BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038351
(348 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 30/230 (13%)
Query: 144 KWFSCLELCRVTNGFSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQ-CSGAFKSFDFE 202
K FS EL ++ FS N++ RGGFG ++K R+ D +VK + G F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 203 CDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSN--------------Y 248
+++ +RNL+++ ++LV YM GS+ CL
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 249 VGFA--LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTL 306
+G A L YLH IIH D+K +N+L D+ + DFG+AKL+ +D +
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH-VXXAVR 204
Query: 307 ATIGYMA------------SYVYSFGIMLLEVFTRKKPTNKIFFSQRNDI 344
TIG++A + V+ +G+MLLE+ T ++ + + +D+
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 254
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 30/230 (13%)
Query: 144 KWFSCLELCRVTNGFSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQ-CSGAFKSFDFE 202
K FS EL ++ F N++ RGGFG ++K R+ D +VK + G F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 203 CDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSN--------------Y 248
+++ +RNL+++ ++LV YM GS+ CL
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 249 VGFA--LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTL 306
+G A L YLH IIH D+K +N+L D+ + DFG+AKL+ +D +
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH-VXXAVR 196
Query: 307 ATIGYMA------------SYVYSFGIMLLEVFTRKKPTNKIFFSQRNDI 344
IG++A + V+ +G+MLLE+ T ++ + + +D+
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 246
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 99/219 (45%), Gaps = 40/219 (18%)
Query: 146 FSCLELCRVTNGFSE------DNLISRGGFGSIHKARIQDRMEFSVKGF----HLQCSGA 195
FS EL VTN F E N + GGFG ++K + + +VK +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITTEEL 73
Query: 196 FKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEK---CLYSS------ 246
+ FD E VM + NL++++ S+ D LV YMP GSL CL +
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 247 ------NYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFM 300
+ +LH ++ IH D+K +N+L D+ +SDFG+A+ + +
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 301 IQTQTLATIGYMA-----------SYVYSFGIMLLEVFT 328
+ ++ + T YMA S +YSFG++LLE+ T
Sbjct: 191 MXSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 98/219 (44%), Gaps = 40/219 (18%)
Query: 146 FSCLELCRVTNGFSE------DNLISRGGFGSIHKARIQDRMEFSVKGF----HLQCSGA 195
FS EL VTN F E N + GGFG ++K + + +VK +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITTEEL 73
Query: 196 FKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEK---CLYS------- 245
+ FD E VM + NL++++ S+ D LV YMP GSL CL
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 246 -----SNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFM 300
+ + +LH ++ IH D+K +N+L D+ +SDFG+A+ + +
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 301 IQTQTLATIGYMA-----------SYVYSFGIMLLEVFT 328
+ + + T YMA S +YSFG++LLE+ T
Sbjct: 191 MXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 40/219 (18%)
Query: 146 FSCLELCRVTNGFSE------DNLISRGGFGSIHKARIQDRMEFSVKGF----HLQCSGA 195
FS EL VTN F E N + GGFG ++K + + +VK +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITTEEL 67
Query: 196 FKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEK---CLYSSNYVGF- 251
+ FD E VM + NL++++ S+ D LV YMP GSL CL + + +
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 252 -----------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFM 300
+ +LH ++ IH D+K +N+L D+ +SDFG+A+ + +
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 301 IQTQTLATIGYMA-----------SYVYSFGIMLLEVFT 328
+ + + T YMA S +YSFG++LLE+ T
Sbjct: 185 MXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 223
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 25/204 (12%)
Query: 149 LELCRVTNGFSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKS 208
++L TN F LI G FG ++K ++D + ++K + S + F+ E + +
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 209 TCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEY------------- 255
+ +L+ +I + +L+ +YM G+L++ LY S+ ++ +
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 256 LHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYM--- 312
LH+ ++ IIH D+K N+L D+N V ++DFGI+K D + T+GY+
Sbjct: 152 LHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPE 211
Query: 313 ---------ASYVYSFGIMLLEVF 327
S VYSFG++L EV
Sbjct: 212 YFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 25/207 (12%)
Query: 149 LELCRVTNGFSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKS 208
++L TN F LI G FG ++K ++D + ++K + S + F+ E + +
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 209 TCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEY------------- 255
+ +L+ +I + +L+ +YM G+L++ LY S+ ++ +
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 256 LHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYM--- 312
LH+ ++ IIH D+K N+L D+N V ++DFGI+K + T+GY+
Sbjct: 152 LHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPE 211
Query: 313 ---------ASYVYSFGIMLLEVFTRK 330
S VYSFG++L EV +
Sbjct: 212 YFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 42/220 (19%)
Query: 146 FSCLELCRVTNGFSE------DNLISRGGFGSIHKARIQDRMEFSVKGF----HLQCSGA 195
FS EL VTN F E N GGFG ++K + + +VK +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITTEEL 64
Query: 196 FKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL---------------- 239
+ FD E V + NL++++ S+ D LV Y P GSL
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 240 EKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHF 299
+C + + +LH ++ IH D+K +N+L D+ +SDFG+A+ +
Sbjct: 125 XRCKIAQGAAN-GINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 300 MIQTQTLATIGYMA-----------SYVYSFGIMLLEVFT 328
+ ++ + T Y A S +YSFG++LLE+ T
Sbjct: 181 VXXSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIIT 220
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 33/206 (16%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDF--ECDVMKSTCYRNLIKIISSR 221
I G FG++H+A + +VK Q A + +F E +MK + N++ + +
Sbjct: 45 IGAGSFGTVHRAEWHGS-DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 222 SNEDFKVLVLEYMPRGSLEKCLYSSNY---------------VGFALEYLHFDYSVLIIH 266
+ +V EY+ RGSL + L+ S V + YLH + + I+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 267 YDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------S 314
DLK N+L D + DFG+++L + F+ T +MA S
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKS 220
Query: 315 YVYSFGIMLLEVFTRKKPTNKIFFSQ 340
VYSFG++L E+ T ++P + +Q
Sbjct: 221 DVYSFGVILWELATLQQPWGNLNPAQ 246
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 33/206 (16%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDF--ECDVMKSTCYRNLIKIISSR 221
I G FG++H+A + +VK Q A + +F E +MK + N++ + +
Sbjct: 45 IGAGSFGTVHRAEWHGS-DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 222 SNEDFKVLVLEYMPRGSLEKCLYSSNY---------------VGFALEYLHFDYSVLIIH 266
+ +V EY+ RGSL + L+ S V + YLH + + I+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 267 YDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------S 314
+LK N+L D + DFG+++L + F+ T +MA S
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKS 220
Query: 315 YVYSFGIMLLEVFTRKKPTNKIFFSQ 340
VYSFG++L E+ T ++P + +Q
Sbjct: 221 DVYSFGVILWELATLQQPWGNLNPAQ 246
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 30/202 (14%)
Query: 161 DNLISRGGFGSIHKARIQD----RMEFSVKGFH-LQCSGAFKSFDFECDVMKSTCYRNLI 215
+ +I RG FG ++ + D ++ +VK + + G F E +MK + N++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 216 KIIS-SRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------VGFALEY---LHFDYSVLI 264
++ +E ++VL YM G L + + + +GF L+ + + S
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 173
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT--IGYMA--------- 313
+H DL N + D+ ++DFG+A+ + ++++ + +T A + +MA
Sbjct: 174 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 233
Query: 314 ---SYVYSFGIMLLEVFTRKKP 332
S V+SFG++L E+ TR P
Sbjct: 234 TTKSDVWSFGVLLWELMTRGAP 255
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 30/202 (14%)
Query: 161 DNLISRGGFGSIHKARIQD----RMEFSVKGFH-LQCSGAFKSFDFECDVMKSTCYRNLI 215
+ +I RG FG ++ + D ++ +VK + + G F E +MK + N++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 216 KIIS-SRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------VGFALEY---LHFDYSVLI 264
++ +E ++VL YM G L + + + +GF L+ + + S
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 146
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT--IGYMA--------- 313
+H DL N + D+ ++DFG+A+ + ++++ + +T A + +MA
Sbjct: 147 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 206
Query: 314 ---SYVYSFGIMLLEVFTRKKP 332
S V+SFG++L E+ TR P
Sbjct: 207 TTKSDVWSFGVLLWELMTRGAP 228
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 30/202 (14%)
Query: 161 DNLISRGGFGSIHKARIQD----RMEFSVKGFH-LQCSGAFKSFDFECDVMKSTCYRNLI 215
+ +I RG FG ++ + D ++ +VK + + G F E +MK + N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 216 KIIS-SRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------VGFALEY---LHFDYSVLI 264
++ +E ++VL YM G L + + + +GF L+ + + S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 154
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT--IGYMA--------- 313
+H DL N + D+ ++DFG+A+ + ++++ + +T A + +MA
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 314 ---SYVYSFGIMLLEVFTRKKP 332
S V+SFG++L E+ TR P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAP 236
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 30/202 (14%)
Query: 161 DNLISRGGFGSIHKARIQD----RMEFSVKGFH-LQCSGAFKSFDFECDVMKSTCYRNLI 215
+ +I RG FG ++ + D ++ +VK + + G F E +MK + N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 216 KIIS-SRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------VGFALEY---LHFDYSVLI 264
++ +E ++VL YM G L + + + +GF L+ + + S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 154
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT--IGYMA--------- 313
+H DL N + D+ ++DFG+A+ + ++++ + +T A + +MA
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 314 ---SYVYSFGIMLLEVFTRKKP 332
S V+SFG++L E+ TR P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAP 236
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 30/202 (14%)
Query: 161 DNLISRGGFGSIHKARIQD----RMEFSVKGFH-LQCSGAFKSFDFECDVMKSTCYRNLI 215
+ +I RG FG ++ + D ++ +VK + + G F E +MK + N++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 216 KIIS-SRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------VGFALEY---LHFDYSVLI 264
++ +E ++VL YM G L + + + +GF L+ + + S
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 172
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT--IGYMA--------- 313
+H DL N + D+ ++DFG+A+ + ++++ + +T A + +MA
Sbjct: 173 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 232
Query: 314 ---SYVYSFGIMLLEVFTRKKP 332
S V+SFG++L E+ TR P
Sbjct: 233 TTKSDVWSFGVLLWELMTRGAP 254
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 30/202 (14%)
Query: 161 DNLISRGGFGSIHKARIQD----RMEFSVKGFH-LQCSGAFKSFDFECDVMKSTCYRNLI 215
+ +I RG FG ++ + D ++ +VK + + G F E +MK + N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 216 KIIS-SRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------VGFALEY---LHFDYSVLI 264
++ +E ++VL YM G L + + + +GF L+ + + S
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 151
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT--IGYMA--------- 313
+H DL N + D+ ++DFG+A+ + ++++ + +T A + +MA
Sbjct: 152 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 211
Query: 314 ---SYVYSFGIMLLEVFTRKKP 332
S V+SFG++L E+ TR P
Sbjct: 212 TTKSDVWSFGVLLWELMTRGAP 233
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 30/202 (14%)
Query: 161 DNLISRGGFGSIHKARIQD----RMEFSVKGFH-LQCSGAFKSFDFECDVMKSTCYRNLI 215
+ +I RG FG ++ + D ++ +VK + + G F E +MK + N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 216 KIIS-SRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------VGFALEY---LHFDYSVLI 264
++ +E ++VL YM G L + + + +GF L+ + + S
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 153
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT--IGYMA--------- 313
+H DL N + D+ ++DFG+A+ + ++++ + +T A + +MA
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 213
Query: 314 ---SYVYSFGIMLLEVFTRKKP 332
S V+SFG++L E+ TR P
Sbjct: 214 TTKSDVWSFGVLLWELMTRGAP 235
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 30/202 (14%)
Query: 161 DNLISRGGFGSIHKARIQD----RMEFSVKGFH-LQCSGAFKSFDFECDVMKSTCYRNLI 215
+ +I RG FG ++ + D ++ +VK + + G F E +MK + N++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 216 KIIS-SRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------VGFALEY---LHFDYSVLI 264
++ +E ++VL YM G L + + + +GF L+ + + S
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 149
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT--IGYMA--------- 313
+H DL N + D+ ++DFG+A+ + ++++ + +T A + +MA
Sbjct: 150 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 209
Query: 314 ---SYVYSFGIMLLEVFTRKKP 332
S V+SFG++L E+ TR P
Sbjct: 210 TTKSDVWSFGVLLWELMTRGAP 231
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 30/202 (14%)
Query: 161 DNLISRGGFGSIHKARIQD----RMEFSVKGFH-LQCSGAFKSFDFECDVMKSTCYRNLI 215
+ +I RG FG ++ + D ++ +VK + + G F E +MK + N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 216 KIIS-SRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------VGFALEY---LHFDYSVLI 264
++ +E ++VL YM G L + + + +GF L+ + + S
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 152
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT--IGYMA--------- 313
+H DL N + D+ ++DFG+A+ + ++++ + +T A + +MA
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 212
Query: 314 ---SYVYSFGIMLLEVFTRKKP 332
S V+SFG++L E+ TR P
Sbjct: 213 TTKSDVWSFGVLLWELMTRGAP 234
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 30/202 (14%)
Query: 161 DNLISRGGFGSIHKARIQD----RMEFSVKGFH-LQCSGAFKSFDFECDVMKSTCYRNLI 215
+ +I RG FG ++ + D ++ +VK + + G F E +MK + N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 216 KIIS-SRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------VGFALEY---LHFDYSVLI 264
++ +E ++VL YM G L + + + +GF L+ + F S
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 155
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT--IGYMA--------- 313
+H DL N + D+ ++DFG+A+ ++ ++ + +T A + +MA
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKF 215
Query: 314 ---SYVYSFGIMLLEVFTRKKP 332
S V+SFG++L E+ TR P
Sbjct: 216 TTKSDVWSFGVLLWELMTRGAP 237
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 38/204 (18%)
Query: 161 DNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISS 220
+ ++ RG FG + KA+ + + + ++K ++ K+F E + + N++K+ +
Sbjct: 14 EEVVGRGAFGVVCKAKWRAK-DVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 221 RSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF---------------ALEYLHFDYSVLII 265
N LV+EY GSL L+ + + + + YLH +I
Sbjct: 71 CLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 266 HYDLKPSNVLF-DDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYVY------- 317
H DLKP N+L V + DFG A + + H T + +MA V+
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTACDI--QTHM---TNNKGSAAWMAPEVFEGSNYSE 183
Query: 318 -----SFGIMLLEVFTRKKPTNKI 336
S+GI+L EV TR+KP ++I
Sbjct: 184 KCDVFSWGIILWEVITRRKPFDEI 207
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 38/204 (18%)
Query: 161 DNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISS 220
+ ++ RG FG + KA+ + + + ++K ++ K+F E + + N++K+ +
Sbjct: 13 EEVVGRGAFGVVCKAKWRAK-DVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 221 RSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF---------------ALEYLHFDYSVLII 265
N LV+EY GSL L+ + + + + YLH +I
Sbjct: 70 CLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 266 HYDLKPSNVLF-DDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYVY------- 317
H DLKP N+L V + DFG A + + H T + +MA V+
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTACDI--QTHM---TNNKGSAAWMAPEVFEGSNYSE 182
Query: 318 -----SFGIMLLEVFTRKKPTNKI 336
S+GI+L EV TR+KP ++I
Sbjct: 183 KCDVFSWGIILWEVITRRKPFDEI 206
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 38/199 (19%)
Query: 164 ISRGGFGSIHKAR---IQDRME--FSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIK-- 216
+ +G FGS+ R +QD +VK + F+ E +++KS + N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 217 -IISSRSNEDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSV 262
+ S + K L++EY+P GSL K L ++ + +EYL +
Sbjct: 78 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TK 133
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFM------------IQTQTLATIG 310
IH DL N+L ++ + DFG+ K+L ++ F ++L
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESK 193
Query: 311 Y-MASYVYSFGIMLLEVFT 328
+ +AS V+SFG++L E+FT
Sbjct: 194 FSVASDVWSFGVVLYELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 38/199 (19%)
Query: 164 ISRGGFGSIHKAR---IQDRME--FSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIK-- 216
+ +G FGS+ R +QD +VK + F+ E +++KS + N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 217 -IISSRSNEDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSV 262
+ S + K L++EY+P GSL K L ++ + +EYL +
Sbjct: 78 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TK 133
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH------------FMIQTQTLATIG 310
IH DL N+L ++ + DFG+ K+L ++ F ++L
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 193
Query: 311 Y-MASYVYSFGIMLLEVFT 328
+ +AS V+SFG++L E+FT
Sbjct: 194 FSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 38/199 (19%)
Query: 164 ISRGGFGSIHKAR---IQDRME--FSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIK-- 216
+ +G FGS+ R +QD +VK + F+ E +++KS + N++K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 217 -IISSRSNEDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSV 262
+ S + K L++EY+P GSL K L ++ + +EYL +
Sbjct: 77 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TK 132
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH------------FMIQTQTLATIG 310
IH DL N+L ++ + DFG+ K+L ++ F ++L
Sbjct: 133 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 192
Query: 311 Y-MASYVYSFGIMLLEVFT 328
+ +AS V+SFG++L E+FT
Sbjct: 193 FSVASDVWSFGVVLYELFT 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 38/199 (19%)
Query: 164 ISRGGFGSIHKAR---IQDRME--FSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIK-- 216
+ +G FGS+ R +QD +VK + F+ E +++KS + N++K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 217 -IISSRSNEDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSV 262
+ S + K L++EY+P GSL K L ++ + +EYL +
Sbjct: 82 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TK 137
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH------------FMIQTQTLATIG 310
IH DL N+L ++ + DFG+ K+L ++ F ++L
Sbjct: 138 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 197
Query: 311 Y-MASYVYSFGIMLLEVFT 328
+ +AS V+SFG++L E+FT
Sbjct: 198 FSVASDVWSFGVVLYELFT 216
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 38/199 (19%)
Query: 164 ISRGGFGSIHKAR---IQDRME--FSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIK-- 216
+ +G FGS+ R +QD +VK + F+ E +++KS + N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 217 -IISSRSNEDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSV 262
+ S + K L++EY+P GSL K L ++ + +EYL +
Sbjct: 96 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TK 151
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH------------FMIQTQTLATIG 310
IH DL N+L ++ + DFG+ K+L ++ F ++L
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 211
Query: 311 Y-MASYVYSFGIMLLEVFT 328
+ +AS V+SFG++L E+FT
Sbjct: 212 FSVASDVWSFGVVLYELFT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 38/199 (19%)
Query: 164 ISRGGFGSIHKAR---IQDRME--FSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIK-- 216
+ +G FGS+ R +QD +VK + F+ E +++KS + N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 217 -IISSRSNEDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSV 262
+ S + K L++EY+P GSL K L ++ + +EYL +
Sbjct: 96 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TK 151
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH------------FMIQTQTLATIG 310
IH DL N+L ++ + DFG+ K+L ++ F ++L
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 211
Query: 311 Y-MASYVYSFGIMLLEVFT 328
+ +AS V+SFG++L E+FT
Sbjct: 212 FSVASDVWSFGVVLYELFT 230
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 38/199 (19%)
Query: 164 ISRGGFGSIHKAR---IQDRME--FSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIK-- 216
+ +G FGS+ R +QD +VK + F+ E +++KS + N++K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 217 -IISSRSNEDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSV 262
+ S + K L++EY+P GSL K L ++ + +EYL +
Sbjct: 76 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TK 131
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH------------FMIQTQTLATIG 310
IH DL N+L ++ + DFG+ K+L ++ F ++L
Sbjct: 132 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 191
Query: 311 Y-MASYVYSFGIMLLEVFT 328
+ +AS V+SFG++L E+FT
Sbjct: 192 FSVASDVWSFGVVLYELFT 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 38/199 (19%)
Query: 164 ISRGGFGSIHKAR---IQDRME--FSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIK-- 216
+ +G FGS+ R +QD +VK + F+ E +++KS + N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 217 -IISSRSNEDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSV 262
+ S + K L++EY+P GSL K L ++ + +EYL +
Sbjct: 78 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TK 133
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH------------FMIQTQTLATIG 310
IH DL N+L ++ + DFG+ K+L ++ F ++L
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 193
Query: 311 Y-MASYVYSFGIMLLEVFT 328
+ +AS V+SFG++L E+FT
Sbjct: 194 FSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 38/199 (19%)
Query: 164 ISRGGFGSIHKAR---IQDRME--FSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIK-- 216
+ +G FGS+ R +QD +VK + F+ E +++KS + N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 217 -IISSRSNEDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSV 262
+ S + K L++EY+P GSL K L ++ + +EYL +
Sbjct: 81 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TK 136
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH------------FMIQTQTLATIG 310
IH DL N+L ++ + DFG+ K+L ++ F ++L
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 311 Y-MASYVYSFGIMLLEVFT 328
+ +AS V+SFG++L E+FT
Sbjct: 197 FSVASDVWSFGVVLYELFT 215
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 38/199 (19%)
Query: 164 ISRGGFGSIHKAR---IQDRME--FSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIK-- 216
+ +G FGS+ R +QD +VK + F+ E +++KS + N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 217 -IISSRSNEDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSV 262
+ S + K L++EY+P GSL K L ++ + +EYL +
Sbjct: 81 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLG---TK 136
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH------------FMIQTQTLATIG 310
IH DL N+L ++ + DFG+ K+L ++ F ++L
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 311 Y-MASYVYSFGIMLLEVFT 328
+ +AS V+SFG++L E+FT
Sbjct: 197 FSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 38/199 (19%)
Query: 164 ISRGGFGSIHKAR---IQDRME--FSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIK-- 216
+ +G FGS+ R +QD +VK + F+ E +++KS + N++K
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 217 -IISSRSNEDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSV 262
+ S + K L++EY+P GSL K L ++ + +EYL +
Sbjct: 85 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TK 140
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH------------FMIQTQTLATIG 310
IH DL N+L ++ + DFG+ K+L ++ F ++L
Sbjct: 141 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 200
Query: 311 Y-MASYVYSFGIMLLEVFT 328
+ +AS V+SFG++L E+FT
Sbjct: 201 FSVASDVWSFGVVLYELFT 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 38/199 (19%)
Query: 164 ISRGGFGSIHKAR---IQDRME--FSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIK-- 216
+ +G FGS+ R +QD +VK + F+ E +++KS + N++K
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 217 -IISSRSNEDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSV 262
+ S + K L++EY+P GSL K L ++ + +EYL +
Sbjct: 83 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TK 138
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH------------FMIQTQTLATIG 310
IH DL N+L ++ + DFG+ K+L ++ F ++L
Sbjct: 139 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 198
Query: 311 Y-MASYVYSFGIMLLEVFT 328
+ +AS V+SFG++L E+FT
Sbjct: 199 FSVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 38/199 (19%)
Query: 164 ISRGGFGSIHKAR---IQDRME--FSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIK-- 216
+ +G FGS+ R +QD +VK + F+ E +++KS + N++K
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 217 -IISSRSNEDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSV 262
+ S + K L++EY+P GSL K L ++ + +EYL +
Sbjct: 84 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TK 139
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH------------FMIQTQTLATIG 310
IH DL N+L ++ + DFG+ K+L ++ F ++L
Sbjct: 140 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 199
Query: 311 Y-MASYVYSFGIMLLEVFT 328
+ +AS V+SFG++L E+FT
Sbjct: 200 FSVASDVWSFGVVLYELFT 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 38/199 (19%)
Query: 164 ISRGGFGSIHKAR---IQDRME--FSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIK-- 216
+ +G FGS+ R +QD +VK + F+ E +++KS + N++K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 217 -IISSRSNEDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSV 262
+ S + K L++EY+P GSL K L ++ + +EYL +
Sbjct: 109 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TK 164
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH------------FMIQTQTLATIG 310
IH DL N+L ++ + DFG+ K+L ++ F ++L
Sbjct: 165 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 224
Query: 311 Y-MASYVYSFGIMLLEVFT 328
+ +AS V+SFG++L E+FT
Sbjct: 225 FSVASDVWSFGVVLYELFT 243
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 84/211 (39%), Gaps = 43/211 (20%)
Query: 164 ISRGGFGSIHKAR------IQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+ G FG + A +D+M +VK A K F E +++ + + +++K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 218 ISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL---------------EYLHFDYSV 262
+ D ++V EYM G L K L + L + LH +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 263 L----------IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYM 312
+H DL N L N++ + DFG+++ + D++ + T+ I +M
Sbjct: 143 ASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 202
Query: 313 ------------ASYVYSFGIMLLEVFTRKK 331
S V+SFG++L E+FT K
Sbjct: 203 PPESIMYRKFTTESDVWSFGVILWEIFTYGK 233
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 30/202 (14%)
Query: 161 DNLISRGGFGSIHKARIQD----RMEFSVKGFH-LQCSGAFKSFDFECDVMKSTCYRNLI 215
+ +I RG FG ++ + D ++ +VK + + G F E +MK + N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 216 KIIS-SRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------VGFALEY---LHFDYSVLI 264
++ +E ++VL YM G L + + + +GF L+ + F S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 154
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT--IGYMA--------- 313
+H DL N + D+ ++DFG+A+ + ++ + +T A + +MA
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 314 ---SYVYSFGIMLLEVFTRKKP 332
S V+SFG++L E+ TR P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAP 236
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 30/202 (14%)
Query: 161 DNLISRGGFGSIHKARIQD----RMEFSVKGFH-LQCSGAFKSFDFECDVMKSTCYRNLI 215
+ +I RG FG ++ + D ++ +VK + + G F E +MK + N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 216 KIIS-SRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------VGFALEY---LHFDYSVLI 264
++ +E ++VL YM G L + + + +GF L+ + F S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 154
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT--IGYMA--------- 313
+H DL N + D+ ++DFG+A+ + ++ + +T A + +MA
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 314 ---SYVYSFGIMLLEVFTRKKP 332
S V+SFG++L E+ TR P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAP 236
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 30/202 (14%)
Query: 161 DNLISRGGFGSIHKARIQD----RMEFSVKGFH-LQCSGAFKSFDFECDVMKSTCYRNLI 215
+ +I RG FG ++ + D ++ +VK + + G F E +MK + N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 216 KIIS-SRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------VGFALEY---LHFDYSVLI 264
++ +E ++VL YM G L + + + +GF L+ + F S
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 159
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT--IGYMA--------- 313
+H DL N + D+ ++DFG+A+ + ++ + +T A + +MA
Sbjct: 160 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 219
Query: 314 ---SYVYSFGIMLLEVFTRKKP 332
S V+SFG++L E+ TR P
Sbjct: 220 TTKSDVWSFGVLLWELMTRGAP 241
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 145 WFSCLELCRVTNGFSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECD 204
W E+ R T E + G FG + + +VK Q S + +F E +
Sbjct: 13 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEAN 69
Query: 205 VMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI 264
+MK ++ L+++ + + E ++ EYM GSL L + + + + L D + I
Sbjct: 70 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL-LDMAAQI 127
Query: 265 ------------IHYDLKPSNVLFDDNIVTHLSDFGIAKLL------IRED-HFMIQTQT 305
IH DL+ +N+L D + ++DFG+A+L+ RE F I+
Sbjct: 128 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 187
Query: 306 LATIGY----MASYVYSFGIMLLEVFT 328
I Y + S V+SFGI+L E+ T
Sbjct: 188 PEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 145 WFSCLELCRVTNGFSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECD 204
W E+ R T E + G FG + + +VK Q S + +F E +
Sbjct: 10 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEAN 66
Query: 205 VMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI 264
+MK ++ L+++ + + E ++ EYM GSL L + + + + L D + I
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL-LDMAAQI 124
Query: 265 ------------IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH-------FMIQTQT 305
IH DL+ +N+L D + ++DFG+A+L+ ++ F I+
Sbjct: 125 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 184
Query: 306 LATIGY----MASYVYSFGIMLLEVFT 328
I Y + S V+SFGI+L E+ T
Sbjct: 185 PEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 145 WFSCLELCRVTNGFSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECD 204
W E+ R T E + G FG + + +VK Q S + +F E +
Sbjct: 14 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEAN 70
Query: 205 VMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI 264
+MK ++ L+++ + + E ++ EYM GSL L + + + + L D + I
Sbjct: 71 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL-LDMAAQI 128
Query: 265 ------------IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH-------FMIQTQT 305
IH DL+ +N+L D + ++DFG+A+L+ ++ F I+
Sbjct: 129 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 188
Query: 306 LATIGY----MASYVYSFGIMLLEVFTRKK 331
I Y + S V+SFGI+L E+ T +
Sbjct: 189 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 30/202 (14%)
Query: 161 DNLISRGGFGSIHKARIQD----RMEFSVKGFH-LQCSGAFKSFDFECDVMKSTCYRNLI 215
+ +I RG FG ++ + D ++ +VK + + G F E +MK + N++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 216 KIIS-SRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------VGFALEY---LHFDYSVLI 264
++ +E ++VL YM G L + + + +GF L+ + F S
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 213
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT--IGYMA--------- 313
+H DL N + D+ ++DFG+A+ + ++ + +T A + +MA
Sbjct: 214 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 273
Query: 314 ---SYVYSFGIMLLEVFTRKKP 332
S V+SFG++L E+ TR P
Sbjct: 274 TTKSDVWSFGVLLWELMTRGAP 295
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 145 WFSCLELCRVTNGFSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECD 204
W E+ R T E + G FG + + +VK Q S + +F E +
Sbjct: 10 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEAN 66
Query: 205 VMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI 264
+MK ++ L+++ + + E ++ EYM GSL L + + + + L D + I
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL-LDMAAQI 124
Query: 265 ------------IHYDLKPSNVLFDDNIVTHLSDFGIAKLL------IRED-HFMIQTQT 305
IH DL+ +N+L D + ++DFG+A+L+ RE F I+
Sbjct: 125 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 184
Query: 306 LATIGY----MASYVYSFGIMLLEVFT 328
I Y + S V+SFGI+L E+ T
Sbjct: 185 PEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 30/202 (14%)
Query: 161 DNLISRGGFGSIHKARIQD----RMEFSVKGFH-LQCSGAFKSFDFECDVMKSTCYRNLI 215
+ +I RG FG ++ + D ++ +VK + + G F E +MK + N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 216 KIIS-SRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------VGFALEY---LHFDYSVLI 264
++ +E ++VL YM G L + + + +GF L+ + F S
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 152
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT--IGYMA--------- 313
+H DL N + D+ ++DFG+A+ + ++ + +T A + +MA
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 212
Query: 314 ---SYVYSFGIMLLEVFTRKKP 332
S V+SFG++L E+ TR P
Sbjct: 213 TTKSDVWSFGVLLWELMTRGAP 234
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 30/202 (14%)
Query: 161 DNLISRGGFGSIHKARIQD----RMEFSVKGFH-LQCSGAFKSFDFECDVMKSTCYRNLI 215
+ +I RG FG ++ + D ++ +VK + + G F E +MK + N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 216 KIIS-SRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------VGFALEY---LHFDYSVLI 264
++ +E ++VL YM G L + + + +GF L+ + F S
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 155
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT--IGYMA--------- 313
+H DL N + D+ ++DFG+A+ + ++ + +T A + +MA
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 215
Query: 314 ---SYVYSFGIMLLEVFTRKKP 332
S V+SFG++L E+ TR P
Sbjct: 216 TTKSDVWSFGVLLWELMTRGAP 237
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 92/202 (45%), Gaps = 30/202 (14%)
Query: 161 DNLISRGGFGSIHKARIQD----RMEFSVKGFH-LQCSGAFKSFDFECDVMKSTCYRNLI 215
+ +I RG FG ++ + D ++ +VK + + G F E +MK + N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 216 KIIS-SRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------VGFALEY---LHFDYSVLI 264
++ +E ++VL YM G L + + + +GF L+ + + S
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF 153
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT--IGYMA--------- 313
+H DL N + D+ ++DFG+A+ + ++ + +T A + +MA
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKF 213
Query: 314 ---SYVYSFGIMLLEVFTRKKP 332
S V+SFG++L E+ TR P
Sbjct: 214 TTKSDVWSFGVLLWELMTRGAP 235
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 145 WFSCLELCRVTNGFSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECD 204
W E+ R T E + G FG + + +VK Q S + +F E +
Sbjct: 12 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEAN 68
Query: 205 VMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI 264
+MK ++ L+++ + + E ++ EYM GSL L + + + + L D + I
Sbjct: 69 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL-LDMAAQI 126
Query: 265 ------------IHYDLKPSNVLFDDNIVTHLSDFGIAKLL------IRED-HFMIQTQT 305
IH DL+ +N+L D + ++DFG+A+L+ RE F I+
Sbjct: 127 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 186
Query: 306 LATIGY----MASYVYSFGIMLLEVFT 328
I Y + S V+SFGI+L E+ T
Sbjct: 187 PEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 145 WFSCLELCRVTNGFSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECD 204
W E+ R T E + G FG + + +VK Q S + +F E +
Sbjct: 4 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEAN 60
Query: 205 VMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI 264
+MK ++ L+++ + + E ++ EYM GSL L + + + + L D + I
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL-LDMAAQI 118
Query: 265 ------------IHYDLKPSNVLFDDNIVTHLSDFGIAKLL------IRED-HFMIQTQT 305
IH DL+ +N+L D + ++DFG+A+L+ RE F I+
Sbjct: 119 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 178
Query: 306 LATIGY----MASYVYSFGIMLLEVFTRKK 331
I Y + S V+SFGI+L E+ T +
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 145 WFSCLELCRVTNGFSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECD 204
W E+ R T E + G FG + + +VK Q S + +F E +
Sbjct: 9 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEAN 65
Query: 205 VMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI 264
+MK ++ L+++ + + E ++ EYM GSL L + + + + L D + I
Sbjct: 66 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL-LDMAAQI 123
Query: 265 ------------IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH-------FMIQTQT 305
IH DL+ +N+L D + ++DFG+A+L+ ++ F I+
Sbjct: 124 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 183
Query: 306 LATIGY----MASYVYSFGIMLLEVFT 328
I Y + S V+SFGI+L E+ T
Sbjct: 184 PEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 145 WFSCLELCRVTNGFSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECD 204
W E+ R T E + G FG + + +VK Q S + +F E +
Sbjct: 6 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEAN 62
Query: 205 VMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI 264
+MK ++ L+++ + + E ++ EYM GSL L + + + + L D + I
Sbjct: 63 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL-LDMAAQI 120
Query: 265 ------------IHYDLKPSNVLFDDNIVTHLSDFGIAKLL------IRED-HFMIQTQT 305
IH DL+ +N+L D + ++DFG+A+L+ RE F I+
Sbjct: 121 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 180
Query: 306 LATIGY----MASYVYSFGIMLLEVFT 328
I Y + S V+SFGI+L E+ T
Sbjct: 181 PEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 145 WFSCLELCRVTNGFSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECD 204
W E+ R T E + G FG + + +VK Q S + +F E +
Sbjct: 5 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEAN 61
Query: 205 VMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI 264
+MK ++ L+++ + + E ++ EYM GSL L + + + + L D + I
Sbjct: 62 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL-LDMAAQI 119
Query: 265 ------------IHYDLKPSNVLFDDNIVTHLSDFGIAKLL------IRED-HFMIQTQT 305
IH DL+ +N+L D + ++DFG+A+L+ RE F I+
Sbjct: 120 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 179
Query: 306 LATIGY----MASYVYSFGIMLLEVFT 328
I Y + S V+SFGI+L E+ T
Sbjct: 180 PEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 145 WFSCLELCRVTNGFSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECD 204
W E+ R T E + G FG + + +VK Q S + +F E +
Sbjct: 4 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEAN 60
Query: 205 VMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI 264
+MK ++ L+++ + + E ++ EYM GSL L + + + + L D + I
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL-LDMAAQI 118
Query: 265 ------------IHYDLKPSNVLFDDNIVTHLSDFGIAKLL------IRED-HFMIQTQT 305
IH DL+ +N+L D + ++DFG+A+L+ RE F I+
Sbjct: 119 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 178
Query: 306 LATIGY----MASYVYSFGIMLLEVFT 328
I Y + S V+SFGI+L E+ T
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 145 WFSCLELCRVTNGFSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECD 204
W E+ R T E + G FG + + +VK Q S + +F E +
Sbjct: 4 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEAN 60
Query: 205 VMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI 264
+MK ++ L+++ + + E ++ EYM GSL L + + + + L D + I
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL-LDMAAQI 118
Query: 265 ------------IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH-------FMIQTQT 305
IH DL+ +N+L D + ++DFG+A+L+ ++ F I+
Sbjct: 119 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 178
Query: 306 LATIGY----MASYVYSFGIMLLEVFTRKK 331
I Y + S V+SFGI+L E+ T +
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 26/191 (13%)
Query: 161 DNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISS 220
+ + G FG + A + +VK S + ++F E +VMK+ + L+K+ +
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAV 78
Query: 221 RSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI------------IHYD 268
+ E ++ E+M +GSL L S L L D+S I IH D
Sbjct: 79 VTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKL-IDFSAQIAEGMAFIEQRNYIHRD 136
Query: 269 LKPSNVLFDDNIVTHLSDFGIAKLL------IRED-HFMIQTQTLATIGY----MASYVY 317
L+ +N+L ++V ++DFG+A+++ RE F I+ I + + S V+
Sbjct: 137 LRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 196
Query: 318 SFGIMLLEVFT 328
SFGI+L+E+ T
Sbjct: 197 SFGILLMEIVT 207
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 22/161 (13%)
Query: 195 AFKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSS-------- 246
K F+ E ++N++ +I +D LV+EY+ +L + + S
Sbjct: 54 TLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTA 113
Query: 247 -NYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
N+ L+ + + + I+H D+KP N+L D N + DFGIAK L E
Sbjct: 114 INFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL-SETSLTQTNHV 172
Query: 306 LATIGYMA------------SYVYSFGIMLLEVFTRKKPTN 334
L T+ Y + + +YS GI+L E+ + P N
Sbjct: 173 LGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 22/184 (11%)
Query: 161 DNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISS 220
+ + G FG + A + +VK S + ++F E +VMK+ + L+K+ +
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAV 245
Query: 221 RSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI------------IHYD 268
+ E ++ E+M +GSL L S L L D+S I IH D
Sbjct: 246 VTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKL-IDFSAQIAEGMAFIEQRNYIHRD 303
Query: 269 LKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGY----MASYVYSFGIMLL 324
L+ +N+L ++V ++DFG+A++ + F I+ I + + S V+SFGI+L+
Sbjct: 304 LRAANILVSASLVCKIADFGLARVGAK---FPIKWTAPEAINFGSFTIKSDVWSFGILLM 360
Query: 325 EVFT 328
E+ T
Sbjct: 361 EIVT 364
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 38/199 (19%)
Query: 164 ISRGGFGSIHKAR---IQDRME--FSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIK-- 216
+ +G FGS+ R +QD +VK + F+ E +++KS + N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 217 -IISSRSNEDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSV 262
+ S + K L++E++P GSL K L ++ + +EYL +
Sbjct: 81 GVCYSAGRRNLK-LIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLG---TK 136
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH------------FMIQTQTLATIG 310
IH DL N+L ++ + DFG+ K+L ++ F ++L
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 311 Y-MASYVYSFGIMLLEVFT 328
+ +AS V+SFG++L E+FT
Sbjct: 197 FSVASDVWSFGVVLYELFT 215
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 145 WFSCLELCRVTNGFSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECD 204
W E+ R T E + G G + + +VK Q S + +F E +
Sbjct: 4 WEDAWEVPRETLKLVER--LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEAN 60
Query: 205 VMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI 264
+MK ++ L+++ + + E ++ EYM GSL L + + + + L D + I
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL-LDMAAQI 118
Query: 265 ------------IHYDLKPSNVLFDDNIVTHLSDFGIAKLL------IRED-HFMIQTQT 305
IH DL+ +N+L D + ++DFG+A+L+ RE F I+
Sbjct: 119 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTA 178
Query: 306 LATIGY----MASYVYSFGIMLLEVFT 328
I Y + S V+SFGI+L E+ T
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 26/191 (13%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ G FG + + +VK Q S + +F E ++MK ++ L+++ + +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 224 EDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI------------IHYDLKP 271
E ++ EYM GSL L + + + + L D + I IH DL+
Sbjct: 75 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL-LDMAAQIAEGMAFIEERNYIHRDLRA 132
Query: 272 SNVLFDDNIVTHLSDFGIAKLLIREDH-------FMIQTQTLATIGY----MASYVYSFG 320
+N+L D + ++DFG+A+L+ ++ F I+ I Y + S V+SFG
Sbjct: 133 ANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 192
Query: 321 IMLLEVFTRKK 331
I+L E+ T +
Sbjct: 193 ILLTEIVTHGR 203
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 38/199 (19%)
Query: 164 ISRGGFGSIHKAR---IQDRME--FSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIK-- 216
+ +G FGS+ R +QD +VK + F+ E +++KS + N++K
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 217 -IISSRSNEDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSV 262
+ S + K L++EY+P GSL K L ++ + +EYL +
Sbjct: 79 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TK 134
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH------------FMIQTQTLATIG 310
IH +L N+L ++ + DFG+ K+L ++ F ++L
Sbjct: 135 RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESK 194
Query: 311 Y-MASYVYSFGIMLLEVFT 328
+ +AS V+SFG++L E+FT
Sbjct: 195 FSVASDVWSFGVVLYELFT 213
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 84/211 (39%), Gaps = 46/211 (21%)
Query: 164 ISRGGFGSIHKARI------QDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+ G FG + A QD++ +VK A K F E +++ + + +++K
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 218 ISSRSNEDFKVLVLEYMPRGSLEK-------------------------CLYSSNYVGFA 252
D ++V EYM G L K L+ + +
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 253 LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYM 312
+ YL S +H DL N L +N++ + DFG+++ + D++ + T+ I +M
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 313 ------------ASYVYSFGIMLLEVFTRKK 331
S V+S G++L E+FT K
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGK 228
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 28/192 (14%)
Query: 161 DNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISS 220
+ + G FG + A + +VK S + ++F E +VMK+ + L+K+ +
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAV 251
Query: 221 RSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI------------IHYD 268
+ E ++ E+M +GSL L S L L D+S I IH D
Sbjct: 252 VTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKL-IDFSAQIAEGMAFIEQRNYIHRD 309
Query: 269 LKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYV 316
L+ +N+L ++V ++DFG+A+ +I ++ + + I + A S V
Sbjct: 310 LRAANILVSASLVCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 368
Query: 317 YSFGIMLLEVFT 328
+SFGI+L+E+ T
Sbjct: 369 WSFGILLMEIVT 380
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 27/192 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ G FG + + + +VK + + ++F E ++MK+ + L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 224 EDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI------------IHYDLKP 271
E+ ++ EYM +GSL L S L L D+S I IH DL+
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKL-IDFSAQIAEGMAYIERKNYIHRDLRA 138
Query: 272 SNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSF 319
+NVL ++++ ++DFG+A+ +I ++ + + I + A S V+SF
Sbjct: 139 ANVLVSESLMCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSF 197
Query: 320 GIMLLEVFTRKK 331
GI+L E+ T K
Sbjct: 198 GILLYEIVTYGK 209
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 41/215 (19%)
Query: 152 CRVTNGFSEDNL-----ISRGGFGSIHKAR---IQDRMEFSVKGFHLQCSGAFKSFDF-- 201
C+ F E +L + +G FGS+ R + D V LQ SG + DF
Sbjct: 1 CQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR 60
Query: 202 ECDVMKSTCYRNLIKI--ISSRSNEDFKVLVLEYMPRGSLE-------------KCLYSS 246
E ++K+ ++K +S LV+EY+P G L + L S
Sbjct: 61 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 120
Query: 247 NYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL-IREDHFMIQTQT 305
+ + +EYL S +H DL N+L + ++DFG+AKLL + +D+++++
Sbjct: 121 SQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 177
Query: 306 LATIGYMA------------SYVYSFGIMLLEVFT 328
+ I + A S V+SFG++L E+FT
Sbjct: 178 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 41/218 (18%)
Query: 149 LELCRVTNGFSEDNL-----ISRGGFGSIHKAR---IQDRMEFSVKGFHLQCSGAFKSFD 200
L C+ F E +L + +G FGS+ R + D V LQ SG + D
Sbjct: 11 LYACQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD 70
Query: 201 F--ECDVMKSTCYRNLIKI--ISSRSNEDFKVLVLEYMPRGSLE-------------KCL 243
F E ++K+ ++K +S LV+EY+P G L + L
Sbjct: 71 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL 130
Query: 244 YSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL-IREDHFMIQ 302
S+ + +EYL S +H DL N+L + ++DFG+AKLL + +D+++++
Sbjct: 131 LYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 187
Query: 303 TQTLATIGYMA------------SYVYSFGIMLLEVFT 328
+ I + A S V+SFG++L E+FT
Sbjct: 188 EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 86/216 (39%), Gaps = 54/216 (25%)
Query: 164 ISRGGFGSIHKARI------QDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+ G FG + A QD+M +VK A + F E +++ ++++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 218 ISSRSNEDFKVLVLEYMPRGSLEKCLYS---------------------------SNYVG 250
+ ++V EYM G L + L S ++ V
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 251 FALEYL---HFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLA 307
+ YL HF +H DL N L +V + DFG+++ + D++ + +T+
Sbjct: 146 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 308 TIGYM------------ASYVYSFGIMLLEVFTRKK 331
I +M S V+SFG++L E+FT K
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 235
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 26/191 (13%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ G FG + + +VK Q S + +F E ++MK ++ L+++ + +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 224 EDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI------------IHYDLKP 271
E ++ EYM GSL L + + + + L D + I IH +L+
Sbjct: 76 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL-LDMAAQIAEGMAFIEERNYIHRNLRA 133
Query: 272 SNVLFDDNIVTHLSDFGIAKLLIREDH-------FMIQTQTLATIGY----MASYVYSFG 320
+N+L D + ++DFG+A+L+ ++ F I+ I Y + S V+SFG
Sbjct: 134 ANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 193
Query: 321 IMLLEVFTRKK 331
I+L E+ T +
Sbjct: 194 ILLTEIVTHGR 204
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 86/216 (39%), Gaps = 54/216 (25%)
Query: 164 ISRGGFGSIHKARI------QDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+ G FG + A QD+M +VK A + F E +++ ++++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 218 ISSRSNEDFKVLVLEYMPRGSLEKCLYS---------------------------SNYVG 250
+ ++V EYM G L + L S ++ V
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 251 FALEYL---HFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLA 307
+ YL HF +H DL N L +V + DFG+++ + D++ + +T+
Sbjct: 140 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 308 TIGYM------------ASYVYSFGIMLLEVFTRKK 331
I +M S V+SFG++L E+FT K
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 229
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 86/216 (39%), Gaps = 54/216 (25%)
Query: 164 ISRGGFGSIHKARI------QDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+ G FG + A QD+M +VK A + F E +++ ++++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 218 ISSRSNEDFKVLVLEYMPRGSLEKCLYS---------------------------SNYVG 250
+ ++V EYM G L + L S ++ V
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 251 FALEYL---HFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLA 307
+ YL HF +H DL N L +V + DFG+++ + D++ + +T+
Sbjct: 169 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 308 TIGYM------------ASYVYSFGIMLLEVFTRKK 331
I +M S V+SFG++L E+FT K
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 258
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 36/198 (18%)
Query: 164 ISRGGFGSIHKAR---IQDRMEFSVKGFHLQCSGAFKSFDF--ECDVMKSTCYRNLIKI- 217
+ +G FGS+ R + D V LQ SG + DF E ++K+ ++K
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 218 -ISSRSNEDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSVL 263
+S LV+EY+P G L + L S+ + +EYL S
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRR 135
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLL-IREDHFMIQTQTLATIGYMA--------- 313
+H DL N+L + ++DFG+AKLL + +D+++++ + I + A
Sbjct: 136 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 195
Query: 314 ---SYVYSFGIMLLEVFT 328
S V+SFG++L E+FT
Sbjct: 196 SRQSDVWSFGVVLYELFT 213
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 32/173 (18%)
Query: 184 SVKGFHLQCSGAFKS-FDFECDVMKSTCYRNLIKIISSRSNEDFKVL--VLEYMPRGSLE 240
+VK C +S + E D++++ + ++IK ++ K L V+EY+P GSL
Sbjct: 47 AVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLR 106
Query: 241 KCLYSSNYVGFA------------LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFG 288
L + +G A + YLH + IH +L NVL D++ + + DFG
Sbjct: 107 DYL-PRHSIGLAQLLLFAQQICEGMAYLHAQH---YIHRNLAARNVLLDNDRLVKIGDFG 162
Query: 289 IAKLL--------IREDH----FMIQTQTLATIG-YMASYVYSFGIMLLEVFT 328
+AK + +RED F + L Y AS V+SFG+ L E+ T
Sbjct: 163 LAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 26/170 (15%)
Query: 184 SVKGFHLQCSGAFKS-FDFECDVMKSTCYRNLIKIISSRSNEDFKVL--VLEYMPRGSLE 240
+VK C +S + E D++++ + ++IK ++ K L V+EY+P GSL
Sbjct: 47 AVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLR 106
Query: 241 KCLYSSNYVGFA---------LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
L + +G A E + + +S IH +L NVL D++ + + DFG+AK
Sbjct: 107 DYL-PRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
Query: 292 LL--------IREDH----FMIQTQTLATIG-YMASYVYSFGIMLLEVFT 328
+ +RED F + L Y AS V+SFG+ L E+ T
Sbjct: 166 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDF--ECDVMKSTCYRNLIKIISSR 221
I G FG +H ++ + ++K GA DF E +VM + L+++
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 222 SNEDFKVLVLEYMPRGSL------EKCLYSSN-YVGFAL---EYLHFDYSVLIIHYDLKP 271
+ LV E+M G L ++ L+++ +G L E + + +IH DL
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAA 134
Query: 272 SNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSF 319
N L +N V +SDFG+ + ++ +D + T T + + + S V+SF
Sbjct: 135 RNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 193
Query: 320 GIMLLEVFTRKK 331
G+++ EVF+ K
Sbjct: 194 GVLMWEVFSEGK 205
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 29/178 (16%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E +V EYMP G+L +C
Sbjct: 73 EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL 132
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH---- 298
LY + + A+EYL IH DL N L +N V ++DFG+++L+ + +
Sbjct: 133 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHA 189
Query: 299 ---FMIQTQTLATIGY----MASYVYSFGIMLLEVFTRK-KPTNKIFFSQRNDIKALG 348
F I+ ++ Y + S V++FG++L E+ T P I SQ D+ G
Sbjct: 190 GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKG 247
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 90/192 (46%), Gaps = 27/192 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ G FG + + + +VK + + ++F E ++MK+ + L+++ + +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 224 EDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI------------IHYDLKP 271
E+ ++ E+M +GSL L S L L D+S I IH DL+
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKL-IDFSAQIAEGMAYIERKNYIHRDLRA 137
Query: 272 SNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSF 319
+NVL ++++ ++DFG+A+ +I ++ + + I + A S V+SF
Sbjct: 138 ANVLVSESLMCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSF 196
Query: 320 GIMLLEVFTRKK 331
GI+L E+ T K
Sbjct: 197 GILLYEIVTYGK 208
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDF--ECDVMKSTCYRNLIKIISSR 221
I G FG +H ++ + ++K GA DF E +VM + L+++
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 222 SNEDFKVLVLEYMPRGSL------EKCLYSSN-YVGFAL---EYLHFDYSVLIIHYDLKP 271
+ LV E+M G L ++ L+++ +G L E + + +IH DL
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAA 131
Query: 272 SNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSF 319
N L +N V +SDFG+ + ++ +D + T T + + + S V+SF
Sbjct: 132 RNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 190
