +++|++. |++++.+|.+|+||||+|+. .++.+++++|
T Consensus 70 ---~~~~d~~g~ttpL~~A~~~~~~~~-----------v~~Ll~~-ga~~~~~d~~g~tpl~~A~~----~~~~~~v~~L 130 (156)
T 1bi7_B 70 ---PNCADPATLTRPVHDAAREGFLDT-----------LVVLHRA-GARLDVRDAWGRLPVDLAEE----LGHRDVARYL 130 (156)
T ss_dssp ---CCCCCTTTCCCHHHHHHHHTCHHH-----------HHHHHHH-TCCSSCCCTTCCCHHHHHHH----HTCHHHHHHH
T ss_pred ---CCCcCCCCCcHHHHHHHHCCCHHH-----------HHHHHHc-CCCCcccCCCCCCHHHHHHH----hCHHHHHHHH
Confidence 8999999999 9999999999999 9999996 99999999999999999999 8889999999
Q ss_pred HHhcCCCCC
Q 038344 177 RRARGNSAK 185 (383)
Q Consensus 177 ~~~ga~~~~ 185 (383)
+++|+++..
T Consensus 131 l~~ga~~~~ 139 (156)
T 1bi7_B 131 RAAAGGTRG 139 (156)
T ss_dssp SSCC-----
T ss_pred HHcCCCCCc
Confidence 999999843
No 76
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.87 E-value=1.3e-21 Score=164.12 Aligned_cols=118 Identities=25% Similarity=0.334 Sum_probs=108.9
Q ss_pred CCCCCCcHHHHHHHcCC--------------ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCc
Q 038344 33 SDSRKSSALHIASQKGK--------------CSATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGS 98 (383)
Q Consensus 33 ~d~~g~TpLh~Aa~~g~--------------~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~ 98 (383)
.|.+|.||||.|+..|+ .+..|..|.||||+|+..|+.+++++|+++|++
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---------------- 67 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD---------------- 67 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC----------------
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC----------------
Confidence 47788999999999999 345677889999999999999999999999887
Q ss_pred ccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHH
Q 038344 99 ELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRR 178 (383)
Q Consensus 99 ~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~ 178 (383)
++.+|.+|+||||+|+..|+.++ +++|++. |++++..|..|+||||+|+. .++.+++++|++
T Consensus 68 --~~~~~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~-g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~ 129 (165)
T 3twr_A 68 --VHAKDKGGLVPLHNACSYGHYEV-----------AELLVKH-GAVVNVADLWKFTPLHEAAA----KGKYEICKLLLQ 129 (165)
T ss_dssp --TTCCCTTSCCHHHHHHHTTCHHH-----------HHHHHHT-TCCTTCCCTTCCCHHHHHHH----TTCHHHHHHHHH
T ss_pred --CCccCCCCCCHHHHHHHcCcHHH-----------HHHHHhC-CCCCCCcCCCCCCHHHHHHH----cCCHHHHHHHHH
Confidence 89999999999999999999999 9999996 99999999999999999999 889999999999
Q ss_pred hcCCCC
Q 038344 179 ARGNSA 184 (383)
Q Consensus 179 ~ga~~~ 184 (383)
+|+++.
T Consensus 130 ~ga~~~ 135 (165)
T 3twr_A 130 HGADPT 135 (165)
T ss_dssp TTCCTT
T ss_pred cCCCCc
Confidence 999874
No 77
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.87 E-value=5.6e-22 Score=158.11 Aligned_cols=107 Identities=25% Similarity=0.359 Sum_probs=97.6
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 038344 2 TILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGKCSATDVDGRNALHLAAMEGHIDVLEELVRAKP 81 (383)
Q Consensus 2 TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~ 81 (383)
||||.|+ ..|+.+++++|++.++++ + .+|.+|+||||+|+..|+.+++++|+++|+
T Consensus 9 ~~l~~A~---~~~~~~~v~~ll~~~~~~-~--------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 64 (123)
T 3aaa_C 9 KEFMWAL---KNGDLDEVKDYVAKGEDV-N--------------------RTLEGGRKPLHYAADCGQLEILEFLLLKGA 64 (123)
T ss_dssp HHHHHHH---HTTCHHHHHHHHHTTCCT-T--------------------SCCTTSSCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred hHHHHHH---HcCCHHHHHHHHHcCCCc-C--------------------ccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 7999995 499999999999998876 3 356678899999999999999999999888
Q ss_pred CCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHH
Q 038344 82 DAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILA 161 (383)
Q Consensus 82 ~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~ 161 (383)
+ +|.+|.+|+||||+|+..|+.++ +++|++. |++++.+|.+|.||+|+|.
T Consensus 65 ~------------------~~~~d~~g~tpL~~A~~~~~~~~-----------v~~Ll~~-ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 65 D------------------INAPDKHHITPLLSAVYEGHVSC-----------VKLLLSK-GADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp C------------------TTCCCTTSCCHHHHHHHHTCHHH-----------HHHHHHT-TCCTTCCCTTSCCHHHHCC
T ss_pred C------------------CCcCCCCCCCHHHHHHHcCCHHH-----------HHHHHHc-CCCCCCcCCCCCCHHHHhC
Confidence 7 89999999999999999999999 9999996 9999999999999999996
Q ss_pred h
Q 038344 162 Q 162 (383)
Q Consensus 162 ~ 162 (383)
.
T Consensus 115 ~ 115 (123)
T 3aaa_C 115 N 115 (123)
T ss_dssp C
T ss_pred C
Confidence 5
No 78
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.86 E-value=4.6e-22 Score=176.51 Aligned_cols=102 Identities=22% Similarity=0.259 Sum_probs=89.5
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhh
Q 038344 50 CSATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHIT 129 (383)
Q Consensus 50 ~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~ 129 (383)
++.+|.+|+||||+|+..|+.+++++|+++|++ +|.+|.+|+||||+|+..|+.++
T Consensus 47 ~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~------------------~n~~d~~g~tpLh~A~~~g~~~~------ 102 (229)
T 2vge_A 47 PSQPNEEGITALHNAICGANYSIVDFLITAGAN------------------VNSPDSHGWTPLHCAASCNDTVI------ 102 (229)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------------TTCCCTTCCCHHHHHHHTTCHHH------
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC------------------CCCCCCCCCCHHHHHHHcCCHHH------
Confidence 355677889999999999999999999998887 88899999999999999999999
Q ss_pred chhhHHHHhhhcccccccccc-cCCCCHHHHH--HhccCCcchhhHHHHHHHhcCCCCC
Q 038344 130 YKSRAIKFFTTSTAIEVNAVN-ANGFTAWDIL--AQSKRDIKYWEIGELLRRARGNSAK 185 (383)
Q Consensus 130 ~~~~~v~~Ll~~~g~d~~~~n-~~G~TpL~~A--~~~~~~~~~~~i~~~L~~~ga~~~~ 185 (383)
+++|++. |++++..+ .+|.||||+| +. .++.+++++|+++|++++.
T Consensus 103 -----v~~Ll~~-ga~~~~~~~~~g~tpL~~A~a~~----~~~~~~v~~Ll~~ga~~~~ 151 (229)
T 2vge_A 103 -----CMALVQH-GAAIFATTLSDGATAFEKCDPYR----EGYADCATYLADVEQSMGL 151 (229)
T ss_dssp -----HHHHHTT-TCCTTCCCSSTTCCTGGGCCTTS----TTHHHHHHHHHHHHHHTTT
T ss_pred -----HHHHHHc-CCCcccccCCCCCCHHHHHHHHh----cChHHHHHHHHHcCCCccc
Confidence 9999986 99999886 5999999998 77 7889999999999988754
No 79
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=2.3e-21 Score=146.68 Aligned_cols=93 Identities=39% Similarity=0.569 Sum_probs=87.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHH
Q 038344 56 DGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAI 135 (383)
Q Consensus 56 ~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v 135 (383)
+|+||||+|+..|+.+++++|+++|++ +|.+|.+|+||||+|+..|+.++ +
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------~n~~d~~g~t~L~~A~~~~~~~~-----------v 51 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD------------------VNAKDKNGRTPLHLAARNGHLEV-----------V 51 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC------------------TTCCCTTSCCHHHHHHHTTCHHH-----------H
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC------------------CcccCCCCCCHHHHHHHcCCHHH-----------H
Confidence 589999999999999999999999888 89999999999999999999999 9
Q ss_pred HHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCC
Q 038344 136 KFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGN 182 (383)
Q Consensus 136 ~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~ 182 (383)
++|++. |++++.+|.+|+||||+|+. .++.+++++|+++|++
T Consensus 52 ~~Ll~~-ga~~~~~d~~g~t~l~~A~~----~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 52 KLLLEA-GADVNAKDKNGRTPLHLAAR----NGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHT-TCCTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHTTCC
T ss_pred HHHHHc-CCCCCccCCCCCCHHHHHHH----cCCHHHHHHHHHcCCC
Confidence 999996 99999999999999999999 8899999999999985
No 80
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=9.5e-22 Score=173.28 Aligned_cols=126 Identities=21% Similarity=0.229 Sum_probs=105.7
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCCccccCCCCCcHHHHHHHcCCHHHHHHHHHc-
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGKCSATDVDGRNALHLAAMEGHIDVLEELVRA- 79 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~- 79 (383)
+||||+|+ ..|+.++++.|++.++++ +.+|.+|+||||+|+..|+.+++++|+++
T Consensus 74 ~t~L~~A~---~~g~~~~v~~Ll~~g~~~---------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 129 (222)
T 3ehr_A 74 DNPLHEAA---KRGNLSWLRECLDNRVGV---------------------NGLDKAGSTALYWACHGGHKDIVEMLFTQP 129 (222)
T ss_dssp SCHHHHHH---HHTCHHHHHHHHHTTCCT---------------------TCCCTTSCCHHHHHHHTTCHHHHHHHTTST
T ss_pred cccccccc---ccCcHHHHHHHHhCCCCc---------------------cccCCCCCCHHHHHHHcCCHHHHHHHHcCC
Confidence 48999995 489999999999988776 34567788999999999999999999998
Q ss_pred CCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHH
Q 038344 80 KPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDI 159 (383)
Q Consensus 80 ~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~ 159 (383)
|.+ +|.+|.+|+||||+|+..|+.++ +++|++. |++++.+|.+|+||||+
T Consensus 130 g~~------------------~~~~d~~g~tpL~~A~~~~~~~~-----------v~~Ll~~-ga~~~~~~~~g~t~l~~ 179 (222)
T 3ehr_A 130 NIE------------------LNQQNKLGDTALHAAAWKGYADI-----------VQLLLAK-GARTDLRNIEKKLAFDM 179 (222)
T ss_dssp TCC------------------CCCCCTTSCCHHHHHHHHTCHHH-----------HHHHHHH-TCCSCCCCTTSCCHHHH
T ss_pred CCC------------------ccccCCCCCCHHHHHHHcCCHHH-----------HHHHHHc-CCCCccccCCCCCHHHH
Confidence 766 89999999999999999999999 9999997 99999999999999999
Q ss_pred HHhccCCcchhhHHHHHHHhcCCCC
Q 038344 160 LAQSKRDIKYWEIGELLRRARGNSA 184 (383)
Q Consensus 160 A~~~~~~~~~~~i~~~L~~~ga~~~ 184 (383)
|+. .+..++++.|++.|+...
