Query 038362
Match_columns 110
No_of_seqs 121 out of 719
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 17:38:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038362.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038362hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2hcz_X Beta-expansin 1A; domai 99.9 7.7E-23 2.6E-27 158.0 8.7 77 19-98 17-99 (245)
2 1n10_A PHL P I, pollen allerge 99.9 9.1E-23 3.1E-27 157.4 8.7 76 19-98 17-99 (241)
3 1wc2_A Endoglucanase; hydrolas 99.8 4.3E-21 1.5E-25 142.9 7.0 81 19-100 12-107 (181)
4 3d30_A YOAJ, expansin like pro 99.8 2.4E-19 8E-24 135.2 7.3 70 18-99 3-76 (208)
5 1bw3_A Barwin, basic barley SE 98.9 1.4E-10 4.9E-15 81.9 0.8 32 61-99 58-89 (125)
6 4avr_A PA4485; unknown functio 98.4 8.5E-07 2.9E-11 59.8 6.4 61 22-99 2-64 (95)
7 2kqa_A Cerato-platanin; elicit 94.7 0.05 1.7E-06 38.3 5.0 45 45-98 45-90 (129)
8 3m3g_A EPL1 protein; fungal, p 93.9 0.066 2.3E-06 37.2 4.1 45 45-99 39-84 (120)
9 3sul_A Cerato-platanin-like pr 93.5 0.06 2E-06 37.5 3.3 41 51-99 45-86 (122)
10 3sum_A Cerato-platanin-like pr 93.0 0.11 3.7E-06 36.8 4.1 37 50-99 48-84 (136)
11 3suj_A Cerato-platanin 1; doub 92.5 0.096 3.3E-06 36.7 3.3 49 46-99 40-89 (127)
12 3suk_A Cerato-platanin-like pr 92.0 0.14 4.7E-06 35.8 3.5 48 46-99 41-89 (125)
13 2eng_A Endoglucanase V; cellul 82.0 1.1 3.8E-05 33.7 3.3 43 52-98 72-114 (210)
14 3nrl_A Uncharacterized protein 65.7 4.8 0.00017 26.0 2.8 26 49-74 16-41 (81)
15 3sok_A Fimbrial protein; pilus 30.2 27 0.00094 23.7 2.1 16 3-18 4-19 (151)
16 1oqw_A Fimbrial protein; type 29.3 29 0.001 23.1 2.1 16 3-18 4-19 (144)
17 2hi2_A Fimbrial protein; type 29.1 29 0.001 23.3 2.1 16 3-18 4-19 (158)
18 3ixs_B RING1 and YY1-binding p 21.6 40 0.0014 18.5 1.3 12 86-97 22-33 (37)
No 1
>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}
Probab=99.88 E-value=7.7e-23 Score=158.03 Aligned_cols=77 Identities=25% Similarity=0.448 Sum_probs=66.2
Q ss_pred cCcccccEEEeCCCC------CCCCCCCCCCCCCCCCCeEEEechhhhCCcccccceEEEEecccCcCCcccCCcEEEEE
Q 038362 19 SRGDVGTAARYGPPF------LPTACNGNDQSQFPSGNLFAAAGEGIWDNGASCGRQYKLRCISAAVSGTCINNTIQIKI 92 (110)
Q Consensus 19 a~~~~g~AT~Yg~~~------~~GACyg~~~~~~~~g~~vaAlS~~lf~nG~~CG~cy~V~C~~~~~~~~C~~~sV~V~V 92 (110)
..|..|+||||++++ .+|||++.+..+.|++.++||+|++||++|++||+||||+|.+ +.+|++++|+|+|
T Consensus 17 ~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~---~~~C~~~sv~V~V 93 (245)
T 2hcz_X 17 GKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKE---KPECSGNPVTVYI 93 (245)
T ss_dssp CCCEEEEEEECSCTTSCSSTTSCCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCS---SSSBCSSCEEEEE
T ss_pred CceeeeEEEEeCCCCCCCcCCCCccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCC---CCccCCCCEEEEE