Query: 320 GIMLLEVFTRKK 331
G+++ EVF+ K
Sbjct: 191 GVLMWEVFSEGK 202
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDF--ECDVMKSTCYRNLIKIISSR 221
I G FG +H ++ + ++K GA DF E +VM + L+++
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 222 SNEDFKVLVLEYMPRGSL------EKCLYSSN-YVGFAL---EYLHFDYSVLIIHYDLKP 271
+ LV E+M G L ++ L+++ +G L E + + +IH DL
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAA 129
Query: 272 SNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSF 319
N L +N V +SDFG+ + ++ +D + T T + + + S V+SF
Sbjct: 130 RNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 188
Query: 320 GIMLLEVFTRKK 331
G+++ EVF+ K
Sbjct: 189 GVLMWEVFSEGK 200
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 34/199 (17%)
Query: 161 DNLISRGGFGSIHKARIQ--DRMEFSVKGFHLQCSGAFK---SFDFECDVMKSTCYRNLI 215
D ++ G FG + R++ + E SV L+ K F E +M + N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFDYSV 262
++ + ++V EYM GSL+ L + + ++YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DM 166
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---------IREDHFMIQTQTLATIGYM- 312
+H DL N+L + N+V +SDFG+A++L R I+ + I Y
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 313 ---ASYVYSFGIMLLEVFT 328
AS V+S+GI+L EV +
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDF--ECDVMKSTCYRNLIKIISSR 221
I G FG +H ++ + ++K GA DF E +VM + L+++
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 222 SNEDFKVLVLEYMPRGSL------EKCLYSSN-YVGFAL---EYLHFDYSVLIIHYDLKP 271
+ LV E+M G L ++ L+++ +G L E + + +IH DL
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAA 132
Query: 272 SNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSF 319
N L +N V +SDFG+ + ++ +D + T T + + + S V+SF
Sbjct: 133 RNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 191
Query: 320 GIMLLEVFTRKK 331
G+++ EVF+ K
Sbjct: 192 GVLMWEVFSEGK 203
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 45/209 (21%)
Query: 162 NLISRGGFGSIHKARIQD---RMEFSVKGFHLQCS-GAFKSFDFECDVM-KSTCYRNLIK 216
++I G FG + KARI+ RM+ ++K S + F E +V+ K + N+I
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 217 IISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYV----GFAL-----------EYLHFDYS 261
++ + + + L +EY P G+L L S + FA+ + LHF
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 262 VL----------IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGY 311
V IH DL N+L +N V ++DFG+++ ++ ++ +T + +
Sbjct: 141 VARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRW 197
Query: 312 MA------------SYVYSFGIMLLEVFT 328
MA S V+S+G++L E+ +
Sbjct: 198 MAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDF--ECDVMKSTCYRNLIKIISSR 221
I G FG +H ++ + ++K GA DF E +VM + L+++
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 222 SNEDFKVLVLEYMPRGSL------EKCLYSSN-YVGFAL---EYLHFDYSVLIIHYDLKP 271
+ LV E+M G L ++ L+++ +G L E + + +IH DL
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAA 131
Query: 272 SNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSF 319
N L +N V +SDFG+ + ++ +D + T T + + + S V+SF
Sbjct: 132 RNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 190
Query: 320 GIMLLEVFTRKK 331
G+++ EVF+ K
Sbjct: 191 GVLMWEVFSEGK 202
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 45/209 (21%)
Query: 162 NLISRGGFGSIHKARIQD---RMEFSVKGFHLQCS-GAFKSFDFECDVM-KSTCYRNLIK 216
++I G FG + KARI+ RM+ ++K S + F E +V+ K + N+I
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 217 IISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYV----GFAL-----------EYLHFDYS 261
++ + + + L +EY P G+L L S + FA+ + LHF
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 262 VL----------IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGY 311
V IH DL N+L +N V ++DFG+++ ++ ++ +T + +
Sbjct: 151 VARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRW 207
Query: 312 MA------------SYVYSFGIMLLEVFT 328
MA S V+S+G++L E+ +
Sbjct: 208 MAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 88/191 (46%), Gaps = 26/191 (13%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ +G FG + ++K + + ++F E VMK + L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 224 EDFKVLVLEYMPRGSL--------EKCLYSSNYVGFALEY---LHFDYSVLIIHYDLKPS 272
E + V+EYM +GSL K L V A + + + + +H DL+ +
Sbjct: 85 EPIYI-VIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 273 NVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSFG 320
N+L +N+V ++DFG+A+ LI ++ + + I + A S V+SFG
Sbjct: 144 NILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 321 IMLLEVFTRKK 331
I+L E+ T+ +
Sbjct: 203 ILLTELTTKGR 213
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 34/199 (17%)
Query: 161 DNLISRGGFGSIHKARIQ--DRMEFSVKGFHLQCSGAFK---SFDFECDVMKSTCYRNLI 215
D ++ G FG + R++ + E SV L+ K F E +M + N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFDYSV 262
++ + ++V EYM GSL+ L + + ++YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DM 166
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---------IREDHFMIQTQTLATIGYM- 312
+H DL N+L + N+V +SDFG++++L R I+ + I Y
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 313 ---ASYVYSFGIMLLEVFT 328
AS V+S+GI+L EV +
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 28/192 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ +G FG + ++K + + ++F E VMK + L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 224 EDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI------------IHYDLKP 271
E +V EYM +GSL L L L D S I +H DL+
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQL-VDMSAQIASGMAYVERMNYVHRDLRA 139
Query: 272 SNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSF 319
+N+L +N+V ++DFG+A+ LI ++ + + I + A S V+SF
Sbjct: 140 ANILVGENLVCKVADFGLAR-LIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 198
Query: 320 GIMLLEVFTRKK 331
GI+L E+ T+ +
Sbjct: 199 GILLTELTTKGR 210
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 34/199 (17%)
Query: 161 DNLISRGGFGSIHKARIQ--DRMEFSVKGFHLQCSGAFK---SFDFECDVMKSTCYRNLI 215
D ++ G FG + R++ + E SV L+ K F E +M + N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFDYSV 262
++ + ++V EYM GSL+ L + + ++YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DM 166
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---------IREDHFMIQTQTLATIGYM- 312
+H DL N+L + N+V +SDFG++++L R I+ + I Y
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 313 ---ASYVYSFGIMLLEVFT 328
AS V+S+GI+L EV +
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 28/192 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ +G FG + ++K + + ++F E VMK + L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 224 EDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI------------IHYDLKP 271
E +V EYM +GSL L L L D S I +H DL+
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQL-VDMSAQIASGMAYVERMNYVHRDLRA 139
Query: 272 SNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSF 319
+N+L +N+V ++DFG+A+ LI ++ + + I + A S V+SF
Sbjct: 140 ANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 198
Query: 320 GIMLLEVFTRKK 331
GI+L E+ T+ +
Sbjct: 199 GILLTELTTKGR 210
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQ--DRMEFSVKGFHLQCSGAFK---SFDFECDVMKSTCYR 212
S D ++ G FG + R++ + E SV L+ K F E +M +
Sbjct: 35 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 94
Query: 213 NLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFD 259
N+I++ + ++V EYM GSL+ L + + ++YL
Sbjct: 95 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS-- 152
Query: 260 YSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---------IREDHFMIQTQTLATIG 310
+ +H DL N+L + N+V +SDFG++++L R I+ + I
Sbjct: 153 -DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 211
Query: 311 YM----ASYVYSFGIMLLEVFT 328
Y AS V+S+GI+L EV +
Sbjct: 212 YRKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 34/199 (17%)
Query: 161 DNLISRGGFGSIHKARIQ--DRMEFSVKGFHLQCSGAFK---SFDFECDVMKSTCYRNLI 215
D ++ G FG + R++ + E SV L+ K F E +M + N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFDYSV 262
++ + ++V EYM GSL+ L + + ++YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DM 166
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---------IREDHFMIQTQTLATIGYM- 312
+H DL N+L + N+V +SDFG++++L R I+ + I Y
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 313 ---ASYVYSFGIMLLEVFT 328
AS V+S+GI+L EV +
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 34/199 (17%)
Query: 161 DNLISRGGFGSIHKARIQ--DRMEFSVKGFHLQCSGAFK---SFDFECDVMKSTCYRNLI 215
D ++ G FG + R++ + E SV L+ K F E +M + N+I
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFDYSV 262
++ + ++V EYM GSL+ L + + ++YL +
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DM 137
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---------IREDHFMIQTQTLATIGYM- 312
+H DL N+L + N+V +SDFG++++L R I+ + I Y
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 313 ---ASYVYSFGIMLLEVFT 328
AS V+S+GI+L EV +
Sbjct: 198 FTSASDVWSYGIVLWEVMS 216
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 34/199 (17%)
Query: 161 DNLISRGGFGSIHKARIQ--DRMEFSVKGFHLQCSGAFK---SFDFECDVMKSTCYRNLI 215
D ++ G FG + R++ + E SV L+ K F E +M + N+I
Sbjct: 48 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 107
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFDYSV 262
++ + ++V EYM GSL+ L + + ++YL +
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DM 164
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---------IREDHFMIQTQTLATIGYM- 312
+H DL N+L + N+V +SDFG++++L R I+ + I Y
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 224
Query: 313 ---ASYVYSFGIMLLEVFT 328
AS V+S+GI+L EV +
Sbjct: 225 FTSASDVWSYGIVLWEVMS 243
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 34/199 (17%)
Query: 161 DNLISRGGFGSIHKARIQ--DRMEFSVKGFHLQCSGAFK---SFDFECDVMKSTCYRNLI 215
D ++ G FG + R++ + E SV L+ K F E +M + N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFDYSV 262
++ + ++V EYM GSL+ L + + ++YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DM 166
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---------IREDHFMIQTQTLATIGYM- 312
+H DL N+L + N+V +SDFG++++L R I+ + I Y
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 313 ---ASYVYSFGIMLLEVFT 328
AS V+S+GI+L EV +
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 34/199 (17%)
Query: 161 DNLISRGGFGSIHKARIQ--DRMEFSVKGFHLQCSGAFK---SFDFECDVMKSTCYRNLI 215
D ++ G FG + R++ + E SV L+ K F E +M + N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFDYSV 262
++ + ++V EYM GSL+ L + + ++YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DM 166
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---------IREDHFMIQTQTLATIGYM- 312
+H DL N+L + N+V +SDFG++++L R I+ + I Y
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 313 ---ASYVYSFGIMLLEVFT 328
AS V+S+GI+L EV +
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 34/199 (17%)
Query: 161 DNLISRGGFGSIHKARIQ--DRMEFSVKGFHLQCSGAFK---SFDFECDVMKSTCYRNLI 215
D ++ G FG + R++ + E SV L+ K F E +M + N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFDYSV 262
++ + ++V EYM GSL+ L + + ++YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DM 166
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---------IREDHFMIQTQTLATIGYM- 312
+H DL N+L + N+V +SDFG+ ++L R I+ + I Y
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 313 ---ASYVYSFGIMLLEVFT 328
AS V+S+GI+L EV +
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 31/159 (19%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------- 248
+ F E +M + N+I++ + ++V EYM GSL+ L + +
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 249 -----VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQT 303
VG + YL + +H DL NVL D N+V +SDFG++++L +D T
Sbjct: 155 GMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL-EDDPDAAXT 210
Query: 304 QTLATIGYM--------------ASYVYSFGIMLLEVFT 328
T I AS V+SFG+++ EV
Sbjct: 211 TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 36/198 (18%)
Query: 164 ISRGGFGSIHKAR---IQDRMEFSVKGFHLQCSGAFKSFDF--ECDVMKSTCYRNLIKI- 217
+ +G FGS+ R + D V LQ SG + DF E ++K+ ++K
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 218 -ISSRSNEDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSVL 263
+S LV+EY+P G L + L S+ + +EYL S
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRR 131
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLL-IREDHFMIQTQTLATIGYMA--------- 313
+H DL N+L + ++DFG+AKLL + +D +++ + I + A
Sbjct: 132 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIF 191
Query: 314 ---SYVYSFGIMLLEVFT 328
S V+SFG++L E+FT
Sbjct: 192 SRQSDVWSFGVVLYELFT 209
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDF--ECDVMKSTCYRNLIKIISSR 221
I G FG +H ++ + ++K G+ DF E +VM + L+++
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK---EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 222 SNEDFKVLVLEYMPRGSL------EKCLYSSN-YVGFAL---EYLHFDYSVLIIHYDLKP 271
+ LV E+M G L ++ L+++ +G L E + + +IH DL
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAA 151
Query: 272 SNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSF 319
N L +N V +SDFG+ + ++ +D + T T + + + S V+SF
Sbjct: 152 RNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 210
Query: 320 GIMLLEVFTRKK 331
G+++ EVF+ K
Sbjct: 211 GVLMWEVFSEGK 222
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 26/191 (13%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ +G FG + ++K + + ++F E VMK + L+++ + S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 224 EDFKVLVLEYMPRGSL--------EKCLYSSNYVGFALEY---LHFDYSVLIIHYDLKPS 272
E +V EYM +GSL K L V A + + + + +H DL+ +
Sbjct: 78 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 136
Query: 273 NVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSFG 320
N+L +N+V ++DFG+A+ LI ++ + + I + A S V+SFG
Sbjct: 137 NILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 195
Query: 321 IMLLEVFTRKK 331
I+L E+ T+ +
Sbjct: 196 ILLTELTTKGR 206
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 26/191 (13%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ +G FG + ++K + + ++F E VMK + L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 224 EDFKVLVLEYMPRGSL--------EKCLYSSNYVGFALEY---LHFDYSVLIIHYDLKPS 272
E +V EYM +GSL K L V A + + + + +H DL+ +
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 273 NVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSFG 320
N+L +N+V ++DFG+A+ LI ++ + + I + A S V+SFG
Sbjct: 144 NILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 321 IMLLEVFTRKK 331
I+L E+ T+ +
Sbjct: 203 ILLTELTTKGR 213
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 26/191 (13%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ +G FG + ++K + + ++F E VMK + L+++ + S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 224 EDFKVLVLEYMPRGSL--------EKCLYSSNYVGFALEY---LHFDYSVLIIHYDLKPS 272
E + V EYM +GSL K L V A + + + + +H DL+ +
Sbjct: 74 EPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 132
Query: 273 NVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSFG 320
N+L +N+V ++DFG+A+ LI ++ + + I + A S V+SFG
Sbjct: 133 NILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 191
Query: 321 IMLLEVFTRKK 331
I+L E+ T+ +
Sbjct: 192 ILLTELTTKGR 202
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 27/159 (16%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYL 256
++F E VMK + L+++ + S E +V EYM +GSL L L L
Sbjct: 307 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQL 365
Query: 257 HFDYSVLI------------IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQ 304
D + I +H DL+ +N+L +N+V ++DFG+A+ LI ++ + +
Sbjct: 366 -VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQG 423
Query: 305 TLATIGYMA------------SYVYSFGIMLLEVFTRKK 331
I + A S V+SFGI+L E+ T+ +
Sbjct: 424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 26/191 (13%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ +G FG + ++K + + ++F E VMK + L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 224 EDFKVLVLEYMPRGSL--------EKCLYSSNYVGFALEY---LHFDYSVLIIHYDLKPS 272
E + V EYM +GSL K L V A + + + + +H DL+ +
Sbjct: 85 EPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 273 NVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSFG 320
N+L +N+V ++DFG+A+ LI ++ + + I + A S V+SFG
Sbjct: 144 NILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 321 IMLLEVFTRKK 331
I+L E+ T+ +
Sbjct: 203 ILLTELTTKGR 213
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 100/219 (45%), Gaps = 36/219 (16%)
Query: 136 LQGSISYSKWFSCLELCRVTNGFSEDNLISRGGFGSIHKARIQD-RMEFSVKGFHLQCSG 194
QGS +Y KW E+ R + + + G +G +++ + + +VK + +
Sbjct: 12 FQGSPNYDKW----EMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTM 64
Query: 195 AFKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC-------- 242
+ F E VMK + NL++++ + E ++ E+M G+L +C
Sbjct: 65 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 124
Query: 243 --LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH-- 298
LY + + A+EYL IH DL N L +N + ++DFG+++L+ + +
Sbjct: 125 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 181
Query: 299 -----FMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 182 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 26/191 (13%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ +G FG + ++K + + ++F E VMK + L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 224 EDFKVLVLEYMPRGSL--------EKCLYSSNYVGFALEY---LHFDYSVLIIHYDLKPS 272
E +V EYM +GSL K L V A + + + + +H DL+ +
Sbjct: 85 EPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 273 NVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSFG 320
N+L +N+V ++DFG+A+ LI ++ + + I + A S V+SFG
Sbjct: 144 NILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 321 IMLLEVFTRKK 331
I+L E+ T+ +
Sbjct: 203 ILLTELTTKGR 213
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 26/191 (13%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ +G FG + ++K + + ++F E VMK + L+++ + S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 224 EDFKVLVLEYMPRGSL--------EKCLYSSNYVGFALEY---LHFDYSVLIIHYDLKPS 272
E +V EYM +GSL K L V A + + + + +H DL+ +
Sbjct: 76 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 134
Query: 273 NVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSFG 320
N+L +N+V ++DFG+A+ LI ++ + + I + A S V+SFG
Sbjct: 135 NILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 193
Query: 321 IMLLEVFTRKK 331
I+L E+ T+ +
Sbjct: 194 ILLTELTTKGR 204
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 32/173 (18%)
Query: 184 SVKGFHLQCSGAFKS-FDFECDVMKSTCYRNLIKIISSRSNEDFKV--LVLEYMPRGSLE 240
+VK C +S + E +++++ + +++K ++ K LV+EY+P GSL
Sbjct: 41 AVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLR 100
Query: 241 KCLYSSNYVGFA------------LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFG 288
L + VG A + YLH + IH L NVL D++ + + DFG
Sbjct: 101 DYL-PRHCVGLAQLLLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFG 156
Query: 289 IAKLL--------IREDH----FMIQTQTLATIG-YMASYVYSFGIMLLEVFT 328
+AK + +RED F + L Y AS V+SFG+ L E+ T
Sbjct: 157 LAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 32/173 (18%)
Query: 184 SVKGFHLQCSGAFKS-FDFECDVMKSTCYRNLIKIISSRSNEDFKV--LVLEYMPRGSLE 240
+VK C +S + E +++++ + +++K ++ K LV+EY+P GSL
Sbjct: 42 AVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLR 101
Query: 241 KCLYSSNYVGFA------------LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFG 288
L + VG A + YLH + IH L NVL D++ + + DFG
Sbjct: 102 DYL-PRHCVGLAQLLLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFG 157
Query: 289 IAKLL--------IREDH----FMIQTQTLATIG-YMASYVYSFGIMLLEVFT 328
+AK + +RED F + L Y AS V+SFG+ L E+ T
Sbjct: 158 LAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 31/159 (19%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------- 248
+ F E +M + N+I++ + ++V EYM GSL+ L + +
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 249 -----VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQT 303
VG + YL + +H DL NVL D N+V +SDFG++++L +D T
Sbjct: 155 GMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL-EDDPDAAYT 210
Query: 304 QTLATIGYM--------------ASYVYSFGIMLLEVFT 328
T I AS V+SFG+++ EV
Sbjct: 211 TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 28/192 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ +G FG + ++K + + ++F E VMK + L+++ + S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 224 EDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI------------IHYDLKP 271
E + V EYM +GSL L L L D + I +H DL+
Sbjct: 75 EPIXI-VTEYMSKGSLLDFLKGETGKYLRLPQL-VDMAAQIASGMAYVERMNYVHRDLRA 132
Query: 272 SNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSF 319
+N+L +N+V ++DFG+A+ LI ++ + I + A S V+SF
Sbjct: 133 ANILVGENLVCKVADFGLAR-LIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 191
Query: 320 GIMLLEVFTRKK 331
GI+L E+ T+ +
Sbjct: 192 GILLTELTTKGR 203
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 159 SEDNLISRGGFGSIHKARIQ---DRMEFSVKGFHLQCSGAFKS-FDF--ECDVMKSTCYR 212
+ +I G FG ++K ++ + E V L+ K DF E +M +
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 213 NLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYL-HF 258
N+I++ S +++ EYM G+L+K L + + ++YL +
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 259 DYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFM---------IQTQTLATI 309
+Y +H DL N+L + N+V +SDFG++++L + I+ I
Sbjct: 167 NY----VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 310 GYM----ASYVYSFGIMLLEVFT 328
Y AS V+SFGI++ EV T
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 26/191 (13%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ +G FG + ++K + + ++F E VMK + L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 224 EDFKVLVLEYMPRGSL--------EKCLYSSNYVGFALEY---LHFDYSVLIIHYDLKPS 272
E + V+EYM +GSL K L V A + + + + +H DL+ +
Sbjct: 85 EPIYI-VIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 273 NVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSFG 320
N+L +N+V ++DFG+A+ LI ++ + I + A S V+SFG
Sbjct: 144 NILVGENLVCKVADFGLAR-LIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 321 IMLLEVFTRKK 331
I+L E+ T+ +
Sbjct: 203 ILLTELTTKGR 213
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 45/209 (21%)
Query: 162 NLISRGGFGSIHKARIQD---RMEFSVKGFHLQCS-GAFKSFDFECDVM-KSTCYRNLIK 216
++I G FG + KARI+ RM+ ++K S + F E +V+ K + N+I
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 217 IISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYV----GFAL-----------EYLHFDYS 261
++ + + + L +EY P G+L L S + FA+ + LHF
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 262 VL----------IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGY 311
V IH +L N+L +N V ++DFG+++ ++ ++ +T + +
Sbjct: 148 VARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRW 204
Query: 312 MA------------SYVYSFGIMLLEVFT 328
MA S V+S+G++L E+ +
Sbjct: 205 MAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 27/159 (16%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYL 256
++F E VMK + L+++ + S E +V EYM +GSL L L L
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 257 HFDYSVLI------------IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQ 304
D + I +H DL+ +N+L +N+V ++DFG+A+ LI ++ + +
Sbjct: 283 -VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQG 340
Query: 305 TLATIGYMA------------SYVYSFGIMLLEVFTRKK 331
I + A S V+SFGI+L E+ T+ +
Sbjct: 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 93/202 (46%), Gaps = 30/202 (14%)
Query: 161 DNLISRGGFGSIHKA----RIQDRMEFSVKGF-HLQCSGAFKSFDFECDVMKSTCYRNLI 215
D +I +G FG ++ + Q+R++ ++K + ++F E +M+ + N++
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 216 KIIS-SRSNEDFKVLVLEYMPRGSLEKCLYS-------SNYVGFALEY---LHFDYSVLI 264
+I E ++L YM G L + + S + + F L+ + +
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKF 145
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQT-------------QTLATIGY 311
+H DL N + D++ ++DFG+A+ ++ +++ +Q ++L T +
Sbjct: 146 VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRF 205
Query: 312 MA-SYVYSFGIMLLEVFTRKKP 332
S V+SFG++L E+ TR P
Sbjct: 206 TTKSDVWSFGVLLWELLTRGAP 227
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 27/159 (16%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYL 256
++F E VMK + L+++ + S E +V EYM +GSL L L L
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 257 HFDYSVLI------------IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQ 304
D + I +H DL+ +N+L +N+V ++DFG+A+ LI ++ + +
Sbjct: 283 -VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQG 340
Query: 305 TLATIGYMA------------SYVYSFGIMLLEVFTRKK 331
I + A S V+SFGI+L E+ T+ +
Sbjct: 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 26/191 (13%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ +G FG + ++K + + ++F E VMK + L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 224 EDFKVLVLEYMPRGSL--------EKCLYSSNYVGFALEY---LHFDYSVLIIHYDLKPS 272
E + V+EYM +G L K L V A + + + + +H DL+ +
Sbjct: 85 EPIYI-VMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 273 NVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSFG 320
N+L +N+V ++DFG+A+ LI ++ + + I + A S V+SFG
Sbjct: 144 NILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 321 IMLLEVFTRKK 331
I+L E+ T+ +
Sbjct: 203 ILLTELTTKGR 213
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 84/208 (40%), Gaps = 42/208 (20%)
Query: 161 DNLISRGGFGSIHKA-RIQDRMEFSVKGFH----LQCSGAFKSFDFECDVMKSTCYRNLI 215
+ +I GGFG +++A I D E +VK S ++ E + + N+I
Sbjct: 12 EEIIGIGGFGKVYRAFWIGD--EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSN-----------YVGFALEYLHFDYSVLI 264
+ E LV+E+ G L + L + + YLH + V I
Sbjct: 70 ALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPI 129
Query: 265 IHYDLKPSNVLFDD--------NIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA--- 313
IH DLK SN+L N + ++DFG+A RE H + +MA
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLA----REWHRTTKMSAAGAYAWMAPEV 185
Query: 314 ---------SYVYSFGIMLLEVFTRKKP 332
S V+S+G++L E+ T + P
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 26/191 (13%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ +G FG + ++K + + ++F E VMK + L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 224 EDFKVLVLEYMPRGSL--------EKCLYSSNYVGFALEY---LHFDYSVLIIHYDLKPS 272
E + V EYM +GSL K L V A + + + + +H DL +
Sbjct: 85 EPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAA 143
Query: 273 NVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSFG 320
N+L +N+V ++DFG+A+ LI ++ + + I + A S V+SFG
Sbjct: 144 NILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 321 IMLLEVFTRKK 331
I+L E+ T+ +
Sbjct: 203 ILLTELTTKGR 213
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 29/155 (18%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL-----EKCLYSSNYVGF----- 251
E D++ + ++K+ + E L+L+++ G L ++ +++ V F
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 135
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATI 309
AL++LH S+ II+ DLKP N+L D+ L+DFG++K I DH T+
Sbjct: 136 ALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTV 190
Query: 310 GYMASYV------------YSFGIMLLEVFTRKKP 332
YMA V +SFG+++ E+ T P
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 31/154 (20%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVL--VLEYMPRGSLEKCLYSSNYVGFA------- 252
E D++++ + ++IK + L V+EY+P GSL L + +G A
Sbjct: 83 EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQ 141
Query: 253 -----LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL--------IREDH- 298
+ YLH + IH DL NVL D++ + + DFG+AK + +RED
Sbjct: 142 QICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGD 198
Query: 299 ---FMIQTQTLATIG-YMASYVYSFGIMLLEVFT 328
F + L Y AS V+SFG+ L E+ T
Sbjct: 199 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 29/155 (18%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL-----EKCLYSSNYVGF----- 251
E D++ + ++K+ + E L+L+++ G L ++ +++ V F
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 136
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATI 309
AL++LH S+ II+ DLKP N+L D+ L+DFG++K I DH T+
Sbjct: 137 ALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTV 191
Query: 310 GYMASYV------------YSFGIMLLEVFTRKKP 332
YMA V +SFG+++ E+ T P
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 29/155 (18%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL-----EKCLYSSNYVGF----- 251
E D++ + ++K+ + E L+L+++ G L ++ +++ V F
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 135
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATI 309
AL++LH S+ II+ DLKP N+L D+ L+DFG++K I DH T+
Sbjct: 136 ALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTV 190
Query: 310 GYMASYV------------YSFGIMLLEVFTRKKP 332
YMA V +SFG+++ E+ T P
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 26/191 (13%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ G FG + + ++K + + +SF E +MK + L+++ + S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 224 EDFKVLVLEYMPRGSL--------EKCLYSSNYVGFALEY---LHFDYSVLIIHYDLKPS 272
E +V EYM +GSL + L N V A + + + + IH DL+ +
Sbjct: 76 EPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSA 134
Query: 273 NVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSFG 320
N+L + ++ ++DFG+A+ LI ++ + I + A S V+SFG
Sbjct: 135 NILVGNGLICKIADFGLAR-LIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 193
Query: 321 IMLLEVFTRKK 331
I+L E+ T+ +
Sbjct: 194 ILLTELVTKGR 204
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+++ +I G FG +++A++ D E LQ AFK + E +M+ + N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-GKAFK--NRELQIMRKLDHCNIVRL 78
Query: 218 ------ISSRSNEDFKVLVLEYMPRGSLE------------KCLYSSNYVGFALEYLHFD 259
+ +E + LVL+Y+P +Y Y+ L +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIR 295
+S I H D+KP N+L D D V L DFG AK L+R
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+++ +I G FG +++A++ D E LQ AFK + E +M+ + N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-GKAFK--NRELQIMRKLDHCNIVRL 78
Query: 218 ------ISSRSNEDFKVLVLEYMPRGSLE------------KCLYSSNYVGFALEYLHFD 259
+ +E + LVL+Y+P +Y Y+ L +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIR 295
+S I H D+KP N+L D D V L DFG AK L+R
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 138 GSISYSKWFSCLELCRVTNGFSEDNLISRGGFGSIHKARIQD-RMEFSVKGFHLQCSGAF 196
GS +Y KW E+ R + + + G +G +++ + + +VK + +
Sbjct: 1 GSPNYDKW----EMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEV 53
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E +++E+M G+L +C
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH---- 298
LY + + A+EYL IH DL N L +N + ++DFG+++L+ + +
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 299 ---FMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 27/159 (16%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYL 256
++F E VMK + L+++ + S E +V EYM +GSL L L L
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 257 HFDYSVLI------------IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQ 304
D + I +H DL+ +N+L +N+V ++DFG+A+ LI ++ + +
Sbjct: 283 -VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQG 340
Query: 305 TLATIGYMA------------SYVYSFGIMLLEVFTRKK 331
I + A S V+SFGI+L E+ T+ +
Sbjct: 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 138 GSISYSKWFSCLELCRVTNGFSEDNLISRGGFGSIHKARIQD-RMEFSVKGFHLQCSGAF 196
GS +Y KW E+ R + + + G +G +++ + + +VK + +
Sbjct: 1 GSPNYDKW----EMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEV 53
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E +++E+M G+L +C
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH---- 298
LY + + A+EYL IH DL N L +N + ++DFG+++L+ + +
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 299 ---FMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+++ +I G FG +++A++ D E LQ AFK + E +M+ + N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-GKAFK--NRELQIMRKLDHCNIVRL 78
Query: 218 ------ISSRSNEDFKVLVLEYMPRGSLE------------KCLYSSNYVGFALEYLHFD 259
+ +E + LVL+Y+P +Y Y+ L +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIR 295
+S I H D+KP N+L D D V L DFG AK L+R
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 26/191 (13%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ +G FG + ++K + + ++F E VMK + L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 224 EDFKVLVLEYMPRGSL--------EKCLYSSNYVGFALEY---LHFDYSVLIIHYDLKPS 272
E + V EYM +G L K L V A + + + + +H DL+ +
Sbjct: 85 EPIYI-VTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 273 NVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSFG 320
N+L +N+V ++DFG+A+ LI ++ + + I + A S V+SFG
Sbjct: 144 NILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 321 IMLLEVFTRKK 331
I+L E+ T+ +
Sbjct: 203 ILLTELTTKGR 213
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 34/199 (17%)
Query: 161 DNLISRGGFGSIHKARIQ--DRMEFSVKGFHLQCSGAFK---SFDFECDVMKSTCYRNLI 215
D ++ G FG + R++ + E SV L+ K F E +M + N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFDYSV 262
++ + ++V E M GSL+ L + + ++YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DM 166
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---------IREDHFMIQTQTLATIGYM- 312
+H DL N+L + N+V +SDFG++++L R I+ + I Y
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 313 ---ASYVYSFGIMLLEVFT 328
AS V+S+GI+L EV +
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 85/201 (42%), Gaps = 32/201 (15%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
I G FG+++K + + + F++F E V++ T + N++ + +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 224 EDFKVLVLEYMPRGSLEKCLYS-------------SNYVGFALEYLHFDYSVLIIHYDLK 270
++ +V ++ SL K L+ + ++YLH + IIH D+K
Sbjct: 104 DNL-AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMK 159
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------------SY 315
+N+ + + + DFG+A + R Q ++ +MA S
Sbjct: 160 SNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSD 219
Query: 316 VYSFGIMLLEVFTRKKPTNKI 336
VYS+GI+L E+ T + P + I
Sbjct: 220 VYSYGIVLYELMTGELPYSHI 240
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 25/158 (15%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL--------EKCLYSSNY 248
++F E VMK + L+++ + S E +V EYM +GSL K L
Sbjct: 225 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL 283
Query: 249 VGFALEY---LHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
V A + + + + +H DL+ +N+L +N+V ++DFG+ + LI ++ + +
Sbjct: 284 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGR-LIEDNEYTARQGA 342
Query: 306 LATIGYMA------------SYVYSFGIMLLEVFTRKK 331
I + A S V+SFGI+L E+ T+ +
Sbjct: 343 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 380
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 25/174 (14%)
Query: 164 ISRGGFGSIHKARIQDR---MEFSVKGFHLQCSGA-FKSFDFECDVMKSTCYRNLIKIIS 219
+ G FG +H +++R +E +K + S + + E +V+KS + N+IKI
Sbjct: 30 LGSGAFGDVH--LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE 87
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALE-------------YLHFDYSVLIIH 266
+ +V+E G L + + S+ G AL L + +S ++H
Sbjct: 88 VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVH 147
Query: 267 YDLKPSNVLFDD---NIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYVY 317
DLKP N+LF D + + DFG+A+L ++H T T YMA V+
Sbjct: 148 KDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAPEVF 198
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 34/199 (17%)
Query: 161 DNLISRGGFGSIHKARIQ--DRMEFSVKGFHLQCSGAFK---SFDFECDVMKSTCYRNLI 215
D ++ G FG + R++ + E SV L+ K F E +M + N+I
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFDYSV 262
++ + ++V E M GSL+ L + + ++YL +
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DM 137
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---------IREDHFMIQTQTLATIGYM- 312
+H DL N+L + N+V +SDFG++++L R I+ + I Y
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 313 ---ASYVYSFGIMLLEVFT 328
AS V+S+GI+L EV +
Sbjct: 198 FTSASDVWSYGIVLWEVMS 216
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 34/199 (17%)
Query: 161 DNLISRGGFGSIHKARIQ--DRMEFSVKGFHLQCSGAFK---SFDFECDVMKSTCYRNLI 215
D ++ G FG + R++ + E SV L+ K F E +M + N+I
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFDYSV 262
++ + ++V E M GSL+ L + + ++YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DM 166
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---------IREDHFMIQTQTLATIGYM- 312
+H DL N+L + N+V +SDFG++++L R I+ + I Y
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 313 ---ASYVYSFGIMLLEVFT 328
AS V+S+GI+L EV +
Sbjct: 227 FTSASDVWSYGIVLWEVMS 245
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 36/217 (16%)
Query: 138 GSISYSKWFSCLELCRVTNGFSEDNLISRGGFGSIHKARIQD-RMEFSVKGFHLQCSGAF 196
GS +Y KW E+ R + + + G +G +++ + + +VK + +
Sbjct: 1 GSPNYDKW----EMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEV 53
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E ++ E+M G+L +C
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH---- 298
LY + + A+EYL IH DL N L +N + ++DFG+++L+ + +
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 299 ---FMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 36/217 (16%)
Query: 138 GSISYSKWFSCLELCRVTNGFSEDNLISRGGFGSIHKARIQD-RMEFSVKGFHLQCSGAF 196
GS +Y KW E+ R + + + G +G +++ + + +VK + +
Sbjct: 1 GSPNYDKW----EMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEV 53
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E ++ E+M G+L +C
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH---- 298
LY + + A+EYL IH DL N L +N + ++DFG+++L+ + +
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 299 ---FMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 89/217 (41%), Gaps = 52/217 (23%)
Query: 164 ISRGGFGSIHKA---RIQDRMEFSVKGFHLQCSGA----FKSFDFECDVMKSTCYRNLIK 216
+ G FG + KA ++ R ++ + A + E +V+K + ++IK
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 217 IISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVG-------------------------- 250
+ + S + +L++EY GSL L S VG
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 251 ----FALEY---LHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQT 303
FA + + + + ++H DL N+L + +SDFG+++ + ED ++ ++
Sbjct: 151 DLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRS 210
Query: 304 QTLATIGYMA------------SYVYSFGIMLLEVFT 328
Q + +MA S V+SFG++L E+ T
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 34/203 (16%)
Query: 164 ISRGGFGSIHKARIQDRMEFSV-KGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRS 222
+ G FG ++KA+ ++ + K + + + E D++ S + N++K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 223 NEDFKVLVLEYMPRGS-------LEKCLYSSNYVGF------ALEYLHFDYSVLIIHYDL 269
E+ +++E+ G+ LE+ L S AL YLH + IIH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK---IIHRDL 161
Query: 270 KPSNVLFDDNIVTHLSDFGIA----KLLIREDHF------------MIQTQTLATIGYMA 313
K N+LF + L+DFG++ + + R D F M +T Y A
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA 221
Query: 314 SYVYSFGIMLLEVFTRKKPTNKI 336
V+S GI L+E+ + P +++
Sbjct: 222 D-VWSLGITLIEMAEIEPPHHEL 243
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 167 GGFGSIHKAR-IQDRMEFSVKGFHLQCSGA---FKSFDFECDVMKSTCYRNLIKIISSRS 222
GG +H AR ++D + +VK + + F E + + ++ + +
Sbjct: 23 GGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGE 82
Query: 223 NED----FKVLVLEYMPRGSLEKCLYSSN---------YVGFALEYLHFDYSVLIIHYDL 269
E +V+EY+ +L +++ + A + L+F + IIH D+
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV 142
Query: 270 KPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT-LATIGYMA------------SYV 316
KP+N+L + DFGIA+ + + + QT + T Y++ S V
Sbjct: 143 KPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 317 YSFGIMLLEVFTRKKP 332
YS G +L EV T + P
Sbjct: 203 YSLGCVLYEVLTGEPP 218
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 34/203 (16%)
Query: 164 ISRGGFGSIHKARIQDRMEFSV-KGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRS 222
+ G FG ++KA+ ++ + K + + + E D++ S + N++K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 223 NEDFKVLVLEYMPRGS-------LEKCLYSSNYVGF------ALEYLHFDYSVLIIHYDL 269
E+ +++E+ G+ LE+ L S AL YLH + IIH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK---IIHRDL 161
Query: 270 KPSNVLFDDNIVTHLSDFGIA----KLLIREDHF------------MIQTQTLATIGYMA 313
K N+LF + L+DFG++ + + R D F M +T Y A
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKA 221
Query: 314 SYVYSFGIMLLEVFTRKKPTNKI 336
V+S GI L+E+ + P +++
Sbjct: 222 D-VWSLGITLIEMAEIEPPHHEL 243
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 34/203 (16%)
Query: 164 ISRGGFGSIHKARIQDRMEFSV-KGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRS 222
+ G FG ++KA+ ++ + K + + + E D++ S + N++K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 223 NEDFKVLVLEYMPRGS-------LEKCLYSSNYVGF------ALEYLHFDYSVLIIHYDL 269
E+ +++E+ G+ LE+ L S AL YLH + IIH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK---IIHRDL 161
Query: 270 KPSNVLFDDNIVTHLSDFGIA----KLLIREDHF------------MIQTQTLATIGYMA 313
K N+LF + L+DFG++ + + R D F M +T Y A
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA 221
Query: 314 SYVYSFGIMLLEVFTRKKPTNKI 336
V+S GI L+E+ + P +++
Sbjct: 222 D-VWSLGITLIEMAEIEPPHHEL 243
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 90/224 (40%), Gaps = 67/224 (29%)
Query: 162 NLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYR-------NL 214
LI RG +G+++K + +R +VK F F + + YR N+
Sbjct: 19 ELIGRGRYGAVYKGSLDER-PVAVKVFSFANRQNF--------INEKNIYRVPLMEHDNI 69
Query: 215 IKII--SSRSNEDFKV---LVLEYMPRGSLEK--CLYSSNYVGF---------ALEYLHF 258
+ I R D ++ LV+EY P GSL K L++S++V L YLH
Sbjct: 70 ARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHT 129
Query: 259 D------YSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLI--------REDHFMIQTQ 304
+ Y I H DL NVL ++ +SDFG++ L ED+ I
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI--S 187
Query: 305 TLATIGYMASYV-------------------YSFGIMLLEVFTR 329
+ TI YMA V Y+ G++ E+F R
Sbjct: 188 EVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR 231
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 29/155 (18%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL-----EKCLYSSNYVGF----- 251
E D++ + ++K+ + E L+L+++ G L ++ +++ V F
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 139
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATI 309
L++LH S+ II+ DLKP N+L D+ L+DFG++K I DH T+
Sbjct: 140 ALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAI--DHEKKAYSFCGTV 194
Query: 310 GYMASYV------------YSFGIMLLEVFTRKKP 332
YMA V +S+G+++ E+ T P
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 23/190 (12%)
Query: 164 ISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRS 222
I +G G+++ A + E +++ +LQ + E VM+ N++ + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 223 NEDFKVLVLEYMPRGSL-----EKCLYSSNYVGFA---LEYLHFDYSVLIIHYDLKPSNV 274
D +V+EY+ GSL E C+ L+ L F +S +IH D+K N+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNI 147
Query: 275 LFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV------------YSFGIM 322
L + L+DFG + E +++ + T +MA V +S GIM
Sbjct: 148 LLGMDGSVKLTDFGFCAQITPEQSK--RSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 205
Query: 323 LLEVFTRKKP 332
+E+ + P
Sbjct: 206 AIEMIEGEPP 215
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 28/157 (17%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E +++E+M G+L +C
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH---- 298
LY + + A+EYL IH DL N L +N + ++DFG+++L+ + +
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
Query: 299 ---FMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 34/198 (17%)
Query: 167 GGFGSIHKAR-IQDRMEFSVKGFHLQCSGA---FKSFDFECDVMKSTCYRNLIKIISSRS 222
GG +H AR ++D + +VK + + F E + + ++ + +
Sbjct: 23 GGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGE 82
Query: 223 NED----FKVLVLEYMPRGSLEKCLYSSN---------YVGFALEYLHFDYSVLIIHYDL 269
E +V+EY+ +L +++ + A + L+F + IIH D+
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV 142
Query: 270 KPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIG---YMA------------S 314
KP+N++ + DFGIA+ + D TQT A IG Y++ S
Sbjct: 143 KPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 315 YVYSFGIMLLEVFTRKKP 332
VYS G +L EV T + P
Sbjct: 201 DVYSLGCVLYEVLTGEPP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 34/198 (17%)
Query: 167 GGFGSIHKAR-IQDRMEFSVKGFHLQCSGA---FKSFDFECDVMKSTCYRNLIKIISSRS 222
GG +H AR ++D + +VK + + F E + + ++ + +
Sbjct: 23 GGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGE 82
Query: 223 NED----FKVLVLEYMPRGSLEKCLYSSN---------YVGFALEYLHFDYSVLIIHYDL 269
E +V+EY+ +L +++ + A + L+F + IIH D+
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV 142
Query: 270 KPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIG---YMA------------S 314
KP+N++ + DFGIA+ + D TQT A IG Y++ S
Sbjct: 143 KPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 315 YVYSFGIMLLEVFTRKKP 332
VYS G +L EV T + P
Sbjct: 201 DVYSLGCVLYEVLTGEPP 218
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+++ +I G FG +++A++ D E LQ FK+ + + +M+ + N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQ--IMRKLDHCNIVRL 78
Query: 218 ------ISSRSNEDFKVLVLEYMPRGSLE------------KCLYSSNYVGFALEYLHFD 259
+ +E + LVL+Y+P +Y Y+ L +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIR 295
+S I H D+KP N+L D D V L DFG AK L+R
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+++ +I G FG +++A++ D E LQ FK+ + + +M+ + N++++
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQ--IMRKLDHCNIVRL 82
Query: 218 ------ISSRSNEDFKVLVLEYMPRGSLE------------KCLYSSNYVGFALEYLHFD 259
+ +E + LVL+Y+P +Y Y+ L +
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIR 295
+S I H D+KP N+L D D V L DFG AK L+R
Sbjct: 143 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 179
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 22/157 (14%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+++ +I G FG +++A++ D E LQ FK + E +M+ + N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFK--NRELQIMRKLDHCNIVRL 78
Query: 218 ------ISSRSNEDFKVLVLEYMPRGSLE------------KCLYSSNYVGFALEYLHFD 259
+ +E + LVL+Y+P +Y Y+ L +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIR 295
+S I H D+KP N+L D D V L DFG AK L+R
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+++ +I G FG +++A++ D E LQ FK+ + + +M+ + N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQ--IMRKLDHCNIVRL 78
Query: 218 ------ISSRSNEDFKVLVLEYMPRGSLE------------KCLYSSNYVGFALEYLHFD 259
+ +E + LVL+Y+P +Y Y+ L +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIR 295
+S I H D+KP N+L D D V L DFG AK L+R
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+++ +I G FG +++A++ D E LQ FK+ + + +M+ + N++++
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQ--IMRKLDHCNIVRL 79
Query: 218 ------ISSRSNEDFKVLVLEYMPRGSLE------------KCLYSSNYVGFALEYLHFD 259
+ +E + LVL+Y+P +Y Y+ L +
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 139
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIR 295
+S I H D+KP N+L D D V L DFG AK L+R
Sbjct: 140 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 176
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 28/157 (17%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E +++E+M G+L +C
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRED----- 297
LY + + A+EYL IH DL N L +N + ++DFG+++L+ +
Sbjct: 115 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 171
Query: 298 --HFMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 172 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 28/157 (17%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E +++E+M G+L +C
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRED----- 297
LY + + A+EYL IH DL N L +N + ++DFG+++L+ +
Sbjct: 112 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 168
Query: 298 --HFMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 169 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 30/201 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSV-KGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRS 222
+ G FG ++KA+ ++ + K + + + E +++ + + ++K++ +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 223 NEDFKVLVLEYMPRGSLEKCLYSSNYVGFA-----------LEYLHFDYSVLIIHYDLKP 271
++ +++E+ P G+++ + + G LE L+F +S IIH DLK
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDR-GLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKA 137
Query: 272 SNVLFDDNIVTHLSDFGIA----KLLIREDHF------------MIQTQTLATIGYMASY 315
NVL L+DFG++ K L + D F M +T Y A
Sbjct: 138 GNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKAD- 196
Query: 316 VYSFGIMLLEVFTRKKPTNKI 336
++S GI L+E+ + P +++
Sbjct: 197 IWSLGITLIEMAQIEPPHHEL 217
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+++ +I G FG +++A++ D E LQ FK+ + + +M+ + N++++
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQ--IMRKLDHCNIVRL 83
Query: 218 ------ISSRSNEDFKVLVLEYMPRGSLE------------KCLYSSNYVGFALEYLHFD 259
+ +E + LVL+Y+P +Y Y+ L +
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 143
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIR 295
+S I H D+KP N+L D D V L DFG AK L+R
Sbjct: 144 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 180
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+++ +I G FG +++A++ D E LQ FK+ + + +M+ + N++++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQ--IMRKLDHCNIVRL 90
Query: 218 ------ISSRSNEDFKVLVLEYMPRGSLE------------KCLYSSNYVGFALEYLHFD 259
+ +E + LVL+Y+P +Y Y+ L +
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIR 295
+S I H D+KP N+L D D V L DFG AK L+R
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 187
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+++ +I G FG +++A++ D E LQ FK+ + + +M+ + N++++
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQ--IMRKLDHCNIVRL 97
Query: 218 ------ISSRSNEDFKVLVLEYMPRGSLE------------KCLYSSNYVGFALEYLHFD 259
+ +E + LVL+Y+P +Y Y+ L +
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 157
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIR 295
+S I H D+KP N+L D D V L DFG AK L+R
Sbjct: 158 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 194
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+++ +I G FG +++A++ D E LQ FK+ + + +M+ + N++++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQ--IMRKLDHCNIVRL 90
Query: 218 ------ISSRSNEDFKVLVLEYMPRGSLE------------KCLYSSNYVGFALEYLHFD 259
+ +E + LVL+Y+P +Y Y+ L +
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIR 295
+S I H D+KP N+L D D V L DFG AK L+R
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 187
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 28/157 (17%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E ++ E+M G+L +C
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH---- 298
LY + + A+EYL IH DL N L +N + ++DFG+++L+ + +
Sbjct: 115 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPA 171
Query: 299 ---FMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 172 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+++ +I G FG +++A++ D E LQ FK+ + + +M+ + N++++
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQ--IMRKLDHCNIVRL 86
Query: 218 ------ISSRSNEDFKVLVLEYMPRGSLE------------KCLYSSNYVGFALEYLHFD 259
+ +E + LVL+Y+P +Y Y+ L +
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 146
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIR 295
+S I H D+KP N+L D D V L DFG AK L+R
Sbjct: 147 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 183
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+++ +I G FG +++A++ D E LQ FK+ + + +M+ + N++++
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQ--IMRKLDHCNIVRL 91
Query: 218 ------ISSRSNEDFKVLVLEYMPRGSLE------------KCLYSSNYVGFALEYLHFD 259
+ +E + LVL+Y+P +Y Y+ L +
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 151
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIR 295
+S I H D+KP N+L D D V L DFG AK L+R
Sbjct: 152 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 188
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 28/157 (17%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E ++ E+M G+L +C
Sbjct: 58 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 117
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH---- 298
LY + + A+EYL IH DL N L +N + ++DFG+++L+ + +
Sbjct: 118 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 174
Query: 299 ---FMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 175 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 28/157 (17%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E ++ E+M G+L +C
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH---- 298
LY + + A+EYL IH DL N L +N + ++DFG+++L+ + +
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
Query: 299 ---FMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 28/157 (17%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E ++ E+M G+L +C
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH---- 298
LY + + A+EYL IH DL N L +N + ++DFG+++L+ + +
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
Query: 299 ---FMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 28/157 (17%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E ++ E+M G+L +C
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH---- 298
LY + + A+EYL IH DL N L +N + ++DFG+++L+ + +
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 299 ---FMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 28/157 (17%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E ++ E+M G+L +C
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH---- 298
LY + + A+EYL IH DL N L +N + ++DFG+++L+ + +
Sbjct: 116 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPA 172
Query: 299 ---FMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 173 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 96/222 (43%), Gaps = 38/222 (17%)
Query: 154 VTNGFSEDNLISRGGFGSIHKAR-IQDRMEFSVKGFHLQCSGA-------FKSFDFECDV 205
N + I +GGFG +HK R ++D+ ++K L S F+ F E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 206 MKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFA 252
M + + N++K+ N +V+E++P G L L + +
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 253 LEYLHFDYSVLIIHYDLKPSNVL---FDDN--IVTHLSDFGIAKLLIREDHFMI---QTQ 304
+EY+ + + I+H DL+ N+ D+N + ++DFG+++ + ++ Q
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWM 193
Query: 305 TLATIGY-MASY-----VYSFGIMLLEVFTRKKPTNKIFFSQ 340
TIG SY YSF ++L + T + P ++ + +
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK 235
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 28/157 (17%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E ++ E+M G+L +C
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH---- 298
LY + + A+EYL IH DL N L +N + ++DFG+++L+ + +
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 299 ---FMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+++ +I G FG +++A++ D E LQ FK+ + + +M+ + N++++
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQ--IMRKLDHCNIVRL 106
Query: 218 ------ISSRSNEDFKVLVLEYMPRG--------SLEKCLYSSNYVGF-------ALEYL 256
+ +E + LVL+Y+P S K YV +L Y+
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 166
Query: 257 HFDYSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIR 295
H S I H D+KP N+L D D V L DFG AK L+R
Sbjct: 167 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 203
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 23/190 (12%)
Query: 164 ISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRS 222
I +G G+++ A + E +++ +LQ + E VM+ N++ + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 223 NEDFKVLVLEYMPRGSL-----EKCLYSSNYVGFA---LEYLHFDYSVLIIHYDLKPSNV 274
D +V+EY+ GSL E C+ L+ L F +S +IH D+K N+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNI 148
Query: 275 LFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV------------YSFGIM 322
L + L+DFG + E ++ + T +MA V +S GIM
