Query 038347
Match_columns 308
No_of_seqs 182 out of 1738
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 17:19:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038347.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038347hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1okc_A ADP, ATP carrier protei 100.0 5.1E-44 1.8E-48 319.0 18.9 226 4-305 4-241 (297)
2 2lck_A Mitochondrial uncouplin 100.0 7.3E-44 2.5E-48 318.9 16.8 221 9-306 3-235 (303)
3 2lck_A Mitochondrial uncouplin 100.0 5E-35 1.7E-39 261.6 11.9 183 5-254 102-290 (303)
4 1okc_A ADP, ATP carrier protei 100.0 1.4E-33 4.8E-38 251.5 13.8 179 6-249 111-296 (297)
5 1y9i_A Low temperature require 20.6 1.4E+02 0.0048 23.4 4.7 44 73-116 111-158 (178)
6 3tgu_G UQCRQ, mitochondrial ub 12.0 91 0.0031 21.0 1.4 40 215-254 31-70 (81)
7 3vjj_A P9-1; 3.00A {Rice black 11.9 38 0.0013 28.6 -0.6 49 21-75 275-323 (368)
8 1rfz_A Hypothetical protein AP 11.4 3.7E+02 0.013 20.7 4.9 43 74-116 114-160 (168)
9 2a3d_A Protein (de novo three- 11.3 1.8E+02 0.0061 18.0 2.5 15 27-41 10-24 (73)
10 4b19_A PEPA1; toxin, toxin apo 7.6 76 0.0026 17.0 -0.2 22 275-296 5-26 (30)
No 1
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*
Probab=100.00 E-value=5.1e-44 Score=319.04 Aligned_cols=226 Identities=17% Similarity=0.231 Sum_probs=191.8
Q ss_pred chhhHHHHHHHhHHhHhHhhhcCcHHHHHHHHhhCCC------CCCcCCHHHHHHHhhccc---ccccCchhHhhhHHhh
Q 038347 4 DNLFASHAIAGVGSVALASSLTYPLDTIKVLKQVGSG------SNKQLSSLQVLNRLGSLS---GLYSGLGWSTLGRSFS 74 (308)
Q Consensus 4 ~~~~~~~~~aG~~a~~~~~~~~~Pld~iK~r~Q~~~~------~~~~~~~~~~~~~i~~~~---gly~G~~~~~~~~~~~ 74 (308)
..+.+.++++|++||+++.++++|||+||+|+|++.. ...++++++++++|+++| +||||+.+++++.++.
T Consensus 4 ~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~ 83 (297)
T 1okc_A 4 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT 83 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHH
Confidence 3567899999999999999999999999999999863 235789999999999988 8999999999999999
Q ss_pred hhhHHHHHHHHHHHhhcC-CCCCc--chHHHHHHHHhHHHHHHHHhhChHHHHHHHHhhccccccccccchhhhhhhhhh
Q 038347 75 MGARFGVYEILSAFYKDG-REDNY--VYVSEALMAGMVAGAAEALISSPFELMKVRAQVSSVIRVQTSTSVAEHVTVAPV 151 (308)
Q Consensus 75 ~~~~f~~y~~~k~~~~~~-~~~~~--~~~~~~~~ag~~ag~~~~~v~~P~e~vk~r~q~~~~~~~~~~~~~~~~~~~~~~ 151 (308)
.+++|++||.+|+.+... ..... ......+++|++||+++.++++|+|+||+|||++.....