Confidence 458899999999876 3689943335566889999999999999999999999999976 3579999999999
Q ss_pred ecCCCC
Q 038362 93 VDRAQS 98 (110)
Q Consensus 93 tD~CP~ 98 (110)
||+||+
T Consensus 94 tD~C~C 99 (245)
T 2hcz_X 94 TDMNYE 99 (245)
T ss_dssp EEECCC
T ss_pred EeccCC
Confidence 999975
No 2
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=99.88 E-value=9.1e-23 Score=157.38 Aligned_cols=76 Identities=18% Similarity=0.455 Sum_probs=63.5
Q ss_pred cCcccccEEEeCCCC------CCCCC-CCCCCCCCCCCCeEEEechhhhCCcccccceEEEEecccCcCCcccCCcEEEE
Q 038362 19 SRGDVGTAARYGPPF------LPTAC-NGNDQSQFPSGNLFAAAGEGIWDNGASCGRQYKLRCISAAVSGTCINNTIQIK 91 (110)
Q Consensus 19 a~~~~g~AT~Yg~~~------~~GAC-yg~~~~~~~~g~~vaAlS~~lf~nG~~CG~cy~V~C~~~~~~~~C~~~sV~V~ 91 (110)
..|.+|+||||++++ .+||| |++ .++.+++.++||+|++||++|++||+||||||.+ +.+|++++|+|+
T Consensus 17 ~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~-~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~---~~~C~~~~v~V~ 92 (241)
T 1n10_A 17 DKWLDAKSTWYGKPTGAGPKDNGGACGYKD-VDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTK---PEACSGEPVVVH 92 (241)
T ss_dssp CSCEEEEEEEEC----------CCTTCCCC-TTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECS---STTBCSCCEEEE
T ss_pred CCceeeEEEEeCCCCCCCcCCCCeeCCCCC-cCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCC---CCccCCCCEEEE
Confidence 468899999999875 47999 554 5566889999999999999999999999999976 347999999999
Q ss_pred EecCCCC
Q 038362 92 IVDRAQS 98 (110)
Q Consensus 92 VtD~CP~ 98 (110)
|||+|++
T Consensus 93 VtD~C~C 99 (241)
T 1n10_A 93 ITDDNEE 99 (241)
T ss_dssp EEEECSS
T ss_pred EeEecCC
Confidence 9999954
No 3
>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1
Probab=99.83 E-value=4.3e-21 Score=142.91 Aligned_cols=81 Identities=22% Similarity=0.364 Sum_probs=63.4
Q ss_pred cCcccccEEEeCCCCCCCCC-CCC----CCCCCCCCCeEEEechhhhCCc------ccccceEEEEecccCc---CCccc
Q 038362 19 SRGDVGTAARYGPPFLPTAC-NGN----DQSQFPSGNLFAAAGEGIWDNG------ASCGRQYKLRCISAAV---SGTCI 84 (110)
Q Consensus 19 a~~~~g~AT~Yg~~~~~GAC-yg~----~~~~~~~g~~vaAlS~~lf~nG------~~CG~cy~V~C~~~~~---~~~C~ 84 (110)
..++.++||||+++ .+||| ||. ..++.++|.++||||++||++| ++||+||||+|.+..- ..+|.
T Consensus 12 ~g~~~A~aT~Yg~~-~gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg~~~~ 90 (181)
T 1wc2_A 12 NGKSCASTTNYHDS-HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQGGPVR 90 (181)
T ss_dssp TTEEEEEEEEECCC-BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSCCCCC
T ss_pred CCccccceeEecCC-CCcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCcccccccCC
Confidence 34677999999976 58899 663 3455567999999999999997 8999999999976410 02344
Q ss_pred -CCcEEEEEecCCCCCC
Q 038362 85 -NNTIQIKIVDRAQSLV 100 (110)
Q Consensus 85 -~~sV~V~VtD~CP~~~ 100 (110)
+++|+|+|||+||++.