Sbjct: 149 LLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 206
Query: 323 LLEVFTRKKP 332
+E+ + P
Sbjct: 207 AIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 23/190 (12%)
Query: 164 ISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRS 222
I +G G+++ A + E +++ +LQ + E VM+ N++ + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 223 NEDFKVLVLEYMPRGSL-----EKCLYSSNYVGFA---LEYLHFDYSVLIIHYDLKPSNV 274
D +V+EY+ GSL E C+ L+ L F +S +IH D+K N+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNI 147
Query: 275 LFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV------------YSFGIM 322
L + L+DFG + E ++ + T +MA V +S GIM
Sbjct: 148 LLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 205
Query: 323 LLEVFTRKKP 332
+E+ + P
Sbjct: 206 AIEMIEGEPP 215
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+++ +I G FG +++A++ D E LQ FK+ + + +M+ + N++++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQ--IMRKLDHCNIVRL 112
Query: 218 ------ISSRSNEDFKVLVLEYMPRG--------SLEKCLYSSNYVGF-------ALEYL 256
+ +E + LVL+Y+P S K YV +L Y+
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 257 HFDYSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIR 295
H S I H D+KP N+L D D V L DFG AK L+R
Sbjct: 173 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 28/157 (17%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E ++ E+M G+L +C
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 118
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH---- 298
LY + + A+EYL IH DL N L +N + ++DFG+++L+ + +
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
Query: 299 ---FMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+++ +I G FG +++A++ D E LQ FK+ + + +M+ + N++++
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQ--IMRKLDHCNIVRL 114
Query: 218 ------ISSRSNEDFKVLVLEYMPRG--------SLEKCLYSSNYVGF-------ALEYL 256
+ +E + LVL+Y+P S K YV +L Y+
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 174
Query: 257 HFDYSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIR 295
H S I H D+KP N+L D D V L DFG AK L+R
Sbjct: 175 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 211
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+++ +I G FG +++A++ D E LQ FK+ + + +M+ + N++++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQ--IMRKLDHCNIVRL 112
Query: 218 ------ISSRSNEDFKVLVLEYMPRG--------SLEKCLYSSNYVGF-------ALEYL 256
+ +E + LVL+Y+P S K YV +L Y+
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 257 HFDYSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIR 295
H S I H D+KP N+L D D V L DFG AK L+R
Sbjct: 173 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 48/106 (45%), Gaps = 8/106 (7%)
Query: 51 PPQQENLS------LASNELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVK 104
PP N S L+ N L IPS+ +L + L L LN L G IP E+ +K L
Sbjct: 408 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 467
Query: 105 IYFSMNNFAGVIPNAIGCLNILQHLFLGYNRLQGSISYSKWFSCLE 150
+ N+ G IP+ + L + L NRL G I KW LE
Sbjct: 468 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI--PKWIGRLE 511
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%)
Query: 55 ENLSLASNELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAG 114
E L L N+L IPS N ++ +++LS N LTG IP I L+ L + S N+F+G
Sbjct: 466 ETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSG 525
Query: 115 VIPNAIGCLNILQHLFLGYNRLQGSI 140
IP +G L L L N G+I
Sbjct: 526 NIPAELGDCRSLIWLDLNTNLFNGTI 551
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 6/122 (4%)
Query: 25 KAVTNITFGLLVFIILCPRYNYPPL----RPPQQ--ENLSLASNELISVIPSTFWNLKDI 78
+++TN++ LL + ++ P L + P+ + L L +N IP T N ++
Sbjct: 358 ESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSEL 417
Query: 79 LYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAGVIPNAIGCLNILQHLFLGYNRLQG 138
+ L+LS N L+G IP + +L L + +N G IP + + L+ L L +N L G
Sbjct: 418 VSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 477
Query: 139 SI 140
I
Sbjct: 478 EI 479
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%)
Query: 57 LSLASNELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAGVI 116
L ++ N L IP ++ + LNL N ++G IP E+ +L+ L + S N G I
Sbjct: 634 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 693
Query: 117 PNAIGCLNILQHLFLGYNRLQGSI 140
P A+ L +L + L N L G I
Sbjct: 694 PQAMSALTMLTEIDLSNNNLSGPI 717
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 71 TFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAGVIPNAIGCLNILQHLF 130
TF N +++L++S N L+G IP EI ++ L + N+ +G IP+ +G L L L
Sbjct: 624 TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILD 683
Query: 131 LGYNRLQGSI 140
L N+L G I
Sbjct: 684 LSSNKLDGRI 693
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 57 LSLASNELISVIPSTFWNLK-DILYLNLSLNSLTGPI-PLEIENLK-VLVKIYFSMNNFA 113
L L+ NE +P + NL +L L+LS N+ +GPI P +N K L ++Y N F
Sbjct: 345 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 404
Query: 114 GVIPNAIGCLNILQHLFLGYNRLQGSISYS 143
G IP + + L L L +N L G+I S
Sbjct: 405 GKIPPTLSNCSELVSLHLSFNYLSGTIPSS 434
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 57 LSLASNELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAGVI 116
+SL++N L IP L+++ L LS NS +G IP E+ + + L+ + + N F G I
Sbjct: 492 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 551
Query: 117 PNAI 120
P A+
Sbjct: 552 PAAM 555
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 57 LSLASNELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAGVI 116
L+L N++ IP +L+ + L+LS N L G IP + L +L +I S NN +G I
Sbjct: 658 LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI 717
Query: 117 P 117
P
Sbjct: 718 P 718
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 37/86 (43%)
Query: 55 ENLSLASNELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAG 114
+L L N L IP +K + L L N LTG IP + N L I S N G
Sbjct: 442 RDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTG 501
Query: 115 VIPNAIGCLNILQHLFLGYNRLQGSI 140
IP IG L L L L N G+I
Sbjct: 502 EIPKWIGRLENLAILKLSNNSFSGNI 527
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 55 ENLSLASNELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAG 114
++L ++ N+L ++ LN+S N GPIP LK L + + N F G
Sbjct: 223 QHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP--PLPLKSLQYLSLAENKFTG 280
Query: 115 VIPNAI-GCLNILQHLFLGYNRLQGSI 140
IP+ + G + L L L N G++
Sbjct: 281 EIPDFLSGACDTLTGLDLSGNHFYGAV 307
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 47 PPLRPPQQENLSLASNELISVIPSTFWNLKDILY-LNLSLNSLTGPIPLEIENLKVLVKI 105
PPL + LSLA N+ IP D L L+LS N G +P + +L +
Sbjct: 261 PPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESL 320
Query: 106 YFSMNNFAGVIP-NAIGCLNILQHLFLGYNRLQGSISYS 143
S NNF+G +P + + + L+ L L +N G + S
Sbjct: 321 ALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPES 359
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 55 ENLSLASNELISVIPSTFWNLKD----ILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMN 110
E L L++N IS W L D + +L +S N ++G + ++ L + S N
Sbjct: 151 EVLDLSANS-ISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSN 207
Query: 111 NFAGVIPNAIGCLNILQHLFLGYNRLQGSISYSKWFSCLEL 151
NF+ IP +G + LQHL + N+L G S + +C EL
Sbjct: 208 NFSTGIP-FLGDCSALQHLDISGNKLSGDFSRA-ISTCTEL 246
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 28/160 (17%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+++ +I G FG +++A++ D E LQ FK + E +M+ + N++++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFK--NRELQIMRKLDHCNIVRL 157
Query: 218 ------ISSRSNEDFKVLVLEYMPRG--------SLEKCLYSSNYVGF-------ALEYL 256
+ +E + LVL+Y+P S K YV +L Y+
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 217
Query: 257 HFDYSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIR 295
H S I H D+KP N+L D D V L DFG AK L+R
Sbjct: 218 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 254
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 28/157 (17%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E ++ E+M G+L +C
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH---- 298
LY + + A+EYL IH DL N L +N + ++DFG+++L+ + +
Sbjct: 116 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 172
Query: 299 ---FMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 173 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 23/190 (12%)
Query: 164 ISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRS 222
I +G G+++ A + E +++ +LQ + E VM+ N++ + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 223 NEDFKVLVLEYMPRGSL-----EKCLYSSNYVGFA---LEYLHFDYSVLIIHYDLKPSNV 274
D +V+EY+ GSL E C+ L+ L F +S +IH D+K N+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNI 147
Query: 275 LFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV------------YSFGIM 322
L + L+DFG + E ++ + T +MA V +S GIM
Sbjct: 148 LLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 205
Query: 323 LLEVFTRKKP 332
+E+ + P
Sbjct: 206 AIEMIEGEPP 215
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+++ +I G FG +++A++ D E LQ FK+ + + +M+ + N++++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQ--IMRKLDHCNIVRL 116
Query: 218 ------ISSRSNEDFKVLVLEYMPRG--------SLEKCLYSSNYVGF-------ALEYL 256
+ +E + LVL+Y+P S K YV +L Y+
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 176
Query: 257 HFDYSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIR 295
H S I H D+KP N+L D D V L DFG AK L+R
Sbjct: 177 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 213
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 30/201 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSV-KGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRS 222
+ G FG ++KA+ ++ + K + + + E +++ + + ++K++ +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 223 NEDFKVLVLEYMPRGSLEKCLYSSNYVGFA-----------LEYLHFDYSVLIIHYDLKP 271
++ +++E+ P G+++ + + G LE L+F +S IIH DLK
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDR-GLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKA 145
Query: 272 SNVLFDDNIVTHLSDFGIA----KLLIREDHF------------MIQTQTLATIGYMASY 315
NVL L+DFG++ K L + D F M +T Y A
Sbjct: 146 GNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKAD- 204
Query: 316 VYSFGIMLLEVFTRKKPTNKI 336
++S GI L+E+ + P +++
Sbjct: 205 IWSLGITLIEMAQIEPPHHEL 225
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 28/157 (17%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E ++ E+M G+L +C
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH---- 298
LY + + A+EYL IH DL N L +N + ++DFG+++L+ + +
Sbjct: 116 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 172
Query: 299 ---FMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 173 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 62 NELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAGVIPNAIG 121
N L+ IP L + YL ++ +++G IP + +K LV + FS N +G +P +I
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 122 CLNILQHLFLGYNRLQGSI-----SYSKWFSCLELCR 153
L L + NR+ G+I S+SK F+ + + R
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISR 183
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 67 VIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAGVIPNAIGCLNIL 126
IP +K ++ L+ S N+L+G +P I +L LV I F N +G IP++ G + L
Sbjct: 116 AIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKL 175
Query: 127 -QHLFLGYNRLQGSI 140
+ + NRL G I
Sbjct: 176 FTSMTISRNRLTGKI 190
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 68 IPSTFWNLK--DILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAGVIPNAIGCLNI 125
IPS+ NL + LY+ +N+L GPIP I L L +Y + N +G IP+ + +
Sbjct: 68 IPSSLANLPYLNFLYIG-GINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 126 LQHLFLGYNRLQGSISYS 143
L L YN L G++ S
Sbjct: 127 LVTLDFSYNALSGTLPPS 144
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 213 NLIKIISSRSNEDFKVLVLEYMPRGSL-----EKCLYSS----NYVGFALEYLHFDYSVL 263
++I +I S + F LV + M +G L EK S + + LE + F ++
Sbjct: 161 HIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN 220
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIA 290
I+H DLKP N+L DDN+ LSDFG +
Sbjct: 221 IVHRDLKPENILLDDNMQIRLSDFGFS 247
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 48/106 (45%), Gaps = 8/106 (7%)
Query: 51 PPQQENLS------LASNELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVK 104
PP N S L+ N L IPS+ +L + L L LN L G IP E+ +K L
Sbjct: 411 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 470
Query: 105 IYFSMNNFAGVIPNAIGCLNILQHLFLGYNRLQGSISYSKWFSCLE 150
+ N+ G IP+ + L + L NRL G I KW LE
Sbjct: 471 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI--PKWIGRLE 514
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%)
Query: 55 ENLSLASNELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAG 114
E L L N+L IPS N ++ +++LS N LTG IP I L+ L + S N+F+G
Sbjct: 469 ETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSG 528
Query: 115 VIPNAIGCLNILQHLFLGYNRLQGSI 140
IP +G L L L N G+I
Sbjct: 529 NIPAELGDCRSLIWLDLNTNLFNGTI 554
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 6/122 (4%)
Query: 25 KAVTNITFGLLVFIILCPRYNYPPL----RPPQQ--ENLSLASNELISVIPSTFWNLKDI 78
+++TN++ LL + ++ P L + P+ + L L +N IP T N ++
Sbjct: 361 ESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSEL 420
Query: 79 LYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAGVIPNAIGCLNILQHLFLGYNRLQG 138
+ L+LS N L+G IP + +L L + +N G IP + + L+ L L +N L G
Sbjct: 421 VSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 480
Query: 139 SI 140
I
Sbjct: 481 EI 482
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%)
Query: 57 LSLASNELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAGVI 116
L ++ N L IP ++ + LNL N ++G IP E+ +L+ L + S N G I
Sbjct: 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 696
Query: 117 PNAIGCLNILQHLFLGYNRLQGSI 140
P A+ L +L + L N L G I
Sbjct: 697 PQAMSALTMLTEIDLSNNNLSGPI 720
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 71 TFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAGVIPNAIGCLNILQHLF 130
TF N +++L++S N L+G IP EI ++ L + N+ +G IP+ +G L L L
Sbjct: 627 TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILD 686
Query: 131 LGYNRLQGSI 140
L N+L G I
Sbjct: 687 LSSNKLDGRI 696
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 57 LSLASNELISVIPSTFWNLK-DILYLNLSLNSLTGPI-PLEIENLK-VLVKIYFSMNNFA 113
L L+ NE +P + NL +L L+LS N+ +GPI P +N K L ++Y N F
Sbjct: 348 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 407
Query: 114 GVIPNAIGCLNILQHLFLGYNRLQGSISYS 143
G IP + + L L L +N L G+I S
Sbjct: 408 GKIPPTLSNCSELVSLHLSFNYLSGTIPSS 437
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 57 LSLASNELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAGVI 116
+SL++N L IP L+++ L LS NS +G IP E+ + + L+ + + N F G I
Sbjct: 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554
Query: 117 PNAI 120
P A+
Sbjct: 555 PAAM 558
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 57 LSLASNELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAGVI 116
L+L N++ IP +L+ + L+LS N L G IP + L +L +I S NN +G I
Sbjct: 661 LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI 720
Query: 117 P 117
P
Sbjct: 721 P 721
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 37/85 (43%)
Query: 56 NLSLASNELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAGV 115
+L L N L IP +K + L L N LTG IP + N L I S N G
Sbjct: 446 DLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 505
Query: 116 IPNAIGCLNILQHLFLGYNRLQGSI 140
IP IG L L L L N G+I
Sbjct: 506 IPKWIGRLENLAILKLSNNSFSGNI 530
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 55 ENLSLASNELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAG 114
++L ++ N+L ++ LN+S N GPIP LK L + + N F G
Sbjct: 226 QHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP--PLPLKSLQYLSLAENKFTG 283
Query: 115 VIPNAI-GCLNILQHLFLGYNRLQGSI 140
IP+ + G + L L L N G++
Sbjct: 284 EIPDFLSGACDTLTGLDLSGNHFYGAV 310
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 47 PPLRPPQQENLSLASNELISVIPSTFWNLKDILY-LNLSLNSLTGPIPLEIENLKVLVKI 105
PPL + LSLA N+ IP D L L+LS N G +P + +L +
Sbjct: 264 PPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESL 323
Query: 106 YFSMNNFAGVIP-NAIGCLNILQHLFLGYNRLQGSISYS 143
S NNF+G +P + + + L+ L L +N G + S
Sbjct: 324 ALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPES 362
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 55 ENLSLASNELISVIPSTFWNLKD----ILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMN 110
E L L++N IS W L D + +L +S N ++G + ++ L + S N
Sbjct: 154 EVLDLSANS-ISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSN 210
Query: 111 NFAGVIPNAIGCLNILQHLFLGYNRLQGSISYSKWFSCLEL 151
NF+ IP +G + LQHL + N+L G S + +C EL
Sbjct: 211 NFSTGIP-FLGDCSALQHLDISGNKLSGDFSRA-ISTCTEL 249
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 36/203 (17%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---IREDHFMIQTQTLATIGYMASY----- 315
++H DLKP N+L + L+DFG+A+ +R T + T+ Y A
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-----TYTHEVVTLWYRAPEILLGC 185
Query: 316 --------VYSFGIMLLEVFTRK 330
++S G + E+ TR+
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 35/201 (17%)
Query: 167 GGFGSIHKARIQDRMEFSV-KGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSNED 225
G FG ++KA+ ++ + K + + + E D++ S + N++K++ + E+
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 226 FKVLVLEYMPRGS-------LEKCLYSSNYVGF------ALEYLHFDYSVLIIHYDLKPS 272
+++E+ G+ LE+ L S AL YLH + IIH DLK
Sbjct: 81 NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAG 137
Query: 273 NVLFDDNIVTHLSDFGIAK-----LLIREDHF------------MIQTQTLATIGYMASY 315
N+LF + L+DFG++ + R D F M +T Y A
Sbjct: 138 NILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKAD- 196
Query: 316 VYSFGIMLLEVFTRKKPTNKI 336
V+S GI L+E+ + P +++
Sbjct: 197 VWSLGITLIEMAEIEPPHHEL 217
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 36/203 (17%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---IREDHFMIQTQTLATIGYMASY----- 315
++H DLKP N+L + L+DFG+A+ +R T + T+ Y A
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-----TYTHEVVTLWYRAPEILLGC 177
Query: 316 --------VYSFGIMLLEVFTRK 330
++S G + E+ TR+
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 36/203 (17%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---IREDHFMIQTQTLATIGYMASY----- 315
++H DLKP N+L + L+DFG+A+ +R T + T+ Y A
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-----TYTHEVVTLWYRAPEILLGX 185
Query: 316 --------VYSFGIMLLEVFTRK 330
++S G + E+ TR+
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 52/217 (23%)
Query: 164 ISRGGFGSIHKA---RIQDRMEFSVKGFHLQCSGA----FKSFDFECDVMKSTCYRNLIK 216
+ G FG + KA ++ R ++ + A + E +V+K + ++IK
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 217 IISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVG-------------------------- 250
+ + S + +L++EY GSL L S VG
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 251 ----FALEY---LHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQT 303
FA + + + + ++H DL N+L + +SDFG+++ + ED + ++
Sbjct: 151 DLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 304 QTLATIGYMA------------SYVYSFGIMLLEVFT 328
Q + +MA S V+SFG++L E+ T
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 36/203 (17%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHR 123
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---IREDHFMIQTQTLATIGYMASY----- 315
++H DLKP N+L + L+DFG+A+ +R T + T+ Y A
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-----TYTHEVVTLWYRAPEILLGC 178
Query: 316 --------VYSFGIMLLEVFTRK 330
++S G + E+ TR+
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 36/203 (17%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---IREDHFMIQTQTLATIGYMASY----- 315
++H DLKP N+L + L+DFG+A+ +R T + T+ Y A
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-----TYTHEVVTLWYRAPEILLGC 179
Query: 316 --------VYSFGIMLLEVFTRK 330
++S G + E+ TR+
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 36/203 (17%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---IREDHFMIQTQTLATIGYMASY----- 315
++H DLKP N+L + L+DFG+A+ +R T + T+ Y A
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-----TYTHEVVTLWYRAPEILLGC 178
Query: 316 --------VYSFGIMLLEVFTRK 330
++S G + E+ TR+
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 36/203 (17%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---IREDHFMIQTQTLATIGYMASY----- 315
++H DLKP N+L + L+DFG+A+ +R T + T+ Y A
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-----TYTHEVVTLWYRAPEILLGC 182
Query: 316 --------VYSFGIMLLEVFTRK 330
++S G + E+ TR+
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 36/203 (17%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---IREDHFMIQTQTLATIGYMASY----- 315
++H DLKP N+L + L+DFG+A+ +R T + T+ Y A
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-----TYTHEVVTLWYRAPEILLGC 177
Query: 316 --------VYSFGIMLLEVFTRK 330
++S G + E+ TR+
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 36/203 (17%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---IREDHFMIQTQTLATIGYMASY----- 315
++H DLKP N+L + L+DFG+A+ +R T + T+ Y A
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-----TYTHEVVTLWYRAPEILLGC 178
Query: 316 --------VYSFGIMLLEVFTRK 330
++S G + E+ TR+
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 58/222 (26%)
Query: 158 FSEDNLISRGGFGSIHKARIQ---------------DRMEFSVKGFH-------LQCSGA 195
F E LI GGFG + KA+ + ++ E VK + +G
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGC 73
Query: 196 FKSFDFE----CDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSS----- 246
+ FD++ D ++S+ Y SSRS + +E+ +G+LE+ +
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 247 ---------NYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRED 297
+ ++Y+H S +IH DLKPSN+ D + DFG+ L +
Sbjct: 134 DKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 190
Query: 298 HFMIQTQTLATIGYMASY------------VYSFGIMLLEVF 327
+T++ T+ YM+ +Y+ G++L E+
Sbjct: 191 K---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 187
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 188 ----AVDIWSLGCIFAEMVTRR 205
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 34/199 (17%)
Query: 161 DNLISRGGFGSIHKARIQ--DRMEFSVKGFHLQCSGAFK---SFDFECDVMKSTCYRNLI 215
+ +I G FG + R++ + E V L+ K F E +M + N+I
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFDYSV 262
+ + +++ EYM GSL+ L ++ +G ++YL D S
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS-DMSA 152
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---------IREDHFMIQTQTLATIGYM- 312
+H DL N+L + N+V +SDFG++++L R I+ I Y
Sbjct: 153 --VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 210
Query: 313 ---ASYVYSFGIMLLEVFT 328
AS V+S+GI++ EV +
Sbjct: 211 FTSASDVWSYGIVMWEVMS 229
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 52/217 (23%)
Query: 164 ISRGGFGSIHKA---RIQDRMEFSVKGFHLQCSGA----FKSFDFECDVMKSTCYRNLIK 216
+ G FG + KA ++ R ++ + A + E +V+K + ++IK
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 217 IISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVG-------------------------- 250
+ + S + +L++EY GSL L S VG
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 251 ----FALEY---LHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQT 303
FA + + + + ++H DL N+L + +SDFG+++ + ED + ++
Sbjct: 151 DLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 304 QTLATIGYMA------------SYVYSFGIMLLEVFT 328
Q + +MA S V+SFG++L E+ T
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 187 ----AVDIWSLGCIFAEMVTRR 204
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 251 FALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLA-TI 309
AL+YL + IIH D+KP N+L D++ H++DF IA +L RE Q T+A T
Sbjct: 126 MALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE----TQITTMAGTK 178
Query: 310 GYMASYVYS 318
YMA ++S
Sbjct: 179 PYMAPEMFS 187
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 186 ----AVDIWSLGCIFAEMVTRR 203
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 28/157 (17%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E ++ E+M G+L +C
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRED----- 297
LY + + A+EYL IH DL N L +N + ++DFG+++L+ +
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 175
Query: 298 --HFMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 186 ----AVDIWSLGCIFAEMVTRR 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 187 ----AVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 186 ----AVDIWSLGCIFAEMVTRR 203
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 36/203 (17%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---IREDHFMIQTQTLATIGYMASY----- 315
++H DLKP N+L + L+DFG+A+ +R T + T+ Y A
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-----TYTHEVVTLWYRAPEILLGX 178
Query: 316 --------VYSFGIMLLEVFTRK 330
++S G + E+ TR+
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 28/157 (17%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E ++ E+M G+L +C
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRED----- 297
LY + + A+EYL IH DL N L +N + ++DFG+++L+ +
Sbjct: 112 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 168
Query: 298 --HFMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 169 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 73/146 (50%), Gaps = 17/146 (11%)
Query: 162 NLISRGGFGSIHKARIQDRMEF-SVKGFHL-----QCSGAFKSFDFECDVMKSTCYRNLI 215
+ + G F +++KAR ++ + ++K L G ++ E +++ + N+I
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSN----------YVGFALEYLHFDYSVLII 265
++ + ++ LV ++M LE + ++ Y+ L+ L + + I+
Sbjct: 76 GLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL 134
Query: 266 HYDLKPSNVLFDDNIVTHLSDFGIAK 291
H DLKP+N+L D+N V L+DFG+AK
Sbjct: 135 HRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 32/201 (15%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
I G FG+++K + + + ++F E V++ T + N++ + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 224 EDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSVLIIHYDLK 270
+ V ++ SL K + + ++YLH + IIH DLK
Sbjct: 76 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 131
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------------SY 315
+N+ +++ + DFG+A + R Q +I +MA S
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 316 VYSFGIMLLEVFTRKKPTNKI 336
VY+FGI+L E+ T + P + I
Sbjct: 192 VYAFGIVLYELMTGQLPYSNI 212
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 26/128 (20%)
Query: 229 LVLEYMPRGSLEKCLYSSN---------YVGFALEYLHFDYSVLIIHYDLKPSNVLFDDN 279
+V+EY+ +L +++ + A + L+F + IIH D+KP+N++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 152
Query: 280 IVTHLSDFGIAKLLIREDHFMIQTQTLATIG---YMA------------SYVYSFGIMLL 324
+ DFGIA+ + D TQT A IG Y++ S VYS G +L
Sbjct: 153 NAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 325 EVFTRKKP 332
EV T + P
Sbjct: 211 EVLTGEPP 218
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 28/157 (17%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E ++ E+M G+L +C
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRED----- 297
LY + + A+EYL IH DL N L +N + ++DFG+++L+ +
Sbjct: 112 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHA 168
Query: 298 --HFMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 169 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 185 ----AVDIWSLGCIFAEMVTRR 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 182
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 183 ----AVDIWSLGCIFAEMVTRR 200
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 26/128 (20%)
Query: 229 LVLEYMPRGSLEKCLYSSN---------YVGFALEYLHFDYSVLIIHYDLKPSNVLFDDN 279
+V+EY+ +L +++ + A + L+F + IIH D+KP+N++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 152
Query: 280 IVTHLSDFGIAKLLIREDHFMIQTQTLATIG---YMA------------SYVYSFGIMLL 324
+ DFGIA+ + D TQT A IG Y++ S VYS G +L
Sbjct: 153 NAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 325 EVFTRKKP 332
EV T + P
Sbjct: 211 EVLTGEPP 218
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 185 ----AVDIWSLGCIFAEMVTRR 202
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 182
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 183 ----AVDIWSLGCIFAEMVTRR 200
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 32/201 (15%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
I G FG+++K + + + ++F E V++ T + N++ + +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 224 EDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSVLIIHYDLK 270
+ V ++ SL K + + ++YLH + IIH DLK
Sbjct: 78 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 133
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------------SY 315
+N+ +++ + DFG+A + R Q +I +MA S
Sbjct: 134 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 193
Query: 316 VYSFGIMLLEVFTRKKPTNKI 336
VY+FGI+L E+ T + P + I
Sbjct: 194 VYAFGIVLYELMTGQLPYSNI 214
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+++ +I G FG +++A++ D E LQ FK+ + + +M+ + N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQ--IMRKLDHCNIVRL 78
Query: 218 ----ISSRSNED--FKVLVLEYMPRGSLE------------KCLYSSNYVGFALEYLHFD 259
SS +D + LVL+Y+P +Y Y+ L +
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIR 295
+S I H D+KP N+L D D V L DFG AK L+R
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 184 ----AVDIWSLGCIFAEMVTRR 201
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 82/201 (40%), Gaps = 32/201 (15%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
I G FG+++K + + + ++F E V++ T + N++ + +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 224 EDFKVLVLEYMPRGSLEKCLYSSN-------------YVGFALEYLHFDYSVLIIHYDLK 270
+V ++ SL L++S ++YLH + IIH DLK
Sbjct: 80 PQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLK 135
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------------SY 315
+N+ ++ + DFG+A + R Q +I +MA S
Sbjct: 136 SNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 195
Query: 316 VYSFGIMLLEVFTRKKPTNKI 336
VY+FGI+L E+ T + P + I
Sbjct: 196 VYAFGIVLYELMTGQLPYSNI 216
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 184 ----AVDIWSLGCIFAEMVTRR 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 185 ----AVDIWSLGCIFAEMVTRR 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 184 ----AVDIWSLGCIFAEMVTRR 201
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 32/201 (15%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
I G FG+++K + + + ++F E V++ T + N++ + +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 224 EDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSVLIIHYDLK 270
+ V ++ SL K + + ++YLH + IIH DLK
Sbjct: 81 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 136
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------------SY 315
+N+ +++ + DFG+A + R Q +I +MA S
Sbjct: 137 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 316 VYSFGIMLLEVFTRKKPTNKI 336
VY+FGI+L E+ T + P + I
Sbjct: 197 VYAFGIVLYELMTGQLPYSNI 217
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 32/201 (15%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
I G FG+++K + + + ++F E V++ T + N++ + +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 224 EDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSVLIIHYDLK 270
+ V ++ SL K + + ++YLH + IIH DLK
Sbjct: 81 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 136
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------------SY 315
+N+ +++ + DFG+A + R Q +I +MA S
Sbjct: 137 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 316 VYSFGIMLLEVFTRKKPTNKI 336
VY+FGI+L E+ T + P + I
Sbjct: 197 VYAFGIVLYELMTGQLPYSNI 217
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 18/109 (16%)
Query: 232 EYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
E + L C Y V +EYL S IH DL NVL ++ V ++DFG+A+
Sbjct: 130 EQLSSKDLVSCAYQ---VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
Query: 292 LLIREDHFMIQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
+ D++ T + +MA S V+SFG++L E+FT
Sbjct: 184 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 202 ECDVMKSTC-YRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEY----- 255
E ++MK ++N+I ++ + + + +++EY +G+L + L + G Y
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 256 --------------------LHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIR 295
+ + S IH DL NVL +N V ++DFG+A+ +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINN 209
Query: 296 EDHFMIQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
D++ T + +MA S V+SFG+++ E+FT
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 37/155 (23%)
Query: 211 YRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEY--------------- 255
++N+I ++ + + + +++EY +G+L + L + G Y
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 256 ----------LHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
+ + S IH DL NVL +N V ++DFG+A+ + D++ T
Sbjct: 206 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 306 LATIGYMA------------SYVYSFGIMLLEVFT 328
+ +MA S V+SFG+++ E+FT
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 37/155 (23%)
Query: 211 YRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEY--------------- 255
++N+I ++ + + + +++EY +G+L + L + G Y
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 256 ----------LHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
+ + S IH DL NVL +N V ++DFG+A+ + D++ T
Sbjct: 149 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 306 LATIGYMA------------SYVYSFGIMLLEVFT 328
+ +MA S V+SFG+++ E+FT
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 95/222 (42%), Gaps = 38/222 (17%)
Query: 154 VTNGFSEDNLISRGGFGSIHKAR-IQDRMEFSVKGFHLQCSGA-------FKSFDFECDV 205
N + I +GGFG +HK R ++D+ ++K L S F+ F E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 206 MKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFA 252
M + + N++K+ N +V+E++P G L L + +
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 253 LEYLHFDYSVLIIHYDLKPSNVL---FDDN--IVTHLSDFGIAKLLIREDHFMI---QTQ 304
+EY+ + + I+H DL+ N+ D+N + ++DFG ++ + ++ Q
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWM 193
Query: 305 TLATIGY-MASY-----VYSFGIMLLEVFTRKKPTNKIFFSQ 340
TIG SY YSF ++L + T + P ++ + +
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK 235
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ + L+K + +S G L + L F +S
Sbjct: 68 VKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 187 ----AVDIWSLGCIFAEMVTRR 204
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 26/128 (20%)
Query: 229 LVLEYMPRGSLEKCLYSSN---------YVGFALEYLHFDYSVLIIHYDLKPSNVLFDDN 279
+V+EY+ +L +++ + A + L+F + IIH D+KP+N++
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 169
Query: 280 IVTHLSDFGIAKLLIREDHFMIQTQTLATIG---YMA------------SYVYSFGIMLL 324
+ DFGIA+ + D TQT A IG Y++ S VYS G +L
Sbjct: 170 NAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 227
Query: 325 EVFTRKKP 332
EV T + P
Sbjct: 228 EVLTGEPP 235
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 37/155 (23%)
Query: 211 YRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEY--------------- 255
++N+I ++ + + + +++EY +G+L + L + G Y
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 256 ----------LHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
+ + S IH DL NVL +N V ++DFG+A+ + D++ T
Sbjct: 147 VSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 306 LATIGYMA------------SYVYSFGIMLLEVFT 328
+ +MA S V+SFG+++ E+FT
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 31/175 (17%)
Query: 187 GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS--SRSNEDFKVLVLEYMPRGSLEKCL- 243
G +Q G + E ++K + N++K++ NED +V E + +G + +
Sbjct: 71 GGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT 130
Query: 244 ---YSSNYVGF-------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL 293
S + F +EYLH+ IIH D+KPSN+L ++ ++DFG++
Sbjct: 131 LKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEF 187
Query: 294 IREDHFMIQTQTLATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
D + + T+ T +MA S T KIF + D+ A+G
Sbjct: 188 KGSDALL--SNTVGTPAFMAPESLS-------------ETRKIFSGKALDVWAMG 227
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 28/157 (17%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E ++ E+M G+L +C
Sbjct: 300 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 359
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH---- 298
LY + + A+EYL IH +L N L +N + ++DFG+++L+ + +
Sbjct: 360 LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 416
Query: 299 ---FMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 417 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 37/155 (23%)
Query: 211 YRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEY--------------- 255
++N+I ++ + + + +++EY +G+L + L + G Y
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 256 ----------LHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
+ + S IH DL NVL +N V ++DFG+A+ + D++ T
Sbjct: 152 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 306 LATIGYMA------------SYVYSFGIMLLEVFT 328
+ +MA S V+SFG+++ E+FT
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 26/196 (13%)
Query: 163 LISRGGFGSIHKAR-IQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSR 221
++ +G +G ++ R + +++ ++K + S + E + K ++N+++ + S
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 222 SNEDFKVLVLEYMPRGSLEKCLYS--------SNYVGF----ALEYLHFDYSVLIIHYDL 269
S F + +E +P GSL L S +GF LE L + + I+H D+
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 134
Query: 270 KPSNVLFDD-NIVTHLSDFGIAKLLIR----EDHFMIQTQTLATI-------GY-MASYV 316
K NVL + + V +SDFG +K L + F Q +A GY A+ +
Sbjct: 135 KGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADI 194
Query: 317 YSFGIMLLEVFTRKKP 332
+S G ++E+ T K P
Sbjct: 195 WSLGCTIIEMATGKPP 210
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 187 ----AVDIWSLGCIFAEMVTRR 204
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 32/201 (15%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
I G FG+++K + + + ++F E V++ T + N++ + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 224 EDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSVLIIHYDLK 270
+ V ++ SL K + + ++YLH + IIH DLK
Sbjct: 76 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 131
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------------SY 315
+N+ +++ + DFG+A + R Q +I +MA S
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 316 VYSFGIMLLEVFTRKKPTNKI 336
VY+FGI+L E+ T + P + I
Sbjct: 192 VYAFGIVLYELMTGQLPYSNI 212
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 18/109 (16%)
Query: 232 EYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
E + L C Y V +EYL S IH DL NVL ++ V ++DFG+A+
Sbjct: 137 EQLSSKDLVSCAYQ---VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
Query: 292 LLIREDHFMIQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
+ D++ T + +MA S V+SFG++L E+FT
Sbjct: 191 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 18/109 (16%)
Query: 232 EYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
E + L C Y V +EYL S IH DL NVL ++ V ++DFG+A+
Sbjct: 134 EQLSSKDLVSCAYQ---VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
Query: 292 LLIREDHFMIQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
+ D++ T + +MA S V+SFG++L E+FT
Sbjct: 188 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 37/155 (23%)
Query: 211 YRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEY--------------- 255
++N+I ++ + + + +++EY +G+L + L + G Y
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 256 ----------LHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
+ + S IH DL NVL +N V ++DFG+A+ + D++ T
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 306 LATIGYMA------------SYVYSFGIMLLEVFT 328
+ +MA S V+SFG+++ E+FT
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 66 VKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 185 ----AVDIWSLGCIFAEMVTRR 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 184 ----AVDIWSLGCIFAEMVTRR 201
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 18/109 (16%)
Query: 232 EYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
E + L C Y V +EYL S IH DL NVL ++ V ++DFG+A+
Sbjct: 138 EQLSSKDLVSCAYQ---VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
Query: 292 LLIREDHFMIQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
+ D++ T + +MA S V+SFG++L E+FT
Sbjct: 192 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 18/109 (16%)
Query: 232 EYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
E + L C Y V +EYL S IH DL NVL ++ V ++DFG+A+
Sbjct: 145 EQLSSKDLVSCAYQ---VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 292 LLIREDHFMIQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
+ D++ T + +MA S V+SFG++L E+FT
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 37/155 (23%)
Query: 211 YRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEY--------------- 255
++N+I ++ + + + +++EY +G+L + L + G Y
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 256 ----------LHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
+ + S IH DL NVL +N V ++DFG+A+ + D++ T
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 306 LATIGYMA------------SYVYSFGIMLLEVFT 328
+ +MA S V+SFG+++ E+FT
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 202 ECDVMKSTC-YRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEY----- 255
E ++MK ++N+I ++ + + + +++EY +G+L + L + G Y
Sbjct: 124 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 183
Query: 256 --------------------LHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIR 295
+ + S IH DL NVL ++ V ++DFG+A+ +
Sbjct: 184 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 243
Query: 296 EDHFMIQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
D++ T + +MA S V+SFG++L E+FT
Sbjct: 244 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 18/109 (16%)
Query: 232 EYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
E + L C Y V +EYL S IH DL NVL ++ V ++DFG+A+
Sbjct: 145 EQLSSKDLVSCAYQ---VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 292 LLIREDHFMIQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
+ D++ T + +MA S V+SFG++L E+FT
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 28/157 (17%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E ++ E+M G+L +C
Sbjct: 258 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 317
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH---- 298
LY + + A+EYL IH +L N L +N + ++DFG+++L+ + +
Sbjct: 318 LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 374
Query: 299 ---FMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 375 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 26/196 (13%)
Query: 163 LISRGGFGSIHKAR-IQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSR 221
++ +G +G ++ R + +++ ++K + S + E + K ++N+++ + S
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 222 SNEDFKVLVLEYMPRGSLEKCLYS--------SNYVGF----ALEYLHFDYSVLIIHYDL 269
S F + +E +P GSL L S +GF LE L + + I+H D+
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 148
Query: 270 KPSNVLFDD-NIVTHLSDFGIAKLLIR----EDHFMIQTQTLATI-------GY-MASYV 316
K NVL + + V +SDFG +K L + F Q +A GY A+ +
Sbjct: 149 KGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADI 208
Query: 317 YSFGIMLLEVFTRKKP 332
+S G ++E+ T K P
Sbjct: 209 WSLGCTIIEMATGKPP 224
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 34/199 (17%)
Query: 161 DNLISRGGFGSIHKARIQ--DRMEFSVKGFHLQCSGAFK---SFDFECDVMKSTCYRNLI 215
+ +I G FG + R++ + E V L+ K F E +M + N+I
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFDYSV 262
+ + +++ EYM GSL+ L ++ +G ++YL +
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DM 135
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---------IREDHFMIQTQTLATIGYM- 312
+H DL N+L + N+V +SDFG++++L R I+ I Y
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 195
Query: 313 ---ASYVYSFGIMLLEVFT 328
AS V+S+GI++ EV +
Sbjct: 196 FTSASDVWSYGIVMWEVMS 214
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 202 ECDVMKSTC-YRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEY----- 255
E ++MK ++N+I ++ + + + +++EY +G+L + L + G Y
Sbjct: 90 EMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 256 --------------------LHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIR 295
+ + S IH DL NVL +N V ++DFG+A+ +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 296 EDHFMIQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
D++ T + +MA S V+SFG+++ E+FT
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 34/199 (17%)
Query: 161 DNLISRGGFGSIHKARIQ--DRMEFSVKGFHLQCSGAFK---SFDFECDVMKSTCYRNLI 215
+ +I G FG + R++ + E V L+ K F E +M + N+I
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFDYSV 262
+ + +++ EYM GSL+ L ++ +G ++YL +
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DM 129
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---------IREDHFMIQTQTLATIGYM- 312
+H DL N+L + N+V +SDFG++++L R I+ I Y
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 189
Query: 313 ---ASYVYSFGIMLLEVFT 328
AS V+S+GI++ EV +
Sbjct: 190 FTSASDVWSYGIVMWEVMS 208
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 28/157 (17%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----EKC---------- 242
+ F E VMK + NL++++ + E ++ E+M G+L +C
Sbjct: 261 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 320
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDH---- 298
LY + + A+EYL IH +L N L +N + ++DFG+++L+ + +
Sbjct: 321 LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377
Query: 299 ---FMIQTQTLATIGY----MASYVYSFGIMLLEVFT 328
F I+ ++ Y + S V++FG++L E+ T
Sbjct: 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 18/109 (16%)
Query: 232 EYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
E + L C Y V +EYL S IH DL NVL ++ V ++DFG+A+
Sbjct: 145 EQLSSKDLVSCAYQ---VARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 292 LLIREDHFMIQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
+ D++ T + +MA S V+SFG++L E+FT
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 32/201 (15%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
I G FG+++K + + + ++F E V++ T + N++ + +
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 224 EDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSVLIIHYDLK 270
+V ++ SL K + + ++YLH + IIH DLK
Sbjct: 103 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 158
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------------SY 315
+N+ +++ + DFG+A + R Q +I +MA S
Sbjct: 159 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 218
Query: 316 VYSFGIMLLEVFTRKKPTNKI 336
VY+FGI+L E+ T + P + I
Sbjct: 219 VYAFGIVLYELMTGQLPYSNI 239
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 122/324 (37%), Gaps = 82/324 (25%)
Query: 57 LSLASNELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAGVI 116
LS +LI +P L N + GP + L L Y S+ FA +
Sbjct: 110 LSHTGPDLIPEVPRQ-------LVTNCTQRLEQGPCKDLFQELTRLTHEYLSVAPFADYL 162
Query: 117 PNAIGCLNILQHLFLGYNRLQGSISYSKWFSCLELCRVT-NGFSEDNLISRGGFGSIHKA 175
+ I + FL + KW LE VT N F + ++ +GGFG +
Sbjct: 163 DS------IYFNRFLQW----------KW---LERQPVTKNTFRQYRVLGKGGFGEVCAC 203
Query: 176 RIQDRMEFSVKGFHLQCS-----------GAFKSFDFECDVMKSTCYRNLIKIISSRSNE 224
+++ G C G + + E +++ R ++ + + +
Sbjct: 204 QVR------ATGKMYACKKLEKKRIKKRKGEAMALN-EKQILEKVNSRFVVSLAYAYETK 256
Query: 225 DFKVLVLEYMPRGSLEKCLYSSNYVGF--------------ALEYLHFDYSVLIIHYDLK 270
D LVL M G L+ +Y GF LE LH + I++ DLK
Sbjct: 257 DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLK 313
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV------------YS 318
P N+L DD+ +SD G+A + + E + + T+GYMA V ++
Sbjct: 314 PENILLDDHGHIRISDLGLA-VHVPEGQTI--KGRVGTVGYMAPEVVKNERYTFSPDWWA 370
Query: 319 FGIMLLEVFTRKKPTNKIFFSQRN 342
G +L E+ + P F QR
Sbjct: 371 LGCLLYEMIAGQSP-----FQQRK 389
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 18/109 (16%)
Query: 232 EYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
E M L C Y + +EYL S IH DL NVL +N V ++DFG+A+
Sbjct: 152 EQMTFKDLVSCTYQ---LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 292 LLIREDHFMIQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
+ D++ T + +MA S V+SFG+++ E+FT
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 202 ECDVMKSTC-YRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEY----- 255
E ++MK ++N+I ++ + + + +++EY +G+L + L + G Y
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 256 --------------------LHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIR 295
+ + S IH DL NVL +N V ++DFG+A+ +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 296 EDHFMIQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
D++ T + +MA S V+SFG+++ E+FT
Sbjct: 210 IDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 18/109 (16%)
Query: 232 EYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
E M L C Y + +EYL S IH DL NVL +N V ++DFG+A+
Sbjct: 152 EQMTFKDLVSCTYQ---LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 292 LLIREDHFMIQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
+ D++ T + +MA S V+SFG+++ E+FT
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 32/201 (15%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
I G FG+++K + + + ++F E V++ T + N++ + +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 224 EDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSVLIIHYDLK 270
+V ++ SL K + + ++YLH + IIH DLK
Sbjct: 104 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 159
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------------SY 315
+N+ +++ + DFG+A + R Q +I +MA S
Sbjct: 160 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 219
Query: 316 VYSFGIMLLEVFTRKKPTNKI 336
VY+FGI+L E+ T + P + I
Sbjct: 220 VYAFGIVLYELMTGQLPYSNI 240
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 95/237 (40%), Gaps = 59/237 (24%)
Query: 144 KWFSCLELCRVT-NGFSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCS--------- 193
KW LE VT N F + ++ +GGFG + +++ G C
Sbjct: 174 KW---LERQPVTKNTFRQYRVLGKGGFGEVCACQVR------ATGKMYACKKLEKKRIKK 224
Query: 194 --GAFKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF 251
G + + E +++ R ++ + + +D LVL M G L+ +Y GF
Sbjct: 225 RKGEAMALN-EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGF 283
Query: 252 --------------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRED 297
LE LH + I++ DLKP N+L DD+ +SD G+A + + E
Sbjct: 284 PEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLA-VHVPEG 339
Query: 298 HFMIQTQTLATIGYMASYV------------YSFGIMLLEVFTRKKPTNKIFFSQRN 342
+ + T+GYMA V ++ G +L E+ + P F QR
Sbjct: 340 QTI--KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP-----FQQRK 389
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 23/190 (12%)
Query: 164 ISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRS 222
I +G G+++ A + E +++ +LQ + E VM+ N++ + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 223 NEDFKVLVLEYMPRGSL-----EKCLYSSNYVGFA---LEYLHFDYSVLIIHYDLKPSNV 274
D +V+EY+ GSL E C+ L+ L F +S +IH ++K N+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNI 148
Query: 275 LFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV------------YSFGIM 322
L + L+DFG + E ++ + T +MA V +S GIM
Sbjct: 149 LLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 206
Query: 323 LLEVFTRKKP 332
+E+ + P
Sbjct: 207 AIEMIEGEPP 216
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 18/139 (12%)
Query: 205 VMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFA---LEYLHFDYS 261
+ + CY +L+ + + L Y P + E+ L S + + F+ + + F S
Sbjct: 128 ITEYCCYGDLLNFLRRKRPPG---LEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLAS 184
Query: 262 VLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA-------- 313
IH D+ NVL + V + DFG+A+ ++ + +++++ + +MA
Sbjct: 185 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 244
Query: 314 ----SYVYSFGIMLLEVFT 328
S V+S+GI+L E+F+
Sbjct: 245 YTVQSDVWSYGILLWEIFS 263
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 24/157 (15%)
Query: 195 AFKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYS--------- 245
A F E + M S +RNLI++ K +V E P GSL L
Sbjct: 58 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT 116
Query: 246 -SNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIR-EDHFMIQT 303
S Y E + + S IH DL N+L + + DFG+ + L + +DH+++Q
Sbjct: 117 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 176
Query: 304 -----------QTLATIGYM-ASYVYSFGIMLLEVFT 328
++L T + AS + FG+ L E+FT
Sbjct: 177 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 158 FSEDNLISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRN 213
F ++ G F ++ AR + E+++K H+ E DVM +
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSL-----------EKC--LYSSNYVGFALEYLHFDY 260
+K+ + +++ L Y G L E C Y++ V ALEYLH
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-ALEYLH--- 127
Query: 261 SVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA 313
IIH DLKP N+L ++++ ++DFG AK+L E + T Y++
Sbjct: 128 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 180
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 25/176 (14%)
Query: 158 FSEDNLISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRN 213
F ++ G F ++ AR + E+++K H+ E DVM +
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSL-----------EKC--LYSSNYVGFALEYLHFDY 260
+K+ + +++ L Y G L E C Y++ V ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-ALEYLH--- 147
Query: 261 SVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV 316
IIH DLKP N+L ++++ ++DFG AK+L E Q + A +G A YV
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK---QARANAFVG-TAQYV 199
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 32/201 (15%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
I G FG+++K + + + ++F E V++ T + N++ + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 224 EDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSVLIIHYDLK 270
+ V ++ SL K + + ++YLH + IIH DLK
Sbjct: 76 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 131
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------------SY 315
+N+ +++ + DFG+A R Q +I +MA S
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 316 VYSFGIMLLEVFTRKKPTNKI 336
VY+FGI+L E+ T + P + I
Sbjct: 192 VYAFGIVLYELMTGQLPYSNI 212
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 24/157 (15%)
Query: 195 AFKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYS--------- 245
A F E + M S +RNLI++ K +V E P GSL L
Sbjct: 64 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT 122
Query: 246 -SNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIR-EDHFMIQT 303
S Y E + + S IH DL N+L + + DFG+ + L + +DH+++Q
Sbjct: 123 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 182
Query: 304 -----------QTLATIGYM-ASYVYSFGIMLLEVFT 328
++L T + AS + FG+ L E+FT
Sbjct: 183 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 24/157 (15%)
Query: 195 AFKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYS--------- 245
A F E + M S +RNLI++ K +V E P GSL L
Sbjct: 58 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT 116
Query: 246 -SNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIR-EDHFMIQT 303
S Y E + + S IH DL N+L + + DFG+ + L + +DH+++Q
Sbjct: 117 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 176
Query: 304 -----------QTLATIGYM-ASYVYSFGIMLLEVFT 328
++L T + AS + FG+ L E+FT
Sbjct: 177 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 158 FSEDNLISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRN 213
F ++ G F ++ AR + E+++K H+ E DVM +
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSL-----------EKC--LYSSNYVGFALEYLHFDY 260
+K+ + +++ L Y G L E C Y++ V ALEYLH
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-ALEYLH--- 126
Query: 261 SVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA 313
IIH DLKP N+L ++++ ++DFG AK+L E + T Y++