T Consensus 180 A~~----~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 180 ATN----AACASLLKKKQGTDAVRT 200 (222)
T ss_dssp CCS----HHHHHHHC----------
T ss_pred hcc----hhHHHHHHHHhccchhhh
Confidence 998 889999999999998873
No 81
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.86 E-value=5.5e-22 Score=187.93 Aligned_cols=145 Identities=17% Similarity=0.085 Sum_probs=126.2
Q ss_pred CChHHHHHHHHHcC--CHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC------------------ccccCCCCCcH
Q 038344 1 MTILQLAVAAALLG--HEDFVNEILCQKPELARKSDSRKSSALHIASQKGK------------------CSATDVDGRNA 60 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g--~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~------------------~~~~d~~G~tp 60 (383)
+||||+|+ ..| +.+++++|++.|+++ +..|..|+||||+|+..|+ ++..|.+|+||
T Consensus 139 ~t~L~~A~---~~g~~~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~ 214 (364)
T 3ljn_A 139 QTALHWCV---GLGPEYLEMIKILVQLGASP-TAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSH 214 (364)
T ss_dssp CCHHHHHH---HSCGGGHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCT
T ss_pred CCHHHHHH---HcCCchHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcH
Confidence 59999995 489 999999999999998 8889999999999999998 34678899999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhh
Q 038344 61 LHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTT 140 (383)
Q Consensus 61 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~ 140 (383)
||+|+..|+.+++++|+++|++ +|.+|.+|+||||+|+..|+.++ +++|++
T Consensus 215 L~~A~~~g~~~~v~~Ll~~gad------------------~~~~d~~g~tpL~~A~~~g~~~~-----------v~~Ll~ 265 (364)
T 3ljn_A 215 LHWAILINWEDVAMRFVEMGID------------------VNMEDNEHTVPLYLSVRAAMVLL-----------TKELLQ 265 (364)
T ss_dssp THHHHTTTCHHHHHHHHTTTCC------------------TTCCCTTSCCHHHHHHHTCCHHH-----------HHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCC------------------CCCCCCCCCCHHHHHHHhChHHH-----------HHHHHH
Confidence 9999999999999999999888 89999999999999999999999 999998
Q ss_pred cccccccc------------cccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCC
Q 038344 141 STAIEVNA------------VNANGFTAWDILAQSKRDIKYWEIGELLRRARGNS 183 (383)
Q Consensus 141 ~~g~d~~~------------~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~ 183 (383)
. |++++. .+..|.||++.|+. .+..+.+..|+..+++.
T Consensus 266 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~----~~~~~~v~~ll~~~~~~ 315 (364)
T 3ljn_A 266 K-TDVFLIQACPYHNGTTVLPDRVVWLDFVPAAA----DPSKQEVLQLLQEKLDE 315 (364)
T ss_dssp H-SCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSC----CHHHHHHHHHHHHHHHH
T ss_pred c-CCchhhhcCcccCcccccccccccccchhhhh----ccCHHHHHHHHHHHHHH
Confidence 6 766533 56788999998888 66666666666666543
No 82
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.85 E-value=5.8e-21 Score=162.46 Aligned_cols=117 Identities=21% Similarity=0.226 Sum_probs=107.0
Q ss_pred CCCCcHHHHHHHcCC--------------ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCccc
Q 038344 35 SRKSSALHIASQKGK--------------CSATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSEL 100 (383)
Q Consensus 35 ~~g~TpLh~Aa~~g~--------------~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~ 100 (383)
.++.+|||.|+..|+ ++.+|.+|+||||+|+..|+.+++++|+++|++
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------ 64 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR------------------ 64 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC------------------
Confidence 467899999999998 567888999999999999999999999999887
Q ss_pred ccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhc
Q 038344 101 LNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRAR 180 (383)
Q Consensus 101 ~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~g 180 (383)
++.+|.+|+||||+|+..|+.++ +++|++. |++++..|.+|.||||+|+. .++.+++++|+++|
T Consensus 65 ~~~~~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~-g~~~~~~d~~g~t~L~~A~~----~~~~~~v~~Ll~~g 128 (179)
T 3f6q_A 65 INVMNRGDDTPLHLAASHGHRDI-----------VQKLLQY-KADINAVNEHGNVPLHYACF----WGQDQVAEDLVANG 128 (179)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHH-----------HHHHHHT-TCCTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHTT
T ss_pred CCCcCCCCCCHHHHHHHcCCHHH-----------HHHHHHc-CCCCCccCCCCCCHHHHHHH----cCCHHHHHHHHHCC
Confidence 89999999999999999999999 9999996 99999999999999999999 88899999999999
Q ss_pred CCCCC
Q 038344 181 GNSAK 185 (383)
Q Consensus 181 a~~~~ 185 (383)
+++..
T Consensus 129 a~~~~ 133 (179)
T 3f6q_A 129 ALVSI 133 (179)
T ss_dssp CCSSB
T ss_pred CCcch
Confidence 99754
No 83
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.85 E-value=7.6e-21 Score=157.44 Aligned_cols=114 Identities=28% Similarity=0.296 Sum_probs=105.6
Q ss_pred CCcHHHHHHHcCC------------ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCC
Q 038344 37 KSSALHIASQKGK------------CSATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNAN 104 (383)
Q Consensus 37 g~TpLh~Aa~~g~------------~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~ 104 (383)
+.||||.|+..|+ ....|.+|.||||+|+..|+.+++++|+++|++ ++.+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------~~~~ 63 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVS------------------RDAR 63 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCC------------------TTCC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------CCCC
Confidence 4689999999999 223578899999999999999999999998887 8899
Q ss_pred CCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCC
Q 038344 105 DDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSA 184 (383)
Q Consensus 105 d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~ 184 (383)
|.+|+||||+|+..|+.++ +++|++. |++++.+|.+|+||||+|+. .++.+++++|+++|+++.
T Consensus 64 ~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~-g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~ga~~~ 127 (153)
T 1awc_B 64 TKVDRTPLHMAASEGHANI-----------VEVLLKH-GADVNAKDMLKMTALHWATE----HNHQEVVELLIKYGADVH 127 (153)
T ss_dssp CTTCCCHHHHHHHHTCHHH-----------HHHHHTT-TCCTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHTTCCTT
T ss_pred CCCCCCHHHHHHHcChHHH-----------HHHHHHc-CCCCCCCCCCCCCHHHHHHH----cCCHHHHHHHHHcCCCcc
Confidence 9999999999999999999 9999996 99999999999999999999 888999999999999874
No 84
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.84 E-value=1e-20 Score=159.46 Aligned_cols=119 Identities=32% Similarity=0.463 Sum_probs=108.8
Q ss_pred cCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCc
Q 038344 32 KSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGS 98 (383)
Q Consensus 32 ~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~ 98 (383)
.....+.||||.|+..|+ ++.+|.+|.||||+|+..|+.+++++|+++|++
T Consensus 9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---------------- 72 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD---------------- 72 (169)
T ss_dssp ----CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----------------
T ss_pred cCCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----------------
Confidence 345667899999999999 567889999999999999999999999999887
Q ss_pred ccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHH
Q 038344 99 ELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRR 178 (383)
Q Consensus 99 ~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~ 178 (383)
++.+|.+|+||||+|+..|+.++ +++|++. |++++..|.+|.||||+|+. .++.+++++|++
T Consensus 73 --~~~~~~~g~t~L~~A~~~~~~~~-----------~~~Ll~~-g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~ 134 (169)
T 2y1l_E 73 --VNAVDHAGMTPLRLAALFGHLEI-----------VEVLLKN-GADVNANDMEGHTPLHLAAM----FGHLEIVEVLLK 134 (169)
T ss_dssp --TTCCCTTSCCHHHHHHHTTCHHH-----------HHHHHHT-TCCTTCCCTTSCCHHHHHHH----TTCHHHHHHHHH
T ss_pred --CCccCCCCCCHHHHHHHcCCHHH-----------HHHHHHc-CCCCCCCCCCCCCHHHHHHH----cCCHHHHHHHHH
Confidence 88999999999999999999999 9999996 99999999999999999999 889999999999
Q ss_pred hcCCCC
Q 038344 179 ARGNSA 184 (383)
Q Consensus 179 ~ga~~~ 184 (383)
+|++..
T Consensus 135 ~g~~~~ 140 (169)
T 2y1l_E 135 NGADVN 140 (169)
T ss_dssp TTCCTT
T ss_pred cCCCCC
Confidence 999874
No 85
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.84 E-value=1e-20 Score=161.63 Aligned_cols=106 Identities=25% Similarity=0.348 Sum_probs=93.6
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 038344 2 TILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGKCSATDVDGRNALHLAAMEGHIDVLEELVRAKP 81 (383)
Q Consensus 2 TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~ 81 (383)
||||.|+ ..|+.++++.|++ +.++ +.+|.+|+||||+|+..|+.+++++|+++|+
T Consensus 46 t~L~~A~---~~g~~~~v~~Ll~-~~~~---------------------~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga 100 (183)
T 3deo_A 46 TPWWTAA---RKADEQALSQLLE-DRDV---------------------DAVDENGRTALLFVAGLGSDKCVRLLAEAGA 100 (183)
T ss_dssp HHHHHHH---HTTCHHHHHHHTT-TSCT---------------------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CHHHHHH---HcCCHHHHHHHHh-cCCC---------------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 7899884 4899999999998 6554 3457788899999999999999999999988
Q ss_pred CCCchHHHHHhhccCCcccccCCC-CCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHH
Q 038344 82 DAASAPLKSFLETREGSELLNAND-DNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDIL 160 (383)
Q Consensus 82 ~~~~~~l~~l~~~~~~~~~~n~~d-~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A 160 (383)
+ +|.+| .+|+||||+|+..|+.++ +++|++. |++++.+|.+|+||||+|
T Consensus 101 ~------------------~~~~~~~~g~tpL~~A~~~~~~~~-----------v~~Ll~~-ga~~~~~d~~g~tpl~~A 150 (183)
T 3deo_A 101 D------------------LDHRDMRGGLTALHMAAGYVRPEV-----------VEALVEL-GADIEVEDERGLTALELA 150 (183)
T ss_dssp C------------------TTCCCSSSSCCHHHHHHHTTCHHH-----------HHHHHHH-TCCTTCCCTTSCCHHHHH
T ss_pred C------------------CCcCCCCCCCCHHHHHHhcCcHHH-----------HHHHHHc-CCCCcCCCCCCCCHHHHH
Confidence 7 78888 889999999999999999 9999996 999999999999999999
Q ss_pred Hh
Q 038344 161 AQ 162 (383)
Q Consensus 161 ~~ 162 (383)
+.
