BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>038362
MHQSLVFLCLLAAIFFHHSRGDVGTAARYGPPFLPTACNGNDQSQFPSGNLFAAAGEGIW
DNGASCGRQYKLRCISAAVSGTCINNTIQIKIVDRAQSLVSTPSLKGTTI

High Scoring Gene Products

Symbol, full name Information P value
PNP-A
plant natriuretic peptide A
protein from Arabidopsis thaliana 3.6e-09
AT4G30380 protein from Arabidopsis thaliana 1.4e-07
EXPA11
expansin 11
protein from Arabidopsis thaliana 0.00050

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038362
        (110 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2053983 - symbol:PNP-A "plant natriuretic pept...   135  3.6e-09   1
TAIR|locus:2118656 - symbol:AT4G30380 "AT4G30380" species...   120  1.4e-07   1
TAIR|locus:2198576 - symbol:EXPA11 "expansin 11" species:...    92  0.00050   1


>TAIR|locus:2053983 [details] [associations]
            symbol:PNP-A "plant natriuretic peptide A" species:3702
            "Arabidopsis thaliana" [GO:0005576 "extracellular region"
            evidence=ISM;ISS] [GO:0005618 "cell wall" evidence=IDA] [GO:0048046
            "apoplast" evidence=IDA] [GO:0010230 "alternative respiration"
            evidence=IDA] [GO:0009627 "systemic acquired resistance"
            evidence=RCA] [GO:0034976 "response to endoplasmic reticulum
            stress" evidence=RCA] GO:GO:0005618 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0048046 GO:GO:0010230 EMBL:AC005724
            HOGENOM:HOG000242042 Gene3D:2.40.40.10 InterPro:IPR014733
            InterPro:IPR009009 InterPro:IPR007112 Pfam:PF03330 SMART:SM00837
            SUPFAM:SSF50685 PROSITE:PS50842 EMBL:AY065269 EMBL:AY142603
            IPI:IPI00537939 PIR:A84567 RefSeq:NP_849979.1 UniGene:At.28538
            ProteinModelPortal:Q9ZV52 SMR:Q9ZV52 STRING:Q9ZV52
            EnsemblPlants:AT2G18660.1 GeneID:816381 KEGG:ath:AT2G18660
            TAIR:At2g18660 eggNOG:NOG312066 InParanoid:Q9ZV52 OMA:RYRVRCI
            PhylomeDB:Q9ZV52 ProtClustDB:CLSN2918029 Genevestigator:Q9ZV52
            GermOnline:AT2G18660 Uniprot:Q9ZV52
        Length = 130

 Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 30/92 (32%), Positives = 45/92 (48%)

Query:     5 LVFLCLLAAIFFHHSRGDVGTAARYGPPFLPTACNGNDQSQFPSGNLFAAAGEGIWDNGA 64
             +VF  +LA I    +    G A  Y PP+  +AC G  +       L       +W NG 
Sbjct:    13 IVFAQILAPI----AEAAQGKAVYYDPPYTRSACYGTQRE-----TLVVGVKNNLWQNGR 63

Query:    65 SCGRQYKLRCISAAVS--GTCINNTIQIKIVD 94
             +CGR+Y++RCI A  +    C   T+ +K+VD
Sbjct:    64 ACGRRYRVRCIGATYNFDRACTGRTVDVKVVD 95


>TAIR|locus:2118656 [details] [associations]
            symbol:AT4G30380 "AT4G30380" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0071456 "cellular response
            to hypoxia" evidence=IEP] GO:GO:0005576 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0071456 EMBL:AL161577
            IPI:IPI00532361 PIR:C85355 RefSeq:NP_194767.1 UniGene:At.54557
            ProteinModelPortal:Q9M0C2 SMR:Q9M0C2 EnsemblPlants:AT4G30380.1
            GeneID:829161 KEGG:ath:AT4G30380 TAIR:At4g30380 eggNOG:NOG296324
            HOGENOM:HOG000242042 InParanoid:Q9M0C2 OMA:PHPCTGK PhylomeDB:Q9M0C2
            ProtClustDB:PLN03024 Genevestigator:Q9M0C2 GermOnline:AT4G30380
            Gene3D:2.40.40.10 InterPro:IPR014733 InterPro:IPR009009
            InterPro:IPR007112 Pfam:PF03330 SMART:SM00837 SUPFAM:SSF50685
            PROSITE:PS50842 Uniprot:Q9M0C2
        Length = 123