Sbjct: 127 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 179
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 24/157 (15%)
Query: 195 AFKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYS--------- 245
A F E + M S +RNLI++ K +V E P GSL L
Sbjct: 54 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT 112
Query: 246 -SNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIR-EDHFMIQT 303
S Y E + + S IH DL N+L + + DFG+ + L + +DH+++Q
Sbjct: 113 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 172
Query: 304 -----------QTLATIGYM-ASYVYSFGIMLLEVFT 328
++L T + AS + FG+ L E+FT
Sbjct: 173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 63/157 (40%), Gaps = 24/157 (15%)
Query: 195 AFKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYS--------- 245
A F E + M S +RNLI++ K +V E P GSL L
Sbjct: 54 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT 112
Query: 246 -SNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIR-EDHFMIQT 303
S Y E + + S IH DL N+L + + DFG+ + L + +DH+++Q
Sbjct: 113 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 172
Query: 304 QTLATIGYM------------ASYVYSFGIMLLEVFT 328
+ AS + FG+ L E+FT
Sbjct: 173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 81/201 (40%), Gaps = 32/201 (15%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
I G FG+++K + + + ++F E V++ T + N++ + +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 224 EDFKVLVLEYMPRGSLEKCLYSSN-------------YVGFALEYLHFDYSVLIIHYDLK 270
+V ++ SL L++S ++YLH + IIH DLK
Sbjct: 92 PQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLK 147
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------------SY 315
+N+ ++ + DFG+A R Q +I +MA S
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 207
Query: 316 VYSFGIMLLEVFTRKKPTNKI 336
VY+FGI+L E+ T + P + I
Sbjct: 208 VYAFGIVLYELMTGQLPYSNI 228
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 27/147 (18%)
Query: 205 VMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEK-----------CLYSSNYVGFAL 253
+ + CY +L+ + S+ E F +EY + LE+ L + V +
Sbjct: 127 IFEYCCYGDLLNYLRSK-REKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGM 185
Query: 254 EYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA 313
E+L F V H DL NVL V + DFG+A+ ++ + +++++ + +MA
Sbjct: 186 EFLEFKSCV---HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMA 242
Query: 314 ------------SYVYSFGIMLLEVFT 328
S V+S+GI+L E+F+
Sbjct: 243 PESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 158 FSEDNLISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRN 213
F ++ G F ++ AR + E+++K H+ E DVM +
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSL-----------EKC--LYSSNYVGFALEYLHFDY 260
+K+ + +++ L Y G L E C Y++ V ALEYLH
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-ALEYLH--- 124
Query: 261 SVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA 313
IIH DLKP N+L ++++ ++DFG AK+L E + T Y++
Sbjct: 125 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 177
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 18/136 (13%)
Query: 205 VMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI 264
+ + CY +L+ + ++ D L E L L+ S+ V + +L S
Sbjct: 128 ITEYCCYGDLLNFLRRKAEAD---LDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNC 181
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA----------- 313
IH D+ NVL + V + DFG+A+ ++ + +++++ + +MA
Sbjct: 182 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV 241
Query: 314 -SYVYSFGIMLLEVFT 328
S V+S+GI+L E+F+
Sbjct: 242 QSDVWSYGILLWEIFS 257
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 158 FSEDNLISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRN 213
F ++ G F ++ AR + E+++K H+ E DVM +
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSL-----------EKC--LYSSNYVGFALEYLHFDY 260
+K+ + +++ L Y G L E C Y++ V ALEYLH
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-ALEYLH--- 125
Query: 261 SVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA 313
IIH DLKP N+L ++++ ++DFG AK+L E + T Y++
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 178
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 36/203 (17%)
Query: 158 FSEDNLISRGGFGSIHKAR---IQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + + + G + E ++K + N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---IREDHFMIQTQTLATIGYMASY----- 315
++H DLKP N+L + L+DFG+A+ +R T + T+ Y A
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-----TYTHEVVTLWYRAPEILLGC 178
Query: 316 --------VYSFGIMLLEVFTRK 330
++S G + E+ TR+
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 36/203 (17%)
Query: 158 FSEDNLISRGGFGSIHKAR---IQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + + + G + E ++K + N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+K + +S G L + L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---IREDHFMIQTQTLATIGYMASY----- 315
++H DLKP N+L + L+DFG+A+ +R T + T+ Y A
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-----TYTHEVVTLWYRAPEILLGC 177
Query: 316 --------VYSFGIMLLEVFTRK 330
++S G + E+ TR+
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 18/136 (13%)
Query: 205 VMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI 264
+ + CY +L+ + ++ D L E L L+ S+ V + +L S
Sbjct: 120 ITEYCCYGDLLNFLRRKAEAD---LDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNC 173
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA----------- 313
IH D+ NVL + V + DFG+A+ ++ + +++++ + +MA
Sbjct: 174 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV 233
Query: 314 -SYVYSFGIMLLEVFT 328
S V+S+GI+L E+F+
Sbjct: 234 QSDVWSYGILLWEIFS 249
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 158 FSEDNLISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRN 213
F ++ G F ++ AR + E+++K H+ E DVM +
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSL-----------EKC--LYSSNYVGFALEYLHFDY 260
+K+ + +++ L Y G L E C Y++ V ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-ALEYLH--- 150
Query: 261 SVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA 313
IIH DLKP N+L ++++ ++DFG AK+L E + T Y++
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 203
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 23/157 (14%)
Query: 157 GFSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIK 216
++ +I G FG + +A++ + E ++K LQ FK + E +M+ + N++
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKV-LQ-DKRFK--NRELQIMRIVKHPNVVD 96
Query: 217 IIS------SRSNEDFKVLVLEYMPRGSLEKCLYSSN------------YVGFALEYLHF 258
+ + + +E F LVLEY+P + + Y+ L L +
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 259 DYSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLI 294
+S+ I H D+KP N+L D + V L DFG AK+LI
Sbjct: 157 IHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 158 FSEDNLISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRN 213
F ++ G F ++ AR + E+++K H+ E DVM +
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSL-----------EKC--LYSSNYVGFALEYLHFDY 260
+K+ + +++ L Y G L E C Y++ V ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-ALEYLH--- 146
Query: 261 SVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA 313
IIH DLKP N+L ++++ ++DFG AK+L E + T Y++
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 199
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 158 FSEDNLISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRN 213
F ++ G F ++ AR + E+++K H+ E DVM +
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSL-----------EKC--LYSSNYVGFALEYLHFDY 260
+K+ + +++ L Y G L E C Y++ V ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-ALEYLH--- 149
Query: 261 SVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA 313
IIH DLKP N+L ++++ ++DFG AK+L E + T Y++
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 158 FSEDNLISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRN 213
F ++ G F ++ AR + E+++K H+ E DVM +
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSL-----------EKC--LYSSNYVGFALEYLHFDY 260
+K+ + +++ L Y G L E C Y++ V ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-ALEYLH--- 147
Query: 261 SVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA 313
IIH DLKP N+L ++++ ++DFG AK+L E + T Y++
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 158 FSEDNLISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRN 213
F ++ G F ++ AR + E+++K H+ E DVM +
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSL-----------EKC--LYSSNYVGFALEYLHFDY 260
+K+ + +++ L Y G L E C Y++ V ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-ALEYLH--- 150
Query: 261 SVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA 313
IIH DLKP N+L ++++ ++DFG AK+L E + T Y++
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 203
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 158 FSEDNLISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRN 213
F ++ G F ++ AR + E+++K H+ E DVM +
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSL-----------EKC--LYSSNYVGFALEYLHFDY 260
+K+ + +++ L Y G L E C Y++ V ALEYLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-ALEYLH--- 152
Query: 261 SVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA 313
IIH DLKP N+L ++++ ++DFG AK+L E + T Y++
Sbjct: 153 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 205
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 158 FSEDNLISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRN 213
F ++ G F ++ AR + E+++K H+ E DVM +
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSL-----------EKC--LYSSNYVGFALEYLHFDY 260
+K+ + +++ L Y G L E C Y++ V ALEYLH
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-ALEYLH--- 131
Query: 261 SVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA 313
IIH DLKP N+L ++++ ++DFG AK+L E + T Y++
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 184
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 28/138 (20%)
Query: 210 CYRNLIKIISSRSNEDFKVLVLEYMPR-------GSLEKCLYSSNYVGFALEYLHFDYSV 262
CY +L+ + +S VLE P S L+ S+ V + +L S
Sbjct: 133 CYGDLLNFLRRKSR------VLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SK 183
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA--------- 313
IH D+ NVL + V + DFG+A+ ++ + +++++ + +MA
Sbjct: 184 NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY 243
Query: 314 ---SYVYSFGIMLLEVFT 328
S V+S+GI+L E+F+
Sbjct: 244 TVQSDVWSYGILLWEIFS 261
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 158 FSEDNLISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRN 213
F ++ G F ++ AR + E+++K H+ E DVM +
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSL-----------EKC--LYSSNYVGFALEYLHFDY 260
+K+ + +++ L Y G L E C Y++ V ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-ALEYLH--- 146
Query: 261 SVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA 313
IIH DLKP N+L ++++ ++DFG AK+L E + T Y++
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 199
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 158 FSEDNLISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRN 213
F ++ G F ++ AR + E+++K H+ E DVM +
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSL-----------EKC--LYSSNYVGFALEYLHFDY 260
+K+ + +++ L Y G L E C Y++ V ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-ALEYLH--- 149
Query: 261 SVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA 313
IIH DLKP N+L ++++ ++DFG AK+L E + T Y++
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 32/201 (15%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
I G FG+++K + + + ++F E V++ T + N++ + +
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 224 EDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSVLIIHYDLK 270
+V ++ SL K + + ++YLH + IIH DLK
Sbjct: 96 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 151
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------------SY 315
+N+ +++ + DFG+A R Q +I +MA S
Sbjct: 152 SNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 211
Query: 316 VYSFGIMLLEVFTRKKPTNKI 336
VY+FGI+L E+ T + P + I
Sbjct: 212 VYAFGIVLYELMTGQLPYSNI 232
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+ + +S G L + L F +S
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 187 ----AVDIWSLGCIFAEMVTRR 204
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 17/125 (13%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL-----------EKC--LYSSNY 248
E DVM + +K+ + +++ L Y G L E C Y++
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT 308
V ALEYLH IIH DLKP N+L ++++ ++DFG AK+L E + T
Sbjct: 142 VS-ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 309 IGYMA 313
Y++
Sbjct: 198 AQYVS 202
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 158 FSEDNLISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRN 213
F ++ G F ++ AR + E+++K H+ E DVM +
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSL-----------EKC--LYSSNYVGFALEYLHFDY 260
+K+ + +++ L Y G L E C Y++ V ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-ALEYLH--- 147
Query: 261 SVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA 313
IIH DLKP N+L ++++ ++DFG AK+L E + T Y++
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 95/222 (42%), Gaps = 38/222 (17%)
Query: 154 VTNGFSEDNLISRGGFGSIHKAR-IQDRMEFSVKGFHLQCSGA-------FKSFDFECDV 205
N + I +GGFG +HK R ++D+ ++K L S F+ F E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 206 MKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFA 252
M + + N++K+ N +V+E++P G L L + +
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 253 LEYLHFDYSVLIIHYDLKPSNVL---FDDN--IVTHLSDFGIAKLLIREDHFMI---QTQ 304
+EY+ + + I+H DL+ N+ D+N + ++DF +++ + ++ Q
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWM 193
Query: 305 TLATIGY-MASY-----VYSFGIMLLEVFTRKKPTNKIFFSQ 340
TIG SY YSF ++L + T + P ++ + +
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK 235
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 158 FSEDNLISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRN 213
F ++ G F ++ AR + E+++K H+ E DVM +
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSL-----------EKC--LYSSNYVGFALEYLHFDY 260
+K+ + +++ L Y G L E C Y++ V ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-ALEYLH--- 149
Query: 261 SVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA 313
IIH DLKP N+L ++++ ++DFG AK+L E + T Y++
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 17/125 (13%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL-----------EKC--LYSSNY 248
E DVM + +K+ + +++ L Y G L E C Y++
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT 308
V ALEYLH IIH DLKP N+L ++++ ++DFG AK+L E + T
Sbjct: 140 VS-ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 309 IGYMA 313
Y++
Sbjct: 196 AQYVS 200
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 81/201 (40%), Gaps = 32/201 (15%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
I G FG+++K + + + ++F E V++ T + N++ + +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 224 EDFKVLVLEYMPRGSLEKCLYSSN-------------YVGFALEYLHFDYSVLIIHYDLK 270
+V ++ SL L++S ++YLH + IIH DLK
Sbjct: 92 PQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLK 147
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------------SY 315
+N+ ++ + DFG+A R Q +I +MA S
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 207
Query: 316 VYSFGIMLLEVFTRKKPTNKI 336
VY+FGI+L E+ T + P + I
Sbjct: 208 VYAFGIVLYELMTGQLPYSNI 228
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 32/201 (15%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
I G FG+++K + + + ++F E V++ T + N++ + +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 224 EDFKVLVLEYMPRGSLE-------------KCLYSSNYVGFALEYLHFDYSVLIIHYDLK 270
+V ++ SL K + + ++YLH + IIH DLK
Sbjct: 104 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLK 159
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------------SY 315
+N+ +++ + DFG+A R Q +I +MA S
Sbjct: 160 SNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 219
Query: 316 VYSFGIMLLEVFTRKKPTNKI 336
VY+FGI+L E+ T + P + I
Sbjct: 220 VYAFGIVLYELMTGQLPYSNI 240
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+ + +S G L + L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 184 ----AVDIWSLGCIFAEMVTRR 201
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 17/125 (13%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL-----------EKC--LYSSNY 248
E DVM + +K+ + +++ L Y G L E C Y++
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT 308
V ALEYLH IIH DLKP N+L ++++ ++DFG AK+L E + T
Sbjct: 142 VS-ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 309 IGYMA 313
Y++
Sbjct: 198 AQYVS 202
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 34/199 (17%)
Query: 161 DNLISRGGFGSIHKARIQ--DRMEFSVKGFHLQCSGAFK---SFDFECDVMKSTCYRNLI 215
+ +I G FG + R++ + E V L+ K F E +M + N+I
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSN-------YVGF------ALEYLHFDYSV 262
+ + ++V EYM GSL+ L ++ VG ++YL +
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLS---DM 143
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---------IREDHFMIQTQTLATIGYM- 312
+H DL N+L + N+V +SDFG++++L R I+ I +
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRK 203
Query: 313 ---ASYVYSFGIMLLEVFT 328
AS V+S+GI++ EV +
Sbjct: 204 FTSASDVWSYGIVMWEVVS 222
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 158 FSEDNLISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRN 213
F ++ G F ++ AR + E+++K H+ E DVM +
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSL-----------EKC--LYSSNYVGFALEYLHFDY 260
+K+ + +++ L Y G L E C Y++ V ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVS-ALEYLH--- 149
Query: 261 SVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA 313
IIH DLKP N+L ++++ ++DFG AK+L E + T Y++
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 202
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 41/204 (20%)
Query: 163 LISRGGFGSIHKARIQD-RMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKII 218
+I RG FG + R + R +++K F + F E D+M ++++
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 219 SSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFDYSVLII 265
+ ++ + +V+EYMP G L + SNY V AL+ +H S+ I
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTAEVVLALDAIH---SMGFI 195
Query: 266 HYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT-LATIGYMASYV-------- 316
H D+KP N+L D + L+DFG + +E M++ T + T Y++ V
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--MVRCDTAVGTPDYISPEVLKSQGGDG 253
Query: 317 --------YSFGIMLLEVFTRKKP 332
+S G+ L E+ P
Sbjct: 254 YYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 37/155 (23%)
Query: 211 YRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEY--------------- 255
++N+I ++ + + + +++EY +G+L + L + G Y
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 256 ----------LHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
+ + S IH DL NVL +N V ++DFG+A+ + D T
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 306 LATIGYMA------------SYVYSFGIMLLEVFT 328
+ +MA S V+SFG+++ E+FT
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 20/132 (15%)
Query: 211 YRNLIKIISSRSNE--DFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHYD 268
+ NL + S+ NE +K L +++ +LE + S V +E+L S IH D
Sbjct: 116 FGNLSTYLRSKRNEFVPYKDLYKDFL---TLEHLIXYSFQVAKGMEFL---ASRKXIHRD 169
Query: 269 LKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYV 316
L N+L + V + DFG+A+ + ++ ++ + + +MA S V
Sbjct: 170 LAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 229
Query: 317 YSFGIMLLEVFT 328
+SFG++L E+F+
Sbjct: 230 WSFGVLLWEIFS 241
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 28/187 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
I +G FG + + D V ++ ++F E VM + NL++++
Sbjct: 20 IGKGEFGDVM---LGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 224 EDFKV-LVLEYMPRGSLEKCLYSSNY--------------VGFALEYLHFDYSVLIIHYD 268
E + +V EYM +GSL L S V A+EYL + +H D
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 133
Query: 269 LKPSNVLFDDNIVTHLSDFGIAKLLIR-EDHFMIQTQTLATIGY------MASYVYSFGI 321
L NVL ++ V +SDFG+ K +D + + A S V+SFGI
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGI 193
Query: 322 MLLEVFT 328
+L E+++
Sbjct: 194 LLWEIYS 200
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 41/204 (20%)
Query: 163 LISRGGFGSI----HKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKII 218
+I RG FG + HKA + + F + F E D+M ++++
Sbjct: 82 VIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 141
Query: 219 SSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFDYSVLII 265
+ ++ + +V+EYMP G L + SNY V AL+ +H S+ +I
Sbjct: 142 CAFQDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKWAKFYTAEVVLALDAIH---SMGLI 196
Query: 266 HYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT-LATIGYMASYV-------- 316
H D+KP N+L D + L+DFG + ++ M+ T + T Y++ V
Sbjct: 197 HRDVKPDNMLLDKHGHLKLADFGTC--MKMDETGMVHCDTAVGTPDYISPEVLKSQGGDG 254
Query: 317 --------YSFGIMLLEVFTRKKP 332
+S G+ L E+ P
Sbjct: 255 YYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 41/204 (20%)
Query: 163 LISRGGFGSIHKARIQD-RMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKII 218
+I RG FG + R + R +++K F + F E D+M ++++
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135
Query: 219 SSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFDYSVLII 265
+ ++ + +V+EYMP G L + SNY V AL+ +H S+ I
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTAEVVLALDAIH---SMGFI 190
Query: 266 HYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT-LATIGYMASYV-------- 316
H D+KP N+L D + L+DFG + +E M++ T + T Y++ V
Sbjct: 191 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--MVRCDTAVGTPDYISPEVLKSQGGDG 248
Query: 317 --------YSFGIMLLEVFTRKKP 332
+S G+ L E+ P
Sbjct: 249 YYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 50/223 (22%)
Query: 153 RVTNGFSEDNLISRGGFGSIHKAR-IQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCY 211
R + F E ++ +G FG + KAR D +++K + E ++ S +
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 212 -------------RNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEY--- 255
RN +K +++ + + +EY G+L ++S N EY
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 256 -------LHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTL- 306
L + +S IIH DLKP N+ D++ + DFG+AK + R D + +Q L
Sbjct: 122 FRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 307 ----------ATIGYMASYV-------------YSFGIMLLEV 326
T Y+A+ V YS GI+ E+
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+ + +S G L + L F +S
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 187 ----AVDIWSLGCIFAEMVTRR 204
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 41/204 (20%)
Query: 163 LISRGGFGSIHKARIQD-RMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKII 218
+I RG FG + R + R +++K F + F E D+M ++++
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 219 SSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFDYSVLII 265
+ ++ + +V+EYMP G L + SNY V AL+ +H S+ I
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTAEVVLALDAIH---SMGFI 195
Query: 266 HYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT-LATIGYMASYV-------- 316
H D+KP N+L D + L+DFG + +E M++ T + T Y++ V
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--MVRCDTAVGTPDYISPEVLKSQGGDG 253
Query: 317 --------YSFGIMLLEVFTRKKP 332
+S G+ L E+ P
Sbjct: 254 YYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 34/141 (24%)
Query: 210 CYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVL------ 263
CY +L+ + +S VLE P ++ S+ + LHF V
Sbjct: 133 CYGDLLNFLRRKSR------VLETDPAFAIANSTLSTR------DLLHFSSQVAQGMAFL 180
Query: 264 ----IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------ 313
IH D+ NVL + V + DFG+A+ ++ + +++++ + +MA
Sbjct: 181 ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFD 240
Query: 314 ------SYVYSFGIMLLEVFT 328
S V+S+GI+L E+F+
Sbjct: 241 CVYTVQSDVWSYGILLWEIFS 261
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 36/203 (17%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+ + +S G L + L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLL---IREDHFMIQTQTLATIGYMASY----- 315
++H DLKP N+L + L+DFG+A+ +R T + T+ Y A
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-----TYTHEVVTLWYRAPEILLGC 177
Query: 316 --------VYSFGIMLLEVFTRK 330
++S G + E+ TR+
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 34/202 (16%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHL--QCSGAFKSFDFECDVMKSTCYRNL 214
F + I G +G ++KAR + E ++K L + G + E ++K + N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL-----------EYLHFDYSVL 263
+K++ E+ LV E++ L+ + +S G L + L F +S
Sbjct: 67 VKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAK---------------LLIREDHFMIQTQTLAT 308
++H DLKP N+L + L+DFG+A+ L R ++ + +T
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 309 IGYMASYVYSFGIMLLEVFTRK 330
A ++S G + E+ TR+
Sbjct: 186 ----AVDIWSLGCIFAEMVTRR 203
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 79/212 (37%), Gaps = 60/212 (28%)
Query: 167 GGFGSIHKARIQD----------RMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIK 216
GGFG + + QD R E S K C E +MK + N++
Sbjct: 26 GGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWC--------LEIQIMKKLNHPNVVS 77
Query: 217 I------ISSRSNEDFKVLVLEYMPRGSLEKCLYS-SNYVGF--------------ALEY 255
+ + D +L +EY G L K L N G AL Y
Sbjct: 78 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 137
Query: 256 LHFDYSVLIIHYDLKPSNVLFD---DNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYM 312
LH + IIH DLKP N++ ++ + D G AK L D + T+ + T+ Y+
Sbjct: 138 LHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYL 191
Query: 313 ASYV------------YSFGIMLLEVFTRKKP 332
A + +SFG + E T +P
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 79/212 (37%), Gaps = 60/212 (28%)
Query: 167 GGFGSIHKARIQD----------RMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIK 216
GGFG + + QD R E S K C E +MK + N++
Sbjct: 25 GGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWC--------LEIQIMKKLNHPNVVS 76
Query: 217 I------ISSRSNEDFKVLVLEYMPRGSLEKCLYS-SNYVGF--------------ALEY 255
+ + D +L +EY G L K L N G AL Y
Sbjct: 77 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 136
Query: 256 LHFDYSVLIIHYDLKPSNVLFD---DNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYM 312
LH + IIH DLKP N++ ++ + D G AK L D + T+ + T+ Y+
Sbjct: 137 LHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYL 190
Query: 313 ASYV------------YSFGIMLLEVFTRKKP 332
A + +SFG + E T +P
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 28/187 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
I +G FG + + D V ++ ++F E VM + NL++++
Sbjct: 14 IGKGEFGDVM---LGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 224 EDFKV-LVLEYMPRGSLEKCLYSSNY--------------VGFALEYLHFDYSVLIIHYD 268
E + +V EYM +GSL L S V A+EYL + +H D
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 127
Query: 269 LKPSNVLFDDNIVTHLSDFGIAKLLIR-EDHFMIQTQTLATIGY------MASYVYSFGI 321
L NVL ++ V +SDFG+ K +D + + A S V+SFGI
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGI 187
Query: 322 MLLEVFT 328
+L E+++
Sbjct: 188 LLWEIYS 194
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 28/193 (14%)
Query: 164 ISRGGFGSIH--KARIQDRMEFSVKGFHLQCSGAFKSFDFECD---VMKSTCYRNLIKII 218
+ G FG +H ++R R +++K + K + D ++ + +I++
Sbjct: 14 LGTGSFGRVHLIRSRHNGRY-YAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMW 72
Query: 219 SSRSNEDFKVLVLEYMPRGSLEKCLYSSNY------------VGFALEYLHFDYSVLIIH 266
+ + ++++Y+ G L L S V ALEYLH S II+
Sbjct: 73 GTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH---SKDIIY 129
Query: 267 YDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFM------IQTQTLATIGYMASY-VYSF 319
DLKP N+L D N ++DFG AK + + + I + ++T Y S +SF
Sbjct: 130 RDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSF 189
Query: 320 GIMLLEVFTRKKP 332
GI++ E+ P
Sbjct: 190 GILIYEMLAGYTP 202
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 18/109 (16%)
Query: 232 EYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
E + L C Y V +EYL S IH DL NVL ++ V ++DFG+A+
Sbjct: 145 EQLSSKDLVSCAYQ---VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 292 LLIREDHFMIQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
+ D T + +MA S V+SFG++L E+FT
Sbjct: 199 DIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 38/165 (23%)
Query: 202 ECDVMKSTC-YRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEY----- 255
E ++MK ++N+I ++ + + + +++EY +G+L + L + G Y
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 256 --------------------LHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIR 295
+ + S IH DL NVL +N V ++DFG+A+ +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 296 EDHFMIQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
D T + +MA S V+SFG+++ E+FT
Sbjct: 210 IDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 24/157 (15%)
Query: 195 AFKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYS--------- 245
A F E + M S +RNLI++ K +V E P GSL L
Sbjct: 64 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT 122
Query: 246 -SNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIR-EDHFMIQT 303
S Y E + + S IH DL N+L + + DFG+ + L + +DH ++Q
Sbjct: 123 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQE 182
Query: 304 -----------QTLATIGYM-ASYVYSFGIMLLEVFT 328
++L T + AS + FG+ L E+FT
Sbjct: 183 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 15/103 (14%)
Query: 238 SLEKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRED 297
++E + S V +E+L S IH DL N+L +N V + DFG+A+ + +
Sbjct: 197 TMEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNP 253
Query: 298 HFMIQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
++ + T + +MA S V+S+G++L E+F+
Sbjct: 254 DYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 20/132 (15%)
Query: 211 YRNLIKIISSRSNE--DFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHYD 268
+ NL + S+ NE +K L +++ +LE + S V +E+L S IH D
Sbjct: 116 FGNLSTYLRSKRNEFVPYKDLYKDFL---TLEHLICYSFQVAKGMEFL---ASRKXIHRD 169
Query: 269 LKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYV 316
L N+L + V + DFG+A+ + ++ ++ + + +MA S V
Sbjct: 170 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 229
Query: 317 YSFGIMLLEVFT 328
+SFG++L E+F+
Sbjct: 230 WSFGVLLWEIFS 241
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 24/157 (15%)
Query: 195 AFKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYS--------- 245
A F E + M S +RNLI++ K +V E P GSL L
Sbjct: 54 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT 112
Query: 246 -SNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIR-EDHFMIQT 303
S Y E + + S IH DL N+L + + DFG+ + L + +DH ++Q
Sbjct: 113 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQE 172
Query: 304 QTLATIGYM------------ASYVYSFGIMLLEVFT 328
+ AS + FG+ L E+FT
Sbjct: 173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY PRG + K L ++ Y+ L + +S +IH D+K
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 141 PENLLLGSAGELKIADFG 158
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 240 EKC--LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRED 297
E C Y++ V ALEYLH IIH DLKP N+L ++++ ++DFG AK+L E
Sbjct: 136 ETCTRFYTAEIVS-ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 191
Query: 298 HFMIQTQTLATIGYMA 313
+ T Y++
Sbjct: 192 KQARANXFVGTAQYVS 207
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 28/187 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
I +G FG + + D V ++ ++F E VM + NL++++
Sbjct: 201 IGKGEFGDVM---LGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 224 EDFKV-LVLEYMPRGSLEKCLYSSNY--------------VGFALEYLHFDYSVLIIHYD 268
E + +V EYM +GSL L S V A+EYL + +H D
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 314
Query: 269 LKPSNVLFDDNIVTHLSDFGIAKLLIR-EDHFMIQTQTLATIGY------MASYVYSFGI 321
L NVL ++ V +SDFG+ K +D + + A S V+SFGI
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGI 374
Query: 322 MLLEVFT 328
+L E+++
Sbjct: 375 LLWEIYS 381
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY PRG + K L ++ Y+ L + +S +IH D+K
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 141 PENLLLGSAGELKIADFG 158
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 28/187 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
I +G FG + + D V ++ ++F E VM + NL++++
Sbjct: 29 IGKGEFGDVM---LGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 224 EDFKV-LVLEYMPRGSLEKCLYSSNY--------------VGFALEYLHFDYSVLIIHYD 268
E + +V EYM +GSL L S V A+EYL + +H D
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 142
Query: 269 LKPSNVLFDDNIVTHLSDFGIAKLLIR-EDHFMIQTQTLATIGY------MASYVYSFGI 321
L NVL ++ V +SDFG+ K +D + + A S V+SFGI
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGI 202
Query: 322 MLLEVFT 328
+L E+++
Sbjct: 203 LLWEIYS 209
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 30/163 (18%)
Query: 155 TNGFSED----NLISRGGFG----SIHKARIQDRMEFSVKGFHLQCSGAFKSFDF----- 201
T+GF E+ ++ RG IHK + E++VK + G+F + +
Sbjct: 12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCK---EYAVKIIDVTGGGSFSAEEVQELRE 68
Query: 202 ----ECDVM-KSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL-----EKCLYSSNY--- 248
E D++ K + + N+I++ + F LV + M +G L EK S
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 249 -VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIA 290
+ LE + + + I+H DLKP N+L DD++ L+DFG +
Sbjct: 129 IMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 30/163 (18%)
Query: 155 TNGFSED----NLISRGGFG----SIHKARIQDRMEFSVKGFHLQCSGAFKSFDF----- 201
T+GF E+ ++ RG IHK + E++VK + G+F + +
Sbjct: 12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCK---EYAVKIIDVTGGGSFSAEEVQELRE 68
Query: 202 ----ECDVM-KSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL-----EKCLYSSNY--- 248
E D++ K + + N+I++ + F LV + M +G L EK S
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 249 -VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIA 290
+ LE + + + I+H DLKP N+L DD++ L+DFG +
Sbjct: 129 IMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 22/138 (15%)
Query: 172 IHKARIQDRMEFSVKGFHLQCSGAFKSFDF---------ECDVM-KSTCYRNLIKIISSR 221
IHK + E++VK + G+F + + E D++ K + + N+I++ +
Sbjct: 24 IHKPTCK---EYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 80
Query: 222 SNEDFKVLVLEYMPRGSL-----EKCLYSSNY----VGFALEYLHFDYSVLIIHYDLKPS 272
F LV + M +G L EK S + LE + + + I+H DLKP
Sbjct: 81 ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPE 140
Query: 273 NVLFDDNIVTHLSDFGIA 290
N+L DD++ L+DFG +
Sbjct: 141 NILLDDDMNIKLTDFGFS 158
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 65/138 (47%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVKGF---HLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q++ ++K L+ G E ++ + N++++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LE+ PRG L K L S+ ++ + LH+ + +IH D+K
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIK 142
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 143 PENLLMGYKGELKIADFG 160
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 65/138 (47%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVKGF---HLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q++ ++K L+ G E ++ + N++++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LE+ PRG L K L S+ ++ + LH+ + +IH D+K
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIK 141
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 142 PENLLMGYKGELKIADFG 159
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 65/138 (47%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVKGF---HLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q++ ++K L+ G E ++ + N++++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LE+ PRG L K L S+ ++ + LH+ + +IH D+K
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIK 141
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 142 PENLLMGYKGELKIADFG 159
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 85/192 (44%), Gaps = 28/192 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ G FG + + + + + ++K + S + F E VM + + L+++ +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 224 EDFKVLVLEYMPRGSL-------------EKCLYSSNYVGFALEYLHFDYSVLIIHYDLK 270
+ ++ EYM G L ++ L V A+EYL S +H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 147
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDH-------FMIQTQTLATIGY----MASYVYSF 319
N L +D V +SDFG+++ ++ +++ F ++ + Y S +++F
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 207
Query: 320 GIMLLEVFTRKK 331
G+++ E+++ K
Sbjct: 208 GVLMWEIYSLGK 219
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 18/95 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE--DHFMIQTQTLATI 309
L+Y+H S +IH DLKPSN+L ++N + DFG+A+ L +H T+ +AT
Sbjct: 171 GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 310 GYMASY-------------VYSFGIMLLEVFTRKK 331
Y A ++S G + E+ R++
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVKGF---HLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIK 139
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L N ++DFG
Sbjct: 140 PENLLLGSNGELKIADFG 157
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 12/76 (15%)
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA----------- 313
IH D+ NVL + V + DFG+A+ ++ + +++++ + +MA
Sbjct: 180 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV 239
Query: 314 -SYVYSFGIMLLEVFT 328
S V+S+GI+L E+F+
Sbjct: 240 QSDVWSYGILLWEIFS 255
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 84/192 (43%), Gaps = 28/192 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ G FG + + + + + ++K + S + F E VM + + L+++ +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 224 EDFKVLVLEYMPRGSL-------------EKCLYSSNYVGFALEYLHFDYSVLIIHYDLK 270
+ ++ EYM G L ++ L V A+EYL S +H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 147
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDH-------FMIQTQTLATIGY----MASYVYSF 319
N L +D V +SDFG+++ ++ ++ F ++ + Y S +++F
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 207
Query: 320 GIMLLEVFTRKK 331
G+++ E+++ K
Sbjct: 208 GVLMWEIYSLGK 219
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 85/192 (44%), Gaps = 28/192 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ G FG + + + + + ++K + S + F E VM + + L+++ +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 224 EDFKVLVLEYMPRGSL-------------EKCLYSSNYVGFALEYLHFDYSVLIIHYDLK 270
+ ++ EYM G L ++ L V A+EYL S +H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 132
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDH-------FMIQTQTLATIGY----MASYVYSF 319
N L +D V +SDFG+++ ++ +++ F ++ + Y S +++F
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAF 192
Query: 320 GIMLLEVFTRKK 331
G+++ E+++ K
Sbjct: 193 GVLMWEIYSLGK 204
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVKGF---HLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIK 139
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L N ++DFG
Sbjct: 140 PENLLLGSNGELKIADFG 157
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 85/192 (44%), Gaps = 28/192 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ G FG + + + + + ++K + S + F E VM + + L+++ +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 224 EDFKVLVLEYMPRGSL-------------EKCLYSSNYVGFALEYLHFDYSVLIIHYDLK 270
+ ++ EYM G L ++ L V A+EYL S +H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 132
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDH-------FMIQTQTLATIGY----MASYVYSF 319
N L +D V +SDFG+++ ++ +++ F ++ + Y S +++F
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 192
Query: 320 GIMLLEVFTRKK 331
G+++ E+++ K
Sbjct: 193 GVLMWEIYSLGK 204
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 85/192 (44%), Gaps = 28/192 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ G FG + + + + + ++K + S + F E VM + + L+++ +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 224 EDFKVLVLEYMPRGSL-------------EKCLYSSNYVGFALEYLHFDYSVLIIHYDLK 270
+ ++ EYM G L ++ L V A+EYL S +H DL
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 138
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDH-------FMIQTQTLATIGY----MASYVYSF 319
N L +D V +SDFG+++ ++ +++ F ++ + Y S +++F
Sbjct: 139 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 198
Query: 320 GIMLLEVFTRKK 331
G+++ E+++ K
Sbjct: 199 GVLMWEIYSLGK 210
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 92/216 (42%), Gaps = 45/216 (20%)
Query: 158 FSEDNLISRGGFGSIHKARIQDR----MEFSVKGFHLQ--CSGAFKSFDFECDVMKSTCY 211
F+ ++ +G FGS+ +A+++ ++ +VK S + F E MK +
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 212 RNLIKII--SSRSNEDFK----VLVLEYMPRGSLEKCLYSSNY----------------- 248
++ K++ S RS + +++L +M G L L +S
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 249 -VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLA 307
+ +EYL S IH DL N + +++ ++DFG+++ + D++ +
Sbjct: 145 DIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 308 TIGYMA------------SYVYSFGIMLLEVFTRKK 331
+ ++A S V++FG+ + E+ TR +
Sbjct: 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQ 237
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 85/192 (44%), Gaps = 28/192 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ G FG + + + + + ++K + S + F E VM + + L+++ +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 224 EDFKVLVLEYMPRGSL-------------EKCLYSSNYVGFALEYLHFDYSVLIIHYDLK 270
+ ++ EYM G L ++ L V A+EYL S +H DL
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 131
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDH-------FMIQTQTLATIGY----MASYVYSF 319
N L +D V +SDFG+++ ++ +++ F ++ + Y S +++F
Sbjct: 132 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 191
Query: 320 GIMLLEVFTRKK 331
G+++ E+++ K
Sbjct: 192 GVLMWEIYSLGK 203
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 22/122 (18%)
Query: 194 GAFKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL 253
G FKS D+M+S +L +II S + L LE++ R L + L L
Sbjct: 129 GEFKSVYVVLDLMES----DLHQIIHSS-----QPLTLEHV-RYFLYQLLR-------GL 171
Query: 254 EYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE--DHFMIQTQTLATIGY 311
+Y+H S +IH DLKPSN+L ++N + DFG+A+ L +H T+ +AT Y
Sbjct: 172 KYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWY 228
Query: 312 MA 313
A
Sbjct: 229 RA 230
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 85/192 (44%), Gaps = 28/192 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ G FG + + + + + ++K + S + F E VM + + L+++ +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 224 EDFKVLVLEYMPRGSL-------------EKCLYSSNYVGFALEYLHFDYSVLIIHYDLK 270
+ ++ EYM G L ++ L V A+EYL S +H DL
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLA 127
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIREDH-------FMIQTQTLATIGY----MASYVYSF 319
N L +D V +SDFG+++ ++ +++ F ++ + Y S +++F
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 187
Query: 320 GIMLLEVFTRKK 331
G+++ E+++ K
Sbjct: 188 GVLMWEIYSLGK 199
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 211 YRNLIKIISSRSNE--DFKVLVLE-YMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHY 267
+ NL + S+ NE +KV + Y +LE + S V +E+L S IH
Sbjct: 107 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHR 163
Query: 268 DLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SY 315
DL N+L + V + DFG+A+ + ++ ++ + + +MA S
Sbjct: 164 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 223
Query: 316 VYSFGIMLLEVFT 328
V+SFG++L E+F+
Sbjct: 224 VWSFGVLLWEIFS 236
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 211 YRNLIKIISSRSNE--DFKVLVLE-YMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHY 267
+ NL + S+ NE +KV + Y +LE + S V +E+L S IH
Sbjct: 116 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHR 172
Query: 268 DLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SY 315
DL N+L + V + DFG+A+ + ++ ++ + + +MA S
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 232
Query: 316 VYSFGIMLLEVFT 328
V+SFG++L E+F+
Sbjct: 233 VWSFGVLLWEIFS 245
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Query: 238 SLEKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRED 297
+LE + S V +E+L S IH DL N+L + V + DFG+A+ + ++
Sbjct: 191 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247
Query: 298 HFMIQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
++ + + +MA S V+SFG++L E+F+
Sbjct: 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 92/214 (42%), Gaps = 45/214 (21%)
Query: 147 SCLELCRVTNGFSEDNLISRGGFGSIHKARIQ--DRMEFSVKGFHLQCSGAFKSF-DFEC 203
SC+++ RV I G FG + R++ + + +V L+ K DF C
Sbjct: 43 SCIKIERV---------IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLC 93
Query: 204 D--VMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY------------- 248
+ +M + N++ + + ++V+E+M G+L+ L +
Sbjct: 94 EASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRG 153
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT 308
+ + YL + +H DL N+L + N+V +SDFG+++ +I +D + T T
Sbjct: 154 IAAGMRYLA---DMGYVHRDLAARNILVNSNLVCKVSDFGLSR-VIEDDPEAVYTTTGGK 209
Query: 309 IGYM--------------ASYVYSFGIMLLEVFT 328
I AS V+S+GI++ EV +
Sbjct: 210 IPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 211 YRNLIKIISSRSNE--DFKVLVLE-YMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHY 267
+ NL + S+ NE +KV + Y +LE + S V +E+L S IH
Sbjct: 153 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHR 209
Query: 268 DLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SY 315
DL N+L + V + DFG+A+ + ++ ++ + + +MA S
Sbjct: 210 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 269
Query: 316 VYSFGIMLLEVFT 328
V+SFG++L E+F+
Sbjct: 270 VWSFGVLLWEIFS 282
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 46/173 (26%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYS-------SNYV 249
++F E VM+ + N++K I + + EY+ G+L + S S V
Sbjct: 52 RTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRV 111
Query: 250 GFA------LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQT 303
FA + YLH S+ IIH DL N L +N ++DFG+A+L++ E Q
Sbjct: 112 SFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK---TQP 165
Query: 304 QTLATIG---------------YMA-------SY-----VYSFGIMLLEVFTR 329
+ L ++ +MA SY V+SFGI+L E+ R
Sbjct: 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 18/117 (15%)
Query: 202 ECDVMKSTCYRNLIKI--ISSRSNEDFKVLVLEYMPRGSLEKCLYS-SNYVGF-ALEYLH 257
E +V+K ++N++K+ I + KVL++E+ P GSL L SN G E+L
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 258 FDYSVL----------IIHYDLKPSNVLF----DDNIVTHLSDFGIAKLLIREDHFM 300
V+ I+H ++KP N++ D V L+DFG A+ L ++ F+
Sbjct: 117 VLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV 173
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 211 YRNLIKIISSRSNE--DFKVLVLE-YMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHY 267
+ NL + S+ NE +KV + Y +LE + S V +E+L S IH
Sbjct: 107 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHR 163
Query: 268 DLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SY 315
DL N+L + V + DFG+A+ + ++ ++ + + +MA S
Sbjct: 164 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 223
Query: 316 VYSFGIMLLEVFT 328
V+SFG++L E+F+
Sbjct: 224 VWSFGVLLWEIFS 236
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Query: 238 SLEKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRED 297
+LE + S V +E+L S IH DL N+L + V + DFG+A+ + ++
Sbjct: 196 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 252
Query: 298 HFMIQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
++ + + +MA S V+SFG++L E+F+
Sbjct: 253 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Query: 238 SLEKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRED 297
+LE + S V +E+L S IH DL N+L + V + DFG+A+ + ++
Sbjct: 198 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 254
Query: 298 HFMIQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
++ + + +MA S V+SFG++L E+F+
Sbjct: 255 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Query: 238 SLEKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRED 297
+LE + S V +E+L S IH DL N+L + V + DFG+A+ + ++
Sbjct: 148 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 204
Query: 298 HFMIQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
++ + + +MA S V+SFG++L E+F+
Sbjct: 205 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Query: 238 SLEKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRED 297
+LE + S V +E+L S IH DL N+L + V + DFG+A+ + ++
Sbjct: 189 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 245
Query: 298 HFMIQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
++ + + +MA S V+SFG++L E+F+
Sbjct: 246 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 84/206 (40%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIH----KARIQDRMEFSVKGFHLQCSGAFKS---FDFECDVMKSTCYRNLIK 216
+ +G FG ++ K ++D E V + + + + F E VMK ++++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 217 IISSRSNEDFKVLVLEYMPRG----------------------SLEKCLYSSNYVGFALE 254
++ S ++++E M RG SL K + + + +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 255 YLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA- 313
YL+ + +H DL N + ++ + DFG+ + + D++ + L + +M+
Sbjct: 146 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 314 -----------SYVYSFGIMLLEVFT 328
S V+SFG++L E+ T
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 84/206 (40%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIH----KARIQDRMEFSVKGFHLQCSGAFKS---FDFECDVMKSTCYRNLIK 216
+ +G FG ++ K ++D E V + + + + F E VMK ++++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 217 IISSRSNEDFKVLVLEYMPRG----------------------SLEKCLYSSNYVGFALE 254
++ S ++++E M RG SL K + + + +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 255 YLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA- 313
YL+ + +H DL N + ++ + DFG+ + + D++ + L + +M+
Sbjct: 140 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 314 -----------SYVYSFGIMLLEVFT 328
S V+SFG++L E+ T
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 18/117 (15%)
Query: 202 ECDVMKSTCYRNLIKI--ISSRSNEDFKVLVLEYMPRGSLEKCLYS-SNYVGF-ALEYLH 257
E +V+K ++N++K+ I + KVL++E+ P GSL L SN G E+L
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 258 FDYSVL----------IIHYDLKPSNVLF----DDNIVTHLSDFGIAKLLIREDHFM 300
V+ I+H ++KP N++ D V L+DFG A+ L ++ F+
Sbjct: 117 VLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV 173
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 84/206 (40%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIH----KARIQDRMEFSVKGFHLQCSGAFKS---FDFECDVMKSTCYRNLIK 216
+ +G FG ++ K ++D E V + + + + F E VMK ++++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 217 IISSRSNEDFKVLVLEYMPRG----------------------SLEKCLYSSNYVGFALE 254
++ S ++++E M RG SL K + + + +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 255 YLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA- 313
YL+ + +H DL N + ++ + DFG+ + + D++ + L + +M+
Sbjct: 153 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 314 -----------SYVYSFGIMLLEVFT 328
S V+SFG++L E+ T
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 242 CLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMI 301
CL+ + A+E+LH S ++H DLKPSN+ F + V + DFG+ + +++
Sbjct: 166 CLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE---- 218
Query: 302 QTQTLATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
+ QT+ T M +Y G + +++ + + +S + DI +LG
Sbjct: 219 EEQTVLTP--MPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLG 263
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 32/193 (16%)
Query: 164 ISRGGFGSIHKARIQ-DRMEFSVKGFHLQCSGAFKS-FDFECDVMKSTCYRNLIKIISSR 221
I RG FG + R++ D +VK K+ F E ++K + N++++I
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 222 SNEDFKVLVLEYMPRGSLEKCLYSS----------NYVGFALEYLHFDYSVLIIHYDLKP 271
+ + +V+E + G L + VG A + + S IH DL
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAA 241
Query: 272 SNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT----LATIGYMA------------SY 315
N L + V +SDFG++ RE+ + + + + A S
Sbjct: 242 RNCLVTEKNVLKISDFGMS----REEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 316 VYSFGIMLLEVFT 328
V+SFGI+L E F+
Sbjct: 298 VWSFGILLWETFS 310
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 77/190 (40%), Gaps = 24/190 (12%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ G FG + + + + + +VK + S + F E M + L+K S
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 224 EDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVL----------IIHYDLKPSN 273
E +V EY+ G L L S + L Y V IH DL N
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARN 134
Query: 274 VLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSFGI 321
L D ++ +SDFG+ + ++ +D ++ T + + A S V++FGI
Sbjct: 135 CLVDRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGI 193
Query: 322 MLLEVFTRKK 331
++ EVF+ K
Sbjct: 194 LMWEVFSLGK 203
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 84/206 (40%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIH----KARIQDRMEFSVKGFHLQCSGAFKS---FDFECDVMKSTCYRNLIK 216
+ +G FG ++ K ++D E V + + + + F E VMK ++++
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 217 IISSRSNEDFKVLVLEYMPRG----------------------SLEKCLYSSNYVGFALE 254
++ S ++++E M RG SL K + + + +
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 255 YLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA- 313
YL+ + +H DL N + ++ + DFG+ + + D++ + L + +M+
Sbjct: 143 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 199
Query: 314 -----------SYVYSFGIMLLEVFT 328
S V+SFG++L E+ T
Sbjct: 200 ESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 94/226 (41%), Gaps = 39/226 (17%)
Query: 122 CLNILQHLFLGYNRLQGSISYSKWFSC-LELCRVTNGFSEDNLISRGGFGSIHKARIQDR 180
C N+ +F + + +W + L + N FS +I RGGFG ++ R D
Sbjct: 153 CQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKAD- 211
Query: 181 MEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRS------------NEDFKV 228
+ K + ++C K + + R ++ ++S+ D
Sbjct: 212 ---TGKMYAMKCLDK-KRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 267
Query: 229 LVLEYMPRGSL-----EKCLYSSNYVGF-------ALEYLHFDYSVLIIHYDLKPSNVLF 276
+L+ M G L + ++S + F LE++H + +++ DLKP+N+L
Sbjct: 268 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILL 324
Query: 277 DDNIVTHLSDFGIA-KLLIREDHFMIQTQTLATIGYMASYVYSFGI 321
D++ +SD G+A ++ H ++ T GYMA V G+
Sbjct: 325 DEHGHVRISDLGLACDFSKKKPH-----ASVGTHGYMAPEVLQKGV 365
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 94/226 (41%), Gaps = 39/226 (17%)
Query: 122 CLNILQHLFLGYNRLQGSISYSKWFSC-LELCRVTNGFSEDNLISRGGFGSIHKARIQDR 180
C N+ +F + + +W + L + N FS +I RGGFG ++ R D
Sbjct: 154 CQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKAD- 212
Query: 181 MEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRS------------NEDFKV 228
+ K + ++C K + + R ++ ++S+ D
Sbjct: 213 ---TGKMYAMKCLDK-KRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268
Query: 229 LVLEYMPRGSL-----EKCLYSSNYVGF-------ALEYLHFDYSVLIIHYDLKPSNVLF 276
+L+ M G L + ++S + F LE++H + +++ DLKP+N+L
Sbjct: 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILL 325
Query: 277 DDNIVTHLSDFGIA-KLLIREDHFMIQTQTLATIGYMASYVYSFGI 321
D++ +SD G+A ++ H ++ T GYMA V G+
Sbjct: 326 DEHGHVRISDLGLACDFSKKKPH-----ASVGTHGYMAPEVLQKGV 366
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 84/206 (40%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIH----KARIQDRMEFSVKGFHLQCSGAFKS---FDFECDVMKSTCYRNLIK 216
+ +G FG ++ K ++D E V + + + + F E VMK ++++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 217 IISSRSNEDFKVLVLEYMPRG----------------------SLEKCLYSSNYVGFALE 254
++ S ++++E M RG SL K + + + +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 255 YLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA- 313
YL+ + +H DL N + ++ + DFG+ + + D++ + L + +M+