T Consensus 84 ~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~--------------- 148 (297)
T 1okc_A 84 QALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGA--------------- 148 (297)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSST---------------
T ss_pred HHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCC---------------
Confidence 999999999999954332 11111 235678899999999999999999999999999753210
Q ss_pred HHHhhcccccchhhhhhhhhhhhhhcccchhhhHhhhhccccccCCCCCCCccccccchhhhhhcccchhccccccchhh
Q 038347 152 IRRLLHGYTPDLKALSHSAGLLSILTNKHPDLMNALQEYPWMMSGSGRPPLVSSVRRPSDIVSFEGWGAFWRGLRSGVVR 231 (308)
Q Consensus 152 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~g~y~G~~~~~lr 231 (308)
....|+++.+++ ++|+++||++|||||+.++++|
T Consensus 149 ------------------------~~~~~~~~~~~~----------------------~~i~~~eG~~glyrG~~~~l~~ 182 (297)
T 1okc_A 149 ------------------------AQREFTGLGNCI----------------------TKIFKSDGLRGLYQGFNVSVQG 182 (297)
T ss_dssp ------------------------TTCSCSSHHHHH----------------------HHHHHHHCHHHHTTTHHHHHHH
T ss_pred ------------------------cCcCCCCHHHHH----------------------HHHHHhccHHHhcCCchHHHHH
Confidence 012566777766 6999999999999999999999
Q ss_pred hcccchhHHHHHHHHHHHHHhhhhcCCCCCCCCCCCCCCCChHHHHHHHhHHHHhhhhhhchHHHHhhhhcccc
Q 038347 232 DSVFGGIFFSSWQFLHRAMLDWKAVGMDPEPRSDEEIGPLPPLYVSLAAGFSGAVAAAASHCFDTAKNRSQCIV 305 (308)
Q Consensus 232 ~~~~~~~~~~~ye~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lag~~a~~~t~P~Dvvktr~Q~~~ 305 (308)
.+|+++++|.+||.+|+.+.+.. ..+....+++|++||++++++++|+||||+|||++.
T Consensus 183 ~~~~~~~~f~~ye~~k~~~~~~~---------------~~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~q~~~ 241 (297)
T 1okc_A 183 IIIYRAAYFGVYDTAKGMLPDPK---------------NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQS 241 (297)
T ss_dssp HHHHHHHHHHHHHHHHHSSCGGG---------------CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHhccCC---------------CccHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcC
Confidence 99999999999999999663211 135677899999999999999999999999999875
No 2
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=100.00 E-value=7.3e-44 Score=318.93 Aligned_cols=221 Identities=21% Similarity=0.284 Sum_probs=192.4
Q ss_pred HHHHHHhHHhHhHhhhcCcHHHHHHHHhhCCCC---------CCcCCHHHHHHHhhccc---ccccCchhHhhhHHhhhh
Q 038347 9 SHAIAGVGSVALASSLTYPLDTIKVLKQVGSGS---------NKQLSSLQVLNRLGSLS---GLYSGLGWSTLGRSFSMG 76 (308)
Q Consensus 9 ~~~~aG~~a~~~~~~~~~Pld~iK~r~Q~~~~~---------~~~~~~~~~~~~i~~~~---gly~G~~~~~~~~~~~~~ 76 (308)
.++++|++||+++.++++|||+||+|+|++... ..+.++++++++|+++| +||||+.+++++.++..+
T Consensus 3 ~~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~ 82 (303)
T 2lck_A 3 VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFAS 82 (303)
T ss_dssp CHHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHH
T ss_pred hhHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHH
Confidence 478999999999999999999999999998752 35789999999999988 899999999999999999
Q ss_pred hHHHHHHHHHHHhhcCCCCCcchHHHHHHHHhHHHHHHHHhhChHHHHHHHHhhccccccccccchhhhhhhhhhHHHhh
Q 038347 77 ARFGVYEILSAFYKDGREDNYVYVSEALMAGMVAGAAEALISSPFELMKVRAQVSSVIRVQTSTSVAEHVTVAPVIRRLL 156 (308)
Q Consensus 77 ~~f~~y~~~k~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~v~~P~e~vk~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (308)
++|++||.+|+.+.+..+ ..+....+++|++||+++.++++|+|+||+|||++....