T Consensus 91 ~g~SI~VtaTN~CPpn~ 107 (181)
T 1wc2_A 91 EGLSKTFMITNLCPNIY 107 (181)
T ss_dssp TTCEEEEEEEEEECSST
T ss_pred CCCeEEEEEecCCCCCC
Confidence 4689999999999763
No 4
>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A
Probab=99.78 E-value=2.4e-19 Score=135.25 Aligned_cols=70 Identities=16% Similarity=0.073 Sum_probs=59.4
Q ss_pred hcCcccccEEEeCCCCCCCCCCCCCCCCCCCCCeEEEechhhhCCc----ccccceEEEEecccCcCCcccCCcEEEEEe
Q 038362 18 HSRGDVGTAARYGPPFLPTACNGNDQSQFPSGNLFAAAGEGIWDNG----ASCGRQYKLRCISAAVSGTCINNTIQIKIV 93 (110)
Q Consensus 18 ~a~~~~g~AT~Yg~~~~~GACyg~~~~~~~~g~~vaAlS~~lf~nG----~~CG~cy~V~C~~~~~~~~C~~~sV~V~Vt 93 (110)
......|+||||+++..+|||+... .+++.++||+|+.+|++| +.||+||||+| .+++|+|+||
T Consensus 3 ~~~~~~G~aT~Y~~g~~~GACG~~~---~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~---------~~gsv~V~v~ 70 (208)
T 3d30_A 3 YDDLHEGYATYTGSGYSGGAFLLDP---IPSDMEITAINPADLNYGGVKAALAGSYLEVEG---------PKGKTTVYVT 70 (208)
T ss_dssp TTCCEEEEEEECSTTSSSCTTCCCC---CCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEE---------TTEEEEEEEE
T ss_pred CCCcEEEEEEEcCCCCCCCcCCCCC---CCCCCEEEEeCHHHhCCCCcCccccCCEEEEEe---------CCCcEEEEEE
Confidence 3456789999999877789996432 367899999999999998 89999999998 2358999999
Q ss_pred cCCCCC
Q 038362 94 DRAQSL 99 (110)
Q Consensus 94 D~CP~~ 99 (110)
|+||+|
T Consensus 71 D~CP~C 76 (208)
T 3d30_A 71 DLYPEG 76 (208)
T ss_dssp EECTTC
T ss_pred ECCCCC
Confidence 999987
No 5
>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A
Probab=98.93 E-value=1.4e-10 Score=81.88 Aligned_cols=32 Identities=22% Similarity=0.395 Sum_probs=28.1
Q ss_pred CCcccccceEEEEecccCcCCcccCCcEEEEEecCCCCC
Q 038362 61 DNGASCGRQYKLRCISAAVSGTCINNTIQIKIVDRAQSL 99 (110)
Q Consensus 61 ~nG~~CG~cy~V~C~~~~~~~~C~~~sV~V~VtD~CP~~ 99 (110)
++++.||+|++|++.. ++++|+|+|+|+||.+
T Consensus 58 ~~g~~CG~cv~Vtn~~-------nGksV~V~VvD~CP~g 89 (125)
T 1bw3_A 58 RGQAACGKCLRVTNPA-------TGAQITARIVDQCANG 89 (125)
T ss_dssp CSGGGTTCEEEEEETT-------TTEEEEEEEEECCSSS
T ss_pred CCCcccCCEEEeEeCC-------CCCEEEEEEEEeCCCC
Confidence 8899999999999843 4689999999999864
No 6
>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}
Probab=98.37 E-value=8.5e-07 Score=59.84 Aligned_cols=61 Identities=21% Similarity=0.294 Sum_probs=46.6
Q ss_pred ccccEEEeCCCCC--CCCCCCCCCCCCCCCCeEEEechhhhCCcccccceEEEEecccCcCCcccCCcEEEEEecCCCCC
Q 038362 22 DVGTAARYGPPFL--PTACNGNDQSQFPSGNLFAAAGEGIWDNGASCGRQYKLRCISAAVSGTCINNTIQIKIVDRAQSL 99 (110)
Q Consensus 22 ~~g~AT~Yg~~~~--~GACyg~~~~~~~~g~~vaAlS~~lf~nG~~CG~cy~V~C~~~~~~~~C~~~sV~V~VtD~CP~~ 99 (110)
+.|.|+||++... ..|++... ....|+||-.+ .-||...+|+... ++++|+|+|.|+||-.
