BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038356
(78 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O04486|RAA2A_ARATH Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2
SV=1
Length = 217
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/58 (87%), Positives = 53/58 (91%), Gaps = 1/58 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL 58
I SAYY RGALGALLVYDVTK TTFENVSRWLK+L DHADSNIVIM+IGNKTDLKHL
Sbjct: 76 AITSAYY-RGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHL 132
>sp|Q39572|YPTC6_CHLRE Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6
PE=3 SV=1
Length = 216
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 52/58 (89%), Gaps = 1/58 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL 58
I SAYY RGA+GALLVYD+TKS TFENV RWLK+L DHADSNIVIM++GNK+DLKHL
Sbjct: 76 AITSAYY-RGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDLKHL 132
>sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1
Length = 214
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 50/58 (86%), Gaps = 1/58 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL 58
I SAYY RGA+GALLVYD+TK TF+NV RWL++L DHADSNIVIMM GNK+DLKHL
Sbjct: 76 AITSAYY-RGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHL 132
>sp|Q5ZJN2|RB11A_CHICK Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1
Length = 216
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 58/77 (75%), Gaps = 5/77 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL-- 58
I SAYY RGA+GALLVYD+ K T+ENV RWLK+L DHADSNIVIM++GNK+DL+HL
Sbjct: 75 AITSAYY-RGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 133
Query: 59 -PTSMS-IFQSLSGLLF 73
PT + F +GL F
Sbjct: 134 VPTDEARAFAEKNGLSF 150
>sp|Q2TA29|RB11A_BOVIN Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3
Length = 216
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 58/77 (75%), Gaps = 5/77 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL-- 58
I SAYY RGA+GALLVYD+ K T+ENV RWLK+L DHADSNIVIM++GNK+DL+HL
Sbjct: 75 AITSAYY-RGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 133
Query: 59 -PTSMS-IFQSLSGLLF 73
PT + F +GL F
Sbjct: 134 VPTDEARAFAEKNGLSF 150
>sp|P62494|RB11A_RAT Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1
SV=3
Length = 216
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 58/77 (75%), Gaps = 5/77 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL-- 58
I SAYY RGA+GALLVYD+ K T+ENV RWLK+L DHADSNIVIM++GNK+DL+HL
Sbjct: 75 AITSAYY-RGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 133
Query: 59 -PTSMS-IFQSLSGLLF 73
PT + F +GL F
Sbjct: 134 VPTDEARAFAEKNGLSF 150
>sp|P62493|RB11A_RABIT Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2
SV=3
Length = 216
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 58/77 (75%), Gaps = 5/77 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL-- 58
I SAYY RGA+GALLVYD+ K T+ENV RWLK+L DHADSNIVIM++GNK+DL+HL
Sbjct: 75 AITSAYY-RGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 133
Query: 59 -PTSMS-IFQSLSGLLF 73
PT + F +GL F
Sbjct: 134 VPTDEARAFAEKNGLSF 150
>sp|Q5R9M7|RB11A_PONAB Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3
Length = 216
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 58/77 (75%), Gaps = 5/77 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL-- 58
I SAYY RGA+GALLVYD+ K T+ENV RWLK+L DHADSNIVIM++GNK+DL+HL
Sbjct: 75 AITSAYY-RGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 133
Query: 59 -PTSMS-IFQSLSGLLF 73
PT + F +GL F
Sbjct: 134 VPTDEARAFAEKNGLSF 150
>sp|Q52NJ1|RB11A_PIG Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3
Length = 216
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 58/77 (75%), Gaps = 5/77 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL-- 58
I SAYY RGA+GALLVYD+ K T+ENV RWLK+L DHADSNIVIM++GNK+DL+HL
Sbjct: 75 AITSAYY-RGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 133
Query: 59 -PTSMS-IFQSLSGLLF 73
PT + F +GL F
Sbjct: 134 VPTDEARAFAEKNGLSF 150
>sp|P62492|RB11A_MOUSE Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3
Length = 216
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 58/77 (75%), Gaps = 5/77 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL-- 58