Sbjct: 153 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 314 -----------SYVYSFGIMLLEVFT 328
S V+SFG++L E+ T
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 52/215 (24%)
Query: 165 SRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFD--FECDVMKSTCYRNLIKIISSR- 221
+RG FG + KA++ + +VK F LQ +++S F MK + NL++ I++
Sbjct: 24 ARGRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQSEREIFSTPGMK---HENLLQFIAAEK 79
Query: 222 --SNEDFKV-LVLEYMPRGSLEKCL-----------YSSNYVGFALEYLHFD-------- 259
SN + ++ L+ + +GSL L + + + L YLH D
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 260 YSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIG---YMASYV 316
+ I H D K NVL ++ L+DFG+A +R + T +G YMA V
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLA---VRFEPGKPPGDTHGQVGTRRYMAPEV 196
Query: 317 -----------------YSFGIMLLEVFTRKKPTN 334
Y+ G++L E+ +R K +
Sbjct: 197 LEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 242 CLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMI 301
CL+ + A+E+LH S ++H DLKPSN+ F + V + DFG+ + +++
Sbjct: 120 CLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE---- 172
Query: 302 QTQTLATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
+ QT+ T M +Y G + +++ + + +S + DI +LG
Sbjct: 173 EEQTVLTP--MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLG 217
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 32/146 (21%)
Query: 213 NLIKII----SSRSNEDFKV-LVLEYMPRGSLEKCLYSSNYVGFALEY-----------L 256
N+++++ +SR++ + KV LV E++ + L L + G E L
Sbjct: 75 NVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGL 133
Query: 257 HFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV 316
F ++ I+H DLKP N+L L+DFG+A++ + M T + T+ Y A V
Sbjct: 134 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALTPVVVTLWYRAPEV 190
Query: 317 ------------YSFGIMLLEVFTRK 330
+S G + E+F RK
Sbjct: 191 LLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 75/189 (39%), Gaps = 24/189 (12%)
Query: 164 ISRGGFGSIHKARIQ-DRMEFSVKGFHLQCSGAFKS-FDFECDVMKSTCYRNLIKIISSR 221
I RG FG + R++ D +VK K+ F E ++K + N++++I
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 222 SNEDFKVLVLEYMPRGSLEKCLYSS----------NYVGFALEYLHFDYSVLIIHYDLKP 271
+ + +V+E + G L + VG A + + S IH DL
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAA 241
Query: 272 SNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSF 319
N L + V +SDFG+++ + + + A S V+SF
Sbjct: 242 RNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSF 301
Query: 320 GIMLLEVFT 328
GI+L E F+
Sbjct: 302 GILLWETFS 310
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 20/108 (18%)
Query: 253 LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYM 312
L L F +S ++H DLKP N+L + L+DFG+A++ + M T + T+ Y
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYR 186
Query: 313 ASYV------------YSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
A V +S G + E+F R+KP F +D+ LG
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMF-RRKP----LFRGSSDVDQLG 229
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 22/98 (22%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGY 311
AL YL + V IH D+KPSN+L D+ L DFGI+ L+ + + ++ Y
Sbjct: 136 ALYYLKEKHGV--IHRDVKPSNILLDERGQIKLCDFGISGRLVDD---KAKDRSAGCAAY 190
Query: 312 MA-----------------SYVYSFGIMLLEVFTRKKP 332
MA + V+S GI L+E+ T + P
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 94/226 (41%), Gaps = 39/226 (17%)
Query: 122 CLNILQHLFLGYNRLQGSISYSKWFSC-LELCRVTNGFSEDNLISRGGFGSIHKARIQDR 180
C N+ +F + + +W + L + N FS +I RGGFG ++ R D
Sbjct: 154 CQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKAD- 212
Query: 181 MEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRS------------NEDFKV 228
+ K + ++C K + + R ++ ++S+ D
Sbjct: 213 ---TGKMYAMKCLDK-KRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268
Query: 229 LVLEYMPRGSL-----EKCLYSSNYVGF-------ALEYLHFDYSVLIIHYDLKPSNVLF 276
+L+ M G L + ++S + F LE++H + +++ DLKP+N+L
Sbjct: 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILL 325
Query: 277 DDNIVTHLSDFGIA-KLLIREDHFMIQTQTLATIGYMASYVYSFGI 321
D++ +SD G+A ++ H ++ T GYMA V G+
Sbjct: 326 DEHGHVRISDLGLACDFSKKKPH-----ASVGTHGYMAPEVLQKGV 366
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 94/226 (41%), Gaps = 39/226 (17%)
Query: 122 CLNILQHLFLGYNRLQGSISYSKWFSC-LELCRVTNGFSEDNLISRGGFGSIHKARIQDR 180
C N+ +F + + +W + L + N FS +I RGGFG ++ R D
Sbjct: 154 CQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKAD- 212
Query: 181 MEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRS------------NEDFKV 228
+ K + ++C K + + R ++ ++S+ D
Sbjct: 213 ---TGKMYAMKCLDK-KRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268
Query: 229 LVLEYMPRGSL-----EKCLYSSNYVGF-------ALEYLHFDYSVLIIHYDLKPSNVLF 276
+L+ M G L + ++S + F LE++H + +++ DLKP+N+L
Sbjct: 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILL 325
Query: 277 DDNIVTHLSDFGIA-KLLIREDHFMIQTQTLATIGYMASYVYSFGI 321
D++ +SD G+A ++ H ++ T GYMA V G+
Sbjct: 326 DEHGHVRISDLGLACDFSKKKPH-----ASVGTHGYMAPEVLQKGV 366
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 87/203 (42%), Gaps = 40/203 (19%)
Query: 161 DNLISRGGFGSIHKARIQ--DRMEFSV-----KGFHLQCSGAFKSFDFECDVMKSTCYRN 213
+ +I G FG + + R++ + E V KG + + + F E +M + N
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ--RREFLSEASIMGQFEHPN 78
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFDY 260
+I++ +N +++ E+M G+L+ L ++ + + YL
Sbjct: 79 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA--- 135
Query: 261 SVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLA-----------TI 309
+ +H DL N+L + N+V +SDFG+++ L +T +L I
Sbjct: 136 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 310 GYM----ASYVYSFGIMLLEVFT 328
+ AS +S+GI++ EV +
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 84/206 (40%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIH----KARIQDRMEFSVKGFHLQCSGAFKS---FDFECDVMKSTCYRNLIK 216
+ +G FG ++ K ++D E V + + + + F E VMK ++++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 217 IISSRSNEDFKVLVLEYMPRG----------------------SLEKCLYSSNYVGFALE 254
++ S ++++E M RG SL K + + + +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 255 YLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA- 313
YL+ + +H DL N + ++ + DFG+ + + D++ + L + +M+
Sbjct: 146 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 314 -----------SYVYSFGIMLLEVFT 328
S V+SFG++L E+ T
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 84/206 (40%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIH----KARIQDRMEFSVKGFHLQCSGAFKS---FDFECDVMKSTCYRNLIK 216
+ +G FG ++ K ++D E V + + + + F E VMK ++++
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 217 IISSRSNEDFKVLVLEYMPRG----------------------SLEKCLYSSNYVGFALE 254
++ S ++++E M RG SL K + + + +
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 255 YLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA- 313
YL+ + +H DL N + ++ + DFG+ + + D++ + L + +M+
Sbjct: 175 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 231
Query: 314 -----------SYVYSFGIMLLEVFT 328
S V+SFG++L E+ T
Sbjct: 232 ESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 19/95 (20%)
Query: 257 HFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA--- 313
H ++ IIH D+KPSN+L D + L DFGI+ L+ + +T+ YMA
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS---IAKTRDAGCRPYMAPER 196
Query: 314 -------------SYVYSFGIMLLEVFTRKKPTNK 335
S V+S GI L E+ T + P K
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGRFPYPK 231
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 84/206 (40%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIH----KARIQDRMEFSVKGFHLQCSGAFKS---FDFECDVMKSTCYRNLIK 216
+ +G FG ++ K ++D E V + + + + F E VMK ++++
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 217 IISSRSNEDFKVLVLEYMPRG----------------------SLEKCLYSSNYVGFALE 254
++ S ++++E M RG SL K + + + +
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 255 YLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA- 313
YL+ + +H DL N + ++ + DFG+ + + D++ + L + +M+
Sbjct: 144 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 200
Query: 314 -----------SYVYSFGIMLLEVFT 328
S V+SFG++L E+ T
Sbjct: 201 ESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 20/108 (18%)
Query: 253 LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYM 312
L L F +S ++H DLKP N+L + L+DFG+A++ + M T + T+ Y
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYR 186
Query: 313 ASYV------------YSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
A V +S G + E+F R+KP F +D+ LG
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMF-RRKP----LFRGSSDVDQLG 229
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 20/108 (18%)
Query: 253 LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYM 312
L L F +S ++H DLKP N+L + L+DFG+A++ + M T + T+ Y
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYR 186
Query: 313 ASYV------------YSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
A V +S G + E+F R+KP F +D+ LG
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMF-RRKP----LFRGSSDVDQLG 229
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 84/206 (40%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIH----KARIQDRMEFSVKGFHLQCSGAFKS---FDFECDVMKSTCYRNLIK 216
+ +G FG ++ K ++D E V + + + + F E VMK ++++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 217 IISSRSNEDFKVLVLEYMPRG----------------------SLEKCLYSSNYVGFALE 254
++ S ++++E M RG SL K + + + +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 255 YLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA- 313
YL+ + +H DL N + ++ + DFG+ + + D++ + L + +M+
Sbjct: 147 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 203
Query: 314 -----------SYVYSFGIMLLEVFT 328
S V+SFG++L E+ T
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 26/175 (14%)
Query: 155 TNGFSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQC-SGAFKSFDFECDVMKSTCYRN 213
T FSE L G + F+VK + G S + E V++ + N
Sbjct: 32 TGAFSEVVLAEEKATGKL----------FAVKCIPKKALKGKESSIENEIAVLRKIKHEN 81
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSL-----EKCLY----SSNYVGFALEYLHFDYSVLI 264
++ + + + LV++ + G L EK Y +S + L+ +++ + + I
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGI 141
Query: 265 IHYDLKPSNVLF---DDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV 316
+H DLKP N+L+ D+ +SDFG++K+ + D + + T GY+A V
Sbjct: 142 VHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGTPGYVAPEV 193
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 11 GWKINHLVRQKPTHKAVTNITFGLLVFIILCPRYNYPPL 49
G+ ++ QKP KAV + G++ +I+LC YPP
Sbjct: 187 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLC---GYPPF 222
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 74/192 (38%), Gaps = 27/192 (14%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
+ G +GS++KA I V + + E +M+ +++K S
Sbjct: 37 LGEGSYGSVYKA-IHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFK 95
Query: 224 EDFKVLVLEYMPRGSLE-------KCLYSSNYVGF------ALEYLHFDYSVLIIHYDLK 270
+V+EY GS+ K L LEYLHF + IH D+K
Sbjct: 96 NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIK 152
Query: 271 PSNVLFDDNIVTHLSDFGIAKLLIRE---------DHFMIQTQTLATIGY-MASYVYSFG 320
N+L + L+DFG+A L F + + + IGY + ++S G
Sbjct: 153 AGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLG 212
Query: 321 IMLLEVFTRKKP 332
I +E+ K P
Sbjct: 213 ITAIEMAEGKPP 224
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 143 SKWFSCLELCRVTNGFSEDNLISRGGFGSIHKAR-IQDRMEFSVKGFHLQCSGAFKSFDF 201
KW + + + F I G FG + + ++ +++K Q K +
Sbjct: 28 KKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH 87
Query: 202 ---ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF-- 251
E ++++ + L+K+ S + +V+EYMP G + L +S + F
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYA 147
Query: 252 -----ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 35/162 (21%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------- 248
+ F E +M + N+I + + +++ E+M GSL+ L ++
Sbjct: 79 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLV 138
Query: 249 -----VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQT 303
+ ++YL + +H DL N+L + N+V +SDFG+++ L ED T
Sbjct: 139 GMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL--EDDTSDPT 193
Query: 304 QTLATIGYM-----------------ASYVYSFGIMLLEVFT 328
T A G + AS V+S+GI++ EV +
Sbjct: 194 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 27/157 (17%)
Query: 180 RMEFSVKGFHLQC---SGAFK--SFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYM 234
+ + K F L+C S AF+ S + E V+K + N++ + + LV++ +
Sbjct: 29 KQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88
Query: 235 PRGSL-----EKCLYSSNYVGF-------ALEYLHFDYSVLIIHYDLKPSNVLF---DDN 279
G L E+ +Y+ A++YLH + I+H DLKP N+L+ ++N
Sbjct: 89 SGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEEN 145
Query: 280 IVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV 316
++DFG++K+ + I + T GY+A V
Sbjct: 146 SKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEV 178
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 11 GWKINHLVRQKPTHKAVTNITFGLLVFIILCPRYNYPPLRPPQQENLSLASNELISVIPS 70
G+ ++ QKP KAV + G++ +I+LC YPP + L E S
Sbjct: 172 GYVAPEVLAQKPYSKAVDCWSIGVITYILLC---GYPPFYEETESKLFEKIKEGYYEFES 228
Query: 71 TFWN 74
FW+
Sbjct: 229 PFWD 232
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 143 SKWFSCLELCRVTNGFSEDNLISRGGFGSIHKAR-IQDRMEFSVKGFHLQCSGAFKSFDF 201
KW + + + F I G FG + + ++ +++K Q K +
Sbjct: 28 KKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH 87
Query: 202 ---ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF-- 251
E ++++ + L+K+ S + +V+EYMP G + L +S + F
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYA 147
Query: 252 -----ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 26/136 (19%)
Query: 211 YRNLIKIISSRSNEDFKVLVLEYMPRG------SLEKCLYSSNYVGFALEYLHFDYSVLI 264
+ NL + S+ NE + Y P +LE + S V +E+L S
Sbjct: 118 FGNLSTYLRSKRNE-----FVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKX 169
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA----------- 313
IH DL N+L + V + DFG+A+ + ++ + + + +MA
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 314 -SYVYSFGIMLLEVFT 328
S V+SFG++L E+F+
Sbjct: 230 QSDVWSFGVLLWEIFS 245
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 50/223 (22%)
Query: 153 RVTNGFSEDNLISRGGFGSIHKAR-IQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCY 211
R + F E ++ +G FG + KAR D +++K + E ++ S +
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 212 -------------RNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEY--- 255
RN +K +++ + + +EY +L ++S N EY
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 256 -------LHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTL- 306
L + +S IIH DLKP N+ D++ + DFG+AK + R D + +Q L
Sbjct: 122 FRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 307 ----------ATIGYMASYV-------------YSFGIMLLEV 326
T Y+A+ V YS GI+ E+
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 17/132 (12%)
Query: 211 YRNLIKIISSRSNE--DFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHYD 268
+ NL + S+ NE +K Y +LE + S V +E+L S IH D
Sbjct: 117 FGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRD 173
Query: 269 LKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYV 316
L N+L + V + DFG+A+ + ++ + + + +MA S V
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 317 YSFGIMLLEVFT 328
+SFG++L E+F+
Sbjct: 234 WSFGVLLWEIFS 245
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 18/133 (13%)
Query: 211 YRNLIKIISSRSNE--DFKVLVLE-YMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHY 267
+ NL + S+ NE +KV + Y +LE + S V +E+L S IH
Sbjct: 116 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHR 172
Query: 268 DLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SY 315
DL N+L + V + DFG+A+ + ++ + + + +MA S
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSD 232
Query: 316 VYSFGIMLLEVFT 328
V+SFG++L E+F+
Sbjct: 233 VWSFGVLLWEIFS 245
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 18/133 (13%)
Query: 211 YRNLIKIISSRSNE--DFKVLVLE-YMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHY 267
+ NL + S+ NE +KV + Y +LE + S V +E+L S IH
Sbjct: 107 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHR 163
Query: 268 DLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SY 315
DL N+L + V + DFG+A+ + ++ + + + +MA S
Sbjct: 164 DLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSD 223
Query: 316 VYSFGIMLLEVFT 328
V+SFG++L E+F+
Sbjct: 224 VWSFGVLLWEIFS 236
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 18/133 (13%)
Query: 211 YRNLIKIISSRSNE--DFKVLVLE-YMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHY 267
+ NL + S+ NE +KV + Y +LE + S V +E+L S IH
Sbjct: 107 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHR 163
Query: 268 DLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SY 315
DL N+L + V + DFG+A+ + ++ + + + +MA S
Sbjct: 164 DLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSD 223
Query: 316 VYSFGIMLLEVFT 328
V+SFG++L E+F+
Sbjct: 224 VWSFGVLLWEIFS 236
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 31/196 (15%)
Query: 164 ISRGGFGSIHKARIQDR-----MEFSVKGFHLQCSGA-FKSFDFECDVMKSTCYRNLIKI 217
+ G FG + R + +VK + G E +++++ + N++K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 218 --ISSRSNEDFKVLVLEYMPRGSLEKCLYSS-------NYVGFALEYLH-FDY--SVLII 265
I + + L++E++P GSL++ L + + +A++ DY S +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV 148
Query: 266 HYDLKPSNVLFDDNIVTHLSDFGIAKLL--------IREDH----FMIQTQTLATIG-YM 312
H DL NVL + + DFG+ K + +++D F + L Y+
Sbjct: 149 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYI 208
Query: 313 ASYVYSFGIMLLEVFT 328
AS V+SFG+ L E+ T
Sbjct: 209 ASDVWSFGVTLHELLT 224
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 39/208 (18%)
Query: 155 TNGFSEDNLISRGGFG----SIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTC 210
T+G+ I G + IHKA MEF+VK + + +++
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKAT---NMEFAVKIIDKSKRDPTEEIEI---LLRYGQ 74
Query: 211 YRNLIKIISSRSNEDFKVLVLEYMPRGSL-EKCLYSSNY-----------VGFALEYLHF 258
+ N+I + + + +V E M G L +K L + + +EYLH
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH- 133
Query: 259 DYSVLIIHYDLKPSNVLFDDNI----VTHLSDFGIAKLLIREDHFM---------IQTQT 305
+ ++H DLKPSN+L+ D + DFG AK L E+ + + +
Sbjct: 134 --AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEV 191
Query: 306 LATIGYMAS-YVYSFGIMLLEVFTRKKP 332
L GY A+ ++S G++L + T P
Sbjct: 192 LERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 31/196 (15%)
Query: 164 ISRGGFGSIHKARIQDR-----MEFSVKGFHLQCSGA-FKSFDFECDVMKSTCYRNLIKI 217
+ G FG + R + +VK + G E +++++ + N++K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 218 --ISSRSNEDFKVLVLEYMPRGSLEKCLYSS-------NYVGFALEYLH-FDY--SVLII 265
I + + L++E++P GSL++ L + + +A++ DY S +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV 136
Query: 266 HYDLKPSNVLFDDNIVTHLSDFGIAKLL--------IREDH----FMIQTQTLATIG-YM 312
H DL NVL + + DFG+ K + +++D F + L Y+
Sbjct: 137 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYI 196
Query: 313 ASYVYSFGIMLLEVFT 328
AS V+SFG+ L E+ T
Sbjct: 197 ASDVWSFGVTLHELLT 212
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 63/218 (28%)
Query: 158 FSEDNLISRGGFGSIHKARIQ---------------DRMEFSVKGFH-------LQCSGA 195
F E LI GGFG + KA+ + ++ E VK + +G
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGC 72
Query: 196 FKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSS--------- 246
+ FD++ + T +N SSRS + +E+ +G+LE+ +
Sbjct: 73 WDGFDYDPE----TSSKN-----SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL 123
Query: 247 -----NYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMI 301
+ ++Y+H S +I+ DLKPSN+ D + DFG+ L +
Sbjct: 124 ALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK--- 177
Query: 302 QTQTLATIGYMASY------------VYSFGIMLLEVF 327
+ ++ T+ YM+ +Y+ G++L E+
Sbjct: 178 RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 83/206 (40%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIH----KARIQDRMEFSVKGFHLQCSGAFKS---FDFECDVMKSTCYRNLIK 216
+ +G FG ++ K ++D E V + + + + F E VMK ++++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 217 IISSRSNEDFKVLVLEYMPRG----------------------SLEKCLYSSNYVGFALE 254
++ S ++++E M RG SL K + + + +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 255 YLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA- 313
YL+ + +H DL N ++ + DFG+ + + D++ + L + +M+
Sbjct: 140 YLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 314 -----------SYVYSFGIMLLEVFT 328
S V+SFG++L E+ T
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 18/133 (13%)
Query: 211 YRNLIKIISSRSNE--DFKVLVLE-YMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHY 267
+ NL + S+ NE +KV + Y +LE + S V +E+L S IH
Sbjct: 116 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHR 172
Query: 268 DLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SY 315
DL N+L + V + DFG+A+ + ++ + + + +MA S
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSD 232
Query: 316 VYSFGIMLLEVFT 328
V+SFG++L E+F+
Sbjct: 233 VWSFGVLLWEIFS 245
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 15/141 (10%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCS--GAFKSFDFECDVMKSTCYRNLIKIISSR 221
+ G +G ++KA+ ++K L G + E ++K + N++ +I
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 222 SNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLH-FDYSVL----------IIHYDLK 270
+E LV E+M + L+K L N G + + Y +L I+H DLK
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVL-DENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLK 146
Query: 271 PSNVLFDDNIVTHLSDFGIAK 291
P N+L + + L+DFG+A+
Sbjct: 147 PQNLLINSDGALKLADFGLAR 167
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 87/209 (41%), Gaps = 44/209 (21%)
Query: 162 NLISRGGFGSIHKARIQDR----MEFSVKGFHLQCSGAFKSFDF--ECDVMKSTCYRNLI 215
++ G FGS+ + ++ ++ +VK L S + +F E MK + N+I
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 216 KIIS-----SRSNEDFKVLVLEYMPRGSLEKCLYSSNY------------------VGFA 252
+++ S +++L +M G L L S +
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 253 LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHF-----------MI 301
+EYL + +H DL N + D++ ++DFG++K + D++ I
Sbjct: 160 MEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 302 QTQTLATIGYMA-SYVYSFGIMLLEVFTR 329
++LA Y + S V++FG+ + E+ TR
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATR 245
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 15/139 (10%)
Query: 164 ISRGGFGSIHKARIQDR-----MEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKII 218
+ +G FG+++ AR + R ++ K L+ +G E ++ + N++++
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLRHPNILRLY 71
Query: 219 SSRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDL 269
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+
Sbjct: 72 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 131
Query: 270 KPSNVLFDDNIVTHLSDFG 288
KP N+L ++DFG
Sbjct: 132 KPENLLLGSAGELKIADFG 150
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 15/141 (10%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCS--GAFKSFDFECDVMKSTCYRNLIKIISSR 221
+ G +G ++KA+ ++K L G + E ++K + N++ +I
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 222 SNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLH-FDYSVL----------IIHYDLK 270
+E LV E+M + L+K L N G + + Y +L I+H DLK
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVL-DENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLK 146
Query: 271 PSNVLFDDNIVTHLSDFGIAK 291
P N+L + + L+DFG+A+
Sbjct: 147 PQNLLINSDGALKLADFGLAR 167
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL 293
A+EY H I+H DLKP N+L DDN+ ++DFG++ ++
Sbjct: 120 AIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIM 158
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 139
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 140 PENLLLGSAGELKIADFG 157
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 81/220 (36%), Gaps = 58/220 (26%)
Query: 164 ISRGGFGSIHKARIQDRMEF------SVKGFHLQCSGAFKS-FDFECDVMKSTCYRNLIK 216
I G FG + +AR + + +VK + S ++ F E +M N++K
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 217 IISSRSNEDFKVLVLEYMPRGSLEKCLYS------------------------------- 245
++ + L+ EYM G L + L S
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 246 -----SNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFM 300
+ V + YL +H DL N L +N+V ++DFG+++ + D++
Sbjct: 175 EQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 301 IQTQTLATIGYMA------------SYVYSFGIMLLEVFT 328
I +M S V+++G++L E+F+
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 134
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 135 PENLLLGSAGELKIADFG 152
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 15/92 (16%)
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT 308
+ +EYL S ++H DL NVL D + +SD G+ + + D++ + +L
Sbjct: 154 IAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 309 IGYMA------------SYVYSFGIMLLEVFT 328
I +MA S ++S+G++L EVF+
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 136 PENLLLGSAGELKIADFG 153
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+P G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 15/92 (16%)
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT 308
+ +EYL S ++H DL NVL D + +SD G+ + + D++ + +L
Sbjct: 137 IAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 309 IGYMA------------SYVYSFGIMLLEVFT 328
I +MA S ++S+G++L EVF+
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 82/206 (39%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIH----KARIQDRMEFSVKGFHLQCSGAFKS---FDFECDVMKSTCYRNLIK 216
+ +G FG ++ K ++D E V + + + + F E VMK ++++
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 217 IISSRSNEDFKVLVLEYMPRG----------------------SLEKCLYSSNYVGFALE 254
++ S ++++E M RG SL K + + + +
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 255 YLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA- 313
YL+ + +H DL N + ++ + DFG+ + + D + L + +M+
Sbjct: 138 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 194
Query: 314 -----------SYVYSFGIMLLEVFT 328
S V+SFG++L E+ T
Sbjct: 195 ESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+P G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+P G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 161
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 162 PENLLLGSAGELKIADFG 179
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 136 PENLLLGSAGELKIADFG 153
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 136 PENLLLGSAGELKIADFG 153
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 136 PENLLLGSAGELKIADFG 153
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ E DH T+ +AT
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 139 PENLLLGSAGELKIADFG 156
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 139 PENLLLGSAGELKIADFG 156
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+P G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+P G + L +S + F
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 171
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 172 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 136 PENLLLGSAGELKIADFG 153
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 139 PENLLLGSAGELKIADFG 156
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 136 PENLLLGSAGELKIADFG 153
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 20/143 (13%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
I +G F + AR I E +VK L S K F E +MK + N++K+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 73
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLYSSNYVG------------FALEYLHFDYSVLIIHY 267
E LV+EY G + L + ++ A++Y H + I+H
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF---IVHR 130
Query: 268 DLKPSNVLFDDNIVTHLSDFGIA 290
DLK N+L D ++ ++DFG +
Sbjct: 131 DLKAENLLLDADMNIKIADFGFS 153
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 139 PENLLLGSAGELKIADFG 156
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+P G + L +S + F
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 136
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 137 PENLLLGSAGELKIADFG 154
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 136 PENLLLGSAGELKIADFG 153
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+P G + L +S + F
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 29/152 (19%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYV------------ 249
E +VM+ ++++I E + +LV+E G L K L + +V
Sbjct: 420 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 478
Query: 250 GFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL-IREDHFMIQTQTLAT 308
++YL +H DL NVL +SDFG++K L E+++ QT
Sbjct: 479 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 535
Query: 309 IGYMA------------SYVYSFGIMLLEVFT 328
+ + A S V+SFG+++ E F+
Sbjct: 536 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+P G + L +S + F
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 32/146 (21%)
Query: 213 NLIKII----SSRSNEDFKV-LVLEYMPRGSLEKCLYSSNYVGFALEY-----------L 256
N+++++ +SR++ + KV LV E++ + L L + G E L
Sbjct: 67 NVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 257 HFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV 316
F ++ I+H DLKP N+L L+DFG+A++ + M + T+ Y A V
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALAPVVVTLWYRAPEV 182
Query: 317 ------------YSFGIMLLEVFTRK 330
+S G + E+F RK
Sbjct: 183 LLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCS--GAFKSFDFECDVMKSTCYRNLIKIISSR 221
I G +G ++KA+ F++K L+ G + E ++K + N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 222 SNEDFKVLVLEYMP---RGSLEKC---LYSSNYVGFALEYLH---FDYSVLIIHYDLKPS 272
+ VLV E++ + L+ C L S F L+ L+ + + ++H DLKP
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQ 129
Query: 273 NVLFDDNIVTHLSDFGIAK 291
N+L + ++DFG+A+
Sbjct: 130 NLLINREGELKIADFGLAR 148
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+P G + L +S + F
Sbjct: 77 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 136
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 137 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 175
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+P G + L +S + F
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 143 SKWFSCLELCRVTNGFSEDNLISRGGFGSIHKARIQDRM-EFSVKGFHLQCSGAFKSFDF 201
KW S + + F + G FG + + ++ +++K Q K +
Sbjct: 21 KKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH 80
Query: 202 ---ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF-- 251
E ++++ + L+K+ S + +V+EY+P G + L +S + F
Sbjct: 81 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 140
Query: 252 -----ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 141 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+P G + L +S + F
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+P G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+P G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA----------- 313
IH DL N+L +T + DFG+A+ + + +++++ + +MA
Sbjct: 183 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 242
Query: 314 -SYVYSFGIMLLEVFT 328
S V+S+GI L E+F+
Sbjct: 243 ESDVWSYGIFLWELFS 258
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 139 PENLLLGSAGELKIADFG 156
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 141 PENLLLGSAGELKIADFG 158
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 17/103 (16%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-------------YSSNY 248
E ++++ + L+K+ S + +V+EY+P G + L Y++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
V EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 V-LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 137
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 138 PENLLLGSAGELKIADFG 155
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 136
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 137 PENLLLGSAGELKIADFG 154
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 136
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 137 PENLLLGSAGELKIADFG 154
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA----------- 313
IH DL N+L +T + DFG+A+ + + +++++ + +MA
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 249
Query: 314 -SYVYSFGIMLLEVFT 328
S V+S+GI L E+F+
Sbjct: 250 ESDVWSYGIFLWELFS 265
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 17/103 (16%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-------------YSSNY 248
E ++++ + L+K+ S + +V+EY+P G + L Y++
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 151
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
V EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 152 V-LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 29/152 (19%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYV------------ 249
E +VM+ ++++I E + +LV+E G L K L + +V
Sbjct: 421 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 479
Query: 250 GFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL-IREDHFMIQTQTLAT 308
++YL +H DL NVL +SDFG++K L E+++ QT
Sbjct: 480 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 536
Query: 309 IGYMA------------SYVYSFGIMLLEVFT 328
+ + A S V+SFG+++ E F+
Sbjct: 537 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 17/103 (16%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-------------YSSNY 248
E ++++ + L+K+ S + +V+EY+P G + L Y++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
V EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 V-LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT 308
A++YLH + I+H DLKP N+L+ D++ +SDFG++K+ ED + + T
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGT 181
Query: 309 IGYMASYV 316
GY+A V
Sbjct: 182 PGYVAPEV 189
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 11 GWKINHLVRQKPTHKAVTNITFGLLVFIILCPRYNYPP 48
G+ ++ QKP KAV + G++ +I+LC YPP
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLC---GYPP 217
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCS--GAFKSFDFECDVMKSTCYRNLIKIISSR 221
I G +G ++KA+ F++K L+ G + E ++K + N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 222 SNEDFKVLVLEYMP---RGSLEKC---LYSSNYVGFALEYLH---FDYSVLIIHYDLKPS 272
+ VLV E++ + L+ C L S F L+ L+ + + ++H DLKP
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQ 129
Query: 273 NVLFDDNIVTHLSDFGIAK 291
N+L + ++DFG+A+
Sbjct: 130 NLLINREGELKIADFGLAR 148
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 21/166 (12%)
Query: 143 SKWFSCLELCRVTNGFSEDNLISRGGFGSIHKARIQDRM-EFSVKGFHLQCSGAFKSFDF 201
KW S + + F + G FG + + ++ +++K Q K +
Sbjct: 21 KKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH 80
Query: 202 ---ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-------------YS 245
E ++++ + L+K+ S + +V+EY+P G + L Y+
Sbjct: 81 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYA 140
Query: 246 SNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+ V EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 141 AQIV-LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA----------- 313
IH DL N+L +T + DFG+A+ + + +++++ + +MA
Sbjct: 185 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 244
Query: 314 -SYVYSFGIMLLEVFT 328
S V+S+GI L E+F+
Sbjct: 245 ESDVWSYGIFLWELFS 260
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 141 PENLLLGSAGELKIADFG 158
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 152
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 153 PENLLLGSAGELKIADFG 170
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 141 PENLLLGSAGELKIADFG 158
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA----------- 313
IH DL N+L +T + DFG+A+ + + +++++ + +MA
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 249
Query: 314 -SYVYSFGIMLLEVFT 328
S V+S+GI L E+F+
Sbjct: 250 ESDVWSYGIFLWELFS 265
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCS--GAFKSFDFECDVMKSTCYRNLIKIISSR 221
I G +G ++KA+ F++K L+ G + E ++K + N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 222 SNEDFKVLVLEYMP---RGSLEKC---LYSSNYVGFALEYLH---FDYSVLIIHYDLKPS 272
+ VLV E++ + L+ C L S F L+ L+ + + ++H DLKP
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQ 129
Query: 273 NVLFDDNIVTHLSDFGIAK 291
N+L + ++DFG+A+
Sbjct: 130 NLLINREGELKIADFGLAR 148
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 161
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 162 PENLLLGSAGELKIADFG 179
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA----------- 313
IH DL N+L +T + DFG+A+ + + +++++ + +MA
Sbjct: 167 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 226
Query: 314 -SYVYSFGIMLLEVFT 328
S V+S+GI L E+F+
Sbjct: 227 ESDVWSYGIFLWELFS 242
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 82/206 (39%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIH----KARIQDRMEFSVKGFHLQCSGAFKS---FDFECDVMKSTCYRNLIK 216
+ +G FG ++ K ++D E V + + + + F E VMK ++++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 217 IISSRSNEDFKVLVLEYMPRG----------------------SLEKCLYSSNYVGFALE 254
++ S ++++E M RG SL K + + + +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 255 YLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA- 313
YL+ + +H DL N + ++ + DFG+ + + D + L + +M+
Sbjct: 147 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 203
Query: 314 -----------SYVYSFGIMLLEVFT 328
S V+SFG++L E+ T
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 40/203 (19%)
Query: 161 DNLISRGGFGSIHKARIQ--DRMEFSV-----KGFHLQCSGAFKSFDFECDVMKSTCYRN 213
+ +I G FG + + R++ + E V KG + + + F E +M + N
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ--RREFLSEASIMGQFEHPN 76
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------------VGFALEYLHFDY 260
+I++ +N +++ E+M G+L+ L ++ + + YL
Sbjct: 77 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA--- 133
Query: 261 SVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLA-----------TI 309
+ +H DL N+L + N+V +SDFG+++ L T +L I
Sbjct: 134 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 310 GYM----ASYVYSFGIMLLEVFT 328
+ AS +S+GI++ EV +
Sbjct: 194 AFRKFTSASDAWSYGIVMWEVMS 216
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 17/98 (17%)
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNI----VTHLSDFGIAKLLIREDHFM---- 300
+G +EYLH S ++H DLKPSN+L+ D + DFG AK L E+ +
Sbjct: 130 IGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 301 -----IQTQTLATIGY-MASYVYSFGIMLLEVFTRKKP 332
+ + L GY ++S GI+L + P
Sbjct: 187 YTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 61/149 (40%), Gaps = 32/149 (21%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFE---------CDVMKSTCYRNL 214
+ RG FG +H RME GF QC A K E C + S +
Sbjct: 82 LGRGSFGEVH------RMEDKQTGF--QC--AVKKVRLEVFRAEELMACAGLTSP---RI 128
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSL------EKCLYSSN---YVGFALEYLHFDYSVLII 265
+ + + + + +E + GSL + CL Y+G ALE L + +S I+
Sbjct: 129 VPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRIL 188
Query: 266 HYDLKPSNVLF-DDNIVTHLSDFGIAKLL 293
H D+K NVL D L DFG A L
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCL 217
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT 308
A++YLH + I+H DLKP N+L+ D++ +SDFG++K+ ED + + T
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGT 181
Query: 309 IGYMASYV 316
GY+A V
Sbjct: 182 PGYVAPEV 189
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 11 GWKINHLVRQKPTHKAVTNITFGLLVFIILCPRYNYPP 48
G+ ++ QKP KAV + G++ +I+LC YPP
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLC---GYPP 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT 308
A++YLH + I+H DLKP N+L+ D++ +SDFG++K+ ED + + T
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGT 181
Query: 309 IGYMASYV 316
GY+A V
Sbjct: 182 PGYVAPEV 189
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 11 GWKINHLVRQKPTHKAVTNITFGLLVFIILCPRYNYPP 48
G+ ++ QKP KAV + G++ +I+LC YPP
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLC---GYPP 217
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 32/146 (21%)
Query: 213 NLIKII----SSRSNEDFKV-LVLEYMPRGSLEKCLYSSNYVGFALEY-----------L 256
N+++++ +SR++ + KV LV E++ + L L + G E L
Sbjct: 67 NVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 257 HFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV 316
F ++ I+H DLKP N+L L+DFG+A++ + M + T+ Y A V
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALDPVVVTLWYRAPEV 182
Query: 317 ------------YSFGIMLLEVFTRK 330
+S G + E+F RK
Sbjct: 183 LLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+P G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY P G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N++ D ++DFG+AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK 189
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 17/98 (17%)
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNI----VTHLSDFGIAKLLIREDHFM---- 300
+G +EYLH S ++H DLKPSN+L+ D + DFG AK L E+ +
Sbjct: 130 IGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 301 -----IQTQTLATIGY-MASYVYSFGIMLLEVFTRKKP 332
+ + L GY ++S GI+L + P
Sbjct: 187 YTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 61/149 (40%), Gaps = 32/149 (21%)
Query: 164 ISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFE---------CDVMKSTCYRNL 214
+ RG FG +H RME GF QC A K E C + S +
Sbjct: 101 LGRGSFGEVH------RMEDKQTGF--QC--AVKKVRLEVFRAEELMACAGLTSP---RI 147
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSL------EKCLYSSN---YVGFALEYLHFDYSVLII 265
+ + + + + +E + GSL + CL Y+G ALE L + +S I+
Sbjct: 148 VPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRIL 207
Query: 266 HYDLKPSNVLF-DDNIVTHLSDFGIAKLL 293
H D+K NVL D L DFG A L
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCL 236
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 33/205 (16%)
Query: 158 FSEDNLISRGGFGSIHKAR-IQDRMEFSVKG---FHLQCSGAFKSFDFECDVMKSTCYRN 213
F + I RG F +++A + D + ++K F L + A E D++K + N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSL---------EKCLYSSNYV-------GFALEYLH 257
+IK +S ++ +VLE G L +K L V ALE++H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 258 FDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRED---HFMIQT------QTLAT 308
S ++H D+KP+NV V L D G+ + + H ++ T + +
Sbjct: 154 ---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE 210
Query: 309 IGY-MASYVYSFGIMLLEVFTRKKP 332
GY S ++S G +L E+ + P
Sbjct: 211 NGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 30/128 (23%)
Query: 229 LVLEYMPRGSLEKCLYSSNYVGF------------ALEYLHFDYSVLIIHYDLKPSNVLF 276
+ +E+M GSL++ L + + L YL + I+H D+KPSN+L
Sbjct: 84 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILV 141
Query: 277 DDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSFGIMLL 324
+ L DFG++ LI E + + + T YM+ S ++S G+ L+
Sbjct: 142 NSRGEIKLCDFGVSGQLIDE----MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 197
Query: 325 EVFTRKKP 332
E+ + P
Sbjct: 198 EMAVGRYP 205
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT 308
A++YLH + I+H DLKP N+L+ D++ +SDFG++K+ ED + + T
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGT 181
Query: 309 IGYMASYV 316
GY+A V
Sbjct: 182 PGYVAPEV 189
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 11 GWKINHLVRQKPTHKAVTNITFGLLVFIILCPRYNYPP 48
G+ ++ QKP KAV + G++ +I+LC YPP
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLC---GYPP 217
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 24/148 (16%)
Query: 165 SRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSR--- 221
+RG FG + KA++ + +VK F +Q ++++ ++E + + N+++ I +
Sbjct: 33 ARGRFGCVWKAQLLNEY-VAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRG 90
Query: 222 SNEDFKV-LVLEYMPRGSLEKCLYS-----------SNYVGFALEYLHFDYSVL------ 263
++ D + L+ + +GSL L + + + L YLH D L
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKP 150
Query: 264 -IIHYDLKPSNVLFDDNIVTHLSDFGIA 290
I H D+K NVL +N+ ++DFG+A
Sbjct: 151 AISHRDIKSKNVLLKNNLTACIADFGLA 178
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 69/169 (40%), Gaps = 32/169 (18%)
Query: 197 KSFDFECDVMKSTC------YRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVG 250
++ D ++ K C + N++K R + + L LEY G L + +G
Sbjct: 43 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IG 100
Query: 251 F----ALEYLH-------FDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHF 299
A + H + + + I H D+KP N+L D+ +SDFG+A + +
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 300 MIQTQTLATIGYMASY-------------VYSFGIMLLEVFTRKKPTNK 335
+ + T+ Y+A V+S GI+L + + P ++
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 69/169 (40%), Gaps = 32/169 (18%)
Query: 197 KSFDFECDVMKSTC------YRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVG 250
++ D ++ K C + N++K R + + L LEY G L + +G
Sbjct: 44 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IG 101
Query: 251 F----ALEYLH-------FDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHF 299
A + H + + + I H D+KP N+L D+ +SDFG+A + +
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 300 MIQTQTLATIGYMASY-------------VYSFGIMLLEVFTRKKPTNK 335
+ + T+ Y+A V+S GI+L + + P ++
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 40/204 (19%)
Query: 164 ISRGGFGSIHKA--RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTC------YRNLI 215
+ G +G + A R+ + +VK ++ ++ D ++ K C + N++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK-----RAVDCPENIKKEICINKMLNHENVV 67
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF----ALEYLH-------FDYSVLI 264
K R + + L LEY G L + +G A + H + + + I
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASY--------- 315
H D+KP N+L D+ +SDFG+A + + + + T+ Y+A
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 316 ----VYSFGIMLLEVFTRKKPTNK 335
V+S GI+L + + P ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 40/204 (19%)
Query: 164 ISRGGFGSIHKA--RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTC------YRNLI 215
+ G +G + A R+ + +VK ++ ++ D ++ K C + N++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK-----RAVDCPENIKKEICINKMLNHENVV 67
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF----ALEYLH-------FDYSVLI 264
K R + + L LEY G L + +G A + H + + + I
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASY--------- 315
H D+KP N+L D+ +SDFG+A + + + + T+ Y+A
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 316 ----VYSFGIMLLEVFTRKKPTNK 335
V+S GI+L + + P ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 26/124 (20%)
Query: 229 LVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI------------IHYDLKPSNVLF 276
LV +Y+P GSL + + G L ++ V I +H +L NVL
Sbjct: 109 LVTQYLPLGSL--LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLL 166
Query: 277 DDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSFGIMLL 324
++DFG+A LL +D ++ ++ I +MA S V+S+G+ +
Sbjct: 167 KSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVW 226
Query: 325 EVFT 328
E+ T
Sbjct: 227 ELMT 230
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 92/239 (38%), Gaps = 59/239 (24%)
Query: 147 SCLELCRVTNGFSEDNLISRGGFGSIHKARIQD--------RMEFSVKGFHLQCSGAFKS 198
C EL RV + +GG+G + + R M+ K ++ +
Sbjct: 17 ECFELLRV---------LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAH 67
Query: 199 FDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL-------------EKCLYS 245
E ++++ + ++ +I + L+LEY+ G L C Y
Sbjct: 68 TKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYL 127
Query: 246 SNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
+ + AL +LH II+ DLKP N++ + L+DFG+ K I H T T
Sbjct: 128 AE-ISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI---HDGTVTHT 180
Query: 306 L-ATIGYMASYV------------YSFGIMLLEVFT---------RKKPTNKIFFSQRN 342
TI YMA + +S G ++ ++ T RKK +KI + N
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 42/204 (20%)
Query: 164 ISRGGFGSI---HKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS- 219
+ G +GS+ + AR++ ++ Q + E ++K + N+I ++
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 220 ---SRSNEDFKVLVLEYMPRGS----LEKC-LYSSNYVGF-------ALEYLHFDYSVLI 264
+ S EDF + L G+ + KC S +V F L+Y+H S I
Sbjct: 88 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---SAGI 144
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYVYSFGIMLL 324
IH DLKPSNV +++ + DFG+A+ + D M GY+A+ Y ++L
Sbjct: 145 IHRDLKPSNVAVNEDCELRILDFGLAR---QADEEM--------TGYVATRWYRAPEIML 193
Query: 325 EVFTRKKPTNKIFFSQRNDIKALG 348
N + ++Q DI ++G
Sbjct: 194 ---------NWMHYNQTVDIWSVG 208
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E + ++ + L+K+ S + +VLEY P G + L +S + F
Sbjct: 92 EKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK 190
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 40/204 (19%)
Query: 164 ISRGGFGSIHKA--RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTC------YRNLI 215
+ G +G + A R+ + +VK ++ ++ D ++ K C + N++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK-----RAVDCPENIKKEICINKMLNHENVV 67
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF----ALEYLH-------FDYSVLI 264
K R + + L LEY G L + +G A + H + + + I
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASY--------- 315
H D+KP N+L D+ +SDFG+A + + + + T+ Y+A
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 316 ----VYSFGIMLLEVFTRKKPTNK 335
V+S GI+L + + P ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 40/204 (19%)
Query: 164 ISRGGFGSIHKA--RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTC------YRNLI 215
+ G +G + A R+ + +VK ++ ++ D ++ K C + N++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK-----RAVDCPENIKKEICINKMLNHENVV 68
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF----ALEYLH-------FDYSVLI 264
K R + + L LEY G L + +G A + H + + + I
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASY--------- 315
H D+KP N+L D+ +SDFG+A + + + + T+ Y+A
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 316 ----VYSFGIMLLEVFTRKKPTNK 335
V+S GI+L + + P ++
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 34/199 (17%)
Query: 160 EDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGA-----FKSFDFECDVMKSTCYRNL 214
ED + G FG++ K Q + + + A E +VM+ +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYV------------GFALEYLHFDYSV 262
+++I E + +LV+E G L K L + +V ++YL
Sbjct: 75 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ES 130
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL-IREDHFMIQTQTLATIGYMA-------- 313
+H DL NVL +SDFG++K L E+++ QT + + A
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 190
Query: 314 ----SYVYSFGIMLLEVFT 328
S V+SFG+++ E F+
Sbjct: 191 FSSKSDVWSFGVLMWEAFS 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 40/204 (19%)
Query: 164 ISRGGFGSIHKA--RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTC------YRNLI 215
+ G +G + A R+ + +VK ++ ++ D ++ K C + N++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK-----RAVDCPENIKKEICINKMLNHENVV 67
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF----ALEYLH-------FDYSVLI 264
K R + + L LEY G L + +G A + H + + + I
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASY--------- 315
H D+KP N+L D+ +SDFG+A + + + + T+ Y+A
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 316 ----VYSFGIMLLEVFTRKKPTNK 335
V+S GI+L + + P ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 40/204 (19%)
Query: 164 ISRGGFGSIHKA--RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTC------YRNLI 215
+ G +G + A R+ + +VK ++ ++ D ++ K C + N++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK-----RAVDCPENIKKEICINKMLNHENVV 68
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF----ALEYLH-------FDYSVLI 264
K R + + L LEY G L + +G A + H + + + I
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASY--------- 315
H D+KP N+L D+ +SDFG+A + + + + T+ Y+A
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 316 ----VYSFGIMLLEVFTRKKPTNK 335
V+S GI+L + + P ++
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 159 SEDNLISRGGFGSIHK-ARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
S+ ++ G FG +HK ++ + K + + E VM + NLI++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 218 ISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHF----------DYSVLIIHY 267
+ +++ VLV+EY+ G L + +Y L+ + F + + I+H
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHL 211
Query: 268 DLKPSNVLFDDNIVTHLS--DFGIAK 291
DLKP N+L + + DFG+A+
Sbjct: 212 DLKPENILCVNRDAKQIKIIDFGLAR 237
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 40/204 (19%)
Query: 164 ISRGGFGSIHKA--RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTC------YRNLI 215
+ G +G + A R+ + +VK ++ ++ D ++ K C + N++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK-----RAVDCPENIKKEICINAMLNHENVV 68
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF----ALEYLH-------FDYSVLI 264
K R + + L LEY G L + +G A + H + + + I
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASY--------- 315
H D+KP N+L D+ +SDFG+A + + + + T+ Y+A
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 316 ----VYSFGIMLLEVFTRKKPTNK 335
V+S GI+L + + P ++
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 40/204 (19%)
Query: 164 ISRGGFGSIHKA--RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTC------YRNLI 215
+ G +G + A R+ + +VK ++ ++ D ++ K C + N++
Sbjct: 13 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK-----RAVDCPENIKKEICINKMLNHENVV 66
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF----ALEYLH-------FDYSVLI 264
K R + + L LEY G L + +G A + H + + + I
Sbjct: 67 KFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGI 124
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASY--------- 315
H D+KP N+L D+ +SDFG+A + + + + T+ Y+A
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184
Query: 316 ----VYSFGIMLLEVFTRKKPTNK 335
V+S GI+L + + P ++
Sbjct: 185 EPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY P G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N++ D ++DFG+AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK 189
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 40/204 (19%)
Query: 164 ISRGGFGSIHKA--RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTC------YRNLI 215
+ G +G + A R+ + +VK ++ ++ D ++ K C + N++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK-----RAVDCPENIKKEICINKMLNHENVV 68
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF----ALEYLH-------FDYSVLI 264
K R + + L LEY G L + +G A + H + + + I
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASY--------- 315
H D+KP N+L D+ +SDFG+A + + + + T+ Y+A
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 316 ----VYSFGIMLLEVFTRKKPTNK 335
V+S GI+L + + P ++
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 40/204 (19%)
Query: 164 ISRGGFGSIHKA--RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTC------YRNLI 215
+ G +G + A R+ + +VK ++ ++ D ++ K C + N++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK-----RAVDCPENIKKEICINKMLNHENVV 68
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF----ALEYLH-------FDYSVLI 264
K R + + L LEY G L + +G A + H + + + I
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASY--------- 315
H D+KP N+L D+ +SDFG+A + + + + T+ Y+A
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 316 ----VYSFGIMLLEVFTRKKPTNK 335
V+S GI+L + + P ++
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 40/204 (19%)
Query: 164 ISRGGFGSIHKA--RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTC------YRNLI 215
+ G +G + A R+ + +VK ++ ++ D ++ K C + N++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK-----RAVDCPENIKKEICINKMLNHENVV 67
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF----ALEYLH-------FDYSVLI 264
K R + + L LEY G L + +G A + H + + + I
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASY--------- 315
H D+KP N+L D+ +SDFG+A + + + + T+ Y+A
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 316 ----VYSFGIMLLEVFTRKKPTNK 335