T Consensus 2 ~~G~ASwYg~~f~G~~TA~Ge~~----~~~~~tAAH~t------lP~gt~vrVtNl~-------nGksVvVrVnDRGP~~ 64 (95)
T 4avr_A 2 DTGEASYYGSRHAGLRTASGERY----NPNAMTAAHRT------LPFGARVRVTNLD-------NRRSVVVRINDRGPFR 64 (95)
T ss_dssp EEEEEEECCGGGTTSBCTTSCBC----CTTSCEEECSS------SCTTCEEEEEETT-------TCCEEEEEEEECCCCS
T ss_pred CEEEEEEECCccCCCCCCCccCc----CCCCCEEEcCC------CCCCcEEEEEECC-------CCcEEEEEEccCCCCC
Confidence 4699999997543 46885433 35688888774 3699999999644 5799999999999854
No 7
>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}
Probab=94.74 E-value=0.05 Score=38.26 Aligned_cols=45 Identities=27% Similarity=0.439 Sum_probs=33.4
Q ss_pred CCCCCCeEEEechhh-hCCcccccceEEEEecccCcCCcccCCcEEEEEecCCCC
Q 038362 45 QFPSGNLFAAAGEGI-WDNGASCGRQYKLRCISAAVSGTCINNTIQIKIVDRAQS 98 (110)
Q Consensus 45 ~~~~g~~vaAlS~~l-f~nG~~CG~cy~V~C~~~~~~~~C~~~sV~V~VtD~CP~ 98 (110)
++|.=-+|.+....- |+ ...||.||||+. + ++++|.|+.+|.-+.
T Consensus 45 ~lp~FP~IGga~~iagWN-S~~CGtC~~lty-----~---ng~sI~vlaID~A~~ 90 (129)
T 2kqa_A 45 EVPGFPNVGGIPDIAGWD-SPSCGTCWKVTI-----P---NGNSIFIRGVDSGRG 90 (129)
T ss_dssp SSSCSSSEEEETTCCSTT-CTTCSCEEEEEE-----T---TTEEEEEEEEEECSS
T ss_pred cCCCCCeeccchhhccCC-CCCCCceEEEEE-----c---CCCEEEEEEEccCCC
Confidence 445346677776543 76 799999999996 2 368999999998764
No 8
>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}
Probab=93.91 E-value=0.066 Score=37.16 Aligned_cols=45 Identities=38% Similarity=0.521 Sum_probs=32.1
Q ss_pred CCCCCCeEEEech-hhhCCcccccceEEEEecccCcCCcccCCcEEEEEecCCCCC
Q 038362 45 QFPSGNLFAAAGE-GIWDNGASCGRQYKLRCISAAVSGTCINNTIQIKIVDRAQSL 99 (110)
Q Consensus 45 ~~~~g~~vaAlS~-~lf~nG~~CG~cy~V~C~~~~~~~~C~~~sV~V~VtD~CP~~ 99 (110)
++|.=-+|.+... .=| |...||.|||++. ++++|.|..+|.-++.