T Consensus 151 ~~ 152 (183)
T 3deo_A 151 RE 152 (183)
T ss_dssp HH
T ss_pred HH
Confidence 87
No 86
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.84 E-value=8.9e-21 Score=158.25 Aligned_cols=111 Identities=26% Similarity=0.358 Sum_probs=101.2
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHc
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAME 67 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~ 67 (383)
+||||+| +. |+.+++++|++.++++ +..|..|+||||+|+..|+ ++.+|.+|+||||+|++.
T Consensus 39 ~t~L~~A---~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 113 (162)
T 1ihb_A 39 RTALQVM---KL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKE 113 (162)
T ss_dssp CCHHHHC---CS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred ccHHHHH---Hc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 5899998 44 9999999999999998 8889999999999999998 677899999999999999
Q ss_pred CCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhccccc
Q 038344 68 GHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIE 145 (383)
Q Consensus 68 g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d 145 (383)
|+.+++++|+++|++ .++.+|..|+||||+|+..|+.++ +++|++. |+|
T Consensus 114 ~~~~~v~~Ll~~g~~-----------------~~~~~~~~g~t~l~~A~~~~~~~~-----------~~~Ll~~-GAd 162 (162)
T 1ihb_A 114 GHLRVVEFLVKHTAS-----------------NVGHRNHKGDTACDLARLYGRNEV-----------VSLMQAN-GAG 162 (162)
T ss_dssp TCHHHHHHHHHHSCC-----------------CTTCCCTTSCCHHHHHHHTTCHHH-----------HHHHHHT-C--
T ss_pred CCHHHHHHHHHccCC-----------------CCCCcCCCCCcHHHHHHHcCCHHH-----------HHHHHHh-CCC
Confidence 999999999999887 268899999999999999999999 9999996 875
No 87
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=2.8e-20 Score=169.83 Aligned_cols=130 Identities=22% Similarity=0.223 Sum_probs=113.2
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCCccccCCCCCcHHHHHHHc---CCHHHHHHHHH
Q 038344 2 TILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGKCSATDVDGRNALHLAAME---GHIDVLEELVR 78 (383)
Q Consensus 2 TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~~d~~G~tpLh~A~~~---g~~~iv~~Ll~ 78 (383)
++|+.| +..|+.+.++.+++.|+++..... ++..|..|+||||+|+.. |+.+++++|++
T Consensus 132 ~~l~~a---~~~~d~~~~~~ll~~g~~~~~~~~---------------l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~ 193 (278)
T 1dcq_A 132 HSLCEA---VKTRDIFGLLQAYADGVDLTEKIP---------------LANGHEPDETALHLAVRSVDRTSLHIVDFLVQ 193 (278)
T ss_dssp HHHHHH---HHTTCHHHHHHHHHTTCCTTSBCC---------------CSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHH
T ss_pred hhhhhH---hhhcccHHHHHHHHhhcchhhhcc---------------ccccccCCCCcchHHHHhcccchHHHHHHHHH
Confidence 356666 558999999999999887632210 233467899999999998 89999999999
Q ss_pred cCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHH
Q 038344 79 AKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWD 158 (383)
Q Consensus 79 ~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~ 158 (383)
+|++ +|.+|.+|+||||+|+..|+.++ +++|++. |+|++.+|.+|.||||
T Consensus 194 ~ga~------------------in~~d~~g~TpLh~A~~~g~~~~-----------v~~Ll~~-gad~~~~d~~g~tpL~ 243 (278)
T 1dcq_A 194 NSGN------------------LDKQTGKGSTALHYCCLTDNAEC-----------LKLLLRG-KASIEIANESGETPLD 243 (278)
T ss_dssp HCSC------------------TTCCCTTCCCHHHHHHHTTCHHH-----------HHHHHHT-TCCTTCCCTTSCCHHH
T ss_pred CCCC------------------ccccCCCCCCHHHHHHHcCCHHH-----------HHHHHHc-CCCCCCccCCCCCHHH
Confidence 9988 89999999999999999999999 9999995 9999999999999999
Q ss_pred HHHhccCCcchhhHHHHHHHhcCCC
Q 038344 159 ILAQSKRDIKYWEIGELLRRARGNS 183 (383)
Q Consensus 159 ~A~~~~~~~~~~~i~~~L~~~ga~~ 183 (383)
+|+. .++.+++++|+++|++.
T Consensus 244 ~A~~----~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 244 IAKR----LKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHH----TTCHHHHHHHHHHHTTC
T ss_pred HHHH----cCCHHHHHHHHHcCCCC
Confidence 9999 88999999999999976
No 88
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.83 E-value=1.3e-20 Score=168.65 Aligned_cols=127 Identities=22% Similarity=0.276 Sum_probs=100.1
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 038344 2 TILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGKCSATDVDGRNALHLAAMEGHIDVLEELVRAKP 81 (383)
Q Consensus 2 TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~ 81 (383)
||||+|+ ..|+.++++.|++ +.++ +.+|.+|+||||+|+..|+.+++++|+++|+
T Consensus 47 t~L~~A~---~~g~~~~v~~Ll~-~~~~---------------------~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga 101 (244)
T 3ui2_A 47 TPWWTAA---RKADEQALSQLLE-DRDV---------------------DAVDENGRTALLFVAGLGSDKCVRLLAEAGA 101 (244)
T ss_dssp HHHHHHH---TTTCHHHHHHTTT-TCCT---------------------TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CHHHHHH---HcCCHHHHHHHHc-CCCC---------------------CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 7888884 4888888888888 6554 3456678888888888888888888888887
Q ss_pred CCCchHHHHHhhccCCcccccCCC-CCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHH
Q 038344 82 DAASAPLKSFLETREGSELLNAND-DNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDIL 160 (383)
Q Consensus 82 ~~~~~~l~~l~~~~~~~~~~n~~d-~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A 160 (383)
+ +|.+| .+|+||||+|+..|+.++ +++|++. |++++.+|..|+||||+|
T Consensus 102 ~------------------~~~~~~~~g~t~L~~A~~~g~~~~-----------v~~Ll~~-ga~~~~~d~~g~t~l~~A 151 (244)
T 3ui2_A 102 D------------------LDHRDMRGGLTALHMAAGYVRPEV-----------VEALVEL-GADIEVEDERGLTALELA 151 (244)
T ss_dssp C------------------TTCCCSSSCCCHHHHHHHTTCHHH-----------HHHHHHT-TCCTTCCCTTCCCHHHHH
T ss_pred C------------------CCcCCCCCCCCHHHHHHHcCCHHH-----------HHHHHHC-CCCCCCCCCCCCcHHHHH
Confidence 7 77777 778888888888888888 8888886 888888888888888888
Q ss_pred HhccC------------CcchhhHHHHHHHhcCCC
Q 038344 161 AQSKR------------DIKYWEIGELLRRARGNS 183 (383)
Q Consensus 161 ~~~~~------------~~~~~~i~~~L~~~ga~~ 183 (383)
+.... ..++.+++++|.+++.+.
T Consensus 152 ~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~~ 186 (244)
T 3ui2_A 152 REILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEY 186 (244)
T ss_dssp HHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred HHHHhccCCCCHHHHHHHcChHHHHHHHHHhcccc
Confidence 74211 156788999999887654
No 89
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.83 E-value=4.1e-21 Score=171.41 Aligned_cols=127 Identities=21% Similarity=0.226 Sum_probs=112.6
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------ccccCCCCCcHHHHHHHcC
Q 038344 2 TILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------CSATDVDGRNALHLAAMEG 68 (383)
Q Consensus 2 TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------~~~~d~~G~tpLh~A~~~g 68 (383)
||||.|+ ..|+.++++.|++.++++ +..|.+|+||||+|+..|+ ++.+|.+|+||||+|+..|
T Consensus 39 t~L~~A~---~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~ 114 (239)
T 1ycs_B 39 ALLLDSS---LEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCN 114 (239)
T ss_dssp HHHHHHH---HHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHH---HcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 7899995 499999999999999987 8889999999999999999 6788999999999999999
Q ss_pred CHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCC-cHHHHH--HHcCChhHHHHhhhchhhHHHHhhhccccc
Q 038344 69 HIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGM-TILHLA--VADKQIEIWITHITYKSRAIKFFTTSTAIE 145 (383)
Q Consensus 69 ~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~-TpLh~A--~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d 145 (383)
+.+++++|+++|++ ++.+|..|. ||||+| +..|+.++ +++|++. |++
T Consensus 115 ~~~~v~~Ll~~ga~------------------~~~~~~~~~~t~l~~a~~~~~g~~~~-----------~~~Ll~~-~a~ 164 (239)
T 1ycs_B 115 NVQVCKFLVESGAA------------------VFAMTYSDMQTAADKCEEMEEGYTQC-----------SQFLYGV-QEK 164 (239)
T ss_dssp CHHHHHHHHHTTCC------------------TTCCCSSSCCCHHHHCCSSSTTCCCH-----------HHHHHHH-HHH
T ss_pred CHHHHHHHHHcCCC------------------cceecCCCCcchHHHHHHhhhccHHH-----------HHHHHHh-hhc
Confidence 99999999999988 888888877 999999 78899999 9999996 888
Q ss_pred cccccc---------CCCCHHHHHHh
Q 038344 146 VNAVNA---------NGFTAWDILAQ 162 (383)
Q Consensus 146 ~~~~n~---------~G~TpL~~A~~ 162 (383)
++..|. .+.++++++..
T Consensus 165 ~~~~~~~~~~al~d~~~~~~~eLa~~ 190 (239)
T 1ycs_B 165 MGIMNKGVIYALWDYEPQNDDELPMK 190 (239)
T ss_dssp TTTTGGGEEEESSCBCCSSTTBCCBC
T ss_pred ccccccceEEEEeccCCCCCCccccc
Confidence 887644 46666665544
No 90
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.82 E-value=5.4e-20 Score=152.58 Aligned_cols=112 Identities=20% Similarity=0.244 Sum_probs=103.8
Q ss_pred CCcHHHHHHHcCC--------------ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCccccc
Q 038344 37 KSSALHIASQKGK--------------CSATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLN 102 (383)
Q Consensus 37 g~TpLh~Aa~~g~--------------~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n 102 (383)
|.||||.|+..|+ ++..|.+|+||||+ +..|+.+++++|+++|++ ++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~------------------~~ 62 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGAS------------------PN 62 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC------------------TT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC------------------CC
Confidence 5699999999998 45678899999999 999999999999999887 89
Q ss_pred CCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCC
Q 038344 103 ANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGN 182 (383)
Q Consensus 103 ~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~ 182 (383)
.+|.+|+||||+|+..|+.++ +++|++. |++++.+|.+|+||||+|+. .++.+++++|+++ ++
T Consensus 63 ~~~~~g~t~L~~A~~~~~~~~-----------v~~Ll~~-g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~-~~ 125 (156)
T 1bd8_A 63 VQDTSGTSPVHDAARTGFLDT-----------LKVLVEH-GADVNVPDGTGALPIHLAVQ----EGHTAVVSFLAAE-SD 125 (156)
T ss_dssp CCCTTSCCHHHHHHHTTCHHH-----------HHHHHHT-TCCSCCCCTTSCCHHHHHHH----HTCHHHHHHHHTT-SC
T ss_pred CcCCCCCCHHHHHHHcCcHHH-----------HHHHHHc-CCCCCCcCCCCCcHHHHHHH----hChHHHHHHHHhc-cC
Confidence 999999999999999999999 9999996 99999999999999999999 8889999999998 66
Q ss_pred CC
Q 038344 183 SA 184 (383)
Q Consensus 183 ~~ 184 (383)
..