V+S GI+L + + P ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 26/124 (20%)
Query: 229 LVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLI------------IHYDLKPSNVLF 276
LV +Y+P GSL + + G L ++ V I +H +L NVL
Sbjct: 91 LVTQYLPLGSL--LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLL 148
Query: 277 DDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSFGIMLL 324
++DFG+A LL +D ++ ++ I +MA S V+S+G+ +
Sbjct: 149 KSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVW 208
Query: 325 EVFT 328
E+ T
Sbjct: 209 ELMT 212
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 40/204 (19%)
Query: 164 ISRGGFGSIHKA--RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTC------YRNLI 215
+ G +G + A R+ + +VK ++ ++ D ++ K C + N++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK-----RAVDCPENIKKEICINKMLNHENVV 68
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF----ALEYLH-------FDYSVLI 264
K R + + L LEY G L + +G A + H + + + I
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASY--------- 315
H D+KP N+L D+ +SDFG+A + + + + T+ Y+A
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 316 ----VYSFGIMLLEVFTRKKPTNK 335
V+S GI+L + + P ++
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 34/199 (17%)
Query: 160 EDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGA-----FKSFDFECDVMKSTCYRNL 214
ED + G FG++ K Q + + + A E +VM+ +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYV------------GFALEYLHFDYSV 262
+++I E + +LV+E G L K L + +V ++YL
Sbjct: 89 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ES 144
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL-IREDHFMIQTQTLATIGYMA-------- 313
+H DL NVL +SDFG++K L E+++ QT + + A
Sbjct: 145 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 204
Query: 314 ----SYVYSFGIMLLEVFT 328
S V+SFG+++ E F+
Sbjct: 205 FSSKSDVWSFGVLMWEAFS 223
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 69/169 (40%), Gaps = 32/169 (18%)
Query: 197 KSFDFECDVMKSTC------YRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVG 250
++ D ++ K C + N++K R + + L LEY G L + +G
Sbjct: 43 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IG 100
Query: 251 F----ALEYLH-------FDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHF 299
A + H + + + I H D+KP N+L D+ +SDFG+A + +
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 300 MIQTQTLATIGYMASY-------------VYSFGIMLLEVFTRKKPTNK 335
+ + T+ Y+A V+S GI+L + + P ++
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY P G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N++ D ++DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK 189
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 40/204 (19%)
Query: 164 ISRGGFGSIHKA--RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTC------YRNLI 215
+ G +G + A R+ + +VK ++ ++ D ++ K C + N++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK-----RAVDCPENIKKEICINKMLNHENVV 67
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF----ALEYLH-------FDYSVLI 264
K R + + L LEY G L + +G A + H + + + I
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASY--------- 315
H D+KP N+L D+ +SDFG+A + + + + T+ Y+A
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 316 ----VYSFGIMLLEVFTRKKPTNK 335
V+S GI+L + + P ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 85/200 (42%), Gaps = 26/200 (13%)
Query: 158 FSEDNLISRGGFGSIHKAR-IQDRMEFSVKGFHLQC---SGAFKSFDFECDVMKSTCYRN 213
F NL+ +G F +++A I +E ++K + +G + E + + +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 214 LIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVL---------- 263
++++ + + ++ LVLE G + + L + E HF + ++
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG 132
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLI--REDHFMI---------QTQTLATIGYM 312
I+H DL SN+L N+ ++DFG+A L E H+ + + T + G +
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHG-L 191
Query: 313 ASYVYSFGIMLLEVFTRKKP 332
S V+S G M + + P
Sbjct: 192 ESDVWSLGCMFYTLLIGRPP 211
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 85/222 (38%), Gaps = 50/222 (22%)
Query: 153 RVTNGFSEDNLISRGGFGSIHKAR-IQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCY 211
R + F E ++ +G FG + KAR D +++K + E ++ S +
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNH 61
Query: 212 -------------RNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEY--- 255
RN +K ++ + + EY +L ++S N EY
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 256 -------LHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTL- 306
L + +S IIH +LKP N+ D++ + DFG+AK + R D + +Q L
Sbjct: 122 FRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 307 ----------ATIGYMASYV-------------YSFGIMLLE 325
T Y+A+ V YS GI+ E
Sbjct: 182 GSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 40/204 (19%)
Query: 164 ISRGGFGSIHKA--RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTC------YRNLI 215
+ G +G + A R+ + +VK ++ ++ D ++ K C + N++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK-----RAVDCPENIKKEICINKMLNHENVV 67
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF----ALEYLH-------FDYSVLI 264
K R + + L LEY G L + +G A + H + + + I
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASY--------- 315
H D+KP N+L D+ +SDFG+A + + + + T+ Y+A
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 316 ----VYSFGIMLLEVFTRKKPTNK 335
V+S GI+L + + P ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 27/181 (14%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMK-STCYRNLIK 216
F +++ G G+I + D + +VK +C F D E +++ S + N+I+
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIR 82
Query: 217 IISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALE-------------YLHFDYSVL 263
+ + F+ + +E + +L++ + ++ LE +LH S+
Sbjct: 83 YFCTEKDRQFQYIAIE-LCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLN 138
Query: 264 IIHYDLKPSNVLFD-----DNIVTHLSDFGIAKLLIREDH-FMIQTQTLATIGYMASYVY 317
I+H DLKP N+L I +SDFG+ K L H F ++ T G++A +
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEML 198
Query: 318 S 318
S
Sbjct: 199 S 199
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKARIQD-RMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR ++ + ++K L+ +G E ++ + N++++
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIHRDIK 135
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L ++DFG
Sbjct: 136 PENLLLGSAGELKIADFG 153
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 54/210 (25%)
Query: 164 ISRGGFGSI---HKARIQDRMEFSVKGFHLQCSGAFKSFDF------ECDVMKSTCYRNL 214
+ G +GS+ + AR+ R + +VK + S F+S E ++K + N+
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVK----KLSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 215 IKIIS----SRSNEDFKVLVLEYMPRGS----LEKC-LYSSNYVGF-------ALEYLHF 258
I ++ + S EDF + L G+ + KC S +V F L+Y+H
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH- 148
Query: 259 DYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYVYS 318
S IIH DLKPSNV +++ + DFG+A+ E GY+A+ Y
Sbjct: 149 --SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----------MTGYVATRWYR 195
Query: 319 FGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
++L N + ++Q DI ++G
Sbjct: 196 APEIML---------NWMHYNQTVDIWSVG 216
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 17/94 (18%)
Query: 253 LEYLHFDYSVLIIHYDLKPSNVLFDDNI----VTHLSDFGIAKLLIREDHFM-------- 300
+EYLH + ++H DLKPSN+L+ D + DFG AK L E+ +
Sbjct: 129 VEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTAN 185
Query: 301 -IQTQTLATIGYMAS-YVYSFGIMLLEVFTRKKP 332
+ + L GY A+ ++S G++L T P
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 34/199 (17%)
Query: 160 EDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGA-----FKSFDFECDVMKSTCYRNL 214
ED + G FG++ K Q + + + A E +VM+ +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYV------------GFALEYLHFDYSV 262
+++I E + +LV+E G L K L + +V ++YL
Sbjct: 69 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ES 124
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL-IREDHFMIQTQTLATIGYMA-------- 313
+H DL NVL +SDFG++K L E+++ QT + + A
Sbjct: 125 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 184
Query: 314 ----SYVYSFGIMLLEVFT 328
S V+SFG+++ E F+
Sbjct: 185 FSSKSDVWSFGVLMWEAFS 203
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 34/199 (17%)
Query: 160 EDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGA-----FKSFDFECDVMKSTCYRNL 214
ED + G FG++ K Q + + + A E +VM+ +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYV------------GFALEYLHFDYSV 262
+++I E + +LV+E G L K L + +V ++YL
Sbjct: 91 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ES 146
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL-IREDHFMIQTQTLATIGYMA-------- 313
+H DL NVL +SDFG++K L E+++ QT + + A
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 314 ----SYVYSFGIMLLEVFT 328
S V+SFG+++ E F+
Sbjct: 207 FSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 34/199 (17%)
Query: 160 EDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGA-----FKSFDFECDVMKSTCYRNL 214
ED + G FG++ K Q + + + A E +VM+ +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYV------------GFALEYLHFDYSV 262
+++I E + +LV+E G L K L + +V ++YL
Sbjct: 91 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ES 146
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL-IREDHFMIQTQTLATIGYMA-------- 313
+H DL NVL +SDFG++K L E+++ QT + + A
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 314 ----SYVYSFGIMLLEVFT 328
S V+SFG+++ E F+
Sbjct: 207 FSSKSDVWSFGVLMWEAFS 225
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 40/204 (19%)
Query: 164 ISRGGFGSIHKA--RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTC------YRNLI 215
+ G +G + A R+ + +VK ++ ++ D ++ K C + N++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK-----RAVDCPENIKKEICINKMLNHENVV 67
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF----ALEYLH-------FDYSVLI 264
K R + + L LEY G L + +G A + H + + + I
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASY--------- 315
H D+KP N+L D+ +SDFG+A + + + + T+ Y+A
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 316 ----VYSFGIMLLEVFTRKKPTNK 335
V+S GI+L + + P ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 34/199 (17%)
Query: 160 EDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGA-----FKSFDFECDVMKSTCYRNL 214
ED + G FG++ K Q + + + A E +VM+ +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYV------------GFALEYLHFDYSV 262
+++I E + +LV+E G L K L + +V ++YL
Sbjct: 81 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ES 136
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL-IREDHFMIQTQTLATIGYMA-------- 313
+H DL NVL +SDFG++K L E+++ QT + + A
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 196
Query: 314 ----SYVYSFGIMLLEVFT 328
S V+SFG+++ E F+
Sbjct: 197 FSSKSDVWSFGVLMWEAFS 215
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 34/199 (17%)
Query: 160 EDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGA-----FKSFDFECDVMKSTCYRNL 214
ED + G FG++ K Q + + + A E +VM+ +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYV------------GFALEYLHFDYSV 262
+++I E + +LV+E G L K L + +V ++YL
Sbjct: 71 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ES 126
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL-IREDHFMIQTQTLATIGYMA-------- 313
+H DL NVL +SDFG++K L E+++ QT + + A
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 186
Query: 314 ----SYVYSFGIMLLEVFT 328
S V+SFG+++ E F+
Sbjct: 187 FSSKSDVWSFGVLMWEAFS 205
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 32/146 (21%)
Query: 213 NLIKII----SSRSNEDFKV-LVLEYMPRGSLEKCLYSSNYVGFALEY-----------L 256
N+++++ +SR++ + KV LV E++ + L L + G E L
Sbjct: 67 NVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 257 HFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV 316
F ++ I+H DLKP N+L L+DFG+A++ + M + T+ Y A V
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALFPVVVTLWYRAPEV 182
Query: 317 ------------YSFGIMLLEVFTRK 330
+S G + E+F RK
Sbjct: 183 LLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 18/85 (21%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYVYSFGIML 323
++H DLKP+NV D L DFG+A++L ++ F + + T YM+
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA--KEFVGTPYYMSP--------- 185
Query: 324 LEVFTRKKPTNKIFFSQRNDIKALG 348
+ N++ +++++DI +LG
Sbjct: 186 -------EQMNRMSYNEKSDIWSLG 203
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF----ALEYLH 257
E + K + N++K R + + L LEY G L + +G A + H
Sbjct: 55 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFH 112
Query: 258 -------FDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIG 310
+ + + I H D+KP N+L D+ +SDFG+A + + + + T+
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 172
Query: 311 YMASY-------------VYSFGIMLLEVFTRKKPTNK 335
Y+A V+S GI+L + + P ++
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 28/174 (16%)
Query: 163 LISRGGFGSIHKARIQ-DRMEFSVKGFHLQCSGAFKSFDFECDVM-------KSTCYRNL 214
+I +G FG + AR + + + ++VK LQ K + E +M K+ + L
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKV--LQKKAILKKKE-EKHIMSERNVLLKNVKHPFL 101
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSL------EKCL------YSSNYVGFALEYLHFDYSV 262
+ + S D VL+Y+ G L E+C + + + AL YLH S+
Sbjct: 102 VGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLH---SL 158
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV 316
I++ DLKP N+L D L+DFG+ K I +H + T Y+A V
Sbjct: 159 NIVYRDLKPENILLDSQGHIVLTDFGLCKENI--EHNSTTSTFCGTPEYLAPEV 210
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 20/143 (13%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
I +G F + AR I E +VK L S K F E +MK + N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 220 SRSNEDFKVLVLEYMPRGSL------------EKCLYSSNYVGFALEYLHFDYSVLIIHY 267
E LV+EY G + ++ + A++Y H + I+H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHR 137
Query: 268 DLKPSNVLFDDNIVTHLSDFGIA 290
DLK N+L D ++ ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDD---NIVTHLSDFGIAK 291
+G A++YLH S+ I H D+KP N+L+ N + L+DFG AK
Sbjct: 176 IGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 218
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDD---NIVTHLSDFGIAK 291
+G A++YLH S+ I H D+KP N+L+ N + L+DFG AK
Sbjct: 170 IGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF----ALEYLH 257
E + K + N++K R + + L LEY G L + +G A + H
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFH 111
Query: 258 -------FDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIG 310
+ + + I H D+KP N+L D+ +SDFG+A + + + + T+
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 311 YMASY-------------VYSFGIMLLEVFTRKKPTNK 335
Y+A V+S GI+L + + P ++
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 15/147 (10%)
Query: 156 NGFSEDNLISRGGFGSIHKARIQDRMEFSVK-----GFHLQCSGAFKSFDFECDVMKSTC 210
+ F + +G FG+++ AR + + F V ++ G E ++
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAR-EKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 211 YRNLIKIISSRSNEDFKVLVLEYMPRGSLEK-----CLYSSNYVGFALEYLH----FDYS 261
+ N++++ + + L+LEY PRG L K C + +E L + +
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHG 141
Query: 262 VLIIHYDLKPSNVLFDDNIVTHLSDFG 288
+IH D+KP N+L ++DFG
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFG 168
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDD---NIVTHLSDFGIAK 291
+G A++YLH S+ I H D+KP N+L+ N + L+DFG AK
Sbjct: 140 IGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 182
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 23/107 (21%)
Query: 241 KCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFM 300
+ ++ + + LE+LH II+ DLKP NVL DD+ +SD G+A L
Sbjct: 290 RAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK-----A 341
Query: 301 IQTQT---LATIGYMASYV------------YSFGIMLLEVFTRKKP 332
QT+T T G+MA + ++ G+ L E+ + P
Sbjct: 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 24/105 (22%)
Query: 243 LYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQ 302
Y++ V LE+LH II+ DLKP NVL DD+ +SD G+A L Q
Sbjct: 293 FYTAQIVS-GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK-----AGQ 343
Query: 303 TQT---LATIGYMASYV------------YSFGIMLLEVFTRKKP 332
T+T T G+MA + ++ G+ L E+ + P
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 23/107 (21%)
Query: 241 KCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFM 300
+ ++ + + LE+LH II+ DLKP NVL DD+ +SD G+A L
Sbjct: 290 RAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK-----A 341
Query: 301 IQTQT---LATIGYMASYV------------YSFGIMLLEVFTRKKP 332
QT+T T G+MA + ++ G+ L E+ + P
Sbjct: 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY P G + L +S + F
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N++ D ++DFG AK
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 23/107 (21%)
Query: 241 KCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFM 300
+ ++ + + LE+LH II+ DLKP NVL DD+ +SD G+A L
Sbjct: 290 RAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK-----A 341
Query: 301 IQTQT---LATIGYMASYV------------YSFGIMLLEVFTRKKP 332
QT+T T G+MA + ++ G+ L E+ + P
Sbjct: 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDD---NIVTHLSDFGIAK 291
+G A++YLH S+ I H D+KP N+L+ N + L+DFG AK
Sbjct: 126 IGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 164 ISRGGFGSIHKARIQDRMEF-SVKGFHLQCS--GAFKSFDFECDVMKSTCYRNLIKIISS 220
I G +G++ KA+ ++ E ++K L G S E ++K ++N++++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 221 RSNEDFKVLVLEYMPRGSLEKCLYSSN----------YVGFALEYLHFDYSVLIIHYDLK 270
++ LV E+ + L+K S N ++ L+ L F +S ++H DLK
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLK 128
Query: 271 PSNVLFDDNIVTHLSDFGIAK 291
P N+L + N L+DFG+A+
Sbjct: 129 PQNLLINRNGELKLADFGLAR 149
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDD---NIVTHLSDFGIAK 291
+G A++YLH S+ I H D+KP N+L+ N + L+DFG AK
Sbjct: 170 IGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L +++FG
Sbjct: 139 PENLLLGSAGELKIANFG 156
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDD---NIVTHLSDFGIAK 291
+G A++YLH S+ I H D+KP N+L+ N + L+DFG AK
Sbjct: 130 IGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 172
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY P G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N++ D ++DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 189
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDD---NIVTHLSDFGIAK 291
+G A++YLH S+ I H D+KP N+L+ N + L+DFG AK
Sbjct: 131 IGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 173
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 20/143 (13%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
I +G F + AR I E +VK L S K F E +MK + N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 220 SRSNEDFKVLVLEYMPRGSL------------EKCLYSSNYVGFALEYLHFDYSVLIIHY 267
E LV+EY G + ++ + A++Y H + I+H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHR 137
Query: 268 DLKPSNVLFDDNIVTHLSDFGIA 290
DLK N+L D ++ ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 20/143 (13%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
I +G F + AR I E +VK L S K F E +MK + N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 220 SRSNEDFKVLVLEYMPRGSL------------EKCLYSSNYVGFALEYLHFDYSVLIIHY 267
E LV+EY G + ++ + A++Y H + I+H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHR 137
Query: 268 DLKPSNVLFDDNIVTHLSDFGIA 290
DLK N+L D ++ ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDD---NIVTHLSDFGIAK 291
+G A++YLH S+ I H D+KP N+L+ N + L+DFG AK
Sbjct: 126 IGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDD---NIVTHLSDFGIAK 291
+G A++YLH S+ I H D+KP N+L+ N + L+DFG AK
Sbjct: 124 IGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 166
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDD---NIVTHLSDFGIAK 291
+G A++YLH S+ I H D+KP N+L+ N + L+DFG AK
Sbjct: 132 IGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 174
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDD---NIVTHLSDFGIAK 291
+G A++YLH S+ I H D+KP N+L+ N + L+DFG AK
Sbjct: 125 IGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 167
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-------------YSSNY 248
E ++++ + L+K+ S + +V+EY P G + L Y++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
V EYLH S+ +I+ DLKP N++ D ++DFG AK
Sbjct: 151 V-LTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 189
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 91/238 (38%), Gaps = 57/238 (23%)
Query: 147 SCLELCRVTNGFSEDNLISRGGFGSIHKARIQD--------RMEFSVKGFHLQCSGAFKS 198
C EL RV + +GG+G + + R M+ K ++ +
Sbjct: 17 ECFELLRV---------LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAH 67
Query: 199 FDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL-------------EKCLYS 245
E ++++ + ++ +I + L+LEY+ G L C Y
Sbjct: 68 TKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYL 127
Query: 246 SNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
+ + AL +LH II+ DLKP N++ + L+DFG+ K I + +
Sbjct: 128 AE-ISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG--TVTHXF 181
Query: 306 LATIGYMASYV------------YSFGIMLLEVFT---------RKKPTNKIFFSQRN 342
TI YMA + +S G ++ ++ T RKK +KI + N
Sbjct: 182 CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 37/163 (22%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------- 248
+ F E +M + N+I + + +++ E+M GSL+ L ++
Sbjct: 53 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLV 112
Query: 249 -----VGFALEYL-HFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQ 302
+ ++YL +Y +H L N+L + N+V +SDFG+++ L ED
Sbjct: 113 GMLRGIAAGMKYLADMNY----VHRALAARNILVNSNLVCKVSDFGLSRFL--EDDTSDP 166
Query: 303 TQTLATIGYM-----------------ASYVYSFGIMLLEVFT 328
T T A G + AS V+S+GI++ EV +
Sbjct: 167 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF----ALEYLH 257
E + K + N++K R + + L LEY G L + +G A + H
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFH 111
Query: 258 -------FDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIG 310
+ + + I H D+KP N+L D+ +SDFG+A + + + + T+
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 311 YMASY-------------VYSFGIMLLEVFTRKKPTNK 335
Y+A V+S GI+L + + P ++
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDD---NIVTHLSDFGIAK 291
+G A++YLH S+ I H D+KP N+L+ N + L+DFG AK
Sbjct: 126 IGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDD---NIVTHLSDFGIAK 291
+G A++YLH S+ I H D+KP N+L+ N + L+DFG AK
Sbjct: 124 IGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 166
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH T+ +AT
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 158 FSEDNLISRGGFGSIHKAR-IQDRMEFSVKGFHL---QCSGAFKSFDFECDVMKSTCYRN 213
FS+ I G FG+++ AR +++ ++K Q + ++ E ++ + N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 214 LIKIISSRSNEDFKVLVLEY----------MPRGSLEKCLYSSNYVGFALEYLHFDYSVL 263
I+ E LV+EY + + L++ ++ G AL+ L + +S
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHG-ALQGLAYLHSHN 174
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA----SY---- 315
+IH D+K N+L + + L DFG A ++ + F+ +A +A Y
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKV 234
Query: 316 -VYSFGIMLLEVFTRKKP 332
V+S GI +E+ RK P
Sbjct: 235 DVWSLGITCIELAERKPP 252
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 56/130 (43%), Gaps = 30/130 (23%)
Query: 229 LVLEYMPRGSLEKCLYSSN---------YVG---FALEYLHFDYSVLIIHYDLKPSNVLF 276
L+L+Y+ G L L YVG ALE+LH + II+ D+K N+L
Sbjct: 136 LILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILL 192
Query: 277 DDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV--------------YSFGIM 322
D N L+DFG++K + D TI YMA + +S G++
Sbjct: 193 DSNGHVVLTDFGLSKEFV-ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVL 251
Query: 323 LLEVFTRKKP 332
+ E+ T P
Sbjct: 252 MYELLTGASP 261
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 78/199 (39%), Gaps = 34/199 (17%)
Query: 160 EDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGA-----FKSFDFECDVMKSTCYRNL 214
ED + G FG++ K Q + + + A E +VM+ +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYV------------GFALEYLHFDYSV 262
+++I E + +LV+E G L K L + +V ++YL
Sbjct: 75 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ES 130
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL-IREDHFMIQTQTLATIGYMA-------- 313
+H DL NVL +SDFG++K L E+ + QT + + A
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYK 190
Query: 314 ----SYVYSFGIMLLEVFT 328
S V+SFG+++ E F+
Sbjct: 191 FSSKSDVWSFGVLMWEAFS 209
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
+ +G FG+++ AR Q + ++K L+ +G E ++ + N++++
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
+ L+LEY P G++ + L ++ Y+ L + +S +IH D+K
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 137
Query: 271 PSNVLFDDNIVTHLSDFG 288
P N+L +++FG
Sbjct: 138 PENLLLGSAGELKIANFG 155
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH T+ +AT
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH T+ +AT
Sbjct: 141 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH T+ +AT
Sbjct: 142 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH T+ +AT
Sbjct: 133 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 253 LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYM 312
LE +H + I+H DLKP+N L D ++ L DFGIA + + +++ + T+ YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH T+ +AT
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 158 FSEDNLISRGGFGSIHKAR-IQDRMEFSVKGFHL---QCSGAFKSFDFECDVMKSTCYRN 213
FS+ I G FG+++ AR +++ ++K Q + ++ E ++ + N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 214 LIKIISSRSNEDFKVLVLEY----------MPRGSLEKCLYSSNYVGFALEYLHFDYSVL 263
I+ E LV+EY + + L++ ++ G AL+ L + +S
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHG-ALQGLAYLHSHN 135
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA----SY---- 315
+IH D+K N+L + + L DFG A ++ + F+ +A +A Y
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKV 195
Query: 316 -VYSFGIMLLEVFTRKKP 332
V+S GI +E+ RK P
Sbjct: 196 DVWSLGITCIELAERKPP 213
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH T+ +AT
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH T+ +AT
Sbjct: 144 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH T+ +AT
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH T+ +AT
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH T+ +AT
Sbjct: 134 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH T+ +AT
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------EKCLYSSNYVG 250
+ + E ++++ + N+I + N+ VL+LE + G L ++ L
Sbjct: 53 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 112
Query: 251 F---ALEYLHFDYSVLIIHYDLKPSNV-LFDDNIVT---HLSDFGIA 290
F L+ +H+ +S I H+DLKP N+ L D N+ L DFGIA
Sbjct: 113 FLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 253 LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYM 312
LE +H + I+H DLKP+N L D ++ L DFGIA + + +++ + T+ YM
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH T+ +AT
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH T+ +AT
Sbjct: 134 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH T+ +AT
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH T+ +AT
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 54/210 (25%)
Query: 164 ISRGGFGSI---HKARIQDRMEFSVKGFHLQCSGAFKSFDF------ECDVMKSTCYRNL 214
+ G +GS+ + AR+ R + +VK + S F+S E ++K + N+
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVK----KLSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 215 IKIIS----SRSNEDFKVLVLEYMPRGS-----LEKCLYSSNYVGF-------ALEYLHF 258
I ++ + S EDF + L G+ ++ S +V F L+Y+H
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH- 148
Query: 259 DYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYVYS 318
S IIH DLKPSNV +++ + DFG+A+ E GY+A+ Y
Sbjct: 149 --SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----------MTGYVATRWYR 195
Query: 319 FGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
++L N + ++Q DI ++G
Sbjct: 196 APEIML---------NWMHYNQTVDIWSVG 216
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 30/128 (23%)
Query: 229 LVLEYMPRGSLEKCLYSSNYVG------------FALEYLHFDYSVLIIHYDLKPSNVLF 276
+ +E+M GSL++ L + + L YL + I+H D+KPSN+L
Sbjct: 91 ICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILV 148
Query: 277 DDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA------------SYVYSFGIMLL 324
+ L DFG++ LI + + T YMA S ++S G+ L+
Sbjct: 149 NSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLV 204
Query: 325 EVFTRKKP 332
E+ + P
Sbjct: 205 ELAVGRYP 212
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 253 LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYM 312
LE +H + I+H DLKP+N L D ++ L DFGIA + + +++ + T+ YM
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDXXXVVKDSQVGTVNYM 195
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH T+ +AT
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------EKCLYSSNYVG 250
+ + E ++++ + N+I + N+ VL+LE + G L ++ L
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 133
Query: 251 F---ALEYLHFDYSVLIIHYDLKPSNV-LFDDNIVT---HLSDFGIA 290
F L+ +H+ +S I H+DLKP N+ L D N+ L DFGIA
Sbjct: 134 FLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------EKCLYSSNYVG 250
+ + E ++++ + N+I + N+ VL+LE + G L ++ L
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 119
Query: 251 F---ALEYLHFDYSVLIIHYDLKPSNV-LFDDNIVT---HLSDFGIA 290
F L+ +H+ +S I H+DLKP N+ L D N+ L DFGIA
Sbjct: 120 FLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH T+ +AT
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH T+ +AT
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 39/164 (23%)
Query: 188 FHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSN 247
F++Q +F++F+ E +++ +L ++IS++ D + Y ++ K L+ SN
Sbjct: 75 FNIQRPDSFENFN-EVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV-KVLHGSN 132
Query: 248 YVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQ----- 302
+IH DLKPSN+L + N + DFG+A+++ +
Sbjct: 133 ----------------VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 303 ---TQTLATIGYMASY-------------VYSFGIMLLEVFTRK 330
T+ +AT Y A V+S G +L E+F R+
Sbjct: 177 SGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 253 LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYM 312
LE +H + I+H DLKP+N L D ++ L DFGIA + + +++ + T+ YM
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 253 LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYM 312
LE +H + I+H DLKP+N L D ++ L DFGIA + + +++ + T+ YM
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 253 LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYM 312
LE +H + I+H DLKP+N L D ++ L DFGIA + + +++ + T+ YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH T+ +AT
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 21/91 (23%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGY 311
ALE+LH SV IH D+KPSNVL + + DFGI+ L+ + +T Y
Sbjct: 165 ALEHLHSKLSV--IHRDVKPSNVLINALGQVKMCDFGISGYLVDS---VAKTIDAGCKPY 219
Query: 312 MA----------------SYVYSFGIMLLEV 326
MA S ++S GI ++E+
Sbjct: 220 MAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+ G + L +S + F
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 137
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D+ ++DFG AK
Sbjct: 138 VLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK 176
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH T+ +AT
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 167 GGFGSIHKARIQDR-MEFSVKGFHLQCSGAFK------SFDFECDVMKSTCYRNLIKIIS 219
G F + K R + +E++ K + S A + + E +++ + N+I +
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
N VL+LE + G L L +++++ L+ +++ ++ I H+DLK
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLK 142
Query: 271 PSNV-LFDDNI-VTHLS--DFGIA 290
P N+ L D NI + H+ DFG+A
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 167 GGFGSIHKARIQDR-MEFSVKGFHLQCSGAFK------SFDFECDVMKSTCYRNLIKIIS 219
G F + K R + +E++ K + S A + + E +++ + N+I +
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
N VL+LE + G L L +++++ L+ +++ ++ I H+DLK
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLK 142
Query: 271 PSNV-LFDDNI-VTHLS--DFGIA 290
P N+ L D NI + H+ DFG+A
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 167 GGFGSIHKARIQDR-MEFSVKGFHLQCSGAFK------SFDFECDVMKSTCYRNLIKIIS 219
G F + K R + +E++ K + S A + + E +++ + N+I +
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
N VL+LE + G L L +++++ L+ +++ ++ I H+DLK
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLK 142
Query: 271 PSNV-LFDDNI-VTHLS--DFGIA 290
P N+ L D NI + H+ DFG+A
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 167 GGFGSIHKARIQDR-MEFSVKGFHLQCSGAFK------SFDFECDVMKSTCYRNLIKIIS 219
G F + K R + +E++ K + S A + + E +++ + N+I +
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
N VL+LE + G L L +++++ L+ +++ ++ I H+DLK
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLK 142
Query: 271 PSNV-LFDDNI-VTHLS--DFGIA 290
P N+ L D NI + H+ DFG+A
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 20/143 (13%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
I +G F + AR + E +VK L + K F E +MK + N++K+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 81
Query: 220 SRSNEDFKVLVLEYMPRGSL------------EKCLYSSNYVGFALEYLHFDYSVLIIHY 267
E LV+EY G + ++ + A++Y H Y I+H
Sbjct: 82 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKY---IVHR 138
Query: 268 DLKPSNVLFDDNIVTHLSDFGIA 290
DLK N+L D ++ ++DFG +
Sbjct: 139 DLKAENLLLDGDMNIKIADFGFS 161
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 253 LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYM 312
LE +H + I+H DLKP+N L D ++ L DFGIA + + +++ + T+ YM
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 20/143 (13%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
I +G F + AR I E +V+ L S K F E +MK + N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 220 SRSNEDFKVLVLEYMPRGSL------------EKCLYSSNYVGFALEYLHFDYSVLIIHY 267
E LV+EY G + ++ + A++Y H + I+H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHR 137
Query: 268 DLKPSNVLFDDNIVTHLSDFGIA 290
DLK N+L D ++ ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 44/204 (21%)
Query: 164 ISRGGFGSIHKARIQD----RMEFSVKGFHLQCSGAFKS---FDFECDVMKSTCYRNLIK 216
+ +G FG +++ +D E V + S + + F E VMK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 217 IISSRSNEDFKVLVLEYMPRGSLEKCLYS----------------------SNYVGFALE 254
++ S ++V+E M G L+ L S + + +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 255 YLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA- 313
YL+ + +H DL N + + + DFG+ + + D++ + L + +MA
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 314 -----------SYVYSFGIMLLEV 326
S ++SFG++L E+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 164 ISRGGFGSIHKARIQDRM---EFSVKGFHLQCSGAFKSFDF-ECDVMKSTCYRNLIKIIS 219
+ RG FG +H R++D+ + +VK L+ F+ + C + S ++ +
Sbjct: 82 VGRGSFGEVH--RMKDKQTGFQCAVKKVRLE---VFRVEELVACAGLSSP---RIVPLYG 133
Query: 220 SRSNEDFKVLVLEYMPRGSLEK------CLYSSN---YVGFALEYLHFDYSVLIIHYDLK 270
+ + + +E + GSL + CL Y+G ALE L + ++ I+H D+K
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 193
Query: 271 PSNVLF-DDNIVTHLSDFGIA 290
NVL D L DFG A
Sbjct: 194 ADNVLLSSDGSRAALCDFGHA 214
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 39/164 (23%)
Query: 188 FHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSN 247
F++Q +F++F+ E +++ +L ++IS++ D + Y ++ K L+ SN
Sbjct: 75 FNIQRPDSFENFN-EVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV-KVLHGSN 132
Query: 248 YVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE--DHFMIQTQT 305
+IH DLKPSN+L + N + DFG+A+++ D+ Q
Sbjct: 133 ----------------VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 306 LATIGYMASY-------------------VYSFGIMLLEVFTRK 330
Y+A+ V+S G +L E+F R+
Sbjct: 177 SGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 20/143 (13%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
I +G F + AR I E +V+ L S K F E +MK + N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 220 SRSNEDFKVLVLEYMPRGSL------------EKCLYSSNYVGFALEYLHFDYSVLIIHY 267
E LV+EY G + ++ + A++Y H + I+H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHR 137
Query: 268 DLKPSNVLFDDNIVTHLSDFGIA 290
DLK N+L D ++ ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 15/75 (20%)
Query: 229 LVLEYMPRGSLEKCL-----YSSNYVGF-------ALEYLHFDYSVLIIHYDLKPSNVLF 276
+V+EY P G + L +S + F EYLH S+ +I+ DLKP N++
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMI 175
Query: 277 DDNIVTHLSDFGIAK 291
D ++DFG AK
Sbjct: 176 DQQGYIKVTDFGFAK 190
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 15/75 (20%)
Query: 229 LVLEYMPRGSLEKCL-----YSSNYVGF-------ALEYLHFDYSVLIIHYDLKPSNVLF 276
+V+EY P G + L +S + F EYLH S+ +I+ DLKP N++
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMI 175
Query: 277 DDNIVTHLSDFGIAK 291
D ++DFG AK
Sbjct: 176 DQQGYIKVTDFGFAK 190
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 18/139 (12%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVKGFHLQCSGAFKSFDF-ECDVMKSTCYRNLIKIISSR 221
+ RG FG +H+ + Q + +VK L+ F+ + C + S ++ + +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLE---VFRVEELVACAGLSSP---RIVPLYGAV 119
Query: 222 SNEDFKVLVLEYMPRGSLEK------CLYSSN---YVGFALEYLHFDYSVLIIHYDLKPS 272
+ + +E + GSL + CL Y+G ALE L + ++ I+H D+K
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKAD 179
Query: 273 NVLF-DDNIVTHLSDFGIA 290
NVL D L DFG A
Sbjct: 180 NVLLSSDGSRAALCDFGHA 198
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 22/124 (17%)
Query: 229 LVLEYMPRGSLEKCLYSSNYVGF------------ALEYLHFDYSVLIIHYDLKPSNVLF 276
+ +E+M GSL++ L + + L YL + I+H D+KPSN+L
Sbjct: 143 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILV 200
Query: 277 DDNIVTHLSDFGIAKLLIRE--------DHFMIQTQTLATIGYMASYVYSFGIMLLEVFT 328
+ L DFG++ LI +M + T + S ++S G+ L+E+
Sbjct: 201 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 260
Query: 329 RKKP 332
+ P
Sbjct: 261 GRYP 264
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 167 GGFGSIHKARIQDR-MEFSVKGFHLQCSGAFK------SFDFECDVMKSTCYRNLIKIIS 219
G F + K R + +E++ K + S A + + E +++ + N+I +
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
N VL+LE + G L L +++++ L+ +++ ++ I H+DLK
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLK 142
Query: 271 PSNV-LFDDNI-VTHLS--DFGIA 290
P N+ L D NI + H+ DFG+A
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 18/106 (16%)
Query: 188 FHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSN 247
F++Q +F++F+ E +++ +L ++IS++ D + Y ++ K L+ SN
Sbjct: 75 FNIQRPDSFENFN-EVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV-KVLHGSN 132
Query: 248 YVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL 293
+IH DLKPSN+L + N + DFG+A+++
Sbjct: 133 ----------------VIHRDLKPSNLLINSNCDLKVCDFGLARII 162
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 17/76 (22%)
Query: 229 LVLEYMPRGSLEKCL-------------YSSNYVGFALEYLHFDYSVLIIHYDLKPSNVL 275
+V+EY P G + L Y++ V EYLH S+ +I+ DLKP N++
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIV-LTFEYLH---SLDLIYRDLKPENLM 174
Query: 276 FDDNIVTHLSDFGIAK 291
D ++DFG AK
Sbjct: 175 IDQQGYIKVTDFGFAK 190
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 204 DVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVL 263
DV+KS +I +I NE F +V + S ++ + A+EY H
Sbjct: 80 DVIKSK--DEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHK--- 132
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLL 293
I+H DLKP N+L D+++ ++DFG++ ++
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIM 162
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 204 DVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVL 263
DV+KS +I +I NE F +V + S ++ + A+EY H
Sbjct: 81 DVIKSK--DEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHK--- 133
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLL 293
I+H DLKP N+L D+++ ++DFG++ ++
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIM 163
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 44/204 (21%)
Query: 164 ISRGGFGSIHKARIQD----RMEFSVKGFHLQCSGAFKS---FDFECDVMKSTCYRNLIK 216
+ +G FG +++ +D E V + S + + F E VMK ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 217 IISSRSNEDFKVLVLEYMPRGSLEKCLYS----------------------SNYVGFALE 254
++ S ++V+E M G L+ L S + + +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 255 YLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA- 313
YL+ + +H DL N + + + DFG+ + + D++ + L + +MA
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 314 -----------SYVYSFGIMLLEV 326
S ++SFG++L E+
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 204 DVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVL 263
DV+KS +I +I NE F +V + S ++ + A+EY H
Sbjct: 71 DVIKSK--DEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHK--- 123
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLL 293
I+H DLKP N+L D+++ ++DFG++ ++
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIM 153
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 204 DVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVL 263
DV+KS +I +I NE F +V + S ++ + A+EY H
Sbjct: 75 DVIKSK--DEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHK--- 127
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLL 293
I+H DLKP N+L D+++ ++DFG++ ++
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIM 157
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 85/207 (41%), Gaps = 29/207 (14%)
Query: 145 WFSCLELC-RVTNGFSEDNLISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGA--FKSFD 200
+F + C R T+ + + +G F + + + E++ K + + A + +
Sbjct: 19 YFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLE 78
Query: 201 FECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFA-------- 252
E + + + N++++ S S E F LV + + G L + + + Y A
Sbjct: 79 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQ 138
Query: 253 -LEYLHFDYSVLIIHYDLKPSNVLFDDN---IVTHLSDFGIAKLLIREDHFMIQTQTLAT 308
LE ++ + I+H DLKP N+L L+DFG+A +Q + A
Sbjct: 139 ILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA--------IEVQGEQQAW 190
Query: 309 IGYMASYVYSFGIMLLEVFTRKKPTNK 335
G+ + G + EV RK P K
Sbjct: 191 FGFAGTP----GYLSPEVL-RKDPYGK 212
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 167 GGFGSIHKARIQDR-MEFSVKGFHLQCSGAFK------SFDFECDVMKSTCYRNLIKIIS 219
G F + K R + +E++ K + S A + + E +++ + N+I +
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHD 82
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLY---------SSNYVGFALEYLHFDYSVLIIHYDLK 270
N VL+LE + G L L +++++ L+ +++ ++ I H+DLK
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLK 142
Query: 271 PSNV-LFDDNI-VTHLS--DFGIA 290
P N+ L D NI + H+ DFG+A
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 22/124 (17%)
Query: 229 LVLEYMPRGSLEKCLYSSNYVGF------------ALEYLHFDYSVLIIHYDLKPSNVLF 276
+ +E+M GSL++ L + + L YL + I+H D+KPSN+L
Sbjct: 108 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILV 165
Query: 277 DDNIVTHLSDFGIAKLLIRE--------DHFMIQTQTLATIGYMASYVYSFGIMLLEVFT 328
+ L DFG++ LI +M + T + S ++S G+ L+E+
Sbjct: 166 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 225
Query: 329 RKKP 332
+ P
Sbjct: 226 GRYP 229
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 19/109 (17%)
Query: 200 DFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------------EKCLYSSN 247
+ E +++K + +IKI + ED+ +VLE M G L C
Sbjct: 69 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 248 YVGFALEYLHFDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLL 293
+ A++YLH + IIH DLKP NVL +++ + ++DFG +K+L
Sbjct: 128 QMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 173
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 19/109 (17%)
Query: 200 DFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------------EKCLYSSN 247
+ E +++K + +IKI + ED+ +VLE M G L C
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 248 YVGFALEYLHFDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLL 293
+ A++YLH + IIH DLKP NVL +++ + ++DFG +K+L
Sbjct: 122 QMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 19/109 (17%)
Query: 200 DFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------------EKCLYSSN 247
+ E +++K + +IKI + ED+ +VLE M G L C
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 248 YVGFALEYLHFDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLL 293
+ A++YLH + IIH DLKP NVL +++ + ++DFG +K+L
Sbjct: 122 QMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 19/109 (17%)
Query: 200 DFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------------EKCLYSSN 247
+ E +++K + +IKI + ED+ +VLE M G L C
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 248 YVGFALEYLHFDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLL 293
+ A++YLH + IIH DLKP NVL +++ + ++DFG +K+L
Sbjct: 121 QMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 166
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 19/109 (17%)
Query: 200 DFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------------EKCLYSSN 247
+ E +++K + +IKI + ED+ +VLE M G L C
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 248 YVGFALEYLHFDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLL 293
+ A++YLH + IIH DLKP NVL +++ + ++DFG +K+L
Sbjct: 122 QMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+ G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-------------YSSNY 248
E ++++ + L+K+ S + +V+EY+ G + L Y++
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 171
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
V EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 172 V-LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+ G + L +S + F
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 171
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 172 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+ G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+ G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+ G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+ G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 22/124 (17%)
Query: 229 LVLEYMPRGSLEKCLYSSNYVGF------------ALEYLHFDYSVLIIHYDLKPSNVLF 276
+ +E+M GSL++ L + + L YL + I+H D+KPSN+L
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILV 138
Query: 277 DDNIVTHLSDFGIAKLLIRE--------DHFMIQTQTLATIGYMASYVYSFGIMLLEVFT 328
+ L DFG++ LI +M + T + S ++S G+ L+E+
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 329 RKKP 332
+ P
Sbjct: 199 GRYP 202
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+ G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+ G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+ G + L +S + F
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-------------YSSNY 248
E ++++ + L+K+ S + +V+EY+ G + L Y++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
V EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 V-LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+ G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-------------YSSNY 248
E ++++ + L+K+ S + +V+EY+ G + L Y++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQI 150
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
V EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 V-LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 22/124 (17%)
Query: 229 LVLEYMPRGSLEKCLYSSNYVGF------------ALEYLHFDYSVLIIHYDLKPSNVLF 276
+ +E+M GSL++ L + + L YL + I+H D+KPSN+L
Sbjct: 100 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILV 157
Query: 277 DDNIVTHLSDFGIAKLLIRE--------DHFMIQTQTLATIGYMASYVYSFGIMLLEVFT 328
+ L DFG++ LI +M + T + S ++S G+ L+E+
Sbjct: 158 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 217
Query: 329 RKKP 332
+ P
Sbjct: 218 GRYP 221
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-------------YSSNY 248
E ++++ + L+K+ S + +V+EY+ G + L Y++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
V EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 V-LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 18/139 (12%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVKGFHLQCSGAFKSFDF-ECDVMKSTCYRNLIKIISSR 221
+ RG FG +H+ + Q + +VK L+ F+ + C + S ++ + +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLE---VFRVEELVACAGLSSP---RIVPLYGAV 133
Query: 222 SNEDFKVLVLEYMPRGSLEK------CLYSSN---YVGFALEYLHFDYSVLIIHYDLKPS 272
+ + +E + GSL + CL Y+G ALE L + ++ I+H D+K
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKAD 193
Query: 273 NVLF-DDNIVTHLSDFGIA 290
NVL D L DFG A
Sbjct: 194 NVLLSSDGSRAALCDFGHA 212
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+ G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%)
Query: 55 ENLSLASNELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAG 114
E L+LA NE+ + + FW L +L LNLS N L ENL L + S N+
Sbjct: 302 EQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRA 361
Query: 115 VIPNAIGCLNILQHLFLGYNRLQ 137
+ + L L+ L L N+L+
Sbjct: 362 LGDQSFLGLPNLKELALDTNQLK 384
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 15/88 (17%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE---------DHFMIQ 302
ALE+LH SV IH D+KPSNVL + + DFGI+ L+ + +M
Sbjct: 121 ALEHLHSKLSV--IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAP 178
Query: 303 TQ---TLATIGY-MASYVYSFGIMLLEV 326
+ L GY + S ++S GI ++E+
Sbjct: 179 ERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+ G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+ G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL-----EKCLYS----SNYVGFA 252
E V+ + N+IK+ LVLE + G L EK YS ++ V
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI 157
Query: 253 LEYLHFDYSVLIIHYDLKPSNVLFDD---NIVTHLSDFGIAKLLIREDHFMIQTQTLATI 309
LE + + + I+H DLKP N+L+ + ++DFG++K++ +H ++ T
Sbjct: 158 LEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTP 214
Query: 310 GYMA 313
GY A
Sbjct: 215 GYCA 218
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 40/176 (22%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSS-----------NYVG 250
E +MK + N++++ E+ LV E+M L+K + S N V
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVK 111
Query: 251 F----ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK--------------- 291
+ L+ L F + I+H DLKP N+L + L DFG+A+
Sbjct: 112 YFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVT 171
Query: 292 LLIREDHFMIQTQTLATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKAL 347
L R ++ ++T +T + ++S G +L E+ T K F ND + L
Sbjct: 172 LWYRAPDVLMGSRTYST----SIDIWSCGCILAEMI-----TGKPLFPGTNDEEQL 218
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 181 MEFSVKGFHLQCSGA--FKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGS 238
+EF+ K + + A F+ + E + + + N++++ S E F LV + + G
Sbjct: 55 LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE 114
Query: 239 LEKCLYSSNYVGFA---------LEYLHFDYSVLIIHYDLKPSNVLFDD---NIVTHLSD 286
L + + + + A LE + + +S I+H +LKP N+L L+D
Sbjct: 115 LFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLAD 174
Query: 287 FGIA 290
FG+A
Sbjct: 175 FGLA 178
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH + +AT
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-------------YSSNY 248
E ++++ + L+K+ S + +V+EY+ G + L Y++
Sbjct: 86 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 145
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
V EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 146 V-LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 184
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-DHFMIQTQTLATIG 310
L+Y+H S ++H DLKPSN+L + + DFG+A++ + DH + +AT
Sbjct: 141 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 311 YMASY-------------VYSFGIMLLEVFTRK 330
Y A ++S G +L E+ + +
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 22/124 (17%)
Query: 229 LVLEYMPRGSLEKCLYSSNYVGF------------ALEYLHFDYSVLIIHYDLKPSNVLF 276
+ +E+M GSL++ L + + L YL + I+H D+KPSN+L
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILV 138
Query: 277 DDNIVTHLSDFGIAKLLIRE--------DHFMIQTQTLATIGYMASYVYSFGIMLLEVFT 328
+ L DFG++ LI +M + T + S ++S G+ L+E+
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 329 RKKP 332
+ P
Sbjct: 199 GRYP 202
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-------------YSSNY 248
E ++++ + L+K+ S + +V+EY+ G + L Y++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
V EYLH S+ +I+ DLKP N+L D ++DFG AK
Sbjct: 151 V-LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 17/131 (12%)
Query: 176 RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMP 235
RI + +F++ G + A + + E +++K + +IKI + ED+ +VLE M
Sbjct: 166 RIISKRKFAI-GSAREADPAL-NVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELME 222
Query: 236 RGSLEKCLYSSNYVGFALEYLHFDYSVL----------IIHYDLKPSNVLF---DDNIVT 282
G L + + + A L+F Y +L IIH DLKP NVL +++ +
Sbjct: 223 GGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLI 281
Query: 283 HLSDFGIAKLL 293
++DFG +K+L
Sbjct: 282 KITDFGHSKIL 292
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 18/85 (21%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYVYSFGIML 323
++H DLKP+NV D L DFG+A++L + F +T Y S
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF---AKTFVGTPYYMS--------- 184
Query: 324 LEVFTRKKPTNKIFFSQRNDIKALG 348
+ N++ +++++DI +LG
Sbjct: 185 ------PEQMNRMSYNEKSDIWSLG 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 22/124 (17%)
Query: 229 LVLEYMPRGSLEKCLYSSNYVGF------------ALEYLHFDYSVLIIHYDLKPSNVLF 276
+ +E+M GSL++ L + + L YL + I+H D+KPSN+L
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILV 138
Query: 277 DDNIVTHLSDFGIAKLLIRE--------DHFMIQTQTLATIGYMASYVYSFGIMLLEVFT 328
+ L DFG++ LI +M + T + S ++S G+ L+E+
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 329 RKKP 332
+ P
Sbjct: 199 GRYP 202
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 164 ISRGGFGSIHKARIQDRMEF-SVKGFHLQCS--GAFKSFDFECDVMKSTCYRNLIKIISS 220
I G +G++ KA+ ++ E ++K L G S E ++K ++N++++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 221 RSNEDFKVLVLEYMPRGSLEKCLYSSN----------YVGFALEYLHFDYSVLIIHYDLK 270
++ LV E+ + L+K S N ++ L+ L F +S ++H DLK
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLK 128
Query: 271 PSNVLFDDNIVTHLSDFGIAK 291
P N+L + N L++FG+A+
Sbjct: 129 PQNLLINRNGELKLANFGLAR 149
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 21/133 (15%)
Query: 176 RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMP 235
RI + +F++ G + A + + E +++K + +IKI + ED+ +VLE M
Sbjct: 180 RIISKRKFAI-GSAREADPAL-NVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELME 236
Query: 236 RGSL------------EKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLF---DDNI 280
G L C + A++YLH + IIH DLKP NVL +++
Sbjct: 237 GGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDC 293
Query: 281 VTHLSDFGIAKLL 293
+ ++DFG +K+L
Sbjct: 294 LIKITDFGHSKIL 306
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 22/124 (17%)
Query: 229 LVLEYMPRGSLEKCLYSSNYVGF------------ALEYLHFDYSVLIIHYDLKPSNVLF 276
+ +E+M GSL++ L + + L YL + I+H D+KPSN+L
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILV 138
Query: 277 DDNIVTHLSDFGIAKLLIRE--------DHFMIQTQTLATIGYMASYVYSFGIMLLEVFT 328
+ L DFG++ LI +M + T + S ++S G+ L+E+
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 329 RKKP 332
+ P
Sbjct: 199 GRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 22/124 (17%)
Query: 229 LVLEYMPRGSLEKCLYSSNYVGF------------ALEYLHFDYSVLIIHYDLKPSNVLF 276
+ +E+M GSL++ L + + L YL + I+H D+KPSN+L
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILV 138
Query: 277 DDNIVTHLSDFGIAKLLIRE--------DHFMIQTQTLATIGYMASYVYSFGIMLLEVFT 328
+ L DFG++ LI +M + T + S ++S G+ L+E+
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 329 RKKP 332
+ P
Sbjct: 199 GRYP 202
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 153 RVTNGFSEDNLISRGGFGSIHK-ARIQDRMEFSVKGFHLQCSGA--FKSFDFECDVMKST 209
+ ++ + + +G F + + +EF+ K + + A F+ + E + +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 210 CYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFA---------LEYLHFDY 260