T Consensus 83 i~f~~ye~~k~~~~~~~~--~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~--------------------- 139 (303)
T 2lck_A 83 VRIGLYDSVKQFYTKGSE--HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAG--------------------- 139 (303)
T ss_dssp HTTTHHHHHHHHHSCCCS--SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCC---------------------
T ss_pred HHHHHHHHHHHHHhcCCc--CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccC---------------------
Confidence 999999999999875422 356778999999999999999999999999999986421
Q ss_pred cccccchhhhhhhhhhhhhhcccchhhhHhhhhccccccCCCCCCCccccccchhhhhhcccchhccccccchhhhcccc
Q 038347 157 HGYTPDLKALSHSAGLLSILTNKHPDLMNALQEYPWMMSGSGRPPLVSSVRRPSDIVSFEGWGAFWRGLRSGVVRDSVFG 236 (308)
Q Consensus 157 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~g~y~G~~~~~lr~~~~~ 236 (308)
....|+++.+++ ++|+++||++|||||+.++++|.+|++
T Consensus 140 -------------------~~~~~~~~~~~~----------------------~~i~~~eG~~glyrG~~~~l~~~~~~~ 178 (303)
T 2lck_A 140 -------------------GGRRYQSTVEAY----------------------KTIAREEGIRGLWKGTSPNVARNAIVN 178 (303)
T ss_dssp -------------------CSSSCCCHHHHH----------------------HHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred -------------------CCCCCCCHHHHH----------------------HHHHHhcChhhhhCCccHHHHHHHHHH
Confidence 012566777766 699999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhhhhcCCCCCCCCCCCCCCCChHHHHHHHhHHHHhhhhhhchHHHHhhhhccccC
Q 038347 237 GIFFSSWQFLHRAMLDWKAVGMDPEPRSDEEIGPLPPLYVSLAAGFSGAVAAAASHCFDTAKNRSQCIVL 306 (308)
Q Consensus 237 ~~~~~~ye~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lag~~a~~~t~P~Dvvktr~Q~~~~ 306 (308)
+++|.+||.+|+.+.+.. ..+.+....+++|++||++++++++|+|+||+|||++..
T Consensus 179 ~i~f~~ye~~k~~l~~~~-------------~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~ 235 (303)
T 2lck_A 179 CAELVTYDLIKDTLLKAN-------------LMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAL 235 (303)
T ss_dssp HHHHHHHHHHHHTTTTTT-------------SCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHHHHHhcc-------------CCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccc
Confidence 999999999999875421 112456788999999999999999999999999999853
No 3
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=100.00 E-value=5e-35 Score=261.59 Aligned_cols=183 Identities=19% Similarity=0.255 Sum_probs=162.2
Q ss_pred hhhHHHHHHHhHHhHhHhhhcCcHHHHHHHHhhCCC---CCCcCCHHHHHHHhhccc---ccccCchhHhhhHHhhhhhH
Q 038347 5 NLFASHAIAGVGSVALASSLTYPLDTIKVLKQVGSG---SNKQLSSLQVLNRLGSLS---GLYSGLGWSTLGRSFSMGAR 78 (308)
Q Consensus 5 ~~~~~~~~aG~~a~~~~~~~~~Pld~iK~r~Q~~~~---~~~~~~~~~~~~~i~~~~---gly~G~~~~~~~~~~~~~~~ 78 (308)
.+.+..+++|++||+++.++++|+|+||+|+|++.. ...+.++++++++|+++| +||||+.+++++.++..+++
T Consensus 102 ~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~ 181 (303)
T 2lck_A 102 AGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAE 181 (303)
T ss_dssp CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHH
Confidence 466789999999999999999999999999999874 346789999999999988 89999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCcchHHHHHHHHhHHHHHHHHhhChHHHHHHHHhhccccccccccchhhhhhhhhhHHHhhcc
Q 038347 79 FGVYEILSAFYKDGREDNYVYVSEALMAGMVAGAAEALISSPFELMKVRAQVSSVIRVQTSTSVAEHVTVAPVIRRLLHG 158 (308)
Q Consensus 79 f~~y~~~k~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~v~~P~e~vk~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 158 (308)
|.+||.+|+.+.+... ...+....+++|++||+++.++++|+|+||+|||++...