T Consensus 126 ~~ 127 (156)
T 1bd8_A 126 LH 127 (156)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 91
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.82 E-value=6.1e-20 Score=181.29 Aligned_cols=131 Identities=23% Similarity=0.218 Sum_probs=111.4
Q ss_pred hHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCCccccCCCCCcHHHHHHH---cCCHHHHHHHHHc
Q 038344 3 ILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGKCSATDVDGRNALHLAAM---EGHIDVLEELVRA 79 (383)
Q Consensus 3 pLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~~d~~G~tpLh~A~~---~g~~~iv~~Ll~~ 79 (383)
.||.| +..|+.+.++.|++.|+++ +.... ....|.+|+||||+|++ .|+.+++++|+++
T Consensus 135 ~L~~A---~~~g~~~~v~~ll~~g~~~-n~~~~--------------~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ 196 (497)
T 3lvq_E 135 RLWTA---ICNRDLLSVLEAFANGQDF-GQPLP--------------GPDAQAPEELVLHLAVKVANQASLPLVDFIIQN 196 (497)
T ss_dssp HHHHH---HHHTCHHHHHHHHHTTCCS-SSCBC--------------CSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH
T ss_pred HHHHH---HhccCHHHHHHHHhhcccc-cCCCC--------------CcccccccchHHHHHHHhcccccHHHHHHHHHc
Confidence 47777 4589999999999999887 33211 01236788999999966 8999999999999
Q ss_pred CCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHH
Q 038344 80 KPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDI 159 (383)
Q Consensus 80 ~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~ 159 (383)
|++ +|.+|.+|+||||+|+..|+.++ +++|++. |+|+|.+|.+|.||||+
T Consensus 197 ga~------------------vn~~d~~g~TpLh~A~~~g~~~~-----------v~~Ll~~-ga~~~~~d~~g~tpl~~ 246 (497)
T 3lvq_E 197 GGH------------------LDAKAADGNTALHYAALYNQPDC-----------LKLLLKG-RALVGTVNEAGETALDI 246 (497)
T ss_dssp SCC------------------TTCCCSSSCCHHHHHTTTTCHHH-----------HHHHHHT-CCCCSCCCTTCCCHHHH
T ss_pred CCC------------------CCccCCCCCcHHHHHHHcCCHHH-----------HHHHHHc-CCCCCCcCCCCCCHHHH
Confidence 988 89999999999999999999999 9999996 99999999999999999
Q ss_pred HHhccCCcchhhHHHHHHHhcCCCCC
Q 038344 160 LAQSKRDIKYWEIGELLRRARGNSAK 185 (383)
Q Consensus 160 A~~~~~~~~~~~i~~~L~~~ga~~~~ 185 (383)
|+. .++.+++++|+++|+++..
T Consensus 247 A~~----~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 247 ARK----KHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp HHH----TTCHHHHHHHHHTCC----
T ss_pred HHH----cCCHHHHHHHHHhCCCCCC
Confidence 999 8899999999999999854
No 92
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.82 E-value=6.3e-20 Score=169.44 Aligned_cols=136 Identities=24% Similarity=0.228 Sum_probs=109.6
Q ss_pred hHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCCccccCCCCCcHHHHHHHc---CCHHHHHHHHHc
Q 038344 3 ILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGKCSATDVDGRNALHLAAME---GHIDVLEELVRA 79 (383)
Q Consensus 3 pLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~~d~~G~tpLh~A~~~---g~~~iv~~Ll~~ 79 (383)
+||.| +..|+.+.++.|++.++++ +.... ....|.+|+||||+|+.. |+.+++++|+++
T Consensus 154 ~L~~A---~~~g~~~~v~~ll~~g~d~-~~~~~--------------~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~ 215 (301)
T 2b0o_E 154 RLWTA---ICNRDLLSVLEAFANGQDF-GQPLP--------------GPDAQAPEELVLHLAVKVANQASLPLVDFIIQN 215 (301)
T ss_dssp HHHHH---HHTTCHHHHHHHHHTTCCT-TSCEE--------------CSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHH
T ss_pred HHhhh---hhccCHHHHHHHHhcCCcc-cccCC--------------CcccCCCCccHHHHHHHhcccCcHHHHHHHHhc
Confidence 46666 3477777777777777665 22100 001466788888888886 899999999999
Q ss_pred CCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHH
Q 038344 80 KPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDI 159 (383)
Q Consensus 80 ~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~ 159 (383)
|++ +|.+|.+|+||||+|+..|+.++ +++|++. |+|++.+|.+|.||||+
T Consensus 216 gad------------------vn~~d~~G~TpLh~A~~~g~~~~-----------v~~Ll~~-gad~~~~d~~G~TpL~~ 265 (301)
T 2b0o_E 216 GGH------------------LDAKAADGNTALHYAALYNQPDC-----------LKLLLKG-RALVGTVNEAGETALDI 265 (301)
T ss_dssp SSC------------------TTCCCTTCCCHHHHHHHTTCHHH-----------HHHHHHT-TCCCSCCCTTSCCHHHH
T ss_pred CCC------------------CCCCCCCCCCHHHHHHHcCCHHH-----------HHHHHHc-CCCCCCcCCCCCCHHHH
Confidence 888 89999999999999999999999 9999996 99999999999999999
Q ss_pred HHhccCCcchhhHHHHHHHhcCCC-CCCCCCc
Q 038344 160 LAQSKRDIKYWEIGELLRRARGNS-AKDMHLP 190 (383)
Q Consensus 160 A~~~~~~~~~~~i~~~L~~~ga~~-~~~l~~~ 190 (383)
|+. .++.+++++|+++|++. ..+++++
T Consensus 266 A~~----~~~~~iv~~Ll~~ga~~g~tpLh~A 293 (301)
T 2b0o_E 266 ARK----KHHKECEELLEQAQAGTFAFPLHVD 293 (301)
T ss_dssp HHH----HTCHHHHHHHHHHHHHTTSSCCC--
T ss_pred HHH----cCCHHHHHHHHHhcCCCCCChhHHH
Confidence 999 88899999999999875 2344443
No 93
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.81 E-value=1.6e-19 Score=170.93 Aligned_cols=126 Identities=18% Similarity=0.167 Sum_probs=111.3
Q ss_pred ChHHHHHHHHHc-CCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 038344 2 TILQLAVAAALL-GHEDFVNEILCQKPELARKSDSRKSSALHIASQKGKCSATDVDGRNALHLAAMEGHIDVLEELVRAK 80 (383)
Q Consensus 2 TpLh~A~~Aa~~-g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~ 80 (383)
|+||.| +.. |+.++++.|++.|+++ +..| .+.+|.||||+|+..|+.+++++|+++|
T Consensus 201 t~L~~A---a~~~g~~~~v~~LL~~Gadv-n~~~------------------~~~~g~TpLh~Aa~~g~~~iv~~LL~~G 258 (368)
T 3jue_A 201 ALLFRA---SGHPPSLPTMADALAHGADV-NWVN------------------GGQDNATPLIQATAANSLLACEFLLQNG 258 (368)
T ss_dssp HHHHHH---TSSSCCHHHHHHHHHTTCCT-TCCC------------------TTTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred cHHHHH---HHccCCHHHHHHHHHcCCCC-Cccc------------------cccCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 578888 447 9999999999999887 3322 1267899999999999999999999998
Q ss_pred CCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHH
Q 038344 81 PDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDIL 160 (383)
Q Consensus 81 ~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A 160 (383)
++ +|.+|.+|+||||+|+..|+.++ +++|++. |++++..|.+|.||||+|
T Consensus 259 ad------------------vn~~d~~G~TpLh~A~~~g~~~~-----------v~~LL~~-Gad~~~~d~~G~TpL~~A 308 (368)
T 3jue_A 259 AN------------------VNQADSAGRGPLHHATILGHTGL-----------ACLFLKR-GADLGARDSEGRDPLTIA 308 (368)
T ss_dssp CC------------------TTCCCTTSCCHHHHHHHHTCHHH-----------HHHHHHT-TCCTTCCCTTSCCHHHHH
T ss_pred CC------------------CCCCCCCCCCHHHHHHHcCcHHH-----------HHHHHHC-cCCCCCcCCCCCCHHHHH
Confidence 88 89999999999999999999999 9999996 999999999999999999
Q ss_pred HhccCCcchhhHHHHHHHhcCCC
Q 038344 161 AQSKRDIKYWEIGELLRRARGNS 183 (383)
Q Consensus 161 ~~~~~~~~~~~i~~~L~~~ga~~ 183 (383)
+. .++.+++++|+++|...
T Consensus 309 ~~----~g~~~iv~lLl~~~~~~ 327 (368)
T 3jue_A 309 ME----TANADIVTLLRLAKMRE 327 (368)
T ss_dssp HH----TTCHHHHHHHHHHHC--
T ss_pred HH----CCCHHHHHHHHHcCCCc
Confidence 99 88999999999998654
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.80 E-value=5.8e-19 Score=143.19 Aligned_cols=100 Identities=23% Similarity=0.280 Sum_probs=94.2
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhch
Q 038344 52 ATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYK 131 (383)
Q Consensus 52 ~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~ 131 (383)
.+|.+|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.++
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------------~~~~~~~g~t~L~~A~~~~~~~~-------- 58 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSD------------------PNVKDHAGWTPLHEACNHGHLKV-------- 58 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC------------------SCCCCTTSCCHHHHHHHTTCHHH--------
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------CCcCCCCCCCHHHHHHHcCCHHH--------
Confidence 4688999999999999999999999999887 88999999999999999999999
Q ss_pred hhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCCC
Q 038344 132 SRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSAK 185 (383)
Q Consensus 132 ~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 185 (383)
+++|++. |++++.+|..|+||||+|+. .++.+++++|+++|+++..