I SAYY RGA+GALLVYD+ K T+ENV RWLK+L DHADSNIVIM++GNK+DL+HL
Sbjct: 75 AITSAYY-RGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 133
Query: 59 -PTSMS-IFQSLSGLLF 73
PT + F +GL F
Sbjct: 134 VPTDEARAFAEKNGLSF 150
>sp|P62491|RB11A_HUMAN Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3
Length = 216
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 58/77 (75%), Gaps = 5/77 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL-- 58
I SAYY RGA+GALLVYD+ K T+ENV RWLK+L DHADSNIVIM++GNK+DL+HL
Sbjct: 75 AITSAYY-RGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 133
Query: 59 -PTSMS-IFQSLSGLLF 73
PT + F +GL F
Sbjct: 134 VPTDEARAFAEKNGLSF 150
>sp|P62490|RB11A_CANFA Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3
Length = 216
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 58/77 (75%), Gaps = 5/77 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL-- 58
I SAYY RGA+GALLVYD+ K T+ENV RWLK+L DHADSNIVIM++GNK+DL+HL
Sbjct: 75 AITSAYY-RGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 133
Query: 59 -PTSMS-IFQSLSGLLF 73
PT + F +GL F
Sbjct: 134 VPTDEARAFAEKNGLSF 150
>sp|Q9LNW1|RAA2B_ARATH Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2
SV=2
Length = 214
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHLPT 60
I SAYY RGA+GALLVYD+TK TFENV RWL++L DHADSNIVIMM GNK+DL HL +
Sbjct: 76 AITSAYY-RGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGNKSDLNHLRS 134
>sp|Q40195|RB11E_LOTJA Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1
Length = 218
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHLPT 60
I SAYY RGA+GALLVYDVT+STTFE RWLK+L DH D NIV+M+IGNK+DL+HL T
Sbjct: 77 AITSAYY-RGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVT 135
>sp|Q40193|RB11C_LOTJA Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1
Length = 216
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 49/58 (84%), Gaps = 1/58 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL 58
I SAYY RGA+GALLVYD+TK TF+NV RWL++L DHADSNIVIMM GNK+DL HL
Sbjct: 76 AITSAYY-RGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHL 132
>sp|P46638|RB11B_MOUSE Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3
Length = 218
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 50/58 (86%), Gaps = 1/58 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL 58
I SAYY RGA+GALLVYD+ K T+ENV RWLK+L DHADSNIVIM++GNK+DL+HL
Sbjct: 75 AITSAYY-RGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
>sp|O35509|RB11B_RAT Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2
SV=4
Length = 218
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 50/58 (86%), Gaps = 1/58 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL 58
I SAYY RGA+GALLVYD+ K T+ENV RWLK+L DHADSNIVIM++GNK+DL+HL
Sbjct: 75 AITSAYY-RGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
>sp|Q15907|RB11B_HUMAN Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4
Length = 218
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 50/58 (86%), Gaps = 1/58 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL 58
I SAYY RGA+GALLVYD+ K T+ENV RWLK+L DHADSNIVIM++GNK+DL+HL
Sbjct: 75 AITSAYY-RGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
>sp|Q3MHP2|RB11B_BOVIN Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3
Length = 218
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 50/58 (86%), Gaps = 1/58 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL 58
I SAYY RGA+GALLVYD+ K T+ENV RWLK+L DHADSNIVIM++GNK+DL+HL
Sbjct: 75 AITSAYY-RGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
>sp|P40393|RIC2_ORYSJ Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2
PE=2 SV=2
Length = 217
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 50/58 (86%), Gaps = 1/58 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL 58
I SAYY RGA+GALLVYDVT+ +TFENV RWLK+L DH D NIV+M++GNK+DL+HL
Sbjct: 78 AITSAYY-RGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHL 134
>sp|Q9S810|RAA1I_ARATH Ras-related protein RABA1i OS=Arabidopsis thaliana GN=RABA1I PE=2
SV=1
Length = 218
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 49/58 (84%), Gaps = 1/58 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL 58