T Consensus 39 ~lp~FP~IGg~~~i~gw-ns~~CGtC~~lty---------~g~si~vlaID~a~~G 84 (120)
T 3m3g_A 39 QIPRFPYIGGAAAVAGW-NSASCGTCWKLQY---------SGHTIYVLAVDHAASG 84 (120)
T ss_dssp GSTTTTSEEEETTCCST-TCTTTTCEEEEEE---------TTEEEEEEEEEECSSS
T ss_pred cCCCCCccccccccccC-CCCCCCceEEEEE---------CCeEEEEEEEecCCCc
Confidence 3443356666654 346 4599999999996 3689999999987554
No 9
>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}
Probab=93.46 E-value=0.06 Score=37.48 Aligned_cols=41 Identities=27% Similarity=0.417 Sum_probs=30.3
Q ss_pred eEEEech-hhhCCcccccceEEEEecccCcCCcccCCcEEEEEecCCCCC
Q 038362 51 LFAAAGE-GIWDNGASCGRQYKLRCISAAVSGTCINNTIQIKIVDRAQSL 99 (110)
Q Consensus 51 ~vaAlS~-~lf~nG~~CG~cy~V~C~~~~~~~~C~~~sV~V~VtD~CP~~ 99 (110)
+|.+... +-|++ ..||.|||++... .+++|.|..+|.-++.
T Consensus 45 FIGg~~~V~gwnS-~~CGtC~~lty~~-------~g~si~vlaID~a~~G 86 (122)
T 3sul_A 45 YVGAVDTITGWNS-ESCGTCYQITWSG-------TGKTIHVVGVDVAGNG 86 (122)
T ss_dssp EEEEETTCCSTTC-TTTTCEEEEEETT-------TTEEEEEEEEEECSSS
T ss_pred ccccccccccCCC-CCCCceEEEEEcC-------CCcEEEEEEEecCCCc
Confidence 3655544 34766 9999999999732 3689999999987654
No 10
>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}
Probab=92.98 E-value=0.11 Score=36.83 Aligned_cols=37 Identities=32% Similarity=0.470 Sum_probs=29.3
Q ss_pred CeEEEechhhhCCcccccceEEEEecccCcCCcccCCcEEEEEecCCCCC
Q 038362 50 NLFAAAGEGIWDNGASCGRQYKLRCISAAVSGTCINNTIQIKIVDRAQSL 99 (110)
Q Consensus 50 ~~vaAlS~~lf~nG~~CG~cy~V~C~~~~~~~~C~~~sV~V~VtD~CP~~ 99 (110)
-+|.+.. | |...||.|++++. ++++|.|..+|.-.+.
T Consensus 48 P~igg~~---w-ns~~CGtCwkLtY---------~G~sI~vlaID~a~~g 84 (136)
T 3sum_A 48 PHFVAAP---E-AQTECGSCWKLRY---------KGNHAFVTVVDRVEEA 84 (136)
T ss_dssp TSEEECC---B-TTBCTTCEEEEEE---------TTEEEEEEEEECCCST
T ss_pred Ccccccc---c-CCCCCCceEEEEE---------CCeEEEEEEEecCCCc
Confidence 4566666 4 6699999999996 3689999999987544
No 11
>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=92.52 E-value=0.096 Score=36.66 Aligned_cols=49 Identities=22% Similarity=0.392 Sum_probs=32.1
Q ss_pred CCCCCeEEEech-hhhCCcccccceEEEEecccCcCCcccCCcEEEEEecCCCCC
Q 038362 46 FPSGNLFAAAGE-GIWDNGASCGRQYKLRCISAAVSGTCINNTIQIKIVDRAQSL 99 (110)
Q Consensus 46 ~~~g~~vaAlS~-~lf~nG~~CG~cy~V~C~~~~~~~~C~~~sV~V~VtD~CP~~ 99 (110)
+|.=-+|.+... .=|| ...||.|||++..+.. . ..++|.|..+|.-++.