T Consensus 59 ---~~~Ll~~-g~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~ga~~~~ 104 (137)
T 3c5r_A 59 ---VELLLQH-KALVNTTGYQNDSPLHDAAK----NGHVDIVKLLLSYGASRNA 104 (137)
T ss_dssp ---HHHHHHT-TCCTTCCCGGGCCHHHHHHH----TTCHHHHHHHHHTTCCTTC
T ss_pred ---HHHHHHc-CCcccCcCCCCCCHHHHHHH----cCCHHHHHHHHHcCCCCCC
Confidence 9999996 99999999999999999999 8889999999999998743
No 95
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.79 E-value=6.3e-19 Score=133.12 Aligned_cols=91 Identities=38% Similarity=0.576 Sum_probs=82.0
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGKCSATDVDGRNALHLAAMEGHIDVLEELVRAK 80 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~ 80 (383)
+||||+|+. .|+.+++++|++.++++ + .+|.+|+||||+|+..|+.+++++|+++|
T Consensus 3 ~t~L~~A~~---~~~~~~v~~Ll~~g~~~-n--------------------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g 58 (93)
T 1n0q_A 3 RTPLHLAAR---NGHLEVVKLLLEAGADV-N--------------------AKDKNGRTPLHLAARNGHLEVVKLLLEAG 58 (93)
T ss_dssp CCHHHHHHH---HTCHHHHHHHHHTTCCT-T--------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CcHHHHHHH---cCCHHHHHHHHHcCCCC-c--------------------ccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 699999954 99999999999999877 3 45677889999999999999999999998
Q ss_pred CCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhccccc
Q 038344 81 PDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIE 145 (383)
Q Consensus 81 ~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d 145 (383)
++ ++.+|.+|+||||+|+..|+.++ +++|++. |++
T Consensus 59 a~------------------~~~~d~~g~t~l~~A~~~~~~~~-----------~~~Ll~~-ga~ 93 (93)
T 1n0q_A 59 AD------------------VNAKDKNGRTPLHLAARNGHLEV-----------VKLLLEA-GAY 93 (93)
T ss_dssp CC------------------TTCCCTTSCCHHHHHHHTTCHHH-----------HHHHHHT-TCC
T ss_pred CC------------------CCccCCCCCCHHHHHHHcCCHHH-----------HHHHHHc-CCC
Confidence 88 89999999999999999999999 9999986 764
No 96
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.79 E-value=5.6e-20 Score=157.63 Aligned_cols=116 Identities=11% Similarity=0.041 Sum_probs=100.5
Q ss_pred CChHHHHHHHHHcCCH----HHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------------------ccccCCCC
Q 038344 1 MTILQLAVAAALLGHE----DFVNEILCQKPELARKSDSRKSSALHIASQKGK-------------------CSATDVDG 57 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~----~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------------------~~~~d~~G 57 (383)
+||||+|+ ..|+. +++++|+++|+++ +.+|.+|+||||+|+..|+ ++.+|.+|
T Consensus 39 ~T~Lh~A~---~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g 114 (186)
T 3t8k_A 39 SNILYDVL---RNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPY 114 (186)
T ss_dssp TTHHHHHT---TCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGG
T ss_pred CCHHHHHH---HcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCc
Confidence 59999995 47775 5999999999998 8899999999999998875 67889999
Q ss_pred C-cHHHHHHHcC-----CHHHHHHHHH-cCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhc
Q 038344 58 R-NALHLAAMEG-----HIDVLEELVR-AKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITY 130 (383)
Q Consensus 58 ~-tpLh~A~~~g-----~~~iv~~Ll~-~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~ 130 (383)
+ ||||+|+..+ +.+++++|++ +|++ +|.+|.+|+||||+|+..|+.++
T Consensus 115 ~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad------------------~~~~d~~G~TpL~~A~~~~~~~~------- 169 (186)
T 3t8k_A 115 KIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ------------------LLIKDKWGLTALEFVKRCQKPIA------- 169 (186)
T ss_dssp TBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC------------------TTCCCTTSCCHHHHHHTTTCHHH-------
T ss_pred CchHHHHHHHcCCChhhHHHHHHHHHHhcCCC------------------CcccCCCCCCHHHHHHHcCCHHH-------
Confidence 9 9999999944 4679999999 8888 89999999999999999999999
Q ss_pred hhhHHHHhhhcccccccccc
Q 038344 131 KSRAIKFFTTSTAIEVNAVN 150 (383)
Q Consensus 131 ~~~~v~~Ll~~~g~d~~~~n 150 (383)
+++|.+. ..+.+.++
T Consensus 170 ----v~~L~~~-~~~~~~~~ 184 (186)
T 3t8k_A 170 ----LKMMEDY-IKKYNLKE 184 (186)
T ss_dssp ----HHHHHHH-HHHHTCCC
T ss_pred ----HHHHHHH-HHHHhccc
Confidence 8888774 55555544
No 97
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.79 E-value=2.3e-21 Score=184.13 Aligned_cols=137 Identities=16% Similarity=0.155 Sum_probs=106.7
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHhcCCcc--cccCCCCCCcHHHHHHHcCC-----------c-----cccCCCCCcHHHH
Q 038344 2 TILQLAVAAALLGHEDFVNEILCQKPEL--ARKSDSRKSSALHIASQKGK-----------C-----SATDVDGRNALHL 63 (383)
Q Consensus 2 TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~--~~~~d~~g~TpLh~Aa~~g~-----------~-----~~~d~~G~tpLh~ 63 (383)
||||+| |..|+.+++++|++.++.. .+..|..|.||||+|+..|+ . +..+.+ .||||+
T Consensus 94 T~Lh~A---a~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~ 169 (376)
T 2aja_A 94 VICFVA---AITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRL 169 (376)
T ss_dssp HHHHHH---HHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHH
T ss_pred CHHHHH---HHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHH
Confidence 789998 4589999999999887622 12335567889999999998 1 122223 789999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccC--CCCCCCcHHHHHH-HcCChhHHHHhhhchhhHHHHhhh
Q 038344 64 AAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNA--NDDNGMTILHLAV-ADKQIEIWITHITYKSRAIKFFTT 140 (383)
Q Consensus 64 A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~--~d~~g~TpLh~A~-~~~~~~~~~~~l~~~~~~v~~Ll~ 140 (383)
|+.+|+.+++++|+++|++ ++. +|.+|+||||+|+ .+|+.++ +++|++
T Consensus 170 Aa~~G~~eiv~~Ll~~ga~------------------~~~~~~d~~g~TpL~~Aa~~~G~~ei-----------v~~Ll~ 220 (376)
T 2aja_A 170 AAENGHLHVLNRLCELAPT------------------EATAMIQAENYYAFRWAAVGRGHHNV-----------INFLLD 220 (376)
T ss_dssp HHHTTCHHHHHHHHHSCGG------------------GHHHHHHHHHHHHHHHHHSTTCCHHH-----------HHHHTT
T ss_pred HHHCCCHHHHHHHHHcCCc------------------cchhccCCCCCCHHHHHHHHCCCHHH-----------HHHHHh
Confidence 9999999999999998876 555 7788899999999 9999999 999988
Q ss_pred cccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCC
Q 038344 141 STAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNS 183 (383)
Q Consensus 141 ~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~ 183 (383)
. |.+ |.||||+|+. .++.+++++|+++|++.
T Consensus 221 ~-ga~-------~~taL~~Aa~----~g~~evv~lL~~~ga~~ 251 (376)
T 2aja_A 221 C-PVM-------LAYAEIHEFE----YGEKYVNPFIARHVNRL 251 (376)
T ss_dssp S-HHH-------HHHHHHCTTT----TTTTTHHHHHHHHHHHH
T ss_pred C-CCc-------cchHHHHHHH----CCCHHHHHHHHhcCccc
Confidence 4 642 7899999988 78888999999988765
No 98
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.79 E-value=1.7e-19 Score=141.80 Aligned_cols=99 Identities=30% Similarity=0.398 Sum_probs=94.1
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhch
Q 038344 52 ATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYK 131 (383)
Q Consensus 52 ~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~ 131 (383)
.+|.+|+||||+|+..|+.+++++|++++++ ++.+|..|+||||+|+..++.++
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------------~~~~d~~g~t~L~~A~~~~~~~~-------- 57 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD------------------VNARSKDGNTPLHLAAKNGHAEI-------- 57 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC------------------SSCCCSSSCCTTHHHHTTTCHHH--------
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------CCCcCCCCCCHHHHHHHcCcHHH--------
Confidence 4789999999999999999999999998887 89999999999999999999999
Q ss_pred hhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCC
Q 038344 132 SRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSA 184 (383)
Q Consensus 132 ~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~ 184 (383)
+++|++. |++++.+|.+|.||||+|+. .++.+++++|+++|++++
T Consensus 58 ---~~~Ll~~-g~~~~~~d~~g~tpl~~A~~----~~~~~~~~~Ll~~ga~~n 102 (115)
T 2l6b_A 58 ---VKLLLAK-GADVNARSKDGNTPEHLAKK----NGHHEIVKLLDAKGADVN 102 (115)
T ss_dssp ---HHHHTTT-TCCTTCCCTTCCCTTHHHHT----TTCHHHHHHHHTTSSSHH
T ss_pred ---HHHHHHc-CCCCcccCCCCCCHHHHHHH----CCCHHHHHHHHHcCCCCC
Confidence 9999996 99999999999999999999 788999999999999974
No 99
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.78 E-value=1.3e-18 Score=138.47 Aligned_cols=97 Identities=20% Similarity=0.207 Sum_probs=89.9
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhh
Q 038344 54 DVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSR 133 (383)
Q Consensus 54 d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~ 133 (383)
+..|.||||.|+..|+.+++++|++.+++ +|.+|.+|+||||+|+..|+.++
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~------------------~~~~~~~g~t~L~~A~~~~~~~~---------- 55 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGED------------------VNRTLEGGRKPLHYAADCGQLEI---------- 55 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCC------------------TTSCCTTSSCHHHHHHHTTCHHH----------
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCC------------------cCccCCCCCcHHHHHHHcCCHHH----------
Confidence 56789999999999999999999999887 89999999999999999999999
Q ss_pred HHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCC
Q 038344 134 AIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSA 184 (383)
Q Consensus 134 ~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~ 184 (383)
+++|++. |++++.+|.+|+||||+|+. .++.+++++|+++|+++.