I SAYY RGA+GALLVYDVT+ TFENV RWLK+L DH D+NIVIM++GNK DL+HL
Sbjct: 77 AITSAYY-RGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHL 133
>sp|Q40194|RB11D_LOTJA Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1
Length = 218
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 51/64 (79%), Gaps = 4/64 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL-- 58
I SAYY RGA+GALLVYDVT+ TFEN +RWLK+L DH D NIV+M+IGNK+DL+HL
Sbjct: 77 AITSAYY-RGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVA 135
Query: 59 -PTS 61
PT
Sbjct: 136 VPTE 139
>sp|Q9FJH0|RAA1F_ARATH Ras-related protein RABA1f OS=Arabidopsis thaliana GN=RABA1F PE=2
SV=1
Length = 217
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 48/58 (82%), Gaps = 1/58 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL 58
I SAYY RGA+GALLVYDVT+ TFENV RWLK+L DH D+NIVIM +GNK DL+HL
Sbjct: 77 AITSAYY-RGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRHL 133
>sp|Q96283|RAA2C_ARATH Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2
SV=4
Length = 217
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHLPT 60
I SAYY RGA+GALLVYD+TK TF+NV RWL++L DHADSNIVIMM GNK+DL HL +
Sbjct: 76 AITSAYY-RGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRS 134
>sp|Q9SN35|RAA1D_ARATH Ras-related protein RABA1d OS=Arabidopsis thaliana GN=RABA1D PE=2
SV=1
Length = 214
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 50/58 (86%), Gaps = 1/58 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL 58
I SAYY RGA+GALLVYDVT+ +TFENV RWL++L DH D NIV+M++GNK+DL+HL
Sbjct: 77 AITSAYY-RGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHL 133
>sp|Q9FIF9|RAA2D_ARATH Ras-related protein RABA2d OS=Arabidopsis thaliana GN=RABA2D PE=2
SV=1
Length = 217
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHLPT 60
I SAYY RGA+GALLVYD+TK TF+NV RWL++L DHADSNIVIMM GNK DL HL +
Sbjct: 76 AITSAYY-RGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKADLNHLRS 134
>sp|Q9LK99|RAA1G_ARATH Ras-related protein RABA1g OS=Arabidopsis thaliana GN=RABA1G PE=2
SV=1
Length = 217
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 49/58 (84%), Gaps = 1/58 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL 58
I SAYY RGA+GALLVYDVT+ TFENV RWLK+L DH ++NIVIM++GNK DL+HL
Sbjct: 77 AITSAYY-RGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKADLRHL 133
>sp|Q01111|YPT3_NICPL Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2
SV=1
Length = 218
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 50/58 (86%), Gaps = 1/58 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL 58
I SAYY RGA+GALLVYDVT+ T+ENV+RWLK+L DH D NIV+M+IGNK+DL+HL
Sbjct: 77 AITSAYY-RGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHL 133
>sp|P22129|RB11B_DIPOM Ras-related protein Rab-11B OS=Diplobatis ommata PE=2 SV=1
Length = 218
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 52/63 (82%), Gaps = 4/63 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL-- 58
I SAYY RGA+GALLVYD+ K T+ENV RWLK+L DHAD+NIVIM++GNK+DL+HL
Sbjct: 75 AITSAYY-RGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRA 133
Query: 59 -PT 60
PT
Sbjct: 134 VPT 136
>sp|O49513|RAA1E_ARATH Ras-related protein RABA1e OS=Arabidopsis thaliana GN=RABA1E PE=2
SV=1
Length = 217
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 51/64 (79%), Gaps = 4/64 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL-- 58
I SAYY RGA+GALLVYD+T+ TFENV RWLK+L DH D+N+VIM++GNK DL+HL
Sbjct: 77 AITSAYY-RGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKADLRHLRA 135
Query: 59 -PTS 61
PT
Sbjct: 136 VPTE 139
>sp|P17610|YPT3_SCHPO GTP-binding protein ypt3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt3 PE=1 SV=1
Length = 214
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 51/58 (87%), Gaps = 1/58 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL 58
I SAYY RGA+GAL+VYD+TK ++F+NV RWLK+L +HADSNIVIM++GNKTDL HL
Sbjct: 74 AITSAYY-RGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHL 130
>sp|Q39222|RAA1B_ARATH Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2
SV=1
Length = 216
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 51/64 (79%), Gaps = 4/64 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL-- 58