+ N++++ S E F LV + + G L + + + + A LE + + +
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 122
Query: 261 SVLIIHYDLKPSNVLFDDN---IVTHLSDFGIA 290
S I+H +LKP N+L L+DFG+A
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 19/100 (19%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFM---IQTQTLAT 308
LEYLH + IH D+K N+L ++ ++DFG++ L ++ + T
Sbjct: 128 GLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 309 IGYMASYV-------------YSFGIMLLEVFTRKKPTNK 335
+MA V +SFGI +E+ T P +K
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 224
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 164 ISRGGFGSIHKARIQDRMEF-SVKGF-HLQCSGAFKSFDF-ECDVMKSTCYRNLIKIISS 220
I G +G + K R +D + ++K F + K E ++K + NL+ ++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 221 RSNEDFKVLVLEYMP-----------RGSLEKCLYSSNYVGFALEYLHFDYSVLIIHYDL 269
+ LV EY RG E + S + L+ ++F + IH D+
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ--TLQAVNFCHKHNCIHRDV 128
Query: 270 KPSNVLFDDNIVTHLSDFGIAKLL 293
KP N+L + V L DFG A+LL
Sbjct: 129 KPENILITKHSVIKLCDFGFARLL 152
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 253 LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYM 312
LE +H + I+H DLKP+N L D ++ L DFGIA + + +++ + + YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGAVNYM 223
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 24/129 (18%)
Query: 229 LVLEYMPRGSLEKCLYSSNYVGF-----------ALEYLHFDYSVLIIHYDLKPSNVLFD 277
+++EY+ GS L + + F L+YLH + IH D+K +NVL
Sbjct: 98 IIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK---IHRDIKAANVLLS 154
Query: 278 DNIVTHLSDFGIAKLL----IREDHFM-----IQTQTLATIGYMA-SYVYSFGIMLLEVF 327
+ L+DFG+A L I+ + F+ + + + Y + + ++S GI +E+
Sbjct: 155 EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELA 214
Query: 328 TRKKPTNKI 336
+ P + +
Sbjct: 215 KGEPPNSDM 223
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 19/100 (19%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFM---IQTQTLAT 308
LEYLH + IH D+K N+L ++ ++DFG++ L ++ + T
Sbjct: 133 GLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 309 IGYMASYV-------------YSFGIMLLEVFTRKKPTNK 335
+MA V +SFGI +E+ T P +K
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 229
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 18/85 (21%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYVYSFGIML 323
++H DLKP+NV D L DFG+A++L + F + T YM+
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA--KAFVGTPYYMSP--------- 185
Query: 324 LEVFTRKKPTNKIFFSQRNDIKALG 348
+ N++ +++++DI +LG
Sbjct: 186 -------EQMNRMSYNEKSDIWSLG 203
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL 293
A++Y H +++H DLKP NVL D ++ ++DFG++ ++
Sbjct: 123 AVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 161
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 153 RVTNGFSEDNLISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGA--FKSFDFECDVMKST 209
+ ++ + + +G F + + +EF+ K + + A F+ + E + +
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 210 CYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFA---------LEYLHFDY 260
+ N++++ S E F LV + + G L + + + + A LE + + +
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 121
Query: 261 SVLIIHYDLKPSNVLFDDN---IVTHLSDFGIA 290
S I+H +LKP N+L L+DFG+A
Sbjct: 122 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 154
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 153 RVTNGFSEDNLISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGA--FKSFDFECDVMKST 209
+ ++ + + +G F + + +EF+ K + + A F+ + E + +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 210 CYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFA---------LEYLHFDY 260
+ N++++ S E F LV + + G L + + + + A LE + + +
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 122
Query: 261 SVLIIHYDLKPSNVLFDDN---IVTHLSDFGIA 290
S I+H +LKP N+L L+DFG+A
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 89/221 (40%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 214 LIKIISSRSNEDFKVLVLEYMP-----------RGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE M RG+L++ L S + LE + ++
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 133
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 189
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 190 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 230
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 158 FSEDNLISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIK 216
++ +N I RG +G + A + R+ + K F E ++MKS + N+I+
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 217 IISSRSNEDFKVLVLEYMPRGSL-EKCLY--------SSNYVGFALEYLHFDYSVLIIHY 267
+ + + LV+E G L E+ ++ ++ + L + + + + + H
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHR 130
Query: 268 DLKPSNVLF---DDNIVTHLSDFGIA 290
DLKP N LF + L DFG+A
Sbjct: 131 DLKPENFLFLTDSPDSPLKLIDFGLA 156
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL 293
A++Y H +++H DLKP NVL D ++ ++DFG++ ++
Sbjct: 123 AVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 161
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 158 FSEDNLISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIK 216
++ +N I RG +G + A + R+ + K F E ++MKS + N+I+
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 217 IISSRSNEDFKVLVLEYMPRGSL-EKCLY--------SSNYVGFALEYLHFDYSVLIIHY 267
+ + + LV+E G L E+ ++ ++ + L + + + + + H
Sbjct: 88 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHR 147
Query: 268 DLKPSNVLF---DDNIVTHLSDFGIA 290
DLKP N LF + L DFG+A
Sbjct: 148 DLKPENFLFLTDSPDSPLKLIDFGLA 173
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCL-----YSSNYVGF----- 251
E ++++ + L+K+ S + +V+EY+ G + L +S + F
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
EYLH S+ +I+ DLKP N++ D ++DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK 189
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 15/142 (10%)
Query: 164 ISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGA--FKSFDFECDVMKSTCYRNLIKIISS 220
+ +G F + + +I E++ K + + A + + E + + + N++++ S
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 221 RSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFA---------LEYLHFDYSVLIIHYDLKP 271
S E F LV + + G L + + + Y A LE ++ + I+H DLKP
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKP 131
Query: 272 SNVLF---DDNIVTHLSDFGIA 290
N+L L+DFG+A
Sbjct: 132 ENLLLASKSKGAAVKLADFGLA 153
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 12/144 (8%)
Query: 162 NLISRGGFGSIHKARIQDRMEF-SVKGFHLQCSGAF--KSFDFECDVMKSTCYRNLIKII 218
L+ G +G + K R +D ++K F K E ++K + NL+ ++
Sbjct: 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL 90
Query: 219 SSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFAL--EYL-------HFDYSVLIIHYDL 269
+ LV E++ L+ N + + + +YL F +S IIH D+
Sbjct: 91 EVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDI 150
Query: 270 KPSNVLFDDNIVTHLSDFGIAKLL 293
KP N+L + V L DFG A+ L
Sbjct: 151 KPENILVSQSGVVKLCDFGFARTL 174
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 142 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 201
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 202 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 239
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 199
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 200 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 237
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 199
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 200 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 237
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 15/142 (10%)
Query: 164 ISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGA--FKSFDFECDVMKSTCYRNLIKIISS 220
+ +G F + + +I E++ K + + A + + E + + + N++++ S
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 221 RSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFA---------LEYLHFDYSVLIIHYDLKP 271
S E F LV + + G L + + + Y A LE ++ + I+H DLKP
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKP 131
Query: 272 SNVLF---DDNIVTHLSDFGIA 290
N+L L+DFG+A
Sbjct: 132 ENLLLASKSKGAAVKLADFGLA 153
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 200
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 201 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 238
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 204
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 205 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 242
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 235
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 144 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 203
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 204 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 241
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 198
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 199 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 236
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 200
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 201 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 238
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 204
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 205 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 242
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 200
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 201 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 238
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 200
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 201 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 238
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 204
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 205 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 242
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 235
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 235
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 78/204 (38%), Gaps = 44/204 (21%)
Query: 164 ISRGGFGSIHKARIQD----RMEFSVKGFHLQCSGAFKS---FDFECDVMKSTCYRNLIK 216
+ +G FG +++ +D E V + S + + F E VMK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 217 IISSRSNEDFKVLVLEYMPRGSLEKCLYS----------------------SNYVGFALE 254
++ S ++V+E M G L+ L S + + +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 255 YLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA- 313
YL+ + +H DL N + + + DFG+ + + D + L + +MA
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 314 -----------SYVYSFGIMLLEV 326
S ++SFG++L E+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 235
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 235
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 80/204 (39%), Gaps = 44/204 (21%)
Query: 164 ISRGGFGSIHKARIQD----RMEFSVKGFHLQCSGAFKS---FDFECDVMKSTCYRNLIK 216
+ +G FG +++ +D E V + S + + F E VMK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 217 IISSRSNEDFKVLVLEYMPRGSLEKCLYS----------------------SNYVGFALE 254
++ S ++V+E M G L+ L S + + +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 255 YLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA- 313
YL+ + +H +L N + + + DFG+ + + D++ + L + +MA
Sbjct: 145 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 314 -----------SYVYSFGIMLLEV 326
S ++SFG++L E+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 11/70 (15%)
Query: 241 KCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFM 300
KC+ S F+ Y+H + + I H D+KPSN+L D N LSDFG E +M
Sbjct: 154 KCIIKSVLNSFS--YIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFG-------ESEYM 202
Query: 301 IQTQTLATIG 310
+ + + G
Sbjct: 203 VDKKIKGSRG 212
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 178
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 179 --MTGYVATRWYRAPEIML---------NAMHYNQTVDIWSVG 210
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 80/213 (37%), Gaps = 47/213 (22%)
Query: 162 NLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLI------ 215
LI +G FG ++ R + + K+F E + T + N++
Sbjct: 39 ELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 216 ------KIISSRSN--------EDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYS 261
II+S D K+++ + K + + + YLH +
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVRDAKIVL-------DVNKTRQIAQEIVKGMGYLH---A 148
Query: 262 VLIIHYDLKPSNVLFDDNIVTHLSDF------GIAKLLIREDHFMIQTQTLATIGYMASY 315
I+H DLK NV +D+ V ++DF G+ + RED IQ +
Sbjct: 149 KGILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQN----------GW 197
Query: 316 VYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
+ ++ + +K+ FS+ +D+ ALG
Sbjct: 198 LCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALG 230
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 80/204 (39%), Gaps = 44/204 (21%)
Query: 164 ISRGGFGSIHKARIQD----RMEFSVKGFHLQCSGAFKS---FDFECDVMKSTCYRNLIK 216
+ +G FG +++ +D E V + S + + F E VMK ++++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 217 IISSRSNEDFKVLVLEYMPRGSLEKCLYS----------------------SNYVGFALE 254
++ S ++V+E M G L+ L S + + +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 255 YLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA- 313
YL+ + +H +L N + + + DFG+ + + D++ + L + +MA
Sbjct: 146 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 314 -----------SYVYSFGIMLLEV 326
S ++SFG++L E+
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 138 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--------- 185
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 186 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 217
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 138 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--------- 185
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 186 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 148 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 207
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 208 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 245
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 172 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 231
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 232 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 269
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 198
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 199 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 236
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 203 CDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFA---------L 253
C ++K + N++++ S S E F LV + + G L + + + Y A L
Sbjct: 57 CRLLK---HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQIL 113
Query: 254 EYLHFDYSVLIIHYDLKPSNVLFDDN---IVTHLSDFGIA 290
E + + + ++H DLKP N+L L+DFG+A
Sbjct: 114 EAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA 153
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 138 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--------- 185
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 186 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 217
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 78/204 (38%), Gaps = 44/204 (21%)
Query: 164 ISRGGFGSIHKARIQD----RMEFSVKGFHLQCSGAFKS---FDFECDVMKSTCYRNLIK 216
+ +G FG +++ +D E V + S + + F E VMK ++++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 217 IISSRSNEDFKVLVLEYMPRGSLEKCLYS----------------------SNYVGFALE 254
++ S ++V+E M G L+ L S + + +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 255 YLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA- 313
YL+ + +H DL N + + + DFG+ + + D + L + +MA
Sbjct: 142 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 314 -----------SYVYSFGIMLLEV 326
S ++SFG++L E+
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 78/204 (38%), Gaps = 44/204 (21%)
Query: 164 ISRGGFGSIHKARIQD----RMEFSVKGFHLQCSGAFKS---FDFECDVMKSTCYRNLIK 216
+ +G FG +++ +D E V + S + + F E VMK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 217 IISSRSNEDFKVLVLEYMPRGSLEKCLYS----------------------SNYVGFALE 254
++ S ++V+E M G L+ L S + + +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 255 YLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA- 313
YL+ + +H DL N + + + DFG+ + + D + L + +MA
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 314 -----------SYVYSFGIMLLEV 326
S ++SFG++L E+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 135 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 194
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 195 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 232
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL 293
+++H DLKP NVL D ++ ++DFG++ ++
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADFGLSNMM 166
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 67/152 (44%), Gaps = 24/152 (15%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-----------VG 250
E +M+ + N++ + SS D +V+E++ G+L + + V
Sbjct: 92 EVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVL 151
Query: 251 FALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE---------DHFMI 301
AL YLH + +IH D+K ++L + LSDFG + +E + +
Sbjct: 152 RALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWM 208
Query: 302 QTQTLATIGYMASY-VYSFGIMLLEVFTRKKP 332
+ ++ + Y ++S GIM++E+ + P
Sbjct: 209 APEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 163 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 222
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 223 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 260
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 27/153 (17%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E + T+
Sbjct: 151 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRW 207
Query: 306 LATIGYMASY--------VYSFGIMLLEVFTRK 330
M ++ ++S G ++ E+ T +
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG+AKLL E+ I +MA
Sbjct: 132 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 191
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 192 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 229
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE 296
ALE+LH SV IH D+KPSNVL + DFGI+ L+ +
Sbjct: 148 ALEHLHSKLSV--IHRDVKPSNVLINALGQVKXCDFGISGYLVDD 190
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL 126
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 127 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 174
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 175 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 206
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 20/143 (13%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
I +G F + AR I E ++K L + K F E +MK + N++K+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 78
Query: 220 SRSNEDFKVLVLEYMPRGSL-----------EKCLYSS-NYVGFALEYLHFDYSVLIIHY 267
E L++EY G + EK S + A++Y H I+H
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH---QKRIVHR 135
Query: 268 DLKPSNVLFDDNIVTHLSDFGIA 290
DLK N+L D ++ ++DFG +
Sbjct: 136 DLKAENLLLDADMNIKIADFGFS 158
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 27/153 (17%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E + T+
Sbjct: 127 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRW 183
Query: 306 LATIGYMASY--------VYSFGIMLLEVFTRK 330
M ++ ++S G ++ E+ T +
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 20/143 (13%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
I +G F + AR I E ++K L + K F E +MK + N++K+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 81
Query: 220 SRSNEDFKVLVLEYMPRGSL-----------EKCLYSS-NYVGFALEYLHFDYSVLIIHY 267
E L++EY G + EK S + A++Y H I+H
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH---QKRIVHR 138
Query: 268 DLKPSNVLFDDNIVTHLSDFGIA 290
DLK N+L D ++ ++DFG +
Sbjct: 139 DLKAENLLLDADMNIKIADFGFS 161
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 75/174 (43%), Gaps = 24/174 (13%)
Query: 156 NGFSEDNLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLI 215
FSE ++ G ++ +I ++ + +G + C F E DV+ + R +
Sbjct: 72 GAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRG-EVSC------FREERDVLVNGDRRWIT 124
Query: 216 KIISSRSNEDFKVLVLEYMPRGSL-------------EKCLYSSNYVGFALEYLHFDYSV 262
++ + +E++ LV+EY G L E + + A++ +H +
Sbjct: 125 QLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RL 181
Query: 263 LIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV 316
+H D+KP N+L D L+DFG + L +R D + + T Y++ +
Sbjct: 182 GYVHRDIKPDNILLDRCGHIRLADFG-SCLKLRADGTVRSLVAVGTPDYLSPEI 234
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 136 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE--------- 183
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 184 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 215
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 137 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 184
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 185 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 216
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 136 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE--------- 183
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 184 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 215
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 137 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 184
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 185 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 216
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 82/206 (39%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIHKARIQ------DRMEFSVKGFHLQCSGAFK-SFDFECDVMKSTCYRNLIK 216
+ G FG +++ ++ ++ +VK CS + F E ++ ++N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 217 IISSR-------------SNEDFKVLVLEYMPRGS------LEKCLYSSNYVGFALEYLH 257
I + D K + E PR S + L+ + + +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 258 FDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLLIREDHF------MIQTQTLAT 308
++ IH D+ N L V + DFG+A+ + R ++ M+ + +
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 309 IGYMA------SYVYSFGIMLLEVFT 328
+M + +SFG++L E+F+
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 81 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 140
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 141 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 188
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 189 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 141
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 142 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE--------- 189
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 190 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 221
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 27/151 (17%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E + T+
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRW 187
Query: 306 LATIGYMASY--------VYSFGIMLLEVFT 328
M ++ ++S G ++ E+ T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 27/151 (17%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E + T+
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRW 187
Query: 306 LATIGYMASY--------VYSFGIMLLEVFT 328
M ++ ++S G ++ E+ T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 149
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 150 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 197
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 198 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 229
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 151 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 198
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 199 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 230
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 178
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 179 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 210
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 82/206 (39%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIHKARIQ------DRMEFSVKGFHLQCSGAFK-SFDFECDVMKSTCYRNLIK 216
+ G FG +++ ++ ++ +VK CS + F E ++ ++N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 217 IISSR-------------SNEDFKVLVLEYMPRGS------LEKCLYSSNYVGFALEYLH 257
I + D K + E PR S + L+ + + +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 258 FDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLLIREDHF------MIQTQTLAT 308
++ IH D+ N L V + DFG+A+ + R ++ M+ + +
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 309 IGYMA------SYVYSFGIMLLEVFT 328
+M + +SFG++L E+F+
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 149
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 150 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 197
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 198 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 229
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 178
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 179 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 210
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 133 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 180
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 181 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 212
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 136 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 183
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 184 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 215
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 178
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 179 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 210
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 69 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 128
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 129 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 176
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 177 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 208
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 129
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 130 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 177
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 178 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 209
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 127 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 174
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 175 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 206
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 178
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 179 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 210
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 151 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 198
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 199 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 230
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 133 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 180
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 181 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 212
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 178
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 179 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 210
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 178
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 179 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 210
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 27/153 (17%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E + T+
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRW 187
Query: 306 LATIGYMASY--------VYSFGIMLLEVFTRK 330
M ++ ++S G ++ E+ T +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 127 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 174
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 175 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 206
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 127
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 128 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 175
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 176 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 207
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 133 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 180
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 181 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 212
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 127
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 128 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 175
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 176 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 207
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 137 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 184
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 185 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 216
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 153
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 154 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 201
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 202 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 233
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 178
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 179 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 210
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 141
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 142 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 189
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 190 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 221
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 136 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 183
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 184 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 215
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 138 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 185
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 186 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 178
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 179 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 210
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 13/95 (13%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL----IREDHFM-----IQ 302
L+YLH + IH D+K +NVL ++ L+DFG+A L I+ + F+ +
Sbjct: 131 GLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMA 187
Query: 303 TQTLATIGYMA-SYVYSFGIMLLEVFTRKKPTNKI 336
+ + Y + + ++S GI +E+ + P +++
Sbjct: 188 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 222
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 142
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 143 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 190
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 191 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 222
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAK 291
+G A+++LH S I H D+KP N+L+ + + V L+DFG AK
Sbjct: 137 IGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 142
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 143 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 190
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 191 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 222
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 142
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 143 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------- 190
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 191 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 222
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 82/206 (39%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIHKARIQ------DRMEFSVKGFHLQCSGAFK-SFDFECDVMKSTCYRNLIK 216
+ G FG +++ ++ ++ +VK CS + F E ++ ++N+++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 217 IISSR-------------SNEDFKVLVLEYMPRGS------LEKCLYSSNYVGFALEYLH 257
I + D K + E PR S + L+ + + +YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 258 FDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLLIREDHF------MIQTQTLAT 308
++ IH D+ N L V + DFG+A+ + R ++ M+ + +
Sbjct: 150 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 309 IGYMA------SYVYSFGIMLLEVFT 328
+M + +SFG++L E+F+
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 82/206 (39%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIHKARIQ------DRMEFSVKGFHLQCSGAFK-SFDFECDVMKSTCYRNLIK 216
+ G FG +++ ++ ++ +VK CS + F E ++ ++N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 217 IISSR-------------SNEDFKVLVLEYMPRGS------LEKCLYSSNYVGFALEYLH 257
I + D K + E PR S + L+ + + +YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 258 FDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLLIREDHF------MIQTQTLAT 308
++ IH D+ N L V + DFG+A+ + R ++ M+ + +
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 309 IGYMA------SYVYSFGIMLLEVFT 328
+M + +SFG++L E+F+
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAK 291
+G A+++LH S I H D+KP N+L+ + + V L+DFG AK
Sbjct: 118 IGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 160
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 29/147 (19%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVG----------- 250
E + +K+ ++++ ++ + +VLEY P G L + S + +
Sbjct: 58 EIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQI 117
Query: 251 -FALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATI 309
A+ Y+H S H DLKP N+LFD+ L DFG+ + +QT ++
Sbjct: 118 VSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSL 173
Query: 310 GYMA-------SY------VYSFGIML 323
Y A SY V+S GI+L
Sbjct: 174 AYAAPELIQGKSYLGSEADVWSMGILL 200
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 13/95 (13%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL----IREDHFM-----IQ 302
L+YLH + IH D+K +NVL ++ L+DFG+A L I+ + F+ +
Sbjct: 116 GLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMA 172
Query: 303 TQTLATIGYMA-SYVYSFGIMLLEVFTRKKPTNKI 336
+ + Y + + ++S GI +E+ + P +++
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)
Query: 152 CRVTNGFSEDNLISRGGFGSIHK-ARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTC 210
R T F E I G FGS+ K + D +++K +G+ + +V
Sbjct: 3 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 62
Query: 211 ---YRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-----------------VG 250
+ ++++ S+ + +D ++ EY GSL + S NY VG
Sbjct: 63 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVG 121
Query: 251 FALEYLHFDYSVLIIHYDLKPSNV 274
L Y+H S+ ++H D+KPSN+
Sbjct: 122 RGLRYIH---SMSLVHMDIKPSNI 142
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 6/44 (13%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKL 292
A+ ++H V ++H DLKP N+LF +DN+ + DFG A+L
Sbjct: 118 AVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 82/206 (39%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIHKARIQ------DRMEFSVKGFHLQCSGAFK-SFDFECDVMKSTCYRNLIK 216
+ G FG +++ ++ ++ +VK CS + F E ++ ++N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 217 IISSR-------------SNEDFKVLVLEYMPRGS------LEKCLYSSNYVGFALEYLH 257
I + D K + E PR S + L+ + + +YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 258 FDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLLIREDHF------MIQTQTLAT 308
++ IH D+ N L V + DFG+A+ + R ++ M+ + +
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 309 IGYMA------SYVYSFGIMLLEVFT 328
+M + +SFG++L E+F+
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 27/153 (17%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 153
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E + T+
Sbjct: 154 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRW 210
Query: 306 LATIGYMASY--------VYSFGIMLLEVFTRK 330
M ++ ++S G ++ E+ T +
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 89/215 (41%), Gaps = 39/215 (18%)
Query: 161 DNLISRGGFGSIHKA----RIQDRMEFSVKGFHLQCSGAFKS-FDFECDVMKSTCYRNLI 215
+ ++ G FG +++ +++ +VK C+ K F E +MK+ + +++
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEK--------------CLYSSNYVGFALEYLHFDYS 261
K+I E+ +++E P G L LYS + A+ YL S
Sbjct: 73 KLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ-ICKAMAYLE---S 127
Query: 262 VLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYM--------- 312
+ +H D+ N+L L DFG+++ + ED++ L I +M
Sbjct: 128 INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRR 186
Query: 313 ---ASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDI 344
AS V+ F + + E+ + K F+ + D+
Sbjct: 187 FTTASDVWMFAVCMWEILSFGK--QPFFWLENKDV 219
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 17/97 (17%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGY 311
L+YLH + IH D+K +NVL ++ L+DFG+A L D + + + T +
Sbjct: 116 GLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFW 170
Query: 312 MASYV------------YSFGIMLLEVFTRKKPTNKI 336
MA V +S GI +E+ + P +++
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 89/215 (41%), Gaps = 39/215 (18%)
Query: 161 DNLISRGGFGSIHKA----RIQDRMEFSVKGFHLQCSGAFKS-FDFECDVMKSTCYRNLI 215
+ ++ G FG +++ +++ +VK C+ K F E +MK+ + +++
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEK--------------CLYSSNYVGFALEYLHFDYS 261
K+I E+ +++E P G L LYS + A+ YL S
Sbjct: 89 KLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ-ICKAMAYLE---S 143
Query: 262 VLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYM--------- 312
+ +H D+ N+L L DFG+++ + ED++ L I +M
Sbjct: 144 INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRR 202
Query: 313 ---ASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDI 344
AS V+ F + + E+ + K F+ + D+
Sbjct: 203 FTTASDVWMFAVCMWEILSFGK--QPFFWLENKDV 235
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 230 VLEYMPRGSLEKCLYSS--NYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDF 287
L+ + G LE+ ++ + L+YLH S IH D+K +NVL + L+DF
Sbjct: 104 ALDLLKPGPLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADF 160
Query: 288 GIAKLL----IREDHFM-----IQTQTLATIGY-MASYVYSFGIMLLEVFTRKKPTNKI 336
G+A L I+ + F+ + + + Y + ++S GI +E+ + P + +
Sbjct: 161 GVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 137 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE--------- 184
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 185 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 216
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 25/143 (17%)
Query: 153 RVTNGFSEDNLISRGGFGSIHK-ARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTC- 210
R T F E I G FGS+ K + D +++K +G+ + +V
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 211 --YRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-----------------VGF 251
+ ++++ S+ + +D ++ EY GSL + S NY VG
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGR 124
Query: 252 ALEYLHFDYSVLIIHYDLKPSNV 274
L Y+H S+ ++H D+KPSN+
Sbjct: 125 GLRYIH---SMSLVHMDIKPSNI 144
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 25/143 (17%)
Query: 153 RVTNGFSEDNLISRGGFGSIHK-ARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTC- 210
R T F E I G FGS+ K + D +++K +G+ + +V
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 211 --YRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-----------------VGF 251
+ ++++ S+ + +D ++ EY GSL + S NY VG
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGR 124
Query: 252 ALEYLHFDYSVLIIHYDLKPSNV 274
L Y+H S+ ++H D+KPSN+
Sbjct: 125 GLRYIH---SMSLVHMDIKPSNI 144
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 82/206 (39%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIHKARIQ------DRMEFSVKGFHLQCSGAFK-SFDFECDVMKSTCYRNLIK 216
+ G FG +++ ++ ++ +VK CS + F E ++ ++N+++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 217 IISSR-------------SNEDFKVLVLEYMPRGS------LEKCLYSSNYVGFALEYLH 257
I + D K + E PR S + L+ + + +YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 258 FDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLLIREDHF------MIQTQTLAT 308
++ IH D+ N L V + DFG+A+ + R ++ M+ + +
Sbjct: 165 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 309 IGYMA------SYVYSFGIMLLEVFT 328
+M + +SFG++L E+F+
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 24/144 (16%)
Query: 203 CDVMKSTCYRNLIKIISSRSNEDFKVL---VLEYMPRGSLEKCLYSSNYVGFALEYLHFD 259
D++K R + +N DFK L + +Y R + + L AL+Y H
Sbjct: 98 ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK-------ALDYCH-- 148
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIREDHFMIQTQTLATIG-------Y 311
S+ I+H D+KP NVL D ++ L D+G+A+ + ++ + G
Sbjct: 149 -SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 312 MASY---VYSFGIMLLEVFTRKKP 332
M Y ++S G ML + RK+P
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 82/206 (39%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIHKARIQ------DRMEFSVKGFHLQCSGAFK-SFDFECDVMKSTCYRNLIK 216
+ G FG +++ ++ ++ +VK CS + F E ++ ++N+++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 217 IISSR-------------SNEDFKVLVLEYMPRGS------LEKCLYSSNYVGFALEYLH 257
I + D K + E PR S + L+ + + +YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 258 FDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLLIREDHF------MIQTQTLAT 308
++ IH D+ N L V + DFG+A+ + R ++ M+ + +
Sbjct: 175 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 309 IGYMA------SYVYSFGIMLLEVFT 328
+M + +SFG++L E+F+
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 25/143 (17%)
Query: 153 RVTNGFSEDNLISRGGFGSIHK-ARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKSTC- 210
R T F E I G FGS+ K + D +++K +G+ + +V
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 211 --YRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-----------------VGF 251
+ ++++ S+ + +D ++ EY GSL + S NY VG
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGR 126
Query: 252 ALEYLHFDYSVLIIHYDLKPSNV 274
L Y+H S+ ++H D+KPSN+
Sbjct: 127 GLRYIH---SMSLVHMDIKPSNI 146
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E
Sbjct: 133 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE--------- 180
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 181 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 212
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 79/204 (38%), Gaps = 44/204 (21%)
Query: 164 ISRGGFGSIHKARIQD----RMEFSVKGFHLQCSGAFKS---FDFECDVMKSTCYRNLIK 216
+ +G FG +++ +D E V + S + + F E VMK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 217 IISSRSNEDFKVLVLEYMPRGSLEKCLYS----------------------SNYVGFALE 254
++ S ++V+E M G L+ L S + + +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 255 YLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA- 313
YL+ + +H DL N + + + DFG+ + + ++ + L + +MA
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 314 -----------SYVYSFGIMLLEV 326
S ++SFG++L E+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 82/206 (39%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIHKARIQ------DRMEFSVKGFHLQCSGAFK-SFDFECDVMKSTCYRNLIK 216
+ G FG +++ ++ ++ +VK CS + F E ++ ++N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 217 IISSR-------------SNEDFKVLVLEYMPRGS------LEKCLYSSNYVGFALEYLH 257
I + D K + E PR S + L+ + + +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 258 FDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLLIREDHF------MIQTQTLAT 308
++ IH D+ N L V + DFG+A+ + R ++ M+ + +
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 309 IGYMA------SYVYSFGIMLLEVFT 328
+M + +SFG++L E+F+
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 39/91 (42%)
Query: 47 PPLRPPQQENLSLASNELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIY 106
P P E L L S L ++ +TF L + +LNL N L ++L L +
Sbjct: 30 PSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLG 89
Query: 107 FSMNNFAGVIPNAIGCLNILQHLFLGYNRLQ 137
+ N A + L L L+LG N+L+
Sbjct: 90 LANNQLASLPLGVFDHLTQLDKLYLGGNQLK 120
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 23/97 (23%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGY 311
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E GY
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----------MTGY 182
Query: 312 MASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
+A+ Y ++L N + ++Q DI ++G
Sbjct: 183 VATRWYRAPEIML---------NWMHYNQTVDIWSVG 210
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 82/206 (39%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIHKARIQ------DRMEFSVKGFHLQCSGAFK-SFDFECDVMKSTCYRNLIK 216
+ G FG +++ ++ ++ +VK CS + F E ++ ++N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 217 IISSR-------------SNEDFKVLVLEYMPRGS------LEKCLYSSNYVGFALEYLH 257
I + D K + E PR S + L+ + + +YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 258 FDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLLIREDHF------MIQTQTLAT 308
++ IH D+ N L V + DFG+A+ + R ++ M+ + +
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 309 IGYMA------SYVYSFGIMLLEVFT 328
+M + +SFG++L E+F+
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 89/215 (41%), Gaps = 39/215 (18%)
Query: 161 DNLISRGGFGSIHKA----RIQDRMEFSVKGFHLQCSGAFKS-FDFECDVMKSTCYRNLI 215
+ ++ G FG +++ +++ +VK C+ K F E +MK+ + +++
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEK--------------CLYSSNYVGFALEYLHFDYS 261
K+I E+ +++E P G L LYS + A+ YL S
Sbjct: 77 KLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ-ICKAMAYLE---S 131
Query: 262 VLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYM--------- 312
+ +H D+ N+L L DFG+++ + ED++ L I +M
Sbjct: 132 INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRR 190
Query: 313 ---ASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDI 344
AS V+ F + + E+ + K F+ + D+
Sbjct: 191 FTTASDVWMFAVCMWEILSFGK--QPFFWLENKDV 223
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 23/97 (23%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGY 311
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E GY
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----------MTGY 182
Query: 312 MASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
+A+ Y ++L N + ++Q DI ++G
Sbjct: 183 VATRWYRAPEIML---------NWMHYNQTVDIWSVG 210
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 39/91 (42%)
Query: 47 PPLRPPQQENLSLASNELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIY 106
P P E L L S L ++ +TF L + +LNL N L ++L L +
Sbjct: 30 PSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLG 89
Query: 107 FSMNNFAGVIPNAIGCLNILQHLFLGYNRLQ 137
+ N A + L L L+LG N+L+
Sbjct: 90 LANNQLASLPLGVFDHLTQLDKLYLGGNQLK 120
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 82/206 (39%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIHKARIQ------DRMEFSVKGFHLQCSGAFK-SFDFECDVMKSTCYRNLIK 216
+ G FG +++ ++ ++ +VK CS + F E ++ ++N+++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 217 IISSR-------------SNEDFKVLVLEYMPRGS------LEKCLYSSNYVGFALEYLH 257
I + D K + E PR S + L+ + + +YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 258 FDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLLIREDHF------MIQTQTLAT 308
++ IH D+ N L V + DFG+A+ + R ++ M+ + +
Sbjct: 176 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 309 IGYMA------SYVYSFGIMLLEVFT 328
+M + +SFG++L E+F+
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGY 311
L+Y+H S IIH DLKPSN+ +++ + DFG+A+ E + T+
Sbjct: 166 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 222
Query: 312 MASY--------VYSFGIMLLEVFT 328
M ++ ++S G ++ E+ T
Sbjct: 223 MLNWMHYNMTVDIWSVGCIMAELLT 247
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 13/95 (13%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL----IREDHFM-----IQ 302
L+YLH + IH D+K +NVL ++ L+DFG+A L I+ + F+ +
Sbjct: 136 GLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMA 192
Query: 303 TQTLATIGYMA-SYVYSFGIMLLEVFTRKKPTNKI 336
+ + Y + + ++S GI +E+ + P +++
Sbjct: 193 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 227
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 82/206 (39%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIHKARIQ------DRMEFSVKGFHLQCSGAFK-SFDFECDVMKSTCYRNLIK 216
+ G FG +++ ++ ++ +VK CS + F E ++ ++N+++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 217 IISSR-------------SNEDFKVLVLEYMPRGS------LEKCLYSSNYVGFALEYLH 257
I + D K + E PR S + L+ + + +YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 258 FDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLLIREDHF------MIQTQTLAT 308
++ IH D+ N L V + DFG+A+ + R ++ M+ + +
Sbjct: 185 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 309 IGYMA------SYVYSFGIMLLEVFT 328
+M + +SFG++L E+F+
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 149
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 205
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 206 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 246
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 82/206 (39%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIHKARIQ------DRMEFSVKGFHLQCSGAFK-SFDFECDVMKSTCYRNLIK 216
+ G FG +++ ++ ++ +VK CS + F E ++ ++N+++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 217 IISSR-------------SNEDFKVLVLEYMPRGS------LEKCLYSSNYVGFALEYLH 257
I + D K + E PR S + L+ + + +YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 258 FDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLLIREDHF------MIQTQTLAT 308
++ IH D+ N L V + DFG+A+ + R ++ M+ + +
Sbjct: 199 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 309 IGYMA------SYVYSFGIMLLEVFT 328
+M + +SFG++L E+F+
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 24/144 (16%)
Query: 203 CDVMKSTCYRNLIKIISSRSNEDFKVL---VLEYMPRGSLEKCLYSSNYVGFALEYLHFD 259
D++K R + +N DFK L + +Y R + + L AL+Y H
Sbjct: 98 ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK-------ALDYCH-- 148
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIREDHFMIQTQTLATIG-------Y 311
S+ I+H D+KP NV+ D ++ L D+G+A+ + ++ + G
Sbjct: 149 -SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 312 MASY---VYSFGIMLLEVFTRKKP 332
M Y ++S G ML + RK+P
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 176
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 232
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 233 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 273
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 181
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 182 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 237
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 238 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 278
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 176
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 232
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 233 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 273
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 149
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 205
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 206 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 246
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 148
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 204
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 205 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 245
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG AKLL E+ I +MA
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 199
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 200 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 237
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 149
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 205
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 206 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 246
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG AKLL E+ I +MA
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 199
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 200 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 237
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 161
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 217
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 218 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQR 258
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 168
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 169 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 224
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 225 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 265
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 162
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 218
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 219 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQR 259
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG AKLL E+ I +MA
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 204
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 205 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 242
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 161
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 217
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 218 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQR 258
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 161
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 217
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 218 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 258
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 31/140 (22%)
Query: 229 LVLEYMPRGSL------------EKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLF 276
V+EY+ G L E + S + AL YLH II+ DLK NVL
Sbjct: 130 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLL 186
Query: 277 DDNIVTHLSDFGIAKLLIREDHFMIQTQTL-ATIGYMASYV------------YSFGIML 323
D L+D+G+ K +R T T T Y+A + ++ G+++
Sbjct: 187 DSEGHIKLTDYGMCKEGLRPGD---TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLM 243
Query: 324 LEVFTRKKPTNKIFFSQRND 343
E+ + P + + S D
Sbjct: 244 FEMMAGRSPFDIVGSSDNPD 263
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG AKLL E+ I +MA
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 199
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 200 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 237
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 91/222 (40%), Gaps = 43/222 (19%)
Query: 158 FSEDNLISRGGFGSIHKARIQDRMEF-SVKGFHLQCSGAFKSFDFECDVMK----STCYR 212
F ++ +G FG + A + +F ++K L+ D EC +++ S +
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRVLSLAWE 77
Query: 213 N--LIKIISSRSNEDFKVLVLEYMPRGSL------------EKCLYSSNYVGFALEYLHF 258
+ L + + ++ V+EY+ G L + + + + L++LH
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH- 136
Query: 259 DYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV-- 316
S I++ DLK N+L D + ++DFG+ K + D + T Y+A +
Sbjct: 137 --SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD--AKTNEFCGTPDYIAPEILL 192
Query: 317 ----------YSFGIMLLEVFTRKKP-----TNKIFFSQRND 343
+SFG++L E+ + P ++F S R D
Sbjct: 193 GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD 234
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 24/144 (16%)
Query: 203 CDVMKSTCYRNLIKIISSRSNEDFKVL---VLEYMPRGSLEKCLYSSNYVGFALEYLHFD 259
D++K R + +N DFK L + +Y R + + L AL+Y H