T Consensus 56 -v~~Ll~~-g~~~~~~d~~g~tpL~~A~~----~~~~~~v~~Ll~~ga~~~ 100 (123)
T 3aaa_C 56 -LEFLLLK-GADINAPDKHHITPLLSAVY----EGHVSCVKLLLSKGADKT 100 (123)
T ss_dssp -HHHHHTT-TCCTTCCCTTSCCHHHHHHH----HTCHHHHHHHHHTTCCTT
T ss_pred -HHHHHHc-CCCCCcCCCCCCCHHHHHHH----cCCHHHHHHHHHcCCCCC
Confidence 9999996 99999999999999999999 888999999999999874
No 100
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.77 E-value=6.1e-19 Score=143.01 Aligned_cols=100 Identities=16% Similarity=0.165 Sum_probs=94.2
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhh
Q 038344 50 CSATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHIT 129 (383)
Q Consensus 50 ~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~ 129 (383)
++.+|.+|.||||+|+..|+.+++++|+++|++ +|.+|.+|+||||+|+. |+.++
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------~~~~~~~g~t~L~~A~~-~~~~~------ 59 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAGAD------------------PNALNRFGRRPIQVMMM-GSAQV------ 59 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC------------------TTCCCTTCCTTTTTSTT-SCHHH------
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC------------------cCCcCCCCCCHHHHHHc-CCHHH------
Confidence 467788999999999999999999999999887 89999999999999999 99999
Q ss_pred chhhHHHHhhhcccccccccccC-CCCHHHHHHhccCCcchhhHHHHHHHhcCCCC
Q 038344 130 YKSRAIKFFTTSTAIEVNAVNAN-GFTAWDILAQSKRDIKYWEIGELLRRARGNSA 184 (383)
Q Consensus 130 ~~~~~v~~Ll~~~g~d~~~~n~~-G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~ 184 (383)
+++|++. |++++.+|.. |.||||+|+. .++.+++++|+++|+++.
T Consensus 60 -----v~~Ll~~-g~~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~ga~~~ 105 (136)
T 1d9s_A 60 -----AELLLLH-GAEPNCADPATLTRPVHDAAR----EGFLDTLVVLHRAGARLD 105 (136)
T ss_dssp -----HHHHHHH-TCCSSCCBTTTTBCHHHHHHH----HTCHHHHHHHHHTCCCCC
T ss_pred -----HHHHHHC-CCCCCCcCCCCCCCHHHHHHH----cCCHHHHHHHHHcCCCCC
Confidence 9999996 9999999999 9999999999 888999999999999874
No 101
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.77 E-value=5.2e-19 Score=138.95 Aligned_cols=103 Identities=31% Similarity=0.430 Sum_probs=88.9
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGKCSATDVDGRNALHLAAMEGHIDVLEELVRAK 80 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~ 80 (383)
+||||+|+. .|+.++++.|++.++++ +.+|.+|.||||+|+..|+.+++++|+++|
T Consensus 10 ~t~L~~A~~---~~~~~~~~~Ll~~g~~~---------------------~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g 65 (115)
T 2l6b_A 10 NTPLHNAAK---NGHAEEVKKLLSKGADV---------------------NARSKDGNTPLHLAAKNGHAEIVKLLLAKG 65 (115)
T ss_dssp CCHHHHHHH---HTCHHHHHHHTTTTCCS---------------------SCCCSSSCCTTHHHHTTTCHHHHHHHTTTT
T ss_pred CCHHHHHHH---cCCHHHHHHHHHcCCCC---------------------CCcCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 488888854 78888888888887765 345677889999999999999999999998
Q ss_pred CCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHH
Q 038344 81 PDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAW 157 (383)
Q Consensus 81 ~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL 157 (383)
++ ++.+|.+|+||||+|+..++.++ +++|++. |+|+|..+..|.||-
T Consensus 66 ~~------------------~~~~d~~g~tpl~~A~~~~~~~~-----------~~~Ll~~-ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 66 AD------------------VNARSKDGNTPEHLAKKNGHHEI-----------VKLLDAK-GADVNARSWGSSHHH 112 (115)
T ss_dssp CC------------------TTCCCTTCCCTTHHHHTTTCHHH-----------HHHHHTT-SSSHHHHSCCCC---
T ss_pred CC------------------CcccCCCCCCHHHHHHHCCCHHH-----------HHHHHHc-CCCCCcCCccccccc
Confidence 87 89999999999999999999999 9999996 999999999999884
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.75 E-value=1.3e-18 Score=153.11 Aligned_cols=101 Identities=28% Similarity=0.274 Sum_probs=94.4
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhch
Q 038344 52 ATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYK 131 (383)
Q Consensus 52 ~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~ 131 (383)
..|.+|.||||+|+..|+.+++++|++.|++ +|.+|.+|+||||+|+..|+.++
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------------------~~~~~~~g~t~L~~A~~~~~~~~-------- 121 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDNRVG------------------VNGLDKAGSTALYWACHGGHKDI-------- 121 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHTTCC------------------TTCCCTTSCCHHHHHHHTTCHHH--------
T ss_pred ccccccccccccccccCcHHHHHHHHhCCCC------------------ccccCCCCCCHHHHHHHcCCHHH--------
Confidence 3566789999999999999999999998887 89999999999999999999999
Q ss_pred hhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCCC
Q 038344 132 SRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSAK 185 (383)
Q Consensus 132 ~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 185 (383)
+++|++..|++++.+|.+|+||||+|+. .++.+++++|+++|++...
T Consensus 122 ---v~~Ll~~~g~~~~~~d~~g~tpL~~A~~----~~~~~~v~~Ll~~ga~~~~ 168 (222)
T 3ehr_A 122 ---VEMLFTQPNIELNQQNKLGDTALHAAAW----KGYADIVQLLLAKGARTDL 168 (222)
T ss_dssp ---HHHHTTSTTCCCCCCCTTSCCHHHHHHH----HTCHHHHHHHHHHTCCSCC
T ss_pred ---HHHHHcCCCCCccccCCCCCCHHHHHHH----cCCHHHHHHHHHcCCCCcc
Confidence 9999996699999999999999999999 8899999999999999854
No 103
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.74 E-value=4.7e-18 Score=137.72 Aligned_cols=98 Identities=34% Similarity=0.409 Sum_probs=91.0
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchh
Q 038344 53 TDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKS 132 (383)
Q Consensus 53 ~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~ 132 (383)
....|.||||.|+..|+.+++++|+++|++ +|.+|.+|+||||+|+..|+.++
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~------------------~~~~~~~g~t~L~~A~~~~~~~~--------- 62 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGAD------------------VNAKDEYGLTPLYLATAHGHLEI--------- 62 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCC------------------TTCCCTTSCCHHHHHHHHTCHHH---------
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCC------------------CCCcCCCCCCHHHHHHHcCCHHH---------
Confidence 345688999999999999999999999887 89999999999999999999999
Q ss_pred hHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCC
Q 038344 133 RAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSA 184 (383)
Q Consensus 133 ~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~ 184 (383)
+++|++. |++++..|.+|.||||+|+. .++.+++++|+++|++..
T Consensus 63 --v~~Ll~~-g~~~~~~d~~g~t~L~~A~~----~~~~~~v~~Ll~~g~~~~ 107 (136)
T 2jab_A 63 --VEVLLKN-GADVNAVDAIGFTPLHLAAF----IGHLEIAEVLLKHGADVN 107 (136)
T ss_dssp --HHHHHHT-TCCTTCCCTTCCCHHHHHHH----HTCHHHHHHHHHTTCCTT
T ss_pred --HHHHHHc-CCCCCcCCCCCCCHHHHHHH----cCCHHHHHHHHHcCCCCc
Confidence 9999996 99999999999999999999 888999999999999874
No 104
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.74 E-value=5.6e-18 Score=150.08 Aligned_cols=115 Identities=22% Similarity=0.299 Sum_probs=95.4
Q ss_pred HHHHHhcCCcccccCCCCCCcHHHHHHHcCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCc
Q 038344 19 VNEILCQKPELARKSDSRKSSALHIASQKGKCSATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGS 98 (383)
Q Consensus 19 v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~ 98 (383)
++.|++++++. +..+ ..+.+|.||||.|+..|+.+++++|++.|++
T Consensus 1 v~~ll~~~~~~-~~~~-----------------~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~---------------- 46 (229)
T 2vge_A 1 MRSVLRKAGSP-RKAR-----------------RARLNPLVLLLDAALTGELEVVQQAVKEMND---------------- 46 (229)
T ss_dssp ---------CC-CCCC-----------------CTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC----------------
T ss_pred CeehhccCCCC-cccc-----------------ccccchhHHHHHHHHcCCHHHHHHHHhcCCC----------------
Confidence 35677777766 3322 2456678999999999999999999999887
Q ss_pred ccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHH
Q 038344 99 ELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRR 178 (383)
Q Consensus 99 ~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~ 178 (383)
+|.+|.+|+||||+|+..|+.++ +++|++. |+++|.+|.+|+||||+|+. .++.+++++|++
T Consensus 47 --~~~~d~~g~tpLh~A~~~g~~~~-----------v~~Ll~~-ga~~n~~d~~g~tpLh~A~~----~g~~~~v~~Ll~ 108 (229)
T 2vge_A 47 --PSQPNEEGITALHNAICGANYSI-----------VDFLITA-GANVNSPDSHGWTPLHCAAS----CNDTVICMALVQ 108 (229)
T ss_dssp --TTCCCTTSCCHHHHHHHTTCHHH-----------HHHHHHT-TCCTTCCCTTCCCHHHHHHH----TTCHHHHHHHHT
T ss_pred --CCCCCCCCCCHHHHHHHcCCHHH-----------HHHHHHC-CCCCCCCCCCCCCHHHHHHH----cCCHHHHHHHHH
Confidence 89999999999999999999999 9999996 99999999999999999999 889999999999
Q ss_pred hcCCCCC
Q 038344 179 ARGNSAK 185 (383)
Q Consensus 179 ~ga~~~~ 185 (383)
+|++...
T Consensus 109 ~ga~~~~ 115 (229)
T 2vge_A 109 HGAAIFA 115 (229)
T ss_dssp TTCCTTC
T ss_pred cCCCccc
Confidence 9998753
No 105
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.73 E-value=6.9e-18 Score=131.65 Aligned_cols=92 Identities=32% Similarity=0.377 Sum_probs=83.9
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhc
Q 038344 51 SATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITY 130 (383)
Q Consensus 51 ~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~ 130 (383)
...|.+|.||||+|+..|+.+++++|+++|++ +|.+|..|+||||+|+..|+.++
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------------------i~~~d~~g~tpLh~A~~~~~~~~------- 72 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGAD------------------VAAKDKNGSTPLHLAARNGHLEV------- 72 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCC------------------TTCCCTTCCCHHHHHHHTTCHHH-------
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCC------------------CCccCCCCCCHHHHHHHcCCHHH-------
Confidence 45688999999999999999999999999887 89999999999999999999999
Q ss_pred hhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHH
Q 038344 131 KSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELL 176 (383)
Q Consensus 131 ~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L 176 (383)
+++|++. |++++.+|..|+||||+|+. .++.+++++|
T Consensus 73 ----v~~Ll~~-ga~~~~~d~~g~tpl~~A~~----~~~~~~~~~L 109 (110)
T 2zgd_A 73 ----VKLLLEA-GADVXAQDKFGKTAFDISID----NGNEDLAEIL 109 (110)
T ss_dssp ----HHHHHHT-TCCTTCCCTTSCCHHHHHHH----HTCHHHHHHH
T ss_pred ----HHHHHHc-CCCccccccCCCcHHHHHHH----cCCHHHHHHh
Confidence 9999996 99999999999999999999 7888898876
No 106
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.73 E-value=2.4e-17 Score=130.83 Aligned_cols=95 Identities=38% Similarity=0.565 Sum_probs=90.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHH
Q 038344 56 DGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAI 135 (383)
Q Consensus 56 ~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v 135 (383)
+|+||||.|++.|+.+++++|++++++ ++.+|..|.||||+|+..++.++ +
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~------------------~~~~~~~g~t~L~~A~~~~~~~~-----------~ 51 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD------------------VNAKDKNGRTPLHLAARNGHLEV-----------V 51 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC------------------TTCCCTTSCCHHHHHHHHTCHHH-----------H
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC------------------CCCcCCCCCcHHHHHHHcCcHHH-----------H
Confidence 589999999999999999999999887 88899999999999999999999 9
Q ss_pred HHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCC
Q 038344 136 KFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSA 184 (383)
Q Consensus 136 ~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~ 184 (383)
++|++. |++++.+|..|.||||+|+. .++.+++++|+++|+++.