T Consensus 182 f~~ye~~k~~l~~~~~-~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~~------------------------ 236 (303)
T 2lck_A 182 LVTYDLIKDTLLKANL-MTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALG------------------------ 236 (303)
T ss_dssp HHHHHHHHHTTTTTTS-CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSS------------------------
T ss_pred HHHHHHHHHHHHhccC-CCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhcccc------------------------
Confidence 9999999998875322 234567789999999999999999999999999987532
Q ss_pred cccchhhhhhhhhhhhhhcccchhhhHhhhhccccccCCCCCCCccccccchhhhhhcccchhccccccchhhhcccchh
Q 038347 159 YTPDLKALSHSAGLLSILTNKHPDLMNALQEYPWMMSGSGRPPLVSSVRRPSDIVSFEGWGAFWRGLRSGVVRDSVFGGI 238 (308)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~g~y~G~~~~~lr~~~~~~~ 238 (308)
.|+++.+++ ++|+++||++|||||+.|+++|.+|.+++
T Consensus 237 --------------------~y~~~~~~~----------------------~~i~~~eG~~glyrG~~~~~~r~~p~~~i 274 (303)
T 2lck_A 237 --------------------QYHSAGHCA----------------------LTMLRKEGPRAFYKGFMPSFLRLGSWNVV 274 (303)
T ss_dssp --------------------SCCSHHHHH----------------------HHHHHSSCTHHHHSCCHHHHHHHHHHHHH
T ss_pred --------------------ccCCHHHHH----------------------HHHHHHcChHHhhccHHHHHHHHHhHHHH
Confidence 367777776 59999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhh
Q 038347 239 FFSSWQFLHRAMLDWK 254 (308)
Q Consensus 239 ~~~~ye~~k~~~~~~~ 254 (308)
+|.+||.+|+.+.+..
T Consensus 275 ~f~~ye~~k~~l~~~~ 290 (303)
T 2lck_A 275 MFVTYEQLKRALMAAY 290 (303)
T ss_dssp HHHHHHHHHSCCCCHH
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999998876543
No 4
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*
Probab=100.00 E-value=1.4e-33 Score=251.48 Aligned_cols=179 Identities=22% Similarity=0.306 Sum_probs=152.6
Q ss_pred hhHHHHHHHhHHhHhHhhhcCcHHHHHHHHhhCCC----CCCcCCHHHHHHHhhccc---ccccCchhHhhhHHhhhhhH
Q 038347 6 LFASHAIAGVGSVALASSLTYPLDTIKVLKQVGSG----SNKQLSSLQVLNRLGSLS---GLYSGLGWSTLGRSFSMGAR 78 (308)
Q Consensus 6 ~~~~~~~aG~~a~~~~~~~~~Pld~iK~r~Q~~~~----~~~~~~~~~~~~~i~~~~---gly~G~~~~~~~~~~~~~~~ 78 (308)
+++.++++|++||+++.++++|+|+||+|+|++.. ...+.++++++++|+++| +||||+.+++++.++..+++
T Consensus 111 ~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~ 190 (297)
T 1okc_A 111 YFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAY 190 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHHHHHHHhccHHHhcCCchHHHHHHHHHHHHH
Confidence 45778999999999999999999999999999854 235789999999999988 89999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCcchHHHHHHHHhHHHHHHHHhhChHHHHHHHHhhccccccccccchhhhhhhhhhHHHhhcc
Q 038347 79 FGVYEILSAFYKDGREDNYVYVSEALMAGMVAGAAEALISSPFELMKVRAQVSSVIRVQTSTSVAEHVTVAPVIRRLLHG 158 (308)
Q Consensus 79 f~~y~~~k~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~v~~P~e~vk~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 158 (308)
|.+||.+|+.+.+.. ..+....+++|++||+++.++++|+|+||+|||++.....