Sbjct: 103 ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK-------ALDYCH-- 153
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIREDHFMIQTQTLATIG-------Y 311
S+ I+H D+KP NV+ D ++ L D+G+A+ + ++ + G
Sbjct: 154 -SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 212
Query: 312 MASY---VYSFGIMLLEVFTRKKP 332
M Y ++S G ML + RK+P
Sbjct: 213 MYDYSLDMWSLGCMLASMIFRKEP 236
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 82/206 (39%), Gaps = 44/206 (21%)
Query: 164 ISRGGFGSIHKARIQ------DRMEFSVKGFHLQCSGAFK-SFDFECDVMKSTCYRNLIK 216
+ G FG +++ ++ ++ +VK CS + F E ++ ++N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 217 IISSR-------------SNEDFKVLVLEYMPRGS------LEKCLYSSNYVGFALEYLH 257
I + D K + E PR S + L+ + + +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 258 FDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIAKLLIREDHF------MIQTQTLAT 308
++ IH D+ N L V + DFG+A+ + R ++ M+ + +
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 309 IGYMA------SYVYSFGIMLLEVFT 328
+M + +SFG++L E+F+
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG AKLL E+ I +MA
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 235
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 161
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 217
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 218 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQR 258
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 148
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 204
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 205 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 245
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 162
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 218
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 219 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQR 259
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 162
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 218
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 219 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQR 259
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFK--VLVLEYMPRG---------SLEKCLYSS 246
E +MK ++N+I +++ ++ E+F+ LV+E M E+ Y
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLL 132
Query: 247 NYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+ +++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 133 YQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 29/139 (20%)
Query: 229 LVLEYMPRGSL------------EKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLF 276
V+EY+ G L E + S + AL YLH II+ DLK NVL
Sbjct: 87 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLL 143
Query: 277 DDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV------------YSFGIMLL 324
D L+D+G+ K +R + T Y+A + ++ G+++
Sbjct: 144 DSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 201
Query: 325 EVFTRKKPTNKIFFSQRND 343
E+ + P + + S D
Sbjct: 202 EMMAGRSPFDIVGSSDNPD 220
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 24/144 (16%)
Query: 203 CDVMKSTCYRNLIKIISSRSNEDFKVL---VLEYMPRGSLEKCLYSSNYVGFALEYLHFD 259
D++K R + +N DFK L + +Y R + + L AL+Y H
Sbjct: 97 ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK-------ALDYCH-- 147
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIREDHFMIQTQTLATIG-------Y 311
S+ I+H D+KP NV+ D ++ L D+G+A+ + ++ + G
Sbjct: 148 -SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 206
Query: 312 MASY---VYSFGIMLLEVFTRKKP 332
M Y ++S G ML + RK+P
Sbjct: 207 MYDYSLDMWSLGCMLASMIFRKEP 230
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 24/144 (16%)
Query: 203 CDVMKSTCYRNLIKIISSRSNEDFKVL---VLEYMPRGSLEKCLYSSNYVGFALEYLHFD 259
D++K R + +N DFK L + +Y R + + L AL+Y H
Sbjct: 98 ADIVKDPVSRTPALVFEHVNNTDFKQLRQTLTDYDIRFYMYEILK-------ALDYCH-- 148
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIREDHFMIQTQTLATIG-------Y 311
S+ I+H D+KP NV+ D ++ L D+G+A+ + ++ + G
Sbjct: 149 -SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 312 MASY---VYSFGIMLLEVFTRKKP 332
M Y ++S G ML + RK+P
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------EKCLYSSNYVG 250
+ + E ++K + N+I + N+ +L+LE + G L ++ L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 251 FALEYL---HFDYSVLIIHYDLKPSNV-LFDDNIVT---HLSDFGIA 290
F + L ++ +S+ I H+DLKP N+ L D N+ + DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 24/144 (16%)
Query: 203 CDVMKSTCYRNLIKIISSRSNEDFKVL---VLEYMPRGSLEKCLYSSNYVGFALEYLHFD 259
D++K R + +N DFK L + +Y R + + L AL+Y H
Sbjct: 98 ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK-------ALDYCH-- 148
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIREDHFMIQTQTLATIG-------Y 311
S+ I+H D+KP NV+ D ++ L D+G+A+ + ++ + G
Sbjct: 149 -SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 312 MASY---VYSFGIMLLEVFTRKKP 332
M Y ++S G ML + RK+P
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 134
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 190
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 191 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 231
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 24/144 (16%)
Query: 203 CDVMKSTCYRNLIKIISSRSNEDFKVL---VLEYMPRGSLEKCLYSSNYVGFALEYLHFD 259
D++K R + +N DFK L + +Y R + + L AL+Y H
Sbjct: 97 ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK-------ALDYCH-- 147
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIREDHFMIQTQTLATIG-------Y 311
S+ I+H D+KP NV+ D ++ L D+G+A+ + ++ + G
Sbjct: 148 -SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 206
Query: 312 MASY---VYSFGIMLLEVFTRKKP 332
M Y ++S G ML + RK+P
Sbjct: 207 MYDYSLDMWSLGCMLASMIFRKEP 230
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 134
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 190
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 191 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 231
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 24/144 (16%)
Query: 203 CDVMKSTCYRNLIKIISSRSNEDFKVL---VLEYMPRGSLEKCLYSSNYVGFALEYLHFD 259
D++K R + +N DFK L + +Y R + + L AL+Y H
Sbjct: 98 ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK-------ALDYCH-- 148
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIREDHFMIQTQTLATIG-------Y 311
S+ I+H D+KP NV+ D ++ L D+G+A+ + ++ + G
Sbjct: 149 -SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 312 MASY---VYSFGIMLLEVFTRKKP 332
M Y ++S G ML + RK+P
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFK--VLVLEYMPRG---------SLEKCLYSS 246
E +MK ++N+I +++ +S E+F+ +V+E M E+ Y
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLL 132
Query: 247 NYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+ +++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 133 YQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 162
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 218
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 219 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQR 259
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 133
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 189
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 190 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 230
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNX 129
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 185
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 226
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 24/144 (16%)
Query: 203 CDVMKSTCYRNLIKIISSRSNEDFKVL---VLEYMPRGSLEKCLYSSNYVGFALEYLHFD 259
D++K R + +N DFK L + +Y R + + L AL+Y H
Sbjct: 98 ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK-------ALDYCH-- 148
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIREDHFMIQTQTLATIG-------Y 311
S+ I+H D+KP NV+ D ++ L D+G+A+ + ++ + G
Sbjct: 149 -SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 312 MASY---VYSFGIMLLEVFTRKKP 332
M Y ++S G ML + RK+P
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 29/139 (20%)
Query: 229 LVLEYMPRGSL------------EKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLF 276
V+EY+ G L E + S + AL YLH II+ DLK NVL
Sbjct: 98 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLL 154
Query: 277 DDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV------------YSFGIMLL 324
D L+D+G+ K +R + T Y+A + ++ G+++
Sbjct: 155 DSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 212
Query: 325 EVFTRKKPTNKIFFSQRND 343
E+ + P + + S D
Sbjct: 213 EMMAGRSPFDIVGSSDNPD 231
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 24/144 (16%)
Query: 203 CDVMKSTCYRNLIKIISSRSNEDFKVL---VLEYMPRGSLEKCLYSSNYVGFALEYLHFD 259
D++K R + +N DFK L + +Y R + + L AL+Y H
Sbjct: 98 ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK-------ALDYCH-- 148
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIREDHFMIQTQTLATIG-------Y 311
S+ I+H D+KP NV+ D ++ L D+G+A+ + ++ + G
Sbjct: 149 -SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 312 MASY---VYSFGIMLLEVFTRKKP 332
M Y ++S G ML + RK+P
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------EKCLYSSNYVGFALEY 255
E ++K + N+I + N+ +L+LE + G L ++ L F +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 256 L---HFDYSVLIIHYDLKPSNV-LFDDNIVT---HLSDFGIA 290
L ++ +S+ I H+DLKP N+ L D N+ + DFG+A
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 156
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 157 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 212
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 213 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 253
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFK--VLVLEY-----------MPRGSLEKCLYSSNY 248
E +++ ++N+I+++ NE+ + +V+EY +P C +
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 249 VGF--ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL 293
LEYLH S I+H D+KP N+L +S G+A+ L
Sbjct: 116 CQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 134
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 190
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 191 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 231
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 24/144 (16%)
Query: 203 CDVMKSTCYRNLIKIISSRSNEDFKVL---VLEYMPRGSLEKCLYSSNYVGFALEYLHFD 259
D++K R + +N DFK L + +Y R + + L AL+Y H
Sbjct: 98 ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK-------ALDYCH-- 148
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIREDHFMIQTQTLATIG-------Y 311
S+ I+H D+KP NV+ D ++ L D+G+A+ + ++ + G
Sbjct: 149 -SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 312 MASY---VYSFGIMLLEVFTRKKP 332
M Y ++S G ML + RK+P
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 129
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 185
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 226
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------EKCLYSSNYVGFALEY 255
E ++K + N+I + N+ +L+LE + G L ++ L F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 256 L---HFDYSVLIIHYDLKPSNV-LFDDNIVT---HLSDFGIA 290
L ++ +S+ I H+DLKP N+ L D N+ + DFG+A
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 13/98 (13%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA---------- 313
++H DL NVL ++DFG AKLL E+ I +MA
Sbjct: 142 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 201
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
S V+S+G+ + E+ T KP + I S+ + I G
Sbjct: 202 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 239
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------EKCLYSSNYVGFALEY 255
E ++K + N+I + N+ +L+LE + G L ++ L F +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 256 L---HFDYSVLIIHYDLKPSNV-LFDDNIVT---HLSDFGIA 290
L ++ +S+ I H+DLKP N+ L D N+ + DFG+A
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 129
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 185
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQR 226
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 24/144 (16%)
Query: 203 CDVMKSTCYRNLIKIISSRSNEDFKVL---VLEYMPRGSLEKCLYSSNYVGFALEYLHFD 259
D++K R + +N DFK L + +Y R + + L AL+Y H
Sbjct: 96 ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK-------ALDYCH-- 146
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIREDHFMIQTQTLATIG-------Y 311
S+ I+H D+KP NV+ D ++ L D+G+A+ + ++ + G
Sbjct: 147 -SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 205
Query: 312 MASY---VYSFGIMLLEVFTRKKP 332
M Y ++S G ML + RK+P
Sbjct: 206 MYDYSLDMWSLGCMLASMIFRKEP 229
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------EKCLYSSNYVGFALEY 255
E ++K + N+I + N+ +L+LE + G L ++ L F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 256 L---HFDYSVLIIHYDLKPSNV-LFDDNIVT---HLSDFGIA 290
L ++ +S+ I H+DLKP N+ L D N+ + DFG+A
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------EKCLYSSNYVGFALEY 255
E ++K + N+I + N+ +L+LE + G L ++ L F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 256 L---HFDYSVLIIHYDLKPSNV-LFDDNIVT---HLSDFGIA 290
L ++ +S+ I H+DLKP N+ L D N+ + DFG+A
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 29/139 (20%)
Query: 229 LVLEYMPRGSL------------EKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLF 276
V+EY+ G L E + S + AL YLH II+ DLK NVL
Sbjct: 83 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLL 139
Query: 277 DDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV------------YSFGIMLL 324
D L+D+G+ K +R + T Y+A + ++ G+++
Sbjct: 140 DSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 197
Query: 325 EVFTRKKPTNKIFFSQRND 343
E+ + P + + S D
Sbjct: 198 EMMAGRSPFDIVGSSDNPD 216
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 140 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 176
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 24/144 (16%)
Query: 203 CDVMKSTCYRNLIKIISSRSNEDFKVL---VLEYMPRGSLEKCLYSSNYVGFALEYLHFD 259
D++K R + +N DFK L + +Y R + + L AL+Y H
Sbjct: 98 ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK-------ALDYCH-- 148
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIREDHFMIQTQTLATIG-------Y 311
S+ I+H D+KP NV+ D ++ L D+G+A+ + ++ + G
Sbjct: 149 -SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 312 MASY---VYSFGIMLLEVFTRKKP 332
M Y ++S G ML + RK+P
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 24/144 (16%)
Query: 203 CDVMKSTCYRNLIKIISSRSNEDFKVL---VLEYMPRGSLEKCLYSSNYVGFALEYLHFD 259
D++K R + +N DFK L + +Y R + + L AL+Y H
Sbjct: 98 ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK-------ALDYCH-- 148
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIREDHFMIQTQTLATIG-------Y 311
S+ I+H D+KP NV+ D ++ L D+G+A+ + ++ + G
Sbjct: 149 -SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 312 MASY---VYSFGIMLLEVFTRKKP 332
M Y ++S G ML + RK+P
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFK--VLVLEYMPRG---------SLEKCLYSS 246
E +MK ++N+I +++ +S E+F+ +V+E M E+ Y
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLL 132
Query: 247 NYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+ +++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 133 YQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 55 ENLSLASNELISVI-PSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFA 113
E L L+ N + V+ P+TF L + L+L L P L L +Y NN
Sbjct: 82 EQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQ 141
Query: 114 GVIPNAIGCLNILQHLFLGYNRL 136
+ N L L HLFL NR+
Sbjct: 142 ALPDNTFRDLGNLTHLFLHGNRI 164
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------EKCLYSSNYVGFALEY 255
E ++K + N+I + N+ +L+LE + G L ++ L F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 256 L---HFDYSVLIIHYDLKPSNV-LFDDNIVT---HLSDFGIA 290
L ++ +S+ I H+DLKP N+ L D N+ + DFG+A
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------EKCLYSSNYVG 250
+ + E ++K + N+I + N+ +L+LE + G L ++ L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 251 FALEYL---HFDYSVLIIHYDLKPSNV-LFDDNIVT---HLSDFGIA 290
F + L ++ +S+ I H+DLKP N+ L D N+ + DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------EKCLYSSNYVGFALEY 255
E ++K + N+I + N+ +L+LE + G L ++ L F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 256 L---HFDYSVLIIHYDLKPSNV-LFDDNIVT---HLSDFGIA 290
L ++ +S+ I H+DLKP N+ L D N+ + DFG+A
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------EKCLYSSNYVGFALEY 255
E ++K + N+I + N+ +L+LE + G L ++ L F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 256 L---HFDYSVLIIHYDLKPSNV-LFDDNIVT---HLSDFGIA 290
L ++ +S+ I H+DLKP N+ L D N+ + DFG+A
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------EKCLYSSNYVGFALEY 255
E ++K + N+I + N+ +L+LE + G L ++ L F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 256 L---HFDYSVLIIHYDLKPSNV-LFDDNIVT---HLSDFGIA 290
L ++ +S+ I H+DLKP N+ L D N+ + DFG+A
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFK--VLVLEYMPRG---------SLEKCLYSS 246
E +MK ++N+I +++ +S E+F+ +V+E M E+ Y
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLL 132
Query: 247 NYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+ +++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 133 YQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------EKCLYSSNYVG 250
+ + E ++K + N+I + N+ +L+LE + G L ++ L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 251 FALEYL---HFDYSVLIIHYDLKPSNV-LFDDNIVT---HLSDFGIA 290
F + L ++ +S+ I H+DLKP N+ L D N+ + DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------EKCLYSSNYVG 250
+ + E ++K + N+I + N+ +L+LE + G L ++ L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 251 FALEYL---HFDYSVLIIHYDLKPSNV-LFDDNIVT---HLSDFGIA 290
F + L ++ +S+ I H+DLKP N+ L D N+ + DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFK--VLVLEYMPRG---------SLEKCLYSS 246
E +MK ++N+I +++ ++ E+F+ LV+E M E+ Y
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLL 125
Query: 247 NYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+ +++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 126 YQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 167
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 163 LISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFD------FECDVMK--STCYRN 213
L+ GGFGS++ R+ D + ++K + E ++K S+ +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 214 LIKIISSRSNEDFKVLVLEY-----------MPRGSLEKCLYSSNYVGFALEYLHFDYSV 262
+I+++ D VL+LE RG+L++ L S + LE + ++
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS-FFWQVLEAVRHCHNC 132
Query: 263 LIIHYDLKPSNVLFDDNIVT-HLSDFGIAKLLIREDHFMIQTQTLATIGY---------- 311
++H D+K N+L D N L DFG LL + T T Y
Sbjct: 133 GVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHR 188
Query: 312 ---MASYVYSFGIMLLEVFTRKKP--------TNKIFFSQR 341
++ V+S GI+L ++ P ++FF QR
Sbjct: 189 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 229
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 24/144 (16%)
Query: 203 CDVMKSTCYRNLIKIISSRSNEDFKVL---VLEYMPRGSLEKCLYSSNYVGFALEYLHFD 259
D++K R + +N DFK L + +Y R + + L AL+Y H
Sbjct: 98 ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILK-------ALDYCH-- 148
Query: 260 YSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLLIREDHFMIQTQTLATIG-------Y 311
S+ I+H D+KP NV+ D ++ L D+G+A+ + ++ + G
Sbjct: 149 -SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 312 MASY---VYSFGIMLLEVFTRKKP 332
M Y ++S G ML + RK+P
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFK--VLVLEYMPRG---------SLEKCLYSS 246
E +MK ++N+I +++ ++ E+F+ LV+E M E+ Y
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLL 132
Query: 247 NYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+ +++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 133 YQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 245 SSNYVGFALEYLHFDYSVLIIHYDLKPSNVLF---DDNIVTHLSDFGIA 290
+S+Y+ LE L + + IIH D+KP NVL +++ L DFG+A
Sbjct: 132 ASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA 180
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 11/84 (13%)
Query: 251 FALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGI--------AKLLIREDHFMIQ 302
AL +LH S ++H D+KP+N+ L DFG+ A + D +
Sbjct: 168 LALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMA 224
Query: 303 TQTLATIGYMASYVYSFGIMLLEV 326
+ L A+ V+S G+ +LEV
Sbjct: 225 PELLQGSYGTAADVFSLGLTILEV 248
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + D+G+A+ E
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE--------- 178
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 179 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 210
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 20/143 (13%)
Query: 164 ISRGGFGSIHKAR-IQDRMEFSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIIS 219
I +G F + AR I E +VK L S K F E + K + N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLFE 80
Query: 220 SRSNEDFKVLVLEYMPRGSL------------EKCLYSSNYVGFALEYLHFDYSVLIIHY 267
E LV EY G + ++ + A++Y H + I+H
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF---IVHR 137
Query: 268 DLKPSNVLFDDNIVTHLSDFGIA 290
DLK N+L D + ++DFG +
Sbjct: 138 DLKAENLLLDADXNIKIADFGFS 160
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 143 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 179
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 163 LISRGGFGSIHKARIQDRME-FSVKGFHLQCSGAFKSFDFECDVMKS---TCYRN---LI 215
++ +G FG + AR+++ + ++VK L+ + D EC + + + RN L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVK--VLKKDVILQDDDVECTMTEKRILSLARNHPFLT 87
Query: 216 KIISSRSNEDFKVLVLEYMPRGSLEKCLYSSN---------YVGFALEYLHFDYSVLIIH 266
++ D V+E++ G L + S Y + L F + II+
Sbjct: 88 QLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIY 147
Query: 267 YDLKPSNVLFDDNIVTHLSDFGIAK 291
DLK NVL D L+DFG+ K
Sbjct: 148 RDLKLDNVLLDHEGHCKLADFGMCK 172
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFK--VLVLEYMPRG---------SLEKCLYSS 246
E +MK ++N+I +++ ++ E+F+ LV+E M E+ Y
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLL 132
Query: 247 NYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+ +++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 133 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 137 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 173
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 92/220 (41%), Gaps = 49/220 (22%)
Query: 163 LISRGGFGSIHKARIQDRMEF-SVKGFHLQCSGAFKSFDFECDVMK----STCYRN--LI 215
++ +G FG + A + +F ++K L+ D EC +++ S + + L
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRVLSLAWEHPFLT 81
Query: 216 KIISSRSNEDFKVLVLEYMPRGSL------------EKCLYSSNYVGFALEYLHFDYSVL 263
+ + ++ V+EY+ G L + + + + L++LH S
Sbjct: 82 HMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKG 138
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT---LATIGYMASYV---- 316
I++ DLK N+L D + ++DFG+ K ++ + +T T Y+A +
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCK-----ENMLGDAKTNXFCGTPDYIAPEILLGQ 193
Query: 317 --------YSFGIMLLEVFTRKKP-----TNKIFFSQRND 343
+SFG++L E+ + P ++F S R D
Sbjct: 194 KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD 233
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 131 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 136 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 172
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+++LH S IIH DLKPSN++ + + DFG+A+
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 20/147 (13%)
Query: 164 ISRGGFG-SIHKARIQDRMEFSVKGFHLQ--CSGAFKSFDFECDVMKSTCYRNLIKIISS 220
I G FG +I +D ++ +K ++ S + E V+ + + N+++ S
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 221 RSNEDFKVLVLEYMPRGSLEKCLYSSNYVGF--------------ALEYLHFDYSVLIIH 266
+V++Y G L K + + V F AL+++H I+H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILH 148
Query: 267 YDLKPSNVLFDDNIVTHLSDFGIAKLL 293
D+K N+ + L DFGIA++L
Sbjct: 149 RDIKSQNIFLTKDGTVQLGDFGIARVL 175
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 227 KVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSD 286
K++ +E+ S EK Y + L+Y+H S ++H DLKP N+ +++ + D
Sbjct: 135 KIMGMEF----SEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILD 187
Query: 287 FGIAK 291
FG+A+
Sbjct: 188 FGLAR 192
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 213 NLIKIISSRSNEDFKVLVLEYMP-------RGSLEKCLYSSNYVGFALEYLHFDYSVLII 265
NL+ ++ + ++ D LV +YM R ++ + ++ V ++ + + +S ++
Sbjct: 73 NLLNVLRADNDRDV-YLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLL 131
Query: 266 HYDLKPSNVLFDDNIVTHLSDFGIAK 291
H D+KPSN+L + ++DFG+++
Sbjct: 132 HRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 68/149 (45%), Gaps = 18/149 (12%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSS--NYVGFA------L 253
E +M+ + N++++ +S D +V+E++ G+L + + N A L
Sbjct: 121 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL 180
Query: 254 EYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE---------DHFMIQTQ 304
+ L ++ +IH D+K ++L + LSDFG + +E + + +
Sbjct: 181 QALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 240
Query: 305 TLATIGYMASY-VYSFGIMLLEVFTRKKP 332
++ + Y ++S GIM++E+ + P
Sbjct: 241 LISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 85/196 (43%), Gaps = 31/196 (15%)
Query: 162 NLISRGGFGSIHKARIQDRME-----FSVKGFHLQCSGAFKSFDF--ECDVMKSTCYRNL 214
++ G FG+++K E ++K + + +G + +F E +M S + +L
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN-ETTGPKANVEFMDEALIMASMDHPHL 102
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYS-SNYVGFAL---------EYLHFDYSVLI 264
++++ + + LV + MP G L + ++ + +G L + + + +
Sbjct: 103 VRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRL 161
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA----------- 313
+H DL NVL ++DFG+A+LL ++ I +MA
Sbjct: 162 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTH 221
Query: 314 -SYVYSFGIMLLEVFT 328
S V+S+G+ + E+ T
Sbjct: 222 QSDVWSYGVTIWELMT 237
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFD-DNIVTHLSDFGIAKLL 293
L+Y+H S ++H DLKP+N+ + +++V + DFG+A+++
Sbjct: 132 GLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIM 171
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLL 293
++Y+H S I+H DLKP+N L + + + DFG+A+ +
Sbjct: 168 GVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNYVGFA---- 252
+ + E + + + N++++ S S E L+ + + G L + + + Y A
Sbjct: 66 QKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH 125
Query: 253 -----LEYLHFDYSVLIIHYDLKPSNVLFDDNI---VTHLSDFGIA 290
LE + + + ++H DLKP N+L + L+DFG+A
Sbjct: 126 CIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA 171
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------------EKCLY 244
+ E + +S +++++ + DF +VLE R SL + Y
Sbjct: 60 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 119
Query: 245 SSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIA 290
+ +YLH + +IH DLK N+ ++++ + DFG+A
Sbjct: 120 YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA 162
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 74/165 (44%), Gaps = 15/165 (9%)
Query: 163 LISRGGFGSIHKARIQDRME-FSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKII 218
+I RG FG + ++++ +++K + + F E DV+ + + + +
Sbjct: 97 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALH 156
Query: 219 SSRSNEDFKVLVLEYMPRGSLEKCL----------YSSNYVGFALEYLHFDYSVLIIHYD 268
+ +E+ LV++Y G L L + Y+G + + + + +H D
Sbjct: 157 YAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRD 216
Query: 269 LKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA 313
+KP NVL D N L+DFG + L + +D + + + T Y++
Sbjct: 217 IKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYIS 260
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------------EKCLY 244
+ E + +S +++++ + DF +VLE R SL + Y
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 121
Query: 245 SSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIA 290
+ +YLH + +IH DLK N+ ++++ + DFG+A
Sbjct: 122 YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 95/224 (42%), Gaps = 27/224 (12%)
Query: 134 NRLQGSISYSKWFSCLELCRVTNGFSE---DNLISRG----GFGSIHKARIQDRMEFSVK 186
R +S+ ++ + L+L V G DN I G G I R ++ +VK
Sbjct: 3 QREPQRVSHEQFRAALQLV-VDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKL-VAVK 60
Query: 187 GFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSS 246
L+ + E +M+ + N++++ +S D +V+E++ G+L + +
Sbjct: 61 KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT 120
Query: 247 NY-------VGFA-LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE-- 296
V A L+ L ++ +IH D+K ++L + LSDFG + +E
Sbjct: 121 RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 180
Query: 297 -------DHFMIQTQTLATIGYMASY-VYSFGIMLLEVFTRKKP 332
+ + + ++ + Y ++S GIM++E+ + P
Sbjct: 181 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------------EKCLY 244
+ E + +S +++++ + DF +VLE R SL + Y
Sbjct: 66 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 125
Query: 245 SSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIA 290
+ +YLH + +IH DLK N+ ++++ + DFG+A
Sbjct: 126 YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA 168
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------------EKCLY 244
+ E + +S +++++ + DF +VLE R SL + Y
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 121
Query: 245 SSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIA 290
+ +YLH + +IH DLK N+ ++++ + DFG+A
Sbjct: 122 YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 75/169 (44%), Gaps = 15/169 (8%)
Query: 162 NLISRGGFGSIHKARIQDRME-FSVK---GFHLQCSGAFKSFDFECDVMKSTCYRNLIKI 217
+I RG FG + ++++ +++K + + F E DV+ + + + +
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 139
Query: 218 ISSRSNEDFKVLVLEYMPRGSLEKCL----------YSSNYVGFALEYLHFDYSVLIIHY 267
+ +E+ LV++Y G L L + Y+G + + + + +H
Sbjct: 140 HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHR 199
Query: 268 DLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV 316
D+KP NVL D N L+DFG + L + +D + + + T Y++ +
Sbjct: 200 DIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEI 247
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 68/149 (45%), Gaps = 18/149 (12%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------VGFA-L 253
E +M+ + N++++ +S D +V+E++ G+L + + V A L
Sbjct: 71 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL 130
Query: 254 EYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE---------DHFMIQTQ 304
+ L ++ +IH D+K ++L + LSDFG + +E + + +
Sbjct: 131 QALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 190
Query: 305 TLATIGYMASY-VYSFGIMLLEVFTRKKP 332
++ + Y ++S GIM++E+ + P
Sbjct: 191 LISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 68/149 (45%), Gaps = 18/149 (12%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSS--NYVGFA------L 253
E +M+ + N++++ +S D +V+E++ G+L + + N A L
Sbjct: 198 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL 257
Query: 254 EYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE---------DHFMIQTQ 304
+ L ++ +IH D+K ++L + LSDFG + +E + + +
Sbjct: 258 QALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 317
Query: 305 TLATIGYMASY-VYSFGIMLLEVFTRKKP 332
++ + Y ++S GIM++E+ + P
Sbjct: 318 LISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------------EKCLY 244
+ E + +S +++++ + DF +VLE R SL + Y
Sbjct: 86 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 145
Query: 245 SSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIA 290
+ +YLH + +IH DLK N+ ++++ + DFG+A
Sbjct: 146 YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA 188
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 197 KSFDFECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------------EKCLY 244
+ E + +S +++++ + DF +VLE R SL + Y
Sbjct: 84 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 143
Query: 245 SSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIA 290
+ +YLH + +IH DLK N+ ++++ + DFG+A
Sbjct: 144 YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA 186
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 68/149 (45%), Gaps = 18/149 (12%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------VGFA-L 253
E +M+ + N++++ +S D +V+E++ G+L + + V A L
Sbjct: 78 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL 137
Query: 254 EYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE---------DHFMIQTQ 304
+ L ++ +IH D+K ++L + LSDFG + +E + + +
Sbjct: 138 QALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 197
Query: 305 TLATIGYMASY-VYSFGIMLLEVFTRKKP 332
++ + Y ++S GIM++E+ + P
Sbjct: 198 LISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 68/149 (45%), Gaps = 18/149 (12%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSSNY-------VGFA-L 253
E +M+ + N++++ +S D +V+E++ G+L + + V A L
Sbjct: 67 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL 126
Query: 254 EYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE---------DHFMIQTQ 304
+ L ++ +IH D+K ++L + LSDFG + +E + + +
Sbjct: 127 QALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 186
Query: 305 TLATIGYMASY-VYSFGIMLLEVFTRKKP 332
++ + Y ++S GIM++E+ + P
Sbjct: 187 LISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 14/111 (12%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL-----EKCLYSSNYVGF----- 251
E V++++ + L + S D V+EY G L + ++S + F
Sbjct: 198 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 257
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFM 300
AL+YLH + +V ++ DLK N++ D + ++DFG+ K I++ M
Sbjct: 258 VSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 306
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------------EKCLYSSNYV 249
E V+++T + L + + D V+EY G L E+ + +
Sbjct: 58 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 117
Query: 250 GFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
ALEYLH S +++ D+K N++ D + ++DFG+ K
Sbjct: 118 VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 156
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------------EKCLYSSNYV 249
E V+++T + L + + D V+EY G L E+ + +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 114
Query: 250 GFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
ALEYLH S +++ D+K N++ D + ++DFG+ K
Sbjct: 115 VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 14/111 (12%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL-----EKCLYSSNYVGF----- 251
E V++++ + L + S D V+EY G L + ++S + F
Sbjct: 201 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 260
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFM 300
AL+YLH + +V ++ DLK N++ D + ++DFG+ K I++ M
Sbjct: 261 VSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 309
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------------EKCLYSSNYV 249
E V+++T + L + + D V+EY G L E+ + +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 114
Query: 250 GFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
ALEYLH S +++ D+K N++ D + ++DFG+ K
Sbjct: 115 VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------------EKCLYSSNYV 249
E V+++T + L + + D V+EY G L E+ + +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 114
Query: 250 GFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
ALEYLH S +++ D+K N++ D + ++DFG+ K
Sbjct: 115 VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 28/205 (13%)
Query: 162 NLISRGGFGSIHKA-RIQDRMEFSVKGFHLQCSGAFKSFDFECDVM-KSTCYRNLIKIIS 219
L+ G + + A +Q+ E++VK Q + E + + + +N++++I
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 220 SRSNEDFKVLVLEYMPRGSLEKCLYSSNY------------VGFALEYLHFDYSVLIIHY 267
++ LV E + GS+ + + V AL++LH + I H
Sbjct: 79 FFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLH---TKGIAHR 135
Query: 268 DLKPSNVLFDDN---IVTHLSDFGIAK-LLIREDHFMIQTQTLATIGYMASYVYSFGIML 323
DLKP N+L + + DF + + + I T L T A Y+ +
Sbjct: 136 DLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYM---APEV 192
Query: 324 LEVFTRKKPTNKIFFSQRNDIKALG 348
+EVFT F+ +R D+ +LG
Sbjct: 193 VEVFT----DQATFYDKRCDLWSLG 213
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 24/125 (19%)
Query: 225 DFKVLVLEYMPRGS------LEKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLF-- 276
D K + E PR S + L+ + + +YL ++ IH D+ N L
Sbjct: 134 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC 190
Query: 277 -DDNIVTHLSDFGIAKLLIREDHF------MIQTQTLATIGYMA------SYVYSFGIML 323
V + DFG+A+ + R ++ M+ + + +M + +SFG++L
Sbjct: 191 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 250
Query: 324 LEVFT 328
E+F+
Sbjct: 251 WEIFS 255
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------------EKCLYSSNYV 249
E V+++T + L + + D V+EY G L E+ + +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 114
Query: 250 GFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
ALEYLH S +++ D+K N++ D + ++DFG+ K
Sbjct: 115 VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------------EKCLYSSNYV 249
E V+++T + L + + D V+EY G L E+ + +
Sbjct: 60 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 119
Query: 250 GFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
ALEYLH S +++ D+K N++ D + ++DFG+ K
Sbjct: 120 VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 158
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 67/140 (47%), Gaps = 13/140 (9%)
Query: 164 ISRGGFGSIHK--ARIQDRMEFSVKGFHLQCS-GAFKSFDFECDVMKSTCYRNLIKIISS 220
+ G + +++K +++ D + ++K L+ GA + E ++K + N++ +
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 221 RSNEDFKVLVLEYMPRG---SLEKC-----LYSSNYVGFAL-EYLHFDYSVLIIHYDLKP 271
E LV EY+ + L+ C +++ F L L + + ++H DLKP
Sbjct: 69 IHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKP 128
Query: 272 SNVLFDDNIVTHLSDFGIAK 291
N+L ++ L+DFG+A+
Sbjct: 129 QNLLINERGELKLADFGLAR 148
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 238 SLEKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
S EK Y + L+Y+H S ++H DLKP N+ +++ + DFG+A+
Sbjct: 124 SEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR 174
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 63/157 (40%), Gaps = 17/157 (10%)
Query: 164 ISRGGFGSIHKARIQDRM---EFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISS 220
+ G FG +H R+ +R F+ K ++ E M + L+ + +
Sbjct: 165 LGTGAFGVVH--RVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 221 RSNEDFKVLVLEYMPRGSL-EKCLYSSNYVGF--ALEYLHFDYSVLI-------IHYDLK 270
+++ V++ E+M G L EK N + A+EY+ L +H DLK
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLK 282
Query: 271 PSNVLFDDNIVTHLS--DFGIAKLLIREDHFMIQTQT 305
P N++F L DFG+ L + + T T
Sbjct: 283 PENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGT 319
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDF-KVLVLEYMPRGSLEKCLYS----SNYVGF- 251
E ++K + N+I ++ +RS E+F V ++ ++ L + S ++V F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL 130
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + DFG+ + E
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE--------- 178
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 179 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 210
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 15/102 (14%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------------EKCLYSSNYV 249
E V+++T + L + + D V+EY G L E+ + +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 114
Query: 250 GFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
ALEYLH S +++ D+K N++ D + ++DFG+ K
Sbjct: 115 VSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLL 293
IIH DLKP+N L + + + DFG+A+ +
Sbjct: 152 IIHRDLKPANCLLNQDCSVKICDFGLARTI 181
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 217 IISSRSNEDFKVLVLEYMPRGSLEKCLYS-------------SNYVGFALEYLHFDYSVL 263
+I + S + +++EY+P +L K L S S Y+ + F +S+
Sbjct: 103 VIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG 161
Query: 264 IIHYDLKPSNVLFD--DNIVTHLSDFGIAKLLI 294
I H D+KP N+L + DN + L DFG AK LI
Sbjct: 162 ICHRDIKPQNLLVNSKDNTLK-LCDFGSAKKLI 193
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 16/88 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGY 311
AL YL S +H D+ NVL N L DFG+++ + ++ L I +
Sbjct: 128 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKW 183
Query: 312 M------------ASYVYSFGIMLLEVF 327
M AS V+ FG+ + E+
Sbjct: 184 MAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 12/116 (10%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSLEKCLYSS----------NYVGF 251
E +M + LI + + ++ VL+LE++ G L + + NY+
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ 157
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLS--DFGIAKLLIREDHFMIQTQT 305
A E L + I+H D+KP N++ + + + DFG+A L ++ + T T
Sbjct: 158 ACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTAT 213
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 19/155 (12%)
Query: 167 GGFGSIHKARIQDRM---EFSVKGFHLQCSGAFKSFDFECDVMKSTCYRNLIKIISSRSN 223
G FG +H R+ +R F+ K ++ E M + L+ + + +
Sbjct: 62 GAFGVVH--RVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED 119
Query: 224 EDFKVLVLEYMPRGSL-EKCLYSSNYVGF--ALEYL--------HFDYSVLIIHYDLKPS 272
++ V++ E+M G L EK N + A+EY+ H + +H DLKP
Sbjct: 120 DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM-HENNYVHLDLKPE 178
Query: 273 NVLFDDNIVTHLS--DFGIAKLLIREDHFMIQTQT 305
N++F L DFG+ L + + T T
Sbjct: 179 NIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGT 213
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 85/196 (43%), Gaps = 31/196 (15%)
Query: 162 NLISRGGFGSIHKARIQDRME-----FSVKGFHLQCSGAFKSFDF--ECDVMKSTCYRNL 214
++ G FG+++K E ++K + + +G + +F E +M S + +L
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN-ETTGPKANVEFMDEALIMASMDHPHL 79
Query: 215 IKIISSRSNEDFKVLVLEYMPRGSLEKCLYS-SNYVGFAL---------EYLHFDYSVLI 264
++++ + + LV + MP G L + ++ + +G L + + + +
Sbjct: 80 VRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRL 138
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMA----------- 313
+H DL NVL ++DFG+A+LL ++ I +MA
Sbjct: 139 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTH 198
Query: 314 -SYVYSFGIMLLEVFT 328
S V+S+G+ + E+ T
Sbjct: 199 QSDVWSYGVTIWELMT 214
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 16/88 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGY 311
AL YL S +H D+ NVL N L DFG+++ + ++ L I +
Sbjct: 126 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKW 181
Query: 312 M------------ASYVYSFGIMLLEVF 327
M AS V+ FG+ + E+
Sbjct: 182 MAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRE 296
IIH DLKP+N L + + + DFG+A+ + E
Sbjct: 150 IIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 16/88 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGY 311
AL YL S +H D+ NVL N L DFG+++ + ++ L I +
Sbjct: 125 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKW 180
Query: 312 M------------ASYVYSFGIMLLEVF 327
M AS V+ FG+ + E+
Sbjct: 181 MAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
L Y+H + IIH DLKP N+ +++ + DFG+A+
Sbjct: 140 GLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + D G+A+ E
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE--------- 178
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 179 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 210
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + FG+A+ E
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE--------- 178
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 179 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 210
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 16/113 (14%)
Query: 249 VGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLAT 308
+ + YL V ++H DL NVL ++DFG+A+LL ++
Sbjct: 128 IAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVP 184
Query: 309 IGYMA------------SYVYSFGIMLLEVFT-RKKPTNKIFFSQRNDIKALG 348
I +MA S V+S+G+ + E+ T KP + I + D+ G
Sbjct: 185 IKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKG 237
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 253 LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
L L++ + I+H D+K +NVL + V L+DFG+A+
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 16/88 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGY 311
AL YL S +H D+ NVL N L DFG+++ + ++ L I +
Sbjct: 123 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKW 178
Query: 312 M------------ASYVYSFGIMLLEVF 327
M AS V+ FG+ + E+
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 14/111 (12%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL-----EKCLYSSNYVGF----- 251
E V++++ + L + S D V+EY G L + ++S + F
Sbjct: 58 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 117
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFM 300
AL+YLH + +V ++ DLK N++ D + ++DFG+ K I++ M
Sbjct: 118 VSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 166
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 26/99 (26%)
Query: 210 CYRNLIKIISSR--SNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHY 267
C NL ++ S+ S+E+ K L EY P L + + + +LH S+ IIH
Sbjct: 109 CNLNLQDLVESKNVSDENLK-LQKEYNPISLLRQ-------IASGVAHLH---SLKIIHR 157
Query: 268 DLKPSNVLFD-------------DNIVTHLSDFGIAKLL 293
DLKP N+L +N+ +SDFG+ K L
Sbjct: 158 DLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 264 IIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIR 295
+IH D+K NVL +N L DFG++ L R
Sbjct: 150 VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 181
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 16/88 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGY 311
AL YL S +H D+ NVL N L DFG+++ + ++ L I +
Sbjct: 123 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKW 178
Query: 312 M------------ASYVYSFGIMLLEVF 327
M AS V+ FG+ + E+
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 26/99 (26%)
Query: 210 CYRNLIKIISSR--SNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHY 267
C NL ++ S+ S+E+ K L EY P L + + + +LH S+ IIH
Sbjct: 109 CNLNLQDLVESKNVSDENLK-LQKEYNPISLLRQ-------IASGVAHLH---SLKIIHR 157
Query: 268 DLKPSNVLFD-------------DNIVTHLSDFGIAKLL 293
DLKP N+L +N+ +SDFG+ K L
Sbjct: 158 DLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 16/88 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGY 311
AL YL S +H D+ NVL N L DFG+++ + ++ L I +
Sbjct: 151 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKW 206
Query: 312 M------------ASYVYSFGIMLLEVF 327
M AS V+ FG+ + E+
Sbjct: 207 MAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 14/111 (12%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL-----EKCLYSSNYVGF----- 251
E V++++ + L + S D V+EY G L + ++S + F
Sbjct: 59 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 118
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFM 300
AL+YLH + +V ++ DLK N++ D + ++DFG+ K I++ M
Sbjct: 119 VSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 167
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 16/88 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGY 311
AL YL S +H D+ NVL N L DFG+++ + ++ L I +
Sbjct: 120 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKW 175
Query: 312 M------------ASYVYSFGIMLLEVF 327
M AS V+ FG+ + E+
Sbjct: 176 MAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGYMASYV 316
+H D+KP N+L D N L+DFG + L + ED + + + T Y++ +
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEI 247
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 73/161 (45%), Gaps = 27/161 (16%)
Query: 151 LCRVTNGFSED--NLISRGGFGSIHKARIQDRMEFSVKGFHLQCSGAFKSFDFECDVMKS 208
LC+ NG SE +I + F K R D + +++ FH + E ++KS
Sbjct: 54 LCKEKNGHSEKAIKVIKKSQF---DKGRYSDDNK-NIEKFHEEIYN-------EISLLKS 102
Query: 209 TCYRNLIKIISSRSNEDFKVLVLEYMPRGSL----------EKCLYSSNYVGFALEYLHF 258
+ N+IK+ ++ + LV E+ G L ++C ++N + L + +
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDEC-DAANIMKQILSGICY 161
Query: 259 DYSVLIIHYDLKPSNVLFDDN---IVTHLSDFGIAKLLIRE 296
+ I+H D+KP N+L ++ + + DFG++ ++
Sbjct: 162 LHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD 202
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 26/99 (26%)
Query: 210 CYRNLIKIISSR--SNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHY 267
C NL ++ S+ S+E+ K L EY P L + + + +LH S+ IIH
Sbjct: 91 CNLNLQDLVESKNVSDENLK-LQKEYNPISLLRQ-------IASGVAHLH---SLKIIHR 139
Query: 268 DLKPSNVLFD-------------DNIVTHLSDFGIAKLL 293
DLKP N+L +N+ +SDFG+ K L
Sbjct: 140 DLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 14/111 (12%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL-----EKCLYSSNYVGF----- 251
E V++++ + L + S D V+EY G L + ++S + F
Sbjct: 60 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 119
Query: 252 --ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFM 300
AL+YLH + +V ++ DLK N++ D + ++DFG+ K I++ M
Sbjct: 120 VSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 168
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + D G+A+ E
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE--------- 178
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 179 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 210
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 253 LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
L L++ + I+H D+K +NVL + V L+DFG+A+
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 26/99 (26%)
Query: 210 CYRNLIKIISSR--SNEDFKVLVLEYMPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHY 267
C NL ++ S+ S+E+ K L EY P L + + + +LH S+ IIH
Sbjct: 91 CNLNLQDLVESKNVSDENLK-LQKEYNPISLLRQ-------IASGVAHLH---SLKIIHR 139
Query: 268 DLKPSNVLFD-------------DNIVTHLSDFGIAKLL 293
DLKP N+L +N+ +SDFG+ K L
Sbjct: 140 DLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 35/204 (17%)
Query: 169 FGSIHKARIQD------RMEFSVKGFHLQCSGAFKSFDFECDVMKSTC--YRNLIKIISS 220
G AR+Q E++VK Q G +S F M C +RN++++I
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQ-PGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 221 RSNEDFKVLVLEYMPRGSLEKCLYSSNY------------VGFALEYLHFDYSVLIIHYD 268
ED LV E M GS+ ++ + V AL++LH + I H D
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLH---NKGIAHRD 136
Query: 269 LKPSNVLFD-DNIVT--HLSDFGIAK-LLIREDHFMIQTQTLATIGYMASYVYSFGIMLL 324
LKP N+L + N V+ + DFG+ + + D I T L T A Y+ ++
Sbjct: 137 LKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAP---EVV 193
Query: 325 EVFTRKKPTNKIFFSQRNDIKALG 348
E F+ + + +R D+ +LG
Sbjct: 194 EAFSEEAS----IYDKRCDLWSLG 213
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 34/167 (20%)
Query: 152 CRVTNGFSEDNLISRGGFGSIHKARIQDR----------MEFSVKGFHLQCSGAFKSFDF 201
C + + + I +G FG + KAR + ME +GF + K
Sbjct: 13 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ- 71
Query: 202 ECDVMKSTCYRNLIKIISSRSN-----------------EDFKVLVLEYMPRGSLEKCLY 244
++K NLI+I ++++ D L+ + + +L +
Sbjct: 72 ---LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 128
Query: 245 SSNYVGFALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
+ L Y+H + I+H D+K +NVL + V L+DFG+A+
Sbjct: 129 VMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 39/163 (23%)
Query: 202 ECDVMKSTCYRNLIKIIS----SRSNEDFKVLVLEYMPRGS----LEKCL-YSSNYVGF- 251
E ++K + N+I ++ +RS E+F + L G+ + KC + ++V F
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 252 ------ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQT 305
L+Y+H S IIH DLKPSN+ +++ + D G+A+ E
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE--------- 178
Query: 306 LATIGYMASYVYSFGIMLLEVFTRKKPTNKIFFSQRNDIKALG 348
GY+A+ Y ++L N + ++Q DI ++G
Sbjct: 179 --MTGYVATRWYRAPEIML---------NWMHYNQTVDIWSVG 210
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 253 LEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAK 291
L L++ + I+H D+K +NVL + V L+DFG+A+
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 234 MPRGSLEKCLYSSNYVGFALEYLHFDYSVLIIHYDLKPSNVLF----DDNIVTHLSDFGI 289
+PRG ++ LY L+ +H+ ++ ++H DLKP+N+L + ++D G
Sbjct: 125 LPRGMVKSLLYQ------ILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 178
Query: 290 AKL 292
A+L
Sbjct: 179 ARL 181
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 14/86 (16%)
Query: 265 IHYDLKPSNVLFDDNIVTHLSDFGIAKLLIRED-HFMIQTQTLATIGYMA---------- 313
+H DL NVL + +SDFG++K L +D ++ ++ + + A
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 314 --SYVYSFGIMLLEVFT-RKKPTNKI 336
S V+S+G+ + E + +KP K+
Sbjct: 192 SRSDVWSYGVTMWEALSYGQKPYKKM 217
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 16/88 (18%)
Query: 252 ALEYLHFDYSVLIIHYDLKPSNVLFDDNIVTHLSDFGIAKLLIREDHFMIQTQTLATIGY 311
AL YL S +H D+ NVL N L DFG+++ + ++ L I +
Sbjct: 503 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKW 558
Query: 312 M------------ASYVYSFGIMLLEVF 327
M AS V+ FG+ + E+
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 15/81 (18%)
Query: 222 SNEDFKVLVLEYMPRGSL------EKCLYSSNYVGF------ALEYLHFDYSVLIIHYDL 269
++DF +VLE R SL K + F ++YLH + +IH DL
Sbjct: 112 EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR---VIHRDL 168
Query: 270 KPSNVLFDDNIVTHLSDFGIA 290
K N+ +D++ + DFG+A
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLA 189
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 15/81 (18%)
Query: 222 SNEDFKVLVLEYMPRGSL------EKCLYSSNYVGF------ALEYLHFDYSVLIIHYDL 269
++DF +VLE R SL K + F ++YLH + +IH DL
Sbjct: 112 EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR---VIHRDL 168
Query: 270 KPSNVLFDDNIVTHLSDFGIA 290
K N+ +D++ + DFG+A
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLA 189
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 55 ENLSLASN-ELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFA 113
E L L+ N +L SV P+TF L + L+L L P L L +Y N
Sbjct: 82 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 141
Query: 114 GVIPNAIGCLNILQHLFLGYNRL 136
+ + L L HLFL NR+
Sbjct: 142 ALPDDTFRDLGNLTHLFLHGNRI 164
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 34/79 (43%)
Query: 56 NLSLASNELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAGV 115
+L L N + SV F L + L L N + P +L L+ +Y NN + +
Sbjct: 156 HLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSAL 215
Query: 116 IPNAIGCLNILQHLFLGYN 134
A+ L LQ+L L N
Sbjct: 216 PTEALAPLRALQYLRLNDN 234
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 55 ENLSLASN-ELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFA 113
E L L+ N +L SV P+TF L + L+L L P L L +Y N
Sbjct: 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 142
Query: 114 GVIPNAIGCLNILQHLFLGYNRL 136
+ + L L HLFL NR+
Sbjct: 143 ALPDDTFRDLGNLTHLFLHGNRI 165
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 34/79 (43%)
Query: 56 NLSLASNELISVIPSTFWNLKDILYLNLSLNSLTGPIPLEIENLKVLVKIYFSMNNFAGV 115
+L L N + SV F L + L L N + P +L L+ +Y NN + +
Sbjct: 157 HLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSAL 216
Query: 116 IPNAIGCLNILQHLFLGYN 134
A+ L LQ+L L N
Sbjct: 217 PTEALAPLRALQYLRLNDN 235
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 13/102 (12%)
Query: 202 ECDVMKSTCYRNLIKIISSRSNEDFKVLVLEYMPRGSL------EKCLYSSNYVGFALEY 255
E ++K + N+I + N+ +L+ E + G L ++ L F +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 256 L---HFDYSVLIIHYDLKPSNV-LFDDNIVT---HLSDFGIA 290
L ++ +S+ I H+DLKP N+ L D N+ + DFG+A
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 15/81 (18%)
Query: 222 SNEDFKVLVLEYMPRGSL------EKCLYSSNYVGF------ALEYLHFDYSVLIIHYDL 269
++DF +VLE R SL K + F ++YLH + +IH DL
Sbjct: 112 EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR---VIHRDL 168
Query: 270 KPSNVLFDDNIVTHLSDFGIA 290
K N+ +D++ + DFG+A
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLA 189
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.141 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,134,915
Number of Sequences: 62578
Number of extensions: 413362
Number of successful extensions: 2703
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 361
Number of HSP's that attempted gapping in prelim test: 1378
Number of HSP's gapped (non-prelim): 1187
length of query: 348
length of database: 14,973,337
effective HSP length: 100
effective length of query: 248
effective length of database: 8,715,537
effective search space: 2161453176
effective search space used: 2161453176
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 52 (24.6 bits)