T Consensus 52 ~~Ll~~-g~~~~~~~~~g~t~l~~A~~----~~~~~~~~~Ll~~g~~~~ 95 (126)
T 1n0r_A 52 KLLLEA-GADVNAKDKNGRTPLHLAAR----NGHLEVVKLLLEAGADVN 95 (126)
T ss_dssp HHHHHT-TCCTTCCCTTSCCHHHHHHH----TTCHHHHHHHHHTTCCTT
T ss_pred HHHHHc-CCCCcccCCCCCcHHHHHHH----cChHHHHHHHHHcCCCCc
Confidence 999996 99999999999999999999 888999999999999874
No 107
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.71 E-value=8.7e-18 Score=155.06 Aligned_cols=105 Identities=23% Similarity=0.246 Sum_probs=86.8
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGKCSATDVDGRNALHLAAMEGHIDVLEELVRAK 80 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~ 80 (383)
+||||+|+..+..|+.+++++|++.|+++ +.+|.+|+||||+|+..|+.+++++|+++|
T Consensus 191 ~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv---------------------n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g 249 (301)
T 2b0o_E 191 ELVLHLAVKVANQASLPLVDFIIQNGGHL---------------------DAKAADGNTALHYAALYNQPDCLKLLLKGR 249 (301)
T ss_dssp ECHHHHHHHTCCTTTHHHHHHHHHHSSCT---------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred ccHHHHHHHhcccCcHHHHHHHHhcCCCC---------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 37888886522237888888888888776 345778899999999999999999999998
Q ss_pred CCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHH
Q 038344 81 PDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDIL 160 (383)
Q Consensus 81 ~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A 160 (383)
++ ++.+|.+|+||||+|+..|+.++ +++|++. |++ .|.||||+|
T Consensus 250 ad------------------~~~~d~~G~TpL~~A~~~~~~~i-----------v~~Ll~~-ga~------~g~tpLh~A 293 (301)
T 2b0o_E 250 AL------------------VGTVNEAGETALDIARKKHHKEC-----------EELLEQA-QAG------TFAFPLHVD 293 (301)
T ss_dssp CC------------------CSCCCTTSCCHHHHHHHHTCHHH-----------HHHHHHH-HHH------TTSSCCC--
T ss_pred CC------------------CCCcCCCCCCHHHHHHHcCCHHH-----------HHHHHHh-cCC------CCCChhHHH
Confidence 88 89999999999999999999999 9999986 765 689999999
Q ss_pred Hh
Q 038344 161 AQ 162 (383)
Q Consensus 161 ~~ 162 (383)
+.
T Consensus 294 ~~ 295 (301)
T 2b0o_E 294 YS 295 (301)
T ss_dssp --
T ss_pred Hh
Confidence 98
No 108
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.70 E-value=1.9e-17 Score=141.26 Aligned_cols=98 Identities=18% Similarity=0.207 Sum_probs=91.3
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchh
Q 038344 53 TDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKS 132 (383)
Q Consensus 53 ~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~ 132 (383)
.|.+|.||||.|+..|+.++++.|++ +.+ +|.+|.+|+||||+|+..|+.++
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~------------------~~~~d~~g~t~L~~A~~~~~~~~--------- 91 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRD------------------VDAVDENGRTALLFVAGLGSDKC--------- 91 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSC------------------TTCCCTTSCCHHHHHHHHTCHHH---------
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCC------------------CCCcCCCCCCHHHHHHHcCCHHH---------
Confidence 35679999999999999999999999 776 89999999999999999999999
Q ss_pred hHHHHhhhcccccccccc-cCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCCC
Q 038344 133 RAIKFFTTSTAIEVNAVN-ANGFTAWDILAQSKRDIKYWEIGELLRRARGNSAK 185 (383)
Q Consensus 133 ~~v~~Ll~~~g~d~~~~n-~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 185 (383)
+++|++. |+++|.+| .+|+||||+|+. .++.+++++|+++|+++..
T Consensus 92 --v~~Ll~~-ga~~~~~~~~~g~tpL~~A~~----~~~~~~v~~Ll~~ga~~~~ 138 (183)
T 3deo_A 92 --VRLLAEA-GADLDHRDMRGGLTALHMAAG----YVRPEVVEALVELGADIEV 138 (183)
T ss_dssp --HHHHHHT-TCCTTCCCSSSSCCHHHHHHH----TTCHHHHHHHHHHTCCTTC
T ss_pred --HHHHHHc-CCCCCcCCCCCCCCHHHHHHh----cCcHHHHHHHHHcCCCCcC
Confidence 9999996 99999998 899999999999 8899999999999999853
No 109
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.69 E-value=4.3e-18 Score=152.27 Aligned_cols=115 Identities=17% Similarity=0.200 Sum_probs=99.7
Q ss_pred CCCcHHHHHHHcCC----------ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCC
Q 038344 36 RKSSALHIASQKGK----------CSATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNAND 105 (383)
Q Consensus 36 ~g~TpLh~Aa~~g~----------~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d 105 (383)
.+.+++.+++..|+ ....+.+|.||||.|++.|+.++++.|++ +.+ +|.+|
T Consensus 14 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~------------------~~~~d 74 (244)
T 3ui2_A 14 EGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-DRD------------------VDAVD 74 (244)
T ss_dssp TTEEEEEEEESSCCCCEEEEGGGSCHHHHHHHHHHHHHHHTTTCHHHHHHTTT-TCC------------------TTCBC
T ss_pred CCccHHHHHHHcCCCcccccccccccccccCCCCHHHHHHHcCCHHHHHHHHc-CCC------------------CCCcC
Confidence 44555555555555 11234579999999999999999999999 776 89999
Q ss_pred CCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccc-cCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCC
Q 038344 106 DNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVN-ANGFTAWDILAQSKRDIKYWEIGELLRRARGNSA 184 (383)
Q Consensus 106 ~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n-~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~ 184 (383)
.+|+||||+|+..|+.++ +++|++. |+++|.+| ..|.||||+|+. .++.+++++|+++|++++
T Consensus 75 ~~g~t~L~~A~~~g~~~~-----------v~~Ll~~-ga~~~~~~~~~g~t~L~~A~~----~g~~~~v~~Ll~~ga~~~ 138 (244)
T 3ui2_A 75 ENGRTALLFVAGLGSDKC-----------VRLLAEA-GADLDHRDMRGGLTALHMAAG----YVRPEVVEALVELGADIE 138 (244)
T ss_dssp TTSCBHHHHHHHHTCHHH-----------HHHHHHT-TCCTTCCCSSSCCCHHHHHHH----TTCHHHHHHHHHTTCCTT
T ss_pred CCCCCHHHHHHHCCCHHH-----------HHHHHHc-CCCCCcCCCCCCCCHHHHHHH----cCCHHHHHHHHHCCCCCC
Confidence 999999999999999999 9999996 99999998 889999999999 889999999999999985
Q ss_pred C
Q 038344 185 K 185 (383)
Q Consensus 185 ~ 185 (383)
.
T Consensus 139 ~ 139 (244)
T 3ui2_A 139 V 139 (244)
T ss_dssp C
T ss_pred C
Confidence 4
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.68 E-value=4.3e-18 Score=161.59 Aligned_cols=130 Identities=17% Similarity=0.245 Sum_probs=106.3
Q ss_pred cCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCC-------c---------cccCCCCCcHHHHHHHcCCHHHHHHH
Q 038344 13 LGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGK-------C---------SATDVDGRNALHLAAMEGHIDVLEEL 76 (383)
Q Consensus 13 ~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~-------~---------~~~d~~G~tpLh~A~~~g~~~iv~~L 76 (383)
.++.++++++++++.+ ++||||+|+..|+ + ...|..|.||||+|+++|+.+++++|
T Consensus 76 ~~~~~~~~~l~~~g~~--------~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~L 147 (376)
T 2aja_A 76 RNAKQLWSDAHKKGIK--------SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRL 147 (376)
T ss_dssp TTCTTHHHHHHHHTCC--------HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCCHHHHHHHHHcCCC--------cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHH
Confidence 4667777777776654 4599999999999 1 13345688999999999999999999
Q ss_pred HHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccc--cccCCC
Q 038344 77 VRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNA--VNANGF 154 (383)
Q Consensus 77 l~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~--~n~~G~ 154 (383)
+++|++... ..++.+ + +||||+|+..|+.++ +++|++. |++++. .|.+|.