T Consensus 191 f~~ye~~k~~~~~~~---~~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~q~~~~~~~---------------------- 245 (297)
T 1okc_A 191 FGVYDTAKGMLPDPK---NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKG---------------------- 245 (297)
T ss_dssp HHHHHHHHHSSCGGG---CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCG----------------------
T ss_pred HHHHHHHHHHhccCC---CccHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCCCCC----------------------
Confidence 999999999775422 2356778899999999999999999999999998753210
Q ss_pred cccchhhhhhhhhhhhhhcccchhhhHhhhhccccccCCCCCCCccccccchhhhhhcccchhccccccchhhhcccchh
Q 038347 159 YTPDLKALSHSAGLLSILTNKHPDLMNALQEYPWMMSGSGRPPLVSSVRRPSDIVSFEGWGAFWRGLRSGVVRDSVFGGI 238 (308)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~g~y~G~~~~~lr~~~~~~~ 238 (308)
....|+++.+++ ++|+++||++|||||+.|+++|. +.+++
T Consensus 246 -----------------~~~~y~~~~~~~----------------------~~i~~~eG~~glyrG~~~~~~r~-~~~~~ 285 (297)
T 1okc_A 246 -----------------ADIMYTGTVDCW----------------------RKIAKDEGPKAFFKGAWSNVLRG-MGGAF 285 (297)
T ss_dssp -----------------GGCSCSSHHHHH----------------------HHHHHHHCGGGGGTTHHHHHHHH-HHHHH
T ss_pred -----------------CCCCCCCHHHHH----------------------HHHHHHcCcCeEecchHHHHHhh-cccee
Confidence 012577777777 69999999999999999999996 57899
Q ss_pred HHHHHHHHHHH
Q 038347 239 FFSSWQFLHRA 249 (308)
Q Consensus 239 ~~~~ye~~k~~ 249 (308)
+|.+||.+|++
T Consensus 286 ~f~~ye~~k~~ 296 (297)
T 1okc_A 286 VLVLYDEIKKF 296 (297)
T ss_dssp HHHHHHTC---
T ss_pred eehHHHHHHhh
Confidence 99999998875
No 5
>1y9i_A Low temperature requirement C protein; structural genomics, protein structure initiative, PSI; 1.80A {Listeria monocytogenes} SCOP: a.195.1.1
Probab=20.59 E-value=1.4e+02 Score=23.42 Aligned_cols=44 Identities=11% Similarity=0.003 Sum_probs=27.1
Q ss_pred hhhhhHHHHHHHHHHHhhc----CCCCCcchHHHHHHHHhHHHHHHHH
Q 038347 73 FSMGARFGVYEILSAFYKD----GREDNYVYVSEALMAGMVAGAAEAL 116 (308)
Q Consensus 73 ~~~~~~f~~y~~~k~~~~~----~~~~~~~~~~~~~~ag~~ag~~~~~ 116 (308)
....+.|..||..|-..-. .....-......++||..|+++..+
T Consensus 111 ~~gf~~Fr~fDi~KPgpI~~ld~~~~gg~gimlDDivAgi~A~~~~~l 158 (178)
T 1y9i_A 111 SIGFTNYGYIDKVKPGILAKLNEHDGIAVHTFLDDIVGAIAAAAASRL 158 (178)
T ss_dssp GGGHHHHHHHHHHCCTHHHHTTCCCSSCCCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccchhHHhhhcccCCCCcchHHHHHHHHHHHHHHHH
Confidence 3456668888887754321 1122333567788888888876644
No 6
>3tgu_G UQCRQ, mitochondrial ubiquinol-cytochrome C reductase UB binding protein QP-C; cytochrome BC1, membrane protein, heme protein, rieske iron protein; HET: HEM WF3 UQ CDL PEE HEC BOG; 2.70A {Gallus gallus} PDB: 3cwb_G* 3h1i_G* 3h1h_G* 3h1k_G* 3h1l_G* 3h1j_G* 3l71_G* 3l72_G* 3l73_G* 3l74_G* 3l75_G* 3l70_G*
Probab=11.98 E-value=91 Score=21.03 Aligned_cols=40 Identities=13% Similarity=0.067 Sum_probs=32.2
Q ss_pred hcccchhccccccchhhhcccchhHHHHHHHHHHHHHhhh
Q 038347 215 FEGWGAFWRGLRSGVVRDSVFGGIFFSSWQFLHRAMLDWK 254 (308)
Q Consensus 215 ~eG~~g~y~G~~~~~lr~~~~~~~~~~~ye~~k~~~~~~~ 254 (308)
..|+...||-+...++..+|..++.+.+|++.++......