I SAYY RGA+GALLVYDVT+ TFENV RWLK+L +H D NIV+M++GNK+DL+HL
Sbjct: 77 AITSAYY-RGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLA 135
Query: 59 -PTS 61
PT
Sbjct: 136 VPTE 139
>sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1
Length = 217
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 48/58 (82%), Gaps = 1/58 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL 58
I SAYY RGA+GAL+VYD+T+ TFENV RWLK+L DH D NIVIM++GNK DL+HL
Sbjct: 78 AITSAYY-RGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHL 134
>sp|Q1PEX3|RAA1H_ARATH Ras-related protein RABA1h OS=Arabidopsis thaliana GN=RABA1H PE=2
SV=1
Length = 218
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL 58
I SAYY RGA+GALLVYDVT+ TFENV RWLK+L DH D+N VIM++GNK DL HL
Sbjct: 77 AITSAYY-RGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNKADLNHL 133
>sp|Q40723|RLGP2_ORYSJ Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2
PE=2 SV=2
Length = 217
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 50/58 (86%), Gaps = 1/58 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL 58
I SAYY RGA+GALLVYD+TK +F+NV RWL++L DHADS+IVIMM+GNK+DL HL
Sbjct: 76 AITSAYY-RGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHL 132
>sp|Q40523|RB11A_TOBAC Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1
Length = 216
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 48/58 (82%), Gaps = 1/58 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL 58
I SAYY RGA+GALL YD+TK TF+NV RWL++L DH DSNIVI++ GNK+DLKHL
Sbjct: 76 AITSAYY-RGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGNKSDLKHL 132
>sp|Q9FK68|RAA1C_ARATH Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1
SV=1
Length = 216
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 49/58 (84%), Gaps = 1/58 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL 58
I SAYY RGA+GALLVYDVT+ +TFENV WLK+L +H D NIV+M++GNK+DL+HL
Sbjct: 77 AITSAYY-RGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHL 133
>sp|P28185|RAA1A_ARATH Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=1
SV=1
Length = 216
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL 58
I SAYY RGA+GALL+YDVT+ TFEN +RWL++L H D NIV+M+IGNK DL+HL
Sbjct: 77 AITSAYY-RGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHL 133
>sp|Q40522|RB11D_TOBAC Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1
Length = 222
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 54/77 (70%), Gaps = 5/77 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDL---KH 57
+ SAYY RGA+GA+LVYD+TK TF+++ RWL++L HAD NIVIM+IGNKTDL +
Sbjct: 79 AVTSAYY-RGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRA 137
Query: 58 LPTS-MSIFQSLSGLLF 73
+PT F GL F
Sbjct: 138 VPTEDAKEFAQKEGLFF 154
>sp|Q40520|RB11C_TOBAC Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1
Length = 222
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDL---KH 57
+ SAYY RGA+GA+LVYD+TK TF+++ RWL++L HAD NIVIM+ GNKTDL +
Sbjct: 79 AVTSAYY-RGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRA 137
Query: 58 LPTS-MSIFQSLSGLLF 73
+PT F GL F
Sbjct: 138 VPTEDAKEFAQKEGLFF 154
>sp|Q9FE79|RAA4C_ARATH Ras-related protein RABA4c OS=Arabidopsis thaliana GN=RABA4C PE=2
SV=1
Length = 223
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 51/64 (79%), Gaps = 4/64 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTD---LKH 57
+ SAYY RGA+GA+LVYD+TK +F++V+RWL++L HAD NIVIM+IGNKTD L+
Sbjct: 79 AVTSAYY-RGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKTDLGTLRA 137
Query: 58 LPTS 61
+PT
Sbjct: 138 VPTE 141
>sp|Q9SMQ6|RAA4B_ARATH Ras-related protein RABA4b OS=Arabidopsis thaliana GN=RABA4B PE=2
SV=1
Length = 224
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 54/77 (70%), Gaps = 5/77 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDL---KH 57
+ SAYY RGA+GA+LVYD+TK TFE++ RWL++L HAD NIVI++IGNK+DL +
Sbjct: 81 AVTSAYY-RGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDLEDQRA 139
Query: 58 LPTS-MSIFQSLSGLLF 73
+PT F GL F
Sbjct: 140 VPTEDAKEFAEKEGLFF 156
>sp|Q40191|RB11A_LOTJA Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1
Length = 226