T Consensus 40 lp~FP~IGg~~~i~gwn-s~~CGtC~~lty~g~~---~-~~~si~vlaID~a~~G 89 (127)
T 3suj_A 40 LPGFPCIGGSSDIAGYN-SPNCGSCYQLTYSSAH---T-TPKSIYMVAIDRSAEG 89 (127)
T ss_dssp STTTTSEEEETTCCSTT-CTTTTCEEEEEECCSS---S-CCEEEEEEEEEECSSS
T ss_pred cCCCCeeccccccccCC-CCCCCceEEEEECCCC---C-cceEEEEEEEecCCCc
Confidence 343355666553 3464 5999999999974310 0 2279999999987654
No 12
>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=91.98 E-value=0.14 Score=35.77 Aligned_cols=48 Identities=21% Similarity=0.451 Sum_probs=32.7
Q ss_pred CCCCCeEEEech-hhhCCcccccceEEEEecccCcCCcccCCcEEEEEecCCCCC
Q 038362 46 FPSGNLFAAAGE-GIWDNGASCGRQYKLRCISAAVSGTCINNTIQIKIVDRAQSL 99 (110)
Q Consensus 46 ~~~g~~vaAlS~-~lf~nG~~CG~cy~V~C~~~~~~~~C~~~sV~V~VtD~CP~~ 99 (110)
+|.=-+|.+... .=|| ...||.|||++..+ +. .+++|.|..+|.-++.
T Consensus 41 lp~FP~IGg~~~i~gwn-S~~CGtC~~lty~g---~~--~~~si~vlaID~a~~G 89 (125)
T 3suk_A 41 VPTFPHIGASSDIGGFN-SPACGNCYTISFTF---QG--VTRSINLVAIDHAGNG 89 (125)
T ss_dssp STTTTSEEEETTCCSTT-CTTTTCEEEEEEEE---TT--EEEEEEEEEEEECSSS
T ss_pred cCCCCeeccccccccCC-CCCCCeeEEEEEcC---CC--cceEEEEEEEecCCCc
Confidence 343356776654 3464 49999999999743 10 2389999999987544
No 13
>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A
Probab=81.96 E-value=1.1 Score=33.70 Aligned_cols=43 Identities=16% Similarity=0.226 Sum_probs=28.2
Q ss_pred EEEechhhhCCcccccceEEEEecccCcCCcccCCcEEEEEecCCCC
Q 038362 52 FAAAGEGIWDNGASCGRQYKLRCISAAVSGTCINNTIQIKIVDRAQS 98 (110)
Q Consensus 52 vaAlS~~lf~nG~~CG~cy~V~C~~~~~~~~C~~~sV~V~VtD~CP~ 98 (110)
+||.+-.=-.....|++||+++-.+. ..++|...|+||+...+
T Consensus 72 FaA~~~~g~~e~~~Cc~C~~LtFt~~----~~~GKkmiVQ~TNtG~D 114 (210)
T 2eng_A 72 FAATSIAGSNEAGWCCACYELTFTSG----PVAGKKMVVQSTSTGGD 114 (210)
T ss_dssp EEEEECTTCCHHHHTTCEEEEEECSG----GGTTCEEEEEEEEC---
T ss_pred eeeeeccCCccccccceeEEEEEcCC----CcCCCEEEEEEecccCC
Confidence 56665321122356999999998663 35689999999998743
No 14
>3nrl_A Uncharacterized protein rumgna_01417; beta protein, structural genomics, PSI-2, protein structure initiative; 1.90A {Ruminococcus gnavus}
Probab=65.73 E-value=4.8 Score=25.98 Aligned_cols=26 Identities=15% Similarity=0.335 Sum_probs=19.4
Q ss_pred CCeEEEechhhhCCcccccceEEEEe
Q 038362 49 GNLFAAAGEGIWDNGASCGRQYKLRC 74 (110)
Q Consensus 49 g~~vaAlS~~lf~nG~~CG~cy~V~C 74 (110)
+.+..-.+...|..|-+||-|+||.-
T Consensus 16 dRydi~~~~~~~ygGlHCGE~feV~v 41 (81)