T Consensus 31 ~~~i~N~~RR~~~q~l~v~pPfi~~Y~i~~Wa~~~ne~l~ 70 (81)
T 3tgu_G 31 SDALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLK 70 (81)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhhhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 3566677777888888899999999999999988776543
No 7
>3vjj_A P9-1; 3.00A {Rice black streaked dwarf virus}
Probab=11.88 E-value=38 Score=28.63 Aligned_cols=49 Identities=18% Similarity=0.169 Sum_probs=27.2
Q ss_pred HhhhcCcHHHHHHHHhhCCCCCCcCCHHHHHHHhhcccccccCchhHhhhHHhhh
Q 038347 21 ASSLTYPLDTIKVLKQVGSGSNKQLSSLQVLNRLGSLSGLYSGLGWSTLGRSFSM 75 (308)
Q Consensus 21 ~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~i~~~~gly~G~~~~~~~~~~~~ 75 (308)
+..=-+|||.+|-.++..- ++-..+++.+..+|||+-+...-++..+..
T Consensus 275 aTFdnypfdllRfqL~Sli------stp~~I~e~i~K~GLFk~it~~~~rg~~~q 323 (368)
T 3vjj_A 275 ATFDNYPFDLLRFQLSSLI------STPALIREKIAKEGLFKIITSNTLRGASRQ 323 (368)
T ss_dssp HHCTTCBHHHHHHHCSSCC------CCCHHHHHHHHHSCSEEECC----------
T ss_pred ecCCCCCHHHHHHHhhhhc------cChHHHHHHHHhcCceEEEecccccCCccc
Confidence 4455689999776665432 344667777777899988877666554443
No 8
>1rfz_A Hypothetical protein APC35681; structural genomics, PSI, protein structure initiative, midwest center for structural genomics; 2.80A {Geobacillus stearothermophilus} SCOP: a.195.1.1
Probab=11.44 E-value=3.7e+02 Score=20.75 Aligned_cols=43 Identities=12% Similarity=0.105 Sum_probs=26.5
Q ss_pred hhhhHHHHHHHHHHH----hhcCCCCCcchHHHHHHHHhHHHHHHHH
Q 038347 74 SMGARFGVYEILSAF----YKDGREDNYVYVSEALMAGMVAGAAEAL 116 (308)
Q Consensus 74 ~~~~~f~~y~~~k~~----~~~~~~~~~~~~~~~~~ag~~ag~~~~~ 116 (308)
...+.|..||..|-. +.+...+.-......++||..|+++..+
T Consensus 114 ~gf~~Fr~fDi~KPgpI~~ld~~~~gg~gimlDDivAgi~A~~~~~l 160 (168)
T 1rfz_A 114 IGFTNYGYIDKQKPGILQYLNDKSTGKCNTFLDDIVGAIAAAASSRL 160 (168)
T ss_dssp THHHHHHHHHHHCCTHHHHHHCSSSSCCCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccchhHHHhhcccCCCCcchHHHHHHHHHHHHHHHH
Confidence 445667888877743 2222223334567788888888876643
No 9
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=11.31 E-value=1.8e+02 Score=17.96 Aligned_cols=15 Identities=40% Similarity=0.310 Sum_probs=11.3
Q ss_pred cHHHHHHHHhhCCCC
Q 038347 27 PLDTIKVLKQVGSGS 41 (308)
Q Consensus 27 Pld~iK~r~Q~~~~~ 41 (308)
-+..||+|+|.-++.
T Consensus 10 rlaaiktrlqalggs 24 (73)
T 2a3d_A 10 RLAAIKTRLQALGGS 24 (73)
T ss_dssp HHHHHHHHHHHCSSG
T ss_pred HHHHHHHHHHHhcCc
Confidence 356699999998753
No 10
>4b19_A PEPA1; toxin, toxin apoptotic peptide, apoptosis; NMR {Staphylococcus aureus}
Probab=7.63 E-value=76 Score=16.98 Aligned_cols=22 Identities=23% Similarity=0.093 Sum_probs=15.9
Q ss_pred HHHHHHhHHHHhhhhhhchHHH
Q 038347 275 YVSLAAGFSGAVAAAASHCFDT 296 (308)
Q Consensus 275 ~~~~~g~lag~~a~~~t~P~Dv 296 (308)
.+.++-.++|++-++++|-++-
T Consensus 5 v~iia~visGcivalF~hWL~~ 26 (30)
T 4b19_A 5 VHIIAPVISGCAIAFFSYWLSR 26 (30)
T ss_dssp TSSTTTTHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHh
Confidence 3445566788888888888763
Done!