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 31/100 (31%), Positives = 46/100 (46%)

Query:     1 MHQSLVFLCLLAAIFFHHSRGDVGTAARYGPPFLPTACNGNDQSQFPSGNLFAAAGEGIW 60
             M +S+VF   +    F  S    G A  Y   + P  C    Q     G + AAA + +W
Sbjct:     1 MSKSIVFFSTVLVFLFSFSYATPGIATFY-TSYTP--CYRGTQE----GVMIAAASDTLW 53

Query:    61 DNGASCGRQYKLRCISA--AVSGTCINNTIQIKIVDRAQS 98
             DNG  CG+ + ++C     AV   C   ++++KIVD   S
Sbjct:    54 DNGRVCGKMFTVKCSGPRNAVPHPCTGKSVKVKIVDHCPS 93


>TAIR|locus:2198576 [details] [associations]
            symbol:EXPA11 "expansin 11" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM;IEA]
            [GO:0009664 "plant-type cell wall organization" evidence=IEA]
            [GO:0009826 "unidimensional cell growth" evidence=ISS;NAS]
            [GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS]
            [GO:0009831 "plant-type cell wall modification involved in
            multidimensional cell growth" evidence=ISS] [GO:0005618 "cell wall"
            evidence=IDA] InterPro:IPR002963 InterPro:IPR007118 PRINTS:PR01225
            PRINTS:PR01226 Pfam:PF01357 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005618 GO:GO:0005576 GO:GO:0016020 EMBL:AC022472
            Gene3D:2.40.40.10 InterPro:IPR014733 InterPro:IPR009009
            InterPro:IPR007112 Pfam:PF03330 SMART:SM00837 SUPFAM:SSF50685
            PROSITE:PS50842 GO:GO:0009664 Gene3D:2.60.40.760 InterPro:IPR007117
            SUPFAM:SSF49590 PROSITE:PS50843 EMBL:AF332436 IPI:IPI00541892
            PIR:F86335 RefSeq:NP_173446.1 UniGene:At.20255
            ProteinModelPortal:Q9LNU3 SMR:Q9LNU3 STRING:Q9LNU3 PaxDb:Q9LNU3
            PRIDE:Q9LNU3 EnsemblPlants:AT1G20190.1 GeneID:838608
            KEGG:ath:AT1G20190 TAIR:At1g20190 eggNOG:NOG281397
            HOGENOM:HOG000220793 InParanoid:Q9LNU3 OMA:KAFATFY PhylomeDB:Q9LNU3
            ProtClustDB:PLN00193 Genevestigator:Q9LNU3 GermOnline:AT1G20190
            Uniprot:Q9LNU3
        Length = 252

 Score = 92 (37.4 bits), Expect = 0.00050, P = 0.00050
 Identities = 31/93 (33%), Positives = 43/93 (46%)

Query:     1 MHQSLVFLCLLAAIF-----FHHSRGDVGTAARYGPP----FLPTACNGNDQSQFPSGNL 51
             M +SL  L +LAA+F     F  S    G A  YG       +  AC   D      G +
Sbjct:     1 MSKSLAGLAVLAALFIAVDAFRPSGLTNGHATFYGGSDASGTMGGACGYGDLYSAGYGTM 60

Query:    52 FAAAGEGIWDNGASCGRQYKLRCISAAVSGTCI 84
              AA    ++++GASCG  Y++ C  AA S  C+
Sbjct:    61 TAALSTALFNDGASCGECYRITCDHAADSRWCL 93


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.425    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      110       110   0.00091  102 3  11 22  0.41    30
                                                     29  0.42    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  561 (60 KB)
  Total size of DFA:  125 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.91u 0.14s 11.05t   Elapsed:  00:00:00
  Total cpu time:  10.91u 0.14s 11.05t   Elapsed:  00:00:00
  Start:  Sat May 11 03:26:07 2013   End:  Sat May 11 03:26:07 2013

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