T 3nrl_A 16 GRYDIRFDLESFYGGLHCGECFDVKV 41 (81)
T ss_dssp TEEEEEEETTEECCCCCTTCEEEEEE
T ss_pred CeEEEEeccccccCCcccccEEEEEE
Confidence 44544455666778999999999985
No 15
>3sok_A Fimbrial protein; pilus subunit, extracellular, cell adhesion; 2.30A {Dichelobacter nodosus}
Probab=30.16 E-value=27 Score=23.66 Aligned_cols=16 Identities=13% Similarity=0.227 Sum_probs=11.2
Q ss_pred hHHHHHHHHHHHHhhh
Q 038362 3 QSLVFLCLLAAIFFHH 18 (110)
Q Consensus 3 ~~~~~~~~~~~~l~~~ 18 (110)
++++|++.|+++|..+
T Consensus 4 iEllvviaIigiLaai 19 (151)
T 3sok_A 4 IELMIVVAIIGILAAF 19 (151)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4677888777776644
No 16
>1oqw_A Fimbrial protein; type IV pilin, fiber-forming protein, adhesion, pseudomonas aerugionosa, PAK pilin, cell adhesion; 2.00A {Pseudomonas aeruginosa} SCOP: d.24.1.1
Probab=29.32 E-value=29 Score=23.13 Aligned_cols=16 Identities=13% Similarity=0.183 Sum_probs=10.6
Q ss_pred hHHHHHHHHHHHHhhh
Q 038362 3 QSLVFLCLLAAIFFHH 18 (110)
Q Consensus 3 ~~~~~~~~~~~~l~~~ 18 (110)
++++|++.|+++|..+
T Consensus 4 iEllivi~Ii~il~~i 19 (144)
T 1oqw_A 4 IELMIVVAIIGILAAI 19 (144)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4677777777766643
No 17
>2hi2_A Fimbrial protein; type IV pilin, fiber-forming protein, membrane protein, DNA protein, contractIle protein, cell adhesion; HET: MEA GLA DT6 HTO; 2.30A {Neisseria gonorrhoeae} PDB: 2hil_A* 1ay2_A* 2pil_A*
Probab=29.14 E-value=29 Score=23.34 Aligned_cols=16 Identities=13% Similarity=0.183 Sum_probs=11.3
Q ss_pred hHHHHHHHHHHHHhhh
Q 038362 3 QSLVFLCLLAAIFFHH 18 (110)
Q Consensus 3 ~~~~~~~~~~~~l~~~ 18 (110)
++++|++.|+++|..+
T Consensus 4 iEl~vvi~ii~il~~~ 19 (158)
T 2hi2_A 4 IELMIVIAIVGILAAV 19 (158)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4677887777777654
No 18
>3ixs_B RING1 and YY1-binding protein; RING1B, RYBP, polycomb, E3-ligase, chromosomal protein, TRAN regulation, chromatin regulator; HET: NHE; 1.70A {Homo sapiens}
Probab=21.59 E-value=40 Score=18.46 Aligned_cols=12 Identities=17% Similarity=0.329 Sum_probs=9.7
Q ss_pred CcEEEEEecCCC
Q 038362 86 NTIQIKIVDRAQ 97 (110)
Q Consensus 86 ~sV~V~VtD~CP 97 (110)
+.|+|+|||+=|
T Consensus 22 ~~vTViITe~k~ 33 (37)
T 3ixs_B 22 GNVTVIITDFKE 33 (37)
T ss_dssp TTEEEEEEEEEE
T ss_pred CcEEEEEEeccc
Confidence 589999999754
Done!