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 54/77 (70%), Gaps = 5/77 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDL---KH 57
+ SAYY RGA+GA+LVYD+TK TF+++ RWL++L +HAD NIVI++IGNK DL +
Sbjct: 81 AVTSAYY-RGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRD 139
Query: 58 LPTS-MSIFQSLSGLLF 73
+PT F GL F
Sbjct: 140 VPTEDAKEFAEKEGLFF 156
>sp|E2RQ15|RAB25_CANFA Ras-related protein Rab-25 OS=Canis familiaris GN=RAB25 PE=3 SV=1
Length = 213
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 57/77 (74%), Gaps = 5/77 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDL---KH 57
I SAYY RGA+GALLV+D+TK T+ V RWLK+L DHA++ IV+M++GNK+DL +
Sbjct: 76 AITSAYY-RGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLHQARE 134
Query: 58 LPTSMS-IFQSLSGLLF 73
+PT + +F +GLLF
Sbjct: 135 VPTEEARMFAENNGLLF 151
>sp|P57735|RAB25_HUMAN Ras-related protein Rab-25 OS=Homo sapiens GN=RAB25 PE=1 SV=2
Length = 213
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 57/77 (74%), Gaps = 5/77 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDL---KH 57
I SAYY RGA+GALLV+D+TK T+ V RWLK+L DHA++ IV+M++GNK+DL +
Sbjct: 76 AITSAYY-RGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQARE 134
Query: 58 LPTSMS-IFQSLSGLLF 73
+PT + +F +GLLF
Sbjct: 135 VPTEEARMFAENNGLLF 151
>sp|P46629|RAB25_RABIT Ras-related protein Rab-25 OS=Oryctolagus cuniculus GN=RAB25 PE=2
SV=1
Length = 213
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 57/77 (74%), Gaps = 5/77 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDL---KH 57
I SAYY RGA+GALLV+D+TK T+ V RWLK+L DHA++ IV+M++GNK+DL +
Sbjct: 76 AITSAYY-RGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQARE 134
Query: 58 LPTSMS-IFQSLSGLLF 73
+PT + +F +GLLF
Sbjct: 135 VPTEEARMFAENNGLLF 151
>sp|Q58DW6|RAB25_BOVIN Ras-related protein Rab-25 OS=Bos taurus GN=RAB25 PE=2 SV=1
Length = 213
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 57/77 (74%), Gaps = 5/77 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDL---KH 57
I SAYY RGA+GALLV+D+TK T+ V RWLK+L DHA++ IV+M++GNK+DL +
Sbjct: 76 AITSAYY-RGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSRE 134
Query: 58 LPTSMS-IFQSLSGLLF 73
+PT + +F +GLLF
Sbjct: 135 VPTEEARMFAENNGLLF 151
>sp|Q9WTL2|RAB25_MOUSE Ras-related protein Rab-25 OS=Mus musculus GN=Rab25 PE=1 SV=2
Length = 213
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 57/77 (74%), Gaps = 5/77 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDL---KH 57
I SAYY RGA+GALLV+D+TK T+ V RWLK+L DHA++ IV+M++GNK+DL +
Sbjct: 76 AITSAYY-RGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQARE 134
Query: 58 LPTSMS-IFQSLSGLLF 73
+PT + +F +GLLF
Sbjct: 135 VPTEEACMFAENNGLLF 151
>sp|Q9FJN8|RAA4A_ARATH Ras-related protein RABA4a OS=Arabidopsis thaliana GN=RABA4A PE=2
SV=1
Length = 226
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 54/77 (70%), Gaps = 5/77 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDL---KH 57
+ SAYY RGA+GA+LVYD+T+ TF+++ RWL++L HAD NIVI++IGNK+DL +
Sbjct: 81 AVTSAYY-RGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSDLVDQRA 139
Query: 58 LPTS-MSIFQSLSGLLF 73
+PT F GL F
Sbjct: 140 IPTEDAKEFAEKEGLFF 156
>sp|P25766|RLGP1_ORYSJ Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1
PE=2 SV=2
Length = 226
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 50/64 (78%), Gaps = 4/64 (6%)
Query: 1 VINSAYYNRGALGALLVYDVTKSTTFENVSRWLKDLGDHADSNIVIMMIGNKTDLKHL-- 58
+ SAYY RGA+GA+LVYD+TK +F++V+RWL++L HAD NIVIM+IGNK+DL L
Sbjct: 82 AVTSAYY-RGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRV 140
Query: 59 -PTS 61
PT
Sbjct: 141 VPTE 144
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,980,909
Number of Sequences: 539616
Number of extensions: 799433
Number of successful extensions: 2757
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 204
Number of HSP's that attempted gapping in prelim test: 2252
Number of HSP's gapped (non-prelim): 627
length of query: 78
length of database: 191,569,459
effective HSP length: 49
effective length of query: 29
effective length of database: 165,128,275
effective search space: 4788719975
effective search space used: 4788719975
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)