T Consensus 148 l~~gad~~~-------------~~i~~~--~-~TpLh~Aa~~G~~ei-----------v~~Ll~~-ga~~~~~~~d~~g~ 199 (376)
T 2aja_A 148 CELAPTEIM-------------AMIQAE--N-YHAFRLAAENGHLHV-----------LNRLCEL-APTEATAMIQAENY 199 (376)
T ss_dssp HHSCTTTHH-------------HHHSHH--H-HHHHHHHHHTTCHHH-----------HHHHHHS-CGGGHHHHHHHHHH
T ss_pred HhCCCCccc-------------cccCCC--C-CCHHHHHHHCCCHHH-----------HHHHHHc-CCccchhccCCCCC
Confidence 999975210 012323 3 999999999999999 9999996 999988 999999
Q ss_pred CHHHHHH-hccCCcchhhHHHHHHHhcCC
Q 038344 155 TAWDILA-QSKRDIKYWEIGELLRRARGN 182 (383)
Q Consensus 155 TpL~~A~-~~~~~~~~~~i~~~L~~~ga~ 182 (383)
||||+|+ . .++.+++++|+++|++
T Consensus 200 TpL~~Aa~~----~G~~eiv~~Ll~~ga~ 224 (376)
T 2aja_A 200 YAFRWAAVG----RGHHNVINFLLDCPVM 224 (376)
T ss_dssp HHHHHHHST----TCCHHHHHHHTTSHHH
T ss_pred CHHHHHHHH----CCCHHHHHHHHhCCCc
Confidence 9999999 9 8999999999998864
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.66 E-value=1.1e-16 Score=157.89 Aligned_cols=105 Identities=24% Similarity=0.266 Sum_probs=84.2
Q ss_pred CChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 038344 1 MTILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGKCSATDVDGRNALHLAAMEGHIDVLEELVRAK 80 (383)
Q Consensus 1 ~TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~ 80 (383)
+||||+||.++..|+.++++.|++.|+++ +.+|.+|+||||+|+..|+.+++++|+++|
T Consensus 172 ~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v---------------------n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g 230 (497)
T 3lvq_E 172 ELVLHLAVKVANQASLPLVDFIIQNGGHL---------------------DAKAADGNTALHYAALYNQPDCLKLLLKGR 230 (497)
T ss_dssp BCHHHHHHHTCCTTTHHHHHHHHHHSCCT---------------------TCCCSSSCCHHHHHTTTTCHHHHHHHHHTC
T ss_pred chHHHHHHHhcccccHHHHHHHHHcCCCC---------------------CccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 48999998767789999999999998877 345677889999999999999999999999
Q ss_pred CCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhhchhhHHHHhhhcccccccccccCCCCHHHHH
Q 038344 81 PDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHITYKSRAIKFFTTSTAIEVNAVNANGFTAWDIL 160 (383)
Q Consensus 81 ~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~~~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A 160 (383)
++ +|.+|.+|+||||+|+..|+.++ +++|++. |++++. +|+|.+
T Consensus 231 a~------------------~~~~d~~g~tpl~~A~~~~~~~~-----------~~~Ll~~-ga~~~~------~~~h~~ 274 (497)
T 3lvq_E 231 AL------------------VGTVNEAGETALDIARKKHHKEC-----------EELLEQA-QAGTFA------FPLHVD 274 (497)
T ss_dssp CC------------------CSCCCTTCCCHHHHHHHTTCHHH-----------HHHHHHT-CC----------------
T ss_pred CC------------------CCCcCCCCCCHHHHHHHcCCHHH-----------HHHHHHh-CCCCCC------Ccceee
Confidence 88 89999999999999999999999 9999996 999877 466654
Q ss_pred Hh
Q 038344 161 AQ 162 (383)
Q Consensus 161 ~~ 162 (383)
..
T Consensus 275 ~~ 276 (497)
T 3lvq_E 275 YS 276 (497)
T ss_dssp --
T ss_pred cc
Confidence 43
No 112
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.62 E-value=1.3e-15 Score=138.73 Aligned_cols=66 Identities=21% Similarity=0.299 Sum_probs=60.2
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhHHHHhhh
Q 038344 50 CSATDVDGRNALHLAAMEGHIDVLEELVRAKPDAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEIWITHIT 129 (383)
Q Consensus 50 ~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~~l~ 129 (383)
++.+|.+|+||||+|+..|+.+++++|+++|++ +|.+|.+|+||||+|+..|+.++
T Consensus 198 in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad------------------~~~~d~~g~tpL~~A~~~~~~~~------ 253 (278)
T 1dcq_A 198 LDKQTGKGSTALHYCCLTDNAECLKLLLRGKAS------------------IEIANESGETPLDIAKRLKHEHC------ 253 (278)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------------TTCCCTTSCCHHHHHHHTTCHHH------
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------CCCccCCCCCHHHHHHHcCCHHH------
Confidence 355778899999999999999999999999988 89999999999999999999999
Q ss_pred chhhHHHHhhhccccc
Q 038344 130 YKSRAIKFFTTSTAIE 145 (383)
Q Consensus 130 ~~~~~v~~Ll~~~g~d 145 (383)
+++|++. |++
T Consensus 254 -----v~~Ll~~-ga~ 263 (278)
T 1dcq_A 254 -----EELLTQA-LSG 263 (278)
T ss_dssp -----HHHHHHH-HTT
T ss_pred -----HHHHHHc-CCC
Confidence 9999986 664
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.62 E-value=1.7e-15 Score=117.90 Aligned_cols=80 Identities=29% Similarity=0.480 Sum_probs=70.0
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCCccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 038344 2 TILQLAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGKCSATDVDGRNALHLAAMEGHIDVLEELVRAKP 81 (383)
Q Consensus 2 TpLh~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~~~~ 81 (383)
||||+|+ ..|+.+++++|++.++++ +.+|.+|+||||+|+..|+.+++++|+++|+
T Consensus 26 t~L~~A~---~~g~~~~v~~Ll~~g~~i---------------------~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga 81 (110)
T 2zgd_A 26 KKLLEAA---RAGQDDEVRILMANGADV---------------------AAKDKNGSTPLHLAARNGHLEVVKLLLEAGA 81 (110)
T ss_dssp HHHHHHH---HHTCHHHHHHHHHTTCCT---------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred hHHHHHH---HcCCHHHHHHHHHcCCCC---------------------CccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 6788874 478888888888887765 3457788999999999999999999999988
Q ss_pred CCCchHHHHHhhccCCcccccCCCCCCCcHHHHHHHcCChhH
Q 038344 82 DAASAPLKSFLETREGSELLNANDDNGMTILHLAVADKQIEI 123 (383)
Q Consensus 82 ~~~~~~l~~l~~~~~~~~~~n~~d~~g~TpLh~A~~~~~~~~ 123 (383)
+ ++.+|.+|+||||+|+..|+.++
T Consensus 82 ~------------------~~~~d~~g~tpl~~A~~~~~~~~ 105 (110)
T 2zgd_A 82 D------------------VXAQDKFGKTAFDISIDNGNEDL 105 (110)
T ss_dssp C------------------TTCCCTTSCCHHHHHHHHTCHHH
T ss_pred C------------------ccccccCCCcHHHHHHHcCCHHH
Confidence 7 89999999999999999999999
No 114
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.52 E-value=2.5e-14 Score=135.24 Aligned_cols=98 Identities=13% Similarity=0.129 Sum_probs=90.3
Q ss_pred CCCCCcHHHHHHHc-CCHHHHHHHHHcCCCCCchHHHHHhhccCCcccccCCC--CCCCcHHHHHHHcCChhHHHHhhhc
Q 038344 54 DVDGRNALHLAAME-GHIDVLEELVRAKPDAASAPLKSFLETREGSELLNAND--DNGMTILHLAVADKQIEIWITHITY 130 (383)
Q Consensus 54 d~~G~tpLh~A~~~-g~~~iv~~Ll~~~~~~~~~~l~~l~~~~~~~~~~n~~d--~~g~TpLh~A~~~~~~~~~~~~l~~ 130 (383)
+..+.||||.|+.. |+.++++.|+++|++ +|..| .+|.||||+|+..|+.++
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gad------------------vn~~~~~~~g~TpLh~Aa~~g~~~i------- 250 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGAD------------------VNWVNGGQDNATPLIQATAANSLLA------- 250 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCC------------------TTCCCTTTTCCCHHHHHHHTTCHHH-------
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCC------------------CCccccccCCCCHHHHHHHCCCHHH-------
Confidence 34566899999999 999999999999988 78887 899999999999999999
Q ss_pred hhhHHHHhhhcccccccccccCCCCHHHHHHhccCCcchhhHHHHHHHhcCCCCC
Q 038344 131 KSRAIKFFTTSTAIEVNAVNANGFTAWDILAQSKRDIKYWEIGELLRRARGNSAK 185 (383)
Q Consensus 131 ~~~~v~~Ll~~~g~d~~~~n~~G~TpL~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 185 (383)
+++|++. |+|+|..|.+|+||||+|+. .++.+++++|+++|++...
T Consensus 251 ----v~~LL~~-Gadvn~~d~~G~TpLh~A~~----~g~~~~v~~LL~~Gad~~~ 296 (368)
T 3jue_A 251 ----CEFLLQN-GANVNQADSAGRGPLHHATI----LGHTGLACLFLKRGADLGA 296 (368)
T ss_dssp ----HHHHHHT-TCCTTCCCTTSCCHHHHHHH----HTCHHHHHHHHHTTCCTTC
T ss_pred ----HHHHHHc-CCCCCCCCCCCCCHHHHHHH----cCcHHHHHHHHHCcCCCCC
Confidence 9999996 99999999999999999999 8889999999999999854
No 115
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=60.12 E-value=13 Score=33.83 Aligned_cols=24 Identities=17% Similarity=0.030 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhh
Q 038344 296 IVMIMMGVAIGEMAWVYAVSIDVI 319 (383)
Q Consensus 296 ~~~~~~~~~~~~~~~af~~~~~~~ 319 (383)
.+..+..++++++..+|++|+|-+
T Consensus 278 ~mk~LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 278 IMKILTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhhccC
Confidence 444566788889999999999964
No 116
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=52.53 E-value=9.8 Score=34.96 Aligned_cols=27 Identities=11% Similarity=0.071 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhh----ccC
Q 038344 296 IVMIMMGVAIGEMAWVYAVSIDVI----GET 322 (383)
Q Consensus 296 ~~~~~~~~~~~~~~~af~~~~~~~----~~~ 322 (383)
.+..+..++++++..+|++|+|-+ +|.
T Consensus 302 imk~LTiit~IflP~T~IaGiyGMNf~~mPe 332 (363)
T 2iub_A 302 VMKVLTIIATIFMPLTFIAGIYGMNFEYMPE 332 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCC--------
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccCCCCCc
Confidence 444566788899999999999854 665
No 117
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=43.71 E-value=1.1e+02 Score=28.25 Aligned_cols=66 Identities=21% Similarity=0.138 Sum_probs=50.9
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcHHHHHHHcCCccccCCCCCcHHHHHHHcCCHHHHHHHHH
Q 038344 6 LAVAAALLGHEDFVNEILCQKPELARKSDSRKSSALHIASQKGKCSATDVDGRNALHLAAMEGHIDVLEELVR 78 (383)
Q Consensus 6 ~A~~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~~d~~G~tpLh~A~~~g~~~iv~~Ll~ 78 (383)
-||.....|+...|+..+..|.+.... -|.-..+..++. +. -.-|.|-+|+|++..+.|++..|+.
T Consensus 25 ~ac~gv~e~~~~~ve~y~~~gg~~~r~-----lt~~e~~lln~~-~a-f~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 25 NACVGVVEGDLAAIEAYKSSGGDIARQ-----LTADEVRLLNRP-SA-FDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHHHHTCHHHHHHHHTTTCCTTCC-----CCHHHHHHHCCT-TT-CCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHhHHHHcCChhHHHHHHhcCCchhcc-----cCHHHHHHhCCC-cc-cccCchhhhhhhhhhhhhHHHHhhh
Confidence 467778899999999999999988433 355555554442 22 3469999999999999999999